Query psy6361
Match_columns 148
No_of_seqs 143 out of 2051
Neff 11.3
Searched_HMMs 29240
Date Sat Aug 17 00:33:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6361.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6361hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a38_A Titin; Z1Z2, structural 99.9 3.1E-21 1.1E-25 120.9 16.2 132 6-146 13-166 (194)
2 3kld_A Contactin 4, axcam, BIG 99.9 1.9E-21 6.6E-26 133.8 15.9 129 8-145 215-353 (384)
3 4fa8_A Secreted protein BARF1; 99.9 1.6E-22 5.3E-27 128.4 8.9 115 7-130 2-147 (203)
4 2wv3_A Neuroplastin; igcam, me 99.9 7E-21 2.4E-25 119.2 15.1 111 13-131 18-136 (190)
5 1rhf_A Tyrosine-protein kinase 99.9 4.9E-21 1.7E-25 119.0 14.1 121 4-133 8-143 (182)
6 2iep_A Muscle-specific kinase 99.9 1E-20 3.6E-25 118.3 15.0 123 5-136 14-147 (192)
7 2yd6_A PTPRD protein; hydrolas 99.9 4E-20 1.4E-24 117.6 17.5 119 6-133 14-152 (212)
8 2j8h_A Titin, connectin; cardi 99.9 1.2E-20 4E-25 118.6 14.3 125 6-138 12-153 (197)
9 2c5d_C AXL oncogene, tyrosine- 99.9 1.1E-20 3.9E-25 118.6 14.0 121 5-134 9-152 (195)
10 3lcy_A Titin; A-BAND, IG tande 99.9 2.9E-20 9.9E-25 116.5 15.7 124 6-137 15-151 (197)
11 2rik_A Titin; I-SET IG fold, p 99.9 2.9E-20 9.9E-25 122.8 16.4 121 8-137 109-240 (284)
12 2yd1_A Tyrosine-protein phosph 99.9 6.4E-20 2.2E-24 116.6 17.0 118 6-132 14-153 (212)
13 2rik_A Titin; I-SET IG fold, p 99.9 8.3E-20 2.9E-24 120.6 17.9 123 7-137 14-147 (284)
14 3b43_A Titin; I-SET IG fold, e 99.9 2E-20 6.9E-25 134.5 16.1 120 9-137 302-432 (570)
15 3p3y_A Neurofascin; IG domains 99.8 5.2E-20 1.8E-24 126.8 15.0 119 7-134 231-357 (404)
16 1epf_A NCAM, protein (neural c 99.8 7.1E-20 2.4E-24 114.4 14.0 118 6-132 10-143 (191)
17 2jll_A NCAM2, neural cell adhe 99.8 1E-19 3.4E-24 125.0 16.0 119 7-134 9-145 (389)
18 1cs6_A Axonin-1; neural cell a 99.8 7.1E-20 2.4E-24 125.5 15.0 130 7-145 216-352 (382)
19 2v5t_A NCAM2, N-CAM 2, neural 99.8 1.5E-19 5.2E-24 112.6 15.1 123 6-137 10-146 (189)
20 3k0w_A Mucosa-associated lymph 99.8 8.2E-20 2.8E-24 116.8 13.9 121 6-135 26-164 (218)
21 3laf_A Deleted in colorectal c 99.8 9.5E-20 3.2E-24 125.5 14.6 121 8-137 231-360 (403)
22 2va4_A NCAM2, N-CAM 2, neural 99.8 6.1E-19 2.1E-23 110.1 16.7 116 7-132 13-139 (192)
23 2r15_A Myomesin-1; sarcomeric 99.8 5.3E-19 1.8E-23 112.1 16.4 119 12-137 16-165 (212)
24 2v5m_A Dscam; neurobiology SPL 99.8 1E-19 3.5E-24 124.9 13.6 117 8-133 222-351 (388)
25 2v44_A NCAM2, neural cell adhe 99.8 2.1E-19 7.2E-24 112.2 13.8 117 5-131 9-138 (189)
26 3b43_A Titin; I-SET IG fold, e 99.8 1.9E-19 6.3E-24 129.5 15.2 122 8-137 207-339 (570)
27 3rbs_A Myomesin-1; immunoglobu 99.8 9.7E-19 3.3E-23 111.2 15.9 128 7-146 11-178 (207)
28 1bih_A Hemolin; insect immunit 99.8 3.5E-19 1.2E-23 122.4 14.3 118 7-133 221-353 (395)
29 1vca_A VCAM-D1,2, human vascul 99.8 2E-19 7E-24 113.9 12.1 116 8-132 11-137 (202)
30 2nzi_A Titin; IG-domain, FNIII 99.8 4.6E-19 1.6E-23 118.1 13.7 124 6-137 12-152 (305)
31 2yd9_A Receptor-type tyrosine- 99.8 7.9E-19 2.7E-23 117.1 14.4 119 6-133 14-152 (304)
32 1f97_A Junction adhesion molec 99.8 1.5E-19 5.2E-24 114.4 10.5 119 5-132 8-149 (212)
33 3grw_A Fibroblast growth facto 99.8 2.1E-18 7.1E-23 111.4 15.6 120 7-134 24-163 (241)
34 1qz1_A Neural cell adhesion mo 99.8 1.2E-18 4.2E-23 115.2 14.7 119 6-132 10-143 (291)
35 3sgj_C Human FCG3A receptor; r 99.8 4.7E-19 1.6E-23 112.4 12.1 113 8-131 17-131 (204)
36 3mj8_L Stimulatory hamster ant 99.8 7.5E-19 2.6E-23 111.6 12.5 117 7-132 9-159 (213)
37 2yd9_A Receptor-type tyrosine- 99.8 6.3E-19 2.2E-23 117.6 12.6 119 8-135 118-251 (304)
38 3qs7_E FL cytokine receptor; i 99.8 3.7E-19 1.3E-23 124.1 11.4 116 7-134 236-371 (423)
39 3ojm_B Fibroblast growth facto 99.8 3E-18 1E-22 109.8 14.7 120 6-133 27-166 (231)
40 1fnl_A Low affinity immunoglob 99.8 1.1E-18 3.6E-23 108.0 12.2 113 8-131 17-131 (175)
41 2wim_A N-CAM 2, NCAM2, neural 99.8 2.4E-18 8.2E-23 113.9 14.0 132 6-146 106-255 (291)
42 3nl4_L Antigen binding fragmen 99.8 5.6E-19 1.9E-23 112.2 10.6 118 6-132 9-158 (213)
43 2if7_A SLAM family member 6; N 99.8 7E-18 2.4E-22 106.0 15.4 123 1-134 1-155 (193)
44 1nbq_A JAM, junctional adhesio 99.8 4.6E-20 1.6E-24 116.6 5.2 120 5-133 11-152 (209)
45 1qz1_A Neural cell adhesion mo 99.8 2.2E-18 7.4E-23 114.1 13.0 120 7-134 109-241 (291)
46 2vr9_A Roundabout 1, ROBO; imm 99.8 1.4E-18 4.7E-23 110.6 11.6 117 6-131 17-151 (217)
47 1hng_A CD2; T lymphocyte adhes 99.8 5.4E-18 1.9E-22 105.1 14.0 117 6-136 4-142 (176)
48 2d3v_A Leukocyte immunoglobuli 99.8 1.1E-18 3.6E-23 109.9 10.8 111 9-131 15-140 (196)
49 3s97_C Contactin-1; carbonic a 99.8 5.1E-18 1.7E-22 106.5 13.7 120 5-133 15-157 (201)
50 1itb_B Type 1 interleukin-1 re 99.8 4E-18 1.4E-22 114.0 14.0 119 7-134 112-254 (315)
51 3b5h_A Cervical EMMPRIN, HAB18 99.8 1.2E-17 4E-22 103.8 15.1 109 5-125 5-120 (184)
52 1ugn_A LIR1, leukocyte immunog 99.8 1.7E-18 5.7E-23 109.1 11.2 113 8-132 14-142 (198)
53 2ec8_A MAST/stem cell growth f 99.8 3.6E-18 1.2E-22 121.6 13.9 120 7-134 220-359 (524)
54 1f2q_A High affinity immunoglo 99.8 6.1E-19 2.1E-23 109.2 8.8 114 8-132 14-129 (176)
55 1gsm_A Madcam-1, mucosal addre 99.8 2.9E-18 9.8E-23 108.8 11.9 115 8-132 17-142 (210)
56 3sbw_C Programmed cell death 1 99.8 5E-18 1.7E-22 108.3 13.3 125 2-131 5-159 (222)
57 3bp6_B Programmed cell death 1 99.8 1.2E-18 4.1E-23 109.9 10.2 124 3-131 7-145 (202)
58 3jz7_A MCAR, CAR, coxsackievir 99.8 2.3E-18 7.9E-23 109.0 11.5 120 3-127 5-160 (214)
59 3r4d_A CEA-related cell adhesi 99.8 2.1E-17 7.1E-22 104.5 15.7 119 7-137 8-157 (208)
60 3oq3_B IFN-alpha/beta binding 99.8 6.2E-18 2.1E-22 114.1 14.0 111 10-130 140-273 (329)
61 2v9r_A Roundabout homolog 1; p 99.8 6.6E-18 2.2E-22 106.9 13.0 120 6-134 17-157 (212)
62 2pet_A Lutheran blood group gl 99.8 6.3E-18 2.1E-22 108.4 12.6 120 6-134 8-165 (231)
63 3p2t_A Leukocyte immunoglobuli 99.8 4.7E-18 1.6E-22 106.9 11.6 112 9-132 15-141 (196)
64 3ejj_X Macrophage colony-stimu 99.8 6.5E-18 2.2E-22 111.6 12.4 119 6-132 97-230 (289)
65 4f80_A Butyrophilin subfamily 99.8 2.9E-18 1E-22 110.0 10.2 119 3-129 9-159 (226)
66 1jbj_A CD3 epsilon and gamma e 99.8 9E-19 3.1E-23 109.5 7.0 112 8-132 9-147 (186)
67 3qs7_E FL cytokine receptor; i 99.8 6.2E-18 2.1E-22 117.9 11.6 114 7-130 57-180 (423)
68 2gi7_A GPVI protein; IG-like d 99.8 4.4E-18 1.5E-22 106.1 9.8 112 9-132 18-135 (184)
69 3s96_B 3B5H10 FAB light chain; 99.8 8.6E-18 2.9E-22 107.0 11.3 117 7-132 9-166 (218)
70 2y25_A Myomesin; structural pr 99.8 1.2E-17 4.1E-22 111.6 12.4 120 10-137 110-270 (317)
71 3d9a_L Light chain of hyhel10 99.8 1.1E-17 3.7E-22 106.3 11.5 119 6-133 9-158 (213)
72 4dep_C Interleukin-1 receptor 99.8 1.4E-17 4.6E-22 113.0 12.6 140 5-145 14-183 (349)
73 2fbo_J V1V2;, variable region- 99.8 1.1E-17 3.7E-22 108.5 11.6 121 4-132 8-179 (250)
74 3laf_A Deleted in colorectal c 99.8 5.5E-17 1.9E-21 111.7 15.8 120 6-134 129-266 (403)
75 1uct_A Immunoglobulin alpha FC 99.8 5.5E-18 1.9E-22 108.5 9.7 114 8-132 18-148 (218)
76 3r06_A Anti-mouse CD3epsilon a 99.8 3.3E-18 1.1E-22 108.6 8.6 118 6-132 9-157 (213)
77 3tv3_L PGT128 light chain, IG 99.8 1.1E-17 3.8E-22 106.1 10.7 115 7-132 9-156 (211)
78 1dr9_A B7-1 (CD80), T lymphocy 99.8 3.9E-17 1.3E-21 102.9 13.1 113 7-132 3-150 (201)
79 3ry4_A Low affinity immunoglob 99.8 2.1E-17 7.3E-22 101.4 11.5 114 8-132 14-129 (170)
80 4dep_C Interleukin-1 receptor 99.8 5.5E-18 1.9E-22 114.9 9.5 117 7-132 129-273 (349)
81 2wng_A Tyrosine-protein phosph 99.8 7E-18 2.4E-22 113.6 9.8 120 5-132 10-162 (327)
82 3qs9_E FL cytokine receptor; i 99.8 6.1E-18 2.1E-22 120.8 10.0 117 7-134 236-371 (527)
83 2y23_A Myomesin; structural pr 99.8 2.3E-17 8E-22 110.0 12.3 122 7-138 10-157 (312)
84 2wim_A N-CAM 2, NCAM2, neural 99.8 2.1E-17 7.1E-22 109.3 11.9 118 5-132 11-141 (291)
85 1e07_A Carcinoembryonic antige 99.7 4E-17 1.4E-21 118.6 14.1 117 8-134 477-604 (642)
86 1oll_A NK receptor; immune sys 99.7 2.5E-17 8.7E-22 103.0 11.4 111 9-131 14-139 (188)
87 1ry7_B FGFR-3, fibroblast grow 99.7 6.9E-18 2.4E-22 113.7 9.0 118 8-133 133-270 (334)
88 3dmk_A DOWN syndrome cell adhe 99.7 3.5E-17 1.2E-21 121.8 13.5 118 7-133 257-387 (816)
89 3dmk_A DOWN syndrome cell adhe 99.7 4.9E-17 1.7E-21 121.0 14.0 121 8-137 353-477 (816)
90 4frw_A Poliovirus receptor-rel 99.7 2E-17 6.7E-22 104.7 10.3 122 5-132 6-161 (218)
91 1wio_A CD4, T-cell surface gly 99.7 1.3E-17 4.4E-22 113.8 9.9 113 8-132 106-224 (363)
92 1lk3_L 9D7 light chain; antige 99.7 1.8E-17 6E-22 105.2 9.9 119 6-133 8-157 (210)
93 3pv7_A B7-H6, IG-like domain-c 99.7 1.8E-16 6.1E-21 102.9 14.6 117 7-128 12-159 (248)
94 2ifg_A High affinity nerve gro 99.7 2.9E-18 9.9E-23 116.6 6.2 116 7-135 167-292 (347)
95 2y25_A Myomesin; structural pr 99.7 7.7E-19 2.6E-23 117.4 2.8 131 7-146 15-171 (317)
96 1nkr_A P58-CL42 KIR; inhibitor 99.7 8.6E-17 2.9E-21 101.5 11.9 113 8-132 17-149 (201)
97 3rjd_A High affinity immunoglo 99.7 7.8E-17 2.7E-21 105.0 11.9 115 7-132 10-126 (262)
98 2y23_A Myomesin; structural pr 99.7 1.9E-16 6.4E-21 105.6 13.9 128 7-146 116-283 (312)
99 1q0x_L FAB 9B1, light chain; a 99.7 1.9E-17 6.4E-22 105.1 8.5 119 6-133 8-161 (212)
100 3u83_A Poliovirus receptor-rel 99.7 2.4E-17 8.4E-22 110.9 9.3 128 9-144 143-288 (331)
101 3o4o_C Interleukin-1 receptor 99.7 1.1E-17 3.9E-22 113.0 7.6 119 6-133 26-169 (339)
102 3sob_L Antibody light chain; b 99.7 3.5E-17 1.2E-21 105.4 9.4 117 7-132 33-180 (237)
103 2rcj_C Light chain; immunoglob 99.7 1.3E-16 4.4E-21 113.6 12.9 119 6-133 8-160 (523)
104 4dzb_B Vbeta2 (MAIT T cell rec 99.7 5.1E-17 1.7E-21 105.4 9.9 119 6-132 9-170 (246)
105 1e07_A Carcinoembryonic antige 99.7 3.3E-16 1.1E-20 113.9 15.0 128 8-146 391-527 (642)
106 2ny1_B T-cell surface glycopro 99.7 5.5E-17 1.9E-21 100.9 9.4 107 7-130 4-138 (184)
107 3pl6_D MBP peptide / T-cell re 99.7 5.9E-17 2E-21 106.4 9.9 118 6-132 34-191 (268)
108 3esu_F Antibody 14B7* light ch 99.7 9.9E-17 3.4E-21 104.2 10.6 112 6-126 12-170 (250)
109 2o26_X MAST/stem cell growth f 99.7 1.3E-16 4.5E-21 105.6 11.1 114 7-130 100-230 (290)
110 3p3y_A Neurofascin; IG domains 99.7 9.4E-17 3.2E-21 110.5 10.7 114 8-129 27-157 (404)
111 3rjd_A High affinity immunoglo 99.7 3.4E-16 1.2E-20 102.0 12.8 115 8-132 92-218 (262)
112 2xzc_L FAB A.17 light chain; i 99.7 8.3E-17 2.8E-21 102.5 9.2 119 6-133 8-160 (216)
113 3qs9_E FL cytokine receptor; i 99.7 1.3E-16 4.4E-21 114.0 11.0 106 8-130 336-448 (527)
114 2x1w_L Vascular endothelial gr 99.7 1.5E-16 5E-21 101.3 10.1 116 6-130 15-148 (213)
115 3oq3_B IFN-alpha/beta binding 99.7 3.5E-17 1.2E-21 110.4 7.5 124 6-131 37-171 (329)
116 2o26_X MAST/stem cell growth f 99.7 2.4E-16 8.1E-21 104.4 11.4 115 5-136 19-139 (290)
117 1nfd_E H57 FAB; complex (immun 99.7 5.1E-17 1.7E-21 103.1 7.8 119 6-133 7-159 (212)
118 1c1e_H Catalytic antibody 1E9 99.7 3.5E-17 1.2E-21 104.4 6.9 115 7-130 9-167 (219)
119 1ry7_B FGFR-3, fibroblast grow 99.7 5.6E-18 1.9E-22 114.2 3.2 120 6-134 16-168 (334)
120 4fqp_A Poliovirus receptor; im 99.7 5.2E-17 1.8E-21 108.7 7.9 129 10-146 129-275 (313)
121 2v5m_A Dscam; neurobiology SPL 99.7 1.4E-16 4.6E-21 109.3 10.1 115 8-131 14-148 (388)
122 1ccz_A Protein (CD58); LFA-3, 99.7 6.1E-16 2.1E-20 95.5 12.1 109 6-134 3-135 (171)
123 3nfj_J T cell receptor beta ch 99.7 9.9E-17 3.4E-21 104.0 8.9 120 5-132 8-169 (245)
124 1moe_A Anti-CEA MAB T84.66; an 99.7 2.8E-16 9.5E-21 101.5 10.9 112 6-126 9-158 (240)
125 2zg1_A Sialic acid-binding IG- 99.7 7E-17 2.4E-21 102.5 7.8 120 6-130 8-168 (214)
126 2c1o_A IGK-C protein; FAB frag 99.7 1.5E-16 5.3E-21 103.5 9.6 119 6-133 46-200 (254)
127 3omz_A Human vdelta1 gamma del 99.7 4.6E-16 1.6E-20 101.7 11.8 113 5-126 9-174 (259)
128 3o3u_N Maltose-binding peripla 99.7 9E-16 3.1E-20 110.5 14.4 117 6-133 374-517 (581)
129 1itb_B Type 1 interleukin-1 re 99.7 1.1E-17 3.8E-22 111.9 4.0 118 7-132 14-152 (315)
130 1z7z_I Intercellular adhesion 99.7 1E-16 3.5E-21 112.0 9.1 130 6-146 7-149 (450)
131 2ocw_A Polymeric-immunoglobuli 99.7 1E-15 3.5E-20 110.1 14.4 118 6-129 8-153 (585)
132 2vol_A Murine IGG FC; FC, zinc 99.7 4.1E-17 1.4E-21 103.5 6.4 114 10-131 15-153 (207)
133 2ocw_A Polymeric-immunoglobuli 99.7 7.8E-16 2.7E-20 110.7 13.3 117 6-132 339-489 (585)
134 3o4o_C Interleukin-1 receptor 99.7 7.2E-17 2.5E-21 109.0 7.5 115 8-131 130-272 (339)
135 1hnf_A CD2; T lymphocyte adhes 99.7 1.6E-15 5.6E-20 94.5 12.8 108 6-130 7-141 (182)
136 2rcj_C Light chain; immunoglob 99.7 6.8E-16 2.3E-20 109.8 12.4 117 9-133 230-367 (523)
137 4ei6_B Vbeta16 XV19 type II na 99.7 3.5E-16 1.2E-20 101.3 10.0 118 6-132 10-169 (245)
138 3ejj_X Macrophage colony-stimu 99.7 4.5E-16 1.5E-20 102.8 10.6 119 6-137 12-139 (289)
139 2ghw_B Anti-SARS SCFV antibody 99.7 4.8E-16 1.6E-20 100.8 10.5 115 7-130 11-178 (247)
140 3bkj_L WO2 IGG2A FAB fragment 99.7 2.6E-16 8.8E-21 102.5 9.2 118 7-133 43-196 (252)
141 3umt_A SCFV heavy chain and li 99.7 5.1E-16 1.8E-20 101.3 10.5 110 8-126 12-175 (256)
142 2rgs_A I, IG gamma-2B heavy ch 99.7 5.7E-17 1.9E-21 103.7 5.8 115 10-131 23-161 (218)
143 2p1y_A Bispecific alpha/beta T 99.7 7.6E-16 2.6E-20 99.3 11.2 112 6-127 8-165 (238)
144 1sy6_A T-cell surface glycopro 99.7 5.7E-16 2E-20 98.1 10.3 109 6-132 11-154 (204)
145 4fom_A Poliovirus receptor-rel 99.7 1.8E-16 6E-21 105.8 8.0 119 7-132 8-158 (308)
146 1nqb_A Single-chain antibody f 99.7 5.2E-16 1.8E-20 101.5 10.0 115 7-130 9-169 (256)
147 1p6f_A NKP46, natural cytotoxi 99.7 1E-15 3.4E-20 99.5 11.2 111 9-131 17-142 (242)
148 2dru_A Chimera of CD48 antigen 99.7 3.3E-15 1.1E-19 92.9 13.1 111 5-131 6-142 (180)
149 1bih_A Hemolin; insect immunit 99.7 9.7E-17 3.3E-21 110.2 6.4 111 6-127 14-139 (395)
150 3knb_B Obscurin-like protein 1 99.7 4.2E-16 1.4E-20 89.1 7.9 76 6-89 21-107 (107)
151 3q5y_A TCR N15 beta; IG, T cel 99.7 4.4E-16 1.5E-20 100.7 9.0 118 6-132 10-167 (240)
152 3bqu_C 3H6 FAB light chain; be 99.7 4.6E-17 1.6E-21 104.7 4.3 118 7-133 32-180 (233)
153 2znx_A SCFV; fluorotryptohpan, 99.7 2.5E-15 8.4E-20 97.4 12.4 112 6-126 9-161 (242)
154 1qgc_4 Protein (immunoglobulin 99.7 3.8E-16 1.3E-20 108.7 9.2 123 6-133 9-162 (438)
155 2ec8_A MAST/stem cell growth f 99.7 1.1E-15 3.7E-20 108.8 11.5 114 7-129 123-252 (524)
156 3eow_R Poliovirus receptor; im 99.7 2.5E-16 8.4E-21 100.6 7.2 117 6-128 7-156 (221)
157 3juy_B 3B3 single chain varian 99.7 2.7E-15 9.1E-20 97.9 12.3 112 5-125 13-186 (256)
158 3ux9_B SCFV antibody; five hel 99.7 1.9E-15 6.5E-20 98.5 11.6 110 7-126 11-173 (256)
159 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 1.4E-15 4.9E-20 99.3 11.0 111 5-125 10-172 (256)
160 4fqp_A Poliovirus receptor; im 99.7 5.5E-16 1.9E-20 103.8 9.1 123 6-132 8-161 (313)
161 1b6u_A KIR2DL3, P58 killer cel 99.7 1.4E-15 4.7E-20 99.6 10.8 113 8-132 16-148 (257)
162 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 3.3E-16 1.1E-20 100.1 7.6 115 7-130 9-170 (222)
163 3gkz_A Anti-methamphetamine si 99.7 1.4E-15 4.7E-20 99.3 10.4 111 8-125 18-178 (257)
164 3v2a_R Vascular endothelial gr 99.6 1E-17 3.4E-22 123.7 0.0 120 8-136 559-713 (772)
165 1cs6_A Axonin-1; neural cell a 99.6 3.2E-15 1.1E-19 102.4 12.3 117 7-131 110-249 (382)
166 1f3r_B FV antibody fragment; I 99.6 1.3E-15 4.5E-20 99.5 9.9 115 7-130 9-182 (257)
167 4fmk_A Poliovirus receptor-rel 99.6 1.9E-15 6.4E-20 96.0 10.4 120 6-131 9-164 (225)
168 3vh8_G Killer cell immunoglobu 99.6 2.3E-15 8E-20 100.9 11.3 112 8-131 33-159 (316)
169 4dkd_C Macrophage colony-stimu 99.6 8.8E-16 3E-20 101.5 9.1 116 7-131 98-229 (292)
170 1z7z_I Intercellular adhesion 99.6 3E-16 1E-20 109.7 7.2 113 8-132 293-413 (450)
171 3mj6_A Junctional adhesion mol 99.6 1.5E-15 5E-20 99.4 9.8 108 5-126 12-158 (268)
172 2j6e_L IGM, FAB light chain; a 99.6 7.9E-17 2.7E-21 103.6 3.6 118 7-132 28-180 (234)
173 1wio_A CD4, T-cell surface gly 99.6 6E-16 2.1E-20 105.6 8.1 105 7-133 185-327 (363)
174 3kld_A Contactin 4, axcam, BIG 99.6 7.3E-16 2.5E-20 106.0 8.1 115 11-133 21-147 (384)
175 3v2a_R Vascular endothelial gr 99.6 5.6E-16 1.9E-20 114.5 7.9 122 8-135 234-376 (772)
176 3to4_D NKT vbeta2 (mouse varia 99.6 1.1E-15 3.7E-20 99.7 8.4 119 6-132 9-169 (253)
177 3uzq_A Anti-dengue MAB 4E11; d 99.6 2.2E-15 7.5E-20 98.2 9.6 111 7-126 10-174 (253)
178 3qib_D 2B4 beta chain; IG doma 99.6 1.3E-15 4.4E-20 100.1 8.5 117 7-132 36-194 (270)
179 3auv_A SC-DSFV derived from th 99.6 1.8E-15 6.1E-20 99.9 9.2 111 7-126 21-173 (276)
180 2oz4_A Intercellular adhesion 99.6 1.3E-15 4.5E-20 99.7 8.5 111 8-130 108-226 (265)
181 1bec_A 14.3.D T cell antigen r 99.6 1.9E-15 6.6E-20 97.7 9.1 120 5-133 6-167 (238)
182 1mju_H Immunoglobulin MS6-12; 99.6 1.6E-15 5.6E-20 97.4 8.6 115 7-130 9-164 (227)
183 1za6_B IGG heavy chain; immuno 99.6 5.3E-16 1.8E-20 105.2 6.5 115 7-130 9-163 (344)
184 4fom_A Poliovirus receptor-rel 99.6 1.5E-16 5.1E-21 106.2 3.8 115 11-133 127-257 (308)
185 1svz_A Immunoglobulin;, single 99.6 4.1E-15 1.4E-19 96.4 10.1 112 6-126 9-166 (247)
186 3knb_A Titin; IG-like, titin, 99.6 2.5E-15 8.4E-20 84.9 7.9 74 5-86 12-98 (100)
187 3d9a_H Heavy chain of hyhel10 99.6 7.2E-16 2.5E-20 97.8 6.3 114 7-130 9-161 (210)
188 1pz5_B Heavy chain of FAB (SYA 99.6 2.5E-15 8.6E-20 95.9 8.9 114 7-129 9-167 (220)
189 2wng_A Tyrosine-protein phosph 99.6 8.5E-16 2.9E-20 103.4 6.9 115 9-132 128-265 (327)
190 3nl4_H Antigen binding fragmen 99.6 4.5E-15 1.5E-19 94.4 9.5 117 7-130 8-163 (215)
191 1qok_A MFE-23 recombinant anti 99.6 5E-15 1.7E-19 98.0 10.0 114 7-130 35-204 (282)
192 1qgc_4 Protein (immunoglobulin 99.6 7.1E-15 2.4E-19 102.3 11.2 111 12-130 130-263 (438)
193 1dee_B IGM RF 2A2; FAB-IBP com 99.6 1.8E-15 6.2E-20 96.9 7.5 116 7-131 9-171 (223)
194 3liz_H 4C3 monoclonal antibody 99.6 6.3E-15 2.2E-19 96.1 10.1 115 7-128 9-165 (253)
195 3vh8_G Killer cell immunoglobu 99.6 3.9E-15 1.3E-19 99.8 9.4 110 10-131 130-259 (316)
196 1op3_H FAB 2G12, heavy chain; 99.6 2.5E-15 8.7E-20 96.3 8.1 114 7-129 9-170 (225)
197 4i0k_A CD276 antigen; immunogl 99.6 1.9E-15 6.4E-20 96.4 7.2 119 7-131 4-154 (222)
198 3bae_H WO2 IGG2A FAB fragment 99.6 1.8E-15 6.1E-20 97.2 7.1 115 7-130 9-173 (228)
199 1i1c_A IGG2A, IG gamma-2A chai 99.6 4.9E-16 1.7E-20 100.7 4.3 114 10-131 29-167 (239)
200 3m8o_H Immunoglobulin A1 heavy 99.6 1.6E-14 5.5E-19 92.3 11.2 116 7-130 9-167 (221)
201 2oz4_A Intercellular adhesion 99.6 1.4E-14 4.8E-19 94.9 11.0 112 8-132 13-137 (265)
202 2fbj_H IGA-kappa J539 FAB (hea 99.6 3.4E-15 1.2E-19 95.5 7.9 114 7-130 9-166 (220)
203 3u83_A Poliovirus receptor-rel 99.6 4.5E-14 1.5E-18 94.9 13.6 117 6-126 22-173 (331)
204 1igt_B IGG2A intact antibody - 99.6 1.8E-15 6.2E-20 105.7 7.0 115 10-131 252-390 (444)
205 2wbj_D OB TCR; transmembrane, 99.6 1.9E-15 6.6E-20 99.8 6.5 118 7-132 33-195 (279)
206 1oga_E TRBC1, T-cell receptor 99.6 7E-15 2.4E-19 95.8 8.7 119 5-132 10-168 (252)
207 2gjj_A A21 single-chain antibo 99.6 2.1E-14 7.3E-19 94.2 10.3 111 7-126 14-177 (264)
208 2aty_A Complement receptor chi 99.6 4.8E-14 1.6E-18 96.9 12.0 116 10-131 180-318 (376)
209 2xqy_G A13-D6.3 monoclonal ant 99.6 1.1E-14 3.8E-19 95.5 8.4 115 7-130 15-172 (261)
210 2wqr_A IG epsilon chain C regi 99.6 6.7E-15 2.3E-19 99.0 7.2 117 10-132 125-264 (323)
211 3bn9_D E2 FAB heavy chain; ant 99.6 7E-15 2.4E-19 96.3 6.9 115 7-130 9-176 (257)
212 2cqv_A MLCK, myosin light chai 99.6 2.9E-14 9.8E-19 82.2 8.7 80 5-92 14-104 (114)
213 1dn0_B IGM-kappa cold agglutin 99.6 6E-14 2E-18 90.4 11.2 117 7-132 9-172 (232)
214 2w59_A IGY FCU3-4; immunoglobu 99.6 3.1E-15 1.1E-19 96.4 5.0 116 10-133 25-164 (231)
215 1l6x_A Immunoglobulin gamma-1 99.6 1.2E-14 4E-19 92.1 7.5 114 11-131 16-153 (207)
216 2edj_A Roundabout homolog 2; K 99.6 4.4E-14 1.5E-18 79.5 9.1 75 7-89 17-100 (100)
217 1c5d_H Monoclonal antibody aga 99.6 1.2E-14 4E-19 92.6 7.5 117 7-130 9-165 (215)
218 2kdg_A Myotilin; immonoglobuli 99.6 6.4E-14 2.2E-18 78.7 9.6 76 5-88 12-99 (100)
219 3kvq_A Vascular endothelial gr 99.6 3E-14 1E-18 81.2 8.3 79 5-91 17-104 (108)
220 2eo9_A Roundabout homolog 1; b 99.6 1.4E-14 4.7E-19 84.0 6.8 79 5-91 15-102 (118)
221 1x9q_A SCFV, 4M5.3 anti-fluore 99.5 2.7E-14 9.3E-19 93.8 9.0 116 7-126 24-190 (268)
222 1hxm_B Gamma-delta T-cell rece 99.5 8.6E-15 2.9E-19 94.9 6.5 118 5-130 8-176 (242)
223 2xot_A Amphoterin-induced prot 99.5 3.1E-14 1.1E-18 97.4 9.1 95 7-122 255-360 (361)
224 2e7c_A Myosin-binding protein 99.5 5.4E-14 1.8E-18 81.5 8.8 76 6-89 32-117 (118)
225 1hzh_H IGG, immunoglobulin hea 99.5 1.8E-14 6.2E-19 101.1 7.9 114 7-129 9-174 (457)
226 2gki_A Nuclease; anti-DNA anti 99.5 4.4E-14 1.5E-18 93.9 9.4 111 7-126 31-202 (291)
227 1wit_A Twitchin 18TH IGSF modu 99.5 3.6E-14 1.2E-18 78.8 7.5 73 5-85 9-92 (93)
228 2kkq_A Myotilin; unknown funct 99.5 8E-14 2.7E-18 80.7 9.0 79 5-91 22-113 (116)
229 3mjg_X Beta-type platelet-deri 99.5 1E-13 3.5E-18 91.6 10.6 109 8-130 105-222 (289)
230 4dkd_C Macrophage colony-stimu 99.5 2.6E-15 9.1E-20 99.2 3.0 115 6-133 12-135 (292)
231 1g1c_A Immunoglobulin-like dom 99.5 8.5E-14 2.9E-18 78.1 8.6 73 6-86 13-97 (99)
232 2bk8_A Connectin, M1, titin he 99.5 9.5E-14 3.3E-18 77.7 8.1 76 3-86 6-93 (97)
233 3qp3_A Titin; I-SET IG-like, s 99.5 1.3E-13 4.4E-18 77.9 8.6 74 6-87 16-100 (103)
234 3mtr_A N-CAM-1, NCAM-1, neural 99.5 4.4E-13 1.5E-17 85.2 11.5 111 8-129 28-157 (215)
235 1iga_A IGA1; immunoglobulin; N 99.5 7E-14 2.4E-18 98.6 8.5 116 10-133 259-396 (475)
236 3irg_B Obscurin-like protein 1 99.5 1.2E-13 4.2E-18 78.5 8.0 76 6-89 21-107 (107)
237 2ckn_A Basic fibroblast growth 99.5 1.3E-13 4.3E-18 77.0 7.8 72 5-85 16-94 (95)
238 1wwb_X Protein (brain derived 99.5 1.1E-13 3.6E-18 78.5 7.5 73 10-90 13-101 (103)
239 2lu7_A Obscurin-like protein 1 99.5 1.3E-13 4.6E-18 75.2 7.5 70 5-87 3-83 (84)
240 3caf_A Fibroblast growth facto 99.5 1.6E-13 5.6E-18 77.1 8.0 72 6-85 16-99 (100)
241 3s35_X Vascular endothelial gr 99.5 6.8E-14 2.3E-18 81.5 6.6 81 8-94 18-117 (122)
242 2yuz_A Myosin-binding protein 99.5 1.1E-13 3.7E-18 78.1 7.0 74 5-90 14-98 (100)
243 3cx2_A Myosin-binding protein 99.5 2.3E-13 7.8E-18 77.7 8.3 73 6-86 12-107 (108)
244 2yr3_A Myosin light chain kina 99.5 4.6E-14 1.6E-18 79.3 5.1 72 6-85 19-98 (99)
245 1igy_B IGG1 intact antibody MA 99.5 1.7E-14 5.8E-19 100.6 3.9 114 7-129 8-161 (434)
246 3mjg_X Beta-type platelet-deri 99.5 1.6E-13 5.5E-18 90.6 8.2 109 5-127 7-132 (289)
247 3fku_X Neutralizing antibody F 99.5 8.6E-14 2.9E-18 92.1 6.7 112 6-125 8-177 (280)
248 1gxe_A Myosin binding protein 99.5 3.5E-13 1.2E-17 80.4 8.5 74 5-86 25-138 (139)
249 2dav_A SLOW MYBP-C, myosin-bin 99.5 3.8E-13 1.3E-17 78.6 8.4 74 6-87 15-111 (126)
250 1u2h_A APEG-1, aortic preferen 99.5 4.7E-13 1.6E-17 75.0 8.6 73 6-86 13-97 (99)
251 1fhg_A Telokin; immunoglobulin 99.5 4.1E-13 1.4E-17 81.4 8.9 80 7-94 50-141 (154)
252 2cr3_A Basic fibroblast growth 99.5 2.5E-13 8.6E-18 76.3 7.4 74 5-87 10-90 (99)
253 1ypz_F T-cell receptor gamma c 99.5 6.3E-14 2.1E-18 90.2 5.5 119 5-131 8-175 (230)
254 2dm2_A Palladin; beta-sandwich 99.5 3.6E-13 1.2E-17 77.0 8.2 76 6-89 16-104 (110)
255 1he7_A High affinity nerve gro 99.5 2.6E-13 8.9E-18 79.3 7.5 74 10-91 12-103 (126)
256 3puc_A Titin; I-SET IG-like do 99.5 5.3E-13 1.8E-17 74.7 8.6 73 6-86 14-97 (99)
257 3rbg_A Cytotoxic and regulator 99.5 7.1E-13 2.4E-17 77.5 9.4 82 2-92 5-106 (124)
258 2dm3_A KIAA0992 protein, palla 99.5 1.6E-13 5.5E-18 78.4 6.5 77 6-90 17-105 (110)
259 3qhz_H Human monoclonal antibo 99.5 1.2E-12 4.3E-17 84.1 11.1 117 7-128 9-173 (232)
260 3irg_A Titin; IG-like, titin, 99.5 4.4E-13 1.5E-17 75.1 7.9 74 5-86 12-98 (100)
261 1gl4_B Basement membrane-speci 99.5 3.7E-13 1.3E-17 75.4 7.5 73 6-86 18-97 (98)
262 1hzh_H IGG, immunoglobulin hea 99.5 1.7E-13 6E-18 96.1 7.5 117 10-131 261-399 (457)
263 3tv3_H PGT128 heavy chain, IG 99.5 8.5E-13 2.9E-17 85.4 10.0 118 7-129 9-182 (239)
264 3u2s_H PG9 heavy chain; greek 99.4 1.2E-12 4.1E-17 85.2 10.6 116 7-129 8-183 (248)
265 1igt_B IGG2A intact antibody - 99.4 1.6E-13 5.4E-18 95.9 6.7 114 10-132 135-287 (444)
266 1iga_A IGA1; immunoglobulin; N 99.4 1.7E-12 5.8E-17 91.5 11.9 116 6-129 9-169 (475)
267 4hwu_A Fibroblast growth facto 99.4 7.1E-13 2.4E-17 73.8 7.9 75 5-89 8-89 (95)
268 1nct_A Titin; cell adhesion, g 99.4 1.6E-13 5.6E-18 78.1 4.6 73 6-86 22-105 (106)
269 1za6_B IGG heavy chain; immuno 99.4 1.1E-13 3.8E-18 93.8 4.2 113 10-131 132-286 (344)
270 3bfo_A Mucosa-associated lymph 99.4 4.4E-13 1.5E-17 74.1 5.8 71 7-85 12-85 (91)
271 1mq8_A ICAM-1, intercellular a 99.4 9.6E-14 3.3E-18 92.3 3.5 119 9-133 97-235 (291)
272 3shs_A HOC head outer capsid p 99.4 1.7E-11 5.8E-16 79.7 13.6 118 9-133 13-144 (304)
273 4acp_A IG gamma-1 chain C regi 99.4 2.4E-13 8.4E-18 88.1 5.0 113 11-131 37-174 (240)
274 1ow0_A IG alpha-1 chain C regi 99.4 1.5E-14 5.1E-19 92.2 -0.9 117 9-133 15-153 (214)
275 2edn_A Myosin-binding protein 99.4 7.7E-13 2.6E-17 76.5 6.4 74 6-87 20-116 (118)
276 3m45_A Cell adhesion molecule 99.4 1.8E-12 6.3E-17 73.6 8.0 75 6-89 14-108 (108)
277 1igy_B IGG1 intact antibody MA 99.4 2.4E-15 8.4E-20 104.8 -5.0 116 10-131 242-380 (434)
278 1iam_A ICAM-1, CD54, intercell 99.4 1.7E-11 5.9E-16 76.2 12.8 116 7-132 8-132 (185)
279 2wqr_A IG epsilon chain C regi 99.4 1.3E-13 4.4E-18 92.7 3.4 111 14-130 25-159 (323)
280 2eny_A Obscurin; beta-sandwich 99.4 1.8E-12 6.1E-17 73.5 6.8 75 5-90 15-100 (104)
281 1ypz_E T cell receptor delta, 99.4 5.7E-12 1.9E-16 79.9 9.9 113 6-131 9-160 (207)
282 1x44_A Myosin-binding protein 99.4 4.7E-12 1.6E-16 71.5 7.7 73 5-90 14-99 (103)
283 1zvo_C Myeloma immunoglobulin 99.3 1.6E-11 5.4E-16 87.6 11.7 113 10-133 309-447 (512)
284 1wwc_A Protein (NT-3 growth fa 99.3 5.7E-12 2E-16 72.9 7.6 70 14-91 21-105 (118)
285 1waa_A Titin; metal binding pr 99.3 5.8E-12 2E-16 70.0 7.3 69 5-86 12-91 (93)
286 2yuv_A Myosin-binding protein 99.3 1.3E-11 4.5E-16 69.3 8.4 69 8-89 18-97 (100)
287 3f8u_B Tapasin; endoplasmic re 99.3 8.6E-12 2.9E-16 85.8 8.8 121 6-127 166-335 (401)
288 2cr6_A KIAA1556 protein, obscu 99.3 2.6E-12 9E-17 74.1 5.3 77 6-94 21-109 (115)
289 2edf_A Obscurin; beta-sandwich 99.3 4.2E-12 1.4E-16 71.7 5.9 72 6-90 16-98 (103)
290 2e6p_A Obscurin-like protein 1 99.3 9.7E-12 3.3E-16 70.3 7.3 70 8-90 20-100 (104)
291 4gos_A V-SET domain-containing 99.3 7E-12 2.4E-16 73.4 6.5 76 5-85 12-118 (125)
292 2ens_A Advanced glycosylation 99.3 1.3E-12 4.4E-17 72.9 3.3 71 7-85 19-93 (96)
293 2ny1_B T-cell surface glycopro 99.3 1.3E-11 4.4E-16 76.5 8.1 75 8-90 107-182 (184)
294 3c6l_A TCR 2W20 alpha chain; T 99.0 2.3E-13 7.8E-18 84.9 0.0 116 5-134 7-155 (185)
295 2cpc_A KIAA0657 protein; immun 99.3 1.4E-11 4.8E-16 70.6 7.5 74 8-94 23-107 (113)
296 2k1m_A Myosin-binding protein 99.3 2.6E-11 9E-16 67.4 8.4 69 5-86 15-94 (95)
297 3rbs_A Myomesin-1; immunoglobu 99.3 3.7E-12 1.3E-16 80.8 5.3 69 8-84 126-204 (207)
298 2lvc_A Obscurin-like protein 1 99.3 7.6E-12 2.6E-16 69.2 5.9 56 8-72 16-82 (91)
299 3n9g_H FAB fragment of MAB CR4 99.3 1.5E-11 5E-16 79.1 8.0 115 7-130 9-169 (230)
300 2r15_A Myomesin-1; sarcomeric 99.3 3.9E-11 1.4E-15 75.6 9.6 73 7-87 126-210 (212)
301 2nzi_A Titin; IG-domain, FNIII 99.3 2.2E-11 7.5E-16 80.9 8.7 114 7-128 113-250 (305)
302 2edk_A Myosin-binding protein 99.3 2E-12 6.7E-17 72.9 3.0 71 6-89 16-101 (101)
303 2v9t_A Roundabout homolog 1; s 99.3 2E-11 6.7E-16 70.4 7.3 74 6-87 17-109 (117)
304 1z9m_A GAPA225; nectin-like, I 99.3 1.8E-11 6.1E-16 73.3 7.3 78 5-91 45-142 (145)
305 3so5_A LIG-3, leucine-rich rep 99.3 1.3E-11 4.5E-16 70.2 6.4 73 7-85 19-111 (112)
306 2dlt_A Myosin binding protein 99.3 9.5E-12 3.3E-16 70.6 5.7 60 5-73 15-85 (106)
307 3sob_H Antibody heavy chain, l 99.3 1.7E-11 6E-16 79.9 7.7 114 8-130 33-195 (256)
308 2v9r_A Roundabout homolog 1; p 99.3 1.4E-11 4.7E-16 77.7 6.9 80 7-94 120-209 (212)
309 3iu4_H CHP3 FAB heavy chain; a 99.3 8.4E-12 2.9E-16 81.9 5.9 110 7-123 9-163 (263)
310 2yd6_A PTPRD protein; hydrolas 99.3 1.9E-11 6.4E-16 77.4 7.3 76 8-91 118-208 (212)
311 2x1w_L Vascular endothelial gr 99.3 2.6E-11 8.8E-16 77.0 7.8 78 9-92 116-212 (213)
312 2edh_A Obscurin; structural ge 99.3 5.1E-11 1.8E-15 68.3 8.4 71 6-90 27-108 (113)
313 2v5t_A NCAM2, N-CAM 2, neural 99.3 3.9E-11 1.3E-15 74.3 8.5 71 8-86 108-187 (189)
314 3mlr_H Human monoclonal anti-H 99.3 8E-12 2.7E-16 80.1 5.4 110 7-123 9-165 (226)
315 3s97_C Contactin-1; carbonic a 99.3 4.7E-11 1.6E-15 74.6 8.9 72 7-86 122-200 (201)
316 3bn3_B ICAM-5, intercellular a 99.2 1.5E-10 5.2E-15 72.5 10.8 117 7-132 11-135 (196)
317 2iep_A Muscle-specific kinase 99.2 2.8E-11 9.5E-16 75.2 7.1 75 7-89 109-192 (192)
318 2jll_A NCAM2, neural cell adhe 99.2 4E-10 1.4E-14 77.2 13.5 111 8-128 110-239 (389)
319 2eo1_A OBSCN protein, cDNA FLJ 99.2 3.6E-11 1.2E-15 67.6 6.7 71 6-89 19-100 (102)
320 1zvo_C Myeloma immunoglobulin 99.2 1.1E-10 3.6E-15 83.3 10.5 111 13-131 150-341 (512)
321 2cry_A KIN of IRRE-like protei 99.2 1.6E-12 5.5E-17 75.7 0.9 74 7-87 22-113 (122)
322 3q0h_A T cell immunoreceptor w 99.2 1.2E-10 4.2E-15 67.3 8.9 80 7-92 12-113 (117)
323 2e7b_A Obscurin; IG-like domai 99.2 4.2E-11 1.4E-15 67.5 6.6 73 5-90 15-98 (103)
324 1hxm_A Gamma-delta T-cell rece 99.2 1.3E-10 4.6E-15 74.7 9.6 117 6-132 9-162 (229)
325 1xau_A B- and T-lymphocyte att 99.2 7.5E-11 2.6E-15 66.0 7.1 74 5-86 21-115 (122)
326 3jz7_A MCAR, CAR, coxsackievir 99.2 2.3E-11 7.9E-16 76.6 5.8 72 9-88 132-213 (214)
327 3udw_C Poliovirus receptor; PV 99.2 1.1E-10 3.8E-15 67.0 8.1 78 8-89 10-118 (118)
328 2dku_A KIAA1556 protein; beta- 99.2 9.8E-11 3.4E-15 65.9 7.7 73 5-90 15-98 (103)
329 2id5_A Lingo-1, leucine rich r 99.2 9E-11 3.1E-15 82.8 9.2 73 6-86 393-476 (477)
330 2j8h_A Titin, connectin; cardi 99.2 7E-11 2.4E-15 73.7 7.7 73 6-86 112-196 (197)
331 1fnl_A Low affinity immunoglob 99.2 6.4E-11 2.2E-15 72.9 7.1 72 8-86 98-173 (175)
332 2v44_A NCAM2, neural cell adhe 99.2 1.6E-10 5.3E-15 71.7 8.9 66 7-80 105-180 (189)
333 2yd1_A Tyrosine-protein phosph 99.2 5.5E-11 1.9E-15 75.2 6.9 73 8-88 120-201 (212)
334 2dm7_A KIAA1556 protein; beta- 99.2 1.2E-10 4.1E-15 66.2 7.5 71 5-89 15-96 (108)
335 3sgj_C Human FCG3A receptor; r 99.2 5.1E-11 1.7E-15 75.3 6.4 75 8-89 98-176 (204)
336 2a38_A Titin; Z1Z2, structural 99.2 9.5E-11 3.2E-15 72.9 7.6 70 8-85 113-193 (194)
337 2qsq_A Carcinoembryonic antige 99.2 3.7E-10 1.3E-14 64.6 9.3 72 8-87 10-109 (111)
338 3rgv_A YAE62 TCR A chain; TCR, 99.2 6.8E-11 2.3E-15 74.5 6.7 116 5-134 7-156 (200)
339 2ifg_A High affinity nerve gro 99.2 6.6E-11 2.3E-15 80.4 7.0 74 8-89 256-347 (347)
340 2wv3_A Neuroplastin; igcam, me 99.2 3.8E-10 1.3E-14 70.1 9.7 72 7-86 101-189 (190)
341 1f2q_A High affinity immunoglo 99.2 5.6E-11 1.9E-15 73.1 5.9 75 8-90 95-174 (176)
342 3r4d_A CEA-related cell adhesi 99.2 6.8E-11 2.3E-15 74.4 6.1 73 10-91 122-204 (208)
343 3qr2_A Basigin; CD147, EMMPRIN 99.2 3.2E-11 1.1E-15 71.5 4.3 64 6-77 29-116 (137)
344 1pd6_A Cardiac MYBP-C;, myosin 99.1 2.1E-10 7E-15 64.9 7.4 55 7-70 25-91 (104)
345 3r08_E T-cell surface glycopro 99.1 2.9E-11 9.8E-16 65.2 3.5 59 4-72 5-66 (82)
346 3ojm_B Fibroblast growth facto 99.1 1.8E-10 6E-15 73.4 7.8 78 6-91 126-225 (231)
347 3zyj_A Leucine-rich repeat-con 99.1 2.8E-10 9.4E-15 79.7 9.3 76 6-90 349-436 (440)
348 1epf_A NCAM, protein (neural c 99.1 2.3E-10 7.7E-15 71.0 7.9 65 7-79 109-183 (191)
349 3mj6_A Junctional adhesion mol 99.1 1.2E-10 3.9E-15 76.1 6.8 91 7-106 127-256 (268)
350 4gjt_B Poliovirus receptor-rel 99.1 2E-10 6.8E-15 66.9 7.0 76 6-86 8-116 (123)
351 1eaj_A Coxsackie virus and ade 99.1 3E-10 1E-14 65.8 7.8 80 4-87 11-125 (126)
352 3b5h_A Cervical EMMPRIN, HAB18 99.1 6.3E-10 2.1E-14 68.7 9.5 72 7-86 92-182 (184)
353 1pko_A Myelin oligodendrocyte 99.1 1.8E-10 6E-15 68.4 6.7 78 5-87 13-121 (139)
354 2va4_A NCAM2, N-CAM 2, neural 99.1 3.4E-10 1.2E-14 70.1 8.1 70 8-85 104-191 (192)
355 3grw_A Fibroblast growth facto 99.1 1.6E-10 5.6E-15 74.2 6.5 78 7-92 123-223 (241)
356 3lcy_A Titin; A-BAND, IG tande 99.1 2.9E-10 9.8E-15 70.7 7.3 72 7-86 112-195 (197)
357 2e6q_A Obscurin-like protein 1 99.1 7E-10 2.4E-14 63.5 8.2 73 5-90 15-108 (112)
358 1zox_A CLM-1; IG-superfamily, 99.1 3.9E-10 1.3E-14 64.6 7.1 76 7-89 10-112 (113)
359 4fa8_A Secreted protein BARF1; 99.1 1.8E-10 6.2E-15 72.8 6.1 64 7-78 115-193 (203)
360 3khq_A B-cell antigen receptor 99.1 1.1E-10 3.9E-15 69.0 4.7 78 6-93 25-123 (133)
361 3ry4_A Low affinity immunoglob 99.1 3.2E-10 1.1E-14 69.2 6.8 70 8-85 95-169 (170)
362 3u1s_H FAB PGT145 heavy chain; 99.1 2.9E-10 1E-14 74.6 6.9 114 8-130 33-209 (267)
363 1zxq_A ICAM-2, intercellular a 99.1 5.8E-09 2E-13 65.0 12.2 116 7-132 11-134 (192)
364 3zyi_A Leucine-rich repeat-con 99.1 3.7E-10 1.3E-14 79.3 7.5 75 6-90 360-446 (452)
365 3k0w_A Mucosa-associated lymph 99.1 2.2E-10 7.5E-15 72.9 5.8 73 7-87 127-202 (218)
366 1jhl_L IGG1-kappa D11.15 FV (l 99.1 2.5E-10 8.5E-15 64.9 5.4 61 6-74 9-94 (108)
367 2vr9_A Roundabout 1, ROBO; imm 99.1 6.8E-10 2.3E-14 70.2 7.9 66 7-80 117-199 (217)
368 1ncn_A T lymphocyte activation 99.1 2E-09 6.9E-14 61.2 9.0 71 6-79 2-97 (110)
369 3knb_B Obscurin-like protein 1 99.1 1.2E-09 4.2E-14 62.1 7.8 59 87-146 12-76 (107)
370 1mq8_A ICAM-1, intercellular a 99.1 1.7E-09 5.7E-14 72.0 9.5 116 7-132 8-132 (291)
371 1olz_A Semaphorin 4D; developm 99.0 3.5E-10 1.2E-14 82.6 6.6 101 6-115 541-655 (663)
372 1f97_A Junction adhesion molec 99.0 9.8E-10 3.4E-14 69.0 7.9 71 8-86 114-206 (212)
373 2oyp_A Hepatitis A virus cellu 99.0 1.6E-09 5.5E-14 61.4 8.0 76 6-86 2-107 (109)
374 2fbo_J V1V2;, variable region- 99.0 2.7E-10 9.3E-15 73.5 5.1 61 8-76 146-238 (250)
375 1b6u_A KIR2DL3, P58 killer cel 99.0 2.3E-10 7.9E-15 74.8 4.8 105 9-125 117-238 (257)
376 2ptt_A CD48 antigen; CD244, CD 99.0 2.5E-09 8.5E-14 60.9 8.4 74 4-86 9-107 (110)
377 4i0k_A CD276 antigen; immunogl 99.0 1.5E-09 5E-14 68.9 8.2 78 9-94 121-213 (222)
378 2aw2_A B and T lymphocyte atte 99.0 2.4E-09 8.2E-14 59.3 7.8 73 6-86 19-109 (120)
379 1hng_A CD2; T lymphocyte adhes 99.0 3.5E-10 1.2E-14 69.8 5.0 62 13-82 110-171 (176)
380 1jbj_A CD3 epsilon and gamma e 99.0 3.1E-10 1.1E-14 70.6 4.8 57 9-76 118-178 (186)
381 2edo_A CD48 antigen; beta-sand 99.0 7.9E-10 2.7E-14 64.2 6.1 78 2-87 8-110 (121)
382 2or8_A Hepatitis A virus cellu 99.0 7.6E-10 2.6E-14 63.6 6.0 73 6-85 5-109 (116)
383 2c5d_C AXL oncogene, tyrosine- 99.0 1.2E-09 4E-14 68.1 7.2 69 8-85 116-191 (195)
384 4hwn_A FC receptor-like A; FCR 99.0 4.8E-10 1.6E-14 63.8 5.0 64 9-75 18-84 (108)
385 3uto_A Twitchin; kinase, muscl 99.0 1.5E-09 5.1E-14 78.5 8.4 71 7-85 491-572 (573)
386 3gsn_A RA14 TCR alpha chain (T 99.0 1.9E-10 6.3E-15 72.4 3.2 114 6-133 8-155 (199)
387 3mbe_C I-AG7; T cell receptor, 99.0 3.6E-10 1.2E-14 72.5 4.6 113 6-133 9-156 (229)
388 3tjh_C 42F3 alpha; IG MHC, ant 99.0 8.4E-10 2.9E-14 70.7 6.2 115 7-135 18-170 (226)
389 4ei6_A Valpha1 XV19 type II na 99.0 4E-10 1.4E-14 71.3 4.6 116 7-136 11-163 (208)
390 4frw_A Poliovirus receptor-rel 99.0 4.5E-10 1.5E-14 70.6 4.8 70 8-85 128-209 (218)
391 2bnu_A TCR alpha chain, T-cell 99.0 5.3E-10 1.8E-14 70.6 5.0 102 6-121 8-147 (203)
392 1rhf_A Tyrosine-protein kinase 99.0 3.2E-09 1.1E-13 65.3 8.4 69 8-85 108-181 (182)
393 2vsd_A CHIR AB1; immune system 99.0 7.5E-10 2.6E-14 62.7 5.0 57 9-74 15-79 (105)
394 1ugn_A LIR1, leukocyte immunog 99.0 2.8E-09 9.5E-14 66.7 8.0 59 8-75 110-181 (198)
395 1uct_A Immunoglobulin alpha FC 99.0 2E-09 6.9E-14 68.6 7.2 71 8-86 115-197 (218)
396 2q20_A VK1 O18/O8 germline lig 99.0 1.1E-09 3.7E-14 62.4 5.3 60 6-73 11-95 (109)
397 3knb_A Titin; IG-like, titin, 99.0 1.7E-09 5.8E-14 60.7 6.0 46 88-134 5-50 (100)
398 1ntl_A CRRY-IG; immunology, co 98.9 6.2E-09 2.1E-13 74.9 9.8 117 10-131 355-493 (551)
399 1oll_A NK receptor; immune sys 98.9 1.9E-09 6.4E-14 67.1 6.2 57 9-74 109-172 (188)
400 1nbq_A JAM, junctional adhesio 98.9 5.6E-10 1.9E-14 70.0 3.8 62 8-77 117-197 (209)
401 2q87_A CMRF35-H antigen; all-b 98.9 2.4E-09 8.1E-14 61.0 6.1 77 6-89 4-108 (110)
402 3bp6_B Programmed cell death 1 98.9 2.2E-09 7.7E-14 67.2 6.5 70 9-86 114-192 (202)
403 3qp3_A Titin; I-SET IG-like, s 98.9 2.1E-09 7.2E-14 60.3 5.8 51 87-138 7-57 (103)
404 1sy6_A T-cell surface glycopro 98.9 4.5E-10 1.6E-14 70.9 3.2 65 11-85 126-202 (204)
405 2e27_L Anti-ciguatoxin antibod 98.9 1.6E-09 5.4E-14 62.8 5.1 60 6-73 11-95 (119)
406 2d9c_A Signal-regulatory prote 98.9 8E-09 2.7E-13 61.0 8.3 76 6-89 16-123 (136)
407 1i8k_A Epidermal growth factor 98.9 1.1E-09 3.7E-14 62.2 4.3 60 6-73 9-93 (107)
408 1mqk_L Antibody 7E2 FV fragmen 98.9 2E-09 6.7E-14 62.4 5.3 73 6-86 9-108 (120)
409 2d3v_A Leukocyte immunoglobuli 98.9 2.6E-09 9E-14 66.7 6.2 59 8-75 109-180 (196)
410 1g1c_A Immunoglobulin-like dom 98.9 1E-08 3.6E-13 56.9 8.0 50 87-137 4-53 (99)
411 1lp9_E T-cell receptor alpha c 98.9 1.9E-09 6.4E-14 67.7 5.4 102 6-121 9-148 (194)
412 2v5y_A Receptor-type tyrosine- 98.9 2.8E-09 9.6E-14 78.9 7.0 109 14-132 92-210 (731)
413 1qfw_M FV, antibody (anti beta 98.9 9E-10 3.1E-14 62.6 3.5 60 6-73 9-93 (108)
414 3p2t_A Leukocyte immunoglobuli 98.9 1.8E-09 6E-14 67.5 4.9 58 9-75 110-179 (196)
415 4f80_A Butyrophilin subfamily 98.9 9.4E-09 3.2E-13 65.5 8.4 74 6-87 126-213 (226)
416 4ffy_L DENV1-E111 single chain 98.9 2.5E-09 8.6E-14 62.5 4.9 73 6-86 9-111 (126)
417 1neu_A Myelin P0 protein; stru 98.9 1.9E-08 6.6E-13 58.2 8.5 79 7-89 8-121 (124)
418 3sbw_C Programmed cell death 1 98.9 8.8E-09 3E-13 65.2 7.4 74 9-90 127-214 (222)
419 1p6f_A NKP46, natural cytotoxi 98.9 8.5E-09 2.9E-13 66.8 7.3 71 8-87 111-191 (242)
420 2nms_A CMRF35-like-molecule 1; 98.9 1.6E-08 5.4E-13 58.9 7.8 77 7-90 11-114 (124)
421 1xt5_A Variable region-contain 98.9 9.4E-09 3.2E-13 60.4 6.9 74 5-86 11-132 (135)
422 3puc_A Titin; I-SET IG-like do 98.9 1.7E-08 5.8E-13 56.0 7.6 59 87-146 5-69 (99)
423 3rrq_A Protein PD-1, programme 98.9 2.6E-09 8.7E-14 62.7 4.3 77 6-89 9-117 (129)
424 2c1o_A IGK-C protein; FAB frag 98.9 5.2E-09 1.8E-13 67.8 6.0 65 58-126 11-80 (254)
425 1i3g_L Antibody FV fragment; a 98.9 2.6E-09 8.8E-14 61.0 4.0 60 6-73 12-96 (111)
426 2ywz_A NEW antigen receptor va 98.8 2E-09 6.7E-14 61.5 3.4 59 6-72 8-87 (111)
427 1h5b_A Murine T cell receptor 98.8 8.7E-09 3E-13 58.9 6.1 61 6-75 9-95 (113)
428 1vca_A VCAM-D1,2, human vascul 98.8 8.1E-09 2.8E-13 65.0 6.4 78 8-90 101-200 (202)
429 2ak4_D SB27 T cell receptor al 98.8 7.1E-09 2.4E-13 65.9 6.1 103 6-121 11-151 (211)
430 3uzq_A Anti-dengue MAB 4E11; d 98.8 7.3E-09 2.5E-13 67.2 6.2 81 7-91 142-248 (253)
431 3umt_A SCFV heavy chain and li 98.8 6.2E-09 2.1E-13 67.6 5.8 73 8-88 148-246 (256)
432 1oga_D T-cell receptor alpha c 98.8 7.8E-09 2.7E-13 65.9 6.1 101 6-121 9-144 (215)
433 2q86_A Valpha14 TCR; INKT cell 98.8 3.2E-09 1.1E-13 68.3 4.2 103 6-122 9-145 (229)
434 1waa_A Titin; metal binding pr 98.8 2.6E-08 9E-13 55.0 7.4 58 87-146 4-67 (93)
435 2if7_A SLAM family member 6; N 98.8 2E-08 6.8E-13 62.7 7.7 57 15-79 126-184 (193)
436 1fhg_A Telokin; immunoglobulin 98.8 1.5E-08 5E-13 61.2 6.8 62 84-146 37-105 (154)
437 2gi7_A GPVI protein; IG-like d 98.8 2.7E-09 9.1E-14 66.1 3.6 58 9-75 104-168 (184)
438 2v5y_A Receptor-type tyrosine- 98.8 8.4E-08 2.9E-12 71.1 12.1 98 7-114 173-285 (731)
439 1j05_L T84.66 antibody, anti-C 98.8 3.2E-09 1.1E-13 60.6 3.6 60 6-73 9-97 (111)
440 2yc1_B Single chain antibody f 98.8 5.5E-09 1.9E-13 62.6 4.7 73 7-87 25-123 (146)
441 3r0n_A Poliovirus receptor-rel 98.8 1.3E-08 4.4E-13 59.4 6.1 74 7-84 11-127 (128)
442 2cqv_A MLCK, myosin light chai 98.8 2.3E-08 7.7E-13 57.2 7.0 50 87-137 6-55 (114)
443 1oaq_L Light chain; antibody, 98.8 5.7E-09 2E-13 60.4 4.5 72 8-87 10-110 (120)
444 2kdg_A Myotilin; immonoglobuli 98.8 1.4E-08 4.8E-13 56.5 5.8 48 87-135 4-51 (100)
445 1u2h_A APEG-1, aortic preferen 98.8 4.2E-08 1.4E-12 54.5 7.8 48 87-135 4-51 (99)
446 2zg1_A Sialic acid-binding IG- 98.8 9.6E-09 3.3E-13 64.8 5.7 66 10-83 135-211 (214)
447 1eeq_A Kappa-4 immunoglobulin 98.8 7E-09 2.4E-13 59.4 4.5 66 6-73 9-99 (114)
448 1sq2_N Novel antigen receptor; 98.8 4.5E-09 1.5E-13 60.3 3.7 61 6-72 8-87 (113)
449 2jju_A Signal regulatory prote 98.8 1.6E-08 5.4E-13 59.1 6.1 62 5-74 10-97 (127)
450 1dlf_L Anti-dansyl immunoglobu 98.8 1.1E-08 3.7E-13 58.5 5.2 65 6-73 9-98 (113)
451 2nw2_A ELS4 TCR alpha chain; T 98.8 2.6E-08 8.7E-13 62.8 7.3 101 5-119 6-141 (200)
452 3kg5_A B-cell antigen receptor 98.8 2.3E-08 7.7E-13 59.1 6.6 78 7-93 27-125 (134)
453 2coq_A NEW antigen receptor va 98.8 3.3E-09 1.1E-13 60.3 2.9 61 6-72 8-87 (108)
454 2ghw_B Anti-SARS SCFV antibody 98.8 1.1E-08 3.8E-13 66.0 5.4 71 8-86 145-241 (247)
455 1kgc_D T-cell receptor alpha c 98.8 6.3E-09 2.1E-13 65.9 4.1 102 6-121 7-146 (206)
456 2cr6_A KIAA1556 protein, obscu 98.8 2.5E-09 8.6E-14 61.4 1.9 55 82-137 6-61 (115)
457 3d9a_L Light chain of hyhel10 98.7 1.5E-08 5.1E-13 63.9 5.5 59 12-77 126-203 (213)
458 2yz1_A Tyrosine-protein phosph 98.7 3E-08 1E-12 57.2 6.3 62 5-74 14-101 (120)
459 3kvq_A Vascular endothelial gr 98.7 1.8E-08 6.2E-13 56.9 5.2 54 82-136 4-57 (108)
460 2e6q_A Obscurin-like protein 1 98.7 4E-08 1.4E-12 56.2 6.4 57 88-147 8-80 (112)
461 1f3r_B FV antibody fragment; I 98.7 3.5E-09 1.2E-13 69.0 2.2 59 8-74 149-232 (257)
462 3u6r_L Antibody 1:7 (light cha 98.7 1.4E-08 4.9E-13 60.6 4.7 73 6-86 8-105 (143)
463 1nqb_A Single-chain antibody f 98.7 2.2E-08 7.4E-13 65.2 5.9 76 8-86 131-232 (256)
464 3moq_A NEW antigen receptor va 98.7 9.4E-09 3.2E-13 60.1 3.6 64 6-75 8-90 (126)
465 2p1y_A Bispecific alpha/beta T 98.7 1.3E-08 4.6E-13 65.2 4.7 59 8-74 137-222 (238)
466 3gkz_A Anti-methamphetamine si 98.7 2E-08 6.9E-13 65.2 5.5 73 7-86 150-248 (257)
467 2jjs_C Leukocyte surface antig 98.7 6E-08 2E-12 56.3 6.8 84 6-92 9-120 (127)
468 2kkq_A Myotilin; unknown funct 98.7 8.3E-08 2.8E-12 55.1 7.5 59 87-146 14-80 (116)
469 3irg_B Obscurin-like protein 1 98.7 5.6E-08 1.9E-12 54.7 6.7 50 87-137 12-61 (107)
470 3tf7_C 42F3 MUT7 SCFV (42F3 al 98.7 2.7E-08 9.2E-13 64.7 5.9 60 8-76 147-235 (256)
471 2or7_A T-cell immunoglobulin a 98.7 3.8E-08 1.3E-12 56.4 5.8 74 6-86 5-109 (115)
472 2eys_A NKT15; natural killer T 98.7 4.4E-08 1.5E-12 62.2 6.5 99 7-119 12-147 (210)
473 2pkd_A SLAM family member 5; s 98.7 1.4E-07 4.9E-12 53.8 8.1 75 5-86 6-109 (111)
474 1n26_A IL-6 receptor alpha cha 98.7 8.6E-08 3E-12 64.5 8.2 74 7-90 15-96 (325)
475 2lu7_A Obscurin-like protein 1 98.7 4.3E-08 1.5E-12 53.1 5.4 49 97-146 4-58 (84)
476 3juy_B 3B3 single chain varian 98.7 3.2E-08 1.1E-12 64.3 5.8 61 7-75 158-244 (256)
477 1pew_A JTO2, A lambda-6 type i 98.7 1.5E-08 5.1E-13 57.6 3.7 60 6-73 8-94 (109)
478 2yuz_A Myosin-binding protein 98.7 4.6E-08 1.6E-12 54.7 5.6 56 88-146 7-68 (100)
479 3bj9_1 Immunoglobulin IOTA cha 98.7 8.4E-08 2.9E-12 55.0 6.9 59 7-73 7-99 (116)
480 2yr3_A Myosin light chain kina 98.7 4.3E-08 1.5E-12 54.5 5.5 60 86-146 9-71 (99)
481 1u3h_A T-cell receptor alpha-c 98.1 2.1E-09 7.2E-14 61.3 0.0 61 5-73 6-93 (110)
482 1wit_A Twitchin 18TH IGSF modu 98.7 4.1E-08 1.4E-12 54.0 5.3 45 88-133 2-48 (93)
483 1dr9_A B7-1 (CD80), T lymphocy 98.7 9.7E-08 3.3E-12 59.6 7.6 64 11-82 119-196 (201)
484 1ymm_D T cell receptor alpha c 98.7 2.2E-09 7.6E-14 68.0 0.0 101 6-121 9-146 (207)
485 1fo0_A Protein (BM3.3 T cell r 98.7 2.3E-08 7.7E-13 57.5 4.3 60 5-72 7-95 (116)
486 2qhl_A Novel immune-type recep 98.7 6.1E-08 2.1E-12 55.2 6.1 61 5-73 6-98 (111)
487 3ux9_B SCFV antibody; five hel 98.7 4.6E-08 1.6E-12 63.5 6.2 59 8-74 144-236 (256)
488 2z35_A T-cell receptor alpha-c 98.7 2.9E-08 9.8E-13 56.7 4.5 59 5-71 7-92 (112)
489 2dm3_A KIAA0992 protein, palla 98.7 4.4E-08 1.5E-12 55.5 5.1 49 87-136 8-56 (110)
490 1nko_A Sialic acid binding IG- 98.7 2.3E-07 8E-12 54.3 8.4 67 7-74 15-111 (132)
491 2dm2_A Palladin; beta-sandwich 98.7 8.1E-08 2.8E-12 54.4 6.1 45 87-132 7-51 (110)
492 1tvd_A T cell receptor, ES204 98.7 3.5E-08 1.2E-12 56.6 4.6 61 5-73 7-98 (116)
493 3bfo_A Mucosa-associated lymph 98.6 1.7E-07 5.6E-12 51.3 7.1 46 88-134 3-48 (91)
494 2bk8_A Connectin, M1, titin he 98.6 2.9E-07 1E-11 50.8 8.2 51 96-146 8-65 (97)
495 3irg_A Titin; IG-like, titin, 98.6 1.4E-07 4.8E-12 52.2 6.9 43 88-131 5-47 (100)
496 4f9p_D 103.2 anti-BTN3A1 antib 98.6 1.2E-07 4E-12 60.9 7.1 112 7-125 9-173 (254)
497 1lk3_L 9D7 light chain; antige 98.6 6.1E-08 2.1E-12 61.0 5.9 58 12-76 125-201 (210)
498 2dlt_A Myosin binding protein 98.6 6.6E-08 2.2E-12 54.5 5.4 58 87-146 7-70 (106)
499 3t0v_A Immunoglobulin variable 98.6 1.2E-07 4.2E-12 55.1 6.7 61 7-74 9-95 (123)
500 1hkf_A NKP44, NK cell activati 98.6 1.8E-07 6.3E-12 54.2 7.3 65 4-74 16-107 (122)
No 1
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.89 E-value=3.1e-21 Score=120.86 Aligned_cols=132 Identities=15% Similarity=0.303 Sum_probs=106.5
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE-------------EecCCceEEEecCCCCCCEEEEEEEEe
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL-------------YVTRNGSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~-------------~~~~~~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
....+..|+.+.|.|.+.+.+.| .+.|++++. .......|.|.+++.+|+|.|+|.+.+
T Consensus 13 ~~~~v~~G~~v~l~C~~~~~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (194)
T 2a38_A 13 QSVVVLEGSTATFEAHISGFPVP--------EVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATN 84 (194)
T ss_dssp CCEEEETTSCEEEEEEEEEESCC--------EEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CceEEECCCEEEEEEEEEecCCC--------EEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEc
Confidence 34678899999999999888877 699999871 112235799999999999999999999
Q ss_pred CCCCcEEEEEEEEe---cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceEEE------EEEE
Q psy6361 73 AAGSTSKTIQMNVL---VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYITF------FLFF 143 (148)
Q Consensus 73 ~~~~~~~~~~l~v~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~~~------~l~~ 143 (148)
..+.......+.|. .+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+++|..+....++... .|.|
T Consensus 85 ~~~~~~~~~~l~v~~~~~~p~~~~~-~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i 163 (194)
T 2a38_A 85 GSGQATSTAELLVKAETAPPNFVQR-LQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLI 163 (194)
T ss_dssp TTEEEEEEEEEEEECCCEEEEEEEC-CCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEEEEE
T ss_pred CCceEeEEEEEEEccCCCCCEEEeC-CccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEEE
Confidence 88876667777777 46666666 67778899999999999999999999999999999876655432 4666
Q ss_pred Eee
Q psy6361 144 QRL 146 (148)
Q Consensus 144 ~~~ 146 (148)
..+
T Consensus 164 ~~~ 166 (194)
T 2a38_A 164 AEA 166 (194)
T ss_dssp EEE
T ss_pred CCC
Confidence 554
No 2
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.88 E-value=1.9e-21 Score=133.78 Aligned_cols=129 Identities=17% Similarity=0.260 Sum_probs=108.8
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC--------EEecCCceEEEecCCCCCCEEEEEEEEeCCCCcEE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL--------LYVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSK 79 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~--------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 79 (148)
..+..|+.+.|.|.+.+.|.| .+.|++++ ........|.|.++..+|+|.|+|.|.|..+....
T Consensus 215 ~~~~~G~~v~l~C~~~g~P~p--------~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~ 286 (384)
T 3kld_A 215 VPAEKGTTVKLECFALGNPVP--------TILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVA 286 (384)
T ss_dssp EEEETTSCEEEEEEEEEESCC--------EEEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred eEecCCCcEEEEEEEeecCCC--------cEEEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEE
Confidence 446779999999999999988 69999953 23344568999999999999999999999998878
Q ss_pred EEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceEEE--EEEEEe
Q psy6361 80 TIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYITF--FLFFQR 145 (148)
Q Consensus 80 ~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~~~--~l~~~~ 145 (148)
...|.|..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+|||..+....++... .|.|..
T Consensus 287 ~~~l~v~~~P~~~~~-~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~ 353 (384)
T 3kld_A 287 KGQLTFYAQPNWVQI-INDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITI 353 (384)
T ss_dssp EEEEEEEEEEEEEEC-CCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEETTEEEESS
T ss_pred EEEEEEecCCccccC-CCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEeCCEEEEee
Confidence 888999988998887 77888999999999999999999999999999999776655432 455544
No 3
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.88 E-value=1.6e-22 Score=128.39 Aligned_cols=115 Identities=13% Similarity=0.166 Sum_probs=92.7
Q ss_pred eeeEeeeccceeeee---ecccCCCCcCCCCccEEEEeeCC----------------------------EEecCCceEEE
Q psy6361 7 VEQAMLLDLIPMHSR---YNYTNLPQSRNPGQVIKRYLKDL----------------------------LYVTRNGSFVI 55 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~---~~~~~~p~~~~~~~~~v~W~~~~----------------------------~~~~~~~~l~i 55 (148)
...|.+|+.+.|.|. +.+.|.| .++|+|++ ........|.|
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~--------~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I 73 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEI--------EVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVV 73 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTS--------EEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEE
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCc--------EEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEE
Confidence 357899999999995 4555666 69999975 01122357999
Q ss_pred ecCCCCCCEEEEEEEEeCCCCcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEe
Q psy6361 56 NNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLL 130 (148)
Q Consensus 56 ~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l 130 (148)
.++..+|+|.|+|.+.|..+.....+.|.|..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++++..+
T Consensus 74 ~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~-~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~ 147 (203)
T 4fa8_A 74 TAANISHDGNYLCRMKLGETEVTKQEHLSVVKPLTLSVH-SERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVE 147 (203)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEEE-EEECCSSCSCCEEEEEEEEEESCCEEEECCC----
T ss_pred ccCCHHHCeEEEEEEEcCCCcEEEEEEEEecCCceeeec-ceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeee
Confidence 999999999999999999988888888999888888766 66777889999999999999999999999866443
No 4
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.87 E-value=7e-21 Score=119.15 Aligned_cols=111 Identities=17% Similarity=0.309 Sum_probs=95.6
Q ss_pred eccceeeeeecccCCCCcCCCCccEEEEeeCCEEec------CCceEEEecCCCCCCEEEEEEEEeCCCCcEEEEEEEEe
Q psy6361 13 LDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT------RNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVL 86 (148)
Q Consensus 13 g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 86 (148)
|+.+.|.|.+.+.+.|. ..+.|++++.... ....|.|.+++.+|+|.|+|.+.+. +.....+.|.|.
T Consensus 18 G~~v~l~C~~~~~~~~~------~~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~~~l~V~ 90 (190)
T 2wv3_A 18 LLPVTLQCNLTSSSHTL------MYSYWTKNGVELTATRKNASNMEYRINKPRAEDSGEYHCVYHFV-SAPKANATIEVK 90 (190)
T ss_dssp SSCEEEEEEEEECSSCE------EEEEEEETTEECTTCCBCCSEEEEEESSCCGGGCEEEEEEEEET-TEEEEEEEEEEE
T ss_pred CceEEEEEEeccCCCCc------eEEEEEECCEECcccceEeccEEEEEecCCcccCEEEEEEEEeC-CcccccEEEEEe
Confidence 99999999999887621 1699999983332 3457999999999999999999998 777788889999
Q ss_pred cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEE--CCEEee
Q psy6361 87 VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYK--DGSLLR 131 (148)
Q Consensus 87 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~--~g~~l~ 131 (148)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ +|..+.
T Consensus 91 ~~p~~~~~-~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~ 136 (190)
T 2wv3_A 91 AAPDITGH-KRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEE 136 (190)
T ss_dssp CCCEEEEE-CSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEE
T ss_pred cCCccccc-CCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceee
Confidence 99999877 777889999999999999999999999999 888775
No 5
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.87 E-value=4.9e-21 Score=118.99 Aligned_cols=121 Identities=20% Similarity=0.353 Sum_probs=101.7
Q ss_pred cceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEecC-------------CceEEEecCCCCCCEEEEEEE
Q psy6361 4 TMNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTR-------------NGSFVINNIAEKDTNVYTCTV 70 (148)
Q Consensus 4 ~~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~~-------------~~~l~i~~~~~~d~g~y~C~~ 70 (148)
......+..|+.+.|.|.+.+.+.| .+.|++++..... ...|.|.+++.+|+|.|+|.+
T Consensus 8 ~p~~~~v~~G~~v~l~C~~~~~p~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 79 (182)
T 1rhf_A 8 APVKLTVSQGQPVKLNCSVEGMEEP--------DIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQV 79 (182)
T ss_dssp CCEEEEEETTCCEEEEEEEESCSSC--------CEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEE
T ss_pred CCcceEEeCCCcEEEEEEEeCCCCC--------eEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEE
Confidence 3456788999999999999987777 5999999722211 257999999999999999999
Q ss_pred EeCCCC-cEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCC-eEEEEECCEEeecC
Q psy6361 71 SNAAGS-TSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTP-DFSWYKDGSLLRIQ 133 (148)
Q Consensus 71 ~~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~~~W~~~g~~l~~~ 133 (148)
.+..+. .+..+.|.|..+|.+... +....+.+|+.+.|.|.+.|.|.| .+.|+++|..+...
T Consensus 80 ~~~~~~~~~~~~~l~V~~~p~~~~~-~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~ 143 (182)
T 1rhf_A 80 EDGGETEISQPVWLTVEGVPFFTVE-PKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGP 143 (182)
T ss_dssp SSCTTCEECCCEEEEEECSCEEEEC-CCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCS
T ss_pred EcCCCcEEEEEEEEEEecCCeEEec-CcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCC
Confidence 988665 456778899999998887 777889999999999999999999 99999999988643
No 6
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.87 E-value=1e-20 Score=118.27 Aligned_cols=123 Identities=20% Similarity=0.364 Sum_probs=103.6
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE----------ecCCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY----------VTRNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~----------~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
.....+..|+.+.|.|.+.+.+.| .+.|++++.. ......|.|.+++.+|+|.|+|.+.+..
T Consensus 14 ~~~~~~~~G~~v~l~C~~~~~p~~--------~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 85 (192)
T 2iep_A 14 LETVDALVEEVATFMCAVESYPQP--------EISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNGV 85 (192)
T ss_dssp CCEEEEETTSCEEEECCEEEESCC--------EEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSS
T ss_pred ccceeeeCCCcEEEEeeCCCCCCC--------eEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcCC
Confidence 345678999999999999987777 6999998722 2234569999999999999999999987
Q ss_pred CC-cEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCce
Q psy6361 75 GS-TSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHY 136 (148)
Q Consensus 75 ~~-~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~ 136 (148)
+. ......+.|..+|.+... +....+.+|+.+.|.|.+.|.|.+.+.|+++|..+....++
T Consensus 86 ~~~~~~~~~l~v~~~p~~~~~-~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~ 147 (192)
T 2iep_A 86 GGAVESCGALQVKMKPKITRP-PINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRI 147 (192)
T ss_dssp SCCEEEEEEEEEEEEEEEEEC-CCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSE
T ss_pred CceeEeEEEEEEEeCCccccC-CcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcE
Confidence 76 556678888888888877 77888999999999999999999999999999998765544
No 7
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.87 E-value=4e-20 Score=117.63 Aligned_cols=119 Identities=18% Similarity=0.288 Sum_probs=97.2
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec------------CCceEEEecC-CCCCCEEEEEEEEe
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT------------RNGSFVINNI-AEKDTNVYTCTVSN 72 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~------------~~~~l~i~~~-~~~d~g~y~C~~~~ 72 (148)
....+..|+.+.|.|.+.+.+.| .+.|++++.... ....|.|.++ ..+|+|.|+|.+.|
T Consensus 14 ~~~~v~~G~~v~L~C~~~g~p~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n 85 (212)
T 2yd6_A 14 VDQTGVSGGVASFICQATGDPRP--------KIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASN 85 (212)
T ss_dssp CCEEEETTSCEEEEEEEEEESCC--------EEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEE
T ss_pred ceeEEecCCeEEEEEEEeeCCCC--------EEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEc
Confidence 34678899999999999988877 699999972221 2346999999 59999999999999
Q ss_pred CCCCcEEEEEEEEecC-------CEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecC
Q psy6361 73 AAGSTSKTIQMNVLVP-------PFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQ 133 (148)
Q Consensus 73 ~~~~~~~~~~l~v~~~-------p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~ 133 (148)
..+.....+.|.|... |.+... +....+.+|+.+.|.|.+.|.|.|.+.|+++|..+...
T Consensus 86 ~~g~~~~~~~l~V~~~~~~~~~~p~~~~~-~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~ 152 (212)
T 2yd6_A 86 NVGEISVSTRLTVLREDQIPRGFPTIDMG-PQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTS 152 (212)
T ss_dssp TTEEEEEEEEEEEECGGGCCTTCCEEEEC-CCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC---
T ss_pred CCCcEEEEEEEEEeccCccCCCcceeecC-CcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCc
Confidence 9887777778888643 667666 66778889999999999999999999999999998754
No 8
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.87 E-value=1.2e-20 Score=118.56 Aligned_cols=125 Identities=19% Similarity=0.316 Sum_probs=101.0
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec-----------CC--ceEEEecCCCCCCEEEEEEEEe
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT-----------RN--GSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~-----------~~--~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
....+..|+.+.|.|.+.+.+.| .+.|++++.... .. ..|.|.++..+|+|.|+|.+.+
T Consensus 12 ~~~~v~~G~~v~l~C~~~~~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 83 (197)
T 2j8h_A 12 RNLNVRYQSNATLVCKVTGHPKP--------IVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATN 83 (197)
T ss_dssp CCEEEETTSCEEEEEEEECSSCC--------EEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEE
T ss_pred CccEEcCCCEEEEEEEEeecCCC--------EEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEE
Confidence 45678999999999999987777 699999872221 11 2899999999999999999999
Q ss_pred CCCCcEEEEEEEEecCCEEEeCC----CceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceEE
Q psy6361 73 AAGSTSKTIQMNVLVPPFFKDEQ----QESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYIT 138 (148)
Q Consensus 73 ~~~~~~~~~~l~v~~~p~~~~~~----~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~~ 138 (148)
..+.....+.|.|..+|.+.... +....+.+|+.+.|.|.+.|.|.|.+.|++++..+....++..
T Consensus 84 ~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~ 153 (197)
T 2j8h_A 84 QGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQV 153 (197)
T ss_dssp TTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEE
T ss_pred CCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEE
Confidence 88877778888888766654331 2456788899999999999999999999999999986665543
No 9
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.87 E-value=1.1e-20 Score=118.55 Aligned_cols=121 Identities=21% Similarity=0.310 Sum_probs=100.7
Q ss_pred ceeeeEeeeccceeeeeec-ccCCCCcCCCCccEEEEeeCCEEecC--------------------CceEEEecCCCCCC
Q psy6361 5 MNVEQAMLLDLIPMHSRYN-YTNLPQSRNPGQVIKRYLKDLLYVTR--------------------NGSFVINNIAEKDT 63 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~-~~~~p~~~~~~~~~v~W~~~~~~~~~--------------------~~~l~i~~~~~~d~ 63 (148)
.....+..|+.+.|.|.+. +.+.| .+.|++++..... ...|.|.++..+|+
T Consensus 9 p~~~~v~~G~~v~l~C~~~~~~p~~--------~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 80 (195)
T 2c5d_C 9 PGNITGARGLTGTLRCQLQVQGEPP--------EVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDT 80 (195)
T ss_dssp CCCEEECTTCCEEEEEEEEEESSCC--------CCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTC
T ss_pred hhheEEecCCcEEEecccccCCCCc--------EEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCC
Confidence 3457788999999999999 77776 5999999722211 25799999999999
Q ss_pred EEEEEEEEeCCCCc-EEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCC-eEEEEECCEEeecCC
Q psy6361 64 NVYTCTVSNAAGST-SKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTP-DFSWYKDGSLLRIQS 134 (148)
Q Consensus 64 g~y~C~~~~~~~~~-~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~~~W~~~g~~l~~~~ 134 (148)
|.|+|.+.+..+.. +..+.|.|..+|.+... +....+.+|+.+.|.|.+.|.|.| .+.|+++|..+....
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~-~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~ 152 (195)
T 2c5d_C 81 GQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEE-PEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAP 152 (195)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECCSCEEEEC-CCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSST
T ss_pred cEEEEEEEeCCCceecccEEEEEecCCeEEcC-CCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCC
Confidence 99999999977653 34478888889988877 777889999999999999999999 999999999887543
No 10
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.86 E-value=2.9e-20 Score=116.53 Aligned_cols=124 Identities=16% Similarity=0.282 Sum_probs=100.4
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEecC-----------CceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTR-----------NGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~~-----------~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
....+..|+.+.|.|.+.+.+.| .+.|++++..... ...|.|.++..+|+|.|+|.+.+..
T Consensus 15 ~~~~v~~G~~v~l~C~~~~~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 86 (197)
T 3lcy_A 15 KDVTTKLGEAAQLSCQIVGRPLP--------DIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEV 86 (197)
T ss_dssp CCEEEETTSEEEEEEEEEEESCC--------EEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSS
T ss_pred CceEEeCCCcEEEEEEEecCCCC--------EEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCC
Confidence 45678899999999999887777 6999998722211 1279999999999999999999988
Q ss_pred CCcEEEEEEEEecCCEEEeCC--CceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceE
Q psy6361 75 GSTSKTIQMNVLVPPFFKDEQ--QESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYI 137 (148)
Q Consensus 75 ~~~~~~~~l~v~~~p~~~~~~--~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~ 137 (148)
+.......+.|..+|.+.... +....+.+|+.+.|.|.+.+.|.|.+.|++++..+....++.
T Consensus 87 ~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~ 151 (197)
T 3lcy_A 87 GEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENIT 151 (197)
T ss_dssp CEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEE
T ss_pred CceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceE
Confidence 877777788887767665321 345677899999999999999999999999999998766544
No 11
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.86 E-value=2.9e-20 Score=122.76 Aligned_cols=121 Identities=24% Similarity=0.351 Sum_probs=104.2
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE-----------ecCCceEEEecCCCCCCEEEEEEEEeCCCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY-----------VTRNGSFVINNIAEKDTNVYTCTVSNAAGS 76 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~-----------~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 76 (148)
..+..|+.+.|.|.+.+.+.| .+.|++++.. ......|.|.++..+|+|.|+|.+.|..+.
T Consensus 109 ~~v~~g~~~~l~C~~~g~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 180 (284)
T 2rik_A 109 RIVKQDEHTRYECKIGGSPEI--------KVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGS 180 (284)
T ss_dssp EEEETTCCEEEEEEEESSSCC--------EEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCE
T ss_pred eEecCCceEEEEEEEeeeCCC--------EEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCc
Confidence 457789999999999988777 6999999722 123457999999999999999999999888
Q ss_pred cEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceE
Q psy6361 77 TSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYI 137 (148)
Q Consensus 77 ~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~ 137 (148)
....+.|.|..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+++|..+....++.
T Consensus 181 ~~~~~~l~V~~~p~~~~~-~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~ 240 (284)
T 2rik_A 181 ASSSTSLKVKEPPVFRKK-PHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYK 240 (284)
T ss_dssp EEEEEEEEEECCCBCCSC-CCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEE
T ss_pred eeEEEEEEEecCCcceeC-CCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEE
Confidence 888889999999988877 777888999999999999999999999999999998766654
No 12
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.86 E-value=6.4e-20 Score=116.63 Aligned_cols=118 Identities=18% Similarity=0.312 Sum_probs=99.8
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec-------------CCceEEEecCCC-CCCEEEEEEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT-------------RNGSFVINNIAE-KDTNVYTCTVS 71 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~-------------~~~~l~i~~~~~-~d~g~y~C~~~ 71 (148)
....+..|+.+.|.|.+.+.+.| .+.|++++.... ....|.|.++.. +|+|.|+|.+.
T Consensus 14 ~~~~v~~G~~v~l~C~~~g~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~ 85 (212)
T 2yd1_A 14 QNQGVRVGGVASFYCAARGDPPP--------SIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAE 85 (212)
T ss_dssp CCEEEETTSCEEEEEEEECSSCC--------EEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEE
T ss_pred CceEEecCCEEEEEEEEccCCCC--------eEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEE
Confidence 45678899999999999988877 699999873221 114799999999 99999999999
Q ss_pred eCCCC-cEEEEEEEEecC-------CEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeec
Q psy6361 72 NAAGS-TSKTIQMNVLVP-------PFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 72 ~~~~~-~~~~~~l~v~~~-------p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~ 132 (148)
|..+. .+..+.|.|... |.+... +....+.+|+.+.|.|.+.|.|.+.+.|++++..+..
T Consensus 86 n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~-~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~ 153 (212)
T 2yd1_A 86 NGVGDAVSADATLTIYEGDKTPAGFPVITQG-PGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDM 153 (212)
T ss_dssp CSSSCEEEEEEEEEEECTTCSCTTCCEEEEC-CCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCT
T ss_pred eCCCCeEEeeEEEEEecccCCCCCCCeeEeC-CCceEeecCCeEEEEEEeccCCCCeEEEEECCeEccc
Confidence 98887 677888888754 677766 7778888999999999999999999999999999875
No 13
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.86 E-value=8.3e-20 Score=120.56 Aligned_cols=123 Identities=23% Similarity=0.304 Sum_probs=103.5
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE-----------ecCCceEEEecCCCCCCEEEEEEEEeCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY-----------VTRNGSFVINNIAEKDTNVYTCTVSNAAG 75 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~-----------~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 75 (148)
...+..|+.+.|.|.+.+.+.| .+.|+|++.. ......|.|.++..+|+|.|+|.+.|..+
T Consensus 14 ~~~~~~G~~v~l~C~~~g~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g 85 (284)
T 2rik_A 14 SVDLALGESGTFKCHVTGTAPI--------KITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAG 85 (284)
T ss_dssp CEEEETTCCEEEEEEEESSSCC--------EEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred ceEecCCCcEEEEEEEEcCCCC--------EEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECCc
Confidence 4568899999999999988776 6999999722 12346899999999999999999999888
Q ss_pred CcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceE
Q psy6361 76 STSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYI 137 (148)
Q Consensus 76 ~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~ 137 (148)
..+..+.|.|..+|.+.........+.+|+.+.|.|.+.|.|.+.+.|+++|..+....++.
T Consensus 86 ~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~ 147 (284)
T 2rik_A 86 KDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFR 147 (284)
T ss_dssp EEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEE
T ss_pred eEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEE
Confidence 87888899999989877652445678899999999999999999999999999988766543
No 14
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.86 E-value=2e-20 Score=134.52 Aligned_cols=120 Identities=23% Similarity=0.352 Sum_probs=104.8
Q ss_pred eEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe-----------cCCceEEEecCCCCCCEEEEEEEEeCCCCc
Q psy6361 9 QAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV-----------TRNGSFVINNIAEKDTNVYTCTVSNAAGST 77 (148)
Q Consensus 9 ~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~-----------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 77 (148)
.+..|+.+.|.|.+.+.|.| .+.|+|++... .....|.|.++..+|+|.|+|.|.|..+..
T Consensus 302 ~v~~g~~~~l~C~~~g~P~p--------~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 373 (570)
T 3b43_A 302 IVKQDEHTRYECKIGGSPEI--------KVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSA 373 (570)
T ss_dssp CEESSCEEEEEEEEESSSSC--------EEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCC
T ss_pred EEcCCCcEEEEEEEeeCCCC--------EEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEE
Confidence 46789999999999998888 69999997221 223569999999999999999999999998
Q ss_pred EEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceE
Q psy6361 78 SKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYI 137 (148)
Q Consensus 78 ~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~ 137 (148)
.....|.|..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+|||..+..+.++.
T Consensus 374 ~~~~~l~V~~~P~~~~~-~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~ 432 (570)
T 3b43_A 374 SSSTSLKVKEPPVFRKK-PHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYK 432 (570)
T ss_dssp EEEEEECEECCCEECSC-CCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEE
T ss_pred EEEEEEEecCCCeeecC-CCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEE
Confidence 88889999999999877 778888999999999999999999999999999998766654
No 15
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.85 E-value=5.2e-20 Score=126.79 Aligned_cols=119 Identities=22% Similarity=0.361 Sum_probs=104.6
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC--------EEecCCceEEEecCCCCCCEEEEEEEEeCCCCcE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL--------LYVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTS 78 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~--------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 78 (148)
...+..|+.+.|.|.+.+.+.| .+.|++++ ........|.|.++..+|+|.|+|.+.|..+...
T Consensus 231 ~~~~~~G~~v~l~C~~~g~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 302 (404)
T 3p3y_A 231 SQMVLRGMDLLLECIASGVPTP--------DIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIR 302 (404)
T ss_dssp EEEEETTSCEEEECCBCCSSCC--------EEEEEETTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred CceEecCCCEEEEEEECCCCCC--------cEEEEECCEECCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEE
Confidence 4568889999999999988877 69999987 2333467899999999999999999999998888
Q ss_pred EEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCC
Q psy6361 79 KTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQS 134 (148)
Q Consensus 79 ~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~ 134 (148)
..+.|.|..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++||..+....
T Consensus 303 ~~~~l~V~~~p~~~~~-~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~ 357 (404)
T 3p3y_A 303 HTISVRVKAAPYWLDE-PKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAP 357 (404)
T ss_dssp EEEEEEEEEEEEEEEC-CCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSC
T ss_pred EEEEEEEeCCCeeecc-CCcceeecCCcEEEEEEccccCCCceEEEECCEecCCCC
Confidence 8889999989988887 788889999999999999999999999999999987543
No 16
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.85 E-value=7.1e-20 Score=114.44 Aligned_cols=118 Identities=13% Similarity=0.212 Sum_probs=99.6
Q ss_pred eeeeEeeeccceeeeeecccC-CCCcCCCCccEEEEee-CCEEe-------------cCCceEEEecCCCCCCEEEEEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTN-LPQSRNPGQVIKRYLK-DLLYV-------------TRNGSFVINNIAEKDTNVYTCTV 70 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~-~p~~~~~~~~~v~W~~-~~~~~-------------~~~~~l~i~~~~~~d~g~y~C~~ 70 (148)
....+..|+.+.|.|.+.+.+ .+ .+.|++ ++... .....|.|.++..+|+|.|+|.+
T Consensus 10 ~~~~v~~G~~v~l~C~~~~~~~~~--------~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 10 SQGEISVGESKFFLCQVAGDAKDK--------DISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp SSEEEETTCCEEEEEEECCCSCCC--------EEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCcEEcCCCCEEEEEECCCCCCCc--------eEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 456788999999999999876 44 799999 65111 23468999999999999999999
Q ss_pred EeCCC-CcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeec
Q psy6361 71 SNAAG-STSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 71 ~~~~~-~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~ 132 (148)
.+..+ .....+.|.+..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+++|..+..
T Consensus 82 ~~~~~~~~~~~~~l~v~~~p~~~~~-~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~ 143 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQKLMFKNA-PTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVIL 143 (191)
T ss_dssp EETTTEEEEEEEEEEEECCSEEEEC-CSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGG
T ss_pred EcCCCcceEEEEEEEeecCceEecC-CCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeec
Confidence 99874 4667778888888998877 7778889999999999999999999999999998864
No 17
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.85 E-value=1e-19 Score=124.96 Aligned_cols=119 Identities=18% Similarity=0.318 Sum_probs=101.8
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeC--CEEec----------------CCceEEEecCCCCCCEEEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKD--LLYVT----------------RNGSFVINNIAEKDTNVYTC 68 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~--~~~~~----------------~~~~l~i~~~~~~d~g~y~C 68 (148)
...+..|+.+.|.|.+.+.|.| .+.|+|+ +.... ....|.|.++..+|+|.|.|
T Consensus 9 ~~~~~~G~~v~l~C~~~g~p~p--------~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 80 (389)
T 2jll_A 9 NETTYENGQVTLVCDAEGEPIP--------EITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDC 80 (389)
T ss_dssp CEEEETTSEEEEEEEEECSSCC--------EEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEE
T ss_pred ceEEeCCCeEEEEEEeecccCC--------eEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEE
Confidence 4567779999999999998887 6999998 52211 23589999999999999999
Q ss_pred EEEeCCCCcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCC
Q psy6361 69 TVSNAAGSTSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQS 134 (148)
Q Consensus 69 ~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~ 134 (148)
.+.|..+..+..+.|.|..+|.+... +....+.+|+.+.|.|.+.|.|.+.+.|+++|..+....
T Consensus 81 ~a~n~~g~~~~~~~l~V~~~P~~~~~-~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~ 145 (389)
T 2jll_A 81 EAASRIGGHQKSMYLDIEYAPKFISN-QTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKN 145 (389)
T ss_dssp EEECSSCEEEEEEEEEEEEEEEECCS-CCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTT
T ss_pred EEEeCCCCcceEEEEEEEeCCEEecC-cceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCccc
Confidence 99999988888889999998988766 555678899999999999999999999999999987643
No 18
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.85 E-value=7.1e-20 Score=125.49 Aligned_cols=130 Identities=18% Similarity=0.270 Sum_probs=109.3
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE-----EecCCceEEEecCCCCCCEEEEEEEEeCCCCcEEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL-----YVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTI 81 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~-----~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 81 (148)
...+..|+.+.|.|.+.+.+.| .+.|++++. .......|.|.++..+|+|.|+|.+.|..+......
T Consensus 216 ~~~~~~G~~v~l~C~~~g~p~~--------~i~W~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 287 (382)
T 1cs6_A 216 DTYALTGQMVTLECFAFGNPVP--------QIKWRKLDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQG 287 (382)
T ss_dssp EEEEETTCCEEEECEEEEESCC--------EEEEEECCSCCSCCCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred ceEEeCCCeEEEEEEEccCCCC--------EEEEEECCcccccEEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEE
Confidence 4567789999999999998877 699999862 223567899999999999999999999998878888
Q ss_pred EEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceEEE--EEEEEe
Q psy6361 82 QMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYITF--FLFFQR 145 (148)
Q Consensus 82 ~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~~~--~l~~~~ 145 (148)
.|.|..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+++|..+....++... .|.|..
T Consensus 288 ~l~V~~~p~~~~~-~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~L~i~~ 352 (382)
T 1cs6_A 288 RIIIHAQPDWLDV-ITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGELRFSK 352 (382)
T ss_dssp EEEEEEEEEEEEC-CCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEETTEEEESS
T ss_pred EEEEecCCCcccC-CCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEECCEEEECc
Confidence 8999888998877 77888999999999999999999999999999999876554432 355443
No 19
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.84 E-value=1.5e-19 Score=112.61 Aligned_cols=123 Identities=24% Similarity=0.377 Sum_probs=95.9
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE----------EecCCceEEEecCCCCCCEEEEEEEEeCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL----------YVTRNGSFVINNIAEKDTNVYTCTVSNAAG 75 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~----------~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 75 (148)
....+..|+.+.|.|.+.+.+.| .+.|++++. ....+..|.|.+++.+|+|.|+|.+.+..+
T Consensus 10 ~~~~v~~G~~v~l~C~~~~~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~ 81 (189)
T 2v5t_A 10 SPQEFKQGEDAEVVCRVSSSPAP--------AVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEAR 81 (189)
T ss_dssp SSEEEETTSCEEECCEEECSSCC--------EEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTT
T ss_pred CCEEEeCCCcEEEEEEEcCCCCC--------EEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCC
Confidence 45678899999999999887776 699999862 223456799999999999999999998875
Q ss_pred C--cEEEEEEEEecCCEEEeCCCc--eEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceE
Q psy6361 76 S--TSKTIQMNVLVPPFFKDEQQE--SVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYI 137 (148)
Q Consensus 76 ~--~~~~~~l~v~~~p~~~~~~~~--~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~ 137 (148)
. ......+.+..+|.+... +. ...+.+|+.+.|.|.+.|.|.+.+.|+++|..+....++.
T Consensus 82 ~~~~~~~~~l~v~~~p~~~~~-~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~ 146 (189)
T 2v5t_A 82 GEIDFRDIIVIVNVPPAISMP-QKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYI 146 (189)
T ss_dssp TEEEEEEEEEEEEEEEEEECS-CCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEE
T ss_pred CceEEEEEEEEecCCCCcccc-cccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEE
Confidence 4 234556667777777655 33 3456679999999999999999999999999987665543
No 20
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.84 E-value=8.2e-20 Score=116.75 Aligned_cols=121 Identities=17% Similarity=0.284 Sum_probs=99.8
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe--cCCceEEEecCCCCCCEEEEEEEEeCCCC-cEEEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV--TRNGSFVINNIAEKDTNVYTCTVSNAAGS-TSKTIQ 82 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~~~~~~-~~~~~~ 82 (148)
....+..|+.+.|.|.+.+.+.+ .+.|++++... .....|.|.++..+|+|.|+|.+.+..+. .+..+.
T Consensus 26 ~~~~v~~G~~v~L~C~~~~~p~~--------~v~W~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~ 97 (218)
T 3k0w_A 26 ESKAVLAGQFVKLCCRATGHPFV--------QYQWFKMNKEIPNGNTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQ 97 (218)
T ss_dssp CCEEEETTSBEEEECEETTTTSS--------EEEEEETTEECTTCCSSEEEETTCCGGGCEEEEEEEECTTCCEECCCEE
T ss_pred CCeEEeCCCcEEEEeeecCCCCC--------EEEEEECCEECCCCCCCEEEEccCChhhCeEeEEEEEcCCCCceeeEEE
Confidence 35678899999999999887776 69999998443 34568999999999999999999998765 345567
Q ss_pred EEEecC---------------CEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCc
Q psy6361 83 MNVLVP---------------PFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSH 135 (148)
Q Consensus 83 l~v~~~---------------p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~ 135 (148)
|.|... |.+... +....+.+|+.+.|.|.+.+.|.+.+.|+++|..+.....
T Consensus 98 l~V~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~~ 164 (218)
T 3k0w_A 98 LDVCDIPESFQRSVDGVSESKLQICVE-PTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETK 164 (218)
T ss_dssp EEEECCCGGGCTTCCSBCCSSCEEEEC-CCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCCS
T ss_pred EEEEccCcccccccccccCCCceEEEC-CCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCCC
Confidence 777644 566666 7778899999999999999999999999999999875443
No 21
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.84 E-value=9.5e-20 Score=125.51 Aligned_cols=121 Identities=20% Similarity=0.381 Sum_probs=104.6
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE---------EecCCceEEEecCCCCCCEEEEEEEEeCCCCcE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL---------YVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTS 78 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~---------~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 78 (148)
..+..|+.+.|.|.+.+.+.| .+.|++++. .......|.|.++..+|+|.|+|.+.|..+..+
T Consensus 231 ~~~~~g~~~~l~C~~~~~p~~--------~~~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 302 (403)
T 3laf_A 231 VIAIEGKDAVLECCVSGYPPP--------SFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENIS 302 (403)
T ss_dssp EEEETTSCEEECCEEEEESCC--------EEEEEETTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred eEecCCCcEEEEEEcCCCCCC--------eEEEEECCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceE
Confidence 456789999999999998887 699999872 223356799999999999999999999988888
Q ss_pred EEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceE
Q psy6361 79 KTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYI 137 (148)
Q Consensus 79 ~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~ 137 (148)
....|.|..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+++|..+.....+.
T Consensus 303 ~~~~l~V~~~p~~~~~-~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~ 360 (403)
T 3laf_A 303 ASAELTVLVPPWFLNH-PSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQ 360 (403)
T ss_dssp EEEEEEEEEEEEEEEC-CCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEE
T ss_pred EEEEEEEECCCcEeec-CcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEE
Confidence 8889999999988887 777888999999999999999999999999999987655544
No 22
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.84 E-value=6.1e-19 Score=110.13 Aligned_cols=116 Identities=20% Similarity=0.346 Sum_probs=96.1
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE---------ecCCceEEEecCCCCCCEEEEEEEEeCCCCc
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY---------VTRNGSFVINNIAEKDTNVYTCTVSNAAGST 77 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~---------~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 77 (148)
...+..|+.+.|.|.+.+.+.+ .+.|++++.. ......|.|.+++.+|+|.|+|.+.+..+..
T Consensus 13 ~~~v~~G~~v~l~C~~~~~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~ 84 (192)
T 2va4_A 13 NATAERGEEMTFSCRASGSPEP--------AISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGED 84 (192)
T ss_dssp EEETTSCCCEEEECEEECSSCC--------EEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred EEEEecCCCEEEEEeeccCCCC--------eEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEcccccc
Confidence 4677889999999999888776 6999999722 2345679999999999999999999988877
Q ss_pred EEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEEC--CEEeec
Q psy6361 78 SKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKD--GSLLRI 132 (148)
Q Consensus 78 ~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~--g~~l~~ 132 (148)
...+.|.|..+|.+... + ...+.+|+.+.|.|.+.+.|.+.+.|+++ +..+..
T Consensus 85 ~~~~~l~V~~~p~~~~~-~-~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~ 139 (192)
T 2va4_A 85 EKQAFLQVFVQPHIIQL-K-NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTE 139 (192)
T ss_dssp EEEEEEEEEEEEEEEEE-C-CEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECT
T ss_pred ceEEEEEEEccCccccc-C-cceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeec
Confidence 77778888888877654 3 45677899999999999999999999998 666653
No 23
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.84 E-value=5.3e-19 Score=112.08 Aligned_cols=119 Identities=18% Similarity=0.234 Sum_probs=87.4
Q ss_pred eeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe-----------cCCceEEEecCCCCCCEEEEEEEEeCCCCcEEE
Q psy6361 12 LLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV-----------TRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKT 80 (148)
Q Consensus 12 ~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~-----------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 80 (148)
.++.+.|.|.+.+.+++. .+.|+|++... .....|.|.++..+|+|.|+|.+.+..+.....
T Consensus 16 ~~~~~~l~C~~~~~~p~~-------~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~ 88 (212)
T 2r15_A 16 TAEGIQLYSFVTYYVEDL-------KVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKT 88 (212)
T ss_dssp CSSEEEEEEEBSSCCSSC-------EEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEE
T ss_pred cCceEEEEEEEeccCCCc-------eEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEE
Confidence 455556666666643222 79999997221 112359999999999999999999977765555
Q ss_pred EEEEEec--------------------CCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceE
Q psy6361 81 IQMNVLV--------------------PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYI 137 (148)
Q Consensus 81 ~~l~v~~--------------------~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~ 137 (148)
+.+.+.. .|.+....+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+....++.
T Consensus 89 ~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~ 165 (212)
T 2r15_A 89 VDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCN 165 (212)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEE
T ss_pred EEEEEeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEE
Confidence 5554431 44444432566789999999999999999999999999999998766544
No 24
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.83 E-value=1e-19 Score=124.87 Aligned_cols=117 Identities=22% Similarity=0.353 Sum_probs=100.9
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-------------EEecCCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-------------LYVTRNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-------------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
..+..|+.+.|.|.+.+.|.| .+.|++++ +.......|.|.++..+|+|.|+|.+.|..
T Consensus 222 ~~v~~G~~v~l~C~~~g~p~p--------~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 293 (388)
T 2v5m_A 222 LELMVAHTISLLCPAQGFPAP--------SFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSV 293 (388)
T ss_dssp EEEETTSCEEECCCCEEESCC--------EEEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSS
T ss_pred eEEeeCCcEEEEEECCCCCCC--------EEEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCC
Confidence 456779999999999988887 69999963 112235689999999999999999999999
Q ss_pred CCcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecC
Q psy6361 75 GSTSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQ 133 (148)
Q Consensus 75 ~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~ 133 (148)
+..+..+.|.|..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++||..+...
T Consensus 294 g~~~~~~~l~V~~~p~~~~~-~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~ 351 (388)
T 2v5m_A 294 GGESVETVLTVTAPLSAKID-PPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS 351 (388)
T ss_dssp CEEEEEEEEEEEEEEEEEEE-SSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSCC
T ss_pred CceeEEEEEEEeCCCccccC-CCcEEecCCCCEEEEEEeccccCCeEEEEECCEECccC
Confidence 98888888999888888777 77888999999999999999999999999999998654
No 25
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.83 E-value=2.1e-19 Score=112.19 Aligned_cols=117 Identities=13% Similarity=0.188 Sum_probs=95.6
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEee-CCE-----------EecCCceEEEecCCCCCCEEEEEEEEe
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLK-DLL-----------YVTRNGSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~-~~~-----------~~~~~~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
.....+..|+.+.|.|.+.+.+. .+.|++ ++. .......|.|.++..+|+|.|+|.+.+
T Consensus 9 ~~~~~v~~G~~v~L~C~~~~~p~---------~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 79 (189)
T 2v44_A 9 LSKVELSVGESKFFTCTAIGEPE---------SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATD 79 (189)
T ss_dssp CSEEEEETTCCEEEEEEEEECCS---------EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCceEEecCCcEEEEEEeecCCe---------eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEe
Confidence 34678899999999999977644 499999 541 111124899999999999999999999
Q ss_pred CCCCc-EEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEee
Q psy6361 73 AAGST-SKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLR 131 (148)
Q Consensus 73 ~~~~~-~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~ 131 (148)
..+.. +..+.|.|..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++++..+.
T Consensus 80 ~~g~~~~~~~~l~v~~~p~~~~~-~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~ 138 (189)
T 2v44_A 80 AKGQTQEATVVLEIYQKLTFREV-VSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVT 138 (189)
T ss_dssp TTSCEEEEEEEEEEECCCEEESC-CCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CE
T ss_pred CCCCcEEEEEEEEEecCCceeec-CCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEe
Confidence 87764 67778888888988876 677889999999999999999999999999998875
No 26
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.83 E-value=1.9e-19 Score=129.55 Aligned_cols=122 Identities=22% Similarity=0.309 Sum_probs=102.4
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe-----------cCCceEEEecCCCCCCEEEEEEEEeCCCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV-----------TRNGSFVINNIAEKDTNVYTCTVSNAAGS 76 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~-----------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 76 (148)
..+..|+.+.|.|.+.+.+.| .++|+|++... .....|.|.++..+|+|.|+|.+.|..+.
T Consensus 207 ~~v~~G~~~~l~C~~~g~p~p--------~i~W~k~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~ 278 (570)
T 3b43_A 207 VDLALGESGTFKCHVTGTAPI--------KITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGK 278 (570)
T ss_dssp BCCBSBSCEEEEEEEESSSCC--------EEEEEETTEECCTTSSEEEEEETTEEEEEESSBCGGGCEEEEEEEEETTEE
T ss_pred eEecCCCeEEEEEEEEECCCC--------EEEEEECCEECcCCCcEEEEEECCEEEEEEcccCcccCEEEEEEEECCCCc
Confidence 346779999999999998877 69999997221 22357999999999999999999999998
Q ss_pred cEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceE
Q psy6361 77 TSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYI 137 (148)
Q Consensus 77 ~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~ 137 (148)
.+..+.|.|..+|.+.........+.+|+.+.|.|.+.|.|.|.+.|+|+|..+....++.
T Consensus 279 ~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~ 339 (570)
T 3b43_A 279 DSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFR 339 (570)
T ss_dssp EEEEEEECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEE
T ss_pred EEEEEEEEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEE
Confidence 8888889998899887652334557899999999999999999999999999998776654
No 27
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.83 E-value=9.7e-19 Score=111.21 Aligned_cols=128 Identities=11% Similarity=0.207 Sum_probs=94.0
Q ss_pred eeeEeeeccceeeeeecc-cCCCCcCCCCccEEEEeeCCEEec-------------CCceEEEecCCCCCCEEEEEEEEe
Q psy6361 7 VEQAMLLDLIPMHSRYNY-TNLPQSRNPGQVIKRYLKDLLYVT-------------RNGSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~-~~~p~~~~~~~~~v~W~~~~~~~~-------------~~~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
...+..|+.+.|.|.+.. .|.| .++|+|++.... ....|.|.++..+|+|.|+|.+.|
T Consensus 11 ~~~v~eg~~v~l~c~~~~~~P~p--------~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N 82 (207)
T 3rbs_A 11 AVEILEKGQVRFWMQAEKLSGNA--------KVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD 82 (207)
T ss_dssp EEEECGGGCEEEEEECSCCCSCC--------EEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE
T ss_pred ceEEEeCCeEEEEEEEecCCCCC--------EEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC
Confidence 467888999999999975 4666 799999983221 112699999999999999999999
Q ss_pred CCCCcEEEEEEEEe---------------------cCCEEEeCCCceEEEecCCcEEEEeeeecc-cCCeEEEEECCEEe
Q psy6361 73 AAGSTSKTIQMNVL---------------------VPPFFKDEQQESVAIVVNHPMNISCSHYGV-PTPDFSWYKDGSLL 130 (148)
Q Consensus 73 ~~~~~~~~~~l~v~---------------------~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~~~~W~~~g~~l 130 (148)
+.......+.+. .+|.+... . ...+.+|+.+.|.|.+.|. |.|.+.|+|||..+
T Consensus 83 --g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~-~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l 158 (207)
T 3rbs_A 83 --GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEY-L-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREI 158 (207)
T ss_dssp --TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEE-E-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEE
T ss_pred --CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEec-C-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEEC
Confidence 333333333211 25777655 3 4778899999999999998 99999999999999
Q ss_pred ecCCceE----EEEEEEEee
Q psy6361 131 RIQSHYI----TFFLFFQRL 146 (148)
Q Consensus 131 ~~~~~~~----~~~l~~~~~ 146 (148)
..+.++. ...|.|..+
T Consensus 159 ~~~~~~~~~~~~~~L~I~~v 178 (207)
T 3rbs_A 159 SVDEKHDFKDGICTLLITEF 178 (207)
T ss_dssp CCCCCCCCSSEEEEEEETTC
T ss_pred CCCCceEcCCCEEEEEECCC
Confidence 7654332 234666543
No 28
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.82 E-value=3.5e-19 Score=122.42 Aligned_cols=118 Identities=21% Similarity=0.412 Sum_probs=100.3
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec-------------CCceEEEecCCCCCCEEEEEEEEeC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT-------------RNGSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~-------------~~~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
...+..|+.+.|.|.+.+.+.| .+.|++++.... ....|.|.++..+|+|.|+|.+.|.
T Consensus 221 ~~~~~~G~~v~l~C~~~g~p~~--------~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 292 (395)
T 1bih_A 221 DMMAKAGDVTMIYCMYGSNPMG--------YPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNG 292 (395)
T ss_dssp SEEEETTSCEEEEEEEECSSCC--------CCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCS
T ss_pred ceEEECCCcEEEEEEeccCCCC--------eEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeC
Confidence 4567889999999999988887 599999983221 1237999999999999999999999
Q ss_pred CCCcEE-EEEEEEecCCEEEeCCCce-EEEecCCcEEEEeeeecccCCeEEEEECCEEeecC
Q psy6361 74 AGSTSK-TIQMNVLVPPFFKDEQQES-VAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQ 133 (148)
Q Consensus 74 ~~~~~~-~~~l~v~~~p~~~~~~~~~-~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~ 133 (148)
.+.... .+.|.|..+|.+... +.. ..+.+|+.+.|.|.+.|.|.|.+.|+++|..+...
T Consensus 293 ~g~~~~~~~~l~V~~~P~~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~ 353 (395)
T 1bih_A 293 VGKPQKHSLKLTVVSAPKYEQK-PEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG 353 (395)
T ss_dssp SSSCEEEEEEEEEEEEEEEEEC-CCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS
T ss_pred CCCceEEEEEEEEEcCCccccC-CCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC
Confidence 887544 888999999998877 665 78899999999999999999999999999998654
No 29
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.82 E-value=2e-19 Score=113.88 Aligned_cols=116 Identities=16% Similarity=0.214 Sum_probs=90.9
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC------E--EecCCceEEEecCCCCCCEEEEEEEEeCCCCcEE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL------L--YVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSK 79 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~------~--~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 79 (148)
..+..|+.+.|.|.+.+.|.| .+.|++.. . .......|.|.+++.+|+|.|.|.+.|..+..+.
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p--------~i~W~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~ 82 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESP--------FFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEK 82 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSC--------EEEEEETTCCCCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEE
T ss_pred EEEcCCCcEEEEEeecCCCCC--------eEEEECCCCCCccceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEee
Confidence 345589999999999988877 69999842 1 2223457999999999999999999998877777
Q ss_pred EEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeeccc-C--CeEEEEECCEEeec
Q psy6361 80 TIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVP-T--PDFSWYKDGSLLRI 132 (148)
Q Consensus 80 ~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p-~--~~~~W~~~g~~l~~ 132 (148)
.+.|.|..+|..... .....+.+|+.+.|.|.+.+.+ . +.+.|+|+|..+..
T Consensus 83 ~~~l~V~~~p~~~~~-~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~ 137 (202)
T 1vca_A 83 GIQVEIYSFPKDPEI-HLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKS 137 (202)
T ss_dssp EEEEEEEBCCSCCEE-EESSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEE
T ss_pred EEEEEEEeCCCCCEe-CCceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcc
Confidence 888888876654333 2225688999999999998754 3 37899999998754
No 30
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.82 E-value=4.6e-19 Score=118.09 Aligned_cols=124 Identities=19% Similarity=0.304 Sum_probs=100.6
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec-------------CCceEEEecCCCCCCEEEEEEEEe
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT-------------RNGSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~-------------~~~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
....+..|+.+.|.|.+.+.+.| .+.|++++.... ....|.|.+++.+|+|.|+|.+.|
T Consensus 12 ~~~~v~~G~~v~l~C~~~g~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 83 (305)
T 2nzi_A 12 RNLNVRYQSNATLVCKVTGHPKP--------IVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATN 83 (305)
T ss_dssp CCEEECTTCCEEEEEEEECSSCC--------EEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEE
T ss_pred cceEEeCCCcEEEEEEEeCCCCC--------eEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEc
Confidence 35678899999999999888877 699999872211 113899999999999999999999
Q ss_pred CCCCcEEEEEEEEecCCEEEeCC----CceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceE
Q psy6361 73 AAGSTSKTIQMNVLVPPFFKDEQ----QESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYI 137 (148)
Q Consensus 73 ~~~~~~~~~~l~v~~~p~~~~~~----~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~ 137 (148)
..+.....+.|.|..+|.+.... +....+.+|+.+.|.|.+.|.|.+.+.|++++..+....++.
T Consensus 84 ~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~ 152 (305)
T 2nzi_A 84 QGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQ 152 (305)
T ss_dssp TTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCE
T ss_pred CCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEE
Confidence 98877778888887766654321 245778899999999999999999999999999887665554
No 31
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.82 E-value=7.9e-19 Score=117.08 Aligned_cols=119 Identities=18% Similarity=0.287 Sum_probs=96.0
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe----------cC--CceEEEecCCC-CCCEEEEEEEEe
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV----------TR--NGSFVINNIAE-KDTNVYTCTVSN 72 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~----------~~--~~~l~i~~~~~-~d~g~y~C~~~~ 72 (148)
....+..|+.+.|.|.+.+.+.| .+.|++++... .. ...|.|.++.. +|+|.|+|.+.|
T Consensus 14 ~~~~v~~G~~v~l~C~~~g~p~~--------~i~W~k~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n 85 (304)
T 2yd9_A 14 KDQIGVSGGVASFVCQATGDPKP--------RVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQN 85 (304)
T ss_dssp CCEEEETTSCEEEEEEEECSSCC--------EEEEC-------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEEC
T ss_pred CceEecCCCeEEEEEEEEEeCCC--------eEEEEECCEECCCCceEEEEecCCCceEEEEecccccCCCeEEEEEEEC
Confidence 35678899999999999988777 69999987111 11 15799999997 999999999999
Q ss_pred CCCCcEEEEEEEEecC-------CEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecC
Q psy6361 73 AAGSTSKTIQMNVLVP-------PFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQ 133 (148)
Q Consensus 73 ~~~~~~~~~~l~v~~~-------p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~ 133 (148)
..+..+..+.|.|... |.+... +....+.+|+.+.|.|.+.|.|.+.+.|+++|..+...
T Consensus 86 ~~g~~~~~~~l~V~~~~~~p~~~p~i~~~-~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~ 152 (304)
T 2yd9_A 86 SVGEITVHAKLTVLREDQLPSGFPNIDMG-PQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPS 152 (304)
T ss_dssp SSCEECCEEEEEEECGGGCCTTCCEEEEC-CCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGG
T ss_pred CCCeEEEEEEEEEeccccCCCCCCeeecC-CccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCC
Confidence 8887777778888754 677766 77788999999999999999999999999999988653
No 32
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.82 E-value=1.5e-19 Score=114.42 Aligned_cols=119 Identities=24% Similarity=0.411 Sum_probs=96.6
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE-------------------EecCCceEEEecCCCCCCEE
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL-------------------YVTRNGSFVINNIAEKDTNV 65 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~-------------------~~~~~~~l~i~~~~~~d~g~ 65 (148)
.....+..|+.+.|.|.+.+.+.+ .+.|++++. .......|.|.++..+|+|.
T Consensus 8 ~~~~~v~~G~~v~L~C~~~~~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~ 79 (212)
T 1f97_A 8 QSDVQVPENESIKLTCTYSGFSSP--------RVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGE 79 (212)
T ss_dssp CSEEEEETTCCEEEECEEESCSSE--------EEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEE
T ss_pred CCCeEEEcCCCEEEEeEeCCCCCc--------EEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeE
Confidence 346778899999999999987766 699999751 11223679999999999999
Q ss_pred EEEEEEeCCC--CcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEee-eecccCCeEEEEECCE-Eeec
Q psy6361 66 YTCTVSNAAG--STSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCS-HYGVPTPDFSWYKDGS-LLRI 132 (148)
Q Consensus 66 y~C~~~~~~~--~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~-~~g~p~~~~~W~~~g~-~l~~ 132 (148)
|+|.+.+..+ .....+.|.|..+|.+... +....+.+|+.+.|.|. +.+.|.|.+.|++++. .+..
T Consensus 80 Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~ 149 (212)
T 1f97_A 80 YTCMVSEEGGQNYGEVSIHLTVLVPPSKPTI-SVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTA 149 (212)
T ss_dssp EEEEEEETTSSSEEEEEEEEEEEBCCCCCEE-ECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-
T ss_pred EEEEEEccCCCcccEEEEEEEEEcCCCCccc-CCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccc
Confidence 9999999876 3566778888888877655 45567889999999999 7999999999999999 7764
No 33
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.81 E-value=2.1e-18 Score=111.37 Aligned_cols=120 Identities=21% Similarity=0.357 Sum_probs=96.7
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE------------EecCCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL------------YVTRNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~------------~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
...+..|+.+.|.|.+.+.+.+ .+.|++++. .......|.|.+++.+|+|.|+|.+.+..
T Consensus 24 ~~~v~~G~~v~L~C~~~~~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 95 (241)
T 3grw_A 24 LLAVPAANTVRFRCPAAGNPTP--------SISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKF 95 (241)
T ss_dssp EEEEETTSEEEEECCEECSSCC--------EEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETT
T ss_pred ceEEcCCCeEEEEEEecCCCCc--------eeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecC
Confidence 4678899999999999988776 699999972 22334579999999999999999999988
Q ss_pred CCcEEEEEEEEec----CCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEE----CCEEeecCC
Q psy6361 75 GSTSKTIQMNVLV----PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYK----DGSLLRIQS 134 (148)
Q Consensus 75 ~~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~----~g~~l~~~~ 134 (148)
+.......+.|.. .|.+....+....+.+|+.+.|.|.+.+.|.+.+.|++ +|..+....
T Consensus 96 ~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~ 163 (241)
T 3grw_A 96 GSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDG 163 (241)
T ss_dssp EEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTT
T ss_pred CceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCC
Confidence 8777777777764 23333332566778899999999999999999999999 888776543
No 34
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.81 E-value=1.2e-18 Score=115.24 Aligned_cols=119 Identities=13% Similarity=0.210 Sum_probs=98.7
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEee-CCEE-------------ecCCceEEEecCCCCCCEEEEEEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLK-DLLY-------------VTRNGSFVINNIAEKDTNVYTCTVS 71 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~-~~~~-------------~~~~~~l~i~~~~~~d~g~y~C~~~ 71 (148)
....+..|+.+.|.|.+.+.+.+. .+.|++ ++.. ......|.|.++..+|+|.|+|.+.
T Consensus 10 ~~~~v~~G~~v~l~C~~~~~~~~~-------~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~ 82 (291)
T 1qz1_A 10 SQGEISVGESKFFLCQVAGDAKDK-------DISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVT 82 (291)
T ss_dssp SSEEEETTCCEEEEEEESSCCSCC-------EEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCceEeCCCeEEEEEEeCCCCCCc-------EeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEE
Confidence 345788999999999999876322 799999 5511 1234689999999999999999999
Q ss_pred eCCCC-cEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeec
Q psy6361 72 NAAGS-TSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 72 ~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~ 132 (148)
+..+. .+..+.|.|..+|.+... +....+.+|+.+.|.|.+.+.|.+.+.|+++|..+..
T Consensus 83 n~~g~~~~~~~~l~v~~~~~~~~~-~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~ 143 (291)
T 1qz1_A 83 AEDGTQSEATVNVKIFQKLMFKNA-PTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVIL 143 (291)
T ss_dssp CTTSCEEEEEEEEEEECCSEEEEC-CSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSST
T ss_pred cCCCCeeEEEEEEEeeccccccCC-CCcccccCCCeEEEEEEeccCCCCEEEEEECCEEccc
Confidence 98864 566778888888988887 7788899999999999999999999999999987653
No 35
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.81 E-value=4.7e-19 Score=112.39 Aligned_cols=113 Identities=12% Similarity=0.296 Sum_probs=91.6
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec-CCceEEEecCCCCCCEEEEEEEEeCCCCcEEEEEEEEe
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT-RNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVL 86 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 86 (148)
..+..|+.+.|.|.+.+.+.+. .+.|+|++.... ....|.|.+++.+|+|.|+|.+.|.. .+..+.|.|.
T Consensus 17 ~~v~~G~~v~L~C~~~~~p~~~-------~v~W~k~g~~l~~~~~~L~i~~v~~~D~G~Y~C~a~n~~--~s~~~~l~V~ 87 (204)
T 3sgj_C 17 YRVLEKDSVTLKCQGAYSPEDQ-------STQWFHNESLISSQASSYFIDAATVDDSGEYRCQTQLST--LSDPVQLEVH 87 (204)
T ss_dssp SEEETTCCEEEEEECCSSSSCC-------CEEEEETTEEESCCSSEEEESSCCGGGCEEEEEEETTSB--CCCCEEEEEE
T ss_pred eEEECCCCEEEEEcCCCCCCCc-------EEEEEECCEEcccCccEEEEecccccCCEEEEEEeCCCc--ccccEEEEEe
Confidence 4688999999999999987764 599999984443 34799999999999999999998743 3445677887
Q ss_pred cCCEEEeCCCceEEEecCCcEEEEeeeecc-cCCeEEEEECCEEee
Q psy6361 87 VPPFFKDEQQESVAIVVNHPMNISCSHYGV-PTPDFSWYKDGSLLR 131 (148)
Q Consensus 87 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~~~~W~~~g~~l~ 131 (148)
.+|.+... +. ..+.+|+.+.|.|.+.+. |.+.+.|++||..+.
T Consensus 88 ~~p~~~~~-~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~ 131 (204)
T 3sgj_C 88 IGWLLLQA-PR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRK 131 (204)
T ss_dssp CSSEEEEC-SC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEE
T ss_pred cCceEecC-Cc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEee
Confidence 77776655 33 678899999999999655 567899999999875
No 36
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.81 E-value=7.5e-19 Score=111.64 Aligned_cols=117 Identities=13% Similarity=0.179 Sum_probs=91.2
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E--------------------EecCCceEEEecCCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L--------------------YVTRNGSFVINNIAEK 61 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~--------------------~~~~~~~l~i~~~~~~ 61 (148)
...+..|+.+.|.|.+.+.+.+ .+.|+|.. . .......|.|.+++.+
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 80 (213)
T 3mj8_L 9 LVSVALGQKATITCSGDKLSDV--------YVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAG 80 (213)
T ss_dssp EEEEETTSCEEEEEECSSTTTS--------CEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred cEEEeCCCCEEEEEEcCCCCCc--------eEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChh
Confidence 6788999999999999977777 59999821 1 1223456999999999
Q ss_pred CCEEEEEEEEeCCC---CcEEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEeeeecc-cC-CeEEEEECCEEeec
Q psy6361 62 DTNVYTCTVSNAAG---STSKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCSHYGV-PT-PDFSWYKDGSLLRI 132 (148)
Q Consensus 62 d~g~y~C~~~~~~~---~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-~~~~W~~~g~~l~~ 132 (148)
|+|.|.|.+.+..+ .......|.|. .+|.+... +......+|+.+.|.|.+.|. |. +.+.|++||..+..
T Consensus 81 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 159 (213)
T 3mj8_L 81 DEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLF-PPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQ 159 (213)
T ss_dssp GCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEE-CCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred hCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEcc-CCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCC
Confidence 99999999999877 34455677887 67777665 444445589999999999885 33 49999999999864
No 37
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.81 E-value=6.3e-19 Score=117.56 Aligned_cols=119 Identities=24% Similarity=0.343 Sum_probs=96.0
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE-----------ecCCceEEEecCCCCCCEEEEEEEEeCCCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY-----------VTRNGSFVINNIAEKDTNVYTCTVSNAAGS 76 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~-----------~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 76 (148)
..+..|+.+.|.|.+.+.+.| .+.|++++.. ......|.|.++..+|+|.|+|.+.|..+.
T Consensus 118 ~~v~~g~~v~l~C~~~g~p~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 189 (304)
T 2yd9_A 118 KVVERTRTATMLCAASGNPDP--------EITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGV 189 (304)
T ss_dssp EEEETTSCEEECCEEECSSCC--------EEEEEETTEECCGGGGTTSEEECTTSCEEECSCCGGGCEEEEEEEEETTEE
T ss_pred EEEeCCCeEEEEEECccCCCC--------eEEEEECCEECcCCCCcceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCC
Confidence 457779999999999988877 6999999722 334558999999999999999999998876
Q ss_pred cEE-EEEEEEe---cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCc
Q psy6361 77 TSK-TIQMNVL---VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSH 135 (148)
Q Consensus 77 ~~~-~~~l~v~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~ 135 (148)
... ...+.|. .+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+++|..+.....
T Consensus 190 ~~~~~~~l~v~~~~~~P~~~~~-~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~ 251 (304)
T 2yd9_A 190 RYSSPANLYVRVQNVAPRFSIL-PMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDD 251 (304)
T ss_dssp EECCCEEEEEECCCEEEEEEEC-CCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSS
T ss_pred EEeccEEEEEEeeccCCcEEec-CCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCccc
Confidence 332 2445553 46777766 6667788999999999999999999999999999876543
No 38
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.81 E-value=3.7e-19 Score=124.05 Aligned_cols=116 Identities=13% Similarity=0.096 Sum_probs=94.2
Q ss_pred eeeEeeeccceeeeeecc-cCCCCcCCCCccEEEEeeCCEEe-----------------cCCceEEEecCCCCCCEEEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNY-TNLPQSRNPGQVIKRYLKDLLYV-----------------TRNGSFVINNIAEKDTNVYTC 68 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~-~~~p~~~~~~~~~v~W~~~~~~~-----------------~~~~~l~i~~~~~~d~g~y~C 68 (148)
...+..|+.+.|.|.+.+ .+.| .+.|+|++... .....|.|.++..+|+|.|+|
T Consensus 236 ~~~v~~G~~v~L~C~~~g~~p~p--------~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 307 (423)
T 3qs7_E 236 QLFLKVGEPLWIRCKAVHVNHGF--------GLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTC 307 (423)
T ss_dssp EEEEETTSCEEEEEEEEESSSCC--------CEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEE
T ss_pred ceEEeCCCeEEEEEEEEcCCCCc--------EEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEE
Confidence 456788999999999998 4556 59999987211 112369999999999999999
Q ss_pred EEEeCCCCcEEEEEEEEecCCEEEeCCC--ceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCC
Q psy6361 69 TVSNAAGSTSKTIQMNVLVPPFFKDEQQ--ESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQS 134 (148)
Q Consensus 69 ~~~~~~~~~~~~~~l~v~~~p~~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~ 134 (148)
.|.|. .+..+.|.|..+|.+... + ....+.+|+.+.|.|.+.|.|.|.+.|+|||..+....
T Consensus 308 ~A~N~---~~~~~~L~V~~~p~i~~~-~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~ 371 (423)
T 3qs7_E 308 SSSKH---PSQSALVTIVEKGFINAT-NSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQ 371 (423)
T ss_dssp EETTE---EEEEEEEEEESSCEEEEC----CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBC
T ss_pred EEecC---CCceEEEEEEeCCcceEc-CCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCcc
Confidence 99887 667788888888887655 3 34567789999999999999999999999999997653
No 39
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.80 E-value=3e-18 Score=109.78 Aligned_cols=120 Identities=21% Similarity=0.393 Sum_probs=96.3
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE------------ecCCceEEEecCCCCCCEEEEEEEEeC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY------------VTRNGSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~------------~~~~~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
....+..|+.+.|.|.+.+.+.| .+.|++++.. ......|.|.+++.+|+|.|+|.+.+.
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 98 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMP--------TMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENE 98 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCC--------EEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEET
T ss_pred eeEEEccCCCEEEEEecccCCCC--------eEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecc
Confidence 45678899999999999988777 6999999722 223347999999999999999999998
Q ss_pred CCCcEEEEEEEEec----CCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEE----CCEEeecC
Q psy6361 74 AGSTSKTIQMNVLV----PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYK----DGSLLRIQ 133 (148)
Q Consensus 74 ~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~----~g~~l~~~ 133 (148)
.+.......+.|.. +|.+....+....+.+|+.+.|.|.+.+.|.+.+.|++ +|..+..+
T Consensus 99 ~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~ 166 (231)
T 3ojm_B 99 YGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPD 166 (231)
T ss_dssp TEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTT
T ss_pred cCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCC
Confidence 88777777788764 23333322566788999999999999999999999999 88776543
No 40
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.80 E-value=1.1e-18 Score=108.04 Aligned_cols=113 Identities=12% Similarity=0.266 Sum_probs=90.4
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE-EecCCceEEEecCCCCCCEEEEEEEEeCCCCcEEEEEEEEe
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL-YVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVL 86 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 86 (148)
..+..|+.+.|.|.+.+.+.|. .+.|+|++. .......|.|.+++.+|+|.|+|.+.+... +..+.|.|.
T Consensus 17 ~~v~~G~~v~L~C~~~~~p~~~-------~~~W~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~--s~~~~l~V~ 87 (175)
T 1fnl_A 17 YSVLEKDSVTLKCQGAYSPEDN-------STQWFHNESLISSQASSYFIDAATVNDSGEYRCQTNLSTL--SDPVQLEVH 87 (175)
T ss_dssp SEEETTCCEEEEEECCCBTTBC-------CCEEEETTEEEESSCSEEEESSCCGGGCEEEEEECSSSCC--CCCEEEEEE
T ss_pred eeeeCCCcEEEEeeCCCCCCCc-------ceEEEECCEEccCCceEEEEeCCCcccCEEEEEEeeCCcc--cccEEEEEe
Confidence 4788999999999999987774 488999983 445678999999999999999999987554 344567776
Q ss_pred cCCEEEeCCCceEEEecCCcEEEEeeeecccCC-eEEEEECCEEee
Q psy6361 87 VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTP-DFSWYKDGSLLR 131 (148)
Q Consensus 87 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~~~W~~~g~~l~ 131 (148)
.++..... ....+.+|+.+.|.|.+.+.+.+ .+.|+|+|..+.
T Consensus 88 ~~~~~~~~--~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~ 131 (175)
T 1fnl_A 88 IGWLLLQA--PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRK 131 (175)
T ss_dssp CSSEEEEC--SCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEE
T ss_pred CCCceeeC--CCceecCCCCEEEEEEcCCCCCceEEEEEECCeEcc
Confidence 55554433 34668899999999999877654 999999999875
No 41
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.80 E-value=2.4e-18 Score=113.85 Aligned_cols=132 Identities=23% Similarity=0.349 Sum_probs=100.7
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE----------EecCCceEEEecCCCCCCEEEEEEEEeCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL----------YVTRNGSFVINNIAEKDTNVYTCTVSNAAG 75 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~----------~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 75 (148)
....+..|+.+.|.|.+.+.+.| .+.|++++. .......|.|.++..+|+|.|+|.+.+..+
T Consensus 106 ~~~~v~~G~~v~l~C~~~~~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~ 177 (291)
T 2wim_A 106 SPQEFKQGEDAEVVCRVSSSPAP--------AVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEAR 177 (291)
T ss_dssp CSEEEETTSCEEECCCCBCSSCC--------EEEEECC----CBCCCSSEEECTTSCEEETTCCGGGCEEEEEEEEETTT
T ss_pred CChhhcCCCCEEEEEEEccCCCC--------EEEEEECCccccccCCceEEEccCCCEEEEecchhhCEEEEEEEEECCC
Confidence 34567899999999999988877 699999872 223456799999999999999999999875
Q ss_pred C--cEEEEEEEEecCCEEEeCCCc--eEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceEE----EEEEEEee
Q psy6361 76 S--TSKTIQMNVLVPPFFKDEQQE--SVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYIT----FFLFFQRL 146 (148)
Q Consensus 76 ~--~~~~~~l~v~~~p~~~~~~~~--~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~~----~~l~~~~~ 146 (148)
. ....+.+.+..+|.+... +. ...+.+|+.+.|.|.+.|.|.|.+.|+++|..+....++.. ..|.|..+
T Consensus 178 ~~~~~~~~~~~v~~~p~~~~~-~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~ 255 (291)
T 2wim_A 178 GEIDFRDIIVIVNVPPAISMP-QKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNI 255 (291)
T ss_dssp TEEEEEEEEEEEEBCCCCBCS-CSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEECSTTCEEEEESC
T ss_pred CeeEEeeEEEEeccCCccccC-cccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEcCCccEEEEeeC
Confidence 4 334566777778877655 33 33566899999999999999999999999999876655432 24555543
No 42
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.80 E-value=5.6e-19 Score=112.22 Aligned_cols=118 Identities=13% Similarity=0.167 Sum_probs=89.1
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E--------------------EecCCceEEEecCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L--------------------YVTRNGSFVINNIAE 60 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~--------------------~~~~~~~l~i~~~~~ 60 (148)
....+..|+.+.|.|.+.+.+.| .+.|+|+. . .......|.|.+++.
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 80 (213)
T 3nl4_L 9 ASVSEPVGGTVTIKCQASQSISS--------YLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLEC 80 (213)
T ss_dssp SEEEEETTCCEEEEEEESSCCTT--------CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCG
T ss_pred CeEEEcCCCCEEEEEEecCCCCc--------eEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCCh
Confidence 35678999999999999998766 59999841 0 111233799999999
Q ss_pred CCCEEEEEEEEeCCCC---cEEEEEEEEe---cCCEEEeCCCceEEEecCCcEEEEeeeec-ccCCeEEEEECCEEeec
Q psy6361 61 KDTNVYTCTVSNAAGS---TSKTIQMNVL---VPPFFKDEQQESVAIVVNHPMNISCSHYG-VPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 61 ~d~g~y~C~~~~~~~~---~~~~~~l~v~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~~~~W~~~g~~l~~ 132 (148)
+|+|.|.|.+.+..+. ......+.|. .+|.+... +....+.+|+.+.|.|.+.+ .|.|.+.|+++|..+..
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~-~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~ 158 (213)
T 3nl4_L 81 ADAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIF-PPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTT 158 (213)
T ss_dssp GGCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEE-CCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCS
T ss_pred HHCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEe-CCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCC
Confidence 9999999999987652 2334456663 56666554 33344557899999999988 89999999999998864
No 43
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.80 E-value=7e-18 Score=106.05 Aligned_cols=123 Identities=16% Similarity=0.225 Sum_probs=89.8
Q ss_pred CCCcceeeeEeeeccceeeeeeccc-CCCCcCCCCccEEEEeeCCEEe--------------------------cCCceE
Q psy6361 1 MSGTMNVEQAMLLDLIPMHSRYNYT-NLPQSRNPGQVIKRYLKDLLYV--------------------------TRNGSF 53 (148)
Q Consensus 1 ~~~~~~~~~~~~g~~~~l~C~~~~~-~~p~~~~~~~~~v~W~~~~~~~--------------------------~~~~~l 53 (148)
||.......+..|+.+.|.|.+.+. +.+ .+.|++++... ..+.+|
T Consensus 1 ~s~~p~~v~~~~G~~v~L~C~~~~~~~~~--------~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL 72 (193)
T 2if7_A 1 MSLTPLMVNGILGESVTLPLEFPAGEKVN--------FITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSL 72 (193)
T ss_dssp --CCCEEEEEETTSCEEECCCCCCCSCCC--------EEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCE
T ss_pred CCCCCeEEEEEecCeEEEeccCCCccccc--------EEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEE
Confidence 5677778899999999999998753 333 69999986210 124579
Q ss_pred EEecCCCCCCEEEEEEEEeCCCCcEEEEEEEEecCCE---EEeCCCceEEEecCC-cEEEEeeeecc-cCCeEEEEECCE
Q psy6361 54 VINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLVPPF---FKDEQQESVAIVVNH-PMNISCSHYGV-PTPDFSWYKDGS 128 (148)
Q Consensus 54 ~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~p~---~~~~~~~~~~~~~g~-~~~l~C~~~g~-p~~~~~W~~~g~ 128 (148)
.|.+++.+|+|.|.|.+.+..+.....+.|.|..++. +... . .....|. .+.|.|.+.+. |.|.+.|+++|.
T Consensus 73 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~-~--~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~ 149 (193)
T 2if7_A 73 QLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNH-S--QLFQNMTCELHLTCSVEDADDNVSFRWEALGN 149 (193)
T ss_dssp EECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCEEEEEEEC-C--C---CSSEEEEEEEEEESCCTTCEEEEEETTE
T ss_pred EECCCCcccCceEEEEEEecCCCeEEEEEEEEEccCCCCeEecC-c--eeecCCCceEEEEEEEecCCCceEEEEEeCCE
Confidence 9999999999999999999887655677888875543 3322 1 1223455 79999999885 588999999998
Q ss_pred EeecCC
Q psy6361 129 LLRIQS 134 (148)
Q Consensus 129 ~l~~~~ 134 (148)
.+....
T Consensus 150 ~l~~~~ 155 (193)
T 2if7_A 150 TLSSQP 155 (193)
T ss_dssp EEESSS
T ss_pred EcCCCC
Confidence 876543
No 44
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.80 E-value=4.6e-20 Score=116.58 Aligned_cols=120 Identities=20% Similarity=0.359 Sum_probs=96.6
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE-------------------ecCCceEEEecCCCCCCEE
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY-------------------VTRNGSFVINNIAEKDTNV 65 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~-------------------~~~~~~l~i~~~~~~d~g~ 65 (148)
.....+..|+.+.|.|.+.+.+.+ .+.|++++.. ......|.|.++..+|+|.
T Consensus 11 ~~~~~v~~G~~v~L~C~~~~~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~ 82 (209)
T 1nbq_A 11 EPEVRIPENNPVKLSCAYSGFSSP--------RVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGT 82 (209)
T ss_dssp CSBCCEETTCCCEEECEEESCSSE--------EEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSE
T ss_pred CCceEEEcCCCEEEEEEEeCCCCc--------EEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcE
Confidence 345678899999999999987766 6999997511 1122679999999999999
Q ss_pred EEEEEEeCCCC--cEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeee-ecccCCeEEEEECCEEeecC
Q psy6361 66 YTCTVSNAAGS--TSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSH-YGVPTPDFSWYKDGSLLRIQ 133 (148)
Q Consensus 66 y~C~~~~~~~~--~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~~~W~~~g~~l~~~ 133 (148)
|+|.+.+..+. .+..+.|.|..+|.+... .....+.+|+.+.|.|.+ .+.|.|.+.|+++|..+...
T Consensus 83 Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~ 152 (209)
T 1nbq_A 83 YTCMVSEEGGNSYGEVKVKLIVLVPPSKPTV-NIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTN 152 (209)
T ss_dssp EEEEEEETTSSCEECCEEECCEEBCCCCCCC-CCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSC
T ss_pred EEEEEecCCCCccceEEEEEEEecCCcCCCc-ccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCc
Confidence 99999998653 445667778888887766 556678899999999996 89999999999999988754
No 45
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.79 E-value=2.2e-18 Score=114.06 Aligned_cols=120 Identities=22% Similarity=0.291 Sum_probs=96.3
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC----------EEecCCceEEEecCCCCCCEEEEEEEEeCCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL----------LYVTRNGSFVINNIAEKDTNVYTCTVSNAAGS 76 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~----------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 76 (148)
...+..|+.+.|.|.+.+.+.| .+.|++++ ........|.|.++..+|+|.|+|.+.|..+.
T Consensus 109 ~~~~~~g~~v~l~C~~~~~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 180 (291)
T 1qz1_A 109 PQEFKEGEDAVIVCDVVSSLPP--------TIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARG 180 (291)
T ss_dssp SEEEETTSCEEECCEEECSSCC--------EEEEEETTSCSSTTCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGT
T ss_pred cccccCCCeEEEEEEeccCCCC--------EEEEEECCEEcccCCCceEEEccCCcEEEccCccccCeEEEEEEEecCCC
Confidence 4567889999999999988777 69999987 23345678999999999999999999987643
Q ss_pred --cEEEEEEEEecCCEEEeCC-CceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCC
Q psy6361 77 --TSKTIQMNVLVPPFFKDEQ-QESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQS 134 (148)
Q Consensus 77 --~~~~~~l~v~~~p~~~~~~-~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~ 134 (148)
....+.+.+..+|.+.... +....+.+|+.+.|.|.+.|.|.|.+.|+++|..+....
T Consensus 181 ~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~ 241 (291)
T 1qz1_A 181 EINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEE 241 (291)
T ss_dssp EEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC-
T ss_pred ceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCC
Confidence 3455677777788877651 224466789999999999999999999999999987653
No 46
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.79 E-value=1.4e-18 Score=110.64 Aligned_cols=117 Identities=21% Similarity=0.374 Sum_probs=91.5
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec-----------CCceE----EEecCCCCCCEEEEEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT-----------RNGSF----VINNIAEKDTNVYTCTV 70 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~-----------~~~~l----~i~~~~~~d~g~y~C~~ 70 (148)
....+..|+.+.|.|.+.+.+.| .+.|++++.... ....+ .|.+++.+|+|.|+|.+
T Consensus 17 ~~~~v~~G~~v~L~C~~~g~p~~--------~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~~ 88 (217)
T 2vr9_A 17 TDLVVKKNEPATLNCKVEGKPEP--------TIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVA 88 (217)
T ss_dssp CCEEECTTSCEEECCEEECSSCC--------EEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEEE
T ss_pred CceEEeCCCcEEEEEEcCCCCCC--------eEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEEE
Confidence 34678899999999999887776 699999872221 22223 57788999999999999
Q ss_pred EeCCCCc-EEEEEEEEec-CCEEEeCCCceEEEecCCcEEEEeee-ecccCCeEEEEECCEEee
Q psy6361 71 SNAAGST-SKTIQMNVLV-PPFFKDEQQESVAIVVNHPMNISCSH-YGVPTPDFSWYKDGSLLR 131 (148)
Q Consensus 71 ~~~~~~~-~~~~~l~v~~-~p~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~~~W~~~g~~l~ 131 (148)
.+..+.. +....+.|.. +|.+... +....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+.
T Consensus 89 ~n~~g~~~~~~~~l~v~~~~~~~~~~-~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~ 151 (217)
T 2vr9_A 89 KNRVGQAVSRHASLQIAVLRDDFRVE-PKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLD 151 (217)
T ss_dssp EETTEEEECCCEEEEECEECCSCSBC-CCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEEC
T ss_pred ecCCCccccccceEEEEEeCCCcEEC-CCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCC
Confidence 9987653 3345666664 4555555 667788999999999998 899999999999999987
No 47
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.79 E-value=5.4e-18 Score=105.14 Aligned_cols=117 Identities=15% Similarity=0.202 Sum_probs=86.4
Q ss_pred eeeeEeeeccceeeeeecc--cCCCCcCCCCccEEEEeeCCEE------------------ecCCceEEEecCCCCCCEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNY--TNLPQSRNPGQVIKRYLKDLLY------------------VTRNGSFVINNIAEKDTNV 65 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~--~~~p~~~~~~~~~v~W~~~~~~------------------~~~~~~l~i~~~~~~d~g~ 65 (148)
....+..|+.+.|.|.... .+.| .+.|+|++.. ...+..|.|.+++.+|+|.
T Consensus 4 ~~v~~~~G~~v~L~c~~~~~~~~~~--------~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~ 75 (176)
T 1hng_A 4 GTVWGALGHGINLNIPNFQMTDDID--------EVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGT 75 (176)
T ss_dssp EEEEEETTSCEEECCTTCCCCTTEE--------EEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEE
T ss_pred eEEEEEcCCcEEEcCCCCCcccccc--------cEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEE
Confidence 3567899999999995433 3333 6999998721 1234569999999999999
Q ss_pred EEEEEEeCCCCc--EEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCce
Q psy6361 66 YTCTVSNAAGST--SKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHY 136 (148)
Q Consensus 66 y~C~~~~~~~~~--~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~ 136 (148)
|+|.+.|..+.. ...+.|.|..++.. +.....+..+.|.|.+.|.|.|.+.|++||..+....+.
T Consensus 76 Y~C~~~n~~g~~~~~~~~~l~V~~~~~~------p~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~~ 142 (176)
T 1hng_A 76 YNVTVYSTNGTRILNKALDLRILEMVSK------PMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQK 142 (176)
T ss_dssp EEEEEEETTCCEEEEEEEEEEEECCCCC------CEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESSS
T ss_pred EEEEEEeCCCCEEEEEEEEEEEeCCCCC------CEEEecCCcEEEEEEecCCCCcEEEEEECCEECCCCCcE
Confidence 999999988875 55667777643211 111223456999999999999999999999998765543
No 48
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.79 E-value=1.1e-18 Score=109.89 Aligned_cols=111 Identities=14% Similarity=0.158 Sum_probs=76.7
Q ss_pred eEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE----------ecCCceEEEecCCCCCCEEEEEEEEeCCCC--
Q psy6361 9 QAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY----------VTRNGSFVINNIAEKDTNVYTCTVSNAAGS-- 76 (148)
Q Consensus 9 ~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~----------~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~-- 76 (148)
.+..|+.+.|.|.+.+.+. .+.|+|++.. ......|.|.+++.+|+|.|+|.+.|..+.
T Consensus 15 ~v~~G~~v~L~C~~~~~~~---------~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 85 (196)
T 2d3v_A 15 VISRGNSVTIRCQGTLEAQ---------EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSE 85 (196)
T ss_dssp EEETTCCEEEEEECCTTCC---------EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECB
T ss_pred cccCCCeEEEEEeCCCCCc---------EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCCCcCC
Confidence 6789999999999876532 5999998711 123467999999999999999999987653
Q ss_pred cEEEEEEEEec---CCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEee
Q psy6361 77 TSKTIQMNVLV---PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLR 131 (148)
Q Consensus 77 ~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~ 131 (148)
.+..+.|.|.. +|.+... + ...+.+|+.+.|.|.+.+.| +.+.|+|+|..+.
T Consensus 86 ~s~~~~l~V~~~~~~p~i~~~-~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~ 140 (196)
T 2d3v_A 86 PSDPLELVVTGFYNKPTLSAL-P-SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKL 140 (196)
T ss_dssp CCCCEEEEEECSSCCCEEEC-------------CEEEEEESSCC-SEEEEEEC---CC
T ss_pred cCccEEEEecCCCCCCeEEcc-C-CccccCCCcEEEEEEcCCCC-CEEEEEccCCccc
Confidence 24456677764 5666544 3 35788999999999999988 8999999998874
No 49
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.79 E-value=5.1e-18 Score=106.54 Aligned_cols=120 Identities=18% Similarity=0.210 Sum_probs=93.6
Q ss_pred ceeeeEeeeccceeeee-ecccCC-CCcCCCCccEEEEeeCC-----------EEecCCceEEEecCCCCCCEEEEEEEE
Q psy6361 5 MNVEQAMLLDLIPMHSR-YNYTNL-PQSRNPGQVIKRYLKDL-----------LYVTRNGSFVINNIAEKDTNVYTCTVS 71 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~-~~~~~~-p~~~~~~~~~v~W~~~~-----------~~~~~~~~l~i~~~~~~d~g~y~C~~~ 71 (148)
.....+..|+.+.|.|. ..+.+. + .+.|++++ ........|.|.+++.+|+|.|+|.+.
T Consensus 15 ~~~~~v~~G~~v~L~C~~~~~~p~~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 86 (201)
T 3s97_C 15 RPEVRVKEGKGMVLLCDPPYHFPDDL--------SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVS 86 (201)
T ss_dssp CCCEEEETTCCEEECCCCCSEESSCC--------EEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEE
T ss_pred CceEEEECCCCEEEeccccccCCCce--------EEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEE
Confidence 35678999999999999 777776 5 69999986 233356789999999999999999999
Q ss_pred eCCCCcEE---EEEEEEe-------cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecC
Q psy6361 72 NAAGSTSK---TIQMNVL-------VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQ 133 (148)
Q Consensus 72 ~~~~~~~~---~~~l~v~-------~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~ 133 (148)
+..+.... ...+.+. .+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++++..+...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~ 157 (201)
T 3s97_C 87 SPSITKSVFSKFIPLIPIPERTTKPYPADIVVQ-FKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPST 157 (201)
T ss_dssp EGGGTEEEECCCEEEEEECCSSCCCEEEEEEEE-CCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTT
T ss_pred ecCCCcchhhcccceeeccccccCCCCCceEec-CCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCc
Confidence 87654322 2333332 24556555 55778899999999999999999999999999877643
No 50
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.79 E-value=4e-18 Score=114.04 Aligned_cols=119 Identities=18% Similarity=0.310 Sum_probs=93.3
Q ss_pred eeeEeeeccceeeeee------cccCCCCcCCCCccEEEEeeCCEE--------ecCCceEEEecCCCCCCEEEEEEEE-
Q psy6361 7 VEQAMLLDLIPMHSRY------NYTNLPQSRNPGQVIKRYLKDLLY--------VTRNGSFVINNIAEKDTNVYTCTVS- 71 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~------~~~~~p~~~~~~~~~v~W~~~~~~--------~~~~~~l~i~~~~~~d~g~y~C~~~- 71 (148)
...+..|+.+.|.|.+ .+.|.| .+.|+|++.. ......|.|.++..+|+|.|+|.+.
T Consensus 112 ~~~~~~g~~v~l~C~~~~~~~~~g~p~~--------~i~W~k~~~~l~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~ 183 (315)
T 1itb_B 112 KQKLPVAGDGGLVCPYMEFFKNENNELP--------KLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASY 183 (315)
T ss_dssp EEEEETTSCEEEECSSCTTTCTTTTCCC--------CCEEEETTEECCCCSSSEEEETTEEEESSCCGGGCEEEEEEEEE
T ss_pred ceEEecCCCeEEEEecccccccCCCCCC--------EEEEEECCEECCCccceEeecCceEEEEeceehhCcEEEEEEEc
Confidence 3567889999999998 666766 5999999832 2345689999999999999999999
Q ss_pred eCCCCc---EEEEEEEEe-----cCCEEEeCCCce-EEEecCCcEEEEeeeecccCCeEEEEECCEEeecCC
Q psy6361 72 NAAGST---SKTIQMNVL-----VPPFFKDEQQES-VAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQS 134 (148)
Q Consensus 72 ~~~~~~---~~~~~l~v~-----~~p~~~~~~~~~-~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~ 134 (148)
+..+.. ...+.+.+. .+|.+... +.. ..+.+|+.+.|.|.+.|.|.|.+.|++||..+....
T Consensus 184 n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~-~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~ 254 (315)
T 1itb_B 184 TYLGKQYPITRVIEFITLEENKPTRPVIVSP-ANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDD 254 (315)
T ss_dssp EETTEEEEEEEEEEEEEECCCCCCCCEECSC-CSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTC
T ss_pred CCCCcEEEEEEEEEEEEecCCCCCCCEEecC-CCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCccc
Confidence 676653 333444333 56777655 433 467899999999999999999999999999998654
No 51
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.79 E-value=1.2e-17 Score=103.84 Aligned_cols=109 Identities=20% Similarity=0.320 Sum_probs=87.4
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEecCC------ceEEEecCCCCCCEEEEEEEEeCCCCcE
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTRN------GSFVINNIAEKDTNVYTCTVSNAAGSTS 78 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~~~------~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 78 (148)
.....+..|+.+.|.|.+.+.+.|. ..+.|+|++...... ..+.|. +.+|+|.|+|.+.+. ..
T Consensus 5 i~~~~v~~G~~v~l~C~~~~~~~p~------~~~~W~k~~~~l~~~~~~~~~~~l~i~--~~~d~G~Y~C~~~n~---~~ 73 (184)
T 3b5h_A 5 VFTTVEDLGSKILLTCSLNDSATEV------TGHRWLKGGVVLKEDALPGQKTEFKVD--SDDQWGEYSCVFLPE---PM 73 (184)
T ss_dssp EEEEEEEETTEEEEEEEEESCSSCC------CEEEEESSSEEEECTTCCCSEEEEEEC--GGGCCEEEEEEEEST---TS
T ss_pred eEEEEEecCCCEEEEEECCCCCCCc------eEEEEEeCCEEeecccccCCcEEEEEe--chhhCeEEEEEEECC---cC
Confidence 4567889999999999998876662 269999998433222 245554 589999999999983 23
Q ss_pred EEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeeccc-CCeEEEEE
Q psy6361 79 KTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVP-TPDFSWYK 125 (148)
Q Consensus 79 ~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p-~~~~~W~~ 125 (148)
....|.|..+|.+... +....+.+|+.+.|.|.+.|.| .+.+.|++
T Consensus 74 ~~~~l~V~~~P~~~~~-~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~ 120 (184)
T 3b5h_A 74 GTANIQLHGPPRVKAV-KSSEHINEGETAMLVCKSESVPPVTDWAWYK 120 (184)
T ss_dssp CEEEEEECCSCCCEES-CSEEEECTTSCEEEEEECCCSSCCCEEEEEE
T ss_pred cEEEEEEecCCceeec-CCCcEEcCCCcEEEEEEECCCCCCCeEEEEE
Confidence 5567888889998887 7777899999999999999999 79999999
No 52
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.79 E-value=1.7e-18 Score=109.09 Aligned_cols=113 Identities=15% Similarity=0.211 Sum_probs=84.7
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE----------ecCCceEEEecCCCCCCEEEEEEEEeCC-C-
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY----------VTRNGSFVINNIAEKDTNVYTCTVSNAA-G- 75 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~----------~~~~~~l~i~~~~~~d~g~y~C~~~~~~-~- 75 (148)
..+..|+.+.|.|.+.+.+. .+.|+|++.. ......|.|.+++.+|+|.|+|.+.|.. +
T Consensus 14 ~~v~~G~~v~L~C~~~~~~~---------~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~ 84 (198)
T 1ugn_A 14 SVITQGSPVTLRCQGGQETQ---------EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDTAGR 84 (198)
T ss_dssp SEEETTCCEEEEEECCTTCC---------CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETTTEE
T ss_pred CcccCCCcEEEEEEecCCCc---------EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCCCCc
Confidence 36789999999999887654 3999998722 2345789999999999999999999976 4
Q ss_pred -CcEEEEEEEEec---CCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeec
Q psy6361 76 -STSKTIQMNVLV---PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 76 -~~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~ 132 (148)
..+..+.|.|.. +|.+... + ...+.+|+.+.|.|.+.+. .+.+.|+|+|..+..
T Consensus 85 ~~~s~~~~l~V~~~~~~p~i~~~-~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~ 142 (198)
T 1ugn_A 85 SESSDPLELVVTGAYIKPTLSAQ-P-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHP 142 (198)
T ss_dssp CCCCCCEEEEEECSSCCCEEEEE-S-CSEEETTCCEEEEEECSSC-CSEEEEEEC------
T ss_pred ccCCccEEEEEcccccCCccccC-C-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCC
Confidence 335556777765 4555544 3 3578899999999999888 789999999988743
No 53
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.79 E-value=3.6e-18 Score=121.57 Aligned_cols=120 Identities=13% Similarity=0.157 Sum_probs=101.8
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE----------------ecCCceEEEecCCCCCCEEEEEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY----------------VTRNGSFVINNIAEKDTNVYTCTV 70 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~----------------~~~~~~l~i~~~~~~d~g~y~C~~ 70 (148)
...+..|+.+.|.|.+.+.+.|. .+.|++++.. ......|.|.++..+|+|.|+|.+
T Consensus 220 ~~~v~~G~~v~L~C~~~g~p~p~-------~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 292 (524)
T 2ec8_A 220 SYLLREGEEFTVTCTIKDVSSSV-------YSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYA 292 (524)
T ss_dssp EEEEETTSCEEEEEEEEESSTTC-------EEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEE
T ss_pred cceEEcCCcEEEEEEEecCCCcE-------EEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEE
Confidence 34688999999999999888874 5999998722 123468999999999999999999
Q ss_pred EeCCCCcEEEEEEEEecCCEEEeCCC---ceEEEecCCcEEEEeeeecccCCe-EEEEECCEEeecCC
Q psy6361 71 SNAAGSTSKTIQMNVLVPPFFKDEQQ---ESVAIVVNHPMNISCSHYGVPTPD-FSWYKDGSLLRIQS 134 (148)
Q Consensus 71 ~~~~~~~~~~~~l~v~~~p~~~~~~~---~~~~~~~g~~~~l~C~~~g~p~~~-~~W~~~g~~l~~~~ 134 (148)
.|..+.....+.|.|..+|.+... + ....+.+|+.+.|.|.+.|.|.|. +.|+++|..+....
T Consensus 293 ~n~~g~~~~~~~l~V~~~p~~~~~-~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~ 359 (524)
T 2ec8_A 293 NNTFGSANVTTTLEVVDKGFINIF-PMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKW 359 (524)
T ss_dssp ECSSCEEEEEEEEEEESSCEEEEE-ESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSB
T ss_pred EecCCceEEEEEEEEeccCceEee-cCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCc
Confidence 999988777889999988887765 3 367889999999999999999998 99999999887654
No 54
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.79 E-value=6.1e-19 Score=109.19 Aligned_cols=114 Identities=15% Similarity=0.234 Sum_probs=87.3
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe-cCCceEEEecCCCCCCEEEEEEEEeCCCCcEEEEEEEEe
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV-TRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVL 86 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 86 (148)
..+..|+.+.|.|.+.+.+.|. .+.|++++... .....|.|.+++.+|+|.|+|.+.+..+. ..+.|.|.
T Consensus 14 ~~v~~G~~v~L~C~~~~~~~~~-------~i~W~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~s--~~~~l~V~ 84 (176)
T 1f2q_A 14 NRIFKGENVTLTCNGNNFFEVS-------STKWFHNGSLSEETNSSLNIVNAKFEDSGEYKCQHQQVNES--EPVYLEVF 84 (176)
T ss_dssp SEEETTCCEEEECCTTCC-----------CCEEEETTEECSCCSSEEEECSCCGGGCEEEEEECTTSSCC--CCEEEEEE
T ss_pred cceecCCcEEEEEeCCCCCCcc-------eEEEEECCeECCCCceEEEEeccceecCEEEEEEcCCcccc--ccEEEEEe
Confidence 4788999999999999887764 58999998433 45689999999999999999999875543 34566666
Q ss_pred cCCEEEeCCCceEEEecCCcEEEEeee-ecccCCeEEEEECCEEeec
Q psy6361 87 VPPFFKDEQQESVAIVVNHPMNISCSH-YGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 87 ~~p~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~~~W~~~g~~l~~ 132 (148)
.++..... ....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+..
T Consensus 85 ~~~~~~~~--~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~ 129 (176)
T 1f2q_A 85 SDWLLLQA--SAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKY 129 (176)
T ss_dssp CSSEEEEE--SCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCS
T ss_pred CcceeecC--CcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEee
Confidence 55544433 34577899999999999 4667779999999998853
No 55
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.79 E-value=2.9e-18 Score=108.79 Aligned_cols=115 Identities=17% Similarity=0.127 Sum_probs=92.6
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC------EEecCCceEEEecCCCCCCEEEEEEEEeCCCCcEEEE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL------LYVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTI 81 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 81 (148)
..+..|+++.|.|.+ +.+.|. ..|.|++.+ ........|.|.+++.+|+|.|.|.+.+..+.....+
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~------~~i~W~~~~~~l~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~ 89 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRG------ASVQWRGLDTSLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTV 89 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTT------CEEEEESSTTTTCCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCC------cceEEeecccccCcEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEE
Confidence 588999999999999 776662 159999864 2234457899999999999999999999888777889
Q ss_pred EEEEecCCEEEeCCCceEEEecCCcEEEEeeeecc-cC----CeEEEEECCEEeec
Q psy6361 82 QMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGV-PT----PDFSWYKDGSLLRI 132 (148)
Q Consensus 82 ~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~----~~~~W~~~g~~l~~ 132 (148)
.|+|..+|..... ... ...+|+.+ |.|.+.+. |. +.+.|+|||..|..
T Consensus 90 ~ltV~~~P~~~~i-~~~-~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~ 142 (210)
T 1gsm_A 90 QLLVYAFPNQLTV-SPA-ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEG 142 (210)
T ss_dssp EEEEEBCCSEEEE-ESS-SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTT
T ss_pred EEEEEecCCCcEE-ccc-eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEccc
Confidence 9999988876654 222 56678888 99999875 64 48999999999854
No 56
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.79 E-value=5e-18 Score=108.31 Aligned_cols=125 Identities=16% Similarity=0.254 Sum_probs=91.5
Q ss_pred CCcceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC----------------------E-Eec------CCce
Q psy6361 2 SGTMNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL----------------------L-YVT------RNGS 52 (148)
Q Consensus 2 ~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~----------------------~-~~~------~~~~ 52 (148)
.+......+..|+.+.|.|.+.+.+.+. .....+.|+|++ + ... ....
T Consensus 5 ~~p~~~v~~~~G~~v~L~C~~~~~p~~~---~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 81 (222)
T 3sbw_C 5 TVPKDLYVVEYGSNMTIECKFPVEKQLD---LAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAA 81 (222)
T ss_dssp BCSCSEEEEETTSCEEEEEECCCCSSCC---TTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEE
T ss_pred ecCCccEEEEcCCcEEEEeEecCCCCCC---CccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEE
Confidence 3455667899999999999987766431 112379999963 0 000 1237
Q ss_pred EEEecCCCCCCEEEEEEEEeCCCCcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEEC-CEEee
Q psy6361 53 FVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKD-GSLLR 131 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~-g~~l~ 131 (148)
|.|.+++.+|+|.|+|.+.+ .+.....+.|.|..+|..... .......+|+.+.|.|.+.|.|.|.+.|+++ |..+.
T Consensus 82 L~I~~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~~-~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~ 159 (222)
T 3sbw_C 82 LQITDVKLQDAGVYRCMISY-GGADYKRITVKVNAPYNKINQ-RILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLS 159 (222)
T ss_dssp EEESSCCGGGCEEEEEEEES-SSEEEEEEEEEEEBCCCCCEE-EEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEEC
T ss_pred EEEcCcccccCeEEEEEEEe-CCCceeEEEEEEECCCCCCCc-eeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceec
Confidence 99999999999999999998 555666777888765544332 2223567889999999999999999999998 66554
No 57
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.79 E-value=1.2e-18 Score=109.91 Aligned_cols=124 Identities=14% Similarity=0.213 Sum_probs=90.0
Q ss_pred CcceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEee-CC---------EEec-----CCceEEEecCCCCCCEEEE
Q psy6361 3 GTMNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLK-DL---------LYVT-----RNGSFVINNIAEKDTNVYT 67 (148)
Q Consensus 3 ~~~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~-~~---------~~~~-----~~~~l~i~~~~~~d~g~y~ 67 (148)
+......+..|+.+.|.|.+.+.+... .....+.|+| ++ .... ....|.|.+++.+|+|.|+
T Consensus 7 ~p~~~v~v~~G~~v~L~C~~~~~p~~~---~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 83 (202)
T 3bp6_B 7 APKEVYTVDVGSSVSLECDFDRRECTE---LEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYR 83 (202)
T ss_dssp CSCSEEEEETTSCEEEEEEECTTC------CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEE
T ss_pred cCCcCEEEeCCCcEEEEEEecCCCCCC---ccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEE
Confidence 445567899999999999998876500 0011699999 32 1111 2368999999999999999
Q ss_pred EEEEeCCCCcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEee
Q psy6361 68 CTVSNAAGSTSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLR 131 (148)
Q Consensus 68 C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~ 131 (148)
|.+.+..+.....+.|.|..++..... ......+|+.+.|.|.+.|.|.|.+.|++++..+.
T Consensus 84 C~~~~~~~~~~~~~~l~V~~~~~~p~~--~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~ 145 (202)
T 3bp6_B 84 CLVICGAAWDYKYLTVKVKASYMRIDT--RILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPAN 145 (202)
T ss_dssp EEEEETTEEEEEEEEEEEEBCCCCEEE--EEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCE
T ss_pred EEEEeCCCcceEEEEEEecCCCCcccE--EEEecCCCCeEEEEEEccccCCceEEEEeCCCCcc
Confidence 999998877677778888755422211 01134578999999999999999999999887653
No 58
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.79 E-value=2.3e-18 Score=109.03 Aligned_cols=120 Identities=18% Similarity=0.234 Sum_probs=92.8
Q ss_pred CcceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEee----------------CCEEec------------------
Q psy6361 3 GTMNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLK----------------DLLYVT------------------ 48 (148)
Q Consensus 3 ~~~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~----------------~~~~~~------------------ 48 (148)
.......+..|+.+.|.|.+.+.+... ..+.+.|++ ++....
T Consensus 5 ~~~~~v~v~~G~~v~L~C~~~~~~~~~----~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 80 (214)
T 3jz7_A 5 TPEQRIEKAKGETAYLPCKFTLSPEDQ----GPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVK 80 (214)
T ss_dssp -CEEEEEEETTSCEEECCBCCCCTTCC----SCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGG
T ss_pred cCCceEEEecCCCEEEEEEEecCCCCC----CcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCcc
Confidence 345667899999999999998876320 012699988 221111
Q ss_pred -CCceEEEecCCCCCCEEEEEEEEeCCCCcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeee-ecccCCeEEEEEC
Q psy6361 49 -RNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSH-YGVPTPDFSWYKD 126 (148)
Q Consensus 49 -~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~~~W~~~ 126 (148)
....|.|.+++.+|+|.|+|.+.+..+.....+.|.|..+|.+... +....+.+|+.+.|.|.+ .+.|.|.+.|+++
T Consensus 81 ~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~-~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~ 159 (214)
T 3jz7_A 81 SGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRC-FVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKL 159 (214)
T ss_dssp GTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEE-EEESCCBTTCCEEEEEECSBCCSSCEEEEEEC
T ss_pred CCcccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCcee-eeecceecCCcEEEEecCCCCCCCCEEEEEEC
Confidence 2467999999999999999999998887778888999888776554 444457789999999999 8999999999994
Q ss_pred C
Q psy6361 127 G 127 (148)
Q Consensus 127 g 127 (148)
+
T Consensus 160 ~ 160 (214)
T 3jz7_A 160 S 160 (214)
T ss_dssp S
T ss_pred C
Confidence 3
No 59
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.78 E-value=2.1e-17 Score=104.48 Aligned_cols=119 Identities=18% Similarity=0.281 Sum_probs=91.8
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC---------------------------EEecCCceEEEecCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL---------------------------LYVTRNGSFVINNIA 59 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~---------------------------~~~~~~~~l~i~~~~ 59 (148)
...+..|+.+.|.|...+.+.+ .+.|++++ .....+..|.|.+++
T Consensus 8 ~~~v~~G~~v~L~C~~~~~~~~--------~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~ 79 (208)
T 3r4d_A 8 PPQVAEDNNVLLLVHNLPLALG--------AFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMIT 79 (208)
T ss_dssp SSEEETTCCEEEEEECCCSSCS--------EEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCC
T ss_pred cceeecCCcEEEEEeCCCCCce--------EEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEcccc
Confidence 4578899999999997766665 69999973 111223579999999
Q ss_pred CCCCEEEEEEEEeCC-CCcEEEEEEEEecC---CEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCc
Q psy6361 60 EKDTNVYTCTVSNAA-GSTSKTIQMNVLVP---PFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSH 135 (148)
Q Consensus 60 ~~d~g~y~C~~~~~~-~~~~~~~~l~v~~~---p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~ 135 (148)
.+|+|.|+|.+.+.. +.....+.|.|..+ |.+... +.. +.+|+.+.|.|.+.+.| |.+.|+++|..+....+
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~-~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~ 155 (208)
T 3r4d_A 80 MKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVT-NTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTER 155 (208)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEES-CSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSS
T ss_pred ccCCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecC-Cce--EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCC
Confidence 999999999999875 44566677777644 555544 333 88899999999998876 79999999999886655
Q ss_pred eE
Q psy6361 136 YI 137 (148)
Q Consensus 136 ~~ 137 (148)
+.
T Consensus 156 ~~ 157 (208)
T 3r4d_A 156 MT 157 (208)
T ss_dssp EE
T ss_pred eE
Confidence 44
No 60
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.78 E-value=6.2e-18 Score=114.07 Aligned_cols=111 Identities=14% Similarity=0.222 Sum_probs=88.5
Q ss_pred EeeeccceeeeeecccC-CCCcCCCCccEEEEeeCCEEe--------cCCceEEEecCCCCCCEEEEEEEEeC--CCCc-
Q psy6361 10 AMLLDLIPMHSRYNYTN-LPQSRNPGQVIKRYLKDLLYV--------TRNGSFVINNIAEKDTNVYTCTVSNA--AGST- 77 (148)
Q Consensus 10 ~~~g~~~~l~C~~~~~~-~p~~~~~~~~~v~W~~~~~~~--------~~~~~l~i~~~~~~d~g~y~C~~~~~--~~~~- 77 (148)
+..|+.+.|.|.+.+.| .| .+.|+|++... ..+..|.|.++..+|+|.|+|.+.|. .+..
T Consensus 140 ~~~G~~v~L~C~~~g~p~~~--------~i~W~k~~~~l~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~ 211 (329)
T 3oq3_B 140 THDKYGIDLYCGILYAKHYN--------NITWYKNNQELIIDGTKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKND 211 (329)
T ss_dssp SSTTTCEEEECCCCSCCCCC--------EEEEEETTEECCCSSSSEEEETTEEEECSCCGGGCEEEEEEEEECCTTSSSC
T ss_pred EeCCCcEEEEeccCCCCCCc--------eEEEEECCccCCCCCceEecCCCEEEEeecChhhCEEEEEEEEecccCCCce
Confidence 45588999999999988 66 69999997322 22578999999999999999999987 5442
Q ss_pred ---EEEEEEEEecCC----EEEeCCCceEEEecCCcEEEEeeeeccc---CC-eEEEEECCEEe
Q psy6361 78 ---SKTIQMNVLVPP----FFKDEQQESVAIVVNHPMNISCSHYGVP---TP-DFSWYKDGSLL 130 (148)
Q Consensus 78 ---~~~~~l~v~~~p----~~~~~~~~~~~~~~g~~~~l~C~~~g~p---~~-~~~W~~~g~~l 130 (148)
+..+.|.|..+| ... . +....+.+|+.+.|.|.+.|.| .+ .+.|+++|..+
T Consensus 212 ~~~s~~~~l~V~~~~~~~~~~~-~-~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i 273 (329)
T 3oq3_B 212 IVVSRCKILTVIPSQDHRFKLI-L-DPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWI 273 (329)
T ss_dssp EEEEEEEEEEEECCCCCCEEEE-C-CSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCB
T ss_pred eEEEeeEEEEEECCCCCCCcee-c-CCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeee
Confidence 233667777655 333 4 6678899999999999999987 77 88999999874
No 61
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.78 E-value=6.6e-18 Score=106.93 Aligned_cols=120 Identities=23% Similarity=0.367 Sum_probs=91.5
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe-------------cCCceEEE-----ecCCCCCCEEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV-------------TRNGSFVI-----NNIAEKDTNVYT 67 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~-------------~~~~~l~i-----~~~~~~d~g~y~ 67 (148)
....+..|+.+.|.|.+.+.+.+ .+.|++++... .....+.+ .++..+|+|.|+
T Consensus 17 ~~~~v~~G~~v~l~C~~~~~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 88 (212)
T 2v9r_A 17 SDLIVSKGEPATLNCKAEGRPTP--------TIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYV 88 (212)
T ss_dssp CCEEECTTCCEEECCEEEEESCC--------EEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEE
T ss_pred CceEEeCCCcEEEEEEcCCCCCC--------EEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEE
Confidence 34678889999999999887777 69999987222 22333333 456899999999
Q ss_pred EEEEeCCCCc-EEEEEEEEec-CCEEEeCCCceEEEecCCcEEEEeee-ecccCCeEEEEECCEEeecCC
Q psy6361 68 CTVSNAAGST-SKTIQMNVLV-PPFFKDEQQESVAIVVNHPMNISCSH-YGVPTPDFSWYKDGSLLRIQS 134 (148)
Q Consensus 68 C~~~~~~~~~-~~~~~l~v~~-~p~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~~~W~~~g~~l~~~~ 134 (148)
|.+.+..+.. +....|.|.. ++.+... +....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+....
T Consensus 89 C~~~n~~g~~~~~~~~l~V~~~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~ 157 (212)
T 2v9r_A 89 CVARNYLGEAVSHDASLEVAILRDDFRQN-PSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKD 157 (212)
T ss_dssp EEEEETTEEEECCCEEEEECEECSSCSBC-CCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTS
T ss_pred EEEECCCCceeecceEEEEEeccccceeC-CCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCc
Confidence 9999987653 4456677664 3444444 667788999999999998 899999999999999987543
No 62
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.78 E-value=6.3e-18 Score=108.40 Aligned_cols=120 Identities=18% Similarity=0.381 Sum_probs=95.0
Q ss_pred eeeeEeeeccceeeeeecccCC-CCcCCCCccEEEEeeCC---E-----------------E-----------ecCCceE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNL-PQSRNPGQVIKRYLKDL---L-----------------Y-----------VTRNGSF 53 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~-p~~~~~~~~~v~W~~~~---~-----------------~-----------~~~~~~l 53 (148)
....+..|+.+.|.|.+.+.+. + .+.|++++ . . ......|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L 79 (231)
T 2pet_A 8 PLVEVMRGKSVILDCTPTGTHDHY--------MLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRL 79 (231)
T ss_dssp SEEEEETTCCEEECCCCBSCCSEE--------EEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCE
T ss_pred CcEEEEcCCCEEEecccCCCCCce--------EEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceE
Confidence 4578899999999999998875 5 69999743 1 1 2333569
Q ss_pred EEecCCCCCCEEEEEEEEeCC-CCcEEEEEEEEecCC---EEEeCCCceEEEecCCcE-EEEeee-ecccCCeEEEEECC
Q psy6361 54 VINNIAEKDTNVYTCTVSNAA-GSTSKTIQMNVLVPP---FFKDEQQESVAIVVNHPM-NISCSH-YGVPTPDFSWYKDG 127 (148)
Q Consensus 54 ~i~~~~~~d~g~y~C~~~~~~-~~~~~~~~l~v~~~p---~~~~~~~~~~~~~~g~~~-~l~C~~-~g~p~~~~~W~~~g 127 (148)
.|.+++.+|+|.|+|.+.+.. +.....+.|.|..+| .+... +....+.+|+.+ .|.|.+ .+.|.|.+.|+++|
T Consensus 80 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~-~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~ 158 (231)
T 2pet_A 80 VLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPN-KGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNG 158 (231)
T ss_dssp EESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEEC-CSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETT
T ss_pred EEcccCcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecC-CcceeecCCCceEEEEEEeECcccCCEEEEEECC
Confidence 999999999999999999886 557777888888654 44444 444556688877 999999 89999999999999
Q ss_pred EEeecCC
Q psy6361 128 SLLRIQS 134 (148)
Q Consensus 128 ~~l~~~~ 134 (148)
..+....
T Consensus 159 ~~~~~~~ 165 (231)
T 2pet_A 159 QRLEVPV 165 (231)
T ss_dssp EECCCCS
T ss_pred ccCcccc
Confidence 9987655
No 63
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.78 E-value=4.7e-18 Score=106.86 Aligned_cols=112 Identities=12% Similarity=0.161 Sum_probs=86.6
Q ss_pred eEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE------e----cCCceEEEecCCCCCCEEEEEEEEeCCC--C
Q psy6361 9 QAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY------V----TRNGSFVINNIAEKDTNVYTCTVSNAAG--S 76 (148)
Q Consensus 9 ~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~------~----~~~~~l~i~~~~~~d~g~y~C~~~~~~~--~ 76 (148)
.+..|+.+.|.|.+.+ +.+ .+.|+|++.. . .....|.|.+++.+|+|.|+|.+.|..+ .
T Consensus 15 ~v~~G~~v~L~C~~~~-~~~--------~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 85 (196)
T 3p2t_A 15 VISWGNSVTIWCQGTL-EAR--------EYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQ 85 (196)
T ss_dssp EEETTCCEEEEEECCT-TCC--------EEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBC
T ss_pred cCCCCCcEEEEeeCCC-CCC--------EEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCCcccC
Confidence 6788999999999888 444 6999998711 1 2346899999999999999999999876 2
Q ss_pred cEEEEEEEEe---cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeec
Q psy6361 77 TSKTIQMNVL---VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 77 ~~~~~~l~v~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~ 132 (148)
.+..+.|.|. .+|.+... +. ..+.+|+.+.|.|.+.+. .+.+.|+|+|..+..
T Consensus 86 ~s~~~~l~V~~~~~~p~~~~~-~~-~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~ 141 (196)
T 3p2t_A 86 PSDPLELVMTGAYSKPTLSAL-PS-PLVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPL 141 (196)
T ss_dssp CCCCEEEEEECSSCCCEEEEE-SC-SEECTTCCEEEEEEEEEE-EEEEEEEETTCCCGG
T ss_pred CCccEEEEecCCCCCCEEEeC-Cc-ceecCCCeEEEEEecCCC-CCEEEEEeCCCcccc
Confidence 4555667775 35566554 33 367899999999998874 458999999987754
No 64
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.77 E-value=6.5e-18 Score=111.65 Aligned_cols=119 Identities=18% Similarity=0.187 Sum_probs=95.0
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeC-C--------EEecCCceEEEecCCCCCCEEEEEEEEe-CCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKD-L--------LYVTRNGSFVINNIAEKDTNVYTCTVSN-AAG 75 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~-~--------~~~~~~~~l~i~~~~~~d~g~y~C~~~~-~~~ 75 (148)
....+..|+.+.|.|.+.+.+.+. .+.|++. + ........|.|.++..+|+|.|+|.+.+ ..+
T Consensus 97 ~~~~v~~g~~v~L~C~~~~~~~~~-------~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~ 169 (289)
T 3ejj_X 97 QEVTVVEGQEAVLPCLITDPALKD-------SVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRE 169 (289)
T ss_dssp SEEEEETTSCEEECEEESCGGGGG-------SEEEEEGGGEECCTTCCEEEETTTEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred ceEEEecCCceEeEEEccCCCcce-------EEEEEecCCeecCCCccEEECCCCCEEEeecccccCEEEEEEEEeCCCc
Confidence 346678899999999999877663 4999874 3 2234456899999999999999999984 334
Q ss_pred CcEEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEeeeec-ccCCeEEEEECCEEeec
Q psy6361 76 STSKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCSHYG-VPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 76 ~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~~~~W~~~g~~l~~ 132 (148)
..+..+.|.|. .+|.+... +....+.+|+.+.|.|.+.+ .|.+.+.|+++|..+..
T Consensus 170 ~~~~~~~l~V~~~~~~~p~i~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~ 230 (289)
T 3ejj_X 170 STSTGIWLKVNRVHPEPPQIKLE-PSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEI 230 (289)
T ss_dssp EECCCEEEEEESSCCCCCEEEEE-SSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCC
T ss_pred cccccEEEEEEECCCCCCeEEec-CCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeec
Confidence 45566778887 57778777 66777789999999999988 78999999999998865
No 65
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.77 E-value=2.9e-18 Score=109.97 Aligned_cols=119 Identities=15% Similarity=0.238 Sum_probs=85.7
Q ss_pred CcceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----------EEe--------------------cCCc
Q psy6361 3 GTMNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----------LYV--------------------TRNG 51 (148)
Q Consensus 3 ~~~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----------~~~--------------------~~~~ 51 (148)
|+.....|..|+++.|.|.+.+.+.+. .+.+.|+|++ ... ....
T Consensus 9 ~P~~pV~v~~G~~v~L~C~v~~~~~~~-----~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~ 83 (226)
T 4f80_A 9 GPSGPILAMVGEDADLPCHLFPTMSAE-----TMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKA 83 (226)
T ss_dssp CCSSCEEEETTSCEEEEEEEESCCCCT-----TSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEE
T ss_pred CCCCCEEEEcCCcEEEEEEEECCCCCC-----ceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeE
Confidence 455567889999999999997655432 2368899875 000 1134
Q ss_pred eEEEecCCCCCCEEEEEEEEeCCCCcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeec-ccCCeEEEEECCEE
Q psy6361 52 SFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYG-VPTPDFSWYKDGSL 129 (148)
Q Consensus 52 ~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~~~~W~~~g~~ 129 (148)
.|.|.+++.+|+|.|+|.+.|..+.....+.+.+. +..... .....+.+|..+.+.|.+.| .|.|.+.|++++..
T Consensus 84 ~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~--~~~~~~-~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~ 159 (226)
T 4f80_A 84 ALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVA--ALGSDL-HVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGE 159 (226)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE--BCCCCC-EEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSC
T ss_pred EEEEeeCchHHCeeEEEEEECCCcEEEEEEEEeec--cceecc-cceeeeccCCceeeEEEeccCCCCCEEEEEECCce
Confidence 79999999999999999999987765544443333 333333 44567788999999999877 59999999986543
No 66
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.77 E-value=9e-19 Score=109.53 Aligned_cols=112 Identities=13% Similarity=0.208 Sum_probs=80.6
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec--CCceEEEec-CCCCCCEEEEEEEEeCCCCcEEEEEEE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT--RNGSFVINN-IAEKDTNVYTCTVSNAAGSTSKTIQMN 84 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~--~~~~l~i~~-~~~~d~g~y~C~~~~~~~~~~~~~~l~ 84 (148)
..+..|+.+.|.|.+.+ +. .+.|+|++.... .+..|.|.+ +..+|+|.|+|.+.|..+..+....+.
T Consensus 9 ~v~~~G~~v~L~C~~~~-~~---------~i~W~k~g~~l~~~~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~ 78 (186)
T 1jbj_A 9 KVSISGTSVELTCPLDS-DE---------NLKWEKNGQELPQKHDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKAR 78 (186)
T ss_dssp EEEEETTEEEEECSSCC-CT---------TCEEEETTEEECSCCCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCC
T ss_pred EEEeCCcEEEEEEeCCC-CC---------ceEEEECCEECCCCCCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEE
Confidence 44578999999999876 32 389999985443 467899999 999999999999999887644444444
Q ss_pred Eec--CCEE----------------E---eCCCceE---EEecCCcEEEEeeeecccCCeEEEEECCEEeec
Q psy6361 85 VLV--PPFF----------------K---DEQQESV---AIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 85 v~~--~p~~----------------~---~~~~~~~---~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~ 132 (148)
+.. ++.. . ....... .+.+|+.+.|.|.+ |.|.+.|+|||..+..
T Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~ 147 (186)
T 1jbj_A 79 VGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISP 147 (186)
T ss_dssp CCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCC
T ss_pred EecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcc
Confidence 331 1110 0 0000111 23389999999998 7889999999999864
No 67
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.76 E-value=6.2e-18 Score=117.89 Aligned_cols=114 Identities=11% Similarity=0.084 Sum_probs=83.6
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec-------C---CceEEEecCCCCCCEEEEEEEEeCCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT-------R---NGSFVINNIAEKDTNVYTCTVSNAAGS 76 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~-------~---~~~l~i~~~~~~d~g~y~C~~~~~~~~ 76 (148)
...+..|+.+.|.|.+.+.|.| .+.|++++.... . ...|.|.+++.+|+|.|+|.+.|..+.
T Consensus 57 ~v~V~~G~~v~L~C~v~g~P~p--------~i~W~~~~~~l~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~ 128 (423)
T 3qs7_E 57 AVEVDVSASITLQVLVDAPGNI--------SCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATN 128 (423)
T ss_dssp EEEECSSCCEEEEEECSCCSSC--------EEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CE
T ss_pred cEEEecCCcEEEEEEEEcCCCC--------eEEEEECCCccCccceeccccceEEEEEEeecCcccCEEEEEEEEcCCCc
Confidence 6789999999999999997777 699999872211 1 136899999999999999999999888
Q ss_pred cEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEe
Q psy6361 77 TSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLL 130 (148)
Q Consensus 77 ~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l 130 (148)
....+.|.|..+|.+... .+.....|+.+.|.|.+.|.|.|.++|++++..+
T Consensus 129 ~~~~~~l~V~~~p~~~~~--~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~ 180 (423)
T 3qs7_E 129 YTILFTVSIRNTLLYTLR--RPYFRKMENQDALVCISESVPEPIVEWVLCDSQG 180 (423)
T ss_dssp EEEEEEEEEC-----CEE--EEEEEECSSSSCEEEEEEESSCCEEEEEEC----
T ss_pred EEEEEEEEEecCcccccc--CCcEeccCCceEEEEEEeeecCCeEEEEECCCCC
Confidence 777778888766655322 2234556788899999999999999999988755
No 68
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.76 E-value=4.4e-18 Score=106.11 Aligned_cols=112 Identities=13% Similarity=0.161 Sum_probs=87.3
Q ss_pred eEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE-EecCCceEEEecCCCCCCEEEEEEEEeCCCC--cEEEEEEEE
Q psy6361 9 QAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL-YVTRNGSFVINNIAEKDTNVYTCTVSNAAGS--TSKTIQMNV 85 (148)
Q Consensus 9 ~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~--~~~~~~l~v 85 (148)
.+..|+.+.|.|.+.+ +.+ .+.|+|++. .......|.|.+++.+|+|.|+|.+.|..+. .+..+.|.|
T Consensus 18 ~v~~G~~v~L~C~~~~-~~~--------~~~W~k~g~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V 88 (184)
T 2gi7_A 18 LVPLEKPVTLRCQGPP-GVD--------LYRLEKLSSSRYQDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVA 88 (184)
T ss_dssp EEETTCCEEEEEECST-TCS--------EEEEEETTTCCEESSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEE
T ss_pred cccCCCcEEEEEeCCC-CCC--------EEEEEECCccccCcccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEEEe
Confidence 6789999999999877 444 699999973 3455678999999999999999999997642 344566676
Q ss_pred e---cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeec
Q psy6361 86 L---VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 86 ~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~ 132 (148)
. .+|.+... + ...+.+|+.+.|.|.+.+.+ +.+.|+|+|..+..
T Consensus 89 ~~~~~~p~i~~~-p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~ 135 (184)
T 2gi7_A 89 TGVFAKPSLSAQ-P-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPY 135 (184)
T ss_dssp ESSSCCCEEEEE-C-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTS
T ss_pred cCcCCCCEEEeC-C-CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcc
Confidence 4 35666554 4 34567899999999987654 69999999987754
No 69
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.76 E-value=8.6e-18 Score=107.02 Aligned_cols=117 Identities=15% Similarity=0.216 Sum_probs=86.9
Q ss_pred eeeEeeeccceeeeeeccc-CCCCcCCCCccEEEEeeCC--------EE---------------------ecCCceEEEe
Q psy6361 7 VEQAMLLDLIPMHSRYNYT-NLPQSRNPGQVIKRYLKDL--------LY---------------------VTRNGSFVIN 56 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~-~~p~~~~~~~~~v~W~~~~--------~~---------------------~~~~~~l~i~ 56 (148)
...+..|+.+.|.|.+.+. +.+ .+.|+|.. .. ......|.|.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 80 (218)
T 3s96_B 9 SASFSLGASAKLTCTLNSQHSTY--------TIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSIS 80 (218)
T ss_dssp EEEEETTSCEEEEEEECGGGTTC--------CEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEES
T ss_pred cEEECCCCcEEEEEECCCCCCCc--------EEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEc
Confidence 5778999999999999998 666 59999931 00 1123459999
Q ss_pred cCCCCCCEEEEEEEEeCCC-----CcEEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEeeeec-ccCC-eEEEEE
Q psy6361 57 NIAEKDTNVYTCTVSNAAG-----STSKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCSHYG-VPTP-DFSWYK 125 (148)
Q Consensus 57 ~~~~~d~g~y~C~~~~~~~-----~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~-~~~W~~ 125 (148)
+++.+|+|.|.|.+.+..+ .......|.|. .+|.+... +.......|+.+.|.|.+.+ .|.+ .+.|++
T Consensus 81 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~-~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k 159 (218)
T 3s96_B 81 NIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVF-PPSSEELKENKATLVCLISNFSPSGVTVAWKA 159 (218)
T ss_dssp SCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEE-CCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEE
T ss_pred cCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEee-CCCcccccCCcEEEEEEECcccCCCeEEEEEE
Confidence 9999999999999988765 23334567776 45666654 33344456788999999988 5666 899999
Q ss_pred CCEEeec
Q psy6361 126 DGSLLRI 132 (148)
Q Consensus 126 ~g~~l~~ 132 (148)
||..+..
T Consensus 160 ~g~~l~~ 166 (218)
T 3s96_B 160 NGTPITQ 166 (218)
T ss_dssp TTEEC--
T ss_pred CCEECcC
Confidence 9998865
No 70
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.76 E-value=1.2e-17 Score=111.64 Aligned_cols=120 Identities=17% Similarity=0.215 Sum_probs=90.5
Q ss_pred Eeeeccceeeeeecc----------cCCCCcCCCCccEEEEeeCCEE-----------ecCCceEEEecCCCCCCEEEEE
Q psy6361 10 AMLLDLIPMHSRYNY----------TNLPQSRNPGQVIKRYLKDLLY-----------VTRNGSFVINNIAEKDTNVYTC 68 (148)
Q Consensus 10 ~~~g~~~~l~C~~~~----------~~~p~~~~~~~~~v~W~~~~~~-----------~~~~~~l~i~~~~~~d~g~y~C 68 (148)
+..|+.+.|.|...+ .+.| .+.|++++.. ......|.|.++..+|+|.|+|
T Consensus 110 ~~~g~~~~l~c~~~~~~l~c~~~~~~p~~--------~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 181 (317)
T 2y25_A 110 ALSATDLKIQSTAEGIQLYSFVTYYVEDL--------KVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVM 181 (317)
T ss_dssp HTCBCCCEEEECSSEEEEEEEBSSCCSSC--------EEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEE
T ss_pred cccCCCeEEEeeccccEEEEEeccCCCCc--------EEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEE
Confidence 346777888888776 4555 7999998711 1112349999999999999999
Q ss_pred EEEeCCCCcEEEEEEEEe--------------------cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCE
Q psy6361 69 TVSNAAGSTSKTIQMNVL--------------------VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGS 128 (148)
Q Consensus 69 ~~~~~~~~~~~~~~l~v~--------------------~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~ 128 (148)
.+.|..+.......+.+. ..|.+....+....+.+|+.+.|.|.+.|.|.|.+.|+++|.
T Consensus 182 ~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~ 261 (317)
T 2y25_A 182 ELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEK 261 (317)
T ss_dssp EEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSS
T ss_pred EEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCE
Confidence 999988776666665542 134455442556788999999999999999999999999999
Q ss_pred EeecCCceE
Q psy6361 129 LLRIQSHYI 137 (148)
Q Consensus 129 ~l~~~~~~~ 137 (148)
.+....++.
T Consensus 262 ~~~~~~~~~ 270 (317)
T 2y25_A 262 ALASDDHCN 270 (317)
T ss_dssp EECCCSSEE
T ss_pred eCCCCCcEE
Confidence 987665543
No 71
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.76 E-value=1.1e-17 Score=106.27 Aligned_cols=119 Identities=13% Similarity=0.124 Sum_probs=88.3
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC--E-----------------------EecCCceEEEecCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL--L-----------------------YVTRNGSFVINNIAE 60 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~--~-----------------------~~~~~~~l~i~~~~~ 60 (148)
....+..|+.+.|.|.+.+.+.| .+.|+|++ . .......|.|.+++.
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 80 (213)
T 3d9a_L 9 ATLSVTPGNSVSLSCRASQSIGN--------NLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVET 80 (213)
T ss_dssp SEEEECTTCCEEEEEEESSCCTT--------CEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCG
T ss_pred ccEEEeCCCcEEEEEECCCCCCC--------CEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCCh
Confidence 35678999999999999988776 59999842 0 001223799999999
Q ss_pred CCCEEEEEEEEeCCCC-cEEEEEEEEec---CCEEEeCCCceEEEecCCcEEEEeeeec-ccCC-eEEEEECCEEeecC
Q psy6361 61 KDTNVYTCTVSNAAGS-TSKTIQMNVLV---PPFFKDEQQESVAIVVNHPMNISCSHYG-VPTP-DFSWYKDGSLLRIQ 133 (148)
Q Consensus 61 ~d~g~y~C~~~~~~~~-~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~-~~~W~~~g~~l~~~ 133 (148)
+|+|.|+|.+.+..+. ......|.|.. +|.+... +......+|+.+.|.|.+.| .|.+ .+.|++||..+...
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~-~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~ 158 (213)
T 3d9a_L 81 EDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIF-PPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNG 158 (213)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEE-CCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTT
T ss_pred hhCEEEEEeeecCCcceeCCCEEEEEecCCCCceeEeE-CCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcce
Confidence 9999999999987664 22234666663 6776654 33333447889999999987 5665 89999999988654
No 72
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.76 E-value=1.4e-17 Score=112.99 Aligned_cols=140 Identities=13% Similarity=0.101 Sum_probs=99.5
Q ss_pred ceeeeEeeeccceeeeeecccCCCC----cCCCCccEEEEeeCCE----------------EecCCceEEEecCCCCCCE
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQ----SRNPGQVIKRYLKDLL----------------YVTRNGSFVINNIAEKDTN 64 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~----~~~~~~~~v~W~~~~~----------------~~~~~~~l~i~~~~~~d~g 64 (148)
.....+..|+.+.|.|.+.+.+... ..+ ....+.|+|++. .......|.|.++..+|+|
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~-~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G 92 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHS-AGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTG 92 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHH-TTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCE
T ss_pred eeeEEEecCCeEEEEccccccccccccccccC-CCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCE
Confidence 4467799999999999998765300 000 001799999861 1123568999999999999
Q ss_pred EEEEEEEeCCCCcEEEEEEEEecCCEEEeCC---CceEEEecCCcEEEEeee-----ecccCCeEEEEECCEEeecCCce
Q psy6361 65 VYTCTVSNAAGSTSKTIQMNVLVPPFFKDEQ---QESVAIVVNHPMNISCSH-----YGVPTPDFSWYKDGSLLRIQSHY 136 (148)
Q Consensus 65 ~y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~---~~~~~~~~g~~~~l~C~~-----~g~p~~~~~W~~~g~~l~~~~~~ 136 (148)
.|+|.+.|..+.....+.|.|..+|...... +....+.+|+.+.|.|.+ .|.|.+.+.|+|||..+....++
T Consensus 93 ~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~ 172 (349)
T 4dep_C 93 NYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNV 172 (349)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSE
T ss_pred EEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccce
Confidence 9999999988777777888887655322110 335567789999999984 77899999999999998664433
Q ss_pred EEE--EEEEEe
Q psy6361 137 ITF--FLFFQR 145 (148)
Q Consensus 137 ~~~--~l~~~~ 145 (148)
... .|.|..
T Consensus 173 ~~~~~~L~i~~ 183 (349)
T 4dep_C 173 IPEGMNLSFLI 183 (349)
T ss_dssp EEETTEEEEES
T ss_pred eecCCEEEEee
Confidence 322 355544
No 73
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.76 E-value=1.1e-17 Score=108.50 Aligned_cols=121 Identities=15% Similarity=0.266 Sum_probs=92.6
Q ss_pred cceeeeEeeeccceeeeeecc---cCCCCcCCCCccEEEEeeCCEE------ec--------------------------
Q psy6361 4 TMNVEQAMLLDLIPMHSRYNY---TNLPQSRNPGQVIKRYLKDLLY------VT-------------------------- 48 (148)
Q Consensus 4 ~~~~~~~~~g~~~~l~C~~~~---~~~p~~~~~~~~~v~W~~~~~~------~~-------------------------- 48 (148)
......+..|+.+.|.|.+.+ .+.| .+.|++++.. ..
T Consensus 8 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (250)
T 2fbo_J 8 THTEVEVHAGGTVELPCSYQLANDTQPP--------VISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFL 79 (250)
T ss_dssp SCSEEEECTTSCEEECCEEEECSCCSCC--------EEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGT
T ss_pred CCCceEEecCCeEEEEEEeEcCCCCCce--------EEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcC
Confidence 445678899999999999987 4444 6999997511 00
Q ss_pred --------CCceEEEecCCCCCCEEEEEEEEeCCCCc-----EEEEEEEEecC---CEEEeCCCceEEEecCCcEEEEee
Q psy6361 49 --------RNGSFVINNIAEKDTNVYTCTVSNAAGST-----SKTIQMNVLVP---PFFKDEQQESVAIVVNHPMNISCS 112 (148)
Q Consensus 49 --------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~-----~~~~~l~v~~~---p~~~~~~~~~~~~~~g~~~~l~C~ 112 (148)
....|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|..+ |.+....+....+.+|+.+.|.|.
T Consensus 80 ~r~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~ 159 (250)
T 2fbo_J 80 GRASVANLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCP 159 (250)
T ss_dssp TTEECSCTTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCC
T ss_pred ceEEeccCCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEE
Confidence 12489999999999999999999877642 45677887753 344333144566778999999999
Q ss_pred eecccCCeEEEEECCEEeec
Q psy6361 113 HYGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 113 ~~g~p~~~~~W~~~g~~l~~ 132 (148)
+.+.|.|.+.|++++..+..
T Consensus 160 ~~g~p~p~v~W~k~~~~~~~ 179 (250)
T 2fbo_J 160 CTDCANANVTWYTGPTFFEN 179 (250)
T ss_dssp EESCTTCEEEEEEEEECSSC
T ss_pred ecCCCCCeeEEEeCCCcccc
Confidence 99999999999999987754
No 74
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.76 E-value=5.5e-17 Score=111.71 Aligned_cols=120 Identities=21% Similarity=0.448 Sum_probs=96.1
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----------EEecCCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----------LYVTRNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
....+..|+.+.|.|.+.+.+.| .+.|++++ ........|.|.++..+|+|.|+|.+.|..
T Consensus 129 ~~~~~~~G~~v~l~C~~~~~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 200 (403)
T 3laf_A 129 ESITAFMGDTVLLKCEVIGDPMP--------TIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPA 200 (403)
T ss_dssp CCEEEETTSCEEECCCEECSSCC--------EEEEEESSSBCCCCTTCCSEEECTTSCEEECSCCGGGCEEEEEEEECSS
T ss_pred CcEEEEcCCeEEEEEEEcccCCC--------eEEEEECCEeccccCCceEEEEcCCceEEEcccccccCEEEEEEEEcCC
Confidence 34577889999999999888777 69999986 223446689999999999999999999977
Q ss_pred CC-cEEEEEEEEecCCE------EEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCC
Q psy6361 75 GS-TSKTIQMNVLVPPF------FKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQS 134 (148)
Q Consensus 75 ~~-~~~~~~l~v~~~p~------~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~ 134 (148)
+. ......+.+...|. +... +....+.+|+.+.|.|.+.+.|.+.+.|++++..+....
T Consensus 201 ~~~~~~~~~l~v~~~p~~~~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~ 266 (403)
T 3laf_A 201 STRTGNEAEVRILSDPGLHRQLYFLQR-PSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRS 266 (403)
T ss_dssp CCCBCCCEEEEEECCCCCCEEEEEEEC-CCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSS
T ss_pred CceeccceeEEEecCCCcccCceEecC-CCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCC
Confidence 65 33456677765442 3334 666788899999999999999999999999999887543
No 75
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.76 E-value=5.5e-18 Score=108.51 Aligned_cols=114 Identities=18% Similarity=0.281 Sum_probs=85.9
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE--E--------ecCCc--eEEEecCCCCCCEEEEEEEEeCCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL--Y--------VTRNG--SFVINNIAEKDTNVYTCTVSNAAG 75 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~--~--------~~~~~--~l~i~~~~~~d~g~y~C~~~~~~~ 75 (148)
..+..|+.+.|.|.+.+ +.+ .+.|+|++. . ..... .|.|.+++.+|+|.|+|.+.|..+
T Consensus 18 ~~v~~G~~vtL~C~~~~-~~~--------~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 88 (218)
T 1uct_A 18 PVIPLDGSVKIQCQAIR-EAY--------LTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHY 88 (218)
T ss_dssp SEEETTCCEEEEECCCT-TCS--------EEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEEETTT
T ss_pred CccCCCCCEEEEEEcCC-CCC--------EEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEEcCCC
Confidence 36788999999999876 344 699999871 1 12234 899999999999999999999765
Q ss_pred C--cEEEEEEEEec---CCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeec
Q psy6361 76 S--TSKTIQMNVLV---PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 76 ~--~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~ 132 (148)
. .+..+.|.|.. +|.+... + ...+.+|+.+.|.|...+.|.+.+.|+|+|..+..
T Consensus 89 ~~~~s~~~~l~V~~~~~~P~i~~~-p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~ 148 (218)
T 1uct_A 89 RFRYSDTLELVVTGLYGKPFLSAD-R-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLP 148 (218)
T ss_dssp EEEECCCEEEEEECSSCCCEEEES-S-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCC
T ss_pred ceeecCCEEEEEcCcccCCEEEeC-C-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCcccc
Confidence 3 23445666653 5666555 4 45788999999999766777889999999987653
No 76
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.76 E-value=3.3e-18 Score=108.65 Aligned_cols=118 Identities=15% Similarity=0.135 Sum_probs=88.3
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-------------------------EEecCCceEEEecCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-------------------------LYVTRNGSFVINNIAE 60 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-------------------------~~~~~~~~l~i~~~~~ 60 (148)
....+..|+.+.|.|.+.+.+.+ .+.|+|.. ........|.|.+++.
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 80 (213)
T 3r06_A 9 SSLPASLGDRVTINCQASQDISN--------YLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLES 80 (213)
T ss_dssp SEEEECTTCCEEEEEEESSCCTT--------CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred CEEEecCCCcEEEEEEeCCCcCc--------eEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCc
Confidence 35678899999999999998766 59999831 0111234799999999
Q ss_pred CCCEEEEEEEEeCCCC-cEEEEEEEE---ecCCEEEeCCCceEEEecCCcEEEEeeeecccC--CeEEEEECCEEeec
Q psy6361 61 KDTNVYTCTVSNAAGS-TSKTIQMNV---LVPPFFKDEQQESVAIVVNHPMNISCSHYGVPT--PDFSWYKDGSLLRI 132 (148)
Q Consensus 61 ~d~g~y~C~~~~~~~~-~~~~~~l~v---~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~--~~~~W~~~g~~l~~ 132 (148)
+|+|.|.|.+.+..+. ......|.| ..+|.+... +.......|+.+.|.|.+.|.++ +.+.|++||..+..
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~-~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 157 (213)
T 3r06_A 81 EDIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIF-PPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRD 157 (213)
T ss_dssp GGCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEE-CCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred ccCEEEEEecccCCceEEcCCceEEEeccCCCceeeee-CCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCC
Confidence 9999999999886543 333456777 466777665 44444556788999999988654 38999999998864
No 77
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.75 E-value=1.1e-17 Score=106.12 Aligned_cols=115 Identities=12% Similarity=0.127 Sum_probs=88.1
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E--------------------EecCCceEEEecCCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L--------------------YVTRNGSFVINNIAEK 61 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~--------------------~~~~~~~l~i~~~~~~ 61 (148)
...+..|+.+.|.|.+. +.+ .+.|+|+. . .......|.|.+++.+
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 78 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNN--------FVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTD 78 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSS--------CEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGG
T ss_pred eEEEcCCCCEEEEEEEC--CCC--------eEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChh
Confidence 67889999999999998 555 59999931 0 1122346999999999
Q ss_pred CCEEEEEEEEeCCC--CcEEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEeeeecc--cCCeEEEEECCEEeec
Q psy6361 62 DTNVYTCTVSNAAG--STSKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCSHYGV--PTPDFSWYKDGSLLRI 132 (148)
Q Consensus 62 d~g~y~C~~~~~~~--~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~--p~~~~~W~~~g~~l~~ 132 (148)
|+|.|.|.+.+..+ .......|.|. .+|.+... +......+|+.+.|.|.+.|. |.+.+.|++||..+..
T Consensus 79 D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~-~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 156 (211)
T 3tv3_L 79 DEAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLF-PPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKA 156 (211)
T ss_dssp GCEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEE-CCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred HCEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEec-CCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCC
Confidence 99999999999876 34455677777 56777665 444444479999999999885 3578999999998854
No 78
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.75 E-value=3.9e-17 Score=102.88 Aligned_cols=113 Identities=23% Similarity=0.328 Sum_probs=84.9
Q ss_pred eeeEeeeccceeeeeeccc----CCCCcCCCCccEEEEeeCCEEe----------------------cCCceEEEecCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYT----NLPQSRNPGQVIKRYLKDLLYV----------------------TRNGSFVINNIAE 60 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~----~~p~~~~~~~~~v~W~~~~~~~----------------------~~~~~l~i~~~~~ 60 (148)
...+..|+.+.|.|.+... +.+ .+.|++++... .....|.|.+++.
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~--------~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~ 74 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQT--------RIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRP 74 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHC--------EEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCG
T ss_pred eEEEEeCCCEEEecccCCCccccccc--------EEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccc
Confidence 4678899999999999643 334 69999987221 2346899999999
Q ss_pred CCCEEEEEEEEeCCCCc-----EEEEEEEEecC---CEEEeCCCceEEEecCCcEEEEeee-ecccCCeEEEEECCEEee
Q psy6361 61 KDTNVYTCTVSNAAGST-----SKTIQMNVLVP---PFFKDEQQESVAIVVNHPMNISCSH-YGVPTPDFSWYKDGSLLR 131 (148)
Q Consensus 61 ~d~g~y~C~~~~~~~~~-----~~~~~l~v~~~---p~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~~~W~~~g~~l~ 131 (148)
+|+|.|.|.+.+..+.. ...+.|.|..+ |.+... ....|+.+.|.|.+ .|.|.|.+.|++||..+.
T Consensus 75 ~D~G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~-----~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~ 149 (201)
T 1dr9_A 75 SDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDF-----EIPTSNIRRIICSTSGGFPEPHLSWLENGEELN 149 (201)
T ss_dssp GGCEEEEEEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEE-----ECSSTTEEEEEEEEEEESSCEEEEEEESSCEEC
T ss_pred hhCeEEEEEEEcCCCCccccccccEEEEEEcCCCCCCceEec-----cCCCCCeEEEEEecCCccCCCEEEEEECCEECc
Confidence 99999999999976553 34566666654 333322 12347789999999 499999999999998886
Q ss_pred c
Q psy6361 132 I 132 (148)
Q Consensus 132 ~ 132 (148)
.
T Consensus 150 ~ 150 (201)
T 1dr9_A 150 A 150 (201)
T ss_dssp C
T ss_pred c
Confidence 4
No 79
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.75 E-value=2.1e-17 Score=101.44 Aligned_cols=114 Identities=10% Similarity=0.200 Sum_probs=88.7
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec-CCceEEEecCCCCCCEEEEEEEEeCCCCcEEEEEEEEe
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT-RNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVL 86 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 86 (148)
..+..|+.+.|.|.+.+.+.+. .+.|++++.... ....+.+.+++.+|+|.|+|.+.+... +..+.|.|.
T Consensus 14 ~~v~~G~~v~l~C~~~~~p~~~-------~~~W~~~g~~~~~~~~~~~~~~~~~~d~G~Y~C~~~~~~~--s~~~~l~v~ 84 (170)
T 3ry4_A 14 INVLQEDSVTLTCQGARSPESD-------SIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL--SDPVHLTVL 84 (170)
T ss_dssp SEEETTCEEEEEEESCCCSSSS-------CEEEEETTEECTTCCSSEEEEECCGGGCEEEEEEETTSBC--CCCEEEEEE
T ss_pred eEEECCCcEEEEEEecCCCCcc-------eEEEEECCeEcccCccceEEEecccccCeEEEEEEeCCCc--eEeEEEEEE
Confidence 4688999999999999886332 699999984443 356788899999999999999987543 334667777
Q ss_pred cCCEEEeCCCceEEEecCCcEEEEeee-ecccCCeEEEEECCEEeec
Q psy6361 87 VPPFFKDEQQESVAIVVNHPMNISCSH-YGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 87 ~~p~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~~~W~~~g~~l~~ 132 (148)
.+|..... ....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+..
T Consensus 85 ~~~~~~~~--~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~ 129 (170)
T 3ry4_A 85 FEWLVLQT--PHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKF 129 (170)
T ss_dssp CCSEEEEC--SCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEE
T ss_pred CCceEecC--CCceeecCCeEEEEEECCCCCCCceEEEEECCeEccc
Confidence 76655544 34567899999999998 4556789999999998763
No 80
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.75 E-value=5.5e-18 Score=114.90 Aligned_cols=117 Identities=15% Similarity=0.236 Sum_probs=77.5
Q ss_pred eeeEeeeccceeeeee-----cccCCCCcCCCCccEEEEeeCCEEec-------CCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 7 VEQAMLLDLIPMHSRY-----NYTNLPQSRNPGQVIKRYLKDLLYVT-------RNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~-----~~~~~p~~~~~~~~~v~W~~~~~~~~-------~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
...+..|+.+.|.|.. .+.+.| .+.|+|++.... ....|.|.++..+|+|.|+|.+.|..
T Consensus 129 ~~~~~~g~~~~l~C~~~~~~~~g~p~~--------~v~W~k~~~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 200 (349)
T 4dep_C 129 HKLYIEYGIQRITCPNVDGYFPSSVKP--------TITWYMGCYKIQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPE 200 (349)
T ss_dssp EEEETTCSEEEEECCSCTTSSCTTSCC--------EEEEEETTEECCSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEE
T ss_pred ceeeecCccEEEEcCCCcccccCCCCc--------eEEEeeCCEECCCccceeecCCEEEEeeeeecCCcEEEEEEEEee
Confidence 4467789999999985 555666 699999983332 23679999999999999999999976
Q ss_pred -CCc---EEEEEEEEec------CCEEEeCCCceE--EEecCCcEEEEeeee----cccCCeEEEEECCEEeec
Q psy6361 75 -GST---SKTIQMNVLV------PPFFKDEQQESV--AIVVNHPMNISCSHY----GVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 75 -~~~---~~~~~l~v~~------~p~~~~~~~~~~--~~~~g~~~~l~C~~~----g~p~~~~~W~~~g~~l~~ 132 (148)
+.. +..+.|.|.. +|.+... .... .+.+|+.+.|.|.+. |.|.|.+.|+++|..+..
T Consensus 201 ~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~-~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~ 273 (349)
T 4dep_C 201 NGRTFHLTRTLTVKVVGSPKNAVPPVIHSP-NDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDD 273 (349)
T ss_dssp TTEEEEEEEEEEEEEECCGGGCCSCEEC-----------------CCCEEEEECCCTTCCCEEEEESSCC----
T ss_pred CCEEEEEEEEEEEEEEccCCCCCCCeEecC-CCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccc
Confidence 333 4556666654 5666554 3322 678899999999998 568899999999988865
No 81
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.75 E-value=7e-18 Score=113.59 Aligned_cols=120 Identities=14% Similarity=0.216 Sum_probs=90.1
Q ss_pred ceeeeEeeeccceeeeeeccc-CCCCcCCCCccEEEEeeCCE-----E-----------e---------cCCceEEEecC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYT-NLPQSRNPGQVIKRYLKDLL-----Y-----------V---------TRNGSFVINNI 58 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~-~~p~~~~~~~~~v~W~~~~~-----~-----------~---------~~~~~l~i~~~ 58 (148)
.....+..|+.+.|.|.+.+. +.| .+.|+|++. . . .....|.|.++
T Consensus 10 p~~~~v~~G~~v~L~C~~~~~~p~~--------~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v 81 (327)
T 2wng_A 10 DKSVSVAAGESAILHCTVTSLIPVG--------PIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNI 81 (327)
T ss_dssp CSEEEEETTSCEEECCEESCCCSCC--------CEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSC
T ss_pred CCceEEecCCcEEEEEEccCcCCCc--------eEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccC
Confidence 456789999999999999987 666 599999851 0 0 23457999999
Q ss_pred CCCCCEEEEEEEEeCCCCc-----EEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCC--eEEEEECCEEee
Q psy6361 59 AEKDTNVYTCTVSNAAGST-----SKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTP--DFSWYKDGSLLR 131 (148)
Q Consensus 59 ~~~d~g~y~C~~~~~~~~~-----~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~--~~~W~~~g~~l~ 131 (148)
+.+|+|.|+|.+.|..+.. ...+.|.|..+|.......+...+.+|+.+.|.|.+.|.|.+ .+.|++||..+.
T Consensus 82 ~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~ 161 (327)
T 2wng_A 82 TPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELS 161 (327)
T ss_dssp CGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred ccccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEcc
Confidence 9999999999999976531 134567776544321110223567889999999999988766 899999999886
Q ss_pred c
Q psy6361 132 I 132 (148)
Q Consensus 132 ~ 132 (148)
.
T Consensus 162 ~ 162 (327)
T 2wng_A 162 D 162 (327)
T ss_dssp C
T ss_pred c
Confidence 4
No 82
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.75 E-value=6.1e-18 Score=120.80 Aligned_cols=117 Identities=13% Similarity=0.099 Sum_probs=92.7
Q ss_pred eeeEeeeccceeeeeec-ccCCCCcCCCCccEEEEeeCCEE-----------------ecCCceEEEecCCCCCCEEEEE
Q psy6361 7 VEQAMLLDLIPMHSRYN-YTNLPQSRNPGQVIKRYLKDLLY-----------------VTRNGSFVINNIAEKDTNVYTC 68 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~-~~~~p~~~~~~~~~v~W~~~~~~-----------------~~~~~~l~i~~~~~~d~g~y~C 68 (148)
...+..|+.+.|.|.+. +.+.| .++|++++.. ......|.|.++..+|+|.|+|
T Consensus 236 ~~~v~~G~~v~L~C~~~~g~p~p--------~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 307 (527)
T 3qs9_E 236 QLFLKVGEPLWIRCKAVHVNHGF--------GLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTC 307 (527)
T ss_dssp EEEECTTSCEEEEEEEEESSSCC--------CEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEE
T ss_pred ceEEeCCCeEEEEEEEccCCCCe--------EEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEE
Confidence 46678899999999997 77777 5999998711 1112459999999999999999
Q ss_pred EEEeCCCCcEEEEEEEEecCCEEEeCC-CceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCC
Q psy6361 69 TVSNAAGSTSKTIQMNVLVPPFFKDEQ-QESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQS 134 (148)
Q Consensus 69 ~~~~~~~~~~~~~~l~v~~~p~~~~~~-~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~ 134 (148)
.+.|. ....+.|.|..+|.+.... .....+.+|+.+.|.|.+.|.|.|.+.|+|||..+....
T Consensus 308 ~a~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~ 371 (527)
T 3qs9_E 308 SSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQ 371 (527)
T ss_dssp EETTE---EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBC
T ss_pred EEEeC---CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCc
Confidence 99887 5667788888888776541 234567789999999999999999999999999997654
No 83
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.75 E-value=2.3e-17 Score=109.98 Aligned_cols=122 Identities=13% Similarity=0.144 Sum_probs=92.2
Q ss_pred eeeEeeeccceeeeeecc-cCCCCcCCCCccEEEEeeCCEEec-----------CCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 7 VEQAMLLDLIPMHSRYNY-TNLPQSRNPGQVIKRYLKDLLYVT-----------RNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~-~~~p~~~~~~~~~v~W~~~~~~~~-----------~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
...+..|+.+.+.|.... .+.| .+.|+|++.... ....|.|.++..+|+|.|+|.+.|..
T Consensus 10 ~~~v~eg~~v~l~~~~~~~~p~~--------~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~ 81 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDKMTPKS--------EFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTD 81 (312)
T ss_dssp EEEECTTCCEEEEEECSSCCTTC--------CEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSC
T ss_pred eEEEecCCeEEEEEEEeCCCCCc--------EEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCC
Confidence 345667888888888763 4555 699999972221 22589999999999999999999987
Q ss_pred CCcEEEEEEEEec------------CCEEEeCCCc-eEEEecCCcEEEEeeee-cccCCeEEEEECCEEeecCCceEE
Q psy6361 75 GSTSKTIQMNVLV------------PPFFKDEQQE-SVAIVVNHPMNISCSHY-GVPTPDFSWYKDGSLLRIQSHYIT 138 (148)
Q Consensus 75 ~~~~~~~~l~v~~------------~p~~~~~~~~-~~~~~~g~~~~l~C~~~-g~p~~~~~W~~~g~~l~~~~~~~~ 138 (148)
+... ...+.+.. +|.+... +. ...+.+|+.+.|.|.+. +.|.+.+.|+++|..+....++..
T Consensus 82 g~~~-s~~l~v~~~~~~~~~~~~~~~p~~~~~-~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~ 157 (312)
T 2y23_A 82 GIAS-SYLIDEEELKRLLALSHEHKFPTVPVK-SELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKM 157 (312)
T ss_dssp CCCE-EEEECHHHHHHHHHHHHHHHSCBCCEE-EEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEE
T ss_pred CcEE-EEEEEEeeeeeeecccccCCCCccccc-cCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEE
Confidence 7543 44555432 6665554 33 67888999999999998 889999999999999987665543
No 84
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.75 E-value=2.1e-17 Score=109.32 Aligned_cols=118 Identities=13% Similarity=0.184 Sum_probs=92.8
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEee-CCEE-----------ecCCceEEEecCCCCCCEEEEEEEEe
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLK-DLLY-----------VTRNGSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~-~~~~-----------~~~~~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
.....+..|+.+.|.|.+.+.+. .+.|++ ++.. ......|.|.++..+|+|.|+|.+.+
T Consensus 11 ~~~~~v~~G~~v~l~C~~~~~p~---------~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n 81 (291)
T 2wim_A 11 LSKVELSVGESKFFTCTAIGEPE---------SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATD 81 (291)
T ss_dssp CSEEEEETTCCEEEEEEEESCCS---------EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred ccceEecCCCcEEEEEEEeCCCC---------ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEec
Confidence 34568899999999999987653 599999 4411 11124799999999999999999999
Q ss_pred CCCCc-EEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeec
Q psy6361 73 AAGST-SKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 73 ~~~~~-~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~ 132 (148)
..+.. +..+.|.|..+|.+... +....+.+|+.+.|.|.+.+.|.+.+.|++++..+..
T Consensus 82 ~~g~~~~~~~~l~v~~~~~~~~~-~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~ 141 (291)
T 2wim_A 82 AKGQTQEATVVLEIYQKLTFREV-VSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTT 141 (291)
T ss_dssp SSSCEEEEEEEEEEECCCBCCSC-CCSEEEETTSCEEECCCCBCSSCCEEEEECC----CB
T ss_pred ccCceEEEEEEEEecCCcceEeC-CCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccc
Confidence 88764 55677888888877766 6778899999999999999999999999999987764
No 85
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.75 E-value=4e-17 Score=118.65 Aligned_cols=117 Identities=16% Similarity=0.281 Sum_probs=94.8
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE---------ecCCceEEEecCCCCCCEEEEEEEEeCCCCc-
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY---------VTRNGSFVINNIAEKDTNVYTCTVSNAAGST- 77 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~---------~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~- 77 (148)
..+..|+.+.|.|.+.+ +.| .+.|++++.. ......|.|.++..+|+|.|+|.+.|..+..
T Consensus 477 ~~v~~g~~v~l~C~~~~-~~~--------~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 547 (642)
T 1e07_A 477 KPVEDKDAVAFTCEPEA-QNT--------TYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANR 547 (642)
T ss_pred eeecCCCeEEEEEECCC-CCc--------EEEEEECCEeCCCCCcEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCcc
Confidence 44668999999999984 444 6999999721 2235689999999999999999999998863
Q ss_pred EEEEEEEEecCCE-EEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCC
Q psy6361 78 SKTIQMNVLVPPF-FKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQS 134 (148)
Q Consensus 78 ~~~~~l~v~~~p~-~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~ 134 (148)
+..+.|.|..+|. +... +....+.+|+.+.|.|.+.|.|.|.+.|++||..+....
T Consensus 548 s~~~~l~V~~~p~~~~~~-~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~~~ 604 (642)
T 1e07_A 548 SDPVTLDVLYGPDTPIIS-PPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQHTQ 604 (642)
T ss_pred CCCEEEEEEeCCCcceec-CCceeEEcCCcEEEEEEeccCCCCeEEEEECCEECccCc
Confidence 4467888886554 4444 667889999999999999999999999999999887543
No 86
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.75 E-value=2.5e-17 Score=102.98 Aligned_cols=111 Identities=13% Similarity=0.132 Sum_probs=84.4
Q ss_pred eEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe----------cCCceEEEecCCCCCCEEEEEEEEeCCCC--
Q psy6361 9 QAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV----------TRNGSFVINNIAEKDTNVYTCTVSNAAGS-- 76 (148)
Q Consensus 9 ~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~----------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~-- 76 (148)
.+..|+.+.|.|.+.+.+ + .+.|+|++... .....|.|.+++.+|+|.|+|.+.+..+.
T Consensus 14 ~v~~G~~v~L~C~~~~~~-~--------~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~ 84 (188)
T 1oll_A 14 MVPKEKQVTICCQGNYGA-V--------EYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSE 84 (188)
T ss_dssp EEETTCCEEEEEECCTTC-C--------EEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTEECC
T ss_pred cCCCCCCEEEEEecCCCC-C--------EEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCCCCCC
Confidence 688999999999986532 2 69999998321 23467999999999999999999886432
Q ss_pred cEEEEEEEEec---CCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEee
Q psy6361 77 TSKTIQMNVLV---PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLR 131 (148)
Q Consensus 77 ~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~ 131 (148)
.+..+.|.|.. +|.+... + ...+.+|+.+.|.|.+.+. .+.+.|+|+|..+.
T Consensus 85 ~s~~~~l~V~~~~~~p~i~~~-p-~~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~ 139 (188)
T 1oll_A 85 PSNLLDLVVTEMYDTPTLSVH-P-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSH 139 (188)
T ss_dssp CCCCEEEEEESCSCCCEEEEE-S-CSEEETTCEEEEEEECSSS-CSEEEEEEESSSCE
T ss_pred CCCceEEEecccCCCCeEEEC-C-CCccccCCEEEEEEEcCCC-CCEEEEEECCcccc
Confidence 34456677653 5666654 4 4568899999999998664 56899999997765
No 87
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.74 E-value=6.9e-18 Score=113.74 Aligned_cols=118 Identities=21% Similarity=0.349 Sum_probs=94.5
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE------------ecCCceEEEecCCCCCCEEEEEEEEeCCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY------------VTRNGSFVINNIAEKDTNVYTCTVSNAAG 75 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~------------~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 75 (148)
..+..|+.+.|.|.+.+.+.| .+.|++++.. ......|.|.++..+|+|.|+|.+.|..+
T Consensus 133 ~~v~~g~~v~l~C~~~g~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 204 (334)
T 1ry7_B 133 LAVPAANTVRFRCPAAGNPTP--------SISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFG 204 (334)
T ss_dssp EEEETTCCEEEECCCCCSSCC--------EEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTE
T ss_pred EEecCCCcEEEEEEccCCCCC--------eEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCC
Confidence 467789999999999988777 6999998721 12345899999999999999999999988
Q ss_pred CcEEEEEEEEec----CCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEE----CCEEeecC
Q psy6361 76 STSKTIQMNVLV----PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYK----DGSLLRIQ 133 (148)
Q Consensus 76 ~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~----~g~~l~~~ 133 (148)
.....+.|.|.. +|.+....+....+.+|+.+.|.|.+.|.|.|.+.|++ ||..+..+
T Consensus 205 ~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~ 270 (334)
T 1ry7_B 205 SIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPD 270 (334)
T ss_dssp EEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTT
T ss_pred CEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCC
Confidence 777777888874 23343322466788999999999999999999999999 67766543
No 88
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.74 E-value=3.5e-17 Score=121.77 Aligned_cols=118 Identities=20% Similarity=0.341 Sum_probs=100.0
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-------------EEecCCceEEEecCCCCCCEEEEEEEEeC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-------------LYVTRNGSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-------------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
...+..|+.+.|.|.+.+.|.| .+.|+|++ +.......|.|.++..+|+|.|+|.+.|.
T Consensus 257 ~~~v~~g~~v~L~C~~~g~p~p--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 328 (816)
T 3dmk_A 257 MKTYSGSSTMALLCPAQGYPVP--------VFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNS 328 (816)
T ss_dssp EEEECTTSCEEECCCCBCSSCC--------EEEEEEECTTSSCEEECCCSSSEEEETTEEEECSCCGGGCEEEEEEEECS
T ss_pred ceEEeCCCeEEEEEEeeecCCC--------eEEEEeCCCCCccCcceecCCceEeccceEEECCCCHhHCEEEEEEEEcC
Confidence 4567889999999999998887 69999842 12223568999999999999999999999
Q ss_pred CCCcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecC
Q psy6361 74 AGSTSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQ 133 (148)
Q Consensus 74 ~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~ 133 (148)
.+..+....|.|..+|.+... +....+.+|+.+.|.|.+.|.|.+.+.|++||..+...
T Consensus 329 ~g~~~~~~~l~V~~~~~~~~~-~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~ 387 (816)
T 3dmk_A 329 VGGESVETVLTVTAPLSAKID-PPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS 387 (816)
T ss_dssp SCEEEEEEEEEECEEEEEEEE-SSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSCC
T ss_pred CCceEEEEEEEEcCCCceeeC-CCceEecCCCCEEEEEEEeccCCCEEEEEECCEECCCC
Confidence 888777778888877777766 77788899999999999999999999999999998654
No 89
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.74 E-value=4.9e-17 Score=121.00 Aligned_cols=121 Identities=18% Similarity=0.352 Sum_probs=101.2
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe-cCCceEEEecCCCCCCEEEEEEEEeCCCCcEEEEEEEEe
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV-TRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVL 86 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 86 (148)
..+..|+.+.|.|.+.+.+.| .+.|++++... .....|.|.++..+|+|.|+|.+.|..+.......+.+.
T Consensus 353 ~~v~~G~~v~l~C~~~g~p~~--------~v~W~k~g~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 424 (816)
T 3dmk_A 353 QTVDFGRPAVFTCQYTGNPIK--------TVSWMKDGKAIGHSESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLG 424 (816)
T ss_dssp EECCTTSCEEEEEEEEEECCC--------EEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEEECSSCEEEECCEEECC
T ss_pred eEecCCCCEEEEEEEeccCCC--------EEEEEECCEECCCCCCEEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEc
Confidence 456789999999999988877 69999998443 345789999999999999999999988876666666663
Q ss_pred ---cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceE
Q psy6361 87 ---VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYI 137 (148)
Q Consensus 87 ---~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~ 137 (148)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+++|..+....++.
T Consensus 425 ~~~~~p~i~~~-~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~ 477 (816)
T 3dmk_A 425 GRFDPPVIRQA-FQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQ 477 (816)
T ss_dssp CSSCCCEEEEE-CCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEE
T ss_pred cccCCCceEec-CcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcc
Confidence 56777766 667788999999999999999999999999999987665543
No 90
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.74 E-value=2e-17 Score=104.75 Aligned_cols=122 Identities=19% Similarity=0.256 Sum_probs=87.5
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E--------------------E-------ecCCce
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L--------------------Y-------VTRNGS 52 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~--------------------~-------~~~~~~ 52 (148)
.....+..|+.+.|.|.+.+.+.+. ...+.|+|++ . . ...+.+
T Consensus 6 p~~vtv~~G~~v~L~C~v~~~~~~~-----~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~s 80 (218)
T 4frw_A 6 SDVVTVVLGQDAKLPCFYRGDSGEQ-----VGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGS 80 (218)
T ss_dssp CSEEEEETTSCEEECCEECCCTTCE-----EEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCC
T ss_pred CCeEEEEcCCCEEEEEEEEcCCCCC-----ccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEE
Confidence 3467889999999999998877652 1148999975 0 0 011346
Q ss_pred EEEecCCCCCCEEEEEEEEeCCCC-cEEEEEEEEecCCE-EEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEe
Q psy6361 53 FVINNIAEKDTNVYTCTVSNAAGS-TSKTIQMNVLVPPF-FKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLL 130 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~~~~-~~~~~~l~v~~~p~-~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l 130 (148)
|.|.+++.+|+|.|.|.+.+..+. ......+.+..++. .... .....+.++..+.+.|.+.|.|.|.+.|++++..+
T Consensus 81 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~ 159 (218)
T 4frw_A 81 VLLRNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNP-GPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGT 159 (218)
T ss_dssp EEESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEE-CSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCE
T ss_pred EEEeeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeee-eeeeeeeeccccceeeeccCCcCceEEEEECCccc
Confidence 999999999999999998876554 33333444443332 2223 34456667888999999999999999999999877
Q ss_pred ec
Q psy6361 131 RI 132 (148)
Q Consensus 131 ~~ 132 (148)
..
T Consensus 160 ~~ 161 (218)
T 4frw_A 160 TS 161 (218)
T ss_dssp EE
T ss_pred cc
Confidence 64
No 91
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.74 E-value=1.3e-17 Score=113.80 Aligned_cols=113 Identities=11% Similarity=0.074 Sum_probs=91.2
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-EEecCCceEEEecCCCCCCEEEEEEEEeCCCCcEEEEEEEEe
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-LYVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVL 86 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 86 (148)
..+..|+.+.|.|.+.+.|.| .+.|++++ ........|.|.++..+|+|.|+|.+.+..+.....+.+.|.
T Consensus 106 ~~v~~G~~v~l~C~~~~~p~~--------~v~W~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~ 177 (363)
T 1wio_A 106 THLLQGQSLTLTLESPPGSSP--------SVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVL 177 (363)
T ss_dssp SSEESBSCEEEEEECCTTCCC--------CEEEECSSSCEEEESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEE
T ss_pred eEEecCCCEEEEEEcCCCCCC--------eEEEEcCCCcccccceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEe
Confidence 357889999999999887777 59999987 445567899999999999999999999876555555566666
Q ss_pred cCCEEEeCCCceEEEecCCcEEEEeeeec-----ccCCeEEEEECCEEeec
Q psy6361 87 VPPFFKDEQQESVAIVVNHPMNISCSHYG-----VPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 87 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g-----~p~~~~~W~~~g~~l~~ 132 (148)
..|... ....+.+|+.+.|.|.+.+ .|.|.+.|+++|..+..
T Consensus 178 ~~p~~~----~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~ 224 (363)
T 1wio_A 178 AFQKAS----SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSK 224 (363)
T ss_dssp CCSCSE----EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCC
T ss_pred cCCCCC----CceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccc
Confidence 444422 3567889999999998776 78889999999988765
No 92
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.74 E-value=1.8e-17 Score=105.18 Aligned_cols=119 Identities=13% Similarity=0.140 Sum_probs=86.9
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC--E-----------------------EecCCceEEEecCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL--L-----------------------YVTRNGSFVINNIAE 60 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~--~-----------------------~~~~~~~l~i~~~~~ 60 (148)
....+..|+.+.|.|.+.+.+.| .+.|+|+. . .......|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~--------~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 79 (210)
T 1lk3_L 8 PALTVSPGEKLTISCKASESVTS--------RMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEA 79 (210)
T ss_dssp SEEEECTTSCEEEEEEESSCCTT--------CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred CcEEEcCCCCEEEEeeCCCccCC--------CEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCH
Confidence 45678999999999999988766 59999831 0 001123799999999
Q ss_pred CCCEEEEEEEEeCCCCc-EEEEEEEEec---CCEEEeCCCceEEEecCCcEEEEeeeec-ccCC-eEEEEECCEEeecC
Q psy6361 61 KDTNVYTCTVSNAAGST-SKTIQMNVLV---PPFFKDEQQESVAIVVNHPMNISCSHYG-VPTP-DFSWYKDGSLLRIQ 133 (148)
Q Consensus 61 ~d~g~y~C~~~~~~~~~-~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~-~~~W~~~g~~l~~~ 133 (148)
+|+|.|.|.+.+..+.. .....|.|.. +|.+... +......+|+.+.|.|.+.| .|.+ .+.|+|||..+...
T Consensus 80 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~-~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~ 157 (210)
T 1lk3_L 80 DDTAIYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIF-PPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDG 157 (210)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEE-CCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTT
T ss_pred HHCeEEEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEE-CCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCC
Confidence 99999999999876542 2234566653 5666654 33333447889999999987 4544 89999999987654
No 93
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.74 E-value=1.8e-16 Score=102.91 Aligned_cols=117 Identities=15% Similarity=0.215 Sum_probs=85.9
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E-----------Ee-------------cCCceEEEec
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L-----------YV-------------TRNGSFVINN 57 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~-----------~~-------------~~~~~l~i~~ 57 (148)
...+..|+.+.|.|.+.+.+.+.. ....+.|++++ . .. ....+|.|.+
T Consensus 12 ~~~v~~G~~v~L~C~~~g~p~~~~---~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 88 (248)
T 3pv7_A 12 TQITPLNDNVTIFCNIFYSQPLNI---TSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPG 88 (248)
T ss_dssp EEEEETTSCEEECCEEEESSCCCT---TSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESS
T ss_pred CeEEeCCCCEEEeeEEecCCCcCC---CceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCC
Confidence 457889999999999988776521 12359999963 0 00 1123499999
Q ss_pred CCCCCCEEEEEEEEeCCCCcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeec-ccCC-eEEEEECCE
Q psy6361 58 IAEKDTNVYTCTVSNAAGSTSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYG-VPTP-DFSWYKDGS 128 (148)
Q Consensus 58 ~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~-~~~W~~~g~ 128 (148)
++.+|+|.|+|.+.+..+.....+.|.|..+|.+... +. .....|..+.|.|.+.| .|.| .+.|+++|.
T Consensus 89 v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~-~~-~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~ 159 (248)
T 3pv7_A 89 IQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLL-LD-QVGMKENEDKYMCESSGFYPEAINITWEKQTQ 159 (248)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEE-CC---------CEEEEEEEEEBSSCCEEEEEEECS
T ss_pred CCHHHCeEEEEEEEeCCccceeEEEEEEecCCceEEe-cC-CccccCCCcEEEEEEccEECCCeEEEEEECCc
Confidence 9999999999999998877777888999888887766 43 33456777889999988 7888 999999985
No 94
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.74 E-value=2.9e-18 Score=116.60 Aligned_cols=116 Identities=21% Similarity=0.240 Sum_probs=94.7
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE---------EecCCceEEEecCCCCCCE-EEEEEEEeCCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL---------YVTRNGSFVINNIAEKDTN-VYTCTVSNAAGS 76 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~---------~~~~~~~l~i~~~~~~d~g-~y~C~~~~~~~~ 76 (148)
...+..|+.+.|.|.+.+.+.| .+.|++++. .......|.|.+++.+|+| .|+|.+.+..+.
T Consensus 167 ~~~v~~G~~v~L~C~~~g~p~p--------~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~ 238 (347)
T 2ifg_A 167 NASVDVGDDVLLRCQVEGRGLE--------QAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGR 238 (347)
T ss_dssp SSCCBTTCCEEEEEEEECSSCC--------CCCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEETTEE
T ss_pred ceEEeCCCcEEEEEEEecCCCC--------EEEEEcCCceeecccccceecccceEEEeeCChHHCCCeEEEEEEcCCCC
Confidence 4567889999999999998887 589999871 2234568999999999999 999999999887
Q ss_pred cEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCc
Q psy6361 77 TSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSH 135 (148)
Q Consensus 77 ~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~ 135 (148)
.+..+.|.|..+|.+ .. ....+|+.+.+.|.+.|.|.|.+.|+++|..+.....
T Consensus 239 ~~~~~~l~V~~~P~i-~~----~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~ 292 (347)
T 2ifg_A 239 AEVSVQVNVSFPASV-QL----HTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSF 292 (347)
T ss_dssp CCEEECCCCBEEEEE-EE----CCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSS
T ss_pred EEEEEEEEEcCCCee-ee----ccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcc
Confidence 777777777777775 11 1235789999999999999999999999999885544
No 95
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.73 E-value=7.7e-19 Score=117.41 Aligned_cols=131 Identities=13% Similarity=0.135 Sum_probs=91.8
Q ss_pred eeeEeeeccceeeeeeccc-CCCCcCCCCccEEEEeeCCEEec---------CCceEEEecCCCCCCEEEEEEEEeCCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYT-NLPQSRNPGQVIKRYLKDLLYVT---------RNGSFVINNIAEKDTNVYTCTVSNAAGS 76 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~-~~p~~~~~~~~~v~W~~~~~~~~---------~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 76 (148)
...+..|+.+.|.|.+.+. +.| .+.|+|++.... ....|.|.+++.+|+|.|+|.+.|..+.
T Consensus 15 ~~~v~~G~~v~l~C~~~~~~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~ 86 (317)
T 2y25_A 15 SWEVTGECNVLLKCKVANIKKET--------HIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGK 86 (317)
T ss_dssp EEEEETTTEEEEEEEEESCCTTC--------EEEEEETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESSSCE
T ss_pred eEEECCCCeEEEEEEEcCCCCCC--------EEEEEECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECCCCc
Confidence 3678899999999999887 555 799999983222 2358999999999999999999998876
Q ss_pred cEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeec----------ccCCeEEEEECCEEeecCCceEEE------E
Q psy6361 77 TSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYG----------VPTPDFSWYKDGSLLRIQSHYITF------F 140 (148)
Q Consensus 77 ~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g----------~p~~~~~W~~~g~~l~~~~~~~~~------~ 140 (148)
....+.|.+...|.+... +....+.+|+.+.+.|.+.+ .|.+.+.|+++|..+....++... .
T Consensus 87 ~~~~~~l~v~~~~~~~~~-~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~ 165 (317)
T 2y25_A 87 DKSRLKLVDEAFKELMME-VCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIW 165 (317)
T ss_dssp EEEEECCSTHHHHHHHHH-HHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSSEEE
T ss_pred EEEEEEEEEecCcccccc-CCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCCEEE
Confidence 555544444333332222 22233445666666666655 688999999999998876655443 2
Q ss_pred EEEEee
Q psy6361 141 LFFQRL 146 (148)
Q Consensus 141 l~~~~~ 146 (148)
|.|..+
T Consensus 166 L~i~~~ 171 (317)
T 2y25_A 166 LQINEP 171 (317)
T ss_dssp EEEESC
T ss_pred EEECcC
Confidence 666543
No 96
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.73 E-value=8.6e-17 Score=101.52 Aligned_cols=113 Identities=10% Similarity=0.196 Sum_probs=84.2
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE----------e--cCCceEEEecCCCCCCEEEEEEEEeCC-
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY----------V--TRNGSFVINNIAEKDTNVYTCTVSNAA- 74 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~----------~--~~~~~l~i~~~~~~d~g~y~C~~~~~~- 74 (148)
..+..|+.+.|.|.+.+ +.+ .+.|+|++.. . .....|.|.+++.+|+|.|+|.+.+..
T Consensus 17 ~~v~~G~~v~L~C~~~~-~~~--------~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~ 87 (201)
T 1nkr_A 17 PLVKSEETVILQCWSDV-MFE--------HFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHS 87 (201)
T ss_dssp SEEETTCCEEEEEEESS-CCS--------EEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBTTB
T ss_pred CccCCCCcEEEEEeccC-CCC--------EEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEecCCC
Confidence 45778999999999863 444 6999998711 1 124679999999999999999998642
Q ss_pred ----CCcEEEEEEEEec---CCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeec
Q psy6361 75 ----GSTSKTIQMNVLV---PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 75 ----~~~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~ 132 (148)
...+..+.|.|.. +|.+... +. ..+.+|+.+.|.|.+.+ +.+.+.|+|+|..+..
T Consensus 88 ~~~~~~~s~~~~l~V~~~~~~p~i~~~-p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~ 149 (201)
T 1nkr_A 88 PYQVSAPSDPLDIVIIGLYEKPSLSAQ-PG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHER 149 (201)
T ss_dssp TTCCCCCCCCEEEEEECSSCCCEEEEE-SC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCE
T ss_pred CccccCCCCCEEEEeeccCCCCceecC-CC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCc
Confidence 1234455666663 4666655 43 46889999999999876 4678999999987653
No 97
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.73 E-value=7.8e-17 Score=105.01 Aligned_cols=115 Identities=13% Similarity=0.215 Sum_probs=92.6
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe-cCCceEEEecCCCCCCEEEEEEEEeCCCCcEEEEEEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV-TRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNV 85 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v 85 (148)
...+..|+.+.|.|.+.+.+.+. .+.|++++... .....|.|.++..+|+|.|+|.+.+..+. ..+.+.|
T Consensus 10 ~~~v~~G~~v~l~C~~~~~~~~~-------~~~W~~~g~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~s--~~~~l~v 80 (262)
T 3rjd_A 10 WVSVFQEETVTLHCEVLHLPGSS-------STQWFLNGTATQTSTPSYRITSASVNDSGEYRCQRGLSGRS--DPIQLEI 80 (262)
T ss_dssp CSEEETTCCEEEEEECSSCCCTT-------CEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEESSSCCC--CCEEEEE
T ss_pred cEEeeCCCeEEEEEECCCCCCCc-------eEEEEECCEEeeccCCeEEEecCCcccCeEEEEEEecCCcc--ccEEEEE
Confidence 45788999999999998887763 59999998544 45788999999999999999999876543 3456777
Q ss_pred ecCCEEEeCCCceEEEecCCcEEEEeee-ecccCCeEEEEECCEEeec
Q psy6361 86 LVPPFFKDEQQESVAIVVNHPMNISCSH-YGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 86 ~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~~~W~~~g~~l~~ 132 (148)
..++.... +....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+..
T Consensus 81 ~~~~~~~~--~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~ 126 (262)
T 3rjd_A 81 HRGWLLLQ--VSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKF 126 (262)
T ss_dssp ECSSEEEE--ESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEE
T ss_pred eccceEec--CCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccc
Confidence 66664443 345678899999999998 7788889999999998864
No 98
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.73 E-value=1.9e-16 Score=105.61 Aligned_cols=128 Identities=10% Similarity=0.190 Sum_probs=92.5
Q ss_pred eeeEeeeccceeeeeec-ccCCCCcCCCCccEEEEeeCCEEecC-------------CceEEEecCCCCCCEEEEEEEEe
Q psy6361 7 VEQAMLLDLIPMHSRYN-YTNLPQSRNPGQVIKRYLKDLLYVTR-------------NGSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~-~~~~p~~~~~~~~~v~W~~~~~~~~~-------------~~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
...+..|+.+.|.|.+. +.+.| .+.|++++..... ...|.|.++..+|+|.|+|.+.+
T Consensus 116 ~~~v~~G~~v~l~C~~~~~~p~~--------~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 187 (312)
T 2y23_A 116 AVEILEKGQVRFWMQAEKLSGNA--------KVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD 187 (312)
T ss_dssp EEEECSSSCEEEEEEESCCCSSC--------EEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEES
T ss_pred ceEEeeCCCEEEEEEEEeCCCCC--------EEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEe
Confidence 56788899999999999 66766 6999999832221 12399999999999999999986
Q ss_pred CCCCcEEEEEEEEe---------------------cCCEEEeCCCceEEEecCCcEEEEeeeecccCC-eEEEEECCEEe
Q psy6361 73 AAGSTSKTIQMNVL---------------------VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTP-DFSWYKDGSLL 130 (148)
Q Consensus 73 ~~~~~~~~~~l~v~---------------------~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~~~W~~~g~~l 130 (148)
...... ..+.+. .+|.+... ....+.+|+.+.|.|.+.+.|.| .+.|+++|..+
T Consensus 188 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~ 263 (312)
T 2y23_A 188 GKATNH--STVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEY--LSWEVTGECNVLLKCKVANIKKETHIVWYKDEREI 263 (312)
T ss_dssp SSCEEE--EEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEE--EEEEEETTTEEEEEEEEESCCSSCEEEEEETTEEE
T ss_pred CCceEE--EEEEEcchhhhhhcccccccccchhhccCCceeec--ceEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEEC
Confidence 544332 233331 23555533 23678899999999999999988 99999999999
Q ss_pred ecCCceEE----EEEEEEee
Q psy6361 131 RIQSHYIT----FFLFFQRL 146 (148)
Q Consensus 131 ~~~~~~~~----~~l~~~~~ 146 (148)
....++.. ..|.|..+
T Consensus 264 ~~~~~~~~~~~~~~L~I~~v 283 (312)
T 2y23_A 264 SVDEKHDFKDGICTLLITEF 283 (312)
T ss_dssp EEECCC----CEEEEEECSC
T ss_pred CCCCcEEEECCEEEEEECcC
Confidence 85444432 35555543
No 99
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.73 E-value=1.9e-17 Score=105.15 Aligned_cols=119 Identities=12% Similarity=0.214 Sum_probs=85.7
Q ss_pred eeeeEeeeccceeeeeecccCC---CCcCCCCccEEEEeeCC---EE----------------------ecCCceEEEec
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNL---PQSRNPGQVIKRYLKDL---LY----------------------VTRNGSFVINN 57 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~---p~~~~~~~~~v~W~~~~---~~----------------------~~~~~~l~i~~ 57 (148)
....+..|+.+.|.|.+.+.+. | .+.|+|++ .. ......|.|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 79 (212)
T 1q0x_L 8 SALTTSPGETVTLTCRSSTGAVTTSN--------YANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITG 79 (212)
T ss_dssp SEEEECTTCCEEEEEEESSSCCCGGG--------CCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred CeEeecCCCCEEEEEEecccccCCCC--------eEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECC
Confidence 4567899999999999988763 4 59999852 10 01223799999
Q ss_pred CCCCCCEEEEEEEEeCCCC-cEEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEeeeeccc-CC-eEEEEECCEEe
Q psy6361 58 IAEKDTNVYTCTVSNAAGS-TSKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCSHYGVP-TP-DFSWYKDGSLL 130 (148)
Q Consensus 58 ~~~~d~g~y~C~~~~~~~~-~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p-~~-~~~W~~~g~~l 130 (148)
++.+|+|.|.|.+.+..+. ......|.|. .+|.+... +......+|+.+.|.|.+.|.+ .+ .+.|++||..+
T Consensus 80 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~-~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l 158 (212)
T 1q0x_L 80 AQTEDEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLF-PPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPV 158 (212)
T ss_dssp CCGGGCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEE-CCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred CCccCCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEe-CCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeC
Confidence 9999999999999987653 2233456663 46666654 3333344688999999998854 33 89999999988
Q ss_pred ecC
Q psy6361 131 RIQ 133 (148)
Q Consensus 131 ~~~ 133 (148)
...
T Consensus 159 ~~~ 161 (212)
T 1q0x_L 159 TAG 161 (212)
T ss_dssp CTT
T ss_pred CCC
Confidence 643
No 100
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.72 E-value=2.4e-17 Score=110.86 Aligned_cols=128 Identities=14% Similarity=0.164 Sum_probs=96.2
Q ss_pred eEeee---ccceeeee-ecccCCCCcCCCCccEEEEeeCC-------EEecCC------ceEEEecCCCCCCEEEEEEEE
Q psy6361 9 QAMLL---DLIPMHSR-YNYTNLPQSRNPGQVIKRYLKDL-------LYVTRN------GSFVINNIAEKDTNVYTCTVS 71 (148)
Q Consensus 9 ~~~~g---~~~~l~C~-~~~~~~p~~~~~~~~~v~W~~~~-------~~~~~~------~~l~i~~~~~~d~g~y~C~~~ 71 (148)
.+..| +.+.|.|. ..+.|.| .+.|++++ ...... ..|.|..+..+|+|.|+|.+.
T Consensus 143 ~~~~g~~~~~~~l~C~~~~~~p~~--------~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 214 (331)
T 3u83_A 143 RAKKGQDDKVLVATCTSANGKPPS--------VVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVN 214 (331)
T ss_dssp EECTTCCCCEEEEEEEEEEEBSCC--------EEEEEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEE
T ss_pred eecCCCccceEEEEEEecCCcCCc--------eEEEEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEe
Confidence 44555 67999997 7777777 69999953 111122 347777779999999999999
Q ss_pred eCCCCcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCe-EEEEECCEEeecCCceEEEEEEEE
Q psy6361 72 NAAGSTSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPD-FSWYKDGSLLRIQSHYITFFLFFQ 144 (148)
Q Consensus 72 ~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~-~~W~~~g~~l~~~~~~~~~~l~~~ 144 (148)
|..+..+..+.|.|..+|.+....+....+.+|+.+.|.|.+.|.|.|. +.|++++..+.....+....|.|.
T Consensus 215 n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~L~i~ 288 (331)
T 3u83_A 215 YHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRTLFFK 288 (331)
T ss_dssp ETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEETTEEEEC
T ss_pred cCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccceecCcEEEEe
Confidence 9988777788888888887765423445577899999999999999998 999999998866543333345554
No 101
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.72 E-value=1.1e-17 Score=112.97 Aligned_cols=119 Identities=15% Similarity=0.178 Sum_probs=96.0
Q ss_pred eeeeEeeeccceeeeeec-------ccCCCCcCCCCccEEEEeeCCE-----------EecCCceEEEecCCCCCCEEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYN-------YTNLPQSRNPGQVIKRYLKDLL-----------YVTRNGSFVINNIAEKDTNVYT 67 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~-------~~~~p~~~~~~~~~v~W~~~~~-----------~~~~~~~l~i~~~~~~d~g~y~ 67 (148)
....+..|+.+.|.|.+. +.+.+ .+.|++++. ....+..|.|.++..+|+|.|+
T Consensus 26 ~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 97 (339)
T 3o4o_C 26 KREFRLEGEPVALRCPQVPYWLWASVSPRI--------NLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYV 97 (339)
T ss_dssp CCEEEETTBCCEEECTTSCSSCCSTTSSCC--------BCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCEEEE
T ss_pred eEEEEECCccEEEEeccccccccccCCCCc--------eEEEEECCCCcccCccccccEEeeCCeEEECCCCcccCEEEE
Confidence 356789999999999998 66666 599999872 2233568999999999999999
Q ss_pred EEEEeCCCCcEEEEEEEEecCCEEE--eCCCceEEEecCCcEEEEee-----eecccCCeEEEEECCEEeecC
Q psy6361 68 CTVSNAAGSTSKTIQMNVLVPPFFK--DEQQESVAIVVNHPMNISCS-----HYGVPTPDFSWYKDGSLLRIQ 133 (148)
Q Consensus 68 C~~~~~~~~~~~~~~l~v~~~p~~~--~~~~~~~~~~~g~~~~l~C~-----~~g~p~~~~~W~~~g~~l~~~ 133 (148)
|.+.+..+.....+.|.|...|... .. .....+.+|+.+.|.|. +.|.|.+.+.|+++|..+...
T Consensus 98 C~~~n~~g~~~~~~~l~V~~~~~~~~~~~-~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~ 169 (339)
T 3o4o_C 98 CTTRNASYCDKMSIELRVFENTDAFLPFI-SYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKD 169 (339)
T ss_dssp CCEEETTEEEEEEEEEEEECSCGGGHHHH-CEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTT
T ss_pred EEEECCcceEEEEEEEEEEcCCCcccccc-ccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCC
Confidence 9999988877777888887655432 22 33457889999999999 788999999999999988754
No 102
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.72 E-value=3.5e-17 Score=105.36 Aligned_cols=117 Identities=13% Similarity=0.133 Sum_probs=86.1
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-------------------------EEecCCceEEEecCCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-------------------------LYVTRNGSFVINNIAEK 61 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-------------------------~~~~~~~~l~i~~~~~~ 61 (148)
...+..|+.+.|.|.+.+.+.+ .+.|+|.. ........|.|.+++.+
T Consensus 33 ~~~v~~G~~v~L~C~~~~~~~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 104 (237)
T 3sob_L 33 SLSASVGDRVTITCRASQDVST--------AVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPE 104 (237)
T ss_dssp EEEEETTCCEEEEEEESSCCTT--------CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eEEEeCCCcEEEEEecCCCCCc--------eEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChh
Confidence 4678899999999999988666 59999831 01113457999999999
Q ss_pred CCEEEEEEEEeCCCC-cEEEEEEEEe---cCCEEEeCCCceEEEecCCcEEEEeeeec-cc-CCeEEEEECCEEeec
Q psy6361 62 DTNVYTCTVSNAAGS-TSKTIQMNVL---VPPFFKDEQQESVAIVVNHPMNISCSHYG-VP-TPDFSWYKDGSLLRI 132 (148)
Q Consensus 62 d~g~y~C~~~~~~~~-~~~~~~l~v~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p-~~~~~W~~~g~~l~~ 132 (148)
|+|.|.|.+.+..+. ......+.|. .+|.+... +......+|+.+.|.|.+.+ .| .+.+.|++||..+..
T Consensus 105 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~-~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~ 180 (237)
T 3sob_L 105 DFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIF-PPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSG 180 (237)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEE-CCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCS
T ss_pred hCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEe-CCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCC
Confidence 999999999876643 2233455653 56666554 33334446888999999987 44 589999999998864
No 103
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.72 E-value=1.3e-16 Score=113.55 Aligned_cols=119 Identities=13% Similarity=0.166 Sum_probs=91.2
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EEe--------------------cCCceEEEecCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LYV--------------------TRNGSFVINNIAE 60 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~~--------------------~~~~~l~i~~~~~ 60 (148)
....+..|+.+.|.|.+.+.+.+ .+.|+|++ ... .....|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~--------~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 79 (523)
T 2rcj_C 8 PSASGTPGQRVTISCTGTSSGSI--------TVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEA 79 (523)
T ss_pred CceEEecCCcEEEEEEEeccCCc--------eEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCCh
Confidence 35688999999999999887766 69999963 100 1123799999999
Q ss_pred CCCEEEEEEEEeCCCC---cEEEEEEEE----ecCCEEEeCCCceEEEecCCcEEEEeeeecccCC--eEEEEECCEEee
Q psy6361 61 KDTNVYTCTVSNAAGS---TSKTIQMNV----LVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTP--DFSWYKDGSLLR 131 (148)
Q Consensus 61 ~d~g~y~C~~~~~~~~---~~~~~~l~v----~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~--~~~W~~~g~~l~ 131 (148)
+|+|.|+|.+.|..+. ......|.| ..+|.+... +......+|+.+.|.|.+.|.|++ .+.|+|||..+.
T Consensus 80 ~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~-~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 158 (523)
T 2rcj_C 80 EDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLF-PPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVK 158 (523)
T ss_pred hhCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEec-CCcccccCCCceEEEEEeccccCCceEEEEecCCCCCC
Confidence 9999999999987652 234456777 356777665 556667789999999999888654 899999998876
Q ss_pred cC
Q psy6361 132 IQ 133 (148)
Q Consensus 132 ~~ 133 (148)
..
T Consensus 159 ~~ 160 (523)
T 2rcj_C 159 AG 160 (523)
T ss_pred Cc
Confidence 43
No 104
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.72 E-value=5.1e-17 Score=105.37 Aligned_cols=119 Identities=12% Similarity=0.204 Sum_probs=85.7
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEee----------------CC-----------EE----ecCCceEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLK----------------DL-----------LY----VTRNGSFV 54 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~----------------~~-----------~~----~~~~~~l~ 54 (148)
....+..|+.+.|.|.+.+.+.+ .+.|+| ++ .. ......|.
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~--------~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~ 80 (246)
T 4dzb_B 9 SWVISKSGTSVKIECRSLDFQAT--------TMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLT 80 (246)
T ss_dssp SEEEEETTSCEEEEEEESSSCCC--------SEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEE
T ss_pred cEEEEeCCCcEEEEeEecCCCce--------EEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEE
Confidence 35678899999999999988776 599999 21 00 11234799
Q ss_pred EecCCCCCCEEEEEEEEeCCC----CcEEEEEEEEec------CCEEEeCCCceEEEecCCcEEEEeeeecccCC--eEE
Q psy6361 55 INNIAEKDTNVYTCTVSNAAG----STSKTIQMNVLV------PPFFKDEQQESVAIVVNHPMNISCSHYGVPTP--DFS 122 (148)
Q Consensus 55 i~~~~~~d~g~y~C~~~~~~~----~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~--~~~ 122 (148)
|.+++.+|+|.|.|.+.+..+ .......|.|.. +|.+....+....+.+|+.+.|.|.+.|.+++ .+.
T Consensus 81 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~ 160 (246)
T 4dzb_B 81 VTSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELS 160 (246)
T ss_dssp ECSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEE
T ss_pred ECCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEE
Confidence 999999999999999987543 122344566653 55554331333345568999999999887654 899
Q ss_pred EEECCEEeec
Q psy6361 123 WYKDGSLLRI 132 (148)
Q Consensus 123 W~~~g~~l~~ 132 (148)
|++||..+..
T Consensus 161 W~k~g~~l~~ 170 (246)
T 4dzb_B 161 WWVNGKEVHS 170 (246)
T ss_dssp EEETTEEECT
T ss_pred EEECCEECCC
Confidence 9999999864
No 105
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.72 E-value=3.3e-16 Score=113.88 Aligned_cols=128 Identities=17% Similarity=0.252 Sum_probs=99.5
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEecCCceEEEecCCCCCCEEEEEEEEeCCCCcEEE--EEEEE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKT--IQMNV 85 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~--~~l~v 85 (148)
..+..|+.+.|.|.+.+.|.| .+.|++++........|.|.++..+|+|.|+|.+.|..+..... ..+.+
T Consensus 391 ~~~~~g~~~~l~C~~~g~p~~--------~i~W~~~g~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v 462 (642)
T 1e07_A 391 TYYRPGVNLSLSCHAASNPPA--------QYSWLIDGNIQQHTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITV 462 (642)
T ss_pred eEecCCCcEEEEEEcCccCCC--------eEEEEECCEEcCCCceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEE
Confidence 456789999999999998887 69999999777778899999999999999999999988764333 44455
Q ss_pred ec---CCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceEE----EEEEEEee
Q psy6361 86 LV---PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYIT----FFLFFQRL 146 (148)
Q Consensus 86 ~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~~----~~l~~~~~ 146 (148)
.. +|.+.. .....+.+|+.+.|.|.+.+ |.+.+.|+++|..+....++.. ..|.|..+
T Consensus 463 ~~~~~~p~i~~--~~~~~v~~g~~v~l~C~~~~-~~~~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v 527 (642)
T 1e07_A 463 SAELPKPSISS--NNSKPVEDKDAVAFTCEPEA-QNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNV 527 (642)
T ss_pred eccCCCceEec--CCceeecCCCeEEEEEECCC-CCcEEEEEECCEeCCCCCcEEEcCCCcEEEEeec
Confidence 42 444443 34466789999999999884 7889999999999877655442 24555543
No 106
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.72 E-value=5.5e-17 Score=100.90 Aligned_cols=107 Identities=11% Similarity=0.152 Sum_probs=83.0
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE--Ee--------------------------cCCceEEEecC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL--YV--------------------------TRNGSFVINNI 58 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~--~~--------------------------~~~~~l~i~~~ 58 (148)
...+..|+.+.|.|.+.+.+.+ .+.|++++. .. .....|.|.++
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~--------~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v 75 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSI--------QFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNL 75 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCC--------CEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSC
T ss_pred cEEEeCCCCEEEEEEEcCCCce--------EEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecC
Confidence 5678999999999999877776 599999861 11 11345999999
Q ss_pred CCCCCEEEEEEEEeCCCCcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEe
Q psy6361 59 AEKDTNVYTCTVSNAAGSTSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLL 130 (148)
Q Consensus 59 ~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l 130 (148)
+.+|+|.|+|.+.+..+ .+.|.|.. +. . +....+.+|+.+.|.|.+.+.|.|.+.|++++..+
T Consensus 76 ~~~D~G~Y~C~~~~~~~----~~~l~V~~---~~-~-~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~ 138 (184)
T 2ny1_B 76 KIEDSDTYICEVEDQKE----EVQLLVFG---LT-A-NSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN 138 (184)
T ss_dssp CGGGCEEEEEEETTEEE----EEEEEEEE---EE-E-SSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCE
T ss_pred CHHHCEEEEEEEEcCCC----cEEEEEEE---ec-C-CCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcc
Confidence 99999999999876533 44555542 22 2 34457889999999999988999999999988665
No 107
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.71 E-value=5.9e-17 Score=106.39 Aligned_cols=118 Identities=14% Similarity=0.238 Sum_probs=83.1
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC--------------------------EEe----cCCceEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL--------------------------LYV----TRNGSFVI 55 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~--------------------------~~~----~~~~~l~i 55 (148)
....+..|+.+.|.|.+. .+.+ .+.|+|.. ... .....|.|
T Consensus 34 ~~v~v~~G~~v~L~C~~~-~~~~--------~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (268)
T 3pl6_D 34 SNKVTEKGKYVELRCDPI-SGHT--------ALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKI 104 (268)
T ss_dssp SEEEEETTCCEEEEEBCB-TTCC--------EEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEE
T ss_pred CEEEecCCCCEEEEEEeC-CCCc--------eEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEE
Confidence 456789999999999986 3333 69999921 011 11457999
Q ss_pred ecCCCCCCEEEEEEEEeC--CCCcEEEEEEEEec------CCEEEeCCCceEEEecCCcEEEEeeeecccCC--eEEEEE
Q psy6361 56 NNIAEKDTNVYTCTVSNA--AGSTSKTIQMNVLV------PPFFKDEQQESVAIVVNHPMNISCSHYGVPTP--DFSWYK 125 (148)
Q Consensus 56 ~~~~~~d~g~y~C~~~~~--~~~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~--~~~W~~ 125 (148)
.+++.+|+|.|+|.+.+. .........|.|.. +|.+....+....+.+|+.+.|.|.+.|.+++ .+.|++
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~ 184 (268)
T 3pl6_D 105 QRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 184 (268)
T ss_dssp CSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred CCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEE
Confidence 999999999999999974 22233344566654 55544331333345568999999999886554 899999
Q ss_pred CCEEeec
Q psy6361 126 DGSLLRI 132 (148)
Q Consensus 126 ~g~~l~~ 132 (148)
||..+..
T Consensus 185 ~g~~l~~ 191 (268)
T 3pl6_D 185 NGKEVHS 191 (268)
T ss_dssp SSSEECT
T ss_pred CCEECCC
Confidence 9998854
No 108
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.71 E-value=9.9e-17 Score=104.22 Aligned_cols=112 Identities=15% Similarity=0.191 Sum_probs=81.9
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E--------------------EecCCceEEEecCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L--------------------YVTRNGSFVINNIAE 60 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~--------------------~~~~~~~l~i~~~~~ 60 (148)
....+..|+.+.|.|.+.+.+.| .+.|+|.. . .......|.|.++..
T Consensus 12 ~~~~v~~G~~v~L~C~~~~~~~~--------~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 83 (250)
T 3esu_F 12 SSLSASLGDRVTISCRASQDIRN--------YLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQ 83 (250)
T ss_dssp SEEEECTTCCEEEEEEESSCCTT--------CEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred CEEEeeCCCcEEEEEEecccCCc--------eEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCCh
Confidence 34668899999999999998887 49999842 0 011123799999999
Q ss_pred CCCEEEEEEEEeCCCC-cEEEEEEEEecC-------------------CEEEeCCCceEEEecCCcEEEEeeeeccc--C
Q psy6361 61 KDTNVYTCTVSNAAGS-TSKTIQMNVLVP-------------------PFFKDEQQESVAIVVNHPMNISCSHYGVP--T 118 (148)
Q Consensus 61 ~d~g~y~C~~~~~~~~-~~~~~~l~v~~~-------------------p~~~~~~~~~~~~~~g~~~~l~C~~~g~p--~ 118 (148)
+|+|.|.|.+.+..+. ......|.|..+ +.+... +....+.+|+.+.|.|.+.+.+ .
T Consensus 84 ~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~ 162 (250)
T 3esu_F 84 EDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQ-SGPELVKPGASVKISCKDSGYAFSS 162 (250)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEE-CCCEEECTTCCEEEEEECCSTTGGG
T ss_pred hhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEec-CCceEEcCCceEEEEEEecCCcccC
Confidence 9999999999886554 223345666542 223333 5567788999999999998866 7
Q ss_pred CeEEEEEC
Q psy6361 119 PDFSWYKD 126 (148)
Q Consensus 119 ~~~~W~~~ 126 (148)
+.+.|||+
T Consensus 163 ~~v~W~k~ 170 (250)
T 3esu_F 163 SWMNWVKQ 170 (250)
T ss_dssp SEEEEEEE
T ss_pred CEEEEEEE
Confidence 89999997
No 109
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.71 E-value=1.3e-16 Score=105.62 Aligned_cols=114 Identities=11% Similarity=0.072 Sum_probs=90.4
Q ss_pred eeeEeeeccceeeeeecccCC-CCcCCCCccEEEEe-eCC--------EEecCCceEEEecCCCCCCE-EEEEEEEeCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNL-PQSRNPGQVIKRYL-KDL--------LYVTRNGSFVINNIAEKDTN-VYTCTVSNAAG 75 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~-p~~~~~~~~~v~W~-~~~--------~~~~~~~~l~i~~~~~~d~g-~y~C~~~~~~~ 75 (148)
...+..|+.+.|.|.+.+ +. | .+.|+ +++ ........|.|.++..+|+| .|+|.+.|..+
T Consensus 100 ~~~~~~g~~v~l~C~~~~-p~~~--------~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~ 170 (290)
T 2o26_X 100 PLFGKEDSDALVRCPLTD-PQVS--------QYSLIECDGKSLPTDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGT 170 (290)
T ss_dssp CEEEETTSCEEECCCBSC-CSCE--------EEEEEETTSCCCCTTCEEEEETTTEEEEESCCGGGTTCEEEEEEEETTE
T ss_pred ceEEecCCeEEEeCcCCC-CCCc--------eEEEEeCCCcCCCCCCceeeCCCCCEEEecccHHHCCCEEEEEEEECCc
Confidence 456678999999999985 44 4 69995 555 22344568999999999999 99999999754
Q ss_pred C-cEEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEeeeecccCCe-EEEEECCEEe
Q psy6361 76 S-TSKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPD-FSWYKDGSLL 130 (148)
Q Consensus 76 ~-~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~-~~W~~~g~~l 130 (148)
. .+..+.|.|. .+|.+... +....+.+|+.+.|.|.+.|.|.|. +.|+++|..+
T Consensus 171 ~~~s~~~~l~V~~~~~~~P~i~~~-~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~ 230 (290)
T 2o26_X 171 WLHSDKFTLKVREAIKAIPVVSVP-ETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQP 230 (290)
T ss_dssp EEECCCEEEEEECCCCSCCEEECS-CSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSE
T ss_pred eEEeEEEEEEEEeCCCCCCccccC-CCcceEecCCcEEEEEEEecCCcceeEEEecCCCCC
Confidence 4 2334677776 67888766 6667888999999999999999996 9999998773
No 110
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.71 E-value=9.4e-17 Score=110.52 Aligned_cols=114 Identities=21% Similarity=0.410 Sum_probs=89.9
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe-----------cCCceEEEe----cCCCCCCEEEEEEEEe
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV-----------TRNGSFVIN----NIAEKDTNVYTCTVSN 72 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~-----------~~~~~l~i~----~~~~~d~g~y~C~~~~ 72 (148)
..+..|+.+.|.|.+.+.+.| .+.|+|++... .....|.|. ++..+|+|.|+|.+.|
T Consensus 27 ~~v~~G~~v~l~C~~~g~p~~--------~v~W~k~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G~Y~C~a~n 98 (404)
T 3p3y_A 27 HIVDPRDNILIECEAKGNPAP--------SFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARN 98 (404)
T ss_dssp CEECSSSCCCCCEEECCSSCC--------EEEEEETTEECCGGGCSSCBCCSSSCCCBCCCTTTCCTTSSCEEEEEEEEC
T ss_pred EEEcCCCCEEEEEEecCCCCC--------eEEEEECCEEeeeecCCcceEecCCceEEEEeccCCCCccCCEEEEEEEEc
Confidence 467789999999999888777 69999998322 134455554 7788999999999999
Q ss_pred CCCCc-EEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeee-ecccCCeEEEEECCEE
Q psy6361 73 AAGST-SKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSH-YGVPTPDFSWYKDGSL 129 (148)
Q Consensus 73 ~~~~~-~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~~~W~~~g~~ 129 (148)
..+.. +..+.|.|...|.+.........+.+|+.+.|.|.+ .+.|.+.+.|++++..
T Consensus 99 ~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~ 157 (404)
T 3p3y_A 99 KFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSME 157 (404)
T ss_dssp SSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSC
T ss_pred CCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCcc
Confidence 88764 466788888777655442455788999999999998 7889999999998743
No 111
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.71 E-value=3.4e-16 Score=101.97 Aligned_cols=115 Identities=16% Similarity=0.203 Sum_probs=90.5
Q ss_pred eeEeeeccceeeeee-cccCCCCcCCCCccEEEEeeCCE---EecCCceEEEecCCCCCCEEEEEEEEeCCCCcEEEEEE
Q psy6361 8 EQAMLLDLIPMHSRY-NYTNLPQSRNPGQVIKRYLKDLL---YVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQM 83 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~-~~~~~p~~~~~~~~~v~W~~~~~---~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l 83 (148)
..+..|+.+.|.|.+ .+.+.+ .+.|++++. .......|.|.++..+|+|.|+|.+.+..+..+..+.|
T Consensus 92 ~~~~~g~~v~l~C~~~~~~p~~--------~v~W~~~g~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l 163 (262)
T 3rjd_A 92 RVFTEGEPLALRCHAWKDKLVY--------NVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISV 163 (262)
T ss_dssp SEEETTSCEEEEEEEGGGCCCE--------EEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEE
T ss_pred eEEecCCeEEEEEEccCCCCCc--------eEEEEECCccccccCCCCeEEEEECChhhCEEEEEEEeCCCCccccceEE
Confidence 456789999999999 444544 799999982 22336789999999999999999999988766777778
Q ss_pred EEec---CCEEEeCCCceEEEecCCcEEEEeeeecccC-C----eEEEEECCEEeec
Q psy6361 84 NVLV---PPFFKDEQQESVAIVVNHPMNISCSHYGVPT-P----DFSWYKDGSLLRI 132 (148)
Q Consensus 84 ~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~-~----~~~W~~~g~~l~~ 132 (148)
.|.. +|.+... + ...+.+|+.+.|.|.+.+.|. | .+.|+++|..+..
T Consensus 164 ~V~~~~~~p~~~~~-~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~ 218 (262)
T 3rjd_A 164 TVKELFPAPVLNAS-V-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRG 218 (262)
T ss_dssp EEECSSCCCEEEES-S-CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEE
T ss_pred EeccCCCCCeEeec-C-ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEecc
Confidence 8873 4555554 3 556889999999999998875 4 3789999998864
No 112
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.70 E-value=8.3e-17 Score=102.47 Aligned_cols=119 Identities=11% Similarity=0.091 Sum_probs=83.8
Q ss_pred eeeeEeeeccceeeeee-cccC-CCCcCCCCccEEEEeeCC-----E--------------------EecCCceEEEecC
Q psy6361 6 NVEQAMLLDLIPMHSRY-NYTN-LPQSRNPGQVIKRYLKDL-----L--------------------YVTRNGSFVINNI 58 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~-~~~~-~p~~~~~~~~~v~W~~~~-----~--------------------~~~~~~~l~i~~~ 58 (148)
....+..|+.+.|.|.+ .+.+ .+ .+.|+|++ . .......|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~v~~~~~~~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 79 (216)
T 2xzc_L 8 PSVSAAPGQKVTISCSGSSSNIGNN--------YVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGL 79 (216)
T ss_dssp SEEEECTTCCEEEEEECCTTTGGGS--------CCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSC
T ss_pred CcEEecCCCeEEEEEEeecCCCCCC--------eEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCC
Confidence 45778999999999995 4432 34 59999842 0 0012237999999
Q ss_pred CCCCCEEEEEEEEeCCCC--cEEEEEEEEe---cCCEEEeCCCceEEEecCCcEEEEeeeec-ccCC-eEEEEECCEEee
Q psy6361 59 AEKDTNVYTCTVSNAAGS--TSKTIQMNVL---VPPFFKDEQQESVAIVVNHPMNISCSHYG-VPTP-DFSWYKDGSLLR 131 (148)
Q Consensus 59 ~~~d~g~y~C~~~~~~~~--~~~~~~l~v~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~-~~~W~~~g~~l~ 131 (148)
+.+|+|.|.|.+.+..+. ......|.|. .+|.+... +......+|+.+.|.|.+.| .|.+ .+.|+|||..+.
T Consensus 80 ~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~-~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~ 158 (216)
T 2xzc_L 80 QTGDEADYYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIF-PPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS 158 (216)
T ss_dssp CGGGCEEEEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEE-CCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred CcccCEEEEEEEEeCCCcceECCCEEEEEcCCCCCCceEEe-CCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecC
Confidence 999999999999997751 2233456665 45666654 22222346889999999988 4554 899999999876
Q ss_pred cC
Q psy6361 132 IQ 133 (148)
Q Consensus 132 ~~ 133 (148)
..
T Consensus 159 ~~ 160 (216)
T 2xzc_L 159 GN 160 (216)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 113
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.70 E-value=1.3e-16 Score=114.00 Aligned_cols=106 Identities=14% Similarity=0.116 Sum_probs=83.3
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec-------CCceEEEecCCCCCCEEEEEEEEeCCCCcEEE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT-------RNGSFVINNIAEKDTNVYTCTVSNAAGSTSKT 80 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~-------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 80 (148)
..+..|+.+.|.|.+.+.|.| .+.|+|++.... ....|.|.++..+|+|.|+|.|.|..+.....
T Consensus 336 ~~v~~G~~v~L~C~~~g~P~p--------~i~W~k~g~~l~~~~~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~ 407 (527)
T 3qs9_E 336 YEIDQYEEFCFSVRFKAYPQI--------RCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKM 407 (527)
T ss_dssp ECCCTTCCCCEEEEEEEESCC--------EEEEEETTEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEE
T ss_pred EEEcCCCeEEEEEEEEecCCC--------EEEEEECCEECcCCcccccCCcEEEEecCCcccCEEEEEEEEeCCCcEEEE
Confidence 567789999999999999988 699999983322 24589999999999999999999999988888
Q ss_pred EEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEe
Q psy6361 81 IQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLL 130 (148)
Q Consensus 81 ~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l 130 (148)
+.|.|..+|.+... +. ...|.|.+.|.|.|.+.|++++...
T Consensus 408 ~~L~V~~~P~i~~~-~~--------~~~l~C~a~g~P~p~i~W~~~~~~~ 448 (527)
T 3qs9_E 408 FTLNIRRKPQVLAE-AS--------ASQASCFSDGYPLPSWTWKKCSDKS 448 (527)
T ss_dssp EEEC--CCCEEEEC-CC--------CE---EEEECSSCCEEEEECCC---
T ss_pred EEEEEecCCeEEEe-CC--------CCEEEEEEEEEcCCeEEEEECCCCc
Confidence 89999999988766 32 2357999999999999999876544
No 114
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.70 E-value=1.5e-16 Score=101.33 Aligned_cols=116 Identities=11% Similarity=0.001 Sum_probs=81.7
Q ss_pred eeeeEeee--ccceeeeeecccCCCCcCCCCccEEEEeeC---CE--------EecCCceEEEecCCCCCCEEEEEEEEe
Q psy6361 6 NVEQAMLL--DLIPMHSRYNYTNLPQSRNPGQVIKRYLKD---LL--------YVTRNGSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 6 ~~~~~~~g--~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~---~~--------~~~~~~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
....+..| +.+.|.|.+.+ +.+ .+.|++. +. .......|.|.+++.+|+|.|+|.+.+
T Consensus 15 ~~v~v~eG~~~~v~L~C~~~~-p~~--------~v~w~~~~~~g~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n 85 (213)
T 2x1w_L 15 GVVYITENKNKTVVIPCLGSI-SNL--------NVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKI 85 (213)
T ss_dssp EEEEECCSTTCEEEECCCBSS-TTC--------CEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC-
T ss_pred eEEEEecCCCccEEEeeccCC-CCc--------EEEEEhhcCCCccccCCCcccccCCccEEEccCChhcCceEEEEEEE
Confidence 56778889 99999999976 445 5999874 31 123346799999999999999999988
Q ss_pred CCCC-cEEEEEEEEec--CCEEEeCCCceEEEecCCcEEEEeeeeccc--CCeEEEEECCEEe
Q psy6361 73 AAGS-TSKTIQMNVLV--PPFFKDEQQESVAIVVNHPMNISCSHYGVP--TPDFSWYKDGSLL 130 (148)
Q Consensus 73 ~~~~-~~~~~~l~v~~--~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p--~~~~~W~~~g~~l 130 (148)
..+. .+..+.|.|.. .|.+....+....+.+|+.+.|.|.+.|.| .+.+.|+++|..+
T Consensus 86 ~~~~~~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~ 148 (213)
T 2x1w_L 86 NDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKH 148 (213)
T ss_dssp ---CEECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSC
T ss_pred CCeeEEEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCcc
Confidence 5443 22235666643 344444313445889999999999998854 4579999988763
No 115
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.70 E-value=3.5e-17 Score=110.39 Aligned_cols=124 Identities=19% Similarity=0.217 Sum_probs=88.1
Q ss_pred eeeeEeeeccceeeeeecccCCCC--cCCCCccEEEEeeCCE---E---ecCCceEEEecCCCCCCE-EEEEEEEeCCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQ--SRNPGQVIKRYLKDLL---Y---VTRNGSFVINNIAEKDTN-VYTCTVSNAAGS 76 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~--~~~~~~~~v~W~~~~~---~---~~~~~~l~i~~~~~~d~g-~y~C~~~~~~~~ 76 (148)
....+..|+.+.|.|.+.+.+.+. ..++ ...+.|+|++. . ......|.|.++..+|+| .|+|.+.|..+.
T Consensus 37 ~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p-~~~v~W~k~~~~~~~~~~~~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~ 115 (329)
T 3oq3_B 37 MNDMAALGEPFSAKCPPIEDSLLSHRYNDK-DNVVNWEKIGKTRRPLNRRVKNGDLWIANYTSNDSHRRYLCTVTTKNGD 115 (329)
T ss_dssp EEEEECTTSCEEECCHHHHCTTTGGGSCCT-TCEEEEEECSSSCEECSTTEETTEEEESSCCGGGGGCCEEEEEECTTSC
T ss_pred ceEEEECCCeEEEEccCCCCccccccccCC-CCeeEEEECCCCccccCceeecceEEEcCCChHhCCCcEEEEEEeCCCc
Confidence 345689999999999998854300 0000 12799999971 1 133678999999999999 999999998876
Q ss_pred cEEEEEEEE-ecCCEEEeCCCceEEEecCCcEEEEeeeeccc-CCeEEEEECCEEee
Q psy6361 77 TSKTIQMNV-LVPPFFKDEQQESVAIVVNHPMNISCSHYGVP-TPDFSWYKDGSLLR 131 (148)
Q Consensus 77 ~~~~~~l~v-~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p-~~~~~W~~~g~~l~ 131 (148)
......+.+ ..+|.+... .....+.+|+.+.|.|.+.|.| .|.+.|+|+|..+.
T Consensus 116 ~~~~~~~~v~~~~p~~~~~-~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~ 171 (329)
T 3oq3_B 116 CVQGIVRSHIRKPPSCIPE-TYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELI 171 (329)
T ss_dssp EEEEEEEEEECCCCSCEEE-EEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECC
T ss_pred eeeEEEEEEEcCCCcEecc-ccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCC
Confidence 333332233 344543333 2223345689999999999999 89999999999985
No 116
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.70 E-value=2.4e-16 Score=104.39 Aligned_cols=115 Identities=16% Similarity=0.159 Sum_probs=92.3
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE----EecCCceEEEecCCCCCCEEEEEEEEeCCCCcEEE
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL----YVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKT 80 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~----~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 80 (148)
.....+..|+.+.|.|.+.+ .+.|++++. ....+..|.|.++..+|+|.|+|.+.| +. ...
T Consensus 19 ~~~~~v~~G~~v~l~C~~~~------------~i~W~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n--g~-~~~ 83 (290)
T 2o26_X 19 QSELIVEAGDTLSLTCIDPD------------FVRWTFKTYFNEMVENKKNEWIQEKAEATRTGTYTCSNSN--GL-TSS 83 (290)
T ss_dssp SSEEEEETTSCEEEEEECTT------------EEEEEEECSSSCEEEECSSEEEETTCCGGGCEEEEEEESS--SC-EEE
T ss_pred CCeEEEcCCCcEEEEECCCC------------cEEEecCCcceeeecCCCceEEEeccCHHhCeEEEEEeeC--Cc-cEE
Confidence 34567889999999999876 389999871 234458999999999999999999998 43 677
Q ss_pred EEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccC-CeEEEE-ECCEEeecCCce
Q psy6361 81 IQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPT-PDFSWY-KDGSLLRIQSHY 136 (148)
Q Consensus 81 ~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~-~~~~W~-~~g~~l~~~~~~ 136 (148)
+.|.|..+|..... +....+.+|+.+.|.|.+.+ |. +.+.|+ +||..+....++
T Consensus 84 ~~l~V~~~~~~~~~-~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~ 139 (290)
T 2o26_X 84 IYVFVRDPAKLFLV-GLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTF 139 (290)
T ss_dssp EEEEEECSSCCBCC-CCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEE
T ss_pred EEEEEeCCCccccc-ccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCce
Confidence 78888877766555 67788889999999999986 76 899995 688888665444
No 117
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.70 E-value=5.1e-17 Score=103.13 Aligned_cols=119 Identities=12% Similarity=0.185 Sum_probs=86.1
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC--E-E----------------------ecCCceEEEecCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL--L-Y----------------------VTRNGSFVINNIAE 60 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~--~-~----------------------~~~~~~l~i~~~~~ 60 (148)
....+..|+.+.|.|.+.+.+.| .+.|+|+. . . ......|.|.+++.
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~--------~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 78 (212)
T 1nfd_E 7 SSASVTVGETVKITCSGDQLPKN--------FAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQP 78 (212)
T ss_dssp SEEEEETTSCCCEEEEETTGGGS--------CCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCG
T ss_pred CeEEEeCCCcEEEEEecCCCCCC--------eEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCc
Confidence 45678999999999998877766 49999842 0 0 01223799999999
Q ss_pred CCCEEEEEEEEeCCCC---cEEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEeeeecc-cC-CeEEEEECCEEee
Q psy6361 61 KDTNVYTCTVSNAAGS---TSKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCSHYGV-PT-PDFSWYKDGSLLR 131 (148)
Q Consensus 61 ~d~g~y~C~~~~~~~~---~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-~~~~W~~~g~~l~ 131 (148)
+|+|.|.|.+.|.... ......+.|. .+|.+... +......+|+.+.|.|.+.|. |. +.+.|++||..+.
T Consensus 79 ~D~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~-~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~ 157 (212)
T 1nfd_E 79 EDEAAYYCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVF-PPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATIN 157 (212)
T ss_dssp GGCSEEEEEEEETTTTEEEECCCEEEEEECCCCBCCEEECC-CCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEEC
T ss_pred ccCEEEEEEEEcccCcccccCCceEEEEccCCCCCCEEEee-CCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcC
Confidence 9999999999973221 1223456663 45666654 333344578999999999887 54 7999999999986
Q ss_pred cC
Q psy6361 132 IQ 133 (148)
Q Consensus 132 ~~ 133 (148)
..
T Consensus 158 ~~ 159 (212)
T 1nfd_E 158 DG 159 (212)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 118
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.70 E-value=3.5e-17 Score=104.43 Aligned_cols=115 Identities=16% Similarity=0.198 Sum_probs=84.8
Q ss_pred eeeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeC--CE-E-----e------------------------cCCce
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKD--LL-Y-----V------------------------TRNGS 52 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~--~~-~-----~------------------------~~~~~ 52 (148)
...+..|+.+.|.|.+.+.+ .+ .+.|+|+ +. . . .....
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~--------~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 80 (219)
T 1c1e_H 9 PELKKPGETVKISCKASGYMFTNY--------GMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAY 80 (219)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGS--------EEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEE
T ss_pred CeEecCCCcEEEEEEEeCcccccc--------eEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEE
Confidence 45788999999999998765 33 6999986 20 0 0 11247
Q ss_pred EEEecCCCCCCEEEEEEEEeCCCC----cEEEEEEEEec----CCEEEeCCCceEEEecCCcEEEEeeeec-ccCC-eEE
Q psy6361 53 FVINNIAEKDTNVYTCTVSNAAGS----TSKTIQMNVLV----PPFFKDEQQESVAIVVNHPMNISCSHYG-VPTP-DFS 122 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~~~~----~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~-~~~ 122 (148)
|.|.+++.+|+|.|.|.+.+..+. ......|.|.. +|.+... ++...+.+|+.+.|.|.+.| .|.| .+.
T Consensus 81 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~~g~~v~L~C~~~g~~P~p~~v~ 159 (219)
T 1c1e_H 81 LQINNLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPL-APGSAAQTNSMVTLGCLVKGYFPEPVTVT 159 (219)
T ss_dssp EEECSCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEE-CCCSSSCCSSEEEEEEEEEEEBSSCCEEE
T ss_pred EEECCCCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEe-cCccccccCCeEEEEEEcccccCCCeEEE
Confidence 999999999999999999987632 12345667664 3555544 33334568999999999988 8988 999
Q ss_pred EEECCEEe
Q psy6361 123 WYKDGSLL 130 (148)
Q Consensus 123 W~~~g~~l 130 (148)
|+++|..+
T Consensus 160 W~~~g~~~ 167 (219)
T 1c1e_H 160 WNSGSLSS 167 (219)
T ss_dssp EGGGTBCT
T ss_pred EEeCCccc
Confidence 99998764
No 119
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.70 E-value=5.6e-18 Score=114.20 Aligned_cols=120 Identities=17% Similarity=0.276 Sum_probs=34.4
Q ss_pred eeeeEeeeccceeeeeecccC-CCCcCCCCccEEEEeeCCE-------EecCCceEEEecCCCCCCEEEEEEEEeCCCCc
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTN-LPQSRNPGQVIKRYLKDLL-------YVTRNGSFVINNIAEKDTNVYTCTVSNAAGST 77 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~-~p~~~~~~~~~v~W~~~~~-------~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 77 (148)
....+..|+.+.|.|.+.+.+ .| .+.|+|++. .......|.|.+++.+|+|.|+|.+.+. +..
T Consensus 16 ~~~~v~~G~~v~l~C~~~~~~p~~--------~v~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~ 86 (334)
T 1ry7_B 16 EQLVFGSGDAVELSCPPPGGGPMG--------PTVWVKDGTGLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLT-QRV 86 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcEEEecCCcEEEEeeCCCCCCCc--------ceEEEECCeeCCCcccEEeccceEEEeecccccCEEEEEEEEeC-CeE
Confidence 456788999999999999874 45 699999872 2224568999999999999999999988 655
Q ss_pred EEEEEEEEecC----------------------CEEEeCC---CceEEEecCCcEEEEeeeecccCCeEEEEECCEEeec
Q psy6361 78 SKTIQMNVLVP----------------------PFFKDEQ---QESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 78 ~~~~~l~v~~~----------------------p~~~~~~---~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~ 132 (148)
...+.|.|... |.+.... .....+.+|+.+.|.|.+.|.|.+.+.|+++|..+..
T Consensus 87 ~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~ 166 (334)
T 1ry7_B 87 LCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRG 166 (334)
T ss_dssp --------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCT
T ss_pred EEEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcc
Confidence 55666666533 2222110 2246788999999999999999999999999988875
Q ss_pred CC
Q psy6361 133 QS 134 (148)
Q Consensus 133 ~~ 134 (148)
..
T Consensus 167 ~~ 168 (334)
T 1ry7_B 167 EH 168 (334)
T ss_dssp TS
T ss_pred cc
Confidence 43
No 120
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.70 E-value=5.2e-17 Score=108.73 Aligned_cols=129 Identities=12% Similarity=0.110 Sum_probs=90.8
Q ss_pred Eeeeccceeeeeec-ccCCCCcCCCCccEEEEeeCC-------EEe-cCC------ceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 10 AMLLDLIPMHSRYN-YTNLPQSRNPGQVIKRYLKDL-------LYV-TRN------GSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 10 ~~~g~~~~l~C~~~-~~~~p~~~~~~~~~v~W~~~~-------~~~-~~~------~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
+..++.+.+.|... +.|.| .+.|++++ ... ... ..|.|......|.|.|+|.+.|..
T Consensus 129 ~~~~~~~~~~C~~~~~~P~~--------~i~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~ 200 (313)
T 4fqp_A 129 LTGEPVPMARCVSTGGRPPA--------QITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHES 200 (313)
T ss_dssp CCSSCEEEEEEEEEEEBSCC--------EEEEEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTT
T ss_pred eecCceEEEEEEccCccCCc--------EEEeecCCccccccceeeeecccccccceeeeecccccccCeeEEEEEEccC
Confidence 34466667889876 44555 79999986 111 111 247888888899999999999987
Q ss_pred CC--cEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCC-eEEEEECCEEeecCCceEEEEEEEEee
Q psy6361 75 GS--TSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTP-DFSWYKDGSLLRIQSHYITFFLFFQRL 146 (148)
Q Consensus 75 ~~--~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~~~W~~~g~~l~~~~~~~~~~l~~~~~ 146 (148)
+. ....+.|.|..+|.+.........+.+|+.+.|.|.+.|.|.| .+.|+++|..+..........|.|..+
T Consensus 201 ~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~~~~~~~L~i~~v 275 (313)
T 4fqp_A 201 FEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFAVAQGAQLLIRPV 275 (313)
T ss_dssp SSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEETTEEEECCC
T ss_pred cCccceeeeecccccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCceEEeCCEEEECcC
Confidence 65 3445566666788876542444556678899999999999998 699999999886544333335665543
No 121
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.70 E-value=1.4e-16 Score=109.34 Aligned_cols=115 Identities=16% Similarity=0.278 Sum_probs=93.3
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEee-CC---------EEecCCceEEEecCCCCC------CEEEEEEEE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLK-DL---------LYVTRNGSFVINNIAEKD------TNVYTCTVS 71 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~-~~---------~~~~~~~~l~i~~~~~~d------~g~y~C~~~ 71 (148)
..+..|+.+.|.|.+.+.|.| .+.|+| ++ .....+..|.|.++..+| +|.|+|.+.
T Consensus 14 ~~~~~G~~v~l~C~~~g~p~p--------~v~W~k~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~~~~~d~G~Y~C~a~ 85 (388)
T 2v5m_A 14 IDFSNSTGAEIECKASGNPMP--------EIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLAR 85 (388)
T ss_dssp EEEETTTCEEEECEEEEESCC--------EEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEEEEEEE
T ss_pred EEEEcCccEEEEEECCCCCCC--------EEEEEcCCCCccccCCCceEEcCCceEEecccChhhccccccCceEEEEEE
Confidence 456679999999999988877 699999 65 223456789999999887 999999999
Q ss_pred eCCCC-cEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccC---CeEEEEECCEEee
Q psy6361 72 NAAGS-TSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPT---PDFSWYKDGSLLR 131 (148)
Q Consensus 72 ~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~---~~~~W~~~g~~l~ 131 (148)
|..+. .+..+.+.+..+|.+... +....+.+|+.+.|.|.+.+.+. +.+.|++++..+.
T Consensus 86 n~~g~~~s~~~~v~v~~~p~~~~~-~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~ 148 (388)
T 2v5m_A 86 NQFGSIISRDVHVRAVVAQYYEAD-VNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENY 148 (388)
T ss_dssp ETTEEEECCCEEEEEECCCCCCCB-CCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEE
T ss_pred ccCCeEEecceEEEEccccccccC-ccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCccc
Confidence 98876 345667777777777766 67788999999999999887653 6899999987764
No 122
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.69 E-value=6.1e-16 Score=95.50 Aligned_cols=109 Identities=18% Similarity=0.212 Sum_probs=81.8
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE--------------------e-cCCceEEEecCCCCCCE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY--------------------V-TRNGSFVINNIAEKDTN 64 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~--------------------~-~~~~~l~i~~~~~~d~g 64 (148)
....+..|+++.|.|.+.. +.+ .+.|++++.. . ..+.+|.|.+++.+|+|
T Consensus 3 ~~v~~~~G~~VtL~c~~~~-~~~--------~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG 73 (171)
T 1ccz_A 3 QQIYGVVYGNVTFHVPSNV-PLK--------EVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDED 73 (171)
T ss_dssp EEEEEETTCCEEECCCCSS-CCS--------CEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCE
T ss_pred cEEEEEcCCCEEEcCCCCC-Ccc--------eEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCc
Confidence 3567899999999999844 555 5999998610 0 14578999999999999
Q ss_pred EEEEEEEeCCCCcEEEEEEEEecC---CEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCC
Q psy6361 65 VYTCTVSNAAGSTSKTIQMNVLVP---PFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQS 134 (148)
Q Consensus 65 ~y~C~~~~~~~~~~~~~~l~v~~~---p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~ 134 (148)
.|.|.+.+..+ ...+.|.|..+ |.+... .....|.|.+.+.|.|.+.|++||..+....
T Consensus 74 ~Y~C~~~n~~~--~~~~~L~V~~~~~~p~i~~~---------~~~~~L~C~~~~~p~p~i~W~~~~~~l~~~~ 135 (171)
T 1ccz_A 74 EYEMESPNITD--TMKFFLYVLEMVSKPMIYWE---------CSNATLTCEVLEGTDVELKLYQGKEHLRSLR 135 (171)
T ss_dssp EEEEECTTCCS--CEEEEEEEECCCCCCEEEEE---------TTTTEEEEECSSCSSCEEEEEETTEEEEEES
T ss_pred eEEEEEeCCCC--cEEEEEEEECcCCCCEEEEe---------cCCcEEEEEeCCCCCcEEEEEECCEECcCCc
Confidence 99999988766 56667777643 333222 1113799999998999999999999886533
No 123
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.69 E-value=9.9e-17 Score=103.99 Aligned_cols=120 Identities=15% Similarity=0.214 Sum_probs=84.6
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC----------------------------EEecCCceEEEe
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL----------------------------LYVTRNGSFVIN 56 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~----------------------------~~~~~~~~l~i~ 56 (148)
.....+..|+.+.|.|.+.+.+.+ .+.|+|.. ........|.|.
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~ 79 (245)
T 3nfj_J 8 PATLVQPVGSPLSLECTVEGTSNP--------NLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSK 79 (245)
T ss_dssp CSEEEEETTCCEEEEEEEESCSSC--------EEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEES
T ss_pred CceEEecCCCCEEEEEEecCCCCc--------eEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEEC
Confidence 345778999999999999987766 69999921 001123479999
Q ss_pred cCCCCCCEEEEEEEEeCCC-----C-cEEEEEEEEec------CCEEEeCCCceEEEecCCcEEEEeeeecc-cCC-eEE
Q psy6361 57 NIAEKDTNVYTCTVSNAAG-----S-TSKTIQMNVLV------PPFFKDEQQESVAIVVNHPMNISCSHYGV-PTP-DFS 122 (148)
Q Consensus 57 ~~~~~d~g~y~C~~~~~~~-----~-~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~-~~~ 122 (148)
+++.+|+|.|.|.+.+..+ . ......|.|.. +|.+....+....+.+|+.+.|.|.+.|. |.+ .+.
T Consensus 80 ~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~ 159 (245)
T 3nfj_J 80 KLLLSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELS 159 (245)
T ss_dssp SCCGGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEE
T ss_pred CCChhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEE
Confidence 9999999999999998322 1 22334666664 55554331222234458999999999885 444 688
Q ss_pred EEECCEEeec
Q psy6361 123 WYKDGSLLRI 132 (148)
Q Consensus 123 W~~~g~~l~~ 132 (148)
|++||..+..
T Consensus 160 W~k~g~~l~~ 169 (245)
T 3nfj_J 160 WWVNGKEVHS 169 (245)
T ss_dssp EEETTEEECT
T ss_pred EEECCEECCC
Confidence 9999999864
No 124
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.69 E-value=2.8e-16 Score=101.47 Aligned_cols=112 Identities=12% Similarity=0.189 Sum_probs=84.2
Q ss_pred eeeeEeeeccceeeeeecccC----CCCcCCCCccEEEEeeCC-----EEe--------------------cCCceEEEe
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTN----LPQSRNPGQVIKRYLKDL-----LYV--------------------TRNGSFVIN 56 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~----~p~~~~~~~~~v~W~~~~-----~~~--------------------~~~~~l~i~ 56 (148)
....+..|+.+.|.|.+.+.+ .| .+.|+|+. ... .....|.|.
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~~~~--------~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 80 (240)
T 1moe_A 9 ASLAVSLGQRATMSCRAGESVDIFGVG--------FLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIID 80 (240)
T ss_dssp SEEEECTTSCEEEEEEESSCCEETTEE--------CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred CeEEecCCCCEEEEEeCCCccccCCCc--------eEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEc
Confidence 356788999999999999887 55 59999952 100 112279999
Q ss_pred cCCCCCCEEEEEEEEeCCCC-cEEEEEEEEecCC------EEEeCCCceEEEecCCcEEEEeeeeccc--CCeEEEEEC
Q psy6361 57 NIAEKDTNVYTCTVSNAAGS-TSKTIQMNVLVPP------FFKDEQQESVAIVVNHPMNISCSHYGVP--TPDFSWYKD 126 (148)
Q Consensus 57 ~~~~~d~g~y~C~~~~~~~~-~~~~~~l~v~~~p------~~~~~~~~~~~~~~g~~~~l~C~~~g~p--~~~~~W~~~ 126 (148)
+++.+|+|.|+|.+.+..+. ......|.|...+ .+... +....+.+|+.+.|.|.+.+.| .+.+.|+|+
T Consensus 81 ~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 158 (240)
T 1moe_A 81 PVEADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQ-SGAELVEPGASVKLSCTASGFNIKDTYMHWVKQ 158 (240)
T ss_dssp SCCGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEE-CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred CCChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeC-CCceEEeCCCcEEEEEEEcCccCCCCEEEEEEE
Confidence 99999999999999987654 3444567776532 23333 5567788999999999998876 468999995
No 125
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.69 E-value=7e-17 Score=102.51 Aligned_cols=120 Identities=18% Similarity=0.227 Sum_probs=82.0
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE-------------------------e-----cCCceEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY-------------------------V-----TRNGSFVI 55 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~-------------------------~-----~~~~~l~i 55 (148)
....+..|+.+.|.|.+.+..... .......+.|+|++.. . ....+|.|
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I 86 (214)
T 2zg1_A 8 KSVTVQEGLCVLVPCSFSYPWRSW-YSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSI 86 (214)
T ss_dssp SEEEEETTCCEEECCEEECCCCCC-SCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEE
T ss_pred cEEEEecCccEEEeeeeecCCccc-CCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEE
Confidence 356888999999999987541000 0000127999997410 0 11237999
Q ss_pred ecCCCCCCEEEEEEEEeCCCCc----EEEEEEEEec---CCEEEeCCCceEEEecCCcEEEEeeeecc----cCCeEEEE
Q psy6361 56 NNIAEKDTNVYTCTVSNAAGST----SKTIQMNVLV---PPFFKDEQQESVAIVVNHPMNISCSHYGV----PTPDFSWY 124 (148)
Q Consensus 56 ~~~~~~d~g~y~C~~~~~~~~~----~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~g~----p~~~~~W~ 124 (148)
.+++.+|+|.|.|.+.+..+.. ...+.|.|.. +|.+... . .+.+|+.+.|.|.+.+. |.|.+.|+
T Consensus 87 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~--~--~~~~G~~v~L~C~~~~~~~~~p~p~v~W~ 162 (214)
T 2zg1_A 87 GDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFL--E--PLESGRPTRLSCSLPGSCEAGPPLTFSWT 162 (214)
T ss_dssp CSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC----C--CCCTTCCEEEEEECTTCCSCSSCCEEEEE
T ss_pred ccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecC--c--cccCCCeEEEEEEeccCCCCCCCceEEEe
Confidence 9999999999999999875321 2356677765 4444332 1 25689999999998764 78999999
Q ss_pred ECCEEe
Q psy6361 125 KDGSLL 130 (148)
Q Consensus 125 ~~g~~l 130 (148)
+++..+
T Consensus 163 ~~~~~~ 168 (214)
T 2zg1_A 163 GNALSP 168 (214)
T ss_dssp SSTTSS
T ss_pred CCCCcc
Confidence 998654
No 126
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.69 E-value=1.5e-16 Score=103.54 Aligned_cols=119 Identities=12% Similarity=0.128 Sum_probs=84.8
Q ss_pred eeeeEeeeccceeeeeecccCC-----CCcCCCCccEEEEeeCC-----E--------------------EecCCceEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNL-----PQSRNPGQVIKRYLKDL-----L--------------------YVTRNGSFVI 55 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~-----p~~~~~~~~~v~W~~~~-----~--------------------~~~~~~~l~i 55 (148)
....+..|+.+.|.|.+.+.+. | .+.|+|++ . .......|.|
T Consensus 46 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~--------~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 117 (254)
T 2c1o_A 46 LTLSVTIGQPASISCKSSQSLLYSNGKT--------YLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKI 117 (254)
T ss_dssp SEEEECTTSCEEEEEEESSCCBCSSSCB--------CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred ceEEecCCCcEEEEeeccCcccccCCCC--------ceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEE
Confidence 3567889999999999988873 4 59999732 0 0012237999
Q ss_pred ecCCCCCCEEEEEEEEeCCCC-cEEEEEEEEec---CCEEEeCCCceEEEecCCcEEEEeeeecc-cC-CeEEEEECCEE
Q psy6361 56 NNIAEKDTNVYTCTVSNAAGS-TSKTIQMNVLV---PPFFKDEQQESVAIVVNHPMNISCSHYGV-PT-PDFSWYKDGSL 129 (148)
Q Consensus 56 ~~~~~~d~g~y~C~~~~~~~~-~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-~~~~W~~~g~~ 129 (148)
.+++.+|+|.|.|.+.+..+. ......+.|.. +|.+... +......+|+.+.|.|.+.|. |. +.+.|+|||..
T Consensus 118 ~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~-~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~ 196 (254)
T 2c1o_A 118 SRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIF-PPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSE 196 (254)
T ss_dssp SSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEE-CCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSE
T ss_pred CcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEee-cCChhhccCCcEEEEEEEecccCCCcEEEEEECCCc
Confidence 999999999999999987553 22233566653 5666654 333333467899999999884 44 46999999998
Q ss_pred eecC
Q psy6361 130 LRIQ 133 (148)
Q Consensus 130 l~~~ 133 (148)
+...
T Consensus 197 l~~~ 200 (254)
T 2c1o_A 197 RQNG 200 (254)
T ss_dssp ECTT
T ss_pred ccCc
Confidence 8654
No 127
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.69 E-value=4.6e-16 Score=101.68 Aligned_cols=113 Identities=15% Similarity=0.167 Sum_probs=81.0
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC---------EEe-----------------------cCCce
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL---------LYV-----------------------TRNGS 52 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~---------~~~-----------------------~~~~~ 52 (148)
.....+..|+.+.|.|.+.+.+.+ .+.|+|.. ... .....
T Consensus 9 p~~~~v~~G~~v~L~C~~~~~~~~--------~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 80 (259)
T 3omz_A 9 TKSVIRQTGSSAEITCDLAEGSTG--------YIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLR 80 (259)
T ss_dssp --CEEEETTCCEEEECCC-----C--------EEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCE
T ss_pred CceeEecCCCcEEEEEEEccCCCc--------EEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEE
Confidence 445788999999999999988766 69999831 111 12346
Q ss_pred EEEecCCCCCCEEEEEEEEeCCC---CcEEEEEEEEec-----------------CCEEEeCCCceEEEecCCcEEEEee
Q psy6361 53 FVINNIAEKDTNVYTCTVSNAAG---STSKTIQMNVLV-----------------PPFFKDEQQESVAIVVNHPMNISCS 112 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~~~---~~~~~~~l~v~~-----------------~p~~~~~~~~~~~~~~g~~~~l~C~ 112 (148)
|.|.+++.+|+|.|+|.+.+..+ .......|.|.. .|.+... +....+.+|+++.|.|.
T Consensus 81 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~-p~~~~v~~G~~v~L~C~ 159 (259)
T 3omz_A 81 MILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQA-QSSVSMPVRKAVTLNCL 159 (259)
T ss_dssp EEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECC-CCCEEEETTCCEEECCE
T ss_pred EEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEe-CCEEEEcCCCCEEEEEE
Confidence 99999999999999999998765 233345666664 2455655 67788999999999999
Q ss_pred eecc-cCCeEEEEEC
Q psy6361 113 HYGV-PTPDFSWYKD 126 (148)
Q Consensus 113 ~~g~-p~~~~~W~~~ 126 (148)
+.+. +.+.+.|||+
T Consensus 160 ~~~~~~~~~v~W~k~ 174 (259)
T 3omz_A 160 YETSWWSYYIFWYKR 174 (259)
T ss_dssp EECCCSSCEEEEEEE
T ss_pred CCCccCCceEEEeee
Confidence 8774 7889999984
No 128
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.69 E-value=9e-16 Score=110.48 Aligned_cols=117 Identities=18% Similarity=0.259 Sum_probs=89.4
Q ss_pred eeeeEeeeccceeeeee-cccCCCCcCCCCccEEEEeeCCE--------------------EecCCceEEEecCCCCCCE
Q psy6361 6 NVEQAMLLDLIPMHSRY-NYTNLPQSRNPGQVIKRYLKDLL--------------------YVTRNGSFVINNIAEKDTN 64 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~-~~~~~p~~~~~~~~~v~W~~~~~--------------------~~~~~~~l~i~~~~~~d~g 64 (148)
....+..|+.+.|.|.+ .+.+.| .+.|+|++. ....+.+|.|.+++.+|+|
T Consensus 374 ~~~~~~~G~~v~L~C~~~~~~~~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G 445 (581)
T 3o3u_N 374 QNITARIGEPLVLKCKGAPKKPPQ--------RLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEG 445 (581)
T ss_dssp EEEEEETTSCEEECCTTCCSSSSC--------EEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCE
T ss_pred cccceecCCcEEEeeeecCCCCCc--------eEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCe
Confidence 34678899999999999 666666 699999741 1223357999999999999
Q ss_pred EEEEEEEeCCCCc-EEEEEEEEecCC---EEEeCCCceEEEecCCcE-EEEeeeec-ccCCeEEEEECCEEeecC
Q psy6361 65 VYTCTVSNAAGST-SKTIQMNVLVPP---FFKDEQQESVAIVVNHPM-NISCSHYG-VPTPDFSWYKDGSLLRIQ 133 (148)
Q Consensus 65 ~y~C~~~~~~~~~-~~~~~l~v~~~p---~~~~~~~~~~~~~~g~~~-~l~C~~~g-~p~~~~~W~~~g~~l~~~ 133 (148)
.|+|.+.+..+.. ...+.|.|..+| .+... ...+.++... .|.|.+.+ .|.|.++|++||+.+...
T Consensus 446 ~Y~C~~~n~~~~~~~~~~~l~V~~~~~~p~i~~~---~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~ 517 (581)
T 3o3u_N 446 IFRCQAMNRNGKETKSNYRVRVYQIPGKPEIVDS---ASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPN 517 (581)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEBCCCCCEEESC---CSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTT
T ss_pred EEEEEEEcCCCceeEEEEEEEEEcCCCCCEEEcC---CcccccCCceeEEEEECCCCCCCCeEEEEECCEECCCC
Confidence 9999999988875 677888887643 33322 3345666554 66999987 599999999999998753
No 129
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.69 E-value=1.1e-17 Score=111.92 Aligned_cols=118 Identities=15% Similarity=0.147 Sum_probs=90.7
Q ss_pred eeeEeeeccceeeeeecccC-CCCcCCCCccEEEEeeCC-----------EEecCCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN-LPQSRNPGQVIKRYLKDL-----------LYVTRNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~-~p~~~~~~~~~v~W~~~~-----------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
...+..|+.+.|.|.+.+.+ .| .+.|+|++ +.......|.|.++..+|+|.|+|.+.|..
T Consensus 14 ~~~v~~G~~v~L~C~~~~~~~~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 85 (315)
T 1itb_B 14 ILVSSANEIDVRPCPLNPNEHKG--------TITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSS 85 (315)
T ss_dssp CCEEETTSCCCCBCCCCSCCCSS--------CCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSS
T ss_pred EEEEcCCCcEEEEeeccCcCCCc--------eEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCc
Confidence 56789999999999999887 44 69999986 112234589999999999999999999887
Q ss_pred CCcEEEEEEEEe-cCCEEEeCC--CceEEEecCCcEEEEeee------ecccCCeEEEEECCEEeec
Q psy6361 75 GSTSKTIQMNVL-VPPFFKDEQ--QESVAIVVNHPMNISCSH------YGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 75 ~~~~~~~~l~v~-~~p~~~~~~--~~~~~~~~g~~~~l~C~~------~g~p~~~~~W~~~g~~l~~ 132 (148)
+.....+.+.+. .+|.+.... .....+.+|+.+.|.|.+ .|.|.+.+.|+++|..+..
T Consensus 86 g~~~~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~ 152 (315)
T 1itb_B 86 YCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLL 152 (315)
T ss_dssp CCCCEECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCC
T ss_pred eEEEEEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCC
Confidence 765555555543 344433220 123567889999999998 8899999999999999854
No 130
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.69 E-value=1e-16 Score=112.02 Aligned_cols=130 Identities=11% Similarity=0.078 Sum_probs=99.2
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEE-----EEeeCCEEe--cCCceEEEecCCCCCCEEEEEEEEeCCCCcE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIK-----RYLKDLLYV--TRNGSFVINNIAEKDTNVYTCTVSNAAGSTS 78 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v-----~W~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 78 (148)
....+..|+.+.|.|.+.+ +.| .+ .|+|++... .....|.|.++.. |+| |+|.+.+..+..+
T Consensus 7 ~~~~v~~G~~v~L~C~~~g-p~p--------~~~~~~~~w~k~~~~~~~~~~~~l~i~~v~~-d~g-Y~C~a~~~~~~~~ 75 (450)
T 1z7z_I 7 SKVILPRGGSVLVTCSTSC-DQP--------MLLGIETPLPKKELLLPGNNRKVYELSNVQE-DSQ-PMCYSNCPDGQST 75 (450)
T ss_dssp SEEEEETTEEEEEEEECCS-SCC--------CEEEECSSSCEEECCSSTTTEEEEEEEEECS-CBC-CEEEEEETTEEEE
T ss_pred CceEEecCCcEEEEEEccC-CCc--------ccccccceeeecceEecCCCceEEEEEeccc-CCe-eEEEEeCCCCcce
Confidence 4567889999999999999 777 36 899886312 2235789999987 999 9999987666667
Q ss_pred EEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCC---eEEEEECCEEeecCC---ceEEEEEEEEee
Q psy6361 79 KTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTP---DFSWYKDGSLLRIQS---HYITFFLFFQRL 146 (148)
Q Consensus 79 ~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~---~~~W~~~g~~l~~~~---~~~~~~l~~~~~ 146 (148)
..+.|.|..+|.+....+....+.+|+.+.|.|.+.+.|.+ .+.|+|||..+.... ......|.|..+
T Consensus 76 ~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~~~~~~~L~i~~~ 149 (450)
T 1z7z_I 76 AKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVR 149 (450)
T ss_dssp EECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEEEEEEECC
T ss_pred eEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccccccceEEEEEee
Confidence 77888888877766432566789999999999999998888 899999999987543 122345666543
No 131
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.69 E-value=1e-15 Score=110.09 Aligned_cols=118 Identities=14% Similarity=0.184 Sum_probs=94.6
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE---------------------e------cCCceEEEecC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY---------------------V------TRNGSFVINNI 58 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~---------------------~------~~~~~l~i~~~ 58 (148)
....+..|+.+.|.|.+.+.+.|. ...+.|+|++.. . .....|.|.++
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~-----~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v 82 (585)
T 2ocw_A 8 EEVNSVEGNSVSITCYYPPTSVNR-----HTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQL 82 (585)
T ss_pred ceeEEecCCcEEEEEeCCCCcCCC-----cccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCC
Confidence 357789999999999998876431 125899998510 0 11236899999
Q ss_pred CCCCCEEEEEEEEeCCCCcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecc-cCCeEEEEECCEE
Q psy6361 59 AEKDTNVYTCTVSNAAGSTSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGV-PTPDFSWYKDGSL 129 (148)
Q Consensus 59 ~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~~~~W~~~g~~ 129 (148)
+.+|+|.|+|.+.+..+..+..+.|.|..+|.+... +....+.+|+.+.|.|.+.+. +.+.+.|+|++..
T Consensus 83 ~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~-~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~ 153 (585)
T 2ocw_A 83 SQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLND-TKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGL 153 (585)
T ss_pred CcccCEEEEEEcccCCCCceEEEEEEEecCccccCC-CccEEEEcCCCEEEEEEecCCCCCccEEEEECCCC
Confidence 999999999999988877778889999999988777 788889999999999999865 4568999998753
No 132
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.69 E-value=4.1e-17 Score=103.52 Aligned_cols=114 Identities=13% Similarity=0.107 Sum_probs=81.7
Q ss_pred EeeeccceeeeeecccC---CCCcCCCCccEEEEeeCCEEec-----------C-----CceEEEecCCCCCCEEEEEEE
Q psy6361 10 AMLLDLIPMHSRYNYTN---LPQSRNPGQVIKRYLKDLLYVT-----------R-----NGSFVINNIAEKDTNVYTCTV 70 (148)
Q Consensus 10 ~~~g~~~~l~C~~~~~~---~p~~~~~~~~~v~W~~~~~~~~-----------~-----~~~l~i~~~~~~d~g~y~C~~ 70 (148)
+..|+.+.|.|.+.+.+ .+. .+.|+|++.... . ...|.|.++..+|+|.|+|.+
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~-------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 87 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEV-------QFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRV 87 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCC-------EEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEE
T ss_pred hccCCceEEEEEEeCcccCCCce-------EEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEE
Confidence 67899999999998774 222 799999872211 0 136888999999999999999
Q ss_pred EeCCCCc--EEEEEE--EEecCCEEEeCCCceEEEecCCcEEEEeeeecc-cC-CeEEEEECCEEee
Q psy6361 71 SNAAGST--SKTIQM--NVLVPPFFKDEQQESVAIVVNHPMNISCSHYGV-PT-PDFSWYKDGSLLR 131 (148)
Q Consensus 71 ~~~~~~~--~~~~~l--~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-~~~~W~~~g~~l~ 131 (148)
.+..+.. ...+.+ .+..+|.+... +......+|+.+.|.|.+.|. |. +.+.|+|||..+.
T Consensus 88 ~~~~~~~~~~~~v~~~~~~~~~P~v~~~-~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 153 (207)
T 2vol_A 88 NSAAFPAPIEKTISKTKGRPKAPQVYTL-PPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAE 153 (207)
T ss_dssp ECTTCSSCEEEEECCCCCCCBCCEEEEE-CCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred EccCCCCceEEEeccCCCCCcCCeEEEe-CCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEecc
Confidence 9987753 233333 33467776554 322222358899999999885 54 3899999999875
No 133
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.68 E-value=7.8e-16 Score=110.73 Aligned_cols=117 Identities=14% Similarity=0.220 Sum_probs=91.6
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEE----EEee--CCE--Eec--------------------CCc--eEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIK----RYLK--DLL--YVT--------------------RNG--SFVI 55 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v----~W~~--~~~--~~~--------------------~~~--~l~i 55 (148)
....+..|+.+.|.|.+.+.+.|. + .|++ ++. ... ... .|.|
T Consensus 339 ~~~~~~~G~~v~l~C~~~~~p~p~--------i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I 410 (585)
T 2ocw_A 339 TVVKGVAGSSVAVLCPYNRKESKS--------IKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVIL 410 (585)
T ss_pred cceEEEeCCcEEEEEecCCCCCcc--------EEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEE
Confidence 345678999999999999888873 4 7998 552 110 112 3999
Q ss_pred ecCCCCCCEEEEEEEEeCCCCcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeee----cccCCeEEEEECCEEee
Q psy6361 56 NNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHY----GVPTPDFSWYKDGSLLR 131 (148)
Q Consensus 56 ~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~----g~p~~~~~W~~~g~~l~ 131 (148)
.++..+|+|.|+|.+ |..+.....+.|.|...|..... +....+.+|+.+.|.|.+. +.|.+.+.|++||..+.
T Consensus 411 ~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~ 488 (585)
T 2ocw_A 411 NQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKV-PGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQAL 488 (585)
T ss_pred CCCChhhCEEEEEcc-cCCCccceeEEEEEecCcccccc-CCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceee
Confidence 999999999999999 87877777788888764443334 5677899999999999986 67888999999998875
Q ss_pred c
Q psy6361 132 I 132 (148)
Q Consensus 132 ~ 132 (148)
.
T Consensus 489 ~ 489 (585)
T 2ocw_A 489 P 489 (585)
T ss_pred e
Confidence 4
No 134
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.68 E-value=7.2e-17 Score=109.01 Aligned_cols=115 Identities=15% Similarity=0.288 Sum_probs=91.2
Q ss_pred eeEeeeccceeeee-----ecccCCCCcCCCCccEEEEeeCCEEe----------cCCceEEEecCCCCCCEEEEEEEEe
Q psy6361 8 EQAMLLDLIPMHSR-----YNYTNLPQSRNPGQVIKRYLKDLLYV----------TRNGSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 8 ~~~~~g~~~~l~C~-----~~~~~~p~~~~~~~~~v~W~~~~~~~----------~~~~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
..+..|+.+.|.|. ..+.+.| .+.|++++... .....|.|.++..+|+|.|+|.+.|
T Consensus 130 ~~~~~g~~v~l~C~~~~~~~~g~p~~--------~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 201 (339)
T 3o4o_C 130 QILTLSTSGVLVCPDLSEFTRDKTDV--------KIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTF 201 (339)
T ss_dssp EEEETTSCEEEECCSCTTTCCSSSCC--------CBCCEESSCBCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEEC
T ss_pred eEEECCCCEEEEecCCcccccCCCCc--------eEEEecCCeeCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEE
Confidence 46788999999999 6666676 59999987211 2235899999999999999999999
Q ss_pred CCCC----cEEEEEEEEec-----CCEEEeCCCceEEEecCCcEEEEeee---eccc-CCeEEEEECCEEee
Q psy6361 73 AAGS----TSKTIQMNVLV-----PPFFKDEQQESVAIVVNHPMNISCSH---YGVP-TPDFSWYKDGSLLR 131 (148)
Q Consensus 73 ~~~~----~~~~~~l~v~~-----~p~~~~~~~~~~~~~~g~~~~l~C~~---~g~p-~~~~~W~~~g~~l~ 131 (148)
..+. .+..+.|.|.. +|.+... +....+.+|+.+.|.|.+ .|.| .+.+.|++||..+.
T Consensus 202 ~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~-~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~ 272 (339)
T 3o4o_C 202 AHEGQQYNITRSIELRIKKKKEETIPVIISP-LKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIE 272 (339)
T ss_dssp CBTTBCCEEEEEEEEEEECCCCCCCCEECCC-SCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSS
T ss_pred CCCCeEEEEEEEEEEEEEcCCCCCCCEEecC-CceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecc
Confidence 8763 45566777763 5566666 666778899999999999 8888 88999999997754
No 135
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.68 E-value=1.6e-15 Score=94.48 Aligned_cols=108 Identities=17% Similarity=0.284 Sum_probs=81.2
Q ss_pred eeeeEeeeccceeeeeecc--cCCCCcCCCCccEEEEee--CCE------------------EecCCceEEEecCCCCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNY--TNLPQSRNPGQVIKRYLK--DLL------------------YVTRNGSFVINNIAEKDT 63 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~--~~~p~~~~~~~~~v~W~~--~~~------------------~~~~~~~l~i~~~~~~d~ 63 (148)
....+.+|+++.|.|.... .+.| .+.|++ ++. ....+.+|.|.+++.+|+
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~--------~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~Ds 78 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDID--------DIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQ 78 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEE--------EEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGC
T ss_pred cEEEEecCCCEEEeCCcccccCcCC--------EEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhC
Confidence 4577889999999996543 3344 699999 641 123456899999999999
Q ss_pred EEEEEEEEeCCCCc--EEEEEEEEecC---CEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEe
Q psy6361 64 NVYTCTVSNAAGST--SKTIQMNVLVP---PFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLL 130 (148)
Q Consensus 64 g~y~C~~~~~~~~~--~~~~~l~v~~~---p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l 130 (148)
|.|.|.+.+..+.. ...+.|.|..+ |.+.. .+..+.|.|.+.+.|.+.+.|++||..+
T Consensus 79 G~Y~c~~~n~~g~~~~~~~~~L~V~~~~~~P~i~~---------~~~~v~L~C~~~~~p~~~~~W~~~g~~l 141 (182)
T 1hnf_A 79 DIYKVSIYDTKGKNVLEKIFDLKIQERVSKPKISW---------TCINTTLTCEVMNGTDPELNLYQDGKHL 141 (182)
T ss_dssp EEEEEEEEETTSCEEEEEEEEEEEECCCCCCEEEE---------ETTTTEEEEECSSCSSCEEEEEESSCEE
T ss_pred EEEEEEEEeCCCceeEEEEEEEEEcCcCCCCEEEE---------ccCcEEEEeEccCCCCCEEEEEECCEEC
Confidence 99999999988764 34556776632 33222 2347999999998889999999999887
No 136
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.68 E-value=6.8e-16 Score=109.82 Aligned_cols=117 Identities=13% Similarity=0.205 Sum_probs=88.6
Q ss_pred eEeeeccceeeeeeccc-CCCCcCCCCccEEEEeeCCEE---------ecCC------ceEEEecCCCCCCEEEEEEEEe
Q psy6361 9 QAMLLDLIPMHSRYNYT-NLPQSRNPGQVIKRYLKDLLY---------VTRN------GSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 9 ~~~~g~~~~l~C~~~~~-~~p~~~~~~~~~v~W~~~~~~---------~~~~------~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
.+..|+.+.|.|.+.+. |.|. .++|++++.. ...+ ..|.|.++..+| |.|+|.+.|
T Consensus 230 ~~~~G~~~~l~C~~~g~~P~p~-------~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n 301 (523)
T 2rcj_C 230 KSTSGGTAALGCLVKDYFPQPV-------TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNH 301 (523)
T ss_pred ccccCCceEEEEEEeceeCCCe-------EEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEe
Confidence 45689999999999887 6563 6999998721 1111 379999999999 999999999
Q ss_pred CCCCcEEEEEEEEecCCEEEeCCCceEE-EecCCcEEEEeeeecccC----CeEEEEECCEEeecC
Q psy6361 73 AAGSTSKTIQMNVLVPPFFKDEQQESVA-IVVNHPMNISCSHYGVPT----PDFSWYKDGSLLRIQ 133 (148)
Q Consensus 73 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~-~~~g~~~~l~C~~~g~p~----~~~~W~~~g~~l~~~ 133 (148)
..+.......+.+...|.+....+.... +.+|+.+.|.|.+.|.|+ +.+.|+|||..+...
T Consensus 302 ~~g~~~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~ 367 (523)
T 2rcj_C 302 KPSNTKVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNA 367 (523)
T ss_pred CCCCcceEEecCCCcCceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCC
Confidence 9988666666666656665443133333 788999999999988653 489999999988644
No 137
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.68 E-value=3.5e-16 Score=101.34 Aligned_cols=118 Identities=18% Similarity=0.247 Sum_probs=81.8
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeC-------------------------C-EEe----cCCceEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKD-------------------------L-LYV----TRNGSFVI 55 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~-------------------------~-~~~----~~~~~l~i 55 (148)
....+..|+.+.|.| ..+.+.+ .+.|+|. + ... .....|.|
T Consensus 10 ~~v~v~~G~~v~L~C-~~~~~~~--------~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I 80 (245)
T 4ei6_B 10 SHQIIDMGQMVTLNC-DPVSNHL--------YFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKI 80 (245)
T ss_dssp SEEEEETTCCEEEEE-ECCTTCC--------EEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEE
T ss_pred ceEEecCCCCEEEEE-EcCCCCC--------EEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEE
Confidence 456789999999999 4455555 6999992 1 000 11337999
Q ss_pred ecCCCCCCEEEEEEEEeCC----CCcEEEEEEEEe------cCCEEEeCCCceEEEecCCcEEEEeeeecc-cCC-eEEE
Q psy6361 56 NNIAEKDTNVYTCTVSNAA----GSTSKTIQMNVL------VPPFFKDEQQESVAIVVNHPMNISCSHYGV-PTP-DFSW 123 (148)
Q Consensus 56 ~~~~~~d~g~y~C~~~~~~----~~~~~~~~l~v~------~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~-~~~W 123 (148)
.+++.+|+|.|.|.+.+.. ........|.|. .+|.+....+....+.+|+.+.|.|.+.|. |.+ .+.|
T Consensus 81 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W 160 (245)
T 4ei6_B 81 QPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSW 160 (245)
T ss_dssp CSCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred CCCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEE
Confidence 9999999999999998532 123334466665 355554331333345568999999999884 545 8999
Q ss_pred EECCEEeec
Q psy6361 124 YKDGSLLRI 132 (148)
Q Consensus 124 ~~~g~~l~~ 132 (148)
++||..+..
T Consensus 161 ~~~g~~l~~ 169 (245)
T 4ei6_B 161 WVNGKEVHS 169 (245)
T ss_dssp EETTEEECT
T ss_pred EECCEECCC
Confidence 999999864
No 138
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.68 E-value=4.5e-16 Score=102.79 Aligned_cols=119 Identities=16% Similarity=0.155 Sum_probs=90.4
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC------EEecCCceEEEecCCCCCCEEEEEEEEeCCCCcEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL------LYVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSK 79 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 79 (148)
....+..|+.+.|.|.+.+ .+.|++++ ........|.|.+++.+|+|.|+|.+.+..+..+.
T Consensus 12 ~~~~v~~G~~v~L~C~~~~------------~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~ 79 (289)
T 3ejj_X 12 PELVVEPGETVTLRCVSNG------------SVEWDGPISPYWTLDPESPGSTLTTRNATFKNTGTYRCTELEDPMAGST 79 (289)
T ss_dssp SEEEECTTCCEEEEEECSS------------CCEEECSCSSSSEECCCSSCCEEEESSCCGGGCEEEEEECCC-----CE
T ss_pred ceEEECCCCCEEEEEEeCC------------cEEEccCCCceEEEeccCCccEEEEeeeccccCEEEEEEEeccCCccee
Confidence 4567889999999999866 27899876 12234578999999999999999999888777777
Q ss_pred EEEEEEecCCE-EEeCCCceEEEecCCcEEEEeeeecccCCe-EEEEE-CCEEeecCCceE
Q psy6361 80 TIQMNVLVPPF-FKDEQQESVAIVVNHPMNISCSHYGVPTPD-FSWYK-DGSLLRIQSHYI 137 (148)
Q Consensus 80 ~~~l~v~~~p~-~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~-~~W~~-~g~~l~~~~~~~ 137 (148)
.+.|.|..+|. +... +....+.+|+.+.|.|.+.+.+.+. +.|++ ++..+....++.
T Consensus 80 ~~~l~V~~~~~~~~~~-~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~ 139 (289)
T 3ejj_X 80 TIHLYVKDPAHSWNLL-AQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYF 139 (289)
T ss_dssp EEEEEECCSSCSEEES-CSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEE
T ss_pred EEEEEEeCCCcceecc-cceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEE
Confidence 88888887665 4555 6778899999999999998877665 99986 777776554443
No 139
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.68 E-value=4.8e-16 Score=100.82 Aligned_cols=115 Identities=10% Similarity=0.138 Sum_probs=84.8
Q ss_pred eeeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeCC--------------------------E--Ee----cCCce
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDL--------------------------L--YV----TRNGS 52 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~--------------------------~--~~----~~~~~ 52 (148)
...+..|+.+.|.|.+.+.+ .+ .+.|+|+. + .. .....
T Consensus 11 ~~~v~~G~~v~L~C~~~g~p~~~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 82 (247)
T 2ghw_B 11 GGVVQPGKSLRLSCAASGFAFSSY--------AMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLY 82 (247)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGS--------CEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEE
T ss_pred CEEEecCCcEEEEEEeccccCCCc--------eEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEE
Confidence 46788999999999999876 34 59999831 0 00 11236
Q ss_pred EEEecCCCCCCEEEEEEEEeCCCC--cEEEEEEEEecC---------------CEEEeCCCceEEEecCCcEEEEeeeec
Q psy6361 53 FVINNIAEKDTNVYTCTVSNAAGS--TSKTIQMNVLVP---------------PFFKDEQQESVAIVVNHPMNISCSHYG 115 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~~~~--~~~~~~l~v~~~---------------p~~~~~~~~~~~~~~g~~~~l~C~~~g 115 (148)
|.|.+++.+|+|.|.|.+.+..+. ......|.|... +.+... +....+.+|+.+.|.|.+.+
T Consensus 83 L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~~ 161 (247)
T 2ghw_B 83 LQMNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQS-PATLSLSPGERATLSCRASQ 161 (247)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEE-CSEEEECTTSCEEEEEEESS
T ss_pred EEECcCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEcc-CCEEEecCCCcEEEEEEeCC
Confidence 999999999999999999987321 223346777643 334444 55677889999999999999
Q ss_pred ccCCeEEEEE--CCEEe
Q psy6361 116 VPTPDFSWYK--DGSLL 130 (148)
Q Consensus 116 ~p~~~~~W~~--~g~~l 130 (148)
.|.+.+.|+| +|..+
T Consensus 162 ~~~~~v~W~k~~~g~~~ 178 (247)
T 2ghw_B 162 SVRSNLAWYQQKPGQAP 178 (247)
T ss_dssp CCTTCEEEEEECTTSCC
T ss_pred CccceEEEEEECCCCCc
Confidence 9888999999 55543
No 140
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.68 E-value=2.6e-16 Score=102.53 Aligned_cols=118 Identities=13% Similarity=0.117 Sum_probs=84.0
Q ss_pred eeeEeeeccceeeeeecccC-----CCCcCCCCccEEEEeeCC-----E--------------------EecCCceEEEe
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN-----LPQSRNPGQVIKRYLKDL-----L--------------------YVTRNGSFVIN 56 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~-----~p~~~~~~~~~v~W~~~~-----~--------------------~~~~~~~l~i~ 56 (148)
...+..|+.+.|.|.+.+.+ .+ .+.|+|++ . .......|.|.
T Consensus 43 ~~~v~~G~~v~L~C~~~~~~~~~~~~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 114 (252)
T 3bkj_L 43 SLPVNLGEQASISCRSSQSIVHSNGHT--------YLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRIS 114 (252)
T ss_dssp EEEECTTSCEEEEEEESSCCBCTTSCB--------CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred eEEEeCCCcEEEEEEcCCCccccCCCC--------cEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEEC
Confidence 45688999999999998876 34 59999843 0 00112379999
Q ss_pred cCCCCCCEEEEEEEEeCCCC-cEEEEEEEEec---CCEEEeCCCceEEEecCCcEEEEeeeecc-cCC-eEEEEECCEEe
Q psy6361 57 NIAEKDTNVYTCTVSNAAGS-TSKTIQMNVLV---PPFFKDEQQESVAIVVNHPMNISCSHYGV-PTP-DFSWYKDGSLL 130 (148)
Q Consensus 57 ~~~~~d~g~y~C~~~~~~~~-~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~-~~~W~~~g~~l 130 (148)
+++.+|+|.|.|.+.+..+. ......|.|.. +|.+... +......+|+.+.|.|.+.|. |.+ .+.|+|||..+
T Consensus 115 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~-~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~ 193 (252)
T 3bkj_L 115 RVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIF-PPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER 193 (252)
T ss_dssp SCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEE-CCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred CCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEe-CCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeec
Confidence 99999999999999886543 22234566653 5666654 332233478899999999884 543 79999999987
Q ss_pred ecC
Q psy6361 131 RIQ 133 (148)
Q Consensus 131 ~~~ 133 (148)
...
T Consensus 194 ~~~ 196 (252)
T 3bkj_L 194 QNG 196 (252)
T ss_dssp CSS
T ss_pred CCC
Confidence 543
No 141
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.68 E-value=5.1e-16 Score=101.31 Aligned_cols=110 Identities=10% Similarity=0.194 Sum_probs=83.6
Q ss_pred eeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeCC-----EEe---------------------------cCCceE
Q psy6361 8 EQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDL-----LYV---------------------------TRNGSF 53 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~-----~~~---------------------------~~~~~l 53 (148)
..+..|+.+.|.|.+.+.+ .+ .+.||+.. ... .....|
T Consensus 12 ~~v~~G~~v~L~C~~~~~~~~~~--------~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 83 (256)
T 3umt_A 12 ELVKPGASVKISCKTSGYTFTEY--------TMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYL 83 (256)
T ss_dssp EEECTTCCEEEEEEEESSCGGGS--------CEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEE
T ss_pred eEEcCCCCEEEEEEEeccccccc--------EEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEE
Confidence 4588999999999998755 34 59998742 100 112349
Q ss_pred EEecCCCCCCEEEEEEEEeC----CCCcEEEEEEEEec----------------CCEEEeCCCceEEEecCCcEEEEeee
Q psy6361 54 VINNIAEKDTNVYTCTVSNA----AGSTSKTIQMNVLV----------------PPFFKDEQQESVAIVVNHPMNISCSH 113 (148)
Q Consensus 54 ~i~~~~~~d~g~y~C~~~~~----~~~~~~~~~l~v~~----------------~p~~~~~~~~~~~~~~g~~~~l~C~~ 113 (148)
.|.+++.+|+|.|.|.+.+. .........|.|.. +|.+... +....+.+|+++.|.|.+
T Consensus 84 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~v~~G~~v~L~C~~ 162 (256)
T 3umt_A 84 ELRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQS-PSSLSASLGERVSITCRA 162 (256)
T ss_dssp EECSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEE-CSEEEECTTCCEEEEEEE
T ss_pred EECCCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcC-CCeEEEECCCCEEEEEEE
Confidence 99999999999999999886 22233445677763 5666666 677889999999999999
Q ss_pred ecccCCeEEEEEC
Q psy6361 114 YGVPTPDFSWYKD 126 (148)
Q Consensus 114 ~g~p~~~~~W~~~ 126 (148)
.+.+.+.+.|||+
T Consensus 163 ~~~~~~~v~W~k~ 175 (256)
T 3umt_A 163 SQDIGSNLNWLQQ 175 (256)
T ss_dssp SSCCTTCEEEEEE
T ss_pred ecCCCcEEEEEEE
Confidence 9988889999984
No 142
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.68 E-value=5.7e-17 Score=103.66 Aligned_cols=115 Identities=14% Similarity=0.182 Sum_probs=81.0
Q ss_pred EeeeccceeeeeecccC--CCCcCCCCccEEEEeeCCEEec----------------CCceEEEecCCCCCCEEEEEEEE
Q psy6361 10 AMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDLLYVT----------------RNGSFVINNIAEKDTNVYTCTVS 71 (148)
Q Consensus 10 ~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~~~~~----------------~~~~l~i~~~~~~d~g~y~C~~~ 71 (148)
+..|+.+.|.|.+.+.+ .+. +.+.|+|++.... ....|.|.++..+|+|.|+|.+.
T Consensus 23 v~~G~~v~L~C~~~g~~~~p~~------~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~ 96 (218)
T 2rgs_A 23 LMISLTPKVTCVVVDVSEDDPD------VQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVN 96 (218)
T ss_dssp HCTTSCCEEEEEEEEECTTSCC------EEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEE
T ss_pred hccCCCeeEEEEEcCCccCCCc------eEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEE
Confidence 67899999999998764 220 1799999972211 12358889999999999999999
Q ss_pred eCCCCc--EEEEEE--EEecCCEEEeCCCceEEEecCCcEEEEeeeec-ccCC-eEEEEECCEEee
Q psy6361 72 NAAGST--SKTIQM--NVLVPPFFKDEQQESVAIVVNHPMNISCSHYG-VPTP-DFSWYKDGSLLR 131 (148)
Q Consensus 72 ~~~~~~--~~~~~l--~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~-~~~W~~~g~~l~ 131 (148)
+..+.. ...+.+ .+..+|.+... +......+|+.+.|.|.+.| .|.+ .+.|++||..+.
T Consensus 97 ~~~~~~~~~~~v~~~~~~~~~P~v~~~-~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~ 161 (218)
T 2rgs_A 97 NKDLPSPIERTISKIKGLVRAPQVYIL-PPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEE 161 (218)
T ss_dssp ETTCSSCEEEEECCCCCCCBCCEEEEE-CCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred CCcCCCcceEEEeecCCCCCCCEEEEE-CCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEecc
Confidence 987643 222221 33456766544 22222235889999999998 5665 899999999874
No 143
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.67 E-value=7.6e-16 Score=99.30 Aligned_cols=112 Identities=14% Similarity=0.210 Sum_probs=82.4
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC--------------------------EEe---cCCceEEEe
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL--------------------------LYV---TRNGSFVIN 56 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~--------------------------~~~---~~~~~l~i~ 56 (148)
....+..|+.+.|.|. .+.+.| .+.|+|+. ... .....|.|.
T Consensus 8 ~~~~v~~G~~v~L~C~-~~~~~~--------~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 78 (238)
T 2p1y_A 8 RNKVAVTGGKVTLSCN-QTNNHN--------NMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILE 78 (238)
T ss_dssp SEEEEETTCCEEEEEE-ECSCCS--------EEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEES
T ss_pred cceEEeCCCEEEEEee-cCCCCc--------cEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEe
Confidence 4567899999999999 565655 69999951 011 123479999
Q ss_pred cCCCCCCEEEEEEEEeCCCC-----cEEEEEEEEecCC------------EEEeCCCceEEEecCCcEEEEeeeecccCC
Q psy6361 57 NIAEKDTNVYTCTVSNAAGS-----TSKTIQMNVLVPP------------FFKDEQQESVAIVVNHPMNISCSHYGVPTP 119 (148)
Q Consensus 57 ~~~~~d~g~y~C~~~~~~~~-----~~~~~~l~v~~~p------------~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~ 119 (148)
+++.+|+|.|.|.+.+..+. ......|.|...+ .+... +....+.+|+.+.|.|.+.+.|.+
T Consensus 79 ~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~-p~~~~v~~G~~v~L~C~~~~~p~~ 157 (238)
T 2p1y_A 79 LATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQS-PQSLTVWEGETAILNCSYENSAFD 157 (238)
T ss_dssp SCCGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEE-CSEEEEETTSCEEEEEECCCTTCC
T ss_pred cCCcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEcc-CceEEEeCCCeEEEEEEEecCCCC
Confidence 99999999999999987542 1123466665433 44544 667789999999999999999999
Q ss_pred eEEEEECC
Q psy6361 120 DFSWYKDG 127 (148)
Q Consensus 120 ~~~W~~~g 127 (148)
.+.|+|++
T Consensus 158 ~i~W~k~~ 165 (238)
T 2p1y_A 158 YFPWYQQF 165 (238)
T ss_dssp EEEEEEEC
T ss_pred cEEEEEEC
Confidence 99999863
No 144
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.67 E-value=5.7e-16 Score=98.14 Aligned_cols=109 Identities=11% Similarity=0.153 Sum_probs=75.4
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe----cCCceEEEecCCCCCCEEEEEEEEeCCCCcEEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV----TRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTI 81 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~----~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 81 (148)
....+..|+.+.|.|.+ +.| .+.|+|++... .....|.|.+++.+|+|.|+|.+.+... ..+
T Consensus 11 ~~~~~~~G~~v~L~C~~---p~~--------~i~W~k~g~~l~~~~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s---~~~ 76 (204)
T 1sy6_A 11 KVYDYQEDGSVLLTCDA---EAK--------NITWFKDGKMIGFLTEDKKKWNLGSNAKDPRGMYQCKGSQNKS---KPL 76 (204)
T ss_dssp EECCCCSSSEEEEEECS---CSS--------EEEEEETTEEEEEEESSCCCEEEEEGGGCCEEEEEEESSSSCC---CCE
T ss_pred eEEeecCCCeEEEEEcC---CCC--------EEEEEECCEECCCCCCCCCeEEeCCCCcCCCEEEEEEecCCCC---eeE
Confidence 34445689999999998 444 69999998332 3567899999999999999999644222 123
Q ss_pred EEEEec-------------------------------CCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEe
Q psy6361 82 QMNVLV-------------------------------PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLL 130 (148)
Q Consensus 82 ~l~v~~-------------------------------~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l 130 (148)
.+.+.. .+.+.. .+.....+|+.+.|.|. +.|.|.+.|++||..+
T Consensus 77 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l 152 (204)
T 1sy6_A 77 QVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQ--TPYKVSISGTTVILTCP--QYPGSEILWQHNDKNI 152 (204)
T ss_dssp EEEEEC------------------------------------C--CCCEEEEETTEEEEECS--CCCSSCEEEEETTEEE
T ss_pred EEEEEEeccccccccccccccccccccccccccccccccceec--CCceeeecCCcEEEEcC--CCCCCceEEEECCEEC
Confidence 333320 111221 12222338999999999 7888999999999988
Q ss_pred ec
Q psy6361 131 RI 132 (148)
Q Consensus 131 ~~ 132 (148)
..
T Consensus 153 ~~ 154 (204)
T 1sy6_A 153 GG 154 (204)
T ss_dssp SC
T ss_pred CC
Confidence 65
No 145
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.67 E-value=1.8e-16 Score=105.83 Aligned_cols=119 Identities=16% Similarity=0.197 Sum_probs=86.7
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC----E-----------E--------------ecCCceEEEec
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL----L-----------Y--------------VTRNGSFVINN 57 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~----~-----------~--------------~~~~~~l~i~~ 57 (148)
...+..|+.+.|.|.+.+.+.+. .+.|+|++ . . .....+|.|.+
T Consensus 8 ~vtv~~G~~v~L~C~v~~~~~~~-------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~ 80 (308)
T 4fom_A 8 HVTAVWGKNVSLKCLIEVNETIT-------QISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHN 80 (308)
T ss_dssp SCEEETTSCEEECCBCCCSSCEE-------EEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECS
T ss_pred EeEEEcCCcEEEEEEecCCCCCc-------EEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEcc
Confidence 35688999999999987655443 69999853 0 0 01235799999
Q ss_pred CCCCCCEEEEEEEEeCC-CCcEEEEEEEEecCCEEEeCC-CceEEEecCCcEEEEeee-ecccCCeEEEEECCEEeec
Q psy6361 58 IAEKDTNVYTCTVSNAA-GSTSKTIQMNVLVPPFFKDEQ-QESVAIVVNHPMNISCSH-YGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 58 ~~~~d~g~y~C~~~~~~-~~~~~~~~l~v~~~p~~~~~~-~~~~~~~~g~~~~l~C~~-~g~p~~~~~W~~~g~~l~~ 132 (148)
++.+|+|.|+|.+.+.. +.......+.+...|...... +.......|+.+.+.|.+ .|.|.+.+.|++++..+..
T Consensus 81 v~~~D~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~ 158 (308)
T 4fom_A 81 IGFSDSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMES 158 (308)
T ss_dssp CCGGGCEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCE
T ss_pred CCHHHCEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCccccc
Confidence 99999999999998864 445566677777666544321 333444567789999985 7899999999999987753
No 146
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.67 E-value=5.2e-16 Score=101.46 Aligned_cols=115 Identities=14% Similarity=0.181 Sum_probs=88.1
Q ss_pred eeeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeCC---EE------------------------e-----cCCce
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDL---LY------------------------V-----TRNGS 52 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~---~~------------------------~-----~~~~~ 52 (148)
...+..|+.+.|.|.+.+.+ .+ .+.|+|++ .. . .....
T Consensus 9 ~~~v~~G~~v~L~C~~~g~~~~~~--------~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 80 (256)
T 1nqb_A 9 AELVKPGASVKLSCKASGYTFTSY--------WMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAY 80 (256)
T ss_dssp CEEECTTCCEEEEEEECSSCGGGS--------CEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEE
T ss_pred CeeecCCCcEEEEEEeccccCCCc--------eEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEE
Confidence 46788999999999998765 34 59999841 00 0 01237
Q ss_pred EEEecCCCCCCEEEEEEEEeCCCC-----cEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCC-----eEE
Q psy6361 53 FVINNIAEKDTNVYTCTVSNAAGS-----TSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTP-----DFS 122 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~~~~-----~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-----~~~ 122 (148)
|.|.+++.+|+|.|.|.+.+..+. ......|.|..+|.+... +....+.+|+.+.|.|.+.+.|.+ .+.
T Consensus 81 L~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~ 159 (256)
T 1nqb_A 81 MQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQT-PLSLPVSLGDQASISCRSSQSIVHSNGNTYLE 159 (256)
T ss_dssp EEECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEE-CSEEEECTTCCEEEEEEESSCCBCTTSCBCEE
T ss_pred EEECcCChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEec-CcEEEEecCCcEEEEeEecCcccccccceEEE
Confidence 999999999999999999987552 223467778777777666 677789999999999999888765 999
Q ss_pred EEE--CCEEe
Q psy6361 123 WYK--DGSLL 130 (148)
Q Consensus 123 W~~--~g~~l 130 (148)
|+| +|..+
T Consensus 160 W~k~~~g~~~ 169 (256)
T 1nqb_A 160 WYLQKPGQSP 169 (256)
T ss_dssp EEEECTTSCE
T ss_pred EEEECCCCCc
Confidence 999 66544
No 147
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.67 E-value=1e-15 Score=99.48 Aligned_cols=111 Identities=13% Similarity=0.129 Sum_probs=83.8
Q ss_pred eEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe----------cCCceEEEecCCCCCCEEEEEEEEeCCCC--
Q psy6361 9 QAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV----------TRNGSFVINNIAEKDTNVYTCTVSNAAGS-- 76 (148)
Q Consensus 9 ~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~----------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~-- 76 (148)
.+..|+.++|.|.+.+. .+ .+.|+|++... .....|.|.+++.+|+|.|+|.+.+..+.
T Consensus 17 ~v~~G~~VtL~C~~~~~-~~--------~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~ 87 (242)
T 1p6f_A 17 MVPKEKQVTICCQGNYG-AV--------EYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSE 87 (242)
T ss_dssp EEETTCCEEEEEECCTT-CC--------EEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEETTEECC
T ss_pred ccCCCCcEEEEEeeCCC-Cc--------EEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecCCcccc
Confidence 67889999999998643 22 69999998322 23457999999999999999999875432
Q ss_pred cEEEEEEEEec---CCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEee
Q psy6361 77 TSKTIQMNVLV---PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLR 131 (148)
Q Consensus 77 ~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~ 131 (148)
.+..+.|.|.. +|.+... + ...+.+|+.+.|.|.+.+. .+.+.|+|+|..+.
T Consensus 88 ~S~~~~L~V~~~~~~P~i~~~-p-~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~ 142 (242)
T 1p6f_A 88 PSNLLDLVVTEMYDTPTLSVH-P-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSH 142 (242)
T ss_dssp CCCCEEEEEECCSCCCEEEEE-S-CSEEETTCEEEEEEECTTS-CSEEEEEECSSSCE
T ss_pred CCcceEEEeecccCCCceEcc-C-CCccCCCCcEEEEEecCCC-CCEEEEEECCCccC
Confidence 34456666663 6666654 4 3468899999999998764 46999999997765
No 148
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.67 E-value=3.3e-15 Score=92.89 Aligned_cols=111 Identities=14% Similarity=0.156 Sum_probs=80.8
Q ss_pred ceeeeEeeeccceeeeeeccc-CCCCcCCCCccEEEEeeC-C----------------------EEe-cCCceEEEecCC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYT-NLPQSRNPGQVIKRYLKD-L----------------------LYV-TRNGSFVINNIA 59 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~-~~p~~~~~~~~~v~W~~~-~----------------------~~~-~~~~~l~i~~~~ 59 (148)
+....+..|+++.|.|.+... +.+ .+.|+|. + ... ..+.+|.|.+++
T Consensus 6 ~~~v~v~~G~~vtL~c~~~~~~~~~--------~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~ 77 (180)
T 2dru_A 6 VPNVNAITGSNVTLTILKHPLASYQ--------RLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVS 77 (180)
T ss_dssp CCEEEEETTSCEEECCCSSCCCSCS--------EEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCC
T ss_pred cceEEEEeCCCEEEeCCCCCCCcee--------EEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCC
Confidence 456789999999999998542 233 6999994 2 001 244679999999
Q ss_pred CCCCEEEEEEEEeCCCCcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeee-ecccCCeEEEEECCEEee
Q psy6361 60 EKDTNVYTCTVSNAAGSTSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSH-YGVPTPDFSWYKDGSLLR 131 (148)
Q Consensus 60 ~~d~g~y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~~~W~~~g~~l~ 131 (148)
.+|+|.|.|.+.+.. .....+.|.|..++.. +.....+..+.|.|.+ .| |.|.+.|+++|..+.
T Consensus 78 ~~D~G~Y~C~v~~~~-~~~~~~~L~V~~~~~~------P~i~~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~ 142 (180)
T 2dru_A 78 KEDRGDYYMRMLHET-EDQWKITMEVYEMVSK------PMIYWECSNATLTCEVLEG-TDVELKLYQGKEHLR 142 (180)
T ss_dssp GGGCEEEEEEEESSS-EEEEEEEEEEECCCCC------CEEEEEGGGTEEEEECSSC-TTCEEEEEETTEEEE
T ss_pred HHHCeEEEEEEEcCC-eEEEEEEEEEECCCCC------CEEEecCCCEEEEEEeCCC-CCCEEEEEECCeECc
Confidence 999999999998765 4556667777643211 1111234669999999 66 899999999999875
No 149
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.66 E-value=9.7e-17 Score=110.22 Aligned_cols=111 Identities=16% Similarity=0.185 Sum_probs=85.7
Q ss_pred eeeeEeeeccceeeeeecc-cCCCCcCCCCccEEEEeeCCE----------EecCCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNY-TNLPQSRNPGQVIKRYLKDLL----------YVTRNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~-~~~p~~~~~~~~~v~W~~~~~----------~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
....+..|+.+.|.|.+.+ .+.+ .+.|+|++. .......|.|.++..+|+|.|+|.+.|..
T Consensus 14 ~~~~v~~G~~v~l~C~~~~~~p~~--------~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~ 85 (395)
T 1bih_A 14 AEVLFRENNPTVLECIIEGNDQGV--------KYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFAETPA 85 (395)
T ss_dssp SEEEEETTSCEEECCCEESCCSSC--------EEEEEESSSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEEEEETT
T ss_pred CceEEeCCCEEEEEEEEecCCCCc--------eEEEEECCcCcccccceEEEecCCceEEEecCCCCCCcEEEEEEEeCC
Confidence 4567889999999999998 5555 799999871 23345689999999999999999999987
Q ss_pred CCcE-EEEEEEEe--cCCEEEeCCCceEEEecCCcEEEEeee-ecccCCeEEEEECC
Q psy6361 75 GSTS-KTIQMNVL--VPPFFKDEQQESVAIVVNHPMNISCSH-YGVPTPDFSWYKDG 127 (148)
Q Consensus 75 ~~~~-~~~~l~v~--~~p~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~~~W~~~g 127 (148)
+... ..+.+.+. ..|.+ . +....+.+|+.+.|.|.+ .+.|.+.+.|++++
T Consensus 86 g~~~s~~~~l~v~~~~~p~~--~-~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~ 139 (395)
T 1bih_A 86 GVASSRVISFRKTYLIASPA--K-THEKTPIEGRPFQLDCVLPNAYPKPLITWKKRL 139 (395)
T ss_dssp EEEECCCEEEEEEEEECCCC--E-EEEECCBTTEEEEECCCCCEEESCCEEEEEEEE
T ss_pred CeEEeEEEEEEEEEeecCCc--C-CcceeeeeCCcEEEEecCCCCCCCCeEEEEecC
Confidence 6532 33445444 33333 2 345667799999999995 88899999999986
No 150
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.66 E-value=4.2e-16 Score=89.15 Aligned_cols=76 Identities=18% Similarity=0.228 Sum_probs=62.9
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe-----------cCCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV-----------TRNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~-----------~~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
.+..+..|+.+.|.|.+.+.|.| .+.|+|++... .....|.|.++..+|+|.|+|.+.|..
T Consensus 21 ~~~~v~~G~~~~l~C~~~G~P~p--------~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~ 92 (107)
T 3knb_B 21 RPVRVVSGAEAELKCVVLGEPPP--------VVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAA 92 (107)
T ss_dssp CCEEEETTSCEEEEEEEEEESCC--------EEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CcEEEeCCCcEEEEEEEEEecCC--------EEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEECC
Confidence 45678899999999999999998 69999998222 123479999999999999999999999
Q ss_pred CCcEEEEEEEEecCC
Q psy6361 75 GSTSKTIQMNVLVPP 89 (148)
Q Consensus 75 ~~~~~~~~l~v~~~p 89 (148)
|..+..+.|.|..+|
T Consensus 93 G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 93 GEAYAAAAVTVLEPP 107 (107)
T ss_dssp EEEEEEEEEEEEC--
T ss_pred CEEEEEEEEEEEcCC
Confidence 988888888887665
No 151
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.66 E-value=4.4e-16 Score=100.65 Aligned_cols=118 Identities=13% Similarity=0.171 Sum_probs=82.0
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-------------------------E-E---ecCCceEEEe
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-------------------------L-Y---VTRNGSFVIN 56 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-------------------------~-~---~~~~~~l~i~ 56 (148)
....+..|+.+.|.|.+.+ +.+ .+.|+|.. . . ......|.|.
T Consensus 10 ~~v~v~~G~~v~L~C~~~~-~~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 80 (240)
T 3q5y_A 10 RHIIKEKGGRSVLTCIPIS-GHS--------NVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMS 80 (240)
T ss_dssp SEEEEETTCCEEEEEECCT-TCC--------EEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEEC
T ss_pred ceeeecCCCcEEEEEEeCC-CCc--------eEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEEC
Confidence 3567899999999999865 444 69999921 0 0 1123479999
Q ss_pred cCCCCCCEEEEEEEEeC--CC-CcEEEEEEEEe------cCCEEEeCCCceEEEecCCcEEEEeeeec-ccCC-eEEEEE
Q psy6361 57 NIAEKDTNVYTCTVSNA--AG-STSKTIQMNVL------VPPFFKDEQQESVAIVVNHPMNISCSHYG-VPTP-DFSWYK 125 (148)
Q Consensus 57 ~~~~~d~g~y~C~~~~~--~~-~~~~~~~l~v~------~~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~-~~~W~~ 125 (148)
+++.+|+|.|.|.+.+. .. .......|.|. .+|.+....+....+.+|+.+.|.|.+.| .|.+ .+.|++
T Consensus 81 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~ 160 (240)
T 3q5y_A 81 ALELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWV 160 (240)
T ss_dssp SCCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred cCChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEE
Confidence 99999999999999832 11 12333456665 34555433133334556889999999988 5656 789999
Q ss_pred CCEEeec
Q psy6361 126 DGSLLRI 132 (148)
Q Consensus 126 ~g~~l~~ 132 (148)
||..+..
T Consensus 161 ~g~~l~~ 167 (240)
T 3q5y_A 161 NGKEVHS 167 (240)
T ss_dssp TTEEECT
T ss_pred CCEECcC
Confidence 9999864
No 152
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.66 E-value=4.6e-17 Score=104.73 Aligned_cols=118 Identities=13% Similarity=0.129 Sum_probs=66.5
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EE-e-------------------cCCceEEEecCCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LY-V-------------------TRNGSFVINNIAEK 61 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~-~-------------------~~~~~l~i~~~~~~ 61 (148)
...+..|+.+.|.|.+.+.+.+ .+.|+|++ .. . .....|.|.+++.+
T Consensus 32 ~~~v~~G~~v~L~C~~~~~~~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 103 (233)
T 3bqu_C 32 SLSMSIGEKVTIRCITSTDIDD--------DMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSE 103 (233)
T ss_dssp BC-------CCEEEEEEEEESS--------CEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CC
T ss_pred eEEEecCCCEEEEEecCCcCCC--------eEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHH
Confidence 3458899999999999887766 49999842 00 0 01126999999999
Q ss_pred CCEEEEEEEEeCCCC-cEEEEEEEEec---CCEEEeCCCceEEEecCCcEEEEeeeecc-cCC-eEEEEECCEEeecC
Q psy6361 62 DTNVYTCTVSNAAGS-TSKTIQMNVLV---PPFFKDEQQESVAIVVNHPMNISCSHYGV-PTP-DFSWYKDGSLLRIQ 133 (148)
Q Consensus 62 d~g~y~C~~~~~~~~-~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~-~~~W~~~g~~l~~~ 133 (148)
|+|.|.|.+.+..+. ......|.|.. +|.+... +......+|+.+.|.|.+.|. |.+ .+.|+|||..+...
T Consensus 104 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~-~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~ 180 (233)
T 3bqu_C 104 DVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIF-PPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNG 180 (233)
T ss_dssp CCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEE-CCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CC
T ss_pred HCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEe-CCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCC
Confidence 999999999886543 22223455543 5666654 332233478999999999885 443 79999999887543
No 153
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.66 E-value=2.5e-15 Score=97.41 Aligned_cols=112 Identities=12% Similarity=0.094 Sum_probs=80.0
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EE--------------------ecCCceEEEecCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LY--------------------VTRNGSFVINNIAE 60 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~--------------------~~~~~~l~i~~~~~ 60 (148)
....+..|+.+.|.|.+.+.+.| .+.|+|+. .. ......|.|.+++.
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 80 (242)
T 2znx_A 9 ATLSVTPGNSVSLSCRASQSIGN--------NLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVET 80 (242)
T ss_dssp SEEEECTTCCEEEEEEESSCCTT--------CEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCG
T ss_pred CeEEEcCCCcEEEEEEeCCCCCc--------eEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCCh
Confidence 34678899999999999988766 59999842 10 01124799999999
Q ss_pred CCCEEEEEEEEeCCCC-cEEEEEEEEecCCE-------------EEeCCCceEEEecCCcEEEEeeeeccc--CCeEEEE
Q psy6361 61 KDTNVYTCTVSNAAGS-TSKTIQMNVLVPPF-------------FKDEQQESVAIVVNHPMNISCSHYGVP--TPDFSWY 124 (148)
Q Consensus 61 ~d~g~y~C~~~~~~~~-~~~~~~l~v~~~p~-------------~~~~~~~~~~~~~g~~~~l~C~~~g~p--~~~~~W~ 124 (148)
+|+|.|.|.+.+..+. ......|.|..+|. .... +....+.+|+.+.|.|.+.+.+ .+.+.|+
T Consensus 81 ~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~ 159 (242)
T 2znx_A 81 EDFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQE-SGPSLVKPSQTLSLTCSVTGDSITSDYXSXI 159 (242)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEE-ECCSEECTTSCEEEEEEEESSCGGGSCEEEE
T ss_pred HHCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeec-CCcceecCCCeEEEEEEEEccccCCcceeeE
Confidence 9999999999887543 22345677765442 2222 3334688999999999998865 5789999
Q ss_pred EC
Q psy6361 125 KD 126 (148)
Q Consensus 125 ~~ 126 (148)
|+
T Consensus 160 k~ 161 (242)
T 2znx_A 160 RK 161 (242)
T ss_dssp EE
T ss_pred ee
Confidence 84
No 154
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.66 E-value=3.8e-16 Score=108.70 Aligned_cols=123 Identities=14% Similarity=0.161 Sum_probs=87.7
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E--------------------EecCCceEEEecCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L--------------------YVTRNGSFVINNIAE 60 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~--------------------~~~~~~~l~i~~~~~ 60 (148)
....+..|+.+.|.|.+.+.+.|. ....+.|+|++ . .......|.|.+++.
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~----~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 84 (438)
T 1qgc_4 9 ASLAVSLGQRATISCRASESVDSS----GHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEA 84 (438)
T ss_dssp SEEEECTTSCEEEEEEESSCCEET----TEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCG
T ss_pred CeEEeeCCCCEEEEEecCCCcccC----CcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcC
Confidence 356788999999999998877530 00159999952 0 011234799999999
Q ss_pred CCCEEEEEEEEeCCCC-cEEEEEEEEe---cCCEEEeCCCceEEEecCCcEEEEeeeec-ccCC-eEEEEECCEEeecC
Q psy6361 61 KDTNVYTCTVSNAAGS-TSKTIQMNVL---VPPFFKDEQQESVAIVVNHPMNISCSHYG-VPTP-DFSWYKDGSLLRIQ 133 (148)
Q Consensus 61 ~d~g~y~C~~~~~~~~-~~~~~~l~v~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~-~~~W~~~g~~l~~~ 133 (148)
+|+|.|+|.+.+..+. ......|.|. .+|.+... +......+|..+.|.|.+.| .|.+ .+.|+|||..+...
T Consensus 85 ~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~-~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~ 162 (438)
T 1qgc_4 85 DDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIF-PPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNG 162 (438)
T ss_dssp GGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEE-CCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTT
T ss_pred cCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEec-CCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCC
Confidence 9999999999987754 2334556665 36666654 33333346889999999977 6777 89999999988654
No 155
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.66 E-value=1.1e-15 Score=108.79 Aligned_cols=114 Identities=11% Similarity=0.139 Sum_probs=90.9
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEee-CC--------EEecCCceEEEecCCCCCCE-EEEEEEEeCCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLK-DL--------LYVTRNGSFVINNIAEKDTN-VYTCTVSNAAGS 76 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~-~~--------~~~~~~~~l~i~~~~~~d~g-~y~C~~~~~~~~ 76 (148)
...+..|+.+.|.|.+.+.+.+ .+.|++ ++ ........|.|.++..+|+| .|+|.+.|..+.
T Consensus 123 ~~~v~~G~~v~l~C~~~~~~~~--------~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~ 194 (524)
T 2ec8_A 123 SLYGKEDNDTLVRCPLTDPEVT--------NYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKS 194 (524)
T ss_dssp CCCEETTSCEEECCCBSCCCCS--------CEEEECSSSCCCCSSCEEEEETTTEEEEESCCGGGTTCEEEEEEC----C
T ss_pred ceEEEcCCeEEEECcCCCCccc--------eEEEEccCCcCcCCCCceeECCCccEEEeccchhhCCceEEEEEEECCce
Confidence 4567889999999999886645 699988 55 22244678999999999999 999999987665
Q ss_pred c-EEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEeeeecccCCe-EEEEECCEE
Q psy6361 77 T-SKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPD-FSWYKDGSL 129 (148)
Q Consensus 77 ~-~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~-~~W~~~g~~ 129 (148)
. +..+.|.|. .+|.+... +....+.+|+.+.|.|.+.+.|.|. +.|++++..
T Consensus 195 ~~s~~~~l~V~~~~~~~p~i~~~-~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~ 252 (524)
T 2ec8_A 195 VLSEKFILKVRPAFKAVPVVSVS-KASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQ 252 (524)
T ss_dssp CCCCCEECCEECCCCSCCEEECS-CSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCS
T ss_pred EEEEEEEEEEEeCCCCCCcEEec-CCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCC
Confidence 3 446677775 67888877 7778899999999999999998886 999999987
No 156
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.66 E-value=2.5e-16 Score=100.61 Aligned_cols=117 Identities=21% Similarity=0.298 Sum_probs=86.4
Q ss_pred eeeeEeeeccceeeeeecccC-CCCcCCCCccEEEEeeCCE----------------------E-------ecCCceEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTN-LPQSRNPGQVIKRYLKDLL----------------------Y-------VTRNGSFVI 55 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~-~p~~~~~~~~~v~W~~~~~----------------------~-------~~~~~~l~i 55 (148)
....+..|+.+.|.|.+.+.. .+. ....+.|+|++. . ......|.|
T Consensus 7 ~~v~~~~G~~v~L~C~~~~~~~~~~----~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I 82 (221)
T 3eow_R 7 TQVPGFLGDSVTLPCYLQVPNMEVT----HVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRM 82 (221)
T ss_dssp CCCCCCCSSCCEEECCCCCCSSSCC----CEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEEC
T ss_pred CcEEEEeCCCEEEEeeeccCCCCCc----cceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEE
Confidence 346788999999999996532 220 012599999851 0 113558999
Q ss_pred ecCCCCCCEEEEEEEEeCC-CCcEEEEEEEEecCCEEEeCCCceEEEecCCcE-EEEeeee-cccCCeEEEEECCE
Q psy6361 56 NNIAEKDTNVYTCTVSNAA-GSTSKTIQMNVLVPPFFKDEQQESVAIVVNHPM-NISCSHY-GVPTPDFSWYKDGS 128 (148)
Q Consensus 56 ~~~~~~d~g~y~C~~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~-~l~C~~~-g~p~~~~~W~~~g~ 128 (148)
.+++.+|+|.|+|.+.+.. +.....+.|.|..+|.+... +.... .+|+.+ .|.|.+. +.|.|.++|++++.
T Consensus 83 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~-~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~ 156 (221)
T 3eow_R 83 FGLRVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAE-VQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLG 156 (221)
T ss_dssp CCSSCCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEE-EECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSS
T ss_pred ccCChHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceee-cCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCC
Confidence 9999999999999999876 66777778888888887754 32222 678888 5999976 88999999998743
No 157
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.66 E-value=2.7e-15 Score=97.92 Aligned_cols=112 Identities=11% Similarity=0.145 Sum_probs=83.6
Q ss_pred ceeeeEeeeccceeeeeeccc--CCCCcCCCCccEEEEeeCC---------EEe-----------------------cCC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYT--NLPQSRNPGQVIKRYLKDL---------LYV-----------------------TRN 50 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~--~~p~~~~~~~~~v~W~~~~---------~~~-----------------------~~~ 50 (148)
.....+..|+.+.|.|.+.+. +.+ .+.|+|.. ... ...
T Consensus 13 ~~~~~v~~G~~v~L~C~~~~~~~~~~--------~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 13 SGAEVKKPGASVKVSCQASGYRFSHF--------TVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGS--------CEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred cCCceecCCCeEEEEEEeecccccCc--------eEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 345778899999999999884 344 59999732 000 012
Q ss_pred ceEEEecCCCCCCEEEEEEEEeC------------CCCcEEEEEEEEec---------------CCEEEeCCCceEEEec
Q psy6361 51 GSFVINNIAEKDTNVYTCTVSNA------------AGSTSKTIQMNVLV---------------PPFFKDEQQESVAIVV 103 (148)
Q Consensus 51 ~~l~i~~~~~~d~g~y~C~~~~~------------~~~~~~~~~l~v~~---------------~p~~~~~~~~~~~~~~ 103 (148)
..|.|.+++.+|+|.|.|.+.+. .........|.|.. +|.+... +....+.+
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~ 163 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQA-PGTLSLSP 163 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEE-CSEEEECT
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEec-CCeEEEeC
Confidence 35999999999999999999886 22233445677765 3445555 77788999
Q ss_pred CCcEEEEeeeecccC-CeEEEEE
Q psy6361 104 NHPMNISCSHYGVPT-PDFSWYK 125 (148)
Q Consensus 104 g~~~~l~C~~~g~p~-~~~~W~~ 125 (148)
|+++.|.|.+.+.+. +.+.|||
T Consensus 164 G~~v~L~C~~~~~~~~~~v~W~k 186 (256)
T 3juy_B 164 GERATFSCRSSHSIRSRRVAWYQ 186 (256)
T ss_dssp TSCEEEEEEESSCCTTCCEEEEE
T ss_pred CCCEEEEEEECCCcCCeeEEEEE
Confidence 999999999988776 8999998
No 158
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.66 E-value=1.9e-15 Score=98.51 Aligned_cols=110 Identities=13% Similarity=0.219 Sum_probs=79.4
Q ss_pred eeeEeeeccceeeeeeccc--CCCCcCCCCccEEEEeeCC-----EE--------------------ecCCceEEEecCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYT--NLPQSRNPGQVIKRYLKDL-----LY--------------------VTRNGSFVINNIA 59 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~--~~p~~~~~~~~~v~W~~~~-----~~--------------------~~~~~~l~i~~~~ 59 (148)
...+..|+.+.|.|.+.+. +.+ .+.|+|.. .. ......|.|.+++
T Consensus 11 ~~~v~~G~~v~L~C~~~~~~~~~~--------~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 82 (256)
T 3ux9_B 11 SVSGAPGQRVTISCSGSSSNIGSN--------YVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQ 82 (256)
T ss_dssp EEEECTTCCEEEEEECCTTTTTTS--------CCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCC
T ss_pred cEEEcCCCcEEEEEecCCCCCCCc--------eEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCC
Confidence 4678899999999999886 444 59999842 10 0112369999999
Q ss_pred CCCCEEEEEEEEeCCCC---cEEEEEEEEecCC---------------------EEEeCCCceEEEecCCcEEEEeeeec
Q psy6361 60 EKDTNVYTCTVSNAAGS---TSKTIQMNVLVPP---------------------FFKDEQQESVAIVVNHPMNISCSHYG 115 (148)
Q Consensus 60 ~~d~g~y~C~~~~~~~~---~~~~~~l~v~~~p---------------------~~~~~~~~~~~~~~g~~~~l~C~~~g 115 (148)
.+|+|.|+|.+.+..+. ......|.|...+ .+.. +....+.+|+.+.|.|.+.+
T Consensus 83 ~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~G~~v~L~C~~~~ 160 (256)
T 3ux9_B 83 SEDEADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVE--SGGGLVQPGGSLRLSCAASG 160 (256)
T ss_dssp GGGCEEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEE--ECCEEECTTCCEEEEEEEES
T ss_pred hhhCEEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEc--CCCeEEcCCCeEEEEEEEeC
Confidence 99999999999986542 2234567776543 2222 33456889999999999988
Q ss_pred cc--CCeEEEEEC
Q psy6361 116 VP--TPDFSWYKD 126 (148)
Q Consensus 116 ~p--~~~~~W~~~ 126 (148)
.+ .+.+.|||+
T Consensus 161 ~~~~~~~v~W~r~ 173 (256)
T 3ux9_B 161 FTFSSYAMSWVRQ 173 (256)
T ss_dssp SCGGGSEEEEEEE
T ss_pred CcccccEEEEEEE
Confidence 66 789999986
No 159
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.66 E-value=1.4e-15 Score=99.26 Aligned_cols=111 Identities=15% Similarity=0.265 Sum_probs=84.2
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E----E-----------------e--cCCceEEEe
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L----Y-----------------V--TRNGSFVIN 56 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~----~-----------------~--~~~~~l~i~ 56 (148)
.....+..|+.+.|.|.+.+.+.| .+.|+|.. . . . .....|.|.
T Consensus 10 p~~~~v~~G~~v~L~C~~~~~~~~--------~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~ 81 (256)
T 3tf7_C 10 DARVTVSEGASLQLRCKYSYSATP--------YLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKA 81 (256)
T ss_dssp CSEEEEETTSCEEECCEEECSSCC--------EEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEES
T ss_pred CceEEecCCCeEEEEEEeCCCCCc--------eEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEEC
Confidence 345788999999999999988776 69999832 0 0 0 123469999
Q ss_pred cCCCCCCEEEEEEEEeCCCC----cEEEEEEEEec--------------------CCEEEeCCCceEEEecCCcEEEEee
Q psy6361 57 NIAEKDTNVYTCTVSNAAGS----TSKTIQMNVLV--------------------PPFFKDEQQESVAIVVNHPMNISCS 112 (148)
Q Consensus 57 ~~~~~d~g~y~C~~~~~~~~----~~~~~~l~v~~--------------------~p~~~~~~~~~~~~~~g~~~~l~C~ 112 (148)
+++.+|+|.|+|.+.+..+. ......|.|.. +|.+... +....+.+|+.+.|.|.
T Consensus 82 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-p~~~~v~~G~~v~L~C~ 160 (256)
T 3tf7_C 82 SVHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQS-PRNKVTVTGENVTLSCR 160 (256)
T ss_dssp SCCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEES-CSEEEEETTCCEEECEE
T ss_pred CCCcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEec-CCEEEEeCCCcEEEEEE
Confidence 99999999999999987542 22234566654 4566666 77788889999999999
Q ss_pred eecccCCeEEEEE
Q psy6361 113 HYGVPTPDFSWYK 125 (148)
Q Consensus 113 ~~g~p~~~~~W~~ 125 (148)
+.+. .+.+.|||
T Consensus 161 ~~~~-~~~v~W~k 172 (256)
T 3tf7_C 161 QTNS-HNYMYWYR 172 (256)
T ss_dssp ECSC-CSEEEEEE
T ss_pred cCCC-ceEEEEEE
Confidence 9876 67999998
No 160
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.66 E-value=5.5e-16 Score=103.76 Aligned_cols=123 Identities=20% Similarity=0.220 Sum_probs=91.0
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE-------------Ee----------------cCCceEEEe
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL-------------YV----------------TRNGSFVIN 56 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~-------------~~----------------~~~~~l~i~ 56 (148)
....+..|+.+.|.|.+.+.+.+.. ....+.|+|++. .. ..+.+|.|.
T Consensus 8 ~~v~~~~G~~v~L~C~v~~~~~~~~---~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~ 84 (313)
T 4fqp_A 8 TQVPGFLGDSVTLPCYLQVPNMEVT---HVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMF 84 (313)
T ss_dssp SEECCBTTSCEEECCEEECCTTSCC---CCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEEC
T ss_pred CEEEEecCCCEEEEEEEECCCCCcc---ceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEEC
Confidence 3567889999999999988776521 011489999750 00 122469999
Q ss_pred cCCCCCCEEEEEEEEeC-CCCcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeee-ecccCCeEEEEECCEEeec
Q psy6361 57 NIAEKDTNVYTCTVSNA-AGSTSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSH-YGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 57 ~~~~~d~g~y~C~~~~~-~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~~~W~~~g~~l~~ 132 (148)
+++.+|+|.|+|.+.+. .+..+..+.|.+...|.+... .....+..+..+.+.|.+ .+.|.+.+.|++++..+..
T Consensus 85 ~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~-~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~ 161 (313)
T 4fqp_A 85 GLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAE-VQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPN 161 (313)
T ss_dssp SCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEE-ECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEE
T ss_pred cCChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceec-ccceEeecCceEEEEEEccCccCCcEEEeecCCccccc
Confidence 99999999999988654 344566677777788877766 555566677888889986 5789999999999887653
No 161
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.66 E-value=1.4e-15 Score=99.64 Aligned_cols=113 Identities=10% Similarity=0.141 Sum_probs=83.7
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE---E---------ecCCceEEEecCCCCCCEEEEEEEEeCC-
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL---Y---------VTRNGSFVINNIAEKDTNVYTCTVSNAA- 74 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~---~---------~~~~~~l~i~~~~~~d~g~y~C~~~~~~- 74 (148)
..+..|++++|.|.+.. +.+ .+.|+|++. . ......|.|.+++.+|+|.|+|.+.+..
T Consensus 16 ~~V~~G~~VtL~C~~~~-~~~--------~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~ 86 (257)
T 1b6u_A 16 PLVKSEETVILQCWSDV-RFQ--------HFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHS 86 (257)
T ss_dssp SEEESSCCEEEEEEESS-CCS--------EEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEECSSC
T ss_pred CEecCCCCEEEEEecCC-CCc--------EEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEeccCC
Confidence 56789999999999864 333 699999871 1 0124579999999999999999998642
Q ss_pred ----CCcEEEEEEEEec---CCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeec
Q psy6361 75 ----GSTSKTIQMNVLV---PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 75 ----~~~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~ 132 (148)
...+..+.|.|.. +|.+... +. ..+.+|+++.|.|.+.+.+ +.+.|+|||..+..
T Consensus 87 ~~~~s~~S~~~~L~V~~~~~~P~l~~~-p~-~~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~ 148 (257)
T 1b6u_A 87 PYQLSAPSDPLDIVITGLYEKPSLSAQ-PG-PTVLAGESVTLSCSSRSSY-DMYHLSREGEAHER 148 (257)
T ss_dssp TTSCCCCCCCEEEEEECSSCCCEEECS-SC-TTCBTTCEEEEEEECSSCC-SEEEEEETTSSCEE
T ss_pred CccccccCCCEEEecccCCCCcceEcc-CC-CccCCCCEEEEEEeCCCCC-cEEEEEECCcccCc
Confidence 1234556677763 4666654 43 3578999999999987764 68999999987754
No 162
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.65 E-value=3.3e-16 Score=100.14 Aligned_cols=115 Identities=12% Similarity=0.141 Sum_probs=83.3
Q ss_pred eeeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeCC-----EEe-----------------------------cCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDL-----LYV-----------------------------TRN 50 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~-----~~~-----------------------------~~~ 50 (148)
...+..|+.+.|.|.+.+.+ .+ .+.|+|+. ... ...
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~--------~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 80 (222)
T 1q9r_B 9 GGLVQSGGSLRLSCATSGFTFTDY--------YMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSI 80 (222)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGS--------CEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTE
T ss_pred ceeEcCCCEEEEEEEecCccCCCC--------cEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCe
Confidence 45788999999999998764 34 59999842 000 012
Q ss_pred ceEEEecCCCCCCEEEEEEEEeCCC-----CcEEEEEEEEec----CCEEEeCCCceEEEecCCcEEEEeeeecc-cCC-
Q psy6361 51 GSFVINNIAEKDTNVYTCTVSNAAG-----STSKTIQMNVLV----PPFFKDEQQESVAIVVNHPMNISCSHYGV-PTP- 119 (148)
Q Consensus 51 ~~l~i~~~~~~d~g~y~C~~~~~~~-----~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~- 119 (148)
..|.|.+++.+|+|.|.|.+.+..+ .......|.|.. +|.+... +....+.+|+.+.|.|.+.|. |.|
T Consensus 81 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~~g~~v~L~C~~~g~~P~p~ 159 (222)
T 1q9r_B 81 LYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPL-APGSAAQTNSMVTLGCLVKGYFPEPV 159 (222)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEE-CCCSCCCCSSEEEEEEEEEEEBSSCC
T ss_pred EEEEECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEc-cccccccCCCcEEEEEEEccEECCCC
Confidence 3799999999999999999988653 222345666653 4555544 322335679999999999885 888
Q ss_pred eEEEEECCEEe
Q psy6361 120 DFSWYKDGSLL 130 (148)
Q Consensus 120 ~~~W~~~g~~l 130 (148)
.+.|+++|..+
T Consensus 160 ~v~W~~~g~~~ 170 (222)
T 1q9r_B 160 TVTWNSGSLSS 170 (222)
T ss_dssp EEEEGGGTBCT
T ss_pred EEEEecCCeEc
Confidence 99999998765
No 163
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.65 E-value=1.4e-15 Score=99.31 Aligned_cols=111 Identities=9% Similarity=0.214 Sum_probs=80.9
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EEe--------------------------cCCceEEEe
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LYV--------------------------TRNGSFVIN 56 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~~--------------------------~~~~~l~i~ 56 (148)
..+..|+.+.|.|.+.+.+.+. ..+.|+|.. ... .....|.|.
T Consensus 18 ~~v~~G~~v~L~C~~~~~~~~~------~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 91 (257)
T 3gkz_A 18 SLVKPSQTLSLTCSVTGDSVTS------GYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLK 91 (257)
T ss_dssp SEECTTCCEEEEEEEEESCCSS------CEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred eEEcCCCcEEEEEEEEcccccc------eEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEEC
Confidence 4578899999999998854221 169999832 100 112269999
Q ss_pred cCCCCCCEEEEEEEEeCCCC----cEEEEEEEEecC--------------CEEEeCCCceEEEecCCcEEEEeeeecccC
Q psy6361 57 NIAEKDTNVYTCTVSNAAGS----TSKTIQMNVLVP--------------PFFKDEQQESVAIVVNHPMNISCSHYGVPT 118 (148)
Q Consensus 57 ~~~~~d~g~y~C~~~~~~~~----~~~~~~l~v~~~--------------p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~ 118 (148)
+++.+|+|.|.|.+.+..+. ......|.|... |.+... +....+.+|+++.|.|.+.+.+.
T Consensus 92 ~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~-p~~~~v~~G~~v~L~C~~~~~~~ 170 (257)
T 3gkz_A 92 SVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQS-PAIMSASPGEKVTLTCSASSSVS 170 (257)
T ss_dssp SCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECS-CSEEEECTTCCEEEEEEESSCCC
T ss_pred CCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcC-CceEEEeCCCcEEEEEEEccCcc
Confidence 99999999999999986211 223456666643 455555 66788999999999999998887
Q ss_pred C-eEEEEE
Q psy6361 119 P-DFSWYK 125 (148)
Q Consensus 119 ~-~~~W~~ 125 (148)
+ .+.|||
T Consensus 171 ~~~v~W~k 178 (257)
T 3gkz_A 171 SSHLYWYQ 178 (257)
T ss_dssp GGGEEEEE
T ss_pred ceEEEEEE
Confidence 7 899998
No 164
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.65 E-value=1e-17 Score=123.71 Aligned_cols=120 Identities=18% Similarity=0.265 Sum_probs=0.0
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe----------------------------c---CCceEEEe
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV----------------------------T---RNGSFVIN 56 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~----------------------------~---~~~~l~i~ 56 (148)
..+..|+.+.|.|.+.+.+.| .+.|+|++... . ....|.|.
T Consensus 559 ~~~~~G~~v~l~C~~~~~p~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 630 (772)
T 3v2a_R 559 MQPTEQESVSLWCTADRSTFE--------NLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELK 630 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCCceEEEEeccCCCCC--------CcEEEEcCCcccccccCcccccccccccceeeccceeeecCCCceEEEEEC
Confidence 356789999999999988877 59999986110 0 01249999
Q ss_pred cCCCCCCEEEEEEEEeCCCCc--EEEEEEEE--ecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeec
Q psy6361 57 NIAEKDTNVYTCTVSNAAGST--SKTIQMNV--LVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 57 ~~~~~d~g~y~C~~~~~~~~~--~~~~~l~v--~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~ 132 (148)
++..+|+|.|+|.+.|..+.. .....+.| ..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+|||..+..
T Consensus 631 ~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~-~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~ 709 (772)
T 3v2a_R 631 NASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGN-LENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVE 709 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEeecC-CCceEEeCCCCEEEEEEeCccCCCeEEEEECCeECcC
Confidence 999999999999999965432 22334444 567888776 6677888999999999999999999999999999876
Q ss_pred CCce
Q psy6361 133 QSHY 136 (148)
Q Consensus 133 ~~~~ 136 (148)
..++
T Consensus 710 ~~~~ 713 (772)
T 3v2a_R 710 DSGI 713 (772)
T ss_dssp ----
T ss_pred CCCe
Confidence 5443
No 165
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.65 E-value=3.2e-15 Score=102.37 Aligned_cols=117 Identities=15% Similarity=0.175 Sum_probs=87.2
Q ss_pred eeeEeeeccceeeeeecc-cCCCCcCCCCccEEEEeeCC----------E-EecCCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 7 VEQAMLLDLIPMHSRYNY-TNLPQSRNPGQVIKRYLKDL----------L-YVTRNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~-~~~p~~~~~~~~~v~W~~~~----------~-~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
...+..|+.+.|.|.+.. .+.+ .+.|++++ . .......|.|.++..+|+|.|+|.+.+..
T Consensus 110 ~~~v~~G~~v~l~C~~~~~~p~~--------~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 181 (382)
T 1cs6_A 110 PVKITEGWGVMFTCSPPPHYPAL--------SYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHI 181 (382)
T ss_dssp CEEEETTSCEEECCCCCSEESCC--------EEEEEESSTTCBCCCCSSEEECTTTCCEEESSCCGGGCEEEEEEEEEEE
T ss_pred ceEEecCCcEEEEeCCCCCCCCc--------EEEEEECCCccccccCceEEEecCceEEEEEeeCcccCeeEEEEEEEcc
Confidence 456788999999999643 3444 79999986 1 12234689999999999999999999876
Q ss_pred CCcE-----EEEEEEEe------cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEee
Q psy6361 75 GSTS-----KTIQMNVL------VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLR 131 (148)
Q Consensus 75 ~~~~-----~~~~l~v~------~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~ 131 (148)
+... ....+.+. .+|.+....+....+.+|+.+.|.|.+.|.|.+.+.|++++..+.
T Consensus 182 g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~ 249 (382)
T 1cs6_A 182 DFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQT 249 (382)
T ss_dssp TTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCS
T ss_pred ccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCcccc
Confidence 4322 12344433 245555432557788999999999999999999999999887654
No 166
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.65 E-value=1.3e-15 Score=99.51 Aligned_cols=115 Identities=12% Similarity=0.149 Sum_probs=83.5
Q ss_pred eeeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeCC-----EE---------------------e-----cCCceE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDL-----LY---------------------V-----TRNGSF 53 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~-----~~---------------------~-----~~~~~l 53 (148)
...+..|+.+.|.|.+.+.+ .| .+.|+|++ .. . .....|
T Consensus 9 ~~~v~~G~~v~L~C~~~g~p~~~~--------~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 80 (257)
T 1f3r_B 9 PGLVRPSETLSLTCTVSGFSLTSF--------SVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFL 80 (257)
T ss_dssp CSEECTTSEEEEEEEEESSCTTTS--------CCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEE
T ss_pred CccccCCceEEEEEEEecccCCCc--------cEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEE
Confidence 34688999999999998875 34 59999851 00 0 112379
Q ss_pred EEecCCCCCCEEEEEEEEeCCC-------C--cEEEEEEEEecCC---------------EEEeCCCceEEEecCCcEEE
Q psy6361 54 VINNIAEKDTNVYTCTVSNAAG-------S--TSKTIQMNVLVPP---------------FFKDEQQESVAIVVNHPMNI 109 (148)
Q Consensus 54 ~i~~~~~~d~g~y~C~~~~~~~-------~--~~~~~~l~v~~~p---------------~~~~~~~~~~~~~~g~~~~l 109 (148)
.|.+++.+|+|.|.|.+.+..+ . ......|.|...| .+... +....+.+|+.+.|
T Consensus 81 ~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~v~~G~~v~L 159 (257)
T 1f3r_B 81 KMNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQS-PSLLSASVGDRVTL 159 (257)
T ss_dssp EEESCCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEE-TSEECCCTTCCEEE
T ss_pred EECCCCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEcc-CCEEEEcCCCCEEE
Confidence 9999999999999999998753 1 1233567776543 12222 44566889999999
Q ss_pred EeeeecccCCeEEEEE--CCEEe
Q psy6361 110 SCSHYGVPTPDFSWYK--DGSLL 130 (148)
Q Consensus 110 ~C~~~g~p~~~~~W~~--~g~~l 130 (148)
.|.+.+.+.+.+.|+| +|..+
T Consensus 160 ~C~~~~~~~~~v~W~k~~~g~~~ 182 (257)
T 1f3r_B 160 SCKGSQNINNYLAWYQQKLGEAP 182 (257)
T ss_dssp EEECSSCCBTCEEEEEECTTSCC
T ss_pred EEEECCcCCCcEEEEEECCCCCc
Confidence 9999998888999999 56543
No 167
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.65 E-value=1.9e-15 Score=96.02 Aligned_cols=120 Identities=13% Similarity=0.128 Sum_probs=84.8
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE-E---------------------------------ecCCc
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL-Y---------------------------------VTRNG 51 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~-~---------------------------------~~~~~ 51 (148)
....+.+|+.+.|.|.+.+.+.+. ...+.|+|++. . ...+.
T Consensus 9 ~~V~~~~G~~v~L~C~~~~~~~~~-----~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (225)
T 4fmk_A 9 PEVRGRLGGTVELPCHLLPPTTER-----VSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDA 83 (225)
T ss_dssp SEEEEETTSCEEECCEECSSCCCE-----EEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBC
T ss_pred CEEEEecCCCEEEEEEEECCCCCc-----eeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcE
Confidence 356788999999999998876552 11488999750 0 01235
Q ss_pred eEEEecCCCCCCEEEEEEEEeCCCC-cEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEee-eecccCCeEEEEECCEE
Q psy6361 52 SFVINNIAEKDTNVYTCTVSNAAGS-TSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCS-HYGVPTPDFSWYKDGSL 129 (148)
Q Consensus 52 ~l~i~~~~~~d~g~y~C~~~~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~-~~g~p~~~~~W~~~g~~ 129 (148)
+|.|.+++.+|+|.|.|.+.+..+. ......+.+..+|..... +.......+..+.+.|. ..+.|.+.+.|++++..
T Consensus 84 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~ 162 (225)
T 4fmk_A 84 TLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAE-AQEVTIGPQSVAVARCVSTGGRPPARITWISSLGG 162 (225)
T ss_dssp CEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEE-ECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCC
T ss_pred EEEEccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeec-ccceeecceeeeeeeeeecCCCCCCEEEEEECCcc
Confidence 6999999999999999999887665 334445555566665554 44445556677777776 46678889999998765
Q ss_pred ee
Q psy6361 130 LR 131 (148)
Q Consensus 130 l~ 131 (148)
+.
T Consensus 163 ~~ 164 (225)
T 4fmk_A 163 EA 164 (225)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 168
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.65 E-value=2.3e-15 Score=100.87 Aligned_cols=112 Identities=13% Similarity=0.138 Sum_probs=84.2
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE-------ecCCceEEEecCCCCCCEEEEEEEEeCC-----C
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY-------VTRNGSFVINNIAEKDTNVYTCTVSNAA-----G 75 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~-------~~~~~~l~i~~~~~~d~g~y~C~~~~~~-----~ 75 (148)
..+..|+.+.|.|.+.+. .+ .+.|+|++.. ......|.|.+++.+|+|.|+|.+.+.. +
T Consensus 33 ~~v~~G~~v~L~C~~~~~-~~--------~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~ 103 (316)
T 3vh8_G 33 AVVPRGGHVTLRCHYRHR-FN--------NFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWS 103 (316)
T ss_dssp SEEETTSCEEEEEEBTTB-CC--------SEEEEESSCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBC
T ss_pred CccCCCCCEEEEEEccCC-Cc--------eEEEEeCCCccceeecCCcceEEEEECCCCcccCeEEEEEEEcCCCCccee
Confidence 457789999999999887 34 5999999721 2246789999999999999999998532 1
Q ss_pred CcEEEEEEEEe---cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEee
Q psy6361 76 STSKTIQMNVL---VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLR 131 (148)
Q Consensus 76 ~~~~~~~l~v~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~ 131 (148)
..+..+.|.|. .+|.+... +... +.+|+.+.|.|.+. .+.+.+.|+++|..+.
T Consensus 104 ~~s~~~~l~V~~~~~~p~~~~~-~~~~-v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~ 159 (316)
T 3vh8_G 104 APSNPVVIMVTGNHRKPSLLAH-PGPL-VKSGERVILQCWSD-IMFEHFFLHKEGISKD 159 (316)
T ss_dssp CCCCCEEEEEECSSCCCEEEEE-SCSE-EETTCCEEEEEEES-SCCSEEEEEETTCCSC
T ss_pred cCCCcEEEEEecCCCCCeEEec-CCCc-cCCCCeEEEEEcCC-CCCcEEEEEECCCccc
Confidence 23445666665 34566654 4443 88999999999995 4567899999998764
No 169
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.65 E-value=8.8e-16 Score=101.55 Aligned_cols=116 Identities=14% Similarity=0.095 Sum_probs=90.6
Q ss_pred eeeEeeeccceeeeeecccCC-CCcCCCCccEEEEeeCC---------EEecCCceEEEecCCCCCCEEEEEEEEeCCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNL-PQSRNPGQVIKRYLKDL---------LYVTRNGSFVINNIAEKDTNVYTCTVSNAAGS 76 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~-p~~~~~~~~~v~W~~~~---------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 76 (148)
...+..|+.+.|.|.+.+... | .+.|++++ ........|.|.++..+|+|.|+|.+.+..+.
T Consensus 98 ~~~v~~g~~v~l~C~~~~~~~~~--------~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 169 (292)
T 4dkd_C 98 EVVVFEDQDALLPCLLTDPVLEA--------GVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRK 169 (292)
T ss_dssp EEEEETTSCEECCEEESSGGGGS--------SEEEEEGGGCCCCSSCCEECCSSSCCEETTCCGGGCSEEEEEECSTTSC
T ss_pred eEEEcCCCcEEEeeeCCCCCcce--------eEEEEecCCCccccCCcccccCCceEEECCCCHHHCeEEEEEEEeCCCc
Confidence 456788999999999997332 4 59999973 22333456999999999999999999987665
Q ss_pred -cEEEEEEEEec----CCEEEeCCCceEEEecCCcEEEEeeeecccC-CeEEEEECCEEee
Q psy6361 77 -TSKTIQMNVLV----PPFFKDEQQESVAIVVNHPMNISCSHYGVPT-PDFSWYKDGSLLR 131 (148)
Q Consensus 77 -~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~-~~~~W~~~g~~l~ 131 (148)
.+..+.|.|.. +|.+... +....+.+|+.+.|.|.+.+.|. +.+.|++++..+.
T Consensus 170 ~~s~~~~l~V~~~~~~~p~i~~~-~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~ 229 (292)
T 4dkd_C 170 VMSISIRLKVQKVIPGPPALTLV-PAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLA 229 (292)
T ss_dssp EECCCEEEEEECCCCSSCEEEEE-SSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCC
T ss_pred eeEEEEEEEEeCCCCCCCeEEcc-CCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccc
Confidence 34467788875 8888777 66666679999999999988764 4688889887665
No 170
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.65 E-value=3e-16 Score=109.70 Aligned_cols=113 Identities=12% Similarity=0.232 Sum_probs=82.5
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE---ecCCceEEEecCCCCCCEEEEEEEEeCCC-C---cEEE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY---VTRNGSFVINNIAEKDTNVYTCTVSNAAG-S---TSKT 80 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~---~~~~~~l~i~~~~~~d~g~y~C~~~~~~~-~---~~~~ 80 (148)
..+..|+.+.|.|.+. +.| .++| +|.. ......|.|.++..+|+|.|+|.+.|..+ . ....
T Consensus 293 ~~v~~G~~v~l~C~~~--p~p--------~i~W--~g~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~ 360 (450)
T 1z7z_I 293 PEVSEGTEVTVKCEAH--PRA--------KVTL--NGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQT 360 (450)
T ss_dssp SEEETTCEEEEEEEC----------------------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEE
T ss_pred eeEeCCCcEEEEEecC--CCC--------EeEE--CCEEcCCCCceEEEEEecCcccCCceEEEEEEcCCCCccccccee
Confidence 3578899999999997 555 5999 5422 23456899999999999999999997554 2 3466
Q ss_pred EEEEEecCCEEEeCC-CceEEEecCCcEEEEeeeecccCCeEEEEECCEEeec
Q psy6361 81 IQMNVLVPPFFKDEQ-QESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 81 ~~l~v~~~p~~~~~~-~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~ 132 (148)
+.|.|..+|.+.... +....+.+|+.+.|.|.+.|.|.|.+.|+|+|..+..
T Consensus 361 ~~l~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~ 413 (450)
T 1z7z_I 361 RELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLP 413 (450)
T ss_dssp EECEEEEEEECCSTTSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECC
T ss_pred EEEEEecCCceeeccCCCceeEcCCCeEEEEEecccCCCCcEEEEECCcccCC
Confidence 788888888877652 3567899999999999999999999999999975443
No 171
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.64 E-value=1.5e-15 Score=99.44 Aligned_cols=108 Identities=17% Similarity=0.293 Sum_probs=80.4
Q ss_pred ceeeeEeeeccceeeeeec---ccCCCCcCCCCccEEEEeeCCE-------------------------Ee------cCC
Q psy6361 5 MNVEQAMLLDLIPMHSRYN---YTNLPQSRNPGQVIKRYLKDLL-------------------------YV------TRN 50 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~---~~~~p~~~~~~~~~v~W~~~~~-------------------------~~------~~~ 50 (148)
.....+..|+.+.|.|.+. +.+.+ .+.|++++. .. ..+
T Consensus 12 ~~~~~v~~G~~v~L~C~~~~~~~~~~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 83 (268)
T 3mj6_A 12 SPQLRVHVGESVLMGCVVQRTEEKHVD--------RVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHND 83 (268)
T ss_dssp CCEEEEETTCCEEECCBCCCSSCCCEE--------EEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTB
T ss_pred CCceEEecCCcEEEEEEeecCCCCceE--------EEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCE
Confidence 3457889999999999987 44444 699999530 00 112
Q ss_pred ceEEEecCCCCCCEEEEEEEEeCCCCc--EEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeee---ecccCCeEEEEE
Q psy6361 51 GSFVINNIAEKDTNVYTCTVSNAAGST--SKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSH---YGVPTPDFSWYK 125 (148)
Q Consensus 51 ~~l~i~~~~~~d~g~y~C~~~~~~~~~--~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~---~g~p~~~~~W~~ 125 (148)
..|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|. | .. +....+.+|+.+.|.|.+ .+.|.+.+.|++
T Consensus 84 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~--~---~~-p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~ 157 (268)
T 3mj6_A 84 GSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVL--P---EE-PRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMF 157 (268)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEE--C---CC-CSEEEEETTCCEEECCBCEESSSSCCCEEEEEE
T ss_pred EEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEe--c---cC-CCccccccCCcEEEEEEecCCCCCCccceEEEe
Confidence 679999999999999999999876553 334444443 1 13 556788899999999998 667899999998
Q ss_pred C
Q psy6361 126 D 126 (148)
Q Consensus 126 ~ 126 (148)
+
T Consensus 158 ~ 158 (268)
T 3mj6_A 158 S 158 (268)
T ss_dssp E
T ss_pred c
Confidence 3
No 172
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.64 E-value=7.9e-17 Score=103.63 Aligned_cols=118 Identities=14% Similarity=0.213 Sum_probs=81.5
Q ss_pred eeeEeeeccceeeeeecccCC-CCcCCCCccEEEEeeCC--E-----------------------EecCCceEEEecCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNL-PQSRNPGQVIKRYLKDL--L-----------------------YVTRNGSFVINNIAE 60 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~-p~~~~~~~~~v~W~~~~--~-----------------------~~~~~~~l~i~~~~~ 60 (148)
...+..|+.+.|.|.+.+.+. +. .+.|+|++ . .......|.|.+++.
T Consensus 28 ~~~v~~G~~v~L~C~~~~~~~~~~-------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 100 (234)
T 2j6e_L 28 SASGTPGQRVTISCSGSSSNIGSN-------YVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRS 100 (234)
T ss_dssp CCCBCTTCEEEEEEECCTTTTTTS-------CCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCS
T ss_pred cEEeeCCCcEEEEEEecCCCCCCC-------eEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCH
Confidence 456889999999999987543 31 48999852 0 001223799999999
Q ss_pred CCCEEEEEEEEeCCCC---cEEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEeeeecc-cC-CeEEEEECCEEee
Q psy6361 61 KDTNVYTCTVSNAAGS---TSKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCSHYGV-PT-PDFSWYKDGSLLR 131 (148)
Q Consensus 61 ~d~g~y~C~~~~~~~~---~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-~~~~W~~~g~~l~ 131 (148)
+|+|.|.|.+.+..+. ......|.|. .+|.+... +......+|+.+.|.|.+.|. |. +.+.|+|||..+.
T Consensus 101 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~-~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~ 179 (234)
T 2j6e_L 101 EDEADYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLF-PPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVK 179 (234)
T ss_dssp TTCSEEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEE-CCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECC
T ss_pred HHCEEEEEEEEcCCcceeEecCCEEEEEecCCCCCCccccc-CCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECC
Confidence 9999999999998762 2223445553 34444433 222223468899999999885 43 3899999999885
Q ss_pred c
Q psy6361 132 I 132 (148)
Q Consensus 132 ~ 132 (148)
.
T Consensus 180 ~ 180 (234)
T 2j6e_L 180 A 180 (234)
T ss_dssp S
T ss_pred C
Confidence 4
No 173
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.64 E-value=6e-16 Score=105.55 Aligned_cols=105 Identities=9% Similarity=0.131 Sum_probs=83.2
Q ss_pred eeeEeeeccceeeeeecc-----cCCCCcCCCCccEEEEeeCCEEec---------------------------C--Cce
Q psy6361 7 VEQAMLLDLIPMHSRYNY-----TNLPQSRNPGQVIKRYLKDLLYVT---------------------------R--NGS 52 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~-----~~~p~~~~~~~~~v~W~~~~~~~~---------------------------~--~~~ 52 (148)
...+..|+.+.|.|.+.+ .|.| .+.|++++.... . ...
T Consensus 185 ~~~~~~G~~v~l~C~~~~~~~~~~P~p--------~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (363)
T 1wio_A 185 IVYKKEGEQVEFSFPLAFTVEKLTGSG--------ELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLH 256 (363)
T ss_dssp EEEEETBCCEEEECCCCCCCCSSCEEE--------EEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCE
T ss_pred ceEEecCCEEEEEEEEecccccCCCce--------eEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceE
Confidence 455777999999998877 4555 699999861110 1 348
Q ss_pred EEEecCCCCCCEEEEEEEEeC--CCCcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCe--EEEEECCE
Q psy6361 53 FVINNIAEKDTNVYTCTVSNA--AGSTSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPD--FSWYKDGS 128 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~--~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~--~~W~~~g~ 128 (148)
|.|.++..+|+|.|+|.+.|. .+.....+.|.|. .. .|+.+.|.|.+.|.|.|. +.|+++|.
T Consensus 257 L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~------~v--------~g~~~~l~C~~~g~p~p~~~i~W~~~~~ 322 (363)
T 1wio_A 257 LTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVM------RA--------TQLQKNLTCEVWGPTSPKLMLSLKLENK 322 (363)
T ss_dssp EEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEE------EE--------CCCSSSEEEEEESSCCTTCCEEEECSSS
T ss_pred EEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEE------Ee--------cCCCeeEEEEEccccCCCccEEEEeCCC
Confidence 999999999999999999999 8877777777765 11 278899999999999888 99999998
Q ss_pred EeecC
Q psy6361 129 LLRIQ 133 (148)
Q Consensus 129 ~l~~~ 133 (148)
.+...
T Consensus 323 ~~~~~ 327 (363)
T 1wio_A 323 EAKVS 327 (363)
T ss_dssp SCSEE
T ss_pred ceeee
Confidence 87643
No 174
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.64 E-value=7.3e-16 Score=106.00 Aligned_cols=115 Identities=17% Similarity=0.252 Sum_probs=85.1
Q ss_pred eeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe---------cCCceEEEecC-CCCCCEEEEEEEEeCCCC-cEE
Q psy6361 11 MLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV---------TRNGSFVINNI-AEKDTNVYTCTVSNAAGS-TSK 79 (148)
Q Consensus 11 ~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~---------~~~~~l~i~~~-~~~d~g~y~C~~~~~~~~-~~~ 79 (148)
..|+.+.|.|.+.+.|.| .++|+|++... ..+..|.|.+. ..+|+|.|+|.|.|..+. .+.
T Consensus 21 ~eg~~v~L~C~~~g~P~p--------~i~W~k~g~~l~~~~~~~~~~~~g~l~i~~~~~~~D~G~Y~C~A~N~~G~~~s~ 92 (384)
T 3kld_A 21 SEEKKVKLSCEVKGNPKP--------HIRWKLNGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSR 92 (384)
T ss_dssp CSCSEEEECCEEEEESCC--------EEEEEETTEECCC----CEEEETTEEEEESCCHHHHCEEEEEEEEETTEEEECC
T ss_pred CCCCeEEEEeEecCCCCC--------EEEEEECCEECcCCCCccEEEECCEEEEcCCCCcccCEEEEEEEEcCcccEEec
Confidence 467899999999999988 69999998222 22456777766 678999999999998876 233
Q ss_pred EEEEEEecCCEEEeCCCceEEEecCCcEEEEeeee-cccCCeEEEEECCEEeecC
Q psy6361 80 TIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHY-GVPTPDFSWYKDGSLLRIQ 133 (148)
Q Consensus 80 ~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~-g~p~~~~~W~~~g~~l~~~ 133 (148)
...+.+...+.+.........+.+|+.+.|.|... +.|.+.+.|++++.++..+
T Consensus 93 ~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~ 147 (384)
T 3kld_A 93 EAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQD 147 (384)
T ss_dssp CEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCS
T ss_pred ceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEee
Confidence 45566554443333213457788999999999853 5677899999999887543
No 175
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.63 E-value=5.6e-16 Score=114.47 Aligned_cols=122 Identities=16% Similarity=0.245 Sum_probs=59.9
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE-------------------ecCCceEEEecCCCCCCEEEEE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY-------------------VTRNGSFVINNIAEKDTNVYTC 68 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~-------------------~~~~~~l~i~~~~~~d~g~y~C 68 (148)
..+..|+.+.|.|.+.+.+.|. ..+.|++++.. ......|.|.++..+|+|.|+|
T Consensus 234 ~~v~~G~~v~L~C~~~~~~~~~------~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 307 (772)
T 3v2a_R 234 IELSVGEKLVLNCTARTELNVG------IDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTC 307 (772)
T ss_dssp EEEETTCCEEEEEEEEECTTCC------CEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEE
T ss_pred eEEecCCcEEEEEEEecCCCCc------eeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEE
Confidence 4678899999999998754331 27999998721 0123469999999999999999
Q ss_pred EEEeCCCCcEEEEEEEEecCCEEEeCC--CceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCc
Q psy6361 69 TVSNAAGSTSKTIQMNVLVPPFFKDEQ--QESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSH 135 (148)
Q Consensus 69 ~~~~~~~~~~~~~~l~v~~~p~~~~~~--~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~ 135 (148)
.+.+..+..+..+.|.|..+|.+.... +....+.+|+.+.|.|.+.+.|.+.+.|+++|..+.....
T Consensus 308 ~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~~ 376 (772)
T 3v2a_R 308 AASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHT 376 (772)
T ss_dssp EEECSSCEEEEEEEEEEECCCC-----------------------------------------------
T ss_pred EEEcCCcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCce
Confidence 999988877778888888888765441 2346688999999999999999999999999998876443
No 176
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.63 E-value=1.1e-15 Score=99.72 Aligned_cols=119 Identities=14% Similarity=0.222 Sum_probs=80.3
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-------------------------EEec-CCc--eEEEec
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-------------------------LYVT-RNG--SFVINN 57 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-------------------------~~~~-~~~--~l~i~~ 57 (148)
....+..|+.+.|.|.+.+.+.+ .+.|||.. +... ... .|.|.+
T Consensus 9 ~~v~v~~G~~v~L~C~~~~~~~~--------~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~ 80 (253)
T 3to4_D 9 RWRLVPRGQAVNLRCILKNSQYP--------WMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQV 80 (253)
T ss_dssp SEEEEESSCCEEEEEECSCTTCC--------CEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEE
T ss_pred CeEEEeCCCcEEEEEEeCCCCcc--------eEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEcc
Confidence 35678999999999998776666 59999831 0000 000 199999
Q ss_pred CCCCCCEEEEEEEEeCCC------CcEEEEEEEEe------cCCEEEeCCCceEEEecCCcEEEEeeeec-ccCC-eEEE
Q psy6361 58 IAEKDTNVYTCTVSNAAG------STSKTIQMNVL------VPPFFKDEQQESVAIVVNHPMNISCSHYG-VPTP-DFSW 123 (148)
Q Consensus 58 ~~~~d~g~y~C~~~~~~~------~~~~~~~l~v~------~~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~-~~~W 123 (148)
++.+|+|.|+|.+.+..+ .......|.|. .+|.+....+....+.+|+.+.|.|.+.| .|.+ .+.|
T Consensus 81 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W 160 (253)
T 3to4_D 81 ANMSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSW 160 (253)
T ss_dssp ESCSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred CChhhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEE
Confidence 999999999999986543 12223456664 34444332011122234688999999988 5666 8999
Q ss_pred EECCEEeec
Q psy6361 124 YKDGSLLRI 132 (148)
Q Consensus 124 ~~~g~~l~~ 132 (148)
++||..+..
T Consensus 161 ~k~g~~l~~ 169 (253)
T 3to4_D 161 WVNGKEVHS 169 (253)
T ss_dssp EETTEEECT
T ss_pred EECCEECCC
Confidence 999999864
No 177
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.63 E-value=2.2e-15 Score=98.17 Aligned_cols=111 Identities=15% Similarity=0.196 Sum_probs=82.7
Q ss_pred eeeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeCC---------------------------EEec-----CCce
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDL---------------------------LYVT-----RNGS 52 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~---------------------------~~~~-----~~~~ 52 (148)
...+..|+.+.|.|.+.+.+ .+ .+.|+|.. .... ....
T Consensus 10 ~~~v~~G~~v~L~C~~~g~~~~~~--------~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 81 (253)
T 3uzq_A 10 AELVKPGASVRLSCTASGFNIKDT--------YMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAY 81 (253)
T ss_dssp CEEECTTCCEEEEEEECSSCGGGS--------CEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEE
T ss_pred CeeecCCCcEEEEEEeeCCcccCc--------eEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEE
Confidence 46788999999999998754 44 59999821 0000 1224
Q ss_pred EEEecCCCCCCEEEEEEEEeCCCCc-EEEEEEEEec---------------CCEEEeCCCceEEEecCCcEEEEeeeecc
Q psy6361 53 FVINNIAEKDTNVYTCTVSNAAGST-SKTIQMNVLV---------------PPFFKDEQQESVAIVVNHPMNISCSHYGV 116 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~~~~~-~~~~~l~v~~---------------~p~~~~~~~~~~~~~~g~~~~l~C~~~g~ 116 (148)
|.|.+++.+|+|.|+|.+.+..+.. .....|.|.. +|.+... +....+.+|+++.|.|.+.+.
T Consensus 82 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~-p~~~~v~~G~~v~L~C~~~~~ 160 (253)
T 3uzq_A 82 LHLSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQT-PASLAVSLGQRATISCRASEN 160 (253)
T ss_dssp EEECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEE-CSEEEECTTSCEEEEEEESSC
T ss_pred EEeCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECc-CCeEEEeCCCCEEEEEEecCc
Confidence 9999999999999999998855442 3445666663 3556655 667889999999999999888
Q ss_pred cCC----eEEEEEC
Q psy6361 117 PTP----DFSWYKD 126 (148)
Q Consensus 117 p~~----~~~W~~~ 126 (148)
+.+ .+.|||+
T Consensus 161 ~~~~~~~~v~W~r~ 174 (253)
T 3uzq_A 161 VDRYGNSFMHWYQQ 174 (253)
T ss_dssp CEETTEECEEEEEE
T ss_pred cccCCCcEEEEEEE
Confidence 776 8999984
No 178
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.63 E-value=1.3e-15 Score=100.14 Aligned_cols=117 Identities=16% Similarity=0.210 Sum_probs=81.9
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-------------------------EE-----ecCCceEEEe
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-------------------------LY-----VTRNGSFVIN 56 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-------------------------~~-----~~~~~~l~i~ 56 (148)
...+..|+.+.|.|.+.+ +.+ .+.|+|.. +. ......|.|.
T Consensus 36 ~v~v~~G~~v~L~C~~~~-~~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 106 (270)
T 3qib_D 36 YLVKGQGQKAKMRCIPEK-GHP--------VVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQ 106 (270)
T ss_dssp EEEEETTSCEEEEEECCT-TCC--------EEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEES
T ss_pred eEEEcCCCCEEEEEEecC-CCc--------eEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEEC
Confidence 467889999999999865 333 69999821 00 0124579999
Q ss_pred cCCCCCCEEEEEEEEeCCC----CcEEEEEEEEec------CCEEEeCCCceEEEecCCcEEEEeeeec-ccCC-eEEEE
Q psy6361 57 NIAEKDTNVYTCTVSNAAG----STSKTIQMNVLV------PPFFKDEQQESVAIVVNHPMNISCSHYG-VPTP-DFSWY 124 (148)
Q Consensus 57 ~~~~~d~g~y~C~~~~~~~----~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~-~~~W~ 124 (148)
+++.+|+|.|.|.+.+... .......|.|.. +|.+....+....+.+|+.+.|.|.+.| .|.+ .+.|+
T Consensus 107 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~ 186 (270)
T 3qib_D 107 SSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 186 (270)
T ss_dssp SCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeCCCeEEEEE
Confidence 9999999999999986421 122334566654 4554432122233445899999999988 6666 89999
Q ss_pred ECCEEeec
Q psy6361 125 KDGSLLRI 132 (148)
Q Consensus 125 ~~g~~l~~ 132 (148)
+||..+..
T Consensus 187 k~g~~l~~ 194 (270)
T 3qib_D 187 VNGKEVHS 194 (270)
T ss_dssp ETTEEECT
T ss_pred ECCEECCC
Confidence 99999864
No 179
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.63 E-value=1.8e-15 Score=99.86 Aligned_cols=111 Identities=11% Similarity=0.119 Sum_probs=80.3
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EEe--------------------cCCceEEEecCCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LYV--------------------TRNGSFVINNIAEK 61 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~~--------------------~~~~~l~i~~~~~~ 61 (148)
...+..|+.+.|.|.+.+.+.| .+.|+|++ ... .....|.|.+++.+
T Consensus 21 ~~~v~~G~~v~L~C~~~~~p~~--------~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 92 (276)
T 3auv_A 21 SLSASVGDRVTITCRASQDVST--------AVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPE 92 (276)
T ss_dssp EEECCTTCCEEEEEEESSCCTT--------CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eEEEcCCCCEEEEeEcCCCCCC--------cEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChh
Confidence 4568899999999999988766 59999853 000 11237999999999
Q ss_pred CCEEEEEEEEeCCCC-cEEEEEEEEecCC-------------E-EEeCCCceEEEecCCcEEEEeeeeccc--CCeEEEE
Q psy6361 62 DTNVYTCTVSNAAGS-TSKTIQMNVLVPP-------------F-FKDEQQESVAIVVNHPMNISCSHYGVP--TPDFSWY 124 (148)
Q Consensus 62 d~g~y~C~~~~~~~~-~~~~~~l~v~~~p-------------~-~~~~~~~~~~~~~g~~~~l~C~~~g~p--~~~~~W~ 124 (148)
|+|.|.|.+.+..+. ......|.|...| . .... +....+.+|+.+.|.|.+.+.+ .+.+.||
T Consensus 93 DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~-p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~ 171 (276)
T 3auv_A 93 DFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVE-SGGGLVQPGGSLRLSCAASGFTISDYWIHWV 171 (276)
T ss_dssp GCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEE-ECCEEECTTCCEEEEEEEESSCGGGSEEEEE
T ss_pred hCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEEC-CCceEecCCCeEEEEEEecCccCCCCEEEEE
Confidence 999999999987543 2333456665432 1 2223 4567888999999999998875 5899999
Q ss_pred EC
Q psy6361 125 KD 126 (148)
Q Consensus 125 ~~ 126 (148)
|+
T Consensus 172 k~ 173 (276)
T 3auv_A 172 RQ 173 (276)
T ss_dssp EE
T ss_pred Ec
Confidence 96
No 180
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.63 E-value=1.3e-15 Score=99.72 Aligned_cols=111 Identities=14% Similarity=0.251 Sum_probs=86.0
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe---cCCceEEEecCCCCCCEEEEEEEEeCC-CCcE---EE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV---TRNGSFVINNIAEKDTNVYTCTVSNAA-GSTS---KT 80 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~---~~~~~l~i~~~~~~d~g~y~C~~~~~~-~~~~---~~ 80 (148)
..+..|+.+.|.|.+. +.| .++| ++... .....|.|..+..+|.|.|+|.+.|.. +... ..
T Consensus 108 ~~v~~G~~v~l~C~~~--p~~--------~i~W--~g~~~~~~~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~ 175 (265)
T 2oz4_A 108 PEVSEGTEVTVKCEAH--PRA--------KVTL--NGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQT 175 (265)
T ss_dssp SEEETTCEEEEEEECC--TTS--------EEEE--SSCSSSCCSSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEE
T ss_pred ceecCCCcEEEEEEcc--CCC--------EEEE--CCEEccCCCCcEEEEEccccccCCceEEEEEEcCCCCCccccccc
Confidence 4567799999999998 555 6999 54211 234568888888999999999998544 5543 66
Q ss_pred EEEEEecCCEEEeCC-CceEEEecCCcEEEEeeeecccCCeEEEEECCEEe
Q psy6361 81 IQMNVLVPPFFKDEQ-QESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLL 130 (148)
Q Consensus 81 ~~l~v~~~p~~~~~~-~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l 130 (148)
+.|.|..+|.+.... +....+.+|+.+.|.|.+.|.|.|.+.|+++|..+
T Consensus 176 ~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~ 226 (265)
T 2oz4_A 176 RELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFP 226 (265)
T ss_dssp EEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEE
T ss_pred EEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCccc
Confidence 778888888775442 34678899999999999999999999999998743
No 181
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.63 E-value=1.9e-15 Score=97.66 Aligned_cols=120 Identities=16% Similarity=0.262 Sum_probs=83.9
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EE---------------------e---cCCceEEE
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LY---------------------V---TRNGSFVI 55 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~---------------------~---~~~~~l~i 55 (148)
.....+..|+.+.|.|.+.. +.+ .+.|+|++ .. . .....|.|
T Consensus 6 p~~v~v~~G~~v~L~C~~~~-~~~--------~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I 76 (238)
T 1bec_A 6 PRNKVAVTGGKVTLSCQQTN-NHN--------NMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLIL 76 (238)
T ss_dssp CSEEEEETTCCEEEEEEESS-CCS--------EEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEE
T ss_pred CCeeEEeCCCcEEEEEEeCC-CCc--------eEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEE
Confidence 34567899999999999843 333 69999852 00 0 11247999
Q ss_pred ecCCCCCCEEEEEEEEeCCC---C--cEEEEEEEEec------CCEEEeCCCceEEEecCCcEEEEeeeecc-cCC-eEE
Q psy6361 56 NNIAEKDTNVYTCTVSNAAG---S--TSKTIQMNVLV------PPFFKDEQQESVAIVVNHPMNISCSHYGV-PTP-DFS 122 (148)
Q Consensus 56 ~~~~~~d~g~y~C~~~~~~~---~--~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~-~~~ 122 (148)
.+++.+|+|.|.|.+.+..+ . ......|.|.. +|.+....+....+.+|+.+.|.|.+.|. |.+ .+.
T Consensus 77 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~ 156 (238)
T 1bec_A 77 ELATPSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELS 156 (238)
T ss_dssp SSCCGGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEE
T ss_pred ecCCcccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEE
Confidence 99999999999999998642 1 12234566653 45554431333334578999999999886 655 899
Q ss_pred EEECCEEeecC
Q psy6361 123 WYKDGSLLRIQ 133 (148)
Q Consensus 123 W~~~g~~l~~~ 133 (148)
|++||..+...
T Consensus 157 W~~~g~~~~~~ 167 (238)
T 1bec_A 157 WWVNGKEVHSG 167 (238)
T ss_dssp EEETTEEECTT
T ss_pred EEECCEECCCc
Confidence 99999988653
No 182
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.63 E-value=1.6e-15 Score=97.43 Aligned_cols=115 Identities=11% Similarity=0.145 Sum_probs=78.7
Q ss_pred eeeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeCC-----EE----e-----------------------cCCce
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDL-----LY----V-----------------------TRNGS 52 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~-----~~----~-----------------------~~~~~ 52 (148)
...+..|+.+.|.|.+.+.+ .+ .+.|+|++ .. . .....
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~--------~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 80 (227)
T 1mju_H 9 AELVKPGASVKLSCKASGYTFTNY--------WINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAY 80 (227)
T ss_dssp EEEECTTCCEEEEEEEESSCGGGS--------CEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEE
T ss_pred CeEEcCCCCEEEEEEecCCccccc--------eEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEE
Confidence 46789999999999998765 34 59999852 00 0 01247
Q ss_pred EEEecCCCCCCEEEEEEEEeCCCC-cEEEEEEEEec----CCEEEeCCCceEEEecCCcEEEEeeeecc-cCC-eEEEEE
Q psy6361 53 FVINNIAEKDTNVYTCTVSNAAGS-TSKTIQMNVLV----PPFFKDEQQESVAIVVNHPMNISCSHYGV-PTP-DFSWYK 125 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~~~~-~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~-~~~W~~ 125 (148)
|.|.+++.+|+|.|.|.+.+.... ......|.|.. +|.+... .....+.+|+.+.|.|.+.|. |.+ .+.|++
T Consensus 81 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~-~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 159 (227)
T 1mju_H 81 MQLSSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPL-APVCGDTSGSSVTLGCLVKGYFPEPVTLTWNS 159 (227)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEE-CCCC------CEEEEEEEEEEBSSCCEEEEGG
T ss_pred EEECCCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEe-cCCccccCCCcEEEEEEeecEeCCCeEEEEec
Confidence 999999999999999999885321 12234677763 4555543 333356689999999999885 766 999999
Q ss_pred CCEEe
Q psy6361 126 DGSLL 130 (148)
Q Consensus 126 ~g~~l 130 (148)
+|..+
T Consensus 160 ~g~~~ 164 (227)
T 1mju_H 160 GSLSS 164 (227)
T ss_dssp GTBCT
T ss_pred CCCcC
Confidence 98764
No 183
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.63 E-value=5.3e-16 Score=105.25 Aligned_cols=115 Identities=15% Similarity=0.128 Sum_probs=83.8
Q ss_pred eeeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeC--C--E-E----------------------e-----cCCce
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKD--L--L-Y----------------------V-----TRNGS 52 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~--~--~-~----------------------~-----~~~~~ 52 (148)
...+..|+.+.|.|.+.+.+ .+ .+.|+|+ + . . . .....
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~--------~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 80 (344)
T 1za6_B 9 AEVVKPGASVKISCKASGYTFTDH--------AIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAY 80 (344)
T ss_dssp CEEECTTCCEEEEEEEESSCTTSS--------CEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEE
T ss_pred CeEEeCCCcEEEEEEcCCcccccc--------EEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEE
Confidence 46789999999999998764 33 5999986 2 0 0 0 01247
Q ss_pred EEEecCCCCCCEEEEEEEEeCCCCcEEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEeeeecc-cC-CeEEEEEC
Q psy6361 53 FVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCSHYGV-PT-PDFSWYKD 126 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-~~~~W~~~ 126 (148)
|.|.+++.+|+|.|.|.+.+..+.......|.|. .+|.+... ++...+.+|+.+.|.|.+.|. |. +.+.|+++
T Consensus 81 L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~ 159 (344)
T 1za6_B 81 VELSSLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPL-APSSKSTSGGTAALGCLVKDYFPEPVTVSWNSG 159 (344)
T ss_dssp EEECSCCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEE-CCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTT
T ss_pred EEECCCCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEc-cccccccCCCcEEEEEEEeeEECCCeEEEEecC
Confidence 9999999999999999998855443445577776 34555443 333345689999999999886 54 69999999
Q ss_pred CEEe
Q psy6361 127 GSLL 130 (148)
Q Consensus 127 g~~l 130 (148)
|..+
T Consensus 160 g~~~ 163 (344)
T 1za6_B 160 ALTS 163 (344)
T ss_dssp TBCT
T ss_pred CccC
Confidence 9763
No 184
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.62 E-value=1.5e-16 Score=106.16 Aligned_cols=115 Identities=11% Similarity=0.064 Sum_probs=85.5
Q ss_pred eeeccceeeeee-cccCCCCcCCCCccEEEEeeCC------EEec-C-----CceEEEecCCCCCCEEEEEEEEeCCCCc
Q psy6361 11 MLLDLIPMHSRY-NYTNLPQSRNPGQVIKRYLKDL------LYVT-R-----NGSFVINNIAEKDTNVYTCTVSNAAGST 77 (148)
Q Consensus 11 ~~g~~~~l~C~~-~~~~~p~~~~~~~~~v~W~~~~------~~~~-~-----~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 77 (148)
..|+.+.+.|.. .+.|.| .+.|++++ .... . ...|.|..+...|.|.|+|.+.|..+..
T Consensus 127 ~~~~~~~l~C~~~~g~P~~--------~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~ 198 (308)
T 4fom_A 127 GGNETVAAICIAATGKPVA--------HIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEK 198 (308)
T ss_dssp TCSCEEEEEEEEEEEBSCC--------EEEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSS
T ss_pred cCCceEEEEEEecCCcCCc--------eEEEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCC
Confidence 356778999976 456666 69999987 1111 1 2358899999999999999999987653
Q ss_pred --EEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCC-eEEEEECCEEeecC
Q psy6361 78 --SKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTP-DFSWYKDGSLLRIQ 133 (148)
Q Consensus 78 --~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~~~W~~~g~~l~~~ 133 (148)
...+.|.|..+|.+.........+.+|+.+.|.|.+.|.|.| .+.|+|++..+...
T Consensus 199 ~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~ 257 (308)
T 4fom_A 199 DIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDG 257 (308)
T ss_dssp CEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSS
T ss_pred ceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCc
Confidence 445566666778776552344556678899999999999988 69999998877543
No 185
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.62 E-value=4.1e-15 Score=96.44 Aligned_cols=112 Identities=12% Similarity=0.102 Sum_probs=80.0
Q ss_pred eeeeEeeeccceeeeeecccC-----CCCcCCCCccEEEEeeCC-----E-E-------------------ecCCceEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTN-----LPQSRNPGQVIKRYLKDL-----L-Y-------------------VTRNGSFVI 55 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~-----~p~~~~~~~~~v~W~~~~-----~-~-------------------~~~~~~l~i 55 (148)
....+..|+.+.|.|.+.+.+ .+ .+.|+|+. . . ......|.|
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 80 (247)
T 1svz_A 9 LYLPVSLGDQASISCRSSQTIVHNNGNT--------YLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKI 80 (247)
T ss_dssp SEEEECTTCCEEEEEEESSCCBCTTSCB--------CEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred CeEEecCCCCEEEEEeCCCcccccCCCc--------eEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEE
Confidence 356788999999999998876 34 59999842 1 0 011237999
Q ss_pred ecCCCCCCEEEEEEEEeCCCC-cEEEEEEEEecCC-------------EEEeCCCceEEEecCCcEEEEeeeeccc--CC
Q psy6361 56 NNIAEKDTNVYTCTVSNAAGS-TSKTIQMNVLVPP-------------FFKDEQQESVAIVVNHPMNISCSHYGVP--TP 119 (148)
Q Consensus 56 ~~~~~~d~g~y~C~~~~~~~~-~~~~~~l~v~~~p-------------~~~~~~~~~~~~~~g~~~~l~C~~~g~p--~~ 119 (148)
.+++.+|+|.|.|.+.+..+. ......|.|..++ ..... +....+.+|+.+.|.|.+.+.+ .+
T Consensus 81 ~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~~ 159 (247)
T 1svz_A 81 SRVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQ-SGPELKKPGETVKISCKATNYAFTDY 159 (247)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEE-CCCEEECTTCCEEEEEEEESSCGGGS
T ss_pred CCCCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeC-CCceeecCCCcEEEEEEEcCcccCCc
Confidence 999999999999999887543 2234567776432 12222 3445688999999999998874 56
Q ss_pred eEEEEEC
Q psy6361 120 DFSWYKD 126 (148)
Q Consensus 120 ~~~W~~~ 126 (148)
.+.|||+
T Consensus 160 ~v~W~k~ 166 (247)
T 1svz_A 160 SMHWVKQ 166 (247)
T ss_dssp CEEEEEE
T ss_pred EEEEEEe
Confidence 8999985
No 186
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.62 E-value=2.5e-15 Score=84.90 Aligned_cols=74 Identities=14% Similarity=0.167 Sum_probs=61.8
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe-------------cCCceEEEecCCCCCCEEEEEEEE
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV-------------TRNGSFVINNIAEKDTNVYTCTVS 71 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~-------------~~~~~l~i~~~~~~d~g~y~C~~~ 71 (148)
..+..+..|+.+.|.|.+.+.|.| .+.|+|++... .....|.|.++..+|+|.|+|.+.
T Consensus 12 p~~~~v~~G~~~~l~C~~~g~P~p--------~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 83 (100)
T 3knb_A 12 PSDISIDEGKVLTVACAFTGEPTP--------EVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp CSEEEEETTSEEEEEEEEEEESCC--------EEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCcEEEeCCCeEEEEEEEEEecCC--------EEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEE
Confidence 356788999999999999999998 69999997221 122479999999999999999999
Q ss_pred eCCCCcEEEEEEEEe
Q psy6361 72 NAAGSTSKTIQMNVL 86 (148)
Q Consensus 72 ~~~~~~~~~~~l~v~ 86 (148)
|..|..+..+.|.|.
T Consensus 84 N~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 84 NEFGSDSATVNIHIR 98 (100)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred ECCCEEEEEEEEEEE
Confidence 999987777777764
No 187
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.62 E-value=7.2e-16 Score=97.77 Aligned_cols=114 Identities=13% Similarity=0.221 Sum_probs=82.5
Q ss_pred eeeEeeeccceeeeeecccCC--CCcCCCCccEEEEeeCC---EE-----------------------e-----cCCceE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNL--PQSRNPGQVIKRYLKDL---LY-----------------------V-----TRNGSF 53 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~--p~~~~~~~~~v~W~~~~---~~-----------------------~-----~~~~~l 53 (148)
...+..|+.+.|.|.+.+.+. + .+.|+|++ .. . .....|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~--------~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 80 (210)
T 3d9a_H 9 PSLVKPSQTLSLTCSVTGDSITSD--------YWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYL 80 (210)
T ss_dssp CSEECTTSCEEEEEEEESSCGGGS--------CEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEE
T ss_pred CEEecCCCcEEEEEEEecccCCCC--------cEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEE
Confidence 457899999999999988652 4 59999852 00 0 012389
Q ss_pred EEecCCCCCCEEEEEEEEeCCCCcEEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEeeeecc-cCC-eEEEEECC
Q psy6361 54 VINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCSHYGV-PTP-DFSWYKDG 127 (148)
Q Consensus 54 ~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~-~~~W~~~g 127 (148)
.|.+++.+|+|.|.|.+.+.. .......|.|. .+|.+... +....+.+|+.+.|.|.+.|. |.| .+.|+++|
T Consensus 81 ~I~~v~~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~-~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~ 158 (210)
T 3d9a_H 81 DLNSVTTEDTATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPL-APGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGS 158 (210)
T ss_dssp EECSCCGGGCEEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEE-CCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred EECCCCcccCEEEEEEEecCc-ccccceEEEeccCCCCCCEEEEe-cCCcccccCCcEEEEEEEeeEecCCcEEEEeeCC
Confidence 999999999999999998763 22223456665 34555544 323345689999999999887 888 99999998
Q ss_pred EEe
Q psy6361 128 SLL 130 (148)
Q Consensus 128 ~~l 130 (148)
..+
T Consensus 159 ~~~ 161 (210)
T 3d9a_H 159 LSS 161 (210)
T ss_dssp BCT
T ss_pred ccc
Confidence 753
No 188
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.62 E-value=2.5e-15 Score=95.88 Aligned_cols=114 Identities=15% Similarity=0.200 Sum_probs=83.3
Q ss_pred eeeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeCC---E--Ee-----------------------------cCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDL---L--YV-----------------------------TRN 50 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~---~--~~-----------------------------~~~ 50 (148)
...+..|+.+.|.|.+.+.+ .+ .+.|+|++ . .. ...
T Consensus 9 ~~~~~~G~~v~L~C~~~~~~~~~~--------~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 80 (220)
T 1pz5_B 9 GGLVQPGGSMKLSCVASGFTFSNY--------WMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSS 80 (220)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGS--------EEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTE
T ss_pred CEEEcCCCeEEEEEEEcCCccCCc--------cEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCe
Confidence 46789999999999998765 34 69999852 0 00 011
Q ss_pred ceEEEecCCCCCCEEEEEEEEeCCCCc---EEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEeeeecc-cCC-eE
Q psy6361 51 GSFVINNIAEKDTNVYTCTVSNAAGST---SKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCSHYGV-PTP-DF 121 (148)
Q Consensus 51 ~~l~i~~~~~~d~g~y~C~~~~~~~~~---~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~-~~ 121 (148)
..|.|.+++.+|+|.|.|.+.+..+.. .....|.|. .+|.+... +....+.+|+.+.|.|.+.|. |.| .+
T Consensus 81 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~~g~~v~L~C~~~g~~P~p~~v 159 (220)
T 1pz5_B 81 VYLQMNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPL-VPGCSDTSGSSVTLGCLVKGYFPEPVTV 159 (220)
T ss_dssp EEEEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEE-CCCSCCSCSSSEEEEEEEEEEBSSCCEE
T ss_pred EEEEEccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEc-ccccccCCCCcEEEEEEEEEEeCCCeEE
Confidence 279999999999999999999875321 134567766 34655544 333345689999999999887 888 99
Q ss_pred EEEECCEE
Q psy6361 122 SWYKDGSL 129 (148)
Q Consensus 122 ~W~~~g~~ 129 (148)
.|++++..
T Consensus 160 ~W~~~~~~ 167 (220)
T 1pz5_B 160 KWNYGALS 167 (220)
T ss_dssp EEGGGTCC
T ss_pred EEecCCcc
Confidence 99998863
No 189
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.62 E-value=8.5e-16 Score=103.41 Aligned_cols=115 Identities=13% Similarity=0.252 Sum_probs=81.6
Q ss_pred eEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec----------CC------ceEEEecCCCCCCEEEEEEEEe
Q psy6361 9 QAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT----------RN------GSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 9 ~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~----------~~------~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
.+..|+.+.|.|.+.+.+.|. ..+.|++++.... .. ..|.|.....+|.|.|+|.+.|
T Consensus 128 ~~~~g~~~~l~C~~~g~p~~~------~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n 201 (327)
T 2wng_A 128 RATPQHTVSFTCESHGFSPRD------ITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAH 201 (327)
T ss_dssp CBCTTCEEEEEEEEEEEBSSC------CEEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEEC
T ss_pred ccCCCCEEEEEEEEeCccCCC------cEEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEec
Confidence 467799999999999887651 1699999982211 11 1355666666668999999999
Q ss_pred CCCCc---EEEEEE--EEecCCEEEeCCCceEEEecCCcEEEEeeeeccc-CC-eEEEEECCEEeec
Q psy6361 73 AAGST---SKTIQM--NVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVP-TP-DFSWYKDGSLLRI 132 (148)
Q Consensus 73 ~~~~~---~~~~~l--~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p-~~-~~~W~~~g~~l~~ 132 (148)
..+.. .....+ .+..+|.+... +.. +.+|+.+.|.|.+.|.+ .+ .+.|++||..+..
T Consensus 202 ~~~~~~~~~~~~~~~~~v~~~P~i~~~-~~~--~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 265 (327)
T 2wng_A 202 VTLQGDPLRGTANLSETIRVPPTLEVT-QQP--VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRT 265 (327)
T ss_dssp TTSCSCCEEEEEEGGGTBCBCCEEEEE-EEC--CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEE
T ss_pred cccCCCcccceEEeccccCCCCEEEEe-cCC--cCCCCcEEEEEEEccccCCCcEEEEEECCeEccC
Confidence 87652 223333 23467777655 333 67899999999999854 44 7999999998864
No 190
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.61 E-value=4.5e-15 Score=94.43 Aligned_cols=117 Identities=9% Similarity=0.071 Sum_probs=79.1
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EEe------------------------cCCceEEEec
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LYV------------------------TRNGSFVINN 57 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~~------------------------~~~~~l~i~~ 57 (148)
...+..|+.+.|.|.+.+.+.+. ..+.|||.. ... .....|.|.+
T Consensus 8 ~~~v~~G~~v~L~C~~~~~~~~~------~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 81 (215)
T 3nl4_H 8 GRLVTPGTPLTLACTVSGFSLNT------YSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITS 81 (215)
T ss_dssp CCEECTTCCEEEEEEEESSCTTT------CCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESS
T ss_pred CEEEcCCCcEEEEEEecCcccCC------CeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECC
Confidence 46788999999999997643111 159998742 100 1123599999
Q ss_pred CCCCCCEEEEEEEEeCCCC----cEEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEeeeecccC--CeEEEEECC
Q psy6361 58 IAEKDTNVYTCTVSNAAGS----TSKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCSHYGVPT--PDFSWYKDG 127 (148)
Q Consensus 58 ~~~~d~g~y~C~~~~~~~~----~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~--~~~~W~~~g 127 (148)
++.+|+|.|.|.+.+..+. ......|.|. .+|.+... +....+.+|+.+.|.|.+.+.++ ..+.|+++|
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g 160 (215)
T 3nl4_H 82 PTTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPL-APCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGT 160 (215)
T ss_dssp CCGGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEE-CCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred CCcccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEe-cCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCC
Confidence 9999999999999987542 2334567775 45666533 33334567999999999988643 357799998
Q ss_pred EEe
Q psy6361 128 SLL 130 (148)
Q Consensus 128 ~~l 130 (148)
..+
T Consensus 161 ~~~ 163 (215)
T 3nl4_H 161 LTN 163 (215)
T ss_dssp BCT
T ss_pred EEC
Confidence 743
No 191
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.61 E-value=5e-15 Score=98.03 Aligned_cols=114 Identities=14% Similarity=0.206 Sum_probs=83.7
Q ss_pred eeeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeCC-----E---------------------E-ec-----CCce
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDL-----L---------------------Y-VT-----RNGS 52 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~-----~---------------------~-~~-----~~~~ 52 (148)
...+..|+.+.|.|.+.+.+ .+ .+.|+|++ . . .. ....
T Consensus 35 ~~~v~~G~~v~L~C~~~g~~~~~~--------~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 106 (282)
T 1qok_A 35 AELVRSGTSVKLSCTASGFNIKDS--------YMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAY 106 (282)
T ss_dssp CEEEETTCCEEEEEEEESSCGGGS--------CEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEE
T ss_pred CEEEeCCCeEEEEEeccCCCCCCc--------eEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEE
Confidence 45788999999999998765 34 59999852 0 0 00 1247
Q ss_pred EEEecCCCCCCEEEEEEEEeCCC---C--cEEEEEEEEecCC---------------EEEeCCCceEEEecCCcEEEEee
Q psy6361 53 FVINNIAEKDTNVYTCTVSNAAG---S--TSKTIQMNVLVPP---------------FFKDEQQESVAIVVNHPMNISCS 112 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~~~---~--~~~~~~l~v~~~p---------------~~~~~~~~~~~~~~g~~~~l~C~ 112 (148)
|.|.+++.+|+|.|.|.+.+..+ . ....+.|.|...| .+... +....+.+|+++.|.|.
T Consensus 107 L~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~v~~G~~v~L~C~ 185 (282)
T 1qok_A 107 LQLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQS-PAIMSASPGEKVTITCS 185 (282)
T ss_dssp EEECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEE-CSEEEECTTCCEEEEEE
T ss_pred EEECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecC-CCEEEEcCCCcEEEEEE
Confidence 99999999999999999998765 1 1233467776533 34444 55677889999999999
Q ss_pred eecccCCeEEEEE--CCEEe
Q psy6361 113 HYGVPTPDFSWYK--DGSLL 130 (148)
Q Consensus 113 ~~g~p~~~~~W~~--~g~~l 130 (148)
+.+.+ +.+.||| +|..+
T Consensus 186 ~~~~~-~~v~W~k~~~g~~~ 204 (282)
T 1qok_A 186 ASSSV-SYMHWFQQKPGTSP 204 (282)
T ss_dssp ESSCC-SCCEEEEECTTSCC
T ss_pred ecCCC-ceEEEEEECCCCCc
Confidence 99988 8999999 66544
No 192
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.61 E-value=7.1e-15 Score=102.30 Aligned_cols=111 Identities=13% Similarity=0.109 Sum_probs=79.2
Q ss_pred eeccceeeeeecc-cCCCCcCCCCccEEEEeeCCEEecCC------------------ceEEEecCCCCCCEEEEEEEEe
Q psy6361 12 LLDLIPMHSRYNY-TNLPQSRNPGQVIKRYLKDLLYVTRN------------------GSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 12 ~g~~~~l~C~~~~-~~~p~~~~~~~~~v~W~~~~~~~~~~------------------~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
.|+.+.|.|.+.+ .|.|. .+.|+|++...... ..|.|.++..+|+|.|+|.+.|
T Consensus 130 ~g~~~~l~C~~~g~~p~~~-------~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 202 (438)
T 1qgc_4 130 TSGGASVVCFLNNFYPKDI-------NVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATH 202 (438)
T ss_dssp HTTEEEEEEEEEEEBSSCE-------EEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEE
T ss_pred cCCceEEEEEEccccCCCc-------EEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEe
Confidence 3678999999987 45543 69999988332211 3689999999999999999999
Q ss_pred CCCCcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeeccc--CCeEEEEEC--CEEe
Q psy6361 73 AAGSTSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVP--TPDFSWYKD--GSLL 130 (148)
Q Consensus 73 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p--~~~~~W~~~--g~~l 130 (148)
..+.......+.....+..... +....+.+|+.+.|.|.+.|.| .+.+.|+|+ |..+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~ 263 (438)
T 1qgc_4 203 KTSTSPIVKSFNRNECEVMLVE-SGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRL 263 (438)
T ss_dssp TTCSSCEEEEEETTC-CCEEEE-ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEE
T ss_pred cccCCceecccccccceeEEec-CCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCc
Confidence 8776433322222122222333 4567788999999999999887 679999986 5443
No 193
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.61 E-value=1.8e-15 Score=96.93 Aligned_cols=116 Identities=13% Similarity=0.123 Sum_probs=82.4
Q ss_pred eeeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeCC-----EEe----------------------c-----CCce
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDL-----LYV----------------------T-----RNGS 52 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~-----~~~----------------------~-----~~~~ 52 (148)
...+..|+.+.|.|.+.+.+ .+ .+.|||.. ... . ....
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~--------~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 80 (223)
T 1dee_B 9 GGVVQPGKSLRLSCAASGFTFSGY--------GMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLY 80 (223)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGS--------CEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEE
T ss_pred CEEEcCCCcEEEEEEecCcccCCc--------eEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEE
Confidence 46789999999999998764 23 59999842 000 0 1237
Q ss_pred EEEecCCCCCCEEEEEEEEeCCC------CcEEEEEEEEec----CCEEEeCCCceEEEecCCcEEEEeeeecc-cCC-e
Q psy6361 53 FVINNIAEKDTNVYTCTVSNAAG------STSKTIQMNVLV----PPFFKDEQQESVAIVVNHPMNISCSHYGV-PTP-D 120 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~~~------~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~-~ 120 (148)
|.|.+++.+|+|.|.|.+.+..+ .....+.|.|.. +|.+... .+...+.+|+.+.|.|.+.+. |.| .
T Consensus 81 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~-~~~~~~~~g~~v~L~C~~~g~~P~p~~ 159 (223)
T 1dee_B 81 LQMNSLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPL-VSCENSNPSSTVAVGCLAQDFLPDSIT 159 (223)
T ss_dssp EEECSCCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEE-ECTTCCCSSSEEEEEEEEEEEBSSCCE
T ss_pred EEECCCCHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEe-cCCcccCCCCcEEEEEEEEEEeCCCeE
Confidence 99999999999999999998652 112334677762 4554432 212234678999999999886 776 9
Q ss_pred EEEEE-CCEEee
Q psy6361 121 FSWYK-DGSLLR 131 (148)
Q Consensus 121 ~~W~~-~g~~l~ 131 (148)
+.|++ ||..+.
T Consensus 160 v~W~~~~g~~l~ 171 (223)
T 1dee_B 160 FSWKYKNNSDIS 171 (223)
T ss_dssp EEEEETTSCBCS
T ss_pred EEeEccCCCccc
Confidence 99999 988774
No 194
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.61 E-value=6.3e-15 Score=96.13 Aligned_cols=115 Identities=15% Similarity=0.191 Sum_probs=77.6
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EEe---------------------------cCCceEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LYV---------------------------TRNGSFV 54 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~~---------------------------~~~~~l~ 54 (148)
...+..|+.+.|.|.+.+...+. ..+.|||.. ... .....|.
T Consensus 9 ~v~v~~G~~v~L~C~~~~~~~~~------~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 82 (253)
T 3liz_H 9 GGLVQPGGSLKLSCAASGFTFSS------FAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQ 82 (253)
T ss_dssp CCEECTTCCEEEEEEEESSCGGG------SCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEE
T ss_pred CEEECCCCcEEEEEEeeCccccC------ceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEE
Confidence 46788999999999997632111 158998842 000 1123499
Q ss_pred EecCCCCCCEEEEEEEEeCC----CCcEEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEeeeec-ccCC-eEEEE
Q psy6361 55 INNIAEKDTNVYTCTVSNAA----GSTSKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCSHYG-VPTP-DFSWY 124 (148)
Q Consensus 55 i~~~~~~d~g~y~C~~~~~~----~~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~-~~~W~ 124 (148)
|.+++.+|+|.|.|.+.+.. ........|.|. .+|.+... .....+.+|+.+.|.|.+.+ .|.+ .+.|+
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~ 161 (253)
T 3liz_H 83 MSSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPL-APGSAAQTNSMVTLGCLVKGYFPEPVTVTWN 161 (253)
T ss_dssp ECSCCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEE-CC------CCEEEEEEEEEEEBSSCCEEEEG
T ss_pred ECCCChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEe-cCCcccCCCCcEEEEEEEeeEeCCCeEEEEE
Confidence 99999999999999998752 222333567775 45666544 34445667999999999987 6766 89999
Q ss_pred ECCE
Q psy6361 125 KDGS 128 (148)
Q Consensus 125 ~~g~ 128 (148)
++|.
T Consensus 162 ~~~~ 165 (253)
T 3liz_H 162 SGSL 165 (253)
T ss_dssp GGTB
T ss_pred eCCe
Confidence 9987
No 195
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.61 E-value=3.9e-15 Score=99.78 Aligned_cols=110 Identities=12% Similarity=0.135 Sum_probs=82.5
Q ss_pred EeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe------------cCCceEEEecCCCCCCEEEEEEEEeCCCC-
Q psy6361 10 AMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV------------TRNGSFVINNIAEKDTNVYTCTVSNAAGS- 76 (148)
Q Consensus 10 ~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~------------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~- 76 (148)
+..|+.+.|.|.+.+ +.+ .+.|+|++... .....|.|.+++.+|+|.|+|.+.|..+.
T Consensus 130 v~~G~~v~L~C~~~~-~~~--------~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~ 200 (316)
T 3vh8_G 130 VKSGERVILQCWSDI-MFE--------HFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPY 200 (316)
T ss_dssp EETTCCEEEEEEESS-CCS--------EEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTT
T ss_pred cCCCCeEEEEEcCCC-CCc--------EEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCc
Confidence 678999999999853 333 68999987111 13457999999999999999999998663
Q ss_pred ----cEEEEEEEEe---cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEee
Q psy6361 77 ----TSKTIQMNVL---VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLR 131 (148)
Q Consensus 77 ----~~~~~~l~v~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~ 131 (148)
.+....|.|. .+|.+... +. ..+.+|+.+.|.|.+. .|.+.+.|+|+|..+.
T Consensus 201 ~~s~~s~~~~l~V~~~~~~p~i~~~-~~-~~v~~G~~v~L~C~~~-~~~~~~~W~k~g~~~~ 259 (316)
T 3vh8_G 201 QLSAPSDPLDIVVTGPYEKPSLSAQ-PG-PKVQAGESVTLSCSSR-SSYDMYHLSREGGAHE 259 (316)
T ss_dssp BCCCCCCCEEEEEECSSCCCEEEEE-SC-SCCCTTSCCEEEEEES-SCCSEEEEEETTSSCC
T ss_pred cccCCCCCEEEEecCCCCCCeEEeC-CC-CeecCCCcEEEEEECC-CCCcEEEEEECCCcCC
Confidence 2445566665 34555544 33 3568899999999987 4678999999998765
No 196
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.61 E-value=2.5e-15 Score=96.35 Aligned_cols=114 Identities=11% Similarity=0.120 Sum_probs=81.7
Q ss_pred eeeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeCC-----EE----------------------e-----cCCce
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDL-----LY----------------------V-----TRNGS 52 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~-----~~----------------------~-----~~~~~ 52 (148)
...+..|+.+.|.|.+.+.+ .+ .+.|+|.. .. . .....
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~--------~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 80 (225)
T 1op3_H 9 GGLVKAGGSLILSCGVSNFRISAH--------TMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVY 80 (225)
T ss_dssp CEEEETTCCEEEEEEEESSCGGGS--------CEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEE
T ss_pred CeEecCCCCEEEEEEecCcccCCc--------eEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEE
Confidence 45789999999999998765 34 59999842 00 0 01247
Q ss_pred EEEecCCCCCCEEEEEEEEeCCC-----C---cEEEEEEEEec----CCEEEeCCCceEEEecCCcEEEEeeeecc-cCC
Q psy6361 53 FVINNIAEKDTNVYTCTVSNAAG-----S---TSKTIQMNVLV----PPFFKDEQQESVAIVVNHPMNISCSHYGV-PTP 119 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~~~-----~---~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~ 119 (148)
|.|.+++.+|+|.|.|.+.+..+ . ....+.|.|.. +|.+... .+...+.+|+.+.|.|.+.|. |.|
T Consensus 81 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~-~~~~~~~~g~~v~L~C~~~g~~P~p 159 (225)
T 1op3_H 81 LQMHKMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPL-APSSKSTSGGTAALGCLVKDYFPEP 159 (225)
T ss_dssp EEECSCCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEE-CCCTTCCCCCEEEEEEEEEEEBSSC
T ss_pred EEECCCChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEe-cccccccCCCcEEEEEEEEeEECCC
Confidence 99999999999999999998753 1 11345677764 3555433 212234678999999999886 766
Q ss_pred -eEEEEECCEE
Q psy6361 120 -DFSWYKDGSL 129 (148)
Q Consensus 120 -~~~W~~~g~~ 129 (148)
.+.|++++..
T Consensus 160 ~~v~W~~~~~~ 170 (225)
T 1op3_H 160 VTVSWNSGALT 170 (225)
T ss_dssp CEEECCTTSCC
T ss_pred eEEEEecCCCc
Confidence 9999999875
No 197
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.61 E-value=1.9e-15 Score=96.40 Aligned_cols=119 Identities=19% Similarity=0.247 Sum_probs=81.8
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE---------------------ec------CCceEEEecCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY---------------------VT------RNGSFVINNIA 59 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~---------------------~~------~~~~l~i~~~~ 59 (148)
...+..|+.+.|.|.+.+.+.. +.....+.|++++.. .. ....|.|.+++
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~---~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~ 80 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGF---SLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVR 80 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTC---CTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCC
T ss_pred CEEEECCCCeEEEEEecCCCCC---CCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcc
Confidence 3567899999999999876531 011237999997500 00 15679999999
Q ss_pred CCCCEEEEEEEEeCCCCcEEEEEEEEecC---CEEEeCCCceEEEecCCcEEEEeee-ecccCCeEEEEE-CCEEee
Q psy6361 60 EKDTNVYTCTVSNAAGSTSKTIQMNVLVP---PFFKDEQQESVAIVVNHPMNISCSH-YGVPTPDFSWYK-DGSLLR 131 (148)
Q Consensus 60 ~~d~g~y~C~~~~~~~~~~~~~~l~v~~~---p~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~~~W~~-~g~~l~ 131 (148)
.+|+|.|+|.+.+.. ..+..+.|.|..+ |.+... + ...+.+|+.+.|.|.+ .+.|.+.+.|++ ++..+.
T Consensus 81 ~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~p~i~~~-~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~ 154 (222)
T 4i0k_A 81 VTDEGSYTCFVSIQD-FDSAAVSLQVAAPYSKPSMTLE-P-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLT 154 (222)
T ss_dssp GGGCSCEEEEEEECC-CCCCCCCCCCCBCCCCCEEECC-C------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCC
T ss_pred cccCEEEEEEEEeCC-CceEEEEEEEEcCCCCCcEEeC-C-CceecCCceEEEEEecccccCCCeEEEEcCCCccCC
Confidence 999999999999753 3334445555533 555544 3 3467789999999998 888999999999 555544
No 198
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.60 E-value=1.8e-15 Score=97.24 Aligned_cols=115 Identities=11% Similarity=0.169 Sum_probs=81.3
Q ss_pred eeeEeeeccceeeeeecccCC----CCcCCCCccEEEEeeCC-----E---E------------------e-----cCCc
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNL----PQSRNPGQVIKRYLKDL-----L---Y------------------V-----TRNG 51 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~----p~~~~~~~~~v~W~~~~-----~---~------------------~-----~~~~ 51 (148)
...+..|+.+.|.|.+.+.+. + .+.|+|.. . . . ....
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~~--------~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 80 (228)
T 3bae_H 9 PGLLKPSQTLSLTCSFSGFSIRTSKV--------GVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMV 80 (228)
T ss_dssp CSEECTTCCEEEEEEEESSCHHHHCC--------EEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEE
T ss_pred ceeecCCCeEEEEEEEeCcccCCCce--------eEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeE
Confidence 467899999999999988663 4 69998842 0 0 0 0125
Q ss_pred eEEEecCCCCCCEEEEEEEEeCCC------C---cEEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEeeeecc-c
Q psy6361 52 SFVINNIAEKDTNVYTCTVSNAAG------S---TSKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCSHYGV-P 117 (148)
Q Consensus 52 ~l~i~~~~~~d~g~y~C~~~~~~~------~---~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p 117 (148)
.|.|.+++.+|+|.|.|.+.+..+ . ....+.|.|. .+|.+... ++...+.+|+.+.|.|.+.|. |
T Consensus 81 ~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~-~~~~~~~~g~~~~l~C~~~g~~P 159 (228)
T 3bae_H 81 FMKITSVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPL-APVCGDTTGSSVTLGCLVKGYFP 159 (228)
T ss_dssp EEEECSCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEE-CC-----CCSEEEEEEEEEEEBS
T ss_pred EEEEcCCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEe-cccccccCCCCEEEEEEEccEeC
Confidence 799999999999999999988653 1 1123567776 34665544 333446789999999999886 7
Q ss_pred CC-eEEEEECCEEe
Q psy6361 118 TP-DFSWYKDGSLL 130 (148)
Q Consensus 118 ~~-~~~W~~~g~~l 130 (148)
.| .+.|++++..+
T Consensus 160 ~p~~v~W~~~~~~~ 173 (228)
T 3bae_H 160 EPVTLTWNSGSLSS 173 (228)
T ss_dssp SCCEEEEGGGTCCT
T ss_pred CCEEEEEeeCCccc
Confidence 77 99999988753
No 199
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.60 E-value=4.9e-16 Score=100.73 Aligned_cols=114 Identities=13% Similarity=0.067 Sum_probs=80.1
Q ss_pred Eeeeccceeeeeeccc---CCCCcCCCCccEEEEeeCCEEec----------------CCceEEEecCCCCCCEEEEEEE
Q psy6361 10 AMLLDLIPMHSRYNYT---NLPQSRNPGQVIKRYLKDLLYVT----------------RNGSFVINNIAEKDTNVYTCTV 70 (148)
Q Consensus 10 ~~~g~~~~l~C~~~~~---~~p~~~~~~~~~v~W~~~~~~~~----------------~~~~l~i~~~~~~d~g~y~C~~ 70 (148)
+..|+.+.|.|.+.+. |.+. .+.|+|++.... ....|.|.++..+|+|.|+|.+
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~-------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~ 101 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEV-------RFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKV 101 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCC-------EEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEE
T ss_pred cccCCcEEEEEEEecCccCCCCC-------EEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEE
Confidence 5689999999999876 4443 699999861111 1136888888999999999999
Q ss_pred EeCCCCcE--EEEEE--EEecCCEEEeCCCceEEEecCCcEEEEeeeecc-cC-CeEEEEECCEEee
Q psy6361 71 SNAAGSTS--KTIQM--NVLVPPFFKDEQQESVAIVVNHPMNISCSHYGV-PT-PDFSWYKDGSLLR 131 (148)
Q Consensus 71 ~~~~~~~~--~~~~l--~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-~~~~W~~~g~~l~ 131 (148)
.+..+... ..+.+ .+..+|.+... +.......|+.+.|.|.+.|. |. ..+.|+|||..+.
T Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~P~v~v~-~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 167 (239)
T 1i1c_A 102 NSGAFPAPIEKSISKPEGTPRGPQVYTM-APPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQE 167 (239)
T ss_dssp ECSSSSSCEEEEECCCSSCCBCCEEEEE-CCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred ecccCCCCcEEEEecCCCCCcCCEEEEE-CCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECC
Confidence 99877532 22222 23356766544 322222357789999999884 54 4899999999875
No 200
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.60 E-value=1.6e-14 Score=92.25 Aligned_cols=116 Identities=14% Similarity=0.187 Sum_probs=80.0
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E----Ee-------------------------cCCce
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L----YV-------------------------TRNGS 52 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~----~~-------------------------~~~~~ 52 (148)
...+..|+.+.|.|.+.+.+.+. ..+.|||.. . .. .....
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~------~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 82 (221)
T 3m8o_H 9 GGLVQPGGSLKLSCAASGFTLSG------SNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAF 82 (221)
T ss_dssp CEEECTTCCEEEEEEEESSCGGG------SEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEE
T ss_pred CEEEcCCCCEEEEEEcccccccc------cEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEE
Confidence 35688999999999998743211 269999742 0 00 11125
Q ss_pred EEEecCCCCCCEEEEEEEEeCC--CCcEEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEeeeec-ccC-C-eEEE
Q psy6361 53 FVINNIAEKDTNVYTCTVSNAA--GSTSKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCSHYG-VPT-P-DFSW 123 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~~--~~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~-~-~~~W 123 (148)
|.|.+++.+|+|.|.|.+.+.. ........|.|. .+|.+....+... .+|+.+.|.|.+.+ .|. + .+.|
T Consensus 83 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~v~W 160 (221)
T 3m8o_H 83 LQMNSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLSVTW 160 (221)
T ss_dssp EEECSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEEEEE
T ss_pred EEECCCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEEEEE
Confidence 9999999999999999998864 223344566665 3455542202222 68899999999987 665 3 8999
Q ss_pred EECCEEe
Q psy6361 124 YKDGSLL 130 (148)
Q Consensus 124 ~~~g~~l 130 (148)
+++|..+
T Consensus 161 ~~~g~~~ 167 (221)
T 3m8o_H 161 SESGQGV 167 (221)
T ss_dssp SCCSTTC
T ss_pred EECCEEC
Confidence 9999776
No 201
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.60 E-value=1.4e-14 Score=94.85 Aligned_cols=112 Identities=11% Similarity=0.087 Sum_probs=85.5
Q ss_pred eeEeeeccceeeeeecc-cCCCCcCCCCccEEEEeeCCE-----EecCCceEEEecC---CCCCCEE--EEEEEEeCCCC
Q psy6361 8 EQAMLLDLIPMHSRYNY-TNLPQSRNPGQVIKRYLKDLL-----YVTRNGSFVINNI---AEKDTNV--YTCTVSNAAGS 76 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~-~~~p~~~~~~~~~v~W~~~~~-----~~~~~~~l~i~~~---~~~d~g~--y~C~~~~~~~~ 76 (148)
..+..|+.+.|.|.+.+ .|.|. ..+.|+|++. .......+.+..+ ..+|+|. |+|.+.|..+.
T Consensus 13 ~~v~~G~~v~l~C~~~g~~p~p~------~~v~W~k~~~~l~~~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~ 86 (265)
T 2oz4_A 13 RVLEVDTQGTVVCSLDGLFPVSE------AQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQS 86 (265)
T ss_dssp SEEETTEEEEEEEEEESCSCGGG------CEEEEEETTEECCCEEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEE
T ss_pred ceEecCCCEEEEEEccCCCCCcc------eEEEEEeCCEECCceEeeCCCeEEEEeecccccccCCcceEEEEEecCCCC
Confidence 45788999999999998 56551 2699999982 2334456666666 7788885 99999999888
Q ss_pred cEEEEEEEEec--CCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeec
Q psy6361 77 TSKTIQMNVLV--PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 77 ~~~~~~l~v~~--~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~ 132 (148)
......|.|.. +|.+. +....+.+|+.+.|.|.+. |.+.+.| +|..+..
T Consensus 87 ~~~~~~l~V~~~p~p~~~---~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~ 137 (265)
T 2oz4_A 87 QETLQTVTIYSFPAPNVI---LTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQP 137 (265)
T ss_dssp EEEEEEEEEECCCCCEEE---ESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSC
T ss_pred cEEEEEEEEeCCCCceee---cCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccC
Confidence 77788888875 34444 3355688999999999988 8899999 8887743
No 202
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.60 E-value=3.4e-15 Score=95.47 Aligned_cols=114 Identities=12% Similarity=0.167 Sum_probs=82.0
Q ss_pred eeeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeCC-----EE----------------------e-----cCCce
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDL-----LY----------------------V-----TRNGS 52 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~-----~~----------------------~-----~~~~~ 52 (148)
...+..|+.+.|.|.+.+.+ .+ .+.|||.. .. . .....
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~--------~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 80 (220)
T 2fbj_H 9 GGLVQPGGSLKLSCAASGFDFSKY--------WMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLY 80 (220)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGS--------CEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEE
T ss_pred CeEecCCCcEEEEEEecCccCCCc--------eEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEE
Confidence 46788999999999998754 33 59998842 00 0 01237
Q ss_pred EEEecCCCCCCEEEEEEEEeCCCC---cEEEEEEEEec----CCEEEeCCCceEEEecCCcEEEEeeeecc-cC--CeEE
Q psy6361 53 FVINNIAEKDTNVYTCTVSNAAGS---TSKTIQMNVLV----PPFFKDEQQESVAIVVNHPMNISCSHYGV-PT--PDFS 122 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~~~~---~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~--~~~~ 122 (148)
|.|.+++.+|+|.|.|.+.+..+. ....+.|.|.. +|.+... + ...+.+|+.+.|.|.+.+. |. +.+.
T Consensus 81 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~-~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~ 158 (220)
T 2fbj_H 81 LQMSKVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPL-T-LPPALSSDPVIIGCLIHDYFPSGTMNVT 158 (220)
T ss_dssp EEECSCCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEE-C-CCSSSCCSSEEEEEEEEEEBSCCCEEEE
T ss_pred EEECCCChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEe-e-cccccCCCcEEEEEEEEeEECCCcEEEE
Confidence 999999999999999999986542 12335677763 4555443 2 2234678999999999886 66 6999
Q ss_pred EEECCEEe
Q psy6361 123 WYKDGSLL 130 (148)
Q Consensus 123 W~~~g~~l 130 (148)
|++++..+
T Consensus 159 W~~~~~~~ 166 (220)
T 2fbj_H 159 WGKSGKDI 166 (220)
T ss_dssp ESCCCSSC
T ss_pred EecCCEec
Confidence 99998765
No 203
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.60 E-value=4.5e-14 Score=94.92 Aligned_cols=117 Identities=15% Similarity=0.252 Sum_probs=88.2
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-------------------------EE----ecCCceEEEe
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-------------------------LY----VTRNGSFVIN 56 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-------------------------~~----~~~~~~l~i~ 56 (148)
....+..|+.+.|.|.+.+.+.+ .....+.|++++ .. ......|.|.
T Consensus 22 ~~~~v~~G~~v~L~C~~~~~~~~----~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 97 (331)
T 3u83_A 22 DSMYGFIGTDVVLHCSFANPLPS----VKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLS 97 (331)
T ss_dssp EEEEEETTCCEEECCBCSSCCSS----CEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEEEC
T ss_pred CcEEEEecCCEEEeeecCCCCCC----CceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEEEc
Confidence 45788999999999999876221 011269999942 00 1134679999
Q ss_pred cCCCCCCEEEEEE-EEeCCCCcEEEEEEEEecCCEEEeC-CCceEEEecC---CcEEEEee-eecccCCeEEEEEC
Q psy6361 57 NIAEKDTNVYTCT-VSNAAGSTSKTIQMNVLVPPFFKDE-QQESVAIVVN---HPMNISCS-HYGVPTPDFSWYKD 126 (148)
Q Consensus 57 ~~~~~d~g~y~C~-~~~~~~~~~~~~~l~v~~~p~~~~~-~~~~~~~~~g---~~~~l~C~-~~g~p~~~~~W~~~ 126 (148)
+++.+|+|.|+|. +.+..+.....+.|.|..+|.+... .+....+.+| +.+.|.|. ..+.|.|.+.|+++
T Consensus 98 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~ 173 (331)
T 3u83_A 98 RLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETR 173 (331)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEES
T ss_pred ccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcC
Confidence 9999999999998 5555666777788888888876432 1566778888 77999998 88999999999995
No 204
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.60 E-value=1.8e-15 Score=105.72 Aligned_cols=115 Identities=11% Similarity=0.113 Sum_probs=80.6
Q ss_pred EeeeccceeeeeecccC--CCCcCCCCccEEEEeeCCEEec----------------CCceEEEecCCCCCCEEEEEEEE
Q psy6361 10 AMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDLLYVT----------------RNGSFVINNIAEKDTNVYTCTVS 71 (148)
Q Consensus 10 ~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~~~~~----------------~~~~l~i~~~~~~d~g~y~C~~~ 71 (148)
+..|+.+.|.|.+.+.+ +|. +.++|+|++.... ....|.|.++..+|+|.|+|.+.
T Consensus 252 ~~~G~~~~L~C~~~g~~~~p~~------~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~ 325 (444)
T 1igt_B 252 LMISLSPIVTCVVVDVSEDDPD------VQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVN 325 (444)
T ss_dssp HCTTSCCEEEEEEEEECTTCCC------CEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEE
T ss_pred eecCCCcEEEEEEeecccCCCC------eEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEE
Confidence 36799999999999874 221 1799999973221 12368899999999999999999
Q ss_pred eCCCCcEEEEEE----EEecCCEEEeCCCceEEEecCCcEEEEeeeec-ccCC-eEEEEECCEEee
Q psy6361 72 NAAGSTSKTIQM----NVLVPPFFKDEQQESVAIVVNHPMNISCSHYG-VPTP-DFSWYKDGSLLR 131 (148)
Q Consensus 72 ~~~~~~~~~~~l----~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~-~~~W~~~g~~l~ 131 (148)
|..+.......+ .+..+|.+... +.......+..+.|.|.+.| .|.+ .+.|+|||..+.
T Consensus 326 n~~~~~~~~~~v~~~~~~~~~P~v~~~-~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 390 (444)
T 1igt_B 326 NKDLPAPIERTISKPKGSVRAPQVYVL-PPPEEEMTKKQVTLTCMVTDFMPEDIYVEWTNNGKTEL 390 (444)
T ss_dssp CTTCSSCEEEEEECCCCCCBCCEEEEE-CCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred cCCCCCceEEEEeccCCCCCCCEEEEe-CCChHHccCCeEEEEEEEEeeeCCCCEEEEEECCEEcc
Confidence 988765222233 33467776654 32211223445999999988 4655 899999998874
No 205
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.59 E-value=1.9e-15 Score=99.85 Aligned_cols=118 Identities=12% Similarity=0.234 Sum_probs=82.1
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EE----e----------------------cCCceEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LY----V----------------------TRNGSFVI 55 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~----~----------------------~~~~~l~i 55 (148)
...+..|+.+.|.|.+.+.+.+ .+.|+|++ .. . .....|.|
T Consensus 33 ~v~v~~G~~v~L~C~~~~~~~~--------~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (279)
T 2wbj_D 33 WVISKSGTSVKIECRSLDFQAT--------TMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTV 104 (279)
T ss_dssp EEEEETTSCEEEEEEESSSCEE--------EEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEE
T ss_pred eEEecCCCeEEEEEEeCCCCCC--------eEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEE
Confidence 4678999999999999776655 69999852 00 0 01237999
Q ss_pred ecCCCCCCEEEEEEEEeCCC----C--cEEEEEEEEec------CCEEEeCCCceEEEecCCcEEEEeeeecc-cC-CeE
Q psy6361 56 NNIAEKDTNVYTCTVSNAAG----S--TSKTIQMNVLV------PPFFKDEQQESVAIVVNHPMNISCSHYGV-PT-PDF 121 (148)
Q Consensus 56 ~~~~~~d~g~y~C~~~~~~~----~--~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-~~~ 121 (148)
.+++.+|+|.|+|.+.+..+ . ......|.|.. +|.+....+....+.+|+.+.|.|.+.|. |. +.+
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v 184 (279)
T 2wbj_D 105 TSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVEL 184 (279)
T ss_dssp SSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEEE
T ss_pred ccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcEE
Confidence 99999999999999998421 1 12234566653 45554331222223468899999999886 43 699
Q ss_pred EEEECCEEeec
Q psy6361 122 SWYKDGSLLRI 132 (148)
Q Consensus 122 ~W~~~g~~l~~ 132 (148)
.|++||..+..
T Consensus 185 ~W~k~g~~l~~ 195 (279)
T 2wbj_D 185 SWWVNGKEVHS 195 (279)
T ss_dssp EEEETTEECCT
T ss_pred EEEECCEECCC
Confidence 99999998754
No 206
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.59 E-value=7e-15 Score=95.83 Aligned_cols=119 Identities=14% Similarity=0.215 Sum_probs=81.5
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E--------------------Ee----cCCceEEE
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L--------------------YV----TRNGSFVI 55 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~--------------------~~----~~~~~l~i 55 (148)
.....+..|+.+.|.|.+.. +.+ .+.|++.. . .. .....|.|
T Consensus 10 p~~v~v~~G~~v~L~C~~~~-~~~--------~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I 80 (252)
T 1oga_E 10 PKYLFRKEGQNVTLSCEQNL-NHD--------AMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTV 80 (252)
T ss_dssp CSEEEEETTCCEEECCEECS-CCS--------EEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEE
T ss_pred CCeEEEcCCCcEEEEEEeCC-CCC--------EEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEE
Confidence 34578999999999999853 333 69999852 0 00 11247999
Q ss_pred ecCCCCCCEEEEEEEEeCC---CCcEEEEEEEEe------cCCEEEeCCCceEEEecCCcEEEEeeeecc-cCC-eEEEE
Q psy6361 56 NNIAEKDTNVYTCTVSNAA---GSTSKTIQMNVL------VPPFFKDEQQESVAIVVNHPMNISCSHYGV-PTP-DFSWY 124 (148)
Q Consensus 56 ~~~~~~d~g~y~C~~~~~~---~~~~~~~~l~v~------~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~-~~~W~ 124 (148)
.+++.+|+|.|.|.+.+.. ........|.|. .+|.+....+....+.+|+.+.|.|.+.|. |.+ .+.|+
T Consensus 81 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~ 160 (252)
T 1oga_E 81 TSAQKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 160 (252)
T ss_dssp CSCCSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CcCChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEE
Confidence 9999999999999998852 111223356664 355554431222233468899999999885 654 89999
Q ss_pred ECCEEeec
Q psy6361 125 KDGSLLRI 132 (148)
Q Consensus 125 ~~g~~l~~ 132 (148)
+||..+..
T Consensus 161 ~~g~~l~~ 168 (252)
T 1oga_E 161 VNGKEVHS 168 (252)
T ss_dssp ETTEEECS
T ss_pred ECCEECCC
Confidence 99998754
No 207
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.58 E-value=2.1e-14 Score=94.21 Aligned_cols=111 Identities=12% Similarity=0.135 Sum_probs=80.2
Q ss_pred eeeEeeeccceeeeeecccC------CCCcCCCCccEEEEeeCC-----EEe--------------------cCCceEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN------LPQSRNPGQVIKRYLKDL-----LYV--------------------TRNGSFVI 55 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~------~p~~~~~~~~~v~W~~~~-----~~~--------------------~~~~~l~i 55 (148)
...+..|+.+.|.|.+.+.+ .+ .+.|+|+. ... .....|.|
T Consensus 14 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~--------~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I 85 (264)
T 2gjj_A 14 SLPVSVGEKVTMTCKSSQTLLYSNNQKN--------YLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTI 85 (264)
T ss_dssp EEEEETTCCEEEEEEESSCCEETTTTEE--------CEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEE
T ss_pred eEEecCCCcEEEEeEcCCcccccccCCc--------eEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEE
Confidence 45788999999999998876 34 59999842 100 11247999
Q ss_pred ecCCCCCCEEEEEEEEeCCCC-cEEEEEEEEecCC------------------EE-EeCCCceEEEecCCcEEEEeeeec
Q psy6361 56 NNIAEKDTNVYTCTVSNAAGS-TSKTIQMNVLVPP------------------FF-KDEQQESVAIVVNHPMNISCSHYG 115 (148)
Q Consensus 56 ~~~~~~d~g~y~C~~~~~~~~-~~~~~~l~v~~~p------------------~~-~~~~~~~~~~~~g~~~~l~C~~~g 115 (148)
.++..+|+|.|.|.+.+..+. ......|.|..+| .+ ... +....+.+|+++.|.|.+.+
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~~ 164 (264)
T 2gjj_A 86 GSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQ-SGPEVVKTGASVKISCKASG 164 (264)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEE-CCCEEECTTCCEEEEEEEES
T ss_pred CCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeC-CCCEEEcCCCcEEEEEEEeC
Confidence 999999999999999886542 2233567776543 12 122 33457889999999999988
Q ss_pred ccC--CeEEEEEC
Q psy6361 116 VPT--PDFSWYKD 126 (148)
Q Consensus 116 ~p~--~~~~W~~~ 126 (148)
.+. +.+.|||+
T Consensus 165 ~~~~~~~v~W~r~ 177 (264)
T 2gjj_A 165 YSFTGYFINWVKK 177 (264)
T ss_dssp SCGGGSEEEEEEE
T ss_pred CccCCeEEEEEEE
Confidence 763 79999986
No 208
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.57 E-value=4.8e-14 Score=96.94 Aligned_cols=116 Identities=14% Similarity=0.110 Sum_probs=82.2
Q ss_pred Eeeeccceeeeeeccc-CCCCcCCCCccEEEEeeCCEEe-----------c-----CCceEEEecCCCCCCEEEEEEEEe
Q psy6361 10 AMLLDLIPMHSRYNYT-NLPQSRNPGQVIKRYLKDLLYV-----------T-----RNGSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 10 ~~~g~~~~l~C~~~~~-~~p~~~~~~~~~v~W~~~~~~~-----------~-----~~~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
+.+|+.+.|.|.+.+. |.|. ...+.|++++... . ....|.|..+..+|+|.|+|.+.+
T Consensus 180 ~~~g~~v~L~C~~~g~~P~p~-----~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~ 254 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKDDP-----EVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNS 254 (376)
T ss_pred eeeCCeeEEEEEEeccccCCC-----ccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEec
Confidence 7789999999999877 2221 1269999986111 0 122688889999999999999998
Q ss_pred CCCCcE--EEEEE--EEecCCEEEeCCCceEEEecCCcEEEEeeeecc-c-CCeEEEEECCEEee
Q psy6361 73 AAGSTS--KTIQM--NVLVPPFFKDEQQESVAIVVNHPMNISCSHYGV-P-TPDFSWYKDGSLLR 131 (148)
Q Consensus 73 ~~~~~~--~~~~l--~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p-~~~~~W~~~g~~l~ 131 (148)
...... ..+.+ .+..+|.+... +......+|+.+.|.|.+.|. | .+.+.|+|||..+.
T Consensus 255 ~~~~~~~~~~v~~~~~~~~~P~v~v~-~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~ 318 (376)
T 2aty_A 255 AAFPAPIEKTISKTKGRPKAPQLYTI-PPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAE 318 (376)
T ss_pred CCCCCceEEEEcCCCCCCcCCeEEee-CCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECC
Confidence 766422 22222 33467777766 544444568899999999885 3 45899999998764
No 209
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.57 E-value=1.1e-14 Score=95.51 Aligned_cols=115 Identities=12% Similarity=0.170 Sum_probs=81.3
Q ss_pred eeeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeCC-----EEe---------------------------cCCce
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDL-----LYV---------------------------TRNGS 52 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~-----~~~---------------------------~~~~~ 52 (148)
...+..|+.+.|.|.+.+.+ .+ .+.|+|+. ... .....
T Consensus 15 ~~~v~~G~~v~L~C~~~~~~~~~~--------~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 86 (261)
T 2xqy_G 15 AELVKPGASVKMSCKASGYSFTSY--------WMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVY 86 (261)
T ss_dssp EEEECTTCCEEEEEEEESSCGGGS--------CEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEE
T ss_pred CEEEcCCCCEEEEEEeCCcccCCc--------eEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEE
Confidence 45788999999999998765 34 59999862 100 01247
Q ss_pred EEEecCCCCCCEEEEEEEEeCCCC---cEEEEEEEEec----CCEEEeCCCceEEEecCCcEEEEeeeecc-cCC-eEEE
Q psy6361 53 FVINNIAEKDTNVYTCTVSNAAGS---TSKTIQMNVLV----PPFFKDEQQESVAIVVNHPMNISCSHYGV-PTP-DFSW 123 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~~~~---~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~-~~~W 123 (148)
|.|.+++.+|+|.|.|.+.+..+. ....+.|.|.. +|.+... .+...+.+|+.+.|.|.+.+. |.+ .+.|
T Consensus 87 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~-~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W 165 (261)
T 2xqy_G 87 IQLSSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPL-APVCGDTTGSSVTLGCLVKGYFPEPVTLTW 165 (261)
T ss_dssp EEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEE-CCCCC--CCSEEEEEEEEEEEBSSCCEEEE
T ss_pred EEEcCCCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEe-CCCccccCCCcEEEEEEEEeEeCCCCEEEE
Confidence 999999999999999999986431 12335677763 4555543 222345679999999999875 766 9999
Q ss_pred EECCEEe
Q psy6361 124 YKDGSLL 130 (148)
Q Consensus 124 ~~~g~~l 130 (148)
++++..+
T Consensus 166 ~k~g~~~ 172 (261)
T 2xqy_G 166 NSGSLSS 172 (261)
T ss_dssp GGGTCCT
T ss_pred ecCCCcC
Confidence 9998764
No 210
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.56 E-value=6.7e-15 Score=99.00 Aligned_cols=117 Identities=9% Similarity=0.052 Sum_probs=78.1
Q ss_pred EeeeccceeeeeecccC-CCCcCCCCccEEEEeeCC-EEe---------cC------CceEEEecCCCCCCEEEEEEEEe
Q psy6361 10 AMLLDLIPMHSRYNYTN-LPQSRNPGQVIKRYLKDL-LYV---------TR------NGSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 10 ~~~g~~~~l~C~~~~~~-~p~~~~~~~~~v~W~~~~-~~~---------~~------~~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
+..|+.+.|.|.+.+.+ .|. ...+.|+|++ ... .. ...|.|.++..+|+|.|+|.+.|
T Consensus 125 v~~G~~v~L~C~~~g~~P~p~-----~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n 199 (323)
T 2wqr_A 125 LFIRKSPTITCLVVDLAPSKG-----TVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTH 199 (323)
T ss_dssp HHTSSCCEEEEEEEEECCCSS-----CCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEEC
T ss_pred hccCCeEEEEEEEeccCCCCC-----ceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEEC
Confidence 55699999999998764 340 0169999964 110 11 12689999999999999999999
Q ss_pred CCCCcEEEEEEE----EecCCEEEeCCCceEEEecCCcEEEEeeeecc-cCC-eEEEEECCEEeec
Q psy6361 73 AAGSTSKTIQMN----VLVPPFFKDEQQESVAIVVNHPMNISCSHYGV-PTP-DFSWYKDGSLLRI 132 (148)
Q Consensus 73 ~~~~~~~~~~l~----v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~-~~~W~~~g~~l~~ 132 (148)
..........+. +..+|.+... +.......|+.+.|.|.+.|. |.+ .+.|+|||..+..
T Consensus 200 ~~~~~~~~~~v~~~~~~~~~P~v~~~-~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~ 264 (323)
T 2wqr_A 200 PHLPRALMRSTTKTSGPRAAPEVYAF-ATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPD 264 (323)
T ss_dssp TTSSSCEEEEECCCCSCCBCCEEEEE-ECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCG
T ss_pred CCCCCCeeeEEEccCCCCCCCEEEEe-CCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCC
Confidence 764332222222 1245665543 222222348999999999884 443 7999999998864
No 211
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.56 E-value=7e-15 Score=96.30 Aligned_cols=115 Identities=11% Similarity=0.098 Sum_probs=75.0
Q ss_pred eeeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeCC-----EE---e------------------------cCCce
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDL-----LY---V------------------------TRNGS 52 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~-----~~---~------------------------~~~~~ 52 (148)
...+..|+.+.|.|.+.+.+ .+ .+.|||.. .. . .....
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~--------~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 80 (257)
T 3bn9_D 9 GGLVKPGGSLRLSCAASGFTFSSY--------AMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLY 80 (257)
T ss_dssp CEEECTTCEEEEEEEEESSCGGGC--------CEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEE
T ss_pred CEEEcCCCcEEEEEEeccccCCCc--------eEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEE
Confidence 35788999999999998764 33 59998852 00 0 01237
Q ss_pred EEEecCCCCCCEEEEEEEEeCCC----------C---cEEEEEEEEec----CCEEEeCCCceEEEecCCcEEEEeeeec
Q psy6361 53 FVINNIAEKDTNVYTCTVSNAAG----------S---TSKTIQMNVLV----PPFFKDEQQESVAIVVNHPMNISCSHYG 115 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~~~----------~---~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~g 115 (148)
|.|.+++.+|+|.|.|.+.+..+ . ....+.|.|.. +|.+... .+...+.+|+.+.|.|.+.|
T Consensus 81 L~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~-~p~~~~~~g~~v~L~C~~~g 159 (257)
T 3bn9_D 81 LQMSSLRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPL-APSSKSTSGGTAALGCLVKD 159 (257)
T ss_dssp EEEESCCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCC-CC-----------CCCEEEE
T ss_pred EEECCCChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEe-cCcccccCCCcEEEEEEEee
Confidence 99999999999999999998653 1 11234677763 4665544 33334678899999999988
Q ss_pred c-cCC-eEEEEECCEEe
Q psy6361 116 V-PTP-DFSWYKDGSLL 130 (148)
Q Consensus 116 ~-p~~-~~~W~~~g~~l 130 (148)
. |.| .+.|+++|..+
T Consensus 160 ~~P~pi~v~W~k~g~~~ 176 (257)
T 3bn9_D 160 YFPEPVTVSWNSGALTS 176 (257)
T ss_dssp EBSSCCEEEETTTTCCS
T ss_pred EECCCcEEEEeeCCCcC
Confidence 6 777 99999998763
No 212
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.56 E-value=2.9e-14 Score=82.20 Aligned_cols=80 Identities=14% Similarity=0.103 Sum_probs=65.1
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE-----------ecCCceEEEecCCCCCCEEEEEEEEeC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY-----------VTRNGSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~-----------~~~~~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
.....+..|+.+.|.|.+.+.+.| .+.|+|++.. ......|.|.++..+|+|.|+|.+.|.
T Consensus 14 ~~~~~v~~G~~v~l~C~~~g~p~p--------~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 85 (114)
T 2cqv_A 14 PEDQKVRAGESVELFGKVTGTQPI--------TCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENK 85 (114)
T ss_dssp CCSEEEETTCCEEEEEEEESSSSC--------EEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECS
T ss_pred CCCeEEeCCCeEEEEEEEEcCCCC--------EEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEEC
Confidence 345678899999999999998888 6999998711 112467999999999999999999999
Q ss_pred CCCcEEEEEEEEecCCEEE
Q psy6361 74 AGSTSKTIQMNVLVPPFFK 92 (148)
Q Consensus 74 ~~~~~~~~~l~v~~~p~~~ 92 (148)
.+.....+.|.|...|...
T Consensus 86 ~g~~~~~~~l~V~~~p~~P 104 (114)
T 2cqv_A 86 LGSRQAQVNLTVVDKPDPP 104 (114)
T ss_dssp SCEEECCEEEEEECSCSCC
T ss_pred CCcEEEEEEEEEECCCCCC
Confidence 9987778888888665443
No 213
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.56 E-value=6e-14 Score=90.42 Aligned_cols=117 Identities=13% Similarity=0.187 Sum_probs=77.7
Q ss_pred eeeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeCC-----EE---------------------ec-----CCceE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDL-----LY---------------------VT-----RNGSF 53 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~-----~~---------------------~~-----~~~~l 53 (148)
...+..|+.+.|.|.+.+.+ .+ .+.|||.. .. .. ....|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~--------~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 80 (232)
T 1dn0_B 9 AGLLKPSETLSLTCAVYGGSFSDY--------YWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSL 80 (232)
T ss_dssp CCEECTTSCEEEEEEEESSCCSSC--------CEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEE
T ss_pred CEEEeCCCcEEEEEEEccccCCCc--------eEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEE
Confidence 35788999999999998764 23 59998842 00 00 12279
Q ss_pred EEecCCCCCCEEEEEEEEe--CCC----CcEEEEEEEEec----CCEEEeCCCceEEEecC-CcEEEEeeeecc-cCC-e
Q psy6361 54 VINNIAEKDTNVYTCTVSN--AAG----STSKTIQMNVLV----PPFFKDEQQESVAIVVN-HPMNISCSHYGV-PTP-D 120 (148)
Q Consensus 54 ~i~~~~~~d~g~y~C~~~~--~~~----~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g-~~~~l~C~~~g~-p~~-~ 120 (148)
.|.+++.+|+|.|.|.+.+ ..+ .......|.|.. +|.+... .+...+.+| +.+.|.|.+.+. |.| .
T Consensus 81 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~-~p~~~~~~g~~~v~L~C~~~g~~P~p~~ 159 (232)
T 1dn0_B 81 KLSSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPL-VSCENSPSDTSSVAVGCLAQDFLPDSIT 159 (232)
T ss_dssp EECSCCGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEE-ECC------CCSEEEEEEEEEEBSSCCE
T ss_pred EECCCCcccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEe-ccccccCCCCCcEEEEEEEEEEeCCCeE
Confidence 9999999999999999983 211 122345677764 3555433 222334578 899999999876 776 9
Q ss_pred EEEEE-CCEEeec
Q psy6361 121 FSWYK-DGSLLRI 132 (148)
Q Consensus 121 ~~W~~-~g~~l~~ 132 (148)
+.|++ ||..+..
T Consensus 160 v~W~~~~g~~l~~ 172 (232)
T 1dn0_B 160 FSWKYKNNSDISS 172 (232)
T ss_dssp EEEEETTSCEECC
T ss_pred EEEEcCCCCceee
Confidence 99999 9987643
No 214
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.56 E-value=3.1e-15 Score=96.40 Aligned_cols=116 Identities=11% Similarity=0.113 Sum_probs=77.8
Q ss_pred Eeeeccceeeeeeccc-CC-CCcCCCCccEEEEeeCCEEe----------cCC------ceEEEecCCCCCCEEEEEEEE
Q psy6361 10 AMLLDLIPMHSRYNYT-NL-PQSRNPGQVIKRYLKDLLYV----------TRN------GSFVINNIAEKDTNVYTCTVS 71 (148)
Q Consensus 10 ~~~g~~~~l~C~~~~~-~~-p~~~~~~~~~v~W~~~~~~~----------~~~------~~l~i~~~~~~d~g~y~C~~~ 71 (148)
+..|+.+.|.|.+.+. |. |. .+.|++++... ..+ ..|.|.++..+|+|.|+|.+.
T Consensus 25 v~~G~~v~L~C~~~g~~P~~p~-------~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~ 97 (231)
T 2w59_A 25 LYISLDAKLRCLVVNLPSDSSL-------SVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQ 97 (231)
T ss_dssp HHTSCCCEEEEEEEEESCCTTC-------EEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEE
T ss_pred cccCCceEEEEEEeCccCCCCe-------EEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEEE
Confidence 4579999999999885 43 43 69999987211 111 258888888999999999999
Q ss_pred eCCCCcEEEEEEEE----ecCCEEEeCCCceEEEecCCcEEEEeeeecc-c-CCeEEEEECCEEeecC
Q psy6361 72 NAAGSTSKTIQMNV----LVPPFFKDEQQESVAIVVNHPMNISCSHYGV-P-TPDFSWYKDGSLLRIQ 133 (148)
Q Consensus 72 ~~~~~~~~~~~l~v----~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p-~~~~~W~~~g~~l~~~ 133 (148)
+..+.......+.+ ..+|.+....+.... ..+..+.|.|.+.|. | .+.+.|+|||..+...
T Consensus 98 ~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~-~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 164 (231)
T 2w59_A 98 HEELPLPLSKSVYRNTGPTTPPLIYPFAPHPEE-LSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPAT 164 (231)
T ss_dssp CTTCSSCEEEEECCCCSCCBCCEEEEECCCGGG-GGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGG
T ss_pred cCCCCCceEEEEecCCCCCcCCEEEEeCCCHHH-hccCceEEEEEEEeccCCCcEEEEEECCEECCCc
Confidence 97754333222221 135655433121111 235579999999885 4 3689999999988543
No 215
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.56 E-value=1.2e-14 Score=92.13 Aligned_cols=114 Identities=18% Similarity=0.242 Sum_probs=73.6
Q ss_pred eeeccceeeeeecccCC--CCcCCCCccEEEEeeCCEEe----------cCCceEEEec---CCCCC---CEEEEEEEEe
Q psy6361 11 MLLDLIPMHSRYNYTNL--PQSRNPGQVIKRYLKDLLYV----------TRNGSFVINN---IAEKD---TNVYTCTVSN 72 (148)
Q Consensus 11 ~~g~~~~l~C~~~~~~~--p~~~~~~~~~v~W~~~~~~~----------~~~~~l~i~~---~~~~d---~g~y~C~~~~ 72 (148)
..|+.+.|.|.+.+.++ |. +.+.|+|++... ..+..+.+.. +...| +|.|+|.+.|
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~------~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n 89 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPE------VKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSN 89 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCC------CEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEEC
T ss_pred ecCCceEEEEEEecccCCCCC------eEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEc
Confidence 57999999999987653 21 279999997221 1123344332 33444 9999999999
Q ss_pred CCCCcEEEEEE----EEecCCEEEeCCCceEEEecCCcEEEEeeeecc-cC-CeEEEEECCEEee
Q psy6361 73 AAGSTSKTIQM----NVLVPPFFKDEQQESVAIVVNHPMNISCSHYGV-PT-PDFSWYKDGSLLR 131 (148)
Q Consensus 73 ~~~~~~~~~~l----~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-~~~~W~~~g~~l~ 131 (148)
..+.......+ .+..+|.+... +.......|..+.|.|.+.|. |. +.+.|++||..+.
T Consensus 90 ~~~~~~~~~~v~~~~~~~~~P~v~~~-~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~ 153 (207)
T 1l6x_A 90 KALPAPIEKTISKAKGQPREPQVYTL-PPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPEN 153 (207)
T ss_dssp TTSSSCEEEEECCCCSCCBCCEEEEE-CCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred CcCCcceEEEeccCCCCCcCCEEEEE-CCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeecc
Confidence 87754222223 23356665544 222112346669999999885 54 3899999998875
No 216
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=4.4e-14 Score=79.46 Aligned_cols=75 Identities=21% Similarity=0.353 Sum_probs=62.6
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE---------EecCCceEEEecCCCCCCEEEEEEEEeCCCCc
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL---------YVTRNGSFVINNIAEKDTNVYTCTVSNAAGST 77 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~---------~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 77 (148)
...+..|+.+.|.|.+.+.+.| .+.|++++. ....+..|.|.++..+|+|.|+|.+.|..+..
T Consensus 17 ~~~v~~G~~~~l~C~~~g~p~p--------~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 88 (100)
T 2edj_A 17 NQTLAVDGTALLKCKATGDPLP--------VISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGET 88 (100)
T ss_dssp CEEEESSSEEEECCEEECSSCC--------EEEEEESSSEESSSCSSCEECTTCCEEEESCCTTTCCEEEEEEECSSCCC
T ss_pred CEEEcCCCcEEEEEEEEEcCCC--------EEEEEECCEECCCCCCCEEEcCCCEEEEccCCcccCEEEEEEEEcCCCCE
Confidence 4578899999999999998888 699999872 22345689999999999999999999999887
Q ss_pred EEEEEEEEecCC
Q psy6361 78 SKTIQMNVLVPP 89 (148)
Q Consensus 78 ~~~~~l~v~~~p 89 (148)
...+.|.|..+|
T Consensus 89 ~~~~~l~V~~~~ 100 (100)
T 2edj_A 89 SWSAVLDVTESG 100 (100)
T ss_dssp BCCEEEEEESCC
T ss_pred EEEEEEEEecCC
Confidence 777788876543
No 217
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.56 E-value=1.2e-14 Score=92.63 Aligned_cols=117 Identities=12% Similarity=0.154 Sum_probs=82.1
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E---E------------------ec-----CCceEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L---Y------------------VT-----RNGSFVI 55 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~---~------------------~~-----~~~~l~i 55 (148)
...+..|+.+.|.|.+.+.+.+. ..+.|+|+. . . .. ....|.|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~------~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 82 (215)
T 1c5d_H 9 PGLVQPSQTLSLTCTVSGFPLTT------NGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKM 82 (215)
T ss_dssp CCEECTTCCEEEEEEECSSCTTS------CCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEE
T ss_pred CeeecCCCcEEEEEEECCCcCCC------CeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEE
Confidence 45788999999999998764210 159999852 0 0 00 1237999
Q ss_pred ecCCCCCCEEEEEEEEeCCC---CcEEEEEEEEec----CCEEEeCCCceEEEecCCcEEEEeeeecc-cCC-eEEEEEC
Q psy6361 56 NNIAEKDTNVYTCTVSNAAG---STSKTIQMNVLV----PPFFKDEQQESVAIVVNHPMNISCSHYGV-PTP-DFSWYKD 126 (148)
Q Consensus 56 ~~~~~~d~g~y~C~~~~~~~---~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~-~~~W~~~ 126 (148)
.+++.+|+|.|.|.+.+..+ .....+.|.|.. +|.+... ++...+.+|+.+.|.|.+.|. |.| .+.|+++
T Consensus 83 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~-~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 161 (215)
T 1c5d_H 83 NSLQTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPL-APGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSG 161 (215)
T ss_dssp SSCCGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEE-CCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGG
T ss_pred CCCCcccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEec-cCChhhccCCcEEEEEEEeeeEcCCcEEEEccC
Confidence 99999999999999988642 122335677762 4555433 222234678999999999886 877 9999998
Q ss_pred CEEe
Q psy6361 127 GSLL 130 (148)
Q Consensus 127 g~~l 130 (148)
|..+
T Consensus 162 g~~~ 165 (215)
T 1c5d_H 162 ALSS 165 (215)
T ss_dssp TTCC
T ss_pred CccC
Confidence 8754
No 218
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.55 E-value=6.4e-14 Score=78.73 Aligned_cols=76 Identities=18% Similarity=0.212 Sum_probs=62.0
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec----------CC--ceEEEecCCCCCCEEEEEEEEe
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT----------RN--GSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~----------~~--~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
.....+..|+.+.|.|.+.+.+.| .+.|++++.... .. ..|.|.++..+|+|.|+|.+.|
T Consensus 12 p~~~~~~~G~~~~l~C~~~g~p~p--------~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (100)
T 2kdg_A 12 PENMSIDEGRFCRMDFKVSGLPAP--------DVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKN 83 (100)
T ss_dssp CCCEEEETTCCEEEEEECEEESCC--------EEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEecCCCEEEEEEEEEeeCCC--------EEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEc
Confidence 345678899999999999988887 699999972221 11 3799999999999999999999
Q ss_pred CCCCcEEEEEEEEecC
Q psy6361 73 AAGSTSKTIQMNVLVP 88 (148)
Q Consensus 73 ~~~~~~~~~~l~v~~~ 88 (148)
..+..+..+.|.|..+
T Consensus 84 ~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 84 RAGEATFTVQLDVLAK 99 (100)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred CCCeEEEEEEEEEEec
Confidence 9988777888877643
No 219
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.55 E-value=3e-14 Score=81.21 Aligned_cols=79 Identities=14% Similarity=0.191 Sum_probs=57.1
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC---------EEecCCceEEEecCCCCCCEEEEEEEEeCCC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL---------LYVTRNGSFVINNIAEKDTNVYTCTVSNAAG 75 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~---------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 75 (148)
.....+..|+.+.|.|.+.+.+.| .+.|++++ ........|.|.++..+|+|.|+|.+.|..+
T Consensus 17 ~~~~~v~~G~~v~l~C~~~g~p~p--------~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 88 (108)
T 3kvq_A 17 LENQTTSIGESIEVSCTASGNPPP--------QIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLG 88 (108)
T ss_dssp CCCEEEETTCCEEEECBCC----C--------CEEEEESSSBCCCBTTEEEETTTTEEEECSCCGGGCEEEEEEEC----
T ss_pred CCCeEEeCCCeEEEEEECcCcCCC--------eEEEEECCeEcccCCCeEEeCCCcEEEEeecCcccCEEEEEEEEeCCC
Confidence 345678899999999999988888 59999987 2334567899999999999999999999999
Q ss_pred CcEEEEEEEEecCCEE
Q psy6361 76 STSKTIQMNVLVPPFF 91 (148)
Q Consensus 76 ~~~~~~~l~v~~~p~~ 91 (148)
.....+.|.|..+|..
T Consensus 89 ~~~~~~~l~V~~~~~~ 104 (108)
T 3kvq_A 89 CAKVEAFFIIEGAQEK 104 (108)
T ss_dssp CEEEEEEEEEEC----
T ss_pred ceEEEEEEEEeCCCcc
Confidence 8888888888766543
No 220
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=1.4e-14 Score=84.05 Aligned_cols=79 Identities=18% Similarity=0.134 Sum_probs=64.8
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC---------EEecCCceEEEecCCCCCCEEEEEEEEeCCC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL---------LYVTRNGSFVINNIAEKDTNVYTCTVSNAAG 75 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~---------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 75 (148)
.....+..|+.+.|.|.+.+.+.| .+.|+|++ .....+..|.|.++..+|+|.|+|.+.|..+
T Consensus 15 p~~~~v~~G~~v~l~C~~~g~p~p--------~i~W~k~g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 86 (118)
T 2eo9_A 15 PVNQTVAVDGTFVLSCVATGSPVP--------TILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSG 86 (118)
T ss_dssp CCCEEEETTCEEEEECBCCCSSCC--------EEEEEESSSBCCTTSTTEEEEETTEEEEESCCGGGCCCEEEEEECSSC
T ss_pred CCCEEEcCCCeEEEEEEEEecCCC--------EEEEEECCEECcCCCCeEEEccCCEEEEccCCcCCCEEEEEEEEcCCC
Confidence 345678899999999999988887 69999987 2223456899999999999999999999998
Q ss_pred CcEEEEEEEEecCCEE
Q psy6361 76 STSKTIQMNVLVPPFF 91 (148)
Q Consensus 76 ~~~~~~~l~v~~~p~~ 91 (148)
.....+.|.|...+..
T Consensus 87 ~~~~~~~l~V~~~~~p 102 (118)
T 2eo9_A 87 EATWSAYIEVQEFGVP 102 (118)
T ss_dssp EEEEECCEEEECCSCC
T ss_pred cEEEEEEEEEEeCCCC
Confidence 8777778888765543
No 221
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.55 E-value=2.7e-14 Score=93.78 Aligned_cols=116 Identities=16% Similarity=0.194 Sum_probs=76.5
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EE--------------------ecCCceEEEecCCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LY--------------------VTRNGSFVINNIAEK 61 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~--------------------~~~~~~l~i~~~~~~ 61 (148)
...+..|+.+.|.|.+.+.+... .....+.|+|+. .. ......|.|.+++.+
T Consensus 24 ~~~v~~G~~v~L~C~~~~~~~~~---~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 100 (268)
T 1x9q_A 24 SLPVSLGDQASISCRSSQSLVHS---NGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEAE 100 (268)
T ss_dssp EECCCTTCCEEEEEEESSCCBCT---TSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred eEEecCCCCEEEEeEecCCcccc---cCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCChh
Confidence 35678999999999998876300 000159999842 10 011237999999999
Q ss_pred CCEEEEEEEEeCCCC-cEEEEEEEEecCCE-----------------------EEeCCCceEEEecCCcEEEEeeeeccc
Q psy6361 62 DTNVYTCTVSNAAGS-TSKTIQMNVLVPPF-----------------------FKDEQQESVAIVVNHPMNISCSHYGVP 117 (148)
Q Consensus 62 d~g~y~C~~~~~~~~-~~~~~~l~v~~~p~-----------------------~~~~~~~~~~~~~g~~~~l~C~~~g~p 117 (148)
|+|.|+|.+.+..+. ......|.|...+. .... +....+.+|+.+.|.|.+.+.+
T Consensus 101 DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~-~~~~~v~~G~~v~L~C~~~~~~ 179 (268)
T 1x9q_A 101 DLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDE-TGGGLVQPGGAMKLSCVTSGFT 179 (268)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEE-ECCEEECTTCCEEEEEEEESSC
T ss_pred HCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEEC-CCceEecCCCcEEEEEEecCcc
Confidence 999999999886542 22234556553221 1222 3456788999999999998765
Q ss_pred --CCeEEEEEC
Q psy6361 118 --TPDFSWYKD 126 (148)
Q Consensus 118 --~~~~~W~~~ 126 (148)
.+.+.|||+
T Consensus 180 ~~~~~v~W~k~ 190 (268)
T 1x9q_A 180 FGHYWMNWVRQ 190 (268)
T ss_dssp GGGCEEEEEEE
T ss_pred ccccEEEEEEe
Confidence 378999985
No 222
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.55 E-value=8.6e-15 Score=94.87 Aligned_cols=118 Identities=10% Similarity=0.124 Sum_probs=80.8
Q ss_pred ceeeeEeeeccceeeeeeccc--CCCCcCCCCccEEEEeeCC-----EEe---------------c------------CC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYT--NLPQSRNPGQVIKRYLKDL-----LYV---------------T------------RN 50 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~--~~p~~~~~~~~~v~W~~~~-----~~~---------------~------------~~ 50 (148)
.....+..|+.+.|.|.+.+. +.+ .+.|+|.. ... . ..
T Consensus 8 p~~v~~~~G~~v~L~C~~~~~~~~~~--------~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 79 (242)
T 1hxm_B 8 QISSTKTLSKTARLECVVSGITISAT--------SVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETST 79 (242)
T ss_dssp CSEEEEETTCCEEEEEEEESSCTTTS--------CEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTE
T ss_pred CceEEecCCCcEEEEEEeCCccccCc--------eEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcE
Confidence 446788999999999999875 333 59999842 000 0 12
Q ss_pred ceEEEecCCCCCCEEEEEEEEeCCC-C------cEEEEEEEEecC-------CEEEeCCCceEEEecCCcEEEEeeeecc
Q psy6361 51 GSFVINNIAEKDTNVYTCTVSNAAG-S------TSKTIQMNVLVP-------PFFKDEQQESVAIVVNHPMNISCSHYGV 116 (148)
Q Consensus 51 ~~l~i~~~~~~d~g~y~C~~~~~~~-~------~~~~~~l~v~~~-------p~~~~~~~~~~~~~~g~~~~l~C~~~g~ 116 (148)
..|.|.+++.+|+|.|.|.+.+... . ......|.|... |......+....+.+|+.+.|.|.+.|.
T Consensus 80 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~ 159 (242)
T 1hxm_B 80 STLTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKF 159 (242)
T ss_dssp EEEEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEE
T ss_pred EEEEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeE
Confidence 4699999999999999999987531 1 122456777642 3333221222234468999999999886
Q ss_pred -cC-CeEEEEECCE-Ee
Q psy6361 117 -PT-PDFSWYKDGS-LL 130 (148)
Q Consensus 117 -p~-~~~~W~~~g~-~l 130 (148)
|. +.+.|+++|. .+
T Consensus 160 ~P~~~~v~W~~~~~~~l 176 (242)
T 1hxm_B 160 FPDVIKIHWEEKKSNTI 176 (242)
T ss_dssp SSCCEEEEEEESSSCCC
T ss_pred ECCCeEEEEEcCCCEee
Confidence 64 6899999986 45
No 223
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.54 E-value=3.1e-14 Score=97.35 Aligned_cols=95 Identities=17% Similarity=0.230 Sum_probs=60.3
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE-----------EecCCceEEEecCCCCCCEEEEEEEEeCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL-----------YVTRNGSFVINNIAEKDTNVYTCTVSNAAG 75 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~-----------~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 75 (148)
...+..|+.+.|.|.+.+ |.| .+.|++++. .......|.|.+++.+|+|.|+|.|.|..+
T Consensus 255 ~v~v~~G~~~~l~C~~~g-p~p--------~i~W~~~~~~~~~~~~~~~r~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g 325 (361)
T 2xot_A 255 AWEAHLGDTLTIRCDTKQ-QGM--------TKVWVSPSNEQVLSQGSNGSVSVRNGDLFFKKVQVEDGGVYTCYAMGETF 325 (361)
T ss_dssp CCEEETTCCEEECCCCSS-TTC--------EEEEECTTSCBCCSCCSSSSEEEETTEEEESSCCTTSCEEEEEEEECSSC
T ss_pred CceecCCCeEEEEeEeeC-CCC--------eEEEEeCCCeeEeecccCCceEeecCeEEEeecCcccCEEEEEEEecCCC
Confidence 457899999999999988 766 699999651 111346899999999999999999999988
Q ss_pred CcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEE
Q psy6361 76 STSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFS 122 (148)
Q Consensus 76 ~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~ 122 (148)
..+..+.+.|...+ .+|+.+.+.|.+.|.|.|.+.
T Consensus 326 ~~~~~~~l~V~~~~------------~~g~~~~l~C~~~g~P~P~i~ 360 (361)
T 2xot_A 326 NETLSVELKVYNFT------------LHGHHDTLNAAADPWSHPQFE 360 (361)
T ss_dssp EEEEEEEEEEESSC------------CC-------------------
T ss_pred ccEEEEEEEEEeee------------ccCCceEEEEEeCCCCCCccc
Confidence 87777777774322 467789999999999988763
No 224
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=5.4e-14 Score=81.53 Aligned_cols=76 Identities=13% Similarity=0.125 Sum_probs=62.9
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec----------CCceEEEecCCCCCCEEEEEEEEeCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT----------RNGSFVINNIAEKDTNVYTCTVSNAAG 75 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~----------~~~~l~i~~~~~~d~g~y~C~~~~~~~ 75 (148)
....+..|+.+.|.|.+.+.|.| .+.|+|++.... ....|.|.++..+|+|.|+|.+.|..+
T Consensus 32 ~~~~v~~G~~~~l~C~~~g~P~p--------~i~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G 103 (118)
T 2e7c_A 32 QTYIRKVGEQLNLVVPFQGKPRP--------QVVWTKGGAPLDTSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENM 103 (118)
T ss_dssp SCEEEESSSCEEEEEEEEEESCC--------EEEEEETTEECCCSSCEEEECSSEEEEEESSCCTTTCEEEEEEEECSSC
T ss_pred CCEEEECCCEEEEEEEEccCCCC--------EEEEEECCEECCCCcEEEEECCCeEEEEECCCChhcCEEEEEEEEeCCC
Confidence 45678889999999999999988 699999973221 124599999999999999999999999
Q ss_pred CcEEEEEEEEecCC
Q psy6361 76 STSKTIQMNVLVPP 89 (148)
Q Consensus 76 ~~~~~~~l~v~~~p 89 (148)
.....+.|.|..+|
T Consensus 104 ~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 104 KDTATIRIRVVEKA 117 (118)
T ss_dssp EECCEEEEEEECCC
T ss_pred eEEEEEEEEEEcCC
Confidence 87777888887655
No 225
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.54 E-value=1.8e-14 Score=101.06 Aligned_cols=114 Identities=12% Similarity=0.119 Sum_probs=83.1
Q ss_pred eeeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeCC-----EEe---------------------------cCCce
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDL-----LYV---------------------------TRNGS 52 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~-----~~~---------------------------~~~~~ 52 (148)
...+..|+.+.|.|.+.+.+ .+ .+.|+|+. ... .....
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~--------~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 80 (457)
T 1hzh_H 9 AEVKKPGASVKVSCQASGYRFSNF--------VIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAY 80 (457)
T ss_dssp CEEECTTCCEEECEEEESSCGGGS--------CEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEE
T ss_pred ceEEcCCCCEEEEEEecCccccCc--------EEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEE
Confidence 45789999999999998765 34 59999841 000 01137
Q ss_pred EEEecCCCCCCEEEEEEEEeCCC------------CcEEEEEEEEec----CCEEEeCCCceEEEecCCcEEEEeeeecc
Q psy6361 53 FVINNIAEKDTNVYTCTVSNAAG------------STSKTIQMNVLV----PPFFKDEQQESVAIVVNHPMNISCSHYGV 116 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~~~------------~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~g~ 116 (148)
|.|.+++.+|+|.|+|.+.+..+ .......|.|.. +|.+... +....+.+|+.+.|.|.+.|.
T Consensus 81 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~~g~~v~L~C~~~g~ 159 (457)
T 1hzh_H 81 MELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPL-APSSKSTSGGTAALGCLVKDY 159 (457)
T ss_dssp EEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEE-CCCSCCCTTCCEEEEEEEESB
T ss_pred EEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEec-CccccccCCCcEEEEEEEeEE
Confidence 99999999999999999998754 222345677764 5655544 333346789999999999887
Q ss_pred -cC-CeEEEEECCEE
Q psy6361 117 -PT-PDFSWYKDGSL 129 (148)
Q Consensus 117 -p~-~~~~W~~~g~~ 129 (148)
|. +.+.|++++..
T Consensus 160 ~P~~~~v~W~k~~~~ 174 (457)
T 1hzh_H 160 FPEPVTVSWNSGALT 174 (457)
T ss_dssp BSCCCEEEETTTTBC
T ss_pred eCCCeEEEEEeCCEe
Confidence 64 79999999954
No 226
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.54 E-value=4.4e-14 Score=93.91 Aligned_cols=111 Identities=14% Similarity=0.234 Sum_probs=80.6
Q ss_pred eeeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeCC-----EE-----------------------e----cCCce
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDL-----LY-----------------------V----TRNGS 52 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~-----~~-----------------------~----~~~~~ 52 (148)
...+..|+.+.|.|.+.+.+ .+ .+.|+|+. .. . .....
T Consensus 31 ~~~v~~G~~v~L~C~~~~~~~~~~--------~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 102 (291)
T 2gki_A 31 PELVKPGASVKMSCKASGYTFTSY--------VMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAY 102 (291)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGS--------CEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEE
T ss_pred cEEecCCCCEEEEEeccCCccccc--------EEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEE
Confidence 45788999999999998765 34 59999842 00 0 01246
Q ss_pred EEEecCCCCCCEEEEEEEEeCC-CC----cEEEEEEEEec----------------CCEEEeCCCceEEEecCCcEEEEe
Q psy6361 53 FVINNIAEKDTNVYTCTVSNAA-GS----TSKTIQMNVLV----------------PPFFKDEQQESVAIVVNHPMNISC 111 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~~-~~----~~~~~~l~v~~----------------~p~~~~~~~~~~~~~~g~~~~l~C 111 (148)
|.|.+++.+|+|.|.|.+.+.. +. ......|.|.. ++.+... +....+.+|+.+.|.|
T Consensus 103 L~I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~-p~~~~v~~G~~v~L~C 181 (291)
T 2gki_A 103 MELSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQS-PSSLAVSAGEKVTMSC 181 (291)
T ss_dssp EEECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECS-CSEEEEETTSCEEEEE
T ss_pred EEECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcC-CCEEEEcCCCcEEEEE
Confidence 9999999999999999999864 11 11234666665 2334444 5667899999999999
Q ss_pred eeecccCC------eEEEEEC
Q psy6361 112 SHYGVPTP------DFSWYKD 126 (148)
Q Consensus 112 ~~~g~p~~------~~~W~~~ 126 (148)
.+.+.+.+ .+.|||+
T Consensus 182 ~~~~~~~~~~~~~~~v~W~k~ 202 (291)
T 2gki_A 182 KSSQSLFNSRTRKNYLAWYQQ 202 (291)
T ss_dssp EESSCCEETTTTEECEEEEEE
T ss_pred EcCCccccccccceeEEEEEE
Confidence 99887765 8999985
No 227
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.54 E-value=3.6e-14 Score=78.85 Aligned_cols=73 Identities=11% Similarity=0.043 Sum_probs=60.8
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC--EEe---------cCCceEEEecCCCCCCEEEEEEEEeC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL--LYV---------TRNGSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~--~~~---------~~~~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
.....+..|+.+.|.|.+.+.|.| .+.|+|++ ... .....|.|.++..+|+|.|+|.+.|.
T Consensus 9 ~~~~~v~~G~~~~l~C~~~g~P~p--------~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~ 80 (93)
T 1wit_A 9 SRKIKIKAGFTHNLEVDFIGAPDP--------TATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVKNE 80 (93)
T ss_dssp CCEEEECTTBCCEEEEEEECCSSC--------EEEEECSTTTCBCSTTSEEEEETTEEEEECTTBCGGGCEEEEEEEEET
T ss_pred CCceEEeCCCEEEEEEEEEEcCCC--------EEEEEECCCCcccCCcEEEEecCCEEEEEECCCChhcCEEEEEEEEcC
Confidence 456788999999999999999998 69999987 221 22356999999999999999999999
Q ss_pred CCCcEEEEEEEE
Q psy6361 74 AGSTSKTIQMNV 85 (148)
Q Consensus 74 ~~~~~~~~~l~v 85 (148)
.|..+..+.|.|
T Consensus 81 ~G~~~~~~~l~V 92 (93)
T 1wit_A 81 LGEDEAIFEVIV 92 (93)
T ss_dssp TEEEEEEEEEEE
T ss_pred CCeEEEEEEEEE
Confidence 998777777665
No 228
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.53 E-value=8e-14 Score=80.67 Aligned_cols=79 Identities=19% Similarity=0.257 Sum_probs=64.8
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec----------CC---ceEEEecCCCCCCEEEEEEEE
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT----------RN---GSFVINNIAEKDTNVYTCTVS 71 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~----------~~---~~l~i~~~~~~d~g~y~C~~~ 71 (148)
.....+..|+.+.|.|.+.+.+.| .+.|++++.... .. ..|.|.++..+|+|.|+|.+.
T Consensus 22 p~~~~v~~G~~v~L~C~~~g~p~p--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 93 (116)
T 2kkq_A 22 PQSKKVLEGDSVKLECQISAIPPP--------KLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAV 93 (116)
T ss_dssp CCCEEEETTEEEEEEEEBCCBSCC--------EEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEE
T ss_pred CCcEEEeCCCcEEEEEEEeccCCC--------EEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEE
Confidence 345788999999999999998888 699999972221 11 179999999999999999999
Q ss_pred eCCCCcEEEEEEEEecCCEE
Q psy6361 72 NAAGSTSKTIQMNVLVPPFF 91 (148)
Q Consensus 72 ~~~~~~~~~~~l~v~~~p~~ 91 (148)
|..+.....+.|.|..+|..
T Consensus 94 N~~G~~~~~~~l~V~~~p~~ 113 (116)
T 2kkq_A 94 NEAGVTTCNTRLDVTARPNQ 113 (116)
T ss_dssp ETTEEEEEEEEEEEECCSCC
T ss_pred cCCCeEEEEEEEEEeCCCCC
Confidence 99998888888888876643
No 229
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.53 E-value=1e-13 Score=91.59 Aligned_cols=109 Identities=10% Similarity=0.107 Sum_probs=77.4
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC--EEe----cCCceEEEecCCCCCCEEEEEEEEeCCCC-cEEE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL--LYV----TRNGSFVINNIAEKDTNVYTCTVSNAAGS-TSKT 80 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~--~~~----~~~~~l~i~~~~~~d~g~y~C~~~~~~~~-~~~~ 80 (148)
..+..|+.+.|.|.+. .+.| .+.|++.+ ... .....+. ...|+|.|+|.+.+..+. .+..
T Consensus 105 ~~v~~G~~v~l~C~~~-~p~~--------~v~w~~~~~~~~~~~~~~~~~~~~----~~~d~G~Y~C~a~n~~~~~~s~~ 171 (289)
T 3mjg_X 105 IFLTEITEITIPCRVT-DPQL--------VVTLHEKKGDVALPVPYDHQRGFS----GIFEDRSYICKTTIGDREVDSDA 171 (289)
T ss_dssp EEESSCCCEEECCCBS-CTTS--------CEEEEESSCCSCCCCCEETTTEEE----ECCCSSEEEEEEEETTEEEECCC
T ss_pred EEeecCCeEEEEeEcC-CCCc--------eEEEEeCCCCCccceeecCCcCee----eeccCcEEEEEEEeCCceeeeee
Confidence 5578899999999998 4555 47887763 111 1111221 367999999999976654 3333
Q ss_pred EEEEEec--CCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEe
Q psy6361 81 IQMNVLV--PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLL 130 (148)
Q Consensus 81 ~~l~v~~--~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l 130 (148)
..+.+.. +|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+++++..
T Consensus 172 ~~l~v~~~~~p~i~~~-~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~ 222 (289)
T 3mjg_X 172 YYVYRLQVSSINVSVN-AVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKES 222 (289)
T ss_dssp EEEEECCCCCCCCEEE-ESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSS
T ss_pred EEEEecCCCCCCcEEe-CCcceeEcCCCEEEEEEECCCCCcceEEEcCCccC
Confidence 4566654 5666655 55677899999999999999999999999876543
No 230
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.53 E-value=2.6e-15 Score=99.23 Aligned_cols=115 Identities=14% Similarity=0.068 Sum_probs=85.2
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC---EEec---CCceEEEecCCCCCCEEEEEEEEeCCCCcEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL---LYVT---RNGSFVINNIAEKDTNVYTCTVSNAAGSTSK 79 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~---~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 79 (148)
....+..|+.+.|.|.+.+. +.|++++ .... ....|.|.+++.+|+|.|+|.+.+..+..+.
T Consensus 12 ~~~~v~~G~~v~L~C~~~~~------------v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~ 79 (292)
T 4dkd_C 12 PELVVKPGATVTLRCVGNGS------------VEWDGPPSPHWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPLGGSA 79 (292)
T ss_dssp SSCEECTTCCEEEEEECSSC------------CCBCCCCCSSCEECCBTTEEEEEESSCCGGGCSCEEECCCC----CCE
T ss_pred CeEEEcCCCcEEEEEcCCCc------------eEEccCCCCceEEeccCceEEEEEcccccccCEEEEEEEccCCCCcce
Confidence 34578899999999998762 6798765 1122 2358999999999999999999988777777
Q ss_pred EEEEEEecCCEE-EeCCCceEEEecCCcEEEEeeeeccc-CCeEEEEEC-CEEeecC
Q psy6361 80 TIQMNVLVPPFF-KDEQQESVAIVVNHPMNISCSHYGVP-TPDFSWYKD-GSLLRIQ 133 (148)
Q Consensus 80 ~~~l~v~~~p~~-~~~~~~~~~~~~g~~~~l~C~~~g~p-~~~~~W~~~-g~~l~~~ 133 (148)
.+.|.|..+|.. ... +....+.+|+.+.|.|.+.+.+ .+.+.|+++ +..+...
T Consensus 80 ~~~l~V~~~~~~~~~~-~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~~~~~~~~ 135 (292)
T 4dkd_C 80 AIHLYVKDPARPWNVL-AQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRH 135 (292)
T ss_dssp EECCEECCSSCCEEES-CSEEEEETTSCEECCEEESSGGGGSSEEEEEGGGCCCCSS
T ss_pred EEEEEEcCcccccccc-CCeEEEcCCCcEEEeeeCCCCCcceeEEEEecCCCccccC
Confidence 788888876653 444 6678899999999999998732 278999987 5555443
No 231
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.53 E-value=8.5e-14 Score=78.09 Aligned_cols=73 Identities=16% Similarity=0.071 Sum_probs=60.1
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE------------ecCCceEEEecCCCCCCEEEEEEEEeC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY------------VTRNGSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~------------~~~~~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
....+..|+.+.|.|.+.+.+.| .+.|++++.. ......|.|.++..+|+|.|+|.+.|.
T Consensus 13 ~~~~v~~G~~v~l~C~~~g~p~p--------~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~ 84 (99)
T 1g1c_A 13 QSQTVGQGSDAHFRVRVVGKPDP--------ECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINI 84 (99)
T ss_dssp CCEEEETTSCEEEEEEEEEESCC--------EEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred cceEEcCCCcEEEEEEEEEeCCC--------EEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEEC
Confidence 45678899999999999998888 6999999721 122347999999999999999999999
Q ss_pred CCCcEEEEEEEEe
Q psy6361 74 AGSTSKTIQMNVL 86 (148)
Q Consensus 74 ~~~~~~~~~l~v~ 86 (148)
.+.....+.|.|.
T Consensus 85 ~g~~~~~~~l~V~ 97 (99)
T 1g1c_A 85 AGETSSHAFLLVQ 97 (99)
T ss_dssp TEEEEEEEEEEEE
T ss_pred CCcEEEEEEEEEe
Confidence 9887777777764
No 232
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.51 E-value=9.5e-14 Score=77.69 Aligned_cols=76 Identities=13% Similarity=0.125 Sum_probs=61.8
Q ss_pred CcceeeeEeeeccceeeeeeccc-CCCCcCCCCccEEEEeeCCEE-----------ecCCceEEEecCCCCCCEEEEEEE
Q psy6361 3 GTMNVEQAMLLDLIPMHSRYNYT-NLPQSRNPGQVIKRYLKDLLY-----------VTRNGSFVINNIAEKDTNVYTCTV 70 (148)
Q Consensus 3 ~~~~~~~~~~g~~~~l~C~~~~~-~~p~~~~~~~~~v~W~~~~~~-----------~~~~~~l~i~~~~~~d~g~y~C~~ 70 (148)
+......+..|+.+.|.|.+.+. |.| .+.|++++.. ......|.|.++..+|+|.|+|.+
T Consensus 6 ~~~~~~~v~~G~~v~l~C~~~g~~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 77 (97)
T 2bk8_A 6 GQIMHAVGEEGGHVKYVCKIENYDQST--------QVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKV 77 (97)
T ss_dssp CCCCCEEECTTCCEEEEEEEESCCTTC--------EEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ccCcCEEEcCCCcEEEEEEEeccCCCC--------EEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEE
Confidence 45567889999999999999997 666 6999998721 112238999999999999999999
Q ss_pred EeCCCCcEEEEEEEEe
Q psy6361 71 SNAAGSTSKTIQMNVL 86 (148)
Q Consensus 71 ~~~~~~~~~~~~l~v~ 86 (148)
.|..+.....+.|.|.
T Consensus 78 ~n~~g~~~~~~~l~V~ 93 (97)
T 2bk8_A 78 VNDYGEDSSYAELFVK 93 (97)
T ss_dssp ECSSCEEEEEEEEEET
T ss_pred ECCCCeEeEEEEEEEE
Confidence 9999887777777765
No 233
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.51 E-value=1.3e-13 Score=77.93 Aligned_cols=74 Identities=9% Similarity=0.042 Sum_probs=61.3
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec-----------CCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT-----------RNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~-----------~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
....+..|+.+.|.|.+.+.|.| .+.|+|++.... ....|.|.++..+|+|.|+|.+.|..
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p--------~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~ 87 (103)
T 3qp3_A 16 RSHRVPCGQNTRFILNVQSKPTA--------EVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNYK 87 (103)
T ss_dssp CCEEEETTCCEEEEEEEEEESCC--------EEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred cceEEeCCCeEEEEEEEEecCCC--------EEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeCC
Confidence 45678899999999999999888 699999972221 22469999999999999999999999
Q ss_pred CCcEEEEEEEEec
Q psy6361 75 GSTSKTIQMNVLV 87 (148)
Q Consensus 75 ~~~~~~~~l~v~~ 87 (148)
+..+..+.|.|..
T Consensus 88 G~~~~~~~l~V~~ 100 (103)
T 3qp3_A 88 GEASDYATLDVTG 100 (103)
T ss_dssp EEEEEEEEEEEEC
T ss_pred CcEEEEEEEEEEC
Confidence 9887777887764
No 234
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.50 E-value=4.4e-13 Score=85.17 Aligned_cols=111 Identities=14% Similarity=0.126 Sum_probs=81.7
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec-------------CCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT-------------RNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~-------------~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
..+..|+.+.|.|.+.+.|.| .+.|+|++.... ....|.|.++..+|+|.|.|.+.|..
T Consensus 28 ~~~~~G~~v~l~C~~~g~p~p--------~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 99 (215)
T 3mtr_A 28 VYTWEGNQVNITCEVFAYPSA--------TISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRI 99 (215)
T ss_dssp EEECTTCCEEEEEEEEEESCC--------EEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSS
T ss_pred EEEECCCCEEEEEEEeecCCC--------EEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECC
Confidence 678889999999999999988 699999982221 24679999999999999999999999
Q ss_pred CCcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeee----cccCC--eEEEEECCEE
Q psy6361 75 GSTSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHY----GVPTP--DFSWYKDGSL 129 (148)
Q Consensus 75 ~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~----g~p~~--~~~W~~~g~~ 129 (148)
+.....+.|.+..+|..... .. ....+..+.+.|... +.|.. .+.|.+++..
T Consensus 100 g~~~~~~~l~v~~~P~~p~~-~~--~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~ 157 (215)
T 3mtr_A 100 GQESLEFILVQADTPSSPSI-DQ--VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEE 157 (215)
T ss_dssp CEEEEEEEEEECCCCCCCEE-EE--EEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCC
T ss_pred CceEEEEEEEECCCCCCCcc-eE--EEEecceEEEEEecCCccCCCceEEEEEEEEECCCC
Confidence 98878888888766554322 11 123456788888632 22332 3678877643
No 235
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.50 E-value=7e-14 Score=98.59 Aligned_cols=116 Identities=12% Similarity=0.089 Sum_probs=82.5
Q ss_pred EeeeccceeeeeecccCC--CCcCCCCccEEEEeeCCEE---------e------cCCceEEEecCCCCCCEEEEEEEEe
Q psy6361 10 AMLLDLIPMHSRYNYTNL--PQSRNPGQVIKRYLKDLLY---------V------TRNGSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 10 ~~~g~~~~l~C~~~~~~~--p~~~~~~~~~v~W~~~~~~---------~------~~~~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
+..|+.+.|.|.+.+.++ +. .++| +++.. . .....|.|.++..+|+|.|+|.+.|
T Consensus 259 ~~~G~~v~L~C~~~g~~p~~~~-------~i~W-~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n 330 (475)
T 1iga_A 259 LLLGSEANLTCTLTGLRDASGV-------TFTW-TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAY 330 (475)
T ss_pred hccCCceEEEEEEEcccCCCce-------EEEE-CCCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEc
Confidence 478999999999987643 12 6999 44311 0 0123589999999999999999999
Q ss_pred CCCCcEEEEEEE---EecCCEEEeCCCceEEEecCCcEEEEeeeecc-c-CCeEEEEECCEEeecC
Q psy6361 73 AAGSTSKTIQMN---VLVPPFFKDEQQESVAIVVNHPMNISCSHYGV-P-TPDFSWYKDGSLLRIQ 133 (148)
Q Consensus 73 ~~~~~~~~~~l~---v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p-~~~~~W~~~g~~l~~~ 133 (148)
..+.......+. +..+|.+....+....+.+|+.+.|.|.+.|. | .+.+.|+|||..+...
T Consensus 331 ~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 396 (475)
T 1iga_A 331 PESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPRE 396 (475)
T ss_pred CCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCC
Confidence 887644433443 24677766551222346788999999999886 3 3599999999988644
No 236
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.50 E-value=1.2e-13 Score=78.50 Aligned_cols=76 Identities=18% Similarity=0.241 Sum_probs=61.0
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEecC--------C---ceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTR--------N---GSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~~--------~---~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
....+..|+.+.|.|.+.+.+.| .+.|++++..... . ..|.|.++..+|+|.|+|.+.|..
T Consensus 21 ~~~~v~~G~~v~l~C~~~g~p~p--------~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~ 92 (107)
T 3irg_B 21 RPVRVVSGAEAELKCVVLGEPPP--------VVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAA 92 (107)
T ss_dssp CCEEEETTSCEEEEEEEEEESCC--------EEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred ccEEEeCCCeEEEEEEEeecCCC--------EEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEcCC
Confidence 34678889999999999998888 6999998722211 1 279999999999999999999999
Q ss_pred CCcEEEEEEEEecCC
Q psy6361 75 GSTSKTIQMNVLVPP 89 (148)
Q Consensus 75 ~~~~~~~~l~v~~~p 89 (148)
+.....+.|.|..+|
T Consensus 93 g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 93 GEAYAAAAVTVLEPP 107 (107)
T ss_dssp EEEEEEEEEEEEC--
T ss_pred CcEEEEEEEEEEcCC
Confidence 887777888877654
No 237
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.50 E-value=1.3e-13 Score=76.98 Aligned_cols=72 Identities=18% Similarity=0.260 Sum_probs=59.0
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-------EEecCCceEEEecCCCCCCEEEEEEEEeCCCCc
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-------LYVTRNGSFVINNIAEKDTNVYTCTVSNAAGST 77 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 77 (148)
.....+..|+.+.|.|.+.+.+ | .+.|+|++ +.......|.|.++..+|+|.|+|.+.|..+..
T Consensus 16 ~~~~~v~~G~~v~l~C~~~g~p-p--------~i~W~k~g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~ 86 (95)
T 2ckn_A 16 VESLLVHPGDLLQLRCRLRDDV-Q--------SINWLRDGVQLVESNRTRITGEEVEVRDSIPADSGLYACVTSSPSGSD 86 (95)
T ss_dssp BCCEEECTTSCEEEECCEESSC-C--------EEEEEBTTBCCCCCSSEEECSSEEEESSCCGGGSEEEEEEEEETTEEE
T ss_pred cceEEEcCCCeEEEEEECCCCC-C--------ceEEEECCEecCCCCCEEEeCCEEEECCCChHHCEEEEEEeccCCCcE
Confidence 3456788999999999999876 6 69999987 222236789999999999999999999998877
Q ss_pred EEEEEEEE
Q psy6361 78 SKTIQMNV 85 (148)
Q Consensus 78 ~~~~~l~v 85 (148)
...+.|.|
T Consensus 87 ~~~~~l~V 94 (95)
T 2ckn_A 87 TTYFSVNV 94 (95)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 66666655
No 238
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.50 E-value=1.1e-13 Score=78.50 Aligned_cols=73 Identities=12% Similarity=0.076 Sum_probs=59.2
Q ss_pred EeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEecC------------Cc----eEEEecCCCCCCEEEEEEEEeC
Q psy6361 10 AMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTR------------NG----SFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 10 ~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~~------------~~----~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
+..++.+.|.|.+.|.|.| .++|+|++..... .. .|.|.++..+|+|.|+|.|.|.
T Consensus 13 ~~~~~~~~~~c~v~G~P~P--------~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~ 84 (103)
T 1wwb_X 13 PTSDHHWCIPFTVKGNPKP--------ALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNE 84 (103)
T ss_dssp CCCCCEEEEEEEEECSSCC--------EEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECS
T ss_pred ceECcEEEEEEEEEEeCCC--------EEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeC
Confidence 4557778999999999999 6999999822211 12 3999999999999999999999
Q ss_pred CCCcEEEEEEEEecCCE
Q psy6361 74 AGSTSKTIQMNVLVPPF 90 (148)
Q Consensus 74 ~~~~~~~~~l~v~~~p~ 90 (148)
.|.....+.|.|..+|.
T Consensus 85 ~G~~~~~~~l~V~~~P~ 101 (103)
T 1wwb_X 85 YGKDEKQISAHFMGWPG 101 (103)
T ss_dssp SCEEEEEEEECCSCCCC
T ss_pred CCcEeEEEEEEECCCCC
Confidence 99988888888776653
No 239
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.50 E-value=1.3e-13 Score=75.23 Aligned_cols=70 Identities=13% Similarity=0.061 Sum_probs=53.4
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE---------e--cCCceEEEecCCCCCCEEEEEEEEeC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY---------V--TRNGSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~---------~--~~~~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
++...+..|+.+.|.|.+.+ |.| .+.|+|++.. . .....|.|.++..+|+|.|+|.|.
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p--------~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~-- 71 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGG--------PVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAP-- 71 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CST--------TCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECT--
T ss_pred CeEEEEecCCCEEEEEEECC-CCc--------EEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEEC--
Confidence 46788999999999999866 666 4899999811 1 123479999999999999999863
Q ss_pred CCCcEEEEEEEEec
Q psy6361 74 AGSTSKTIQMNVLV 87 (148)
Q Consensus 74 ~~~~~~~~~l~v~~ 87 (148)
..+..+.|.|..
T Consensus 72 --n~~~~a~l~V~e 83 (84)
T 2lu7_A 72 --QDSRIFLVSVEE 83 (84)
T ss_dssp --TTCEEEEEEECC
T ss_pred --CEEEEEEEEEEC
Confidence 345566676653
No 240
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.49 E-value=1.6e-13 Score=77.09 Aligned_cols=72 Identities=21% Similarity=0.355 Sum_probs=59.0
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE------------ecCCceEEEecCCCCCCEEEEEEEEeC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY------------VTRNGSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~------------~~~~~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
....+..|+.+.|.|.+.+.+.| .+.|++++.. ......|.|.++..+|+|.|+|.+.|.
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p--------~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~ 87 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNPMP--------TMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENE 87 (100)
T ss_dssp CEEEECTTCCEEEECCEEEESCC--------EEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEET
T ss_pred cEEEecCCCEEEEEEEccccCCC--------EEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeC
Confidence 35667889999999999998888 6999999722 122347999999999999999999999
Q ss_pred CCCcEEEEEEEE
Q psy6361 74 AGSTSKTIQMNV 85 (148)
Q Consensus 74 ~~~~~~~~~l~v 85 (148)
.+.....+.|.|
T Consensus 88 ~g~~~~~~~l~V 99 (100)
T 3caf_A 88 YGSINHTYHLDV 99 (100)
T ss_dssp TEEEEEEEEEEE
T ss_pred CCEEEEEEEEEE
Confidence 988766666665
No 241
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.49 E-value=6.8e-14 Score=81.47 Aligned_cols=81 Identities=11% Similarity=0.083 Sum_probs=63.0
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE---------------Ee----cCCceEEEecCCCCCCEEEEE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL---------------YV----TRNGSFVINNIAEKDTNVYTC 68 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~---------------~~----~~~~~l~i~~~~~~d~g~y~C 68 (148)
..+..|+.+.|.|.+.+.+.|. +.+.|++++. .. .....|.|.++..+|+|.|+|
T Consensus 18 v~v~~G~~v~L~C~~~g~p~~~------~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 91 (122)
T 3s35_X 18 IELSVGEKLVLNCTARTELNVG------IDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTC 91 (122)
T ss_dssp EEEEETCCEEEEEEEEECTTCC------CEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEE
T ss_pred EEEecCCeEEEEEEEEcCCCCc------EEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEE
Confidence 4788999999999999855431 2699999862 00 123479999999999999999
Q ss_pred EEEeCCCCcEEEEEEEEecCCEEEeC
Q psy6361 69 TVSNAAGSTSKTIQMNVLVPPFFKDE 94 (148)
Q Consensus 69 ~~~~~~~~~~~~~~l~v~~~p~~~~~ 94 (148)
.+.|..+.....+.|.|..+|.+...
T Consensus 92 ~a~n~~g~~~~~~~l~V~~~p~i~~~ 117 (122)
T 3s35_X 92 AASSGLMTKKNSTFVRVHEKPFVAFG 117 (122)
T ss_dssp EEECSSCEEEEEEEEEEEEEECC---
T ss_pred EEccCCCceEEEEEEEEeccCeEEee
Confidence 99999998888889999888877654
No 242
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=1.1e-13 Score=78.08 Aligned_cols=74 Identities=18% Similarity=0.165 Sum_probs=58.2
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec-----------CCceEEEecCCCCCCEEEEEEEEeC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT-----------RNGSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~-----------~~~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
..+..+..|+.+.|.|.+ .+.| .+.|+|++.... ....|.|.++..+|+|.|+|.+.|.
T Consensus 14 ~~~~~v~~G~~v~l~C~v--~p~p--------~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 83 (100)
T 2yuz_A 14 LTDQTVNLGKEICLKCEI--SENI--------PGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY 83 (100)
T ss_dssp CCCEEEETTSCCCEEEEC--SSCC--------CEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS
T ss_pred CCceEEcCCCCEEEEEEe--CCCC--------eEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC
Confidence 456788999999999999 5666 599999982221 1247999999999999999999997
Q ss_pred CCCcEEEEEEEEecCCE
Q psy6361 74 AGSTSKTIQMNVLVPPF 90 (148)
Q Consensus 74 ~~~~~~~~~l~v~~~p~ 90 (148)
..+....|.|..+|.
T Consensus 84 --~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 84 --NVTLPAKVHVISGPS 98 (100)
T ss_dssp --CCCEEEEEEEECCSC
T ss_pred --CeeEEEEEEEeCCCC
Confidence 455667888877664
No 243
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.49 E-value=2.3e-13 Score=77.71 Aligned_cols=73 Identities=16% Similarity=0.203 Sum_probs=59.1
Q ss_pred eeeeEeeeccceeeeeecccCC---CCcCCCCccEEEEeeCCEE-----------e---------cCCceEEEecCCCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNL---PQSRNPGQVIKRYLKDLLY-----------V---------TRNGSFVINNIAEKD 62 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~---p~~~~~~~~~v~W~~~~~~-----------~---------~~~~~l~i~~~~~~d 62 (148)
....+..|+.+.|.|.+.+.+. | .+.|+|++.. . .....|.|.++..+|
T Consensus 12 ~~~~v~~G~~v~L~C~~~g~p~~~~p--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 83 (108)
T 3cx2_A 12 QDGEVTVGGSITFSARVAGASLLKPP--------VVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAF 83 (108)
T ss_dssp CCEEEETTCCEEEEEEEECC-CCSCC--------EEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGG
T ss_pred CcEEEeCCCCEEEEEEECCCccCCCc--------EEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCcc
Confidence 4567899999999999999887 6 6999997510 0 013579999999999
Q ss_pred CEEEEEEEEeCCCCcEEEEEEEEe
Q psy6361 63 TNVYTCTVSNAAGSTSKTIQMNVL 86 (148)
Q Consensus 63 ~g~y~C~~~~~~~~~~~~~~l~v~ 86 (148)
+|.|+|.+.|..|..+..+.|.|.
T Consensus 84 ~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 84 TGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CEEEEEEEecCCCceEEEEEEEEe
Confidence 999999999999988888888764
No 244
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=4.6e-14 Score=79.28 Aligned_cols=72 Identities=18% Similarity=0.167 Sum_probs=59.1
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC--------EEecCCceEEEecCCCCCCEEEEEEEEeCCCCc
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL--------LYVTRNGSFVINNIAEKDTNVYTCTVSNAAGST 77 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~--------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 77 (148)
....+..|+.+.|.|.+.+.|.| .+.|++++ ........|.|.++..+|+|.|+|.+.|..+..
T Consensus 19 ~~~~v~~G~~v~l~C~~~g~p~p--------~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 90 (99)
T 2yr3_A 19 KDCAVIEGQDFVLQCSVRGTPVP--------RITWLLNGQPIQYARSTCEAGVAELHIQDALPEDHGTYTCLAENALGQV 90 (99)
T ss_dssp CCEEECTTCCEEEECEEEEESCC--------CCEEEESSSBCSSCCCEEETTEEEEEECSCCTTCCBCEEEEEECSSCEE
T ss_pred CCCEEeCCCeEEEEEEEeeeCCC--------eEEEEECCEECcccceEeeCCeEEEEECCCChhhCEEEEEEEEECCCeE
Confidence 34668899999999999998888 59999987 222334689999999999999999999999876
Q ss_pred EEEEEEEE
Q psy6361 78 SKTIQMNV 85 (148)
Q Consensus 78 ~~~~~l~v 85 (148)
...+.|.|
T Consensus 91 ~~~~~l~V 98 (99)
T 2yr3_A 91 SCSAWVTV 98 (99)
T ss_dssp EEECCEEE
T ss_pred EEEEEEEE
Confidence 66666654
No 245
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.48 E-value=1.7e-14 Score=100.61 Aligned_cols=114 Identities=17% Similarity=0.245 Sum_probs=82.7
Q ss_pred eeeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeCC----E--E--------------------e------cCCce
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDL----L--Y--------------------V------TRNGS 52 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~----~--~--------------------~------~~~~~ 52 (148)
...+..|+.+.|.|.+.+.+ .+ .+.|+|++ . . . .....
T Consensus 8 ~~~v~~G~~v~L~C~~~~~~~~~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 79 (434)
T 1igy_B 8 AELARPGASVKMSCKASGYTFTTY--------TIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTAN 79 (434)
T ss_dssp CCEECTBCCEEECCEECSSCGGGC--------CCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBC
T ss_pred CeEecCCCCEEEEEEccCCcccCc--------eEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEE
Confidence 45789999999999998764 33 58999852 0 0 0 01237
Q ss_pred EEEecCCCCCCEEEEEEEEeCCCCcEEEEEEEEec----CCEEEeCCCceEEEecCCcEEEEeeeecc-cCC-eEEEEEC
Q psy6361 53 FVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLV----PPFFKDEQQESVAIVVNHPMNISCSHYGV-PTP-DFSWYKD 126 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~-~~~W~~~ 126 (148)
|.|.+++.+|+|.|.|.+.+..+.......|.|.. +|.+... +....+.+|+.+.|.|.+.|. |.| .+.|+++
T Consensus 80 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~ 158 (434)
T 1igy_B 80 IHLSSLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPL-APGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSG 158 (434)
T ss_dssp EEECSBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEE-CCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTT
T ss_pred EEECCCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEc-CCccccCCCCcEEEEEEEeeecCCCeEEEEeeC
Confidence 99999999999999999988544434445677752 4544433 223345789999999999886 776 9999999
Q ss_pred CEE
Q psy6361 127 GSL 129 (148)
Q Consensus 127 g~~ 129 (148)
+..
T Consensus 159 ~~~ 161 (434)
T 1igy_B 159 SLS 161 (434)
T ss_dssp TBC
T ss_pred CcC
Confidence 875
No 246
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.48 E-value=1.6e-13 Score=90.63 Aligned_cols=109 Identities=14% Similarity=0.143 Sum_probs=74.7
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE------e-cC---CceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY------V-TR---NGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~------~-~~---~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
.....+..|+.+.|.|.+.+. +.|++++.. . .. ...|.|.++..+|+|.|+|.+.|..
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~------------v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~ 74 (289)
T 3mjg_X 7 GPELVLNVSSTFVLTCSGSAP------------VVWERMSQEPPQEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSR 74 (289)
T ss_dssp CSEEECCTTCCEEEEEEESSC------------CEEEBTTBCCSEEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC--
T ss_pred CCeEEEeCCCcEEEEEeccce------------EEEECCCCCcccceeccCCCceeEEEEEccCChhhCEEEEEEEcccC
Confidence 345678899999999998652 689998721 1 12 2579999999999999999999877
Q ss_pred CC---cEEEEEEEEecCC--EEEeCCCc--eEEEecCCcEEEEeeeecccCCeEEEEECC
Q psy6361 75 GS---TSKTIQMNVLVPP--FFKDEQQE--SVAIVVNHPMNISCSHYGVPTPDFSWYKDG 127 (148)
Q Consensus 75 ~~---~~~~~~l~v~~~p--~~~~~~~~--~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g 127 (148)
+. ....+.+.+..++ .+... +. ...+.+|+.+.|.|.+. .|.|.+.|++++
T Consensus 75 g~~~~~~~~~~v~v~~p~~~~~~~~-~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~ 132 (289)
T 3mjg_X 75 GLETDERKRLYIFVPDPTVGFLPND-AEELFIFLTEITEITIPCRVT-DPQLVVTLHEKK 132 (289)
T ss_dssp ----CCCEEEEEECCCTTCCBCCCC-HHHHEEEESSCCCEEECCCBS-CTTSCEEEEESS
T ss_pred CCCcCcEEeEEEEEECCCcCcccCC-CCcceEEeecCCeEEEEeEcC-CCCceEEEEeCC
Confidence 65 3334444443222 22111 11 16788999999999998 677889998854
No 247
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.47 E-value=8.6e-14 Score=92.07 Aligned_cols=112 Identities=12% Similarity=0.192 Sum_probs=78.2
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC--------EEec------------------------CCceE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL--------LYVT------------------------RNGSF 53 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~--------~~~~------------------------~~~~l 53 (148)
....+..|+.+.|.|.+.+...+. ..+.|||.. .... ....|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~------~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 81 (280)
T 3fku_X 8 GAEVKKPGSSVKVSCTSSEVTFSS------FAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYM 81 (280)
T ss_dssp CCCEECTTCCEEEEEEECCSCCTT------SCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEE
T ss_pred CCEEECCCCcEEEEEEeeccCCCC------eEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEE
Confidence 456788999999999998753211 159998742 0000 11369
Q ss_pred EEecCCCCCCEEEEEEEEeC---------CCCcEEEEEEEEec---------------CCEEEeCCCceEEEecCCcEEE
Q psy6361 54 VINNIAEKDTNVYTCTVSNA---------AGSTSKTIQMNVLV---------------PPFFKDEQQESVAIVVNHPMNI 109 (148)
Q Consensus 54 ~i~~~~~~d~g~y~C~~~~~---------~~~~~~~~~l~v~~---------------~p~~~~~~~~~~~~~~g~~~~l 109 (148)
.|.+++.+|+|.|.|.+.+. .........|.|.. ++.+... +. ..+.+|+++.|
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~-p~-~~v~~G~~v~L 159 (280)
T 3fku_X 82 DLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQP-PS-VSKGLRQTATL 159 (280)
T ss_dssp EECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCC-SE-EEECTTCCEEE
T ss_pred EECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeC-Cc-EEEecCCCEEE
Confidence 99999999999999999886 11122334566654 3444444 44 88899999999
Q ss_pred Eeeeec-cc-CCeEEEEE
Q psy6361 110 SCSHYG-VP-TPDFSWYK 125 (148)
Q Consensus 110 ~C~~~g-~p-~~~~~W~~ 125 (148)
.|.+.+ .+ .+.+.|||
T Consensus 160 ~C~~~~~~~~~~~v~W~r 177 (280)
T 3fku_X 160 TCTGNSNNVGNQGAAWLQ 177 (280)
T ss_dssp EEECCCCCCCTTCCEEEE
T ss_pred EEEecCCCCCCceEEEEE
Confidence 999887 44 47899997
No 248
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.47 E-value=3.5e-13 Score=80.36 Aligned_cols=74 Identities=16% Similarity=0.262 Sum_probs=60.5
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC----------------------------EEe---------
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL----------------------------LYV--------- 47 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~----------------------------~~~--------- 47 (148)
.....+..|+.+.|.|.+.|.|.| .++|+|++ ...
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P--------~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i 96 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAP--------TVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRV 96 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCC--------EEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCC--------eEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEE
Confidence 456789999999999999999999 69999975 111
Q ss_pred ---cCCceEEEecCCCCCCEEEEEEEEeCCCCcEEEEEEEEe
Q psy6361 48 ---TRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVL 86 (148)
Q Consensus 48 ---~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 86 (148)
.....|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 97 ~~~~~~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 97 ETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EEETTEEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EeCCCEEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 011359999999999999999999999987777777663
No 249
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.47 E-value=3.8e-13 Score=78.63 Aligned_cols=74 Identities=12% Similarity=0.110 Sum_probs=61.4
Q ss_pred eeeeEeeeccceeeeeeccc---CCCCcCCCCccEEEEeeCC------------EE---ec-----CCceEEEecCCCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYT---NLPQSRNPGQVIKRYLKDL------------LY---VT-----RNGSFVINNIAEKD 62 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~---~~p~~~~~~~~~v~W~~~~------------~~---~~-----~~~~l~i~~~~~~d 62 (148)
....+..|+.+.|.|.+.+. +.| .|.|||+. .. .. ....|+|.++...|
T Consensus 15 ~~v~V~eG~~v~L~C~v~g~~~~p~P--------~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 86 (126)
T 2dav_A 15 QGGTVKVGEDITFIAKVKAEDLLRKP--------TIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNF 86 (126)
T ss_dssp CCCEEETTCCEEEEEEEECCCSSSCC--------EEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTS
T ss_pred CCeEEeCCCCEEEEEEEeccCCCCCC--------cEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCccc
Confidence 46778999999999999876 566 79999972 11 11 13679999999999
Q ss_pred CEEEEEEEEeCCCCcEEEEEEEEec
Q psy6361 63 TNVYTCTVSNAAGSTSKTIQMNVLV 87 (148)
Q Consensus 63 ~g~y~C~~~~~~~~~~~~~~l~v~~ 87 (148)
+|.|+|++.|..+..+..+.|+|..
T Consensus 87 aG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 87 AGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp CEEEEEEEECSSCEEEECCEEEEEC
T ss_pred CEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 9999999999998888889999987
No 250
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.47 E-value=4.7e-13 Score=74.99 Aligned_cols=73 Identities=18% Similarity=0.183 Sum_probs=59.2
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec----------CC--ceEEEecCCCCCCEEEEEEEEeC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT----------RN--GSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~----------~~--~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
....+..|+.+.|.|.+.+.|.| .+.|++++.... .. ..|.|.++..+|+|.|+|.+.|.
T Consensus 13 ~~~~v~~G~~v~l~C~~~g~p~p--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~ 84 (99)
T 1u2h_A 13 MDQSVREGQDVIMSIRVQGEPKP--------VVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNE 84 (99)
T ss_dssp CCEEEETTCCEEEEEEEEEESCC--------EEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CceEecCCCEEEEEEEEEEcCCC--------EEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEEC
Confidence 34578899999999999998888 699999972211 11 26999999999999999999999
Q ss_pred CCCcEEEEEEEEe
Q psy6361 74 AGSTSKTIQMNVL 86 (148)
Q Consensus 74 ~~~~~~~~~l~v~ 86 (148)
.+.....+.|.|.
T Consensus 85 ~g~~~~~~~l~V~ 97 (99)
T 1u2h_A 85 YGARQCEARLEVR 97 (99)
T ss_dssp TEEEEEEEEEEEE
T ss_pred CCceeEEEEEEEE
Confidence 9887777777764
No 251
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.47 E-value=4.1e-13 Score=81.35 Aligned_cols=80 Identities=19% Similarity=0.138 Sum_probs=62.9
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec------------CCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT------------RNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~------------~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
...+..|+.+.|.|.+.+.|.| .+.|+|++.... ....|.|.++...|+|.|+|.+.|..
T Consensus 50 ~~~v~~G~~v~L~C~~~g~P~p--------~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~ 121 (154)
T 1fhg_A 50 DMEVVEGSAARFDCKVEGYPDP--------EVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSL 121 (154)
T ss_dssp CEEEETTSCEEEEEEEEEESCC--------EEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred cEEEeCCCeEEEEEEEEEecCC--------EEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEECC
Confidence 4678899999999999998888 699999972111 12489999999999999999999999
Q ss_pred CCcEEEEEEEEecCCEEEeC
Q psy6361 75 GSTSKTIQMNVLVPPFFKDE 94 (148)
Q Consensus 75 ~~~~~~~~l~v~~~p~~~~~ 94 (148)
+.....+.|.|..+|.....
T Consensus 122 G~~~~~~~l~V~~~p~~~~~ 141 (154)
T 1fhg_A 122 GEATCTAELLVETMGKEGEG 141 (154)
T ss_dssp EEEEEEEEEEEECC------
T ss_pred CeEEEEEEEEEeCcCcCCCC
Confidence 98888888998887766544
No 252
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=2.5e-13 Score=76.33 Aligned_cols=74 Identities=18% Similarity=0.231 Sum_probs=59.1
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-------EEecCCceEEEecCCCCCCEEEEEEEEeCCCCc
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-------LYVTRNGSFVINNIAEKDTNVYTCTVSNAAGST 77 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 77 (148)
.....+..|+.+.|.|.+.+.+ | .+.|+|++ +.......|.|.++..+|+|.|+|.+.|..+..
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p-p--------~i~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~ 80 (99)
T 2cr3_A 10 VESFLVHPGDLLQLRCRLRDDV-Q--------SINWLRDGVQLAESNRTRITGEEVEVQDSVPADSGLYACVTSSPSGSD 80 (99)
T ss_dssp EEECCBCTTSCEEEECCCCSSC-C--------EEEEEESSSBCCCCSSEEECSSEEEETTCCTTTCEEEEEEEEETTEEE
T ss_pred CcCeEEeCCCcEEEEEEecCCC-C--------eEEEEECCEECCCCCcEEEECCEEEEccCCHHHCEEEEEEEEeCCceE
Confidence 3456788999999999998865 5 69999987 222235689999999999999999999998876
Q ss_pred EEEEEEEEec
Q psy6361 78 SKTIQMNVLV 87 (148)
Q Consensus 78 ~~~~~l~v~~ 87 (148)
...+.|.|..
T Consensus 81 ~~~~~l~V~~ 90 (99)
T 2cr3_A 81 TTYFSVNVSD 90 (99)
T ss_dssp EEEEEECBCS
T ss_pred EEEEEEEEec
Confidence 6666666654
No 253
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.47 E-value=6.3e-14 Score=90.21 Aligned_cols=119 Identities=10% Similarity=0.109 Sum_probs=79.1
Q ss_pred ceeeeEeeeccceeeeeeccc--CCCCcCCCCccEEEEeeCC-----E--------------------E-ec-----CCc
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYT--NLPQSRNPGQVIKRYLKDL-----L--------------------Y-VT-----RNG 51 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~--~~p~~~~~~~~~v~W~~~~-----~--------------------~-~~-----~~~ 51 (148)
.....+..|+.+.|.|.+.+. +.+ .+.|||.. . . .. ...
T Consensus 8 p~~v~~~~G~~v~L~C~~~~~~~~~~--------~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 79 (230)
T 1ypz_F 8 EISISRPRDETAQISCKVFIESFRSV--------TIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTS 79 (230)
T ss_dssp CSEEEEETTSCEEEEEEECCGGGGGC--------CEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEE
T ss_pred CCEEEEeCCCcEEEEEEeeccccCcc--------EEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEE
Confidence 345678999999999999875 333 59998842 0 0 00 113
Q ss_pred eEEEecCCCCCCEEEEEEEEeC--CC--CcEEEEEEEEec---------CCEEEeCCCceEEEecCCcEEEEeeeecc-c
Q psy6361 52 SFVINNIAEKDTNVYTCTVSNA--AG--STSKTIQMNVLV---------PPFFKDEQQESVAIVVNHPMNISCSHYGV-P 117 (148)
Q Consensus 52 ~l~i~~~~~~d~g~y~C~~~~~--~~--~~~~~~~l~v~~---------~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p 117 (148)
.|.|.+++.+|+|.|.|.+.+. .. .....+.|.|.. +|......+....+.+|+.+.|.|.+.|. |
T Consensus 80 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P 159 (230)
T 1ypz_F 80 ILTIYSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFP 159 (230)
T ss_dssp EEEECSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESS
T ss_pred EEEECcCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecC
Confidence 7999999999999999999874 11 112334677751 23322220222223458889999999876 7
Q ss_pred C-CeEEEEE-CCEEee
Q psy6361 118 T-PDFSWYK-DGSLLR 131 (148)
Q Consensus 118 ~-~~~~W~~-~g~~l~ 131 (148)
. +.+.|++ ||..+.
T Consensus 160 ~~~~v~W~~~~g~~l~ 175 (230)
T 1ypz_F 160 DVIRVYWKEKDGNTIL 175 (230)
T ss_dssp CCCEEEEECTTSSCBC
T ss_pred CCeEEEEEccCCeEcc
Confidence 5 5999999 887664
No 254
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=3.6e-13 Score=76.99 Aligned_cols=76 Identities=17% Similarity=0.069 Sum_probs=61.5
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe-----------cCC--ceEEEecCCCCCCEEEEEEEEe
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV-----------TRN--GSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~-----------~~~--~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
....+..|+.+.|.|.+.+.+.| .+.|+|++... ... ..|.|.++..+|+|.|+|.+.|
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p--------~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 87 (110)
T 2dm2_A 16 KHYKIFEGMPVTFTCRVAGNPKP--------KIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAAN 87 (110)
T ss_dssp CCEEEETTCCEEEEEEBCCSSCC--------EEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEEC
T ss_pred cCeEEeCCCeEEEEEEEEecCCC--------EEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEEE
Confidence 45678999999999999988887 69999987111 111 2699999999999999999999
Q ss_pred CCCCcEEEEEEEEecCC
Q psy6361 73 AAGSTSKTIQMNVLVPP 89 (148)
Q Consensus 73 ~~~~~~~~~~l~v~~~p 89 (148)
..+.....+.|.|...|
T Consensus 88 ~~g~~~~~~~l~V~~~~ 104 (110)
T 2dm2_A 88 PQGRISCTGRLMVQAVN 104 (110)
T ss_dssp TTCCEEECCCEEEECCS
T ss_pred CCCeEEEEEEEEEECCC
Confidence 99987777788877544
No 255
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.46 E-value=2.6e-13 Score=79.26 Aligned_cols=74 Identities=20% Similarity=0.231 Sum_probs=60.2
Q ss_pred EeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe-----------c-------CCceEEEecCCCCCCEEEEEEEE
Q psy6361 10 AMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV-----------T-------RNGSFVINNIAEKDTNVYTCTVS 71 (148)
Q Consensus 10 ~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~-----------~-------~~~~l~i~~~~~~d~g~y~C~~~ 71 (148)
...+..+.|.|.+.|.|.| .++|+|+|... . ....|.|.++...|+|.|+|.|.
T Consensus 12 ~~~~~~~~l~c~v~G~P~P--------~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~ 83 (126)
T 1he7_A 12 AVEMHHWCIPFSVDGQPAP--------SLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAA 83 (126)
T ss_dssp CCCCCEEEEEEEECCSSCC--------EEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEE
T ss_pred CccCccEEEEEEEeeeCCC--------eEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEE
Confidence 3456778899999999999 69999998111 1 12579999999999999999999
Q ss_pred eCCCCcEEEEEEEEecCCEE
Q psy6361 72 NAAGSTSKTIQMNVLVPPFF 91 (148)
Q Consensus 72 ~~~~~~~~~~~l~v~~~p~~ 91 (148)
|..|.....+.|.|...|.-
T Consensus 84 N~~G~~~~t~~l~v~~~P~~ 103 (126)
T 1he7_A 84 NPFGQASASIMAAFMDNPFE 103 (126)
T ss_dssp ETTEEEEEEEEECCCSCTTS
T ss_pred ECCCeEEEEEEEEEEcCCCC
Confidence 99999888888888766643
No 256
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.46 E-value=5.3e-13 Score=74.74 Aligned_cols=73 Identities=22% Similarity=0.248 Sum_probs=59.5
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec-----------CCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT-----------RNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~-----------~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
....+..|+.+.|.|.+.+.+.| .+.|++++.... ....|.|.++..+|+|.|+|.+.|..
T Consensus 14 ~~~~v~~G~~~~l~C~~~g~p~p--------~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 85 (99)
T 3puc_A 14 QDTTVSSDSVAKFAVKATGEPRP--------TAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNSA 85 (99)
T ss_dssp CCEEEESSSCEEEEEEEEEESCC--------EEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred ccEEEeCCCcEEEEEEEEecCCC--------EEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeCC
Confidence 35678899999999999998888 699999872221 12269999999999999999999998
Q ss_pred CCcEEEEEEEEe
Q psy6361 75 GSTSKTIQMNVL 86 (148)
Q Consensus 75 ~~~~~~~~l~v~ 86 (148)
+.....+.|.|.
T Consensus 86 g~~~~~~~l~V~ 97 (99)
T 3puc_A 86 GSVSSSCKLTIK 97 (99)
T ss_dssp EEEEEEEEEEEE
T ss_pred CcEeEEEEEEEE
Confidence 887777777664
No 257
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.46 E-value=7.1e-13 Score=77.49 Aligned_cols=82 Identities=12% Similarity=0.105 Sum_probs=63.7
Q ss_pred CCcceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE--------------------EecCCceEEEecCCCC
Q psy6361 2 SGTMNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL--------------------YVTRNGSFVINNIAEK 61 (148)
Q Consensus 2 ~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~--------------------~~~~~~~l~i~~~~~~ 61 (148)
........+..|+.+.|.|.+.+.+.| .+.|++++. .......|.|.+++.+
T Consensus 5 ~~~~~~~~v~~G~~v~L~C~~~~~p~~--------~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~ 76 (124)
T 3rbg_A 5 TNHTETITVEEGQTLTLKCVTSLRKNS--------SLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQ 76 (124)
T ss_dssp CCSEEEEEEETTSCEEEEEECCCCTTC--------EEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGG
T ss_pred cCCCccEEEcCCCCEEEEeEEeccCCC--------EEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChH
Confidence 345667889999999999999988777 699997541 1112368999999999
Q ss_pred CCEEEEEEEEeCCCCcEEEEEEEEecCCEEE
Q psy6361 62 DTNVYTCTVSNAAGSTSKTIQMNVLVPPFFK 92 (148)
Q Consensus 62 d~g~y~C~~~~~~~~~~~~~~l~v~~~p~~~ 92 (148)
|+|.|+|.+.|. +.....+.|.|..+|...
T Consensus 77 DsG~Y~C~a~n~-g~~~~~~~l~V~~~P~~~ 106 (124)
T 3rbg_A 77 DEGVYKCLHYSD-SVSTKEVKVIVLATMKGE 106 (124)
T ss_dssp GCEEEEEEEESS-SEEEEEEEEEEECC----
T ss_pred HCEEEEEEEEcC-CCCcEEEEEEEEeCCCCC
Confidence 999999999998 777888889998877644
No 258
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=1.6e-13 Score=78.41 Aligned_cols=77 Identities=21% Similarity=0.241 Sum_probs=62.8
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE----------EecC--CceEEEecCCCCCCEEEEEEEEeC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL----------YVTR--NGSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~----------~~~~--~~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
....+..|+.+.|.|.+.+.+.| .+.|++++. .... ...|.|.++..+|+|.|+|.+.|.
T Consensus 17 ~~~~v~~G~~v~l~C~~~g~p~p--------~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 88 (110)
T 2dm3_A 17 GDLTVQEGKLCRMDCKVSGLPTP--------DLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNR 88 (110)
T ss_dssp CEEEEESSSCBCCEEEEECSSCC--------EEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEECS
T ss_pred CcEEEeCCCEEEEEEEEEEcCCC--------EEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEECC
Confidence 45678899999999999998887 699999871 1111 247999999999999999999999
Q ss_pred CCCcEEEEEEEEecCCE
Q psy6361 74 AGSTSKTIQMNVLVPPF 90 (148)
Q Consensus 74 ~~~~~~~~~l~v~~~p~ 90 (148)
.+.....+.|.|..+|.
T Consensus 89 ~g~~~~~~~l~V~~~p~ 105 (110)
T 2dm3_A 89 AGQNSFSLELVVAAKES 105 (110)
T ss_dssp SCEEEECCEEEEECCCC
T ss_pred CCEEEEEEEEEEeCCCC
Confidence 98877778888876543
No 259
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.46 E-value=1.2e-12 Score=84.09 Aligned_cols=117 Identities=10% Similarity=0.089 Sum_probs=73.4
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E----Ee-c------------------------CCce
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L----YV-T------------------------RNGS 52 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~----~~-~------------------------~~~~ 52 (148)
...+..|+.+.|.|.+.+.+... ..+.+.||+.. . .. . ....
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~----~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 84 (232)
T 3qhz_H 9 PALVKPTQTLTLTCSFSGFSLST----SGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVV 84 (232)
T ss_dssp CSEECTTSCEEEEEEEESCGGGC----TTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEE
T ss_pred CEEECCCCcEEEEEEEeCccccc----ceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEE
Confidence 35688999999999997643210 11245998842 1 10 0 1125
Q ss_pred EEEecCCCCCCEEEEEEEEeCC--------CCcEEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEeeeecccC--
Q psy6361 53 FVINNIAEKDTNVYTCTVSNAA--------GSTSKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCSHYGVPT-- 118 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~~--------~~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~-- 118 (148)
|.|.+++.+|+|.|.|.+.+.. ........|.|. .+|.+... .+...+..|+.+.|.|.+.+.++
T Consensus 85 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~-~~~~~~~~g~~v~L~C~~~~~~P~~ 163 (232)
T 3qhz_H 85 LTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPL-APSSKSTSGGTAALGCLVKDYFPEP 163 (232)
T ss_dssp EEECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEE-CC-------CEEEEEEEEEEEBSSC
T ss_pred EEECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEe-cccccccCCCcEEEEEEEeeEeCCC
Confidence 9999999999999999998652 112233456665 45666544 34445667999999999987543
Q ss_pred CeEEEEECCE
Q psy6361 119 PDFSWYKDGS 128 (148)
Q Consensus 119 ~~~~W~~~g~ 128 (148)
..+.|+++|.
T Consensus 164 ~~v~W~~~g~ 173 (232)
T 3qhz_H 164 VTVSWNSGAL 173 (232)
T ss_dssp CEEEEGGGTB
T ss_pred eEEEEEECCE
Confidence 3578999886
No 260
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.46 E-value=4.4e-13 Score=75.13 Aligned_cols=74 Identities=14% Similarity=0.166 Sum_probs=60.3
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec-------------CCceEEEecCCCCCCEEEEEEEE
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT-------------RNGSFVINNIAEKDTNVYTCTVS 71 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~-------------~~~~l~i~~~~~~d~g~y~C~~~ 71 (148)
.....+..|+.+.|.|.+.+.|.| .+.|++++.... ....|.|.++..+|+|.|+|.+.
T Consensus 12 ~~~~~~~~G~~~~l~C~~~g~p~p--------~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 83 (100)
T 3irg_A 12 PSDISIDEGKVLTVACAFTGEPTP--------EVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp CSEEEEETTSEEEEEEEEEEESCC--------EEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCcEEEcCCCcEEEEEEEEEcCCC--------ceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEE
Confidence 345678899999999999998888 699999873221 12579999999999999999999
Q ss_pred eCCCCcEEEEEEEEe
Q psy6361 72 NAAGSTSKTIQMNVL 86 (148)
Q Consensus 72 ~~~~~~~~~~~l~v~ 86 (148)
|..+.....+.|.|.
T Consensus 84 n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 84 NEFGSDSATVNIHIR 98 (100)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred eCCCcEEEEEEEEEE
Confidence 999887777777664
No 261
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.45 E-value=3.7e-13 Score=75.42 Aligned_cols=73 Identities=16% Similarity=0.125 Sum_probs=59.0
Q ss_pred eeeeEeeeccceeeeeec-ccCCCCcCCCCccEEEEeeCC------EEecCCceEEEecCCCCCCEEEEEEEEeCCCCcE
Q psy6361 6 NVEQAMLLDLIPMHSRYN-YTNLPQSRNPGQVIKRYLKDL------LYVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTS 78 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~-~~~~p~~~~~~~~~v~W~~~~------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 78 (148)
....+..|+.+.|.|.+. +.+.| .+.|+|++ ........|.|.++..+|+|.|+|.+.|..+...
T Consensus 18 ~~~~v~~G~~v~l~C~~~~~~p~~--------~v~W~k~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 89 (98)
T 1gl4_B 18 RSQSVRPGADVTFICTAKSKSPAY--------TLVWTRLHNGKLPSRAMDFNGILTIRNVQPSDAGTYVCTGSNMFAMDQ 89 (98)
T ss_dssp CEEEECTTCCEEEEEEEEESSSCC--------EEEEEEGGGBCCCTTEEEETTEEEECSCCGGGCEEEEEEEECSSCEEE
T ss_pred CCeEEecCCCEEEEEeCCCCCCCc--------EEEEEeCCCCCCCceeecCCCEEEEeCCChhhCEEEEEEecCCCCccc
Confidence 345788999999999998 56666 69999974 2233456899999999999999999999988877
Q ss_pred EEEEEEEe
Q psy6361 79 KTIQMNVL 86 (148)
Q Consensus 79 ~~~~l~v~ 86 (148)
..+.|.|.
T Consensus 90 ~~~~l~V~ 97 (98)
T 1gl4_B 90 GTATLHVQ 97 (98)
T ss_dssp EEEEEEEC
T ss_pred cEEEEEEe
Confidence 77777653
No 262
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.45 E-value=1.7e-13 Score=96.07 Aligned_cols=117 Identities=15% Similarity=0.183 Sum_probs=74.4
Q ss_pred EeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe----------cCCceEEEec---CCCCC---CEEEEEEEEeC
Q psy6361 10 AMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV----------TRNGSFVINN---IAEKD---TNVYTCTVSNA 73 (148)
Q Consensus 10 ~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~----------~~~~~l~i~~---~~~~d---~g~y~C~~~~~ 73 (148)
+..|+.+.|.|.+.+.+++. ..+.++|+|++... ..+..+.+.+ +...| +|.|+|.+.|.
T Consensus 261 ~~~G~~v~L~C~~~g~~p~p----~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~ 336 (457)
T 1hzh_H 261 LMISRTPEVTCVVVDVSHED----PEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNK 336 (457)
T ss_dssp HCTTSCCCEEEEEECCCTTC----CCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECT
T ss_pred cccCCceEEEEEEEcccCCC----CceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCC
Confidence 34599999999999875420 01169999998222 2233444442 33555 99999999987
Q ss_pred CCCcEEEEEEE----EecCCEEEeCCCceEEEecCCcEEEEeeeecccCC--eEEEEECCEEee
Q psy6361 74 AGSTSKTIQMN----VLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTP--DFSWYKDGSLLR 131 (148)
Q Consensus 74 ~~~~~~~~~l~----v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~--~~~W~~~g~~l~ 131 (148)
.+.......+. +..+|.+... +.......+..+.|.|.+.|.+++ .+.|+|||..+.
T Consensus 337 ~~~~~~~~~v~~~~~~~~~P~v~~~-~~~~~~~~~~~~~l~C~~~g~~p~~~~v~W~k~g~~l~ 399 (457)
T 1hzh_H 337 ALPAPIEKTISKAKGQPREPQVYTL-PPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPEN 399 (457)
T ss_dssp TSSSCEEEEECCCCCCCBCCEEEEE-CCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred CCCCcceEEEEcccCCCCCCeEEEE-CCCccccCCCcEEEEEEEEeEECCCCEEEEEECCEECc
Confidence 65433332332 3456776654 322212234449999999886443 899999999885
No 263
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.45 E-value=8.5e-13 Score=85.37 Aligned_cols=118 Identities=11% Similarity=0.103 Sum_probs=76.8
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC---------EEe----------------------------cC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL---------LYV----------------------------TR 49 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~---------~~~----------------------------~~ 49 (148)
...+..|+.+.|.|.+.+.+.+. ....+.||+.. ... ..
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~----~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 84 (239)
T 3tv3_H 9 PTLVEASETLSLTCAVSGDSTAA----CNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKN 84 (239)
T ss_dssp CSEECTTSCEEEEEEEESSCTTS----SSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGT
T ss_pred CEEEcCCCCEEEEEEEcCCcccc----cceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCC
Confidence 45788999999999998754320 01269999842 111 11
Q ss_pred CceEEEecCCCCCCEEEEEEEEeCCC-------------CcEEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEee
Q psy6361 50 NGSFVINNIAEKDTNVYTCTVSNAAG-------------STSKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCS 112 (148)
Q Consensus 50 ~~~l~i~~~~~~d~g~y~C~~~~~~~-------------~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~ 112 (148)
...|.|.+++.+|+|.|.|.+.+..+ .......|.|. .+|.+... +....+..|+.+.|.|.
T Consensus 85 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~-~~~~~~~~g~~v~l~C~ 163 (239)
T 3tv3_H 85 LVFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPL-APSSKSTSGGTAALGCL 163 (239)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEE-CCCCCC--TTEEEEEEE
T ss_pred EEEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEE-CCChhhccCCcEEEEEE
Confidence 12499999999999999999876421 11222355654 35555544 33344557899999999
Q ss_pred eec-ccCC-eEEEEECCEE
Q psy6361 113 HYG-VPTP-DFSWYKDGSL 129 (148)
Q Consensus 113 ~~g-~p~~-~~~W~~~g~~ 129 (148)
+.+ .|.+ .+.|+++|..
T Consensus 164 ~~~~~p~~~~v~W~~~g~~ 182 (239)
T 3tv3_H 164 VKDYFPEPVTVSWNSGALT 182 (239)
T ss_dssp EEEEBSSCCEEEEGGGTBC
T ss_pred EeeEeCCCeEEEEEECCcc
Confidence 987 4544 5889998863
No 264
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.45 E-value=1.2e-12 Score=85.19 Aligned_cols=116 Identities=12% Similarity=0.112 Sum_probs=74.1
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EEe---------------------------cCCceEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LYV---------------------------TRNGSFV 54 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~~---------------------------~~~~~l~ 54 (148)
...+..|+.+.|.|.+.+...+. ..+.||+.. ... .....|.
T Consensus 8 ~v~v~~G~~v~L~C~~s~~~~~~------~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 81 (248)
T 3u2s_H 8 GGVVQPGSSLRLSCAASGFDFSR------QGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQ 81 (248)
T ss_dssp CEEECTTCCEEEEEEEESSCGGG------SCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEE
T ss_pred CEEEeCCCCEEEEEEeccccCCc------cEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEE
Confidence 46788999999999997632110 158998742 000 1123599
Q ss_pred EecCCCCCCEEEEEEEEeCC----------------------CCcEEEEEEEEe----cCCEEEeCCCceEEEecCCcEE
Q psy6361 55 INNIAEKDTNVYTCTVSNAA----------------------GSTSKTIQMNVL----VPPFFKDEQQESVAIVVNHPMN 108 (148)
Q Consensus 55 i~~~~~~d~g~y~C~~~~~~----------------------~~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~ 108 (148)
|.+++.+|+|.|.|.+.+.. ........|.|. .+|.+... ++......|+.+.
T Consensus 82 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~-~~~~~~~~g~~~~ 160 (248)
T 3u2s_H 82 MNSLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPL-APSSKSTSGGTAA 160 (248)
T ss_dssp ECSCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEE-CCC------CEEE
T ss_pred ECCCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEe-CCCccccCCCcEE
Confidence 99999999999999987631 112223456665 35555544 4444556789999
Q ss_pred EEeeeec-cc-CCeEEEEECCEE
Q psy6361 109 ISCSHYG-VP-TPDFSWYKDGSL 129 (148)
Q Consensus 109 l~C~~~g-~p-~~~~~W~~~g~~ 129 (148)
|.|.+.+ .| .+.+.|+++|..
T Consensus 161 L~C~~~~~~P~~~~v~W~~~g~~ 183 (248)
T 3u2s_H 161 LGCLVKDYFPEPVTVSWNSGALT 183 (248)
T ss_dssp EEEEEEEEBSSCCEEEEGGGTBC
T ss_pred EEEEEeeEECCCeEEEEeECCcc
Confidence 9999877 44 457899998863
No 265
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.44 E-value=1.6e-13 Score=95.93 Aligned_cols=114 Identities=13% Similarity=0.149 Sum_probs=79.9
Q ss_pred Eeeeccceeeeeeccc-CCCCcCCCCccEEEEeeCCEE----e------c----CCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 10 AMLLDLIPMHSRYNYT-NLPQSRNPGQVIKRYLKDLLY----V------T----RNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 10 ~~~g~~~~l~C~~~~~-~~p~~~~~~~~~v~W~~~~~~----~------~----~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
+..|+.+.|.|.+.+. |.|. .+.|++++.. . . ....|.|.++..+| |.|+|.+.|..
T Consensus 135 ~~~g~~v~L~C~~~g~~P~p~-------~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~ 206 (444)
T 1igt_B 135 DTTGSSVTLGCLVKGYFPEPV-------TLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPA 206 (444)
T ss_dssp CCCSSCEEEEEEEEEEBSSCC-------EEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETT
T ss_pred CCCCCcEEEEEEEcceeCCCc-------EEEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCC
Confidence 3578999999999885 5553 6999998621 0 0 11357888888889 99999999998
Q ss_pred CCcEEEEEEEE------------------ecCCEEEeCCCceEE--EecCCcEEEEeeeeccc----CCeEEEEECCEEe
Q psy6361 75 GSTSKTIQMNV------------------LVPPFFKDEQQESVA--IVVNHPMNISCSHYGVP----TPDFSWYKDGSLL 130 (148)
Q Consensus 75 ~~~~~~~~l~v------------------~~~p~~~~~~~~~~~--~~~g~~~~l~C~~~g~p----~~~~~W~~~g~~l 130 (148)
+.......+.+ ..+|.+... ++... +.+|+.+.|.|.+.|.+ .+.+.|+++|..+
T Consensus 207 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~-~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~ 285 (444)
T 1igt_B 207 SSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIF-PPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEV 285 (444)
T ss_dssp TTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEE-CCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEEC
T ss_pred CCcceEEEeccCCCCcccCCccccCCcccCCCceEEec-CCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccc
Confidence 87444333322 124554222 22222 47899999999998873 3599999999887
Q ss_pred ec
Q psy6361 131 RI 132 (148)
Q Consensus 131 ~~ 132 (148)
..
T Consensus 286 ~~ 287 (444)
T 1igt_B 286 HT 287 (444)
T ss_dssp SS
T ss_pred cC
Confidence 54
No 266
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.44 E-value=1.7e-12 Score=91.55 Aligned_cols=116 Identities=14% Similarity=0.219 Sum_probs=81.0
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EEe---------------------------cCCceE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LYV---------------------------TRNGSF 53 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~~---------------------------~~~~~l 53 (148)
....+..|+.+.|.|.+.+.+.+. ..+.|||+. ... .....|
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~------~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 82 (475)
T 1iga_A 9 GAEVKKPGASVKVSCKASGYSFTS------YGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYM 82 (475)
T ss_pred CcEEEeCCCCEEEEEEecCCCCCC------ceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEE
Confidence 456889999999999998764111 169999852 000 012479
Q ss_pred EEecCCCCCCEEEEEEEEeCCCC------cEEEEEEEEec----CCEEEeCCCceEEEecCCcEEEEeeeecc-cC-C-e
Q psy6361 54 VINNIAEKDTNVYTCTVSNAAGS------TSKTIQMNVLV----PPFFKDEQQESVAIVVNHPMNISCSHYGV-PT-P-D 120 (148)
Q Consensus 54 ~i~~~~~~d~g~y~C~~~~~~~~------~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-~-~ 120 (148)
.|.+++.+|+|.|.|.+.+..+. ....+.|.|.. +|.+... +. ....+|+.+.|.|.+.|. |. | .
T Consensus 83 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~-~~-~~~~~g~~v~L~C~~~g~~P~~p~~ 160 (475)
T 1iga_A 83 GLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPL-SL-CSTQPDGNVVIACLVQGFFPQEPLS 160 (475)
T ss_pred EECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEec-Cc-cccCCCCeEEEEEEEeeecCCCceE
Confidence 99999999999999999987641 22345666652 4554433 22 223689999999999887 65 5 9
Q ss_pred EEEEECCEE
Q psy6361 121 FSWYKDGSL 129 (148)
Q Consensus 121 ~~W~~~g~~ 129 (148)
+.|++++..
T Consensus 161 v~W~~~~~~ 169 (475)
T 1iga_A 161 VTWSESGQG 169 (475)
T ss_pred EEEcCCCcc
Confidence 999998854
No 267
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.44 E-value=7.1e-13 Score=73.82 Aligned_cols=75 Identities=13% Similarity=0.169 Sum_probs=60.0
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe-------cCCceEEEecCCCCCCEEEEEEEEeCCCCc
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV-------TRNGSFVINNIAEKDTNVYTCTVSNAAGST 77 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~-------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 77 (148)
.....+..|+.+.|.|.+.+ .| .+.|+|++... .....|.|.++..+|+|.|+|.+.|..+..
T Consensus 8 p~~~~v~~G~~~~l~C~~~~--~p--------~v~W~k~g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~ 77 (95)
T 4hwu_A 8 PEAYVVAPGESLELQCMLKD--AA--------VISWTKDGVHLGPNNRTVLIGEYLQIKGATPRDSGLYACTAARTVDSE 77 (95)
T ss_dssp CEEEEECTTSCEEEECCCCT--TC--------EEEEEETTEEECCCSSEEEETTEEEECSCCGGGCEEEEEEEECSSCEE
T ss_pred CCcEEECCCCEEEEEEEeCC--CC--------EEEEEECCEECCCCceEEEeCCEEEECcCCcccCEEEEEEEccCCCcE
Confidence 44677889999999999886 34 69999987222 224689999999999999999999998877
Q ss_pred EEEEEEEEecCC
Q psy6361 78 SKTIQMNVLVPP 89 (148)
Q Consensus 78 ~~~~~l~v~~~p 89 (148)
...+.|.|..++
T Consensus 78 ~~~~~l~V~~~~ 89 (95)
T 4hwu_A 78 TWIFMVNVTDAA 89 (95)
T ss_dssp EEEEEEEECCC-
T ss_pred EEEEEEEEeCCc
Confidence 777777776544
No 268
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.42 E-value=1.6e-13 Score=78.09 Aligned_cols=73 Identities=12% Similarity=0.200 Sum_probs=59.8
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE-----------EecCCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL-----------YVTRNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~-----------~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
....+..|+.+.|.|.+.+.|.| .+.|++++. .......|.|.++..+|+|.|+|.+.|..
T Consensus 22 ~~~~v~~G~~v~L~C~~~g~p~p--------~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~ 93 (106)
T 1nct_A 22 RSMTVYEGESARFSCDTDGEPVP--------TVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSE 93 (106)
T ss_dssp CCEEESSSSCEECCEEEECSSCC--------BCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCSS
T ss_pred CCEEEeCCCcEEEEEEEEEcCCC--------EEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeCC
Confidence 45678899999999999998888 599999871 11124689999999999999999999999
Q ss_pred CCcEEEEEEEEe
Q psy6361 75 GSTSKTIQMNVL 86 (148)
Q Consensus 75 ~~~~~~~~l~v~ 86 (148)
+.....+.|.|.
T Consensus 94 G~~~~~~~l~V~ 105 (106)
T 1nct_A 94 GKQEAEFTLTIQ 105 (106)
T ss_dssp CBCCEEEEEEEC
T ss_pred CeEEEEEEEEEE
Confidence 887777777663
No 269
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.42 E-value=1.1e-13 Score=93.84 Aligned_cols=113 Identities=12% Similarity=0.156 Sum_probs=75.4
Q ss_pred Eeeeccceeeeeeccc-CCCCcCCCCccEEEEeeCCEE---------ecCC------ceEEEecCCCCCCEEEEEEEEeC
Q psy6361 10 AMLLDLIPMHSRYNYT-NLPQSRNPGQVIKRYLKDLLY---------VTRN------GSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 10 ~~~g~~~~l~C~~~~~-~~p~~~~~~~~~v~W~~~~~~---------~~~~------~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
+..|+.+.|.|.+.+. |.+. .+.|++++.. ...+ ..|.|.++..+| |.|+|.+.|.
T Consensus 132 ~~~g~~v~L~C~~~g~~P~~~-------~v~W~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~ 203 (344)
T 1za6_B 132 STSGGTAALGCLVKDYFPEPV-------TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHK 203 (344)
T ss_dssp TTSSSEEEEEEEEEEEBSSCC-------CEEETTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEG
T ss_pred ccCCCcEEEEEEEeeEECCCe-------EEEEecCCccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeC
Confidence 3578899999999987 4322 6999998721 1111 257888887777 9999999998
Q ss_pred CCCcEEEEEEE------------------------EecCCEEEeCCCceEEEecCCcEEEEeeeecc-c-CCeEEEEECC
Q psy6361 74 AGSTSKTIQMN------------------------VLVPPFFKDEQQESVAIVVNHPMNISCSHYGV-P-TPDFSWYKDG 127 (148)
Q Consensus 74 ~~~~~~~~~l~------------------------v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p-~~~~~W~~~g 127 (148)
.+.......+. +..+|.+... +......+|..+.|.|.+.|. | .+.+.|+|||
T Consensus 204 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v~~~-~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g 282 (344)
T 1za6_B 204 PSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQVYTL-PPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNG 282 (344)
T ss_dssp GGTEEEEEEECCCCC--------------------CCBCCEEEEE-CCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSS
T ss_pred CCCccceEeecccccccccccCCCCCCccccccCCCCcCCEEEEe-CCChHhccCCcEEEEEEEeeEECCCeEEEEEECC
Confidence 77533222221 1245555443 222222356679999999885 4 3589999999
Q ss_pred EEee
Q psy6361 128 SLLR 131 (148)
Q Consensus 128 ~~l~ 131 (148)
..+.
T Consensus 283 ~~~~ 286 (344)
T 1za6_B 283 QPEN 286 (344)
T ss_dssp SCCC
T ss_pred eECC
Confidence 8875
No 270
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.41 E-value=4.4e-13 Score=74.13 Aligned_cols=71 Identities=17% Similarity=0.268 Sum_probs=57.4
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec--CCceEEEecCCCCCCEEEEEEEEeCCCCc-EEEEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT--RNGSFVINNIAEKDTNVYTCTVSNAAGST-SKTIQM 83 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~--~~~~l~i~~~~~~d~g~y~C~~~~~~~~~-~~~~~l 83 (148)
...+..|+.+.|.|.+.+.|.| .+.|+|++.... ....|.|.++..+|+|.|+|.+.|..+.. +..+.|
T Consensus 12 ~~~v~~G~~~~l~C~~~g~p~p--------~i~W~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l 83 (91)
T 3bfo_A 12 SQKLMPGSTLVLQCVAVGSPIP--------HYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEI 83 (91)
T ss_dssp CEEECTTSCEEEECEEECSSCC--------EEEEEETTEECTTCCSSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEE
T ss_pred ccEecCCCcEEEEEEeccCCCC--------EEEEEcCCeeCCcCCCCeEEECCCCHHhCEEEEEEEEcCCCCEEeeeEEE
Confidence 4668899999999999998888 699999984433 34689999999999999999999988752 234555
Q ss_pred EE
Q psy6361 84 NV 85 (148)
Q Consensus 84 ~v 85 (148)
.|
T Consensus 84 ~V 85 (91)
T 3bfo_A 84 II 85 (91)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 271
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.41 E-value=9.6e-14 Score=92.28 Aligned_cols=119 Identities=10% Similarity=0.046 Sum_probs=46.9
Q ss_pred eEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec--------CCceEEEecCCCCCCEEEEEEEEeCCCC----
Q psy6361 9 QAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT--------RNGSFVINNIAEKDTNVYTCTVSNAAGS---- 76 (148)
Q Consensus 9 ~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~--------~~~~l~i~~~~~~d~g~y~C~~~~~~~~---- 76 (148)
.+..|+.++|.|.+.+..++. .++++|+|++.... ....+.+...+..+.+.|+|+|.+..+.
T Consensus 97 ~~~~G~~~~LtC~v~g~~P~~-----~l~itW~kg~~~l~~~~~~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~ 171 (291)
T 1mq8_A 97 WQPVGKNLTLRCQVEGGAPRA-----NLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLE 171 (291)
T ss_dssp BCCSSCCCEEEEEECCCBSTT-----TEEEEEESSSSEEEEEECCBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSC
T ss_pred cccCCCCEEEEEEecCccCCC-----CcEEEEEECCEEeecccCCCCCceEEEEeeeeeccCCceEEEEEEecCCccCCc
Confidence 367899999999999875542 23689999982111 1124555544555556999999986442
Q ss_pred ----cEEEEEEEEecCCEE-EeCCCceEEEecCCcEEEEeeeecccCC---eEEEEECCEEeecC
Q psy6361 77 ----TSKTIQMNVLVPPFF-KDEQQESVAIVVNHPMNISCSHYGVPTP---DFSWYKDGSLLRIQ 133 (148)
Q Consensus 77 ----~~~~~~l~v~~~p~~-~~~~~~~~~~~~g~~~~l~C~~~g~p~~---~~~W~~~g~~l~~~ 133 (148)
.+....|.|..+|.. ... .....+.+|+.+.|.|.+.|.+++ .++|+++|+.+...
T Consensus 172 l~~~~s~~~~L~V~~~P~~~~~~-~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~~~ 235 (291)
T 1mq8_A 172 LFENTSAPYQLQTFVLPATPPQL-VSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPT 235 (291)
T ss_dssp EEEECCCCEECBC----------------------------------------------------
T ss_pred cccccccceEEEEEecCCCCcee-cCCcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecCce
Confidence 234456777766533 222 122367789999999999997544 59999999998753
No 272
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.41 E-value=1.7e-11 Score=79.74 Aligned_cols=118 Identities=10% Similarity=0.131 Sum_probs=83.6
Q ss_pred eEeeeccceeeeeecccCC---CCcCCCCccEEEEeeCCEEec-CCceEEEecCCCCCCEEEEEEEEeCCCCcEEEEEEE
Q psy6361 9 QAMLLDLIPMHSRYNYTNL---PQSRNPGQVIKRYLKDLLYVT-RNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMN 84 (148)
Q Consensus 9 ~~~~g~~~~l~C~~~~~~~---p~~~~~~~~~v~W~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~ 84 (148)
....|+.+.|+|.+.+..+ |. ++.|+|++.... ....|.+..+...|+|.|+|.+.+..+.......+.
T Consensus 13 ~i~~GdsVTLTatVaGGkP~pspy-------TYqWyKDG~~IsGaT~tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs~Vt 85 (304)
T 3shs_A 13 CFLAGDGFTLTATVAGDEPLPSNL-------TYTWTKDDQPHENNTATLTVADATSENAGSYKVTVQDTDTMTSVESEVF 85 (304)
T ss_dssp SBCTTCCEEEEEEEEESSSCCCCE-------EEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEEEETTTCCEEECCCE
T ss_pred cccCCCCEEEEEEecCCCCCCCCc-------eEEEEECCccccCCcceEEeeeccccCCeEEEEEEEECCCCeeeeeeEE
Confidence 3567999999999876644 33 799999984443 456889999999999999999999777643333333
Q ss_pred Eec--CCEEEeCCCceEEEecCCcEEEEeee--ec-cc-----CCeEEEEECCEEeecC
Q psy6361 85 VLV--PPFFKDEQQESVAIVVNHPMNISCSH--YG-VP-----TPDFSWYKDGSLLRIQ 133 (148)
Q Consensus 85 v~~--~p~~~~~~~~~~~~~~g~~~~l~C~~--~g-~p-----~~~~~W~~~g~~l~~~ 133 (148)
|.. .+.+....|....+..+..+.|.+.+ .| .+ ...++|+|||..+...
T Consensus 86 VT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgA 144 (304)
T 3shs_A 86 LMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTT 144 (304)
T ss_dssp EECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESS
T ss_pred EeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCc
Confidence 332 23333332555556667889998876 43 33 4599999999988654
No 273
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.40 E-value=2.4e-13 Score=88.12 Aligned_cols=113 Identities=18% Similarity=0.171 Sum_probs=73.8
Q ss_pred eeeccceeeeeecccC---CCCcCCCCccEEEEeeCCEEec----------CC------ceEEEecCCCCCCEEEEEEEE
Q psy6361 11 MLLDLIPMHSRYNYTN---LPQSRNPGQVIKRYLKDLLYVT----------RN------GSFVINNIAEKDTNVYTCTVS 71 (148)
Q Consensus 11 ~~g~~~~l~C~~~~~~---~p~~~~~~~~~v~W~~~~~~~~----------~~------~~l~i~~~~~~d~g~y~C~~~ 71 (148)
..|+.+.|.|.+.+.. .+. .++|+|+|.... .+ ..|.|......|.|.|+|.+.
T Consensus 37 ~~g~~~~L~C~v~g~~p~P~~i-------~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~ 109 (240)
T 4acp_A 37 MISRTPEVTCVVVDVSHEDPEV-------KFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVS 109 (240)
T ss_dssp SSSSCCEEEEEEESCCC--CCC-------EEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEE
T ss_pred ccCCCcEEEEEEeccccCCCcc-------EEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEE
Confidence 3589999999999875 233 799999983221 11 245555555567899999999
Q ss_pred eCCCC--cEEEEEE--EEecCCEEEeCCCceEEEecCCcEEEEeeeec-ccCC-eEEEEECCEEee
Q psy6361 72 NAAGS--TSKTIQM--NVLVPPFFKDEQQESVAIVVNHPMNISCSHYG-VPTP-DFSWYKDGSLLR 131 (148)
Q Consensus 72 ~~~~~--~~~~~~l--~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~-~~~W~~~g~~l~ 131 (148)
+..+. ....+.+ .+..+|.+... +......+|+.+.|.|.+.| +|.+ .+.|++||..+.
T Consensus 110 h~~~~~~~~~~i~~~~~~~~~P~V~v~-~~~~~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~ 174 (240)
T 4acp_A 110 NKALPAPIEKTISKAKGQPREPQVYTL-PPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPEN 174 (240)
T ss_dssp CC----CEEEEECCCCSCCBCCEEEEE-CCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred cCCCCccccccccccCCCCCCCEEEEE-CCChHHhcCCceEEEEEEeEEeCCCcEEEEEECCEECC
Confidence 97753 2223222 12356766655 33322235889999999988 4554 799999998864
No 274
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.40 E-value=1.5e-14 Score=92.15 Aligned_cols=117 Identities=12% Similarity=0.089 Sum_probs=77.3
Q ss_pred eEeeeccceeeeeecccCC--CCcCCCCccEEEEeeCCE-----Ee----c------CCceEEEecCCCCCCEEEEEEEE
Q psy6361 9 QAMLLDLIPMHSRYNYTNL--PQSRNPGQVIKRYLKDLL-----YV----T------RNGSFVINNIAEKDTNVYTCTVS 71 (148)
Q Consensus 9 ~~~~g~~~~l~C~~~~~~~--p~~~~~~~~~v~W~~~~~-----~~----~------~~~~l~i~~~~~~d~g~y~C~~~ 71 (148)
.+..|+.+.|.|.+.+.+. +. .+.| ++.. .. . ....|.|.++..+|+|.|+|.+.
T Consensus 15 ~v~~G~~v~L~C~~~g~~p~~~~-------~v~W-~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~Y~C~~~ 86 (214)
T 1ow0_A 15 DLLLGSEANLTCTLTGLRDASGV-------TFTW-TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAA 86 (214)
T ss_dssp HHHHCSSCCCEEEETTCCSCCCC-------CCCB-SSCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCEEEEEEC
T ss_pred HhccCCCcEEEEEEeeeECCCCe-------EEEE-cCCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCeEEEEEe
Confidence 3578999999999988754 22 5899 5430 00 0 11246666777789999999999
Q ss_pred eCCCCcEEEEEEE---EecCCEEEeCCCceEEEecCCcEEEEeeeecc-cC-CeEEEEECCEEeecC
Q psy6361 72 NAAGSTSKTIQMN---VLVPPFFKDEQQESVAIVVNHPMNISCSHYGV-PT-PDFSWYKDGSLLRIQ 133 (148)
Q Consensus 72 ~~~~~~~~~~~l~---v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-~~~~W~~~g~~l~~~ 133 (148)
+..+.......+. +..+|.+....+....+.+|..+.|.|.+.|. |. +.+.|+|||..+...
T Consensus 87 ~~~~~~~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 153 (214)
T 1ow0_A 87 YPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPRE 153 (214)
T ss_dssp CSSCSSCEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGG
T ss_pred cCCCCCceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCC
Confidence 8765433222332 23567665441222234567889999999885 53 499999999987543
No 275
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=7.7e-13 Score=76.47 Aligned_cols=74 Identities=12% Similarity=0.105 Sum_probs=60.6
Q ss_pred eeeeEeeeccceeeeeeccc---CCCCcCCCCccEEEEeeCC------------EE---ecC-----CceEEEecCCCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYT---NLPQSRNPGQVIKRYLKDL------------LY---VTR-----NGSFVINNIAEKD 62 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~---~~p~~~~~~~~~v~W~~~~------------~~---~~~-----~~~l~i~~~~~~d 62 (148)
....+..|+.+.|.|.+.+. +.| .|.|||+. .. ... ...|+|.++...|
T Consensus 20 ~~v~V~eG~~v~L~C~v~g~~~~p~P--------~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 91 (118)
T 2edn_A 20 DSVSVETGKDAVVVAKVNGKELPDKP--------TIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGD 91 (118)
T ss_dssp CCCEEETTSCEECCEEEETTTSSSCC--------CCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTT
T ss_pred CCeEEeCCCCEEEEEEEeccCCCCCC--------cEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhh
Confidence 45778999999999999886 456 59999973 11 111 3679999999999
Q ss_pred CEEEEEEEEeCCCCcEEEEEEEEec
Q psy6361 63 TNVYTCTVSNAAGSTSKTIQMNVLV 87 (148)
Q Consensus 63 ~g~y~C~~~~~~~~~~~~~~l~v~~ 87 (148)
+|.|+|.+.|..+..+..+.|.|..
T Consensus 92 ~G~Y~Cevsn~~g~~s~~~~L~V~~ 116 (118)
T 2edn_A 92 RGYYRLEVKAKDTCDSCGFNIDVEA 116 (118)
T ss_dssp CSCEEEEEECSSCEEEEEECCEEEC
T ss_pred CEEEEEEEEEcCCcEEEEEEEEEEc
Confidence 9999999999999888888888865
No 276
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.40 E-value=1.8e-12 Score=73.55 Aligned_cols=75 Identities=12% Similarity=0.119 Sum_probs=60.5
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE---------------Ee-----cCCceEEEecCCCCCCEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL---------------YV-----TRNGSFVINNIAEKDTNV 65 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~---------------~~-----~~~~~l~i~~~~~~d~g~ 65 (148)
....+..|+.+.|.|.+.+.+.+ .+.|++++. .. .....|.|.+++.+|+|.
T Consensus 14 ~~~~v~~G~~v~L~C~~~~~~~~--------~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~ 85 (108)
T 3m45_A 14 QNVTVVEGGTAILTCRVDQNDNT--------SLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQ 85 (108)
T ss_dssp CCEEEETTSCEEEEEEESSCSSC--------CEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCEE
T ss_pred CeeEEEeCCcEEEEeEEcCCCcc--------EEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCeE
Confidence 45788899999999999998877 599998641 00 034579999999999999
Q ss_pred EEEEEEeCCCCcEEEEEEEEecCC
Q psy6361 66 YTCTVSNAAGSTSKTIQMNVLVPP 89 (148)
Q Consensus 66 y~C~~~~~~~~~~~~~~l~v~~~p 89 (148)
|+|.+.| .+..+..+.|.|..+|
T Consensus 86 Y~C~~~n-~~~~~~~~~L~V~~~P 108 (108)
T 3m45_A 86 YTCSLFT-MPVKTSKAYLTVLGVP 108 (108)
T ss_dssp EEEEECS-SSCEEEEEEEEEECCC
T ss_pred EEEEEEc-CCCcEEEEEEEEEcCC
Confidence 9999999 7777777888887655
No 277
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.40 E-value=2.4e-15 Score=104.84 Aligned_cols=116 Identities=15% Similarity=0.145 Sum_probs=79.8
Q ss_pred EeeeccceeeeeecccCC-CCcCCCCccEEEEeeCCEEec----------------CCceEEEecCCCCCCEEEEEEEEe
Q psy6361 10 AMLLDLIPMHSRYNYTNL-PQSRNPGQVIKRYLKDLLYVT----------------RNGSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 10 ~~~g~~~~l~C~~~~~~~-p~~~~~~~~~v~W~~~~~~~~----------------~~~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
+..|+.+.|.|.+.+.++ |. ...++|+|++.... ....|.|.++..+|+|.|+|.+.|
T Consensus 242 v~~G~~~~L~C~~~g~~p~P~-----~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 316 (434)
T 1igy_B 242 LLITVTPKVTCVVVDISKDDP-----EVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNS 316 (434)
T ss_dssp HSTTSCCEEEEEECCCCSSCC-----CCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCC
T ss_pred cccCCCcEEEEEEeccccCCC-----CeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEEC
Confidence 677999999999998742 10 11599999872110 123688999999999999999999
Q ss_pred CCCCc--EEEEEE--EEecCCEEEeCCCceEEEecCCcEEEEeeeecc-cC-CeEEEEECCEEee
Q psy6361 73 AAGST--SKTIQM--NVLVPPFFKDEQQESVAIVVNHPMNISCSHYGV-PT-PDFSWYKDGSLLR 131 (148)
Q Consensus 73 ~~~~~--~~~~~l--~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-~~~~W~~~g~~l~ 131 (148)
..+.. ...+.+ .+..+|.+... +......+|+.+.|.|.+.|. |. +.+.|+|||..+.
T Consensus 317 ~~~~~~~~~~v~~~~~~~~~P~v~~~-~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 380 (434)
T 1igy_B 317 AAFPAPIEKTISKTKGKPRAPQVYTI-PPPKEQMAKDKVSLTCMITDFFPEDITVEWQSDGQAPE 380 (434)
T ss_dssp SSCSSCCCCCCCCCCSCCBCCCCEEE-CCCSSSSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCS
T ss_pred CCCCCceeEEEeccCCCCcCCEEEEE-CCCHHHhcCCcEEEEEEEEeeECCCeEEEEEECCEecC
Confidence 87753 222222 23356766544 332223457789999999885 43 3899999998874
No 278
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.40 E-value=1.7e-11 Score=76.23 Aligned_cols=116 Identities=12% Similarity=0.117 Sum_probs=84.5
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC--EEe-c---CCceEEEecCCCCCCEEEEEEEEeCCCCcEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL--LYV-T---RNGSFVINNIAEKDTNVYTCTVSNAAGSTSKT 80 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~--~~~-~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 80 (148)
...+..|+++.|.|.+.. +.|. .+.|.-.- ... . ....+.|.+++. | |.|.|.+..........
T Consensus 8 ~~~V~~G~Sv~l~Cs~~c-~~p~-------~~~~~t~l~~~~~~~~~~~~~~l~l~~vs~-~-g~y~C~~~c~~~~~~~~ 77 (185)
T 1iam_A 8 KVILPRGGSVLVTCSTSC-DQPK-------LLGIETPLPKKELLLPGNNRKVYELSNVQE-D-SQPMCYSNCPDGQSTAK 77 (185)
T ss_dssp EEEEETTEEEEEEEEECS-SSCS-------EEEEECSSCEEEECSSSSSEEEEEEEEECS-C-BCCEEEEECSSCEEEEE
T ss_pred CcEEeCCCCEEEEEEccC-CCCc-------cceEEeeCCCccEeccCCceeEEEEEecCc-C-CEEEEEEECCCCceEEE
Confidence 456899999999999964 4453 46664321 122 1 124689999973 4 99999987654557778
Q ss_pred EEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecc-cCC--eEEEEECCEEeec
Q psy6361 81 IQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGV-PTP--DFSWYKDGSLLRI 132 (148)
Q Consensus 81 ~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~--~~~W~~~g~~l~~ 132 (148)
+.|+|..+|......+....+.+|+.+.|.|.+.|. |.+ .+.|||+++.+..
T Consensus 78 ~~l~V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~ 132 (185)
T 1iam_A 78 TFLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKR 132 (185)
T ss_dssp CEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEE
T ss_pred EEEEEeCCCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEccc
Confidence 889998777766553555569999999999999874 543 4899999999864
No 279
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.39 E-value=1.3e-13 Score=92.72 Aligned_cols=111 Identities=10% Similarity=0.143 Sum_probs=71.7
Q ss_pred ccceeeeeecccCCCCcCCCCccEEEEeeCCEEecC----------C------ceEEEecCCCCCCEEEEEEEEeCCCCc
Q psy6361 14 DLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTR----------N------GSFVINNIAEKDTNVYTCTVSNAAGST 77 (148)
Q Consensus 14 ~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~~----------~------~~l~i~~~~~~d~g~y~C~~~~~~~~~ 77 (148)
+.+.|.|.+.+..++. ..+.|+|++..... + ..|.|.+...+|+|.|+|.+.|..+..
T Consensus 25 ~~v~L~C~~~g~~P~~------~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~ 98 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGT------IQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTF 98 (323)
T ss_dssp SEEEEEEEEEEECCCC------EEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEE
T ss_pred CcEEEEEEEeCeECCC------eEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCc
Confidence 5899999998863321 17999999722211 1 235666666679999999999977543
Q ss_pred EEEEEEEEe---cCCEEEeCCCceEEEecCCcEEEEeeeecc-cCC---eEEEEECC-EEe
Q psy6361 78 SKTIQMNVL---VPPFFKDEQQESVAIVVNHPMNISCSHYGV-PTP---DFSWYKDG-SLL 130 (148)
Q Consensus 78 ~~~~~l~v~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~---~~~W~~~g-~~l 130 (148)
...+.+.+. ..|.+....+....+.+|+.+.|.|.+.|. |.+ .+.|++++ ..+
T Consensus 99 ~~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~ 159 (323)
T 2wqr_A 99 EDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPV 159 (323)
T ss_dssp EEEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCC
T ss_pred ceeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCccc
Confidence 332221111 234332221444456789999999998875 556 89999964 544
No 280
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.37 E-value=1.8e-12 Score=73.53 Aligned_cols=75 Identities=8% Similarity=-0.020 Sum_probs=57.0
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE---------E--ecCCceEEEecCCCCCCEEEEEEEEeC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL---------Y--VTRNGSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~---------~--~~~~~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
..+..+..|+.+.|.|.+.+.+.+. .+.|+|++. . ......|.|.++..+|+|.|+|.+.+
T Consensus 15 ~~~~~v~~G~~v~l~C~v~~~~~~~-------~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~- 86 (104)
T 2eny_A 15 LKTMEVLEGESCSFECVLSHESASD-------PAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVRG- 86 (104)
T ss_dssp CCCEEEESSCCEEEEEECSSCCCSS-------CBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEETT-
T ss_pred CCCcEEcCCCcEEEEEEEcCCCCCc-------eeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEECC-
Confidence 4567899999999999998877542 488999971 1 11234799999999999999998743
Q ss_pred CCCcEEEEEEEEecCCE
Q psy6361 74 AGSTSKTIQMNVLVPPF 90 (148)
Q Consensus 74 ~~~~~~~~~l~v~~~p~ 90 (148)
......|.|..+|.
T Consensus 87 ---~~~~a~L~V~~~p~ 100 (104)
T 2eny_A 87 ---LTSKASLIVRERSG 100 (104)
T ss_dssp ---EEEEECEEEECCCS
T ss_pred ---eeEEEEEEEeCCCc
Confidence 45667788876653
No 281
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.37 E-value=5.7e-12 Score=79.87 Aligned_cols=113 Identities=14% Similarity=0.131 Sum_probs=74.3
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EE---------------e------cCCceEEEecCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LY---------------V------TRNGSFVINNIA 59 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~---------------~------~~~~~l~i~~~~ 59 (148)
....+..|+.+.|.|.+.+.. + .+.|||.. .. . .....|.|.+++
T Consensus 9 ~~v~v~~G~~v~L~C~~~~~~-~--------~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~ 79 (207)
T 1ypz_E 9 SALSLHEGTDSALRCNFTTTM-R--------SVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQ 79 (207)
T ss_dssp SEEEEETTCCEEEEEEESSCC-S--------EEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCC
T ss_pred CeEEEccCCcEEEEEEEeCCC-e--------EEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCC
Confidence 456799999999999997643 2 59999842 11 0 112479999999
Q ss_pred CCCCEEEEEEEEeCCC---------C--cEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecc-cC-CeEEEEEC
Q psy6361 60 EKDTNVYTCTVSNAAG---------S--TSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGV-PT-PDFSWYKD 126 (148)
Q Consensus 60 ~~d~g~y~C~~~~~~~---------~--~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-~~~~W~~~ 126 (148)
.+|+|.|.|.+.+..+ . ......|.|...+.... ++...+..+ .+.|.|.+.+. |. +.+.|+++
T Consensus 80 ~~D~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~--~P~v~~~~~-~~~l~C~~~g~~P~~~~v~W~~~ 156 (207)
T 1ypz_E 80 LEDSGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPA--KPSVFIMKN-GTNVACLVKDFYPKEVTISLRSS 156 (207)
T ss_dssp GGGCEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCC--CCEEEEEEE-TTEEEEEEEEESSSCCEEEEECS
T ss_pred HHHCEEEEEEEecCCcccccccccceeeecCccEEEEccCCCCCC--CCeEEEeCC-CCeEEEEEeeEeCCCeEEEEecC
Confidence 9999999999987532 1 12335677764211111 122222222 37899998875 54 69999999
Q ss_pred CEEee
Q psy6361 127 GSLLR 131 (148)
Q Consensus 127 g~~l~ 131 (148)
..+.
T Consensus 157 -~~l~ 160 (207)
T 1ypz_E 157 -KKIV 160 (207)
T ss_dssp -SEEE
T ss_pred -Cccc
Confidence 6664
No 282
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.35 E-value=4.7e-12 Score=71.52 Aligned_cols=73 Identities=8% Similarity=0.112 Sum_probs=55.7
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEecC-------------CceEEEecCCCCCCEEEEEEEE
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTR-------------NGSFVINNIAEKDTNVYTCTVS 71 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~~-------------~~~l~i~~~~~~d~g~y~C~~~ 71 (148)
.....+..|+.+.|.|.+.+ +.| .+.|+|++..... ...|.|.++..+|+|.|+|.+.
T Consensus 14 ~~~~~v~~G~~v~l~C~~~~-~~~--------~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 84 (103)
T 1x44_A 14 LEDTTAYCGERVELECEVSE-DDA--------NVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTT 84 (103)
T ss_dssp CCCEEEETTEEEEEEEECSS-SSC--------CCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEET
T ss_pred CCCEEEECCCCEEEEEEecC-CCC--------eEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEEC
Confidence 44578889999999999977 445 5999999732211 1479999999999999999987
Q ss_pred eCCCCcEEEEEEEEecCCE
Q psy6361 72 NAAGSTSKTIQMNVLVPPF 90 (148)
Q Consensus 72 ~~~~~~~~~~~l~v~~~p~ 90 (148)
| ......|.|..+|.
T Consensus 85 n----~~~~~~l~V~~~p~ 99 (103)
T 1x44_A 85 G----GQSSAKLSVDLKSG 99 (103)
T ss_dssp T----EEEEEEEEEECCCS
T ss_pred C----CcEEEEEEEeCCCC
Confidence 6 45666777775543
No 283
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.35 E-value=1.6e-11 Score=87.55 Aligned_cols=113 Identities=13% Similarity=0.083 Sum_probs=77.6
Q ss_pred EeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec-----------CC------ceEEEecCCCCCCEEEEEEEEe
Q psy6361 10 AMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT-----------RN------GSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 10 ~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~-----------~~------~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
+..|+.+.|.|.+.+..++. ..++|+|++.... .+ ..|.|.....+|.|.|+|.+.|
T Consensus 309 ~~~g~~~~L~C~v~g~~P~~------~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n 382 (512)
T 1zvo_C 309 LWLRDKATFTCFVVGSDLKD------AHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNH 382 (512)
T ss_pred hccCCceEEEEEEeceECCC------eEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEe
Confidence 34699999999999874431 2799999973211 11 2478888888899999999999
Q ss_pred CCCCcEEEEEEEE------ecCCEEEeCCCceEEEecCCcEE-EEeeeecccCC--eEEEEECCEEeecC
Q psy6361 73 AAGSTSKTIQMNV------LVPPFFKDEQQESVAIVVNHPMN-ISCSHYGVPTP--DFSWYKDGSLLRIQ 133 (148)
Q Consensus 73 ~~~~~~~~~~l~v------~~~p~~~~~~~~~~~~~~g~~~~-l~C~~~g~p~~--~~~W~~~g~~l~~~ 133 (148)
..+... ...+.. ..+|.+... +... +|+.+. |.|.+.|.+++ .+.|+|||..+...
T Consensus 383 ~~~~~~-~~~~~~~~~~~~~~~p~v~~~-~~~~---~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~ 447 (512)
T 1zvo_C 383 PSLPPQ-RLMALREPAAQAPVKLSLNLL-ASSD---PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTS 447 (512)
T ss_pred CCCCCC-ceeEEeecCCCCCCCCEEEEE-ccCc---CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCc
Confidence 876532 222221 234665544 2222 788899 99999985433 68999999988643
No 284
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.34 E-value=5.7e-12 Score=72.88 Aligned_cols=70 Identities=19% Similarity=0.199 Sum_probs=56.1
Q ss_pred ccceeeeeecccCCCCcCCCCccEEEEeeCCEEec---------------CCceEEEecCCCCCCEEEEEEEEeCCCCcE
Q psy6361 14 DLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT---------------RNGSFVINNIAEKDTNVYTCTVSNAAGSTS 78 (148)
Q Consensus 14 ~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~---------------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 78 (148)
+...|.|.+.+.|.| .+.|+|++.... ....|.|.++..+|+|.|+|.+.|..|...
T Consensus 21 ~~~~l~C~~~g~P~p--------~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~ 92 (118)
T 1wwc_A 21 LEHCIEFVVRGNPPP--------TLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTAN 92 (118)
T ss_dssp CEEEEEEEEECSSCC--------EEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEE
T ss_pred cceEEEEEeeeeCCC--------eEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEe
Confidence 445788999999888 699999972211 234799999999999999999999999888
Q ss_pred EEEEEEEecCCEE
Q psy6361 79 KTIQMNVLVPPFF 91 (148)
Q Consensus 79 ~~~~l~v~~~p~~ 91 (148)
..+.|.|...|..
T Consensus 93 ~~~~l~v~~~P~~ 105 (118)
T 1wwc_A 93 QTINGHFLKEPFP 105 (118)
T ss_dssp EEEEECCSCCCCC
T ss_pred eEEEEEEccCCCc
Confidence 8878777766643
No 285
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.34 E-value=5.8e-12 Score=69.97 Aligned_cols=69 Identities=6% Similarity=-0.006 Sum_probs=51.9
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec-----------CCceEEEecCCCCCCEEEEEEEEeC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT-----------RNGSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~-----------~~~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
..+..+..|+.+.|.|.+.+. .| .+.|+|++.... ....|.|.++..+|+|.|+|.+.|.
T Consensus 12 ~~~~~v~~G~~v~l~C~v~~~-~~--------~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~ 82 (93)
T 1waa_A 12 LYGVEVFVGETAHFEIELSEP-DV--------HGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANT 82 (93)
T ss_dssp CCCEEEETTSCEEEEEEESSS-SC--------CCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTE
T ss_pred CcceEEeCCCCEEEEEEECCC-CC--------eEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCC
Confidence 456789999999999999763 34 599999982211 2247999999999999999998763
Q ss_pred CCCcEEEEEEEEe
Q psy6361 74 AGSTSKTIQMNVL 86 (148)
Q Consensus 74 ~~~~~~~~~l~v~ 86 (148)
.....|.|.
T Consensus 83 ----~~sa~L~V~ 91 (93)
T 1waa_A 83 ----KSAANLKVK 91 (93)
T ss_dssp ----EEEEEEEEE
T ss_pred ----cEEEEEEEE
Confidence 344556554
No 286
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.33 E-value=1.3e-11 Score=69.28 Aligned_cols=69 Identities=16% Similarity=0.058 Sum_probs=53.8
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE-----------ecCCceEEEecCCCCCCEEEEEEEEeCCCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY-----------VTRNGSFVINNIAEKDTNVYTCTVSNAAGS 76 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~-----------~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 76 (148)
..+..|+.+.|.|.+. .+.| .+.|+|++.. ......|.|.++..+|+|.|+|.+ +.
T Consensus 18 ~~v~~G~~v~l~C~~~-~p~~--------~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a----g~ 84 (100)
T 2yuv_A 18 YQVDKGGRVRFVVELA-DPKL--------EVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA----GD 84 (100)
T ss_dssp EEECTTEEEEEEEEES-CTTS--------CEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE----TT
T ss_pred cEEcCCCcEEEEEEec-CCCc--------eEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE----CC
Confidence 4677899999999998 5666 5999999711 112236999999999999999998 55
Q ss_pred cEEEEEEEEecCC
Q psy6361 77 TSKTIQMNVLVPP 89 (148)
Q Consensus 77 ~~~~~~l~v~~~p 89 (148)
......|.|..+|
T Consensus 85 ~~~~~~l~V~~~P 97 (100)
T 2yuv_A 85 EKCSTELFVRSGP 97 (100)
T ss_dssp EEEEEEEEECCSC
T ss_pred ceEEEEEEEecCC
Confidence 6667778887665
No 287
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.32 E-value=8.6e-12 Score=85.77 Aligned_cols=121 Identities=17% Similarity=0.264 Sum_probs=84.6
Q ss_pred eeeeEeeeccceeeeeecccCCCCc------CCCCccEEEEeeCC-------------E-------------E-------
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQS------RNPGQVIKRYLKDL-------------L-------------Y------- 46 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~------~~~~~~~v~W~~~~-------------~-------------~------- 46 (148)
....+..|++++|.|.....+.... .......+.||+.. . .
T Consensus 166 ~sv~a~~Ge~vtL~C~~S~~~~~~~a~~~~~~~~~~~~V~Wyrq~pg~~~~vliY~~g~~~q~~~~~~g~~~f~~~~~~~ 245 (401)
T 3f8u_B 166 PAPRVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAAWDDDE 245 (401)
T ss_dssp SSCEEETTSCEEECCEEEECCCTTC------CCSCCCEEEEEEEETTEEEEEEEECTTSCCCCCCCCTTCEEEEEESCCC
T ss_pred CcEEEeCCCCEEEEEeCCCCcccccccccccccCCceEEEEEEecCCCCcEEEEEeCCCccccccccCCeEEEEeecccc
Confidence 3467889999999999875431100 00112368998752 0 0
Q ss_pred ----ecCCceEEEecCCCCCCEEEEEEEEeCCCCcEEEEEEEEecCCEEEeCCCceEE-EecCC-cEEEEeeeecc-cC-
Q psy6361 47 ----VTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLVPPFFKDEQQESVA-IVVNH-PMNISCSHYGV-PT- 118 (148)
Q Consensus 47 ----~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~-~~~g~-~~~l~C~~~g~-p~- 118 (148)
...+.+|.|.+++.+|+|.|.|.+.+..+.....+.|.|..+|.+... +.... ...|+ .+.|.|.+.+. |.
T Consensus 246 ~~g~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~~pP~V~v~-p~~~~~~~~G~~~vtL~C~a~GfyP~~ 324 (401)
T 3f8u_B 246 PWGPWTGNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYKPPKVSLM-PATLARAAPGEAPPELLCLVSHFYPSG 324 (401)
T ss_dssp SSCCEEEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEE-SSSCCCCCTTCCCCCEEEEEEEEBSST
T ss_pred cccccCCcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeeccCCeEeec-cCcceeecCCCccEEEEEEecCCcCCC
Confidence 012356889999999999999999987776667778888888887765 43333 34675 79999999875 55
Q ss_pred -CeEEEE-ECC
Q psy6361 119 -PDFSWY-KDG 127 (148)
Q Consensus 119 -~~~~W~-~~g 127 (148)
+.++|+ +|+
T Consensus 325 ~~~VtW~~rdg 335 (401)
T 3f8u_B 325 GLEVEWELRGG 335 (401)
T ss_dssp TCEEEEEEESS
T ss_pred CcEEEEEecCC
Confidence 689995 875
No 288
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=2.6e-12 Score=74.06 Aligned_cols=77 Identities=13% Similarity=0.081 Sum_probs=60.2
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe------------cCCceEEEecCCCCCCEEEEEEEEeC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV------------TRNGSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~------------~~~~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
.+..+..|+.+.|.|.+.+.+.| .+.|+|++... .....|.|.++..+|+|.|+|.
T Consensus 21 ~~~~v~~G~~v~l~C~~~g~p~p--------~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~---- 88 (115)
T 2cr6_A 21 EDVDVQEGSSATFRCRISPANYE--------PVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFE---- 88 (115)
T ss_dssp CEEEEETTSCEECCCEEESTTCC--------SCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEE----
T ss_pred ccEEEeCCCcEEEEEEEcCCCCC--------ccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEE----
Confidence 45678899999999999998888 49999997211 1234799999999999999999
Q ss_pred CCCcEEEEEEEEecCCEEEeC
Q psy6361 74 AGSTSKTIQMNVLVPPFFKDE 94 (148)
Q Consensus 74 ~~~~~~~~~l~v~~~p~~~~~ 94 (148)
++.....+.|.|..+|.+...
T Consensus 89 ~g~~~~~~~L~V~~~p~~~~~ 109 (115)
T 2cr6_A 89 AGDQRASAALRVTEKPSVFSR 109 (115)
T ss_dssp ETTEECCEEEEEECCSSCCSS
T ss_pred ECCeeEEEEEEEECCCceecc
Confidence 345566678888877765433
No 289
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=4.2e-12 Score=71.66 Aligned_cols=72 Identities=19% Similarity=0.173 Sum_probs=55.4
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE---------e--cCCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY---------V--TRNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~---------~--~~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
....+..|+.+.|.|.+.+ +.| .+.|+|++.. . .....|.|.++..+|+|.|+|.+.|
T Consensus 16 ~~~~v~~G~~v~l~C~~~~-~~~--------~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n-- 84 (103)
T 2edf_A 16 EDQWVAPGEDVELRCELSR-AGT--------PVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA-- 84 (103)
T ss_dssp CCEEECTTSCEEECCEESS-SSC--------CCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS--
T ss_pred CccEEcCCCCEEEEEEEeC-CCC--------cEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc--
Confidence 4567889999999999987 555 4899998711 1 1123699999999999999999888
Q ss_pred CCcEEEEEEEEecCCE
Q psy6361 75 GSTSKTIQMNVLVPPF 90 (148)
Q Consensus 75 ~~~~~~~~l~v~~~p~ 90 (148)
....+.|.|..+|.
T Consensus 85 --~~~~~~l~V~~~p~ 98 (103)
T 2edf_A 85 --SKSTASLHVEEKAS 98 (103)
T ss_dssp --CEEEEEEEECCCSS
T ss_pred --CCcEEEEEEeCCCC
Confidence 35667778776554
No 290
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=9.7e-12 Score=70.27 Aligned_cols=70 Identities=13% Similarity=0.227 Sum_probs=54.2
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe-----------cCCceEEEecCCCCCCEEEEEEEEeCCCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV-----------TRNGSFVINNIAEKDTNVYTCTVSNAAGS 76 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~-----------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 76 (148)
..+..|+.+.|.|.+.+.+.| +.|+|++... .....|.|.++..+|+|.|+|.+.|..+
T Consensus 20 ~~v~~G~~v~l~C~~~~~p~~---------v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~- 89 (104)
T 2e6p_A 20 LTFTTSERVVLTCELSRVDFP---------ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGVSA- 89 (104)
T ss_dssp EEEESSSCEECCEECSSTTCC---------CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEECSSCCC-
T ss_pred EEEeCCCcEEEEEEecCCCCc---------cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEECCceE-
Confidence 578899999999999887765 7899997222 1234799999999999999999988643
Q ss_pred cEEEEEEEEecCCE
Q psy6361 77 TSKTIQMNVLVPPF 90 (148)
Q Consensus 77 ~~~~~~l~v~~~p~ 90 (148)
.+.|.|..+|.
T Consensus 90 ---~~~l~V~~~P~ 100 (104)
T 2e6p_A 90 ---FFGVTVQDPSG 100 (104)
T ss_dssp ---CEEEEEECCCC
T ss_pred ---EEEEEEcCCCC
Confidence 45666666553
No 291
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=99.30 E-value=7e-12 Score=73.40 Aligned_cols=76 Identities=13% Similarity=0.220 Sum_probs=55.8
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC------------------------E-Ee------cCCceE
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL------------------------L-YV------TRNGSF 53 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~------------------------~-~~------~~~~~l 53 (148)
.....+.+|+++.|.|.+.....+ ..+.+.|+|++ + .. ..+.+|
T Consensus 12 ~~~v~g~vG~~v~L~C~~~~~~~~-----~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL 86 (125)
T 4gos_A 12 TVASAGNIGEDGILSCTFEPDIKL-----SDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASL 86 (125)
T ss_dssp EECEEEETTSCEEEEEEECCCSCG-----GGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCE
T ss_pred CceEEEeCCCCEEEEEEEcCCccc-----CcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEE
Confidence 345677889999999998643322 12369999864 0 00 113479
Q ss_pred EEecCCCCCCEEEEEEEEeCCCCcEEEEEEEE
Q psy6361 54 VINNIAEKDTNVYTCTVSNAAGSTSKTIQMNV 85 (148)
Q Consensus 54 ~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v 85 (148)
.|.+++.+|+|.|+|.+.+..+.....+.|.|
T Consensus 87 ~I~~v~~~D~G~Y~C~v~~~~g~~~~~v~LkV 118 (125)
T 4gos_A 87 RLKNVQLTDAGTYKCYIITSKGKGNANLEYKT 118 (125)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EECCCChHHCEEEEEEEEeCCCeEEEEEEEEE
Confidence 99999999999999999998877777767665
No 292
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=1.3e-12 Score=72.91 Aligned_cols=71 Identities=11% Similarity=0.271 Sum_probs=55.2
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe--cCCceEEEecCCCCCCEEEEEEEEeCCCC--cEEEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV--TRNGSFVINNIAEKDTNVYTCTVSNAAGS--TSKTIQ 82 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~~~~~~--~~~~~~ 82 (148)
...+..|+.+.|.|.+.+.+.| .+.|+|++... .....|.|.++..+|+|.|+|.+.|..+. .+..+.
T Consensus 19 ~~~v~~G~~v~l~C~~~g~p~~--------~v~W~k~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~~~ 90 (96)
T 2ens_A 19 GGAVAPGGTVTLTCEVPAQPSP--------QIHWMKDGVPLPLPPSPVLILPEIGPQDQGTYSCVATHSSHGPQESRAVS 90 (96)
T ss_dssp TSEECTTCEEEEECCCSSCSSC--------CCCCEESSSBCSSCCCSEEEEESCCTTTCEEEECEECCSSCCCEECCCEE
T ss_pred CCEEcCCCeEEEEEEEccCCCC--------EEEEEECCEECcCCCCCEEEECCCCcccCEEEEEEEEeCCCCcEEEEEEE
Confidence 3457889999999999988877 59999987322 34678999999999999999999996544 333444
Q ss_pred EEE
Q psy6361 83 MNV 85 (148)
Q Consensus 83 l~v 85 (148)
|.|
T Consensus 91 v~V 93 (96)
T 2ens_A 91 ISI 93 (96)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 293
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.30 E-value=1.3e-11 Score=76.47 Aligned_cols=75 Identities=12% Similarity=0.126 Sum_probs=63.3
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-EEecCCceEEEecCCCCCCEEEEEEEEeCCCCcEEEEEEEEe
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-LYVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVL 86 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 86 (148)
..+..|+.+.|.|.+.+.|.| .+.|++++ ........|.|.++..+|+|.|+|.+.|..+..+..+.|.|.
T Consensus 107 ~~v~~g~~~~l~C~~~~~p~~--------~v~W~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~ 178 (184)
T 2ny1_B 107 THLLQGQSLTLTLESPPGSSP--------SVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVL 178 (184)
T ss_dssp SEEETTCCEEEEEECCTTCCC--------EEEEECTTSCEEEESSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ceeecCCCEEEEEEcCCCCCC--------EEEEEeCCCccccCceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEE
Confidence 467889999999999887766 69999987 445567899999999999999999999988877778888887
Q ss_pred cCCE
Q psy6361 87 VPPF 90 (148)
Q Consensus 87 ~~p~ 90 (148)
..|.
T Consensus 179 ~~p~ 182 (184)
T 2ny1_B 179 AFQK 182 (184)
T ss_dssp CCCC
T ss_pred ecCC
Confidence 6553
No 294
>3c6l_A TCR 2W20 alpha chain; TCR-PMHC complex; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.96 E-value=2.3e-13 Score=84.89 Aligned_cols=116 Identities=9% Similarity=0.072 Sum_probs=76.2
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC---------------------EE------ecCCceEEEec
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL---------------------LY------VTRNGSFVINN 57 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~---------------------~~------~~~~~~l~i~~ 57 (148)
.....+..|+.+.|.|.+.+...+ .+.||+.. +. ......|.|.+
T Consensus 7 p~~v~v~~G~svtL~C~~s~~~~~--------~v~Wyrq~~g~~~~~li~~~~~~~~~~~~R~s~~~~~~~~~~sL~I~~ 78 (185)
T 3c6l_A 7 PQSLTVWEGETAILNCSYEDSTFD--------YFPWYHQFPGESPALLIAIRPVSNKKEDGRFTIFFNKREKKFSLHIAD 78 (185)
Confidence 345678899999999998776544 48898853 00 01234799999
Q ss_pred CCCCCCEEEEEEEEeCCCCcEEEEEEEEecC-----CEEEeCCCceEEEecCCcEEEEeeeec-ccCCeEEEEECCEEee
Q psy6361 58 IAEKDTNVYTCTVSNAAGSTSKTIQMNVLVP-----PFFKDEQQESVAIVVNHPMNISCSHYG-VPTPDFSWYKDGSLLR 131 (148)
Q Consensus 58 ~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~-----p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~~~~W~~~g~~l~ 131 (148)
++.+|+|.|+|.+.+..........|.|... |.+... ... ...+.|.|.+.| .|.|.+.|+.+...+.
T Consensus 79 v~~~DsG~Y~C~~~~~~~~fg~gT~L~V~~~~~~~~P~V~~~-~~~-----~~~vtL~C~~~gf~P~p~v~~~~~~~~~~ 152 (185)
T 3c6l_A 79 SQPGDSATYFCAASDNRIFFGDGTQLVVKPNIQNPEPAVYQL-KDP-----RSQDSTLCLFTDFDSQINVPKTMESGTFI 152 (185)
Confidence 9999999999998752111222335555422 322222 111 126899999877 6899999987776665
Q ss_pred cCC
Q psy6361 132 IQS 134 (148)
Q Consensus 132 ~~~ 134 (148)
.+.
T Consensus 153 ~~~ 155 (185)
T 3c6l_A 153 TDK 155 (185)
Confidence 433
No 295
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.29 E-value=1.4e-11 Score=70.60 Aligned_cols=74 Identities=18% Similarity=0.221 Sum_probs=57.0
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE---------ecC--CceEEEecCCCCCCEEEEEEEEeCCCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY---------VTR--NGSFVINNIAEKDTNVYTCTVSNAAGS 76 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~---------~~~--~~~l~i~~~~~~d~g~y~C~~~~~~~~ 76 (148)
..+..|+.+.|.|.+. .+.| .+.|+|++.. ... ...|.|.++..+|+|.|+|.+.|
T Consensus 23 ~~~~~G~~v~L~C~~~-~p~~--------~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n---- 89 (113)
T 2cpc_A 23 VAAVRLERVVLTCELC-RPWA--------EVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD---- 89 (113)
T ss_dssp EEEETTCCEEEEEEES-CTTC--------CCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEEESSS----
T ss_pred EEEEcCCeEEEEEEec-CCCC--------eEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEEEEEec----
Confidence 4677899999999995 5555 5999999721 111 25799999999999999999877
Q ss_pred cEEEEEEEEecCCEEEeC
Q psy6361 77 TSKTIQMNVLVPPFFKDE 94 (148)
Q Consensus 77 ~~~~~~l~v~~~p~~~~~ 94 (148)
.+..+.|.|..+|.....
T Consensus 90 ~~~~~~l~V~~~p~~~~~ 107 (113)
T 2cpc_A 90 ESASFTVTVTEPPVRIIY 107 (113)
T ss_dssp CEEEEEEEEECCCCCCCC
T ss_pred CcEEEEEEEecCCchhcc
Confidence 556778888877765443
No 296
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.29 E-value=2.6e-11 Score=67.42 Aligned_cols=69 Identities=9% Similarity=0.094 Sum_probs=51.7
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe-----------cCCceEEEecCCCCCCEEEEEEEEeC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV-----------TRNGSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~-----------~~~~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
.....+..|+.+.|.|.+ +.+.| .+.|+|++... .....|.|.++..+|+|.|+|.+
T Consensus 15 ~~~~~v~~G~~v~l~C~~-~~p~~--------~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a--- 82 (95)
T 2k1m_A 15 PRSVEVAAGSPAVFEAET-ERAGV--------KVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA--- 82 (95)
T ss_dssp CCCEEEETTSCEEEEEEC-SSSSC--------CCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE---
T ss_pred CCcEEEeCCCcEEEEEEe-CCCCC--------eEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE---
Confidence 345778999999999999 55655 59999997211 12246999999999999999998
Q ss_pred CCCcEEEEEEEEe
Q psy6361 74 AGSTSKTIQMNVL 86 (148)
Q Consensus 74 ~~~~~~~~~l~v~ 86 (148)
+.....+.|.|.
T Consensus 83 -g~~~~~~~l~V~ 94 (95)
T 2k1m_A 83 -GSSKVKFDLKVI 94 (95)
T ss_dssp -TTEEEEEEEEEE
T ss_pred -CCceEEEEEEEe
Confidence 444555666553
No 297
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.29 E-value=3.7e-12 Score=80.78 Aligned_cols=69 Identities=10% Similarity=0.147 Sum_probs=56.5
Q ss_pred eeEeeeccceeeeeeccc-CCCCcCCCCccEEEEeeCCEEec---------CCceEEEecCCCCCCEEEEEEEEeCCCCc
Q psy6361 8 EQAMLLDLIPMHSRYNYT-NLPQSRNPGQVIKRYLKDLLYVT---------RNGSFVINNIAEKDTNVYTCTVSNAAGST 77 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~-~~p~~~~~~~~~v~W~~~~~~~~---------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 77 (148)
..+..|+.+.|.|.+.+. |.| .+.|+|++.... ....|.|.++..+|+|.|+|.+.|..|..
T Consensus 126 ~~v~~g~~v~l~C~v~g~~P~p--------~i~W~k~g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~ 197 (207)
T 3rbs_A 126 WEVTGECNVLLKCKVANIKKET--------HIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKD 197 (207)
T ss_dssp EEEETTTEEEEEEEEESCCTTC--------EEEEEETTEEECCCCCCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEE
T ss_pred cEEcCCCcEEEEEEEeCCCCCC--------EEEEEECCEECCCCCceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEE
Confidence 467789999999999998 777 699999983331 12369999999999999999999999987
Q ss_pred EEEEEEE
Q psy6361 78 SKTIQMN 84 (148)
Q Consensus 78 ~~~~~l~ 84 (148)
...+.|.
T Consensus 198 ~~~~~L~ 204 (207)
T 3rbs_A 198 KSRLKLV 204 (207)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 7666654
No 298
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.29 E-value=7.6e-12 Score=69.23 Aligned_cols=56 Identities=13% Similarity=0.209 Sum_probs=43.5
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC---------EE--ecCCceEEEecCCCCCCEEEEEEEEe
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL---------LY--VTRNGSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~---------~~--~~~~~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
..+..|+.+.|.|.+.+ +.| .+.|+|+| .. ......|.|.++..+|+|.|+|.|.|
T Consensus 16 v~~~~g~~v~l~C~v~~-p~~--------~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 82 (91)
T 2lvc_A 16 VHAITSECVMLACEVDR-EDA--------PVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGD 82 (91)
T ss_dssp EECCTTCCEEEEEECSC-TTS--------CCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSS
T ss_pred EEEECCCcEEEEEEECC-CCc--------EEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcc
Confidence 34568999999999865 555 48999997 11 12234799999999999999999755
No 299
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.28 E-value=1.5e-11 Score=79.05 Aligned_cols=115 Identities=13% Similarity=0.129 Sum_probs=75.1
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E----Ee-----------------------cCCceEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L----YV-----------------------TRNGSFV 54 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~----~~-----------------------~~~~~l~ 54 (148)
...+..|+.+.|.|.+.+..... ..+.||+.. . .. .....|.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~------~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 82 (230)
T 3n9g_H 9 AEVRKPGASTKVSCKASGYTFTH------YYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYME 82 (230)
T ss_dssp CEEECTTCCEEEEEEEESSCGGG------SCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred CEEEcCCCCEEEEEEeecceecC------cEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEE
Confidence 46788999999999997532110 158898742 0 00 0112499
Q ss_pred EecCCCCCCEEEEEEEEeCC-----CC---cEEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEeeeecc-c-CCe
Q psy6361 55 INNIAEKDTNVYTCTVSNAA-----GS---TSKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCSHYGV-P-TPD 120 (148)
Q Consensus 55 i~~~~~~d~g~y~C~~~~~~-----~~---~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p-~~~ 120 (148)
|.+++.+|+|.|.|.+.+.. +. ......|.|. .+|.+... .....+.+|+.+.|.|.+.+. | .+.
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~-~~~~~~~~g~~v~L~C~~~~~~P~~~~ 161 (230)
T 3n9g_H 83 LSSLRSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPL-APSSKSTSGGTAALGCLVKDYFPEPVT 161 (230)
T ss_dssp ECSCCGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEE-CCCCCCCTTCEEEEEEEEEEEBSSCCE
T ss_pred ECCCChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEec-CCCccccCCCCEEEEEEEEeEECCCEE
Confidence 99999999999999998753 11 1233456664 34555543 333345688999999998774 4 346
Q ss_pred EEEEECCEEe
Q psy6361 121 FSWYKDGSLL 130 (148)
Q Consensus 121 ~~W~~~g~~l 130 (148)
+.| ++..+
T Consensus 162 v~W--~~~~~ 169 (230)
T 3n9g_H 162 VSW--NSGAL 169 (230)
T ss_dssp EEE--GGGTB
T ss_pred EEE--CCccc
Confidence 889 65544
No 300
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.28 E-value=3.9e-11 Score=75.61 Aligned_cols=73 Identities=19% Similarity=0.244 Sum_probs=60.4
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEecC------------CceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTR------------NGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~~------------~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
...+..|+.+.|.|.+.+.|.| .+.|++++..... ...|.|.++..+|+|.|+|.+.|..
T Consensus 126 ~~~v~~g~~~~l~C~~~g~p~p--------~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~ 197 (212)
T 2r15_A 126 VVTIQEGKALNLTCNVWGDPPP--------EVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKY 197 (212)
T ss_dssp EEEEETTCCEEEEEEEECSSCC--------EEEEEETTEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred cEEEccCCeEEEEEEEcCCCCc--------eEEEEECCeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCC
Confidence 4578889999999999998888 6999999822221 2389999999999999999999999
Q ss_pred CCcEEEEEEEEec
Q psy6361 75 GSTSKTIQMNVLV 87 (148)
Q Consensus 75 ~~~~~~~~l~v~~ 87 (148)
+.....+.|.|..
T Consensus 198 g~~~~~~~l~V~~ 210 (212)
T 2r15_A 198 GSETSDFTVSVFI 210 (212)
T ss_dssp EEEEEEEEEEEEC
T ss_pred CcEEEEEEEEEEc
Confidence 8877777777753
No 301
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.28 E-value=2.2e-11 Score=80.89 Aligned_cols=114 Identities=18% Similarity=0.209 Sum_probs=78.0
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE-----------ecCCceEEEec-CCCCCCEEEEEEEEeCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY-----------VTRNGSFVINN-IAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~-----------~~~~~~l~i~~-~~~~d~g~y~C~~~~~~ 74 (148)
...+..|+.+.|.|.+.+.+.| .+.|++++.. ......|.|.+ +..+|+|.|+|.+.|..
T Consensus 113 ~~~~~~g~~~~l~C~~~g~p~p--------~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~ 184 (305)
T 2nzi_A 113 AVHALRGEVVSIKIPFSGKPDP--------VITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRF 184 (305)
T ss_dssp CEEEETTCCEEEEEEEEEESCC--------EEEEEESSSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETT
T ss_pred cEEecCCCEEEEEEEECCCCCC--------EEEEEECCEECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCC
Confidence 3556779999999999998888 6999998711 11335788888 99999999999999999
Q ss_pred CCcEEEEEEEEecCCEEEeC------CCceEEE------ecCCcEEEEeeeecccCCeEEEEECCE
Q psy6361 75 GSTSKTIQMNVLVPPFFKDE------QQESVAI------VVNHPMNISCSHYGVPTPDFSWYKDGS 128 (148)
Q Consensus 75 ~~~~~~~~l~v~~~p~~~~~------~~~~~~~------~~g~~~~l~C~~~g~p~~~~~W~~~g~ 128 (148)
+.....+.|.|...|..... ......+ ..|....+.|.+...+.+...|++.+.
T Consensus 185 G~~~~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~~~ 250 (305)
T 2nzi_A 185 GIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRVGQ 250 (305)
T ss_dssp EEEEEEEEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCEEEEEE
T ss_pred CceeeEEEEEEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCCCccEECcc
Confidence 98777888888754432111 0111111 123334556666666666677876544
No 302
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=2e-12 Score=72.85 Aligned_cols=71 Identities=13% Similarity=0.174 Sum_probs=53.1
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEecC---------------CceEEEecCCCCCCEEEEEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTR---------------NGSFVINNIAEKDTNVYTCTV 70 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~~---------------~~~l~i~~~~~~d~g~y~C~~ 70 (148)
.+..+..|+.+.|.|.+.+.+ | .+.|+|++..... ...|.|.++..+|+|.|+|.+
T Consensus 16 ~~~~v~~G~~v~l~C~~~~~~-~--------~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 86 (101)
T 2edk_A 16 EDQQVFVGDRVEMAVEVSEEG-A--------QVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVIT 86 (101)
T ss_dssp CCEEEESSCCCBCCEEESCSS-C--------CCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEEC
T ss_pred CceEEcCCCCEEEEEEEeCCC-C--------EEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEEE
Confidence 457889999999999999887 6 5999999721111 135999999999999999998
Q ss_pred EeCCCCcEEEEEEEEecCC
Q psy6361 71 SNAAGSTSKTIQMNVLVPP 89 (148)
Q Consensus 71 ~~~~~~~~~~~~l~v~~~p 89 (148)
.| ......|.|..+|
T Consensus 87 ~n----~~~~~~l~V~~~P 101 (101)
T 2edk_A 87 NG----GQCEAELIVEEKQ 101 (101)
T ss_dssp SS----CEECCBEEEECCC
T ss_pred cC----CcEEEEEEEeCCC
Confidence 76 3344456665543
No 303
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.27 E-value=2e-11 Score=70.43 Aligned_cols=74 Identities=18% Similarity=0.187 Sum_probs=54.4
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe-------------cCCceEEEe-----cCCCCCCEEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV-------------TRNGSFVIN-----NIAEKDTNVYT 67 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~-------------~~~~~l~i~-----~~~~~d~g~y~ 67 (148)
....+..|+.+.|.|.+.+.|.| .+.|+|++... ..+..+.+. +++.+|+|.|+
T Consensus 17 ~~~~v~~G~~v~L~C~~~g~P~p--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~Y~ 88 (117)
T 2v9t_A 17 SDLIVSKGEPATLNCKAEGRPTP--------TIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYV 88 (117)
T ss_dssp CCEEECTTCCEEECCEEEEESCC--------EEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEEEE
T ss_pred CCEEEcCCCcEEEEEECCccCCC--------eEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEEEE
Confidence 34568899999999999999988 69999997222 223344444 44789999999
Q ss_pred EEEEeCCCC-cEEEEEEEEec
Q psy6361 68 CTVSNAAGS-TSKTIQMNVLV 87 (148)
Q Consensus 68 C~~~~~~~~-~~~~~~l~v~~ 87 (148)
|.+.|..|. ....+.+.+..
T Consensus 89 C~a~N~~G~~~s~~~~l~~~~ 109 (117)
T 2v9t_A 89 CVARNYLGEAVSHDASLEVAA 109 (117)
T ss_dssp EEEEETTEEEECCCEEEEEC-
T ss_pred EEEEeCccceEeeeEEEEhhh
Confidence 999999987 34455666554
No 304
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.27 E-value=1.8e-11 Score=73.33 Aligned_cols=78 Identities=15% Similarity=0.131 Sum_probs=61.1
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEee---------CCE-----------EecCCceEEEecCCCCCCE
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLK---------DLL-----------YVTRNGSFVINNIAEKDTN 64 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~---------~~~-----------~~~~~~~l~i~~~~~~d~g 64 (148)
.....+..|+.+.|.|.+.+.+.+ .+.|++ ++. .......|.|.+++.+|+|
T Consensus 45 p~~~~v~~G~~v~L~C~~~~~~~~--------~i~W~~~~~~~i~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG 116 (145)
T 1z9m_A 45 TSDETVVAGGTVVLKCQVKDHEDS--------SLQWSNPAQQTLYFGEKRALRDNRIQLVTSTPHELSISISNVALADEG 116 (145)
T ss_dssp CCCEEEETTSCEEEEEECSCCTTC--------CEEEECTTCCEEEETTEECSCCTTEEEEEECSSEEEEEECSCCGGGCE
T ss_pred CceEEEEcCCCEEEEEEEcCCCCc--------EEEEECCCCcEEEECCceecccCCEEEecCCCCeEEEEECCCChhhCE
Confidence 345788999999999999988766 599994 320 1112467999999999999
Q ss_pred EEEEEEEeCCCCcEEEEEEEEecCCEE
Q psy6361 65 VYTCTVSNAAGSTSKTIQMNVLVPPFF 91 (148)
Q Consensus 65 ~y~C~~~~~~~~~~~~~~l~v~~~p~~ 91 (148)
.|+|.+.|. +.....+.|.|..+|..
T Consensus 117 ~Y~C~~~n~-~~~~~~~~L~V~~~P~~ 142 (145)
T 1z9m_A 117 EYTCSIFTM-PVRTAKSLVTVLGIPQK 142 (145)
T ss_dssp EEEEEECSS-SCEEEEEEEEEECCCC-
T ss_pred EEEEEEEcC-CCceEEEEEEEEeCCCC
Confidence 999999998 77788888888876643
No 305
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.27 E-value=1.3e-11 Score=70.22 Aligned_cols=73 Identities=14% Similarity=0.163 Sum_probs=55.4
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEecC-------------------CceEEEecCCCCCCEEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTR-------------------NGSFVINNIAEKDTNVYT 67 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~~-------------------~~~l~i~~~~~~d~g~y~ 67 (148)
...+..|+.+.|.|.+.+.+.|. ..+.|+|++..... ...|.|.++..+|+|.|+
T Consensus 19 ~~~v~~G~~v~L~C~~~~~~~~~------~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 92 (112)
T 3so5_A 19 TQSAIXGSDVSFTCSAASSSDSP------MTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQ 92 (112)
T ss_dssp CEEECTTCCEEEEEEEEESCCCC------CEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGCEEEE
T ss_pred CcEEECCCCEEEEEEEecCCCCC------EEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccCCeEE
Confidence 45788899999999999664321 17999999722111 258999999999999999
Q ss_pred EEEEeCCCC-cEEEEEEEE
Q psy6361 68 CTVSNAAGS-TSKTIQMNV 85 (148)
Q Consensus 68 C~~~~~~~~-~~~~~~l~v 85 (148)
|.+.|..+. .+..+.|.|
T Consensus 93 C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 93 CVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp EEEEETTEEEECCCEEEEE
T ss_pred EEEEeCCCcEEEeEEEEEe
Confidence 999998876 445556655
No 306
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.27 E-value=9.5e-12 Score=70.60 Aligned_cols=60 Identities=12% Similarity=0.141 Sum_probs=48.5
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE---------Ee--cCCceEEEecCCCCCCEEEEEEEEeC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL---------YV--TRNGSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~---------~~--~~~~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
..+..+..|+.+.|.|.+.+.+.| +.|+|++. .. .....|.|.++..+|+|.|+|.+.|.
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~~~~---------v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 85 (106)
T 2dlt_A 15 IADLTVKAAEQAVFKCEVSDEKVT---------GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGY 85 (106)
T ss_dssp CCCEEEESSCCEECCCEESCSSCE---------EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEETS
T ss_pred CCCeEEeCCCeEEEEEEEcCCCcc---------eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEccC
Confidence 345788999999999999876553 89999971 11 12247999999999999999999997
No 307
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.27 E-value=1.7e-11 Score=79.92 Aligned_cols=114 Identities=12% Similarity=0.142 Sum_probs=71.4
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E----Ee-----------------------cCCceEEE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L----YV-----------------------TRNGSFVI 55 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~----~~-----------------------~~~~~l~i 55 (148)
..+..|+.+.|.|.+.+..... ..+.||+.. . .. .....|.|
T Consensus 33 ~~v~~G~~v~L~C~~~~~~~~~------~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 106 (256)
T 3sob_H 33 GLVQPGGSLRLSCAASGFTFTN------SYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQM 106 (256)
T ss_dssp CEECTTCCEEEEEEEESSCGGG------SCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEE
T ss_pred EEEcCCCCEEEEEEeeccccCC------CEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEE
Confidence 4688999999999997532111 158898742 0 00 01124999
Q ss_pred ecCCCCCCEEEEEEEEeCCC-----------CcEEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEeeeec-cc-C
Q psy6361 56 NNIAEKDTNVYTCTVSNAAG-----------STSKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCSHYG-VP-T 118 (148)
Q Consensus 56 ~~~~~~d~g~y~C~~~~~~~-----------~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p-~ 118 (148)
.+++.+|+|.|.|.+.+..+ .......|.|. .+|.+... .+...+.+|+.+.|.|.+.+ .| .
T Consensus 107 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~~g~~v~L~C~~~~~~p~~ 185 (256)
T 3sob_H 107 NSLRAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPL-APSSKSTSGGTAALGCLVKDYFPEP 185 (256)
T ss_dssp CSCCGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEE-CCC-----TTEEEEEEEEEEEBSSC
T ss_pred CCCCcccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEE-CCCcccccCCcEEEEEEEEEEECCC
Confidence 99999999999999986431 12223456664 34555543 33445668999999999877 44 3
Q ss_pred CeEEEEECCEEe
Q psy6361 119 PDFSWYKDGSLL 130 (148)
Q Consensus 119 ~~~~W~~~g~~l 130 (148)
+.+.| ++..+
T Consensus 186 ~~v~W--~~~~~ 195 (256)
T 3sob_H 186 VTVSW--NSGAL 195 (256)
T ss_dssp CEEEE--GGGTB
T ss_pred eEEEE--CCccc
Confidence 47889 55443
No 308
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.26 E-value=1.4e-11 Score=77.67 Aligned_cols=80 Identities=20% Similarity=0.255 Sum_probs=59.6
Q ss_pred eeeEeeeccceeeeee-cccCCCCcCCCCccEEEEeeCCEEec--------CCceEEEecCCCCCCEEEEEEEEeCCCCc
Q psy6361 7 VEQAMLLDLIPMHSRY-NYTNLPQSRNPGQVIKRYLKDLLYVT--------RNGSFVINNIAEKDTNVYTCTVSNAAGST 77 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~-~~~~~p~~~~~~~~~v~W~~~~~~~~--------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 77 (148)
...+..|+.+.|.|.+ .+.+.| .+.|++++.... ....|.|.++..+|+|.|+|.+.|..+..
T Consensus 120 ~~~~~~g~~~~l~C~~~~~~p~~--------~v~W~~~~~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~ 191 (212)
T 2v9r_A 120 DVMVAVGEPAVMECQPPRGHPEP--------TISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGER 191 (212)
T ss_dssp CEEEETTSCEEEECBCCCEESCC--------EEEEEETTEEECTTSTTEEEETTEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred ceEecCCCcEEEEEecCCCCCCC--------EEEEEECCccCCCCcceEEccCCeEEEeeCCHhhCeeEEEEEecccCce
Confidence 4567889999999998 777777 699999983322 34589999999999999999999998874
Q ss_pred EE-EEEEEEecCCEEEeC
Q psy6361 78 SK-TIQMNVLVPPFFKDE 94 (148)
Q Consensus 78 ~~-~~~l~v~~~p~~~~~ 94 (148)
.. .+.|.|..+|.+...
T Consensus 192 ~s~~~~l~V~~~P~~~~~ 209 (212)
T 2v9r_A 192 ESEVAELTVLERPSFVKA 209 (212)
T ss_dssp ECCCEEEEEEC-------
T ss_pred ecceEEEEEEeCchHhhh
Confidence 33 478888888877654
No 309
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.26 E-value=8.4e-12 Score=81.90 Aligned_cols=110 Identities=13% Similarity=0.144 Sum_probs=68.9
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EEe--------------------------cCCceEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LYV--------------------------TRNGSFVI 55 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~~--------------------------~~~~~l~i 55 (148)
...+..|+.+.|.|.+.+..... ..+.||+.. ... .....|.|
T Consensus 9 ~v~v~~G~~v~L~C~~~~~~~~~------~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 82 (263)
T 3iu4_H 9 PGLVAPSQSLSITCTVSGFSLSR------YSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKM 82 (263)
T ss_dssp CSEECTTSCEEEEEEEESSCGGG------SCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEE
T ss_pred CEEEcCCCCEEEEEEeccccCCc------eEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEE
Confidence 35688999999999997543110 158998742 000 01224999
Q ss_pred ecCCCCCCEEEEEEEEeCCC--------CcEEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEeeeecc-c-CCeE
Q psy6361 56 NNIAEKDTNVYTCTVSNAAG--------STSKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCSHYGV-P-TPDF 121 (148)
Q Consensus 56 ~~~~~~d~g~y~C~~~~~~~--------~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p-~~~~ 121 (148)
.+++.+|+|.|.|.+.+... .......|.|. .+|.+... .....+.+|+.+.|.|.+.+. | .+.+
T Consensus 83 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~-~~~~~~~~g~~~~L~C~~~~~~P~~~~v 161 (263)
T 3iu4_H 83 NSLQTDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPL-APSSKGSTSGTAALGCLVKDYFPEPVTV 161 (263)
T ss_dssp CSCCGGGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEE-CCCCCC----EEEEEEEEEEEBSSCCEE
T ss_pred CCCCHHHCEEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEc-cCccccccCCcEEEEEEEEeEeCCceEE
Confidence 99999999999999987531 11223456664 34555533 223334578899999998774 4 3679
Q ss_pred EE
Q psy6361 122 SW 123 (148)
Q Consensus 122 ~W 123 (148)
+|
T Consensus 162 ~W 163 (263)
T 3iu4_H 162 SW 163 (263)
T ss_dssp EE
T ss_pred EE
Confidence 99
No 310
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.26 E-value=1.9e-11 Score=77.42 Aligned_cols=76 Identities=22% Similarity=0.256 Sum_probs=58.2
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec--------------CCceEEEecCCCCCCEEEEEEEEeC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT--------------RNGSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~--------------~~~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
..+..|+.+.|.|.+.+.|.| .+.|++++.... ....|.|.++..+|+|.|+|.+.|.
T Consensus 118 ~~~~~g~~v~l~C~~~g~p~p--------~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~ 189 (212)
T 2yd6_A 118 KVVERTRTATMLCAASGNPDP--------EITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNS 189 (212)
T ss_dssp EEEETTSCEEEEEEEECSSCC--------EEEEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred eeEecCCCEEEEEEecCCCCC--------eEEEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECC
Confidence 456779999999999988877 699999972221 2378999999999999999999999
Q ss_pred CCC-cEEEEEEEEecCCEE
Q psy6361 74 AGS-TSKTIQMNVLVPPFF 91 (148)
Q Consensus 74 ~~~-~~~~~~l~v~~~p~~ 91 (148)
.|. .+..+.|.+...|.+
T Consensus 190 ~G~~~s~~a~l~~~~~~~~ 208 (212)
T 2yd6_A 190 AGTRYSAPANLYVRGTKHH 208 (212)
T ss_dssp TEEEECCCEEEEEEC----
T ss_pred CCccccccccEEEEecccc
Confidence 987 345567777766654
No 311
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.25 E-value=2.6e-11 Score=76.95 Aligned_cols=78 Identities=10% Similarity=0.087 Sum_probs=58.7
Q ss_pred eEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE------E-e------------cCCceEEEecCCCCCCEEEEEE
Q psy6361 9 QAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL------Y-V------------TRNGSFVINNIAEKDTNVYTCT 69 (148)
Q Consensus 9 ~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~------~-~------------~~~~~l~i~~~~~~d~g~y~C~ 69 (148)
.+..|+.+.|.|.+.+.+.+. ..+.|++++. . . .....|.|.+++.+|+|.|+|.
T Consensus 116 ~v~~G~~v~L~C~~~g~p~~~------~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 189 (213)
T 2x1w_L 116 ELSVGEKLVLNCTARTELNVG------IDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCA 189 (213)
T ss_dssp EEETTCCEEEEEEEEECTTBC------CEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEE
T ss_pred EEcCCCCEEEEEEEECCCCCc------eEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEE
Confidence 678999999999999865431 1699999861 1 0 1123599999999999999999
Q ss_pred EEeCCCCcEEEEEEEEecCCEEE
Q psy6361 70 VSNAAGSTSKTIQMNVLVPPFFK 92 (148)
Q Consensus 70 ~~~~~~~~~~~~~l~v~~~p~~~ 92 (148)
+.|..+..+..+.|.|..+|.+.
T Consensus 190 a~N~~g~~~~~~~l~V~~~p~i~ 212 (213)
T 2x1w_L 190 ASSGLMTKKNSTFVRVHEDPIEG 212 (213)
T ss_dssp EECSSCEEEEEEEEEEEC-----
T ss_pred EecCCCcEEEEEEEEEecccccC
Confidence 99999988888899998877653
No 312
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.25 E-value=5.1e-11 Score=68.28 Aligned_cols=71 Identities=14% Similarity=0.169 Sum_probs=54.5
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE--------Eec---CCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL--------YVT---RNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~--------~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
....+..|+.+.|.|.+.+. | .+.|+|++. ... ....|.|.++..+|+|.|+|.+
T Consensus 27 ~~~~v~~G~~v~l~C~~~~~--p--------~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a---- 92 (113)
T 2edh_A 27 RNEEATEGATAVLRCELSKM--A--------PVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC---- 92 (113)
T ss_dssp CCCEECTTSCEEEEEEESSC--C--------CCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTCEEEEEEE----
T ss_pred CceEEeCCCeEEEEEEECCC--C--------cEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhhCEEEEEEe----
Confidence 34578889999999999664 5 489999871 111 1237999999999999999998
Q ss_pred CCcEEEEEEEEecCCE
Q psy6361 75 GSTSKTIQMNVLVPPF 90 (148)
Q Consensus 75 ~~~~~~~~l~v~~~p~ 90 (148)
+.....+.|.|..+|.
T Consensus 93 ~~~~~~~~l~V~~~p~ 108 (113)
T 2edh_A 93 GKERTSAMLTVRAMPS 108 (113)
T ss_dssp TTEEEEEEEEECCCCC
T ss_pred CCCCEEEEEEEeCCCC
Confidence 5566777888876654
No 313
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.25 E-value=3.9e-11 Score=74.27 Aligned_cols=71 Identities=20% Similarity=0.291 Sum_probs=58.6
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE---------EecCCceEEEecCCCCCCEEEEEEEEeCCCCcE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL---------YVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTS 78 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~---------~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 78 (148)
..+..|+.+.|.|.+.+.|.| .+.|++++. .......|.|.++..+|+|.|+|.+.|..+...
T Consensus 108 ~~~~~g~~v~l~C~~~g~p~~--------~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 179 (189)
T 2v5t_A 108 ATAERGEEMTFSCRASGSPEP--------AISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDE 179 (189)
T ss_dssp EETTSCCCEEEECEEEEESCC--------EEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred ccccCCCcEEEEEEEccCCCC--------eEEEEECCEECcCCCcEEEecCCCEEEEcCCChhhCeeEEEEEEeCCCcee
Confidence 455679999999999988777 699999972 223356799999999999999999999998877
Q ss_pred EEEEEEEe
Q psy6361 79 KTIQMNVL 86 (148)
Q Consensus 79 ~~~~l~v~ 86 (148)
..+.|.|.
T Consensus 180 ~~~~l~V~ 187 (189)
T 2v5t_A 180 KQAFLQVF 187 (189)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 77777764
No 314
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.25 E-value=8e-12 Score=80.14 Aligned_cols=110 Identities=13% Similarity=0.084 Sum_probs=71.4
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E----Ee-----------------------cCCceEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L----YV-----------------------TRNGSFV 54 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~----~~-----------------------~~~~~l~ 54 (148)
...+..|+.+.|.|.+.+...+. ..+.||+.. . .. .....|.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~------~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 82 (226)
T 3mlr_H 9 GEVKQPGQSLKISCKSSGYNFLD------SWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQ 82 (226)
T ss_dssp CEEECTTCCEEEEEEEESSCGGG------SCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEE
T ss_pred CEEEecCCCEEEEEEecCccccC------CEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEE
Confidence 46789999999999997532111 158998842 0 00 0123499
Q ss_pred EecCCCCCCEEEEEEEEeCCC---------CcEEEEEEEEe----cCCEEEeCCCceEEEecCCcEEEEeeeecc-c-CC
Q psy6361 55 INNIAEKDTNVYTCTVSNAAG---------STSKTIQMNVL----VPPFFKDEQQESVAIVVNHPMNISCSHYGV-P-TP 119 (148)
Q Consensus 55 i~~~~~~d~g~y~C~~~~~~~---------~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p-~~ 119 (148)
|.+++.+|+|.|.|.+.+..+ .......|.|. .+|.+... +......+|..+.|.|.+.+. | .+
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~ 161 (226)
T 3mlr_H 83 WTTLQASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPL-APSSKSTSGGTAALGCLVKDYFPEPV 161 (226)
T ss_dssp ESSCCGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEE-EEEECSTTSSEEEEEEEEEEEBSSCC
T ss_pred ECCCCcccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEe-cCcccccCCCCEEEEEEEEEEECCCe
Confidence 999999999999999876421 11122355554 34555433 333344578899999998774 4 45
Q ss_pred eEEE
Q psy6361 120 DFSW 123 (148)
Q Consensus 120 ~~~W 123 (148)
.+.|
T Consensus 162 ~v~W 165 (226)
T 3mlr_H 162 TVSW 165 (226)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7899
No 315
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.25 E-value=4.7e-11 Score=74.56 Aligned_cols=72 Identities=21% Similarity=0.228 Sum_probs=60.6
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-------EEecCCceEEEecCCCCCCEEEEEEEEeCCCCcEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-------LYVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSK 79 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 79 (148)
...+..|+.+.|.|.+.+.|.| .+.|++++ ........|.|.++..+|+|.|+|.+.|..+....
T Consensus 122 ~~~~~~g~~~~l~C~~~g~p~p--------~v~W~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 193 (201)
T 3s97_C 122 DVYALMGQNVTLECFALGNPVP--------DIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKH 193 (201)
T ss_dssp CEEEETTCCEEEEEEEEEESCC--------EEEEEETTBCCCTTCEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred ceEEecCCcEEEEEEccCCCCC--------ceEEEeCCCcCCCceeecCCCCEEEEccCChhhCEEEEEEEEecCCceee
Confidence 4557789999999999988877 69999987 33445679999999999999999999999988777
Q ss_pred EEEEEEe
Q psy6361 80 TIQMNVL 86 (148)
Q Consensus 80 ~~~l~v~ 86 (148)
.+.|.|.
T Consensus 194 ~~~l~V~ 200 (201)
T 3s97_C 194 QARIYVQ 200 (201)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 7777664
No 316
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.25 E-value=1.5e-10 Score=72.55 Aligned_cols=117 Identities=13% Similarity=0.022 Sum_probs=83.5
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC---EEe--cCCceEEEecCCCCCCEEEEEEEEeCCCCcEEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL---LYV--TRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTI 81 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~---~~~--~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 81 (148)
...+..|+++.|.|...- +.|. .+.|.-.- ... .....+.+.+++ +|.+.|.|.+..........+
T Consensus 11 ~~~V~~G~Sv~l~Cs~~c-~~p~-------~~~~~t~l~~~~~~~g~~~~~~~ls~vs-~d~~~~~C~~~c~~~~~~~~v 81 (196)
T 3bn3_B 11 VAFVERGGSLWLNCSTNC-PRPE-------RGGLETSLRRNGTQRGLRWLARQLVDIR-EPETQPVCFFRCARRTLQARG 81 (196)
T ss_dssp EEEEETTEEEEEEEEECC-SSCS-------EEEEECSSEEEEEEEETTEEEEEEEEEC-SSEECCEEEEEETTEEEEEEC
T ss_pred CcEEcCCCeEEEEEeCCC-CCCC-------ccEEEEccCCeeEccccCceEEEEEEEc-cCCCceEEEEECCCCceEEEE
Confidence 356889999999999864 4443 46664331 111 122348889998 887879999877555577788
Q ss_pred EEEEecCCEEEeCCCceEEEecCCcEEEEeeeecc-cCC--eEEEEECCEEeec
Q psy6361 82 QMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGV-PTP--DFSWYKDGSLLRI 132 (148)
Q Consensus 82 ~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~--~~~W~~~g~~l~~ 132 (148)
.|.|...|......+....+.+|+.+.+.|.+.+. |.. .+.|||+++.+..
T Consensus 82 ~l~Vy~~P~~v~i~~~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~~ 135 (196)
T 3bn3_B 82 LIRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIR 135 (196)
T ss_dssp EEEEEBCCCCCEECCCCSSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEEE
T ss_pred EEEEecCCCcCEEccCCccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEeec
Confidence 89998777665542333458999999999999775 443 3799999998863
No 317
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.24 E-value=2.8e-11 Score=75.19 Aligned_cols=75 Identities=21% Similarity=0.247 Sum_probs=59.2
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE--------EecCCceEEEecCCCCCCEEEEEEEEeCCCCc-
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL--------YVTRNGSFVINNIAEKDTNVYTCTVSNAAGST- 77 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~--------~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~- 77 (148)
...+..|+.+.|.|.+.+.+.| .+.|++++. .......|.|.++..+|+|.|+|.+.|..+..
T Consensus 109 ~~~~~~g~~~~l~C~~~g~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 180 (192)
T 2iep_A 109 NVKIIEGLKAVLPCTTMGNPKP--------SVSWIKGDSALRENSRIAVLESGSLRIHNVQKEDAGQYRCVAKNSLGTAY 180 (192)
T ss_dssp CEEEETTSCEEECCEEEEESCC--------EEEEEETTEECCCCSSEEECTTSCEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred ceEEeCCCcEEEEEEEeccCCc--------eEEEEeCCEEccCCCcEEEecCCcEEEecCChhhCEEEEEEEEcCCCcEE
Confidence 3567789999999999988877 699999872 23345689999999999999999999998864
Q ss_pred EEEEEEEEecCC
Q psy6361 78 SKTIQMNVLVPP 89 (148)
Q Consensus 78 ~~~~~l~v~~~p 89 (148)
+..+.|.|..+|
T Consensus 181 s~~~~l~V~~pp 192 (192)
T 2iep_A 181 SKLVKLEVEVFA 192 (192)
T ss_dssp CCCEEEEEEC--
T ss_pred EEEEEEEEEeCC
Confidence 445777776554
No 318
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.23 E-value=4e-10 Score=77.18 Aligned_cols=111 Identities=15% Similarity=0.145 Sum_probs=77.1
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec-------------CCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT-------------RNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~-------------~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
..+..|+.+.|.|.+.+.|.| .+.|++++.... ....|.|.++...|+|.|+|.+.|..
T Consensus 110 ~~~~~g~~~~l~C~~~g~p~~--------~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~ 181 (389)
T 2jll_A 110 YYSWEGNPINISCDVKSNPPA--------SIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHI 181 (389)
T ss_dssp EEECTTCCEEEEECEEEESCC--------EEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETT
T ss_pred EEeccCCEEEEEEEEEecCCC--------eEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 456789999999999998877 699999973221 23469999999999999999999999
Q ss_pred CCcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeee----cccCC--eEEEEECCE
Q psy6361 75 GSTSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHY----GVPTP--DFSWYKDGS 128 (148)
Q Consensus 75 ~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~----g~p~~--~~~W~~~g~ 128 (148)
|.......+.+...|..... .......+..+.+.|... +.|.. .+.|.+++.
T Consensus 182 G~~~~~~~l~v~~~P~~P~~--~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~ 239 (389)
T 2jll_A 182 GTRFQEYILALADVPSSPYG--VKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVAS 239 (389)
T ss_dssp EEEEEEEEEEECCCCCCCEE--EEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTC
T ss_pred CcEEEEEEEEecCCCCCCcc--eEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCC
Confidence 88777777776544432211 011223456788888742 22322 466777654
No 319
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=3.6e-11 Score=67.62 Aligned_cols=71 Identities=11% Similarity=0.122 Sum_probs=53.3
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec-----------CCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT-----------RNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~-----------~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
....+..|+.+.|.|.+. .+.| .+.|+|++.... ....|.|.++..+|+|.|+|.+.+
T Consensus 19 ~~~~v~~G~~v~L~C~~~-~p~~--------~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~-- 87 (102)
T 2eo1_A 19 REVQAEAGASATLSCEVA-QAQT--------EVTWYKDGKKLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGG-- 87 (102)
T ss_dssp EEEEEETTCCEEECCBCS-CSSS--------CCEEEETTEECCCCSSEEEEEETTEEEEEETTCCTTTCSCEEEEETT--
T ss_pred ccEEEeCCCcEEEEEEec-CCCC--------ceEEEECCEECCCCCCEEEEEcCCEEEEEECCCCcccCEEEEEEcCC--
Confidence 456788999999999998 5655 599999972221 125799999999999999999843
Q ss_pred CCcEEEEEEEEecCC
Q psy6361 75 GSTSKTIQMNVLVPP 89 (148)
Q Consensus 75 ~~~~~~~~l~v~~~p 89 (148)
....+.|.|..+|
T Consensus 88 --~~~~~~l~V~~p~ 100 (102)
T 2eo1_A 88 --QQLSFRLQVAGQC 100 (102)
T ss_dssp --EECCEEEEEESCC
T ss_pred --CcEEEEEEEeCCC
Confidence 3445667776554
No 320
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.22 E-value=1.1e-10 Score=83.30 Aligned_cols=111 Identities=10% Similarity=0.073 Sum_probs=72.7
Q ss_pred eccceeeeeeccc-CCCCcCCCCccEEEEeeCCEE---------ecCC------ceEEEecCCCCCCEEEEEEEEeCCCC
Q psy6361 13 LDLIPMHSRYNYT-NLPQSRNPGQVIKRYLKDLLY---------VTRN------GSFVINNIAEKDTNVYTCTVSNAAGS 76 (148)
Q Consensus 13 g~~~~l~C~~~~~-~~p~~~~~~~~~v~W~~~~~~---------~~~~------~~l~i~~~~~~d~g~y~C~~~~~~~~ 76 (148)
++.+.|.|.+.+. |.|. .++|++++.. ...+ ..|.|...... .|.|+|.+.|..+.
T Consensus 150 ~~~v~L~C~~~g~~P~p~-------~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~ 221 (512)
T 1zvo_C 150 NSPVVLACLITGYHPTSV-------TVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASK 221 (512)
T ss_pred CCeEEEEEEEEeeecCce-------EEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCC
Confidence 5788999999887 4443 6999997511 1111 23677766666 89999999998876
Q ss_pred cEEEE-----------EEEEecC----------------------------------------------------CEEEe
Q psy6361 77 TSKTI-----------QMNVLVP----------------------------------------------------PFFKD 93 (148)
Q Consensus 77 ~~~~~-----------~l~v~~~----------------------------------------------------p~~~~ 93 (148)
..... .+.+..+ |.+..
T Consensus 222 ~~~~~~~~~~~~~~~~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~ 301 (512)
T 1zvo_C 222 SKKEIFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYL 301 (512)
T ss_pred ceEEEecCCCCCCcCCEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEE
Confidence 43332 2233222 33222
Q ss_pred CCCceEEEecCCcEEEEeeeecccC--CeEEEEECCEEee
Q psy6361 94 EQQESVAIVVNHPMNISCSHYGVPT--PDFSWYKDGSLLR 131 (148)
Q Consensus 94 ~~~~~~~~~~g~~~~l~C~~~g~p~--~~~~W~~~g~~l~ 131 (148)
..+....+.+|+.+.|.|.+.|..+ ..++|++||..+.
T Consensus 302 ~~p~~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~ 341 (512)
T 1zvo_C 302 LTPAVQDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPT 341 (512)
T ss_pred ECCChHHhccCCceEEEEEEeceECCCeEEEEEECCEecc
Confidence 2022234557999999999988633 3899999998865
No 321
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.22 E-value=1.6e-12 Score=75.67 Aligned_cols=74 Identities=19% Similarity=0.214 Sum_probs=58.8
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec--------------C---CceEEEecCCCCCC-EEEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT--------------R---NGSFVINNIAEKDT-NVYTC 68 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~--------------~---~~~l~i~~~~~~d~-g~y~C 68 (148)
...+..|+.+.|.|.+.+.|.|. .+.|++++.... . ...|.|.++..+|+ |.|+|
T Consensus 22 ~~~~~~G~~v~l~C~~~g~P~p~-------~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~Y~C 94 (122)
T 2cry_A 22 TQHALHGEKGQIKCFIRSTPPPD-------RIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQTIYNC 94 (122)
T ss_dssp CCCCCTTSCCCCCEEECCSSCCS-------EEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHHHHSCEEE
T ss_pred eEEEecCCCEEEEEEEeecCCCc-------EeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChhhCCceEEE
Confidence 45678899999999999999884 599999861111 1 23799999999999 99999
Q ss_pred EEEeCCCCcEEEEEEEEec
Q psy6361 69 TVSNAAGSTSKTIQMNVLV 87 (148)
Q Consensus 69 ~~~~~~~~~~~~~~l~v~~ 87 (148)
.+.|..|.....+.|.|..
T Consensus 95 ~a~N~~G~~~~~~~l~V~~ 113 (122)
T 2cry_A 95 TAWNSFGSDTEIIRLKEQG 113 (122)
T ss_dssp EEECSSCEEEEEECCCCSC
T ss_pred EEECCCCeEEEEEEEEECC
Confidence 9999999877766666653
No 322
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.22 E-value=1.2e-10 Score=67.29 Aligned_cols=80 Identities=14% Similarity=0.104 Sum_probs=57.8
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE---------------------EecCCceEEEecCCCCCCEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL---------------------YVTRNGSFVINNIAEKDTNV 65 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~---------------------~~~~~~~l~i~~~~~~d~g~ 65 (148)
...+..|+++.|.|.+.+...+ ...+.|+|++. ....+.+|.|.+++.+|+|.
T Consensus 12 ~v~~~~G~~v~L~C~~~~~~~~------~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~ 85 (117)
T 3q0h_A 12 NISAEKGGSIILQCHLSSTTAQ------VTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPGPGLGLTLQSLTVNDTGE 85 (117)
T ss_dssp CEEEETTCCEEECEEEESCCCE------EEEEEEEETTEEEEEEETTTEEECCGGGTTTEEECSTTCEEECSCCGGGCEE
T ss_pred CEEEecCCCEEEEEEecCCCCC------EEEEEEEeCCEEEEEEECCCCceeCccccCcEEeCCceEEEEeeCChhhCEE
Confidence 4688999999999999873211 12689999741 11224689999999999999
Q ss_pred EEEEEEe-CCCCcEEEEEEEEecCCEEE
Q psy6361 66 YTCTVSN-AAGSTSKTIQMNVLVPPFFK 92 (148)
Q Consensus 66 y~C~~~~-~~~~~~~~~~l~v~~~p~~~ 92 (148)
|+|.+.+ ..+.....+.|.|..+|...
T Consensus 86 Y~C~v~~~~~g~~~~~~~L~V~~pp~~~ 113 (117)
T 3q0h_A 86 YFCIYHTYPDGTYTGRIFLEVLESSVAE 113 (117)
T ss_dssp EEEEEEEETTCCEEEEEEEEEECC----
T ss_pred EEEEEEECCCCCeEEEEEEEEEccCccc
Confidence 9999754 55667778899998877654
No 323
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.21 E-value=4.2e-11 Score=67.48 Aligned_cols=73 Identities=12% Similarity=0.222 Sum_probs=54.3
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE--------EecC---CceEEEecCCCCCCEEEEEEEEeC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL--------YVTR---NGSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~--------~~~~---~~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
.....+..|+.+.|.|.+.+.+.| +.|+|++. .... ...|.|.++..+|+|.|+|.
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~p~~---------v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~---- 81 (103)
T 2e7b_A 15 LKDLEVLEGGAATLRCVLSSVAAP---------VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS---- 81 (103)
T ss_dssp CCCEEEESSSCEEEEEECSSCCCS---------CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE----
T ss_pred CccEEEECCCcEEEEEEEeCCCCC---------eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE----
Confidence 345778999999999999887665 78999861 1111 23599999999999999998
Q ss_pred CCCcEEEEEEEEecCCE
Q psy6361 74 AGSTSKTIQMNVLVPPF 90 (148)
Q Consensus 74 ~~~~~~~~~l~v~~~p~ 90 (148)
.+.....+.|.|..+|.
T Consensus 82 ~g~~~~~~~l~V~~~p~ 98 (103)
T 2e7b_A 82 FGDQTTSATLTVTALPS 98 (103)
T ss_dssp CSSCBCCBCEEEECCCC
T ss_pred ECCcEEEEEEEEEeccc
Confidence 44455556677776553
No 324
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.21 E-value=1.3e-10 Score=74.73 Aligned_cols=117 Identities=10% Similarity=0.114 Sum_probs=73.3
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EE-----------------e-----cCCceEEEecC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LY-----------------V-----TRNGSFVINNI 58 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~-----------------~-----~~~~~l~i~~~ 58 (148)
....+..|+.+.|.|.+.+.+.. ...+.||+.. .. . .....|.|.++
T Consensus 9 ~~v~v~~G~~vtL~C~~s~~~~~------~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 82 (229)
T 1hxm_A 9 QTVPVSIGVPATLRCSMKGEAIG------NYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAP 82 (229)
T ss_dssp SEEEEETTCCEEEEEEECSSCGG------GSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSC
T ss_pred CEEEEcCCCCEEEEeEecCCccC------cceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcC
Confidence 45678999999999999854321 0169998852 00 0 11237999999
Q ss_pred CCCCCEEEEEEEEeCC------CC--cEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecc-cCC-eEEEEECCE
Q psy6361 59 AEKDTNVYTCTVSNAA------GS--TSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGV-PTP-DFSWYKDGS 128 (148)
Q Consensus 59 ~~~d~g~y~C~~~~~~------~~--~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~-~~~W~~~g~ 128 (148)
+.+|+|.|.|.+.+.. .. ......|.|........ ++...+.. ..+.|.|.+.|. |.+ .+.|+++ .
T Consensus 83 ~~~Dsg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~--~P~v~~~~-~~~~L~C~~~g~~P~~i~v~W~~~-~ 158 (229)
T 1hxm_A 83 SERDEGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQPHT--KPSVFVMK-NGTNVACLVKEFYPKDIRINLVSS-K 158 (229)
T ss_dssp CGGGCEEEEEEEECCCCSSSCCCCCEEBCCEEEEEECCSCCCB--CCEEEEEE-ETTEEEEEEESCBSSCCEEEEECS-S
T ss_pred CHhHCeEEEEEEecCCCcccccchhhcCccEEEEEeccCCCCc--CCcEEEcC-CCCeEEEEEEEEeCCCEEEEEecC-C
Confidence 9999999999998753 11 12234666653111111 11222222 235899999875 544 8999999 6
Q ss_pred Eeec
Q psy6361 129 LLRI 132 (148)
Q Consensus 129 ~l~~ 132 (148)
.+..
T Consensus 159 ~~~~ 162 (229)
T 1hxm_A 159 KITE 162 (229)
T ss_dssp EEEE
T ss_pred EEec
Confidence 6643
No 325
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.21 E-value=7.5e-11 Score=66.02 Aligned_cols=74 Identities=15% Similarity=0.188 Sum_probs=55.3
Q ss_pred ceeeeEeeeccceeeeeecc-cCCCCcCCCCccEEEEeeCC----EE-----------ecC----CceEEEecCCCCCCE
Q psy6361 5 MNVEQAMLLDLIPMHSRYNY-TNLPQSRNPGQVIKRYLKDL----LY-----------VTR----NGSFVINNIAEKDTN 64 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~-~~~p~~~~~~~~~v~W~~~~----~~-----------~~~----~~~l~i~~~~~~d~g 64 (148)
.....+..|+.+.|+|.+.+ .+.| .|+|.|.+ .. ... ...|+|..+...|+|
T Consensus 21 ~S~~tv~~G~~~~LeCpv~yc~~rP--------nVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~s~fiL~f~~V~~sDsG 92 (122)
T 1xau_A 21 NSKHSAWTGELFKIECPVKYCVHRP--------NVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNG 92 (122)
T ss_dssp TEEEEECTTSCEEEEEEEECSSSCC--------CEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEEEETTCCGGGCE
T ss_pred eccEEEecCCeEEEEeEecCCCCCC--------cEEEEecCCeeccccccceeeecceeccCCceeEEEEEeeEEEcCCc
Confidence 34567899999999999977 4677 59999964 11 111 237999999999999
Q ss_pred EEEEEEEeCCCC-cEEEEEEEEe
Q psy6361 65 VYTCTVSNAAGS-TSKTIQMNVL 86 (148)
Q Consensus 65 ~y~C~~~~~~~~-~~~~~~l~v~ 86 (148)
.|.|.|.+..+. .+....+.|.
T Consensus 93 ~YrCsAn~~~g~ieSHs~ti~V~ 115 (122)
T 1xau_A 93 SYSCSTNFNSQVINSHSVTIHVR 115 (122)
T ss_dssp EEEEEEEETTEEEECCCEEEEEC
T ss_pred cEEEEeeCCCCceeeeEEEEEEE
Confidence 999999998776 3444444443
No 326
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.21 E-value=2.3e-11 Score=76.62 Aligned_cols=72 Identities=17% Similarity=0.204 Sum_probs=57.9
Q ss_pred eEeeeccceeeeee-cccCCCCcCCCCccEEEEeeCC---------EEecCCceEEEecCCCCCCEEEEEEEEeCCCCcE
Q psy6361 9 QAMLLDLIPMHSRY-NYTNLPQSRNPGQVIKRYLKDL---------LYVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTS 78 (148)
Q Consensus 9 ~~~~g~~~~l~C~~-~~~~~p~~~~~~~~~v~W~~~~---------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 78 (148)
.+..|+.+.|.|.+ .+.|.| .+.|++++ ........|.|.++..+|+|.|+|.+.|..+...
T Consensus 132 ~~~~g~~v~l~C~~~~g~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~ 203 (214)
T 3jz7_A 132 SEEIGNDFKLKCEPKEGSLPL--------QFEWQKLSDSQTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQ 203 (214)
T ss_dssp CCBTTCCEEEEEECSBCCSSC--------EEEEEECSTTCCCCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEE
T ss_pred ceecCCcEEEEecCCCCCCCC--------EEEEEECCCCCccCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEE
Confidence 36678999999999 677777 69999953 1122456899999999999999999999998877
Q ss_pred EEEEEEEecC
Q psy6361 79 KTIQMNVLVP 88 (148)
Q Consensus 79 ~~~~l~v~~~ 88 (148)
..+.|.|..+
T Consensus 204 ~~~~l~V~~P 213 (214)
T 3jz7_A 204 CMLRLDVVPP 213 (214)
T ss_dssp EEEEECCBCC
T ss_pred EEEEEEEeCC
Confidence 7777776543
No 327
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.20 E-value=1.1e-10 Score=67.04 Aligned_cols=78 Identities=21% Similarity=0.221 Sum_probs=55.5
Q ss_pred eeEeeeccceeeeeeccc-CCCCcCCCCccEEEEeeCC---------------------EEecC--------CceEEEec
Q psy6361 8 EQAMLLDLIPMHSRYNYT-NLPQSRNPGQVIKRYLKDL---------------------LYVTR--------NGSFVINN 57 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~-~~p~~~~~~~~~v~W~~~~---------------------~~~~~--------~~~l~i~~ 57 (148)
..+..|+.+.|.|.+... +.+. ....+.|+|++ ..... ..+|.|.+
T Consensus 10 v~~~~G~~v~L~C~~~~~~~~~~----~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~ 85 (118)
T 3udw_C 10 VPGFLGDSVTLPCYLQVPNMEVT----HVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFG 85 (118)
T ss_dssp EEEETTSCEEECCEEECCTTCCC----EEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECS
T ss_pred EEEeeCCcEEEEEEeECCCCCCC----ceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEee
Confidence 778999999999999543 2221 01148999973 00111 56899999
Q ss_pred CCCCCCEEEEEEEEe-CCCCcEEEEEEEEecCC
Q psy6361 58 IAEKDTNVYTCTVSN-AAGSTSKTIQMNVLVPP 89 (148)
Q Consensus 58 ~~~~d~g~y~C~~~~-~~~~~~~~~~l~v~~~p 89 (148)
++.+|+|.|+|.+.+ ..+.....+.|.|..+|
T Consensus 86 v~~~D~G~Y~C~v~~~~~~~~~~~~~L~V~~~P 118 (118)
T 3udw_C 86 LRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKP 118 (118)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEC--
T ss_pred cChHHCeEEEEEEEECCCCCccceEEEEEEeCC
Confidence 999999999999988 66666777788877654
No 328
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=9.8e-11 Score=65.94 Aligned_cols=73 Identities=16% Similarity=0.152 Sum_probs=54.6
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE--------Eec---CCceEEEecCCCCCCEEEEEEEEeC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL--------YVT---RNGSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~--------~~~---~~~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
.....+..|+.+.|.|.+ +.+.| .+.|+|++. ... ....|.|.++..+|+|.|+|.
T Consensus 15 ~~~~~v~~G~~v~l~C~~-~~p~~--------~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~---- 81 (103)
T 2dku_A 15 LTNLQVEEKGTAVFTCKT-EHPAA--------TVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD---- 81 (103)
T ss_dssp CCCEEEETTSEEEEEEEC-SSCCS--------CCEEEESSCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE----
T ss_pred CCcEEEeCCCcEEEEEEe-CCCCC--------eEEEEeCCEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE----
Confidence 356788999999999994 66666 599999871 111 123799999999999999998
Q ss_pred CCCcEEEEEEEEecCCE
Q psy6361 74 AGSTSKTIQMNVLVPPF 90 (148)
Q Consensus 74 ~~~~~~~~~l~v~~~p~ 90 (148)
.+.....+.|.|...|.
T Consensus 82 ~g~~~~~~~l~V~~~p~ 98 (103)
T 2dku_A 82 IGQAQSRAQLLVQGRRS 98 (103)
T ss_dssp CSSCBCCEEEEEECSCC
T ss_pred eCCceEEEEEEEeCccC
Confidence 55555567788775543
No 329
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.20 E-value=9e-11 Score=82.80 Aligned_cols=73 Identities=18% Similarity=0.202 Sum_probs=61.1
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE-----------EecCCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL-----------YVTRNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~-----------~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
....+..|+.+.|.|.+.+.|.| .+.|++++. ....+..|.|.+++.+|+|.|+|.|.|..
T Consensus 393 ~~~~v~~G~~v~l~C~~~g~P~p--------~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 464 (477)
T 2id5_A 393 QQVFVDEGHTVQFVCRADGDPPP--------AILWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAG 464 (477)
T ss_dssp EEEEEETTCCEEECCCEEEESCC--------EEEEECTTSCBC-------CEECTTSCEEESSCCSTTCEEEEEEEEETT
T ss_pred ccEEEeCCCeEEEEEeccccCCC--------EEEEEECCccccccCCCceEEeCCCCEEEEeeCChHHCEEEEEEEEeCC
Confidence 45678899999999999999988 699999861 12335679999999999999999999999
Q ss_pred CCcEEEEEEEEe
Q psy6361 75 GSTSKTIQMNVL 86 (148)
Q Consensus 75 ~~~~~~~~l~v~ 86 (148)
|..+..+.+.|.
T Consensus 465 g~~~~~~~l~V~ 476 (477)
T 2id5_A 465 GNDSMPAHLHVR 476 (477)
T ss_dssp EEEEEEEEEEEE
T ss_pred CcEEEEEEEEEe
Confidence 887777777663
No 330
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.20 E-value=7e-11 Score=73.69 Aligned_cols=73 Identities=19% Similarity=0.304 Sum_probs=58.9
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe-----------cCCceEEEec-CCCCCCEEEEEEEEeC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV-----------TRNGSFVINN-IAEKDTNVYTCTVSNA 73 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~-----------~~~~~l~i~~-~~~~d~g~y~C~~~~~ 73 (148)
....+..|+.+.|.|.+.+.|.| .+.|++++... .....|.|.+ +..+|+|.|+|.+.|.
T Consensus 112 ~~~~~~~g~~~~l~C~~~g~p~p--------~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~ 183 (197)
T 2j8h_A 112 GAVHALRGEVVSIKIPFSGKPDP--------VITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNR 183 (197)
T ss_dssp EEEEEETTCCCEEEEEEEEESCC--------EEEEEESSCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEET
T ss_pred CeEEEeCCCEEEEEEEEEecCCC--------cEEEEECCEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeC
Confidence 34567789999999999998887 69999987222 1235788889 9999999999999999
Q ss_pred CCCcEEEEEEEEe
Q psy6361 74 AGSTSKTIQMNVL 86 (148)
Q Consensus 74 ~~~~~~~~~l~v~ 86 (148)
.+..+..+.|.|.
T Consensus 184 ~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 184 FGIDQKTVELDVA 196 (197)
T ss_dssp TEEEEEEEEEEEE
T ss_pred CCcEeEEEEEEEe
Confidence 9887777777663
No 331
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.19 E-value=6.4e-11 Score=72.85 Aligned_cols=72 Identities=19% Similarity=0.209 Sum_probs=55.9
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE---EecCCceEEEecCCCCCCEEEEEEEEeCCCC-cEEEEEE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL---YVTRNGSFVINNIAEKDTNVYTCTVSNAAGS-TSKTIQM 83 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~---~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~-~~~~~~l 83 (148)
..+..|+.+.|.|.+.+.+.+. .+.|+|++. .......|.|.++..+|+|.|+|.+.|..+. .+..+.|
T Consensus 98 ~~~~~g~~~~l~C~~~~~~~~~-------~~~W~k~g~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l 170 (175)
T 1fnl_A 98 WVFKEEDPIHLRCHSWKNTALH-------KVTYLQNGKDRKYFHHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNI 170 (175)
T ss_dssp SEEETTCCEEEEEEECTTCCCE-------EEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEE
T ss_pred ceecCCCCEEEEEEcCCCCCce-------EEEEEECCeEccCCCCCCEEEEcccChhhCeEEEEEEEcCCCCccCccEEE
Confidence 4567899999999998776543 699999983 2335788999999999999999999997553 4445555
Q ss_pred EEe
Q psy6361 84 NVL 86 (148)
Q Consensus 84 ~v~ 86 (148)
.|.
T Consensus 171 ~V~ 173 (175)
T 1fnl_A 171 TIT 173 (175)
T ss_dssp EEE
T ss_pred EEe
Confidence 554
No 332
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.19 E-value=1.6e-10 Score=71.70 Aligned_cols=66 Identities=17% Similarity=0.148 Sum_probs=53.7
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE----------EecCCceEEEecCCCCCCEEEEEEEEeCCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL----------YVTRNGSFVINNIAEKDTNVYTCTVSNAAGS 76 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~----------~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 76 (148)
...+..|+.+.|.|.+.+.|.| .+.|++++. ....+..|.|.++..+|+|.|+|.+.|..+.
T Consensus 105 ~~~~~~g~~~~l~C~~~g~p~p--------~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~ 176 (189)
T 2v44_A 105 PQEFKQGEDAEVVCRVSSSPAP--------AVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARG 176 (189)
T ss_dssp SEEEETTSCEEECCEEECSSCC--------EEEEEEEC--CEECCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTT
T ss_pred cEEEeCCCCEEEEEEECcCCCC--------cEEEEECCcEEeccCCCCEEEecCCcEEEEEcCcccCeEEEEEEEccccC
Confidence 3467889999999999988887 699999871 2334568999999999999999999999866
Q ss_pred cEEE
Q psy6361 77 TSKT 80 (148)
Q Consensus 77 ~~~~ 80 (148)
....
T Consensus 177 ~~~~ 180 (189)
T 2v44_A 177 EIDF 180 (189)
T ss_dssp EEEE
T ss_pred ceee
Confidence 4433
No 333
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.19 E-value=5.5e-11 Score=75.20 Aligned_cols=73 Identities=21% Similarity=0.280 Sum_probs=58.3
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe--------cCCceEEEecCCCCCCEEEEEEEEeCCCCcEE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV--------TRNGSFVINNIAEKDTNVYTCTVSNAAGSTSK 79 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~--------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 79 (148)
..+..|+.+.|.|.+.+.+.| .+.|++++... .....|.|.++..+|+|.|+|.+.|..|....
T Consensus 120 ~~~~~g~~v~l~C~~~g~p~p--------~i~W~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s 191 (212)
T 2yd1_A 120 RVIEVGHTVLMTCKAIGNPTP--------NIYWIKNQTKVDMSNPRYSLKDGFLQIENSREEDQGKYECVAENSMGTEHS 191 (212)
T ss_dssp EEEETTCCEEECCEEECSSCC--------EEEEEETTEECCTTSTTEEEETTEEEECSCCGGGCEEEEEEEEETTEEEEC
T ss_pred eEeecCCeEEEEEEeccCCCC--------eEEEEECCeEcccCCCeEEccCCeEEEccCChhhCEEEEEEeecCCCceeE
Confidence 456779999999999988887 69999997322 22458999999999999999999999987544
Q ss_pred -EEEEEEecC
Q psy6361 80 -TIQMNVLVP 88 (148)
Q Consensus 80 -~~~l~v~~~ 88 (148)
.+.|.|...
T Consensus 192 ~~~~l~V~~~ 201 (212)
T 2yd1_A 192 KATNLYVKVR 201 (212)
T ss_dssp CCEEEEEEC-
T ss_pred EEEEEEEEec
Confidence 367777643
No 334
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.18 E-value=1.2e-10 Score=66.15 Aligned_cols=71 Identities=11% Similarity=0.165 Sum_probs=52.9
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE-----------ecCCceEEEecCCCCCCEEEEEEEEeC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY-----------VTRNGSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~-----------~~~~~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
.....+..|+.+.|.|.+.+. | .+.|+|++.. ......|.|.++..+|+|.|+|.+.
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~--p--------~v~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~-- 82 (108)
T 2dm7_A 15 LKTKEASEGATATLQCELSKV--A--------PVEWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCG-- 82 (108)
T ss_dssp CBCCEEETTSCEEEEEEBSSS--C--------CCEEESSSSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEEET--
T ss_pred CCcEEEeCCCcEEEEEEeCCC--C--------eeEEEECCEECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEEEc--
Confidence 345678899999999998764 4 4899998611 1122359999999999999999983
Q ss_pred CCCcEEEEEEEEecCC
Q psy6361 74 AGSTSKTIQMNVLVPP 89 (148)
Q Consensus 74 ~~~~~~~~~l~v~~~p 89 (148)
.......|.|..+|
T Consensus 83 --n~~~~~~l~V~~~p 96 (108)
T 2dm7_A 83 --QERTSATLTVRALP 96 (108)
T ss_dssp --TEEEEEECEEECCC
T ss_pred --CCEEEEEEEEecCC
Confidence 34566777777544
No 335
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.18 E-value=5.1e-11 Score=75.29 Aligned_cols=75 Identities=20% Similarity=0.181 Sum_probs=56.7
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE---EecCCceEEEecCCCCCCEEEEEEEEeCCC-CcEEEEEE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL---YVTRNGSFVINNIAEKDTNVYTCTVSNAAG-STSKTIQM 83 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~---~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~-~~~~~~~l 83 (148)
..+..|+.+.|.|.+.+.+++. .+.|+|++. .......|.|.++..+|+|.|+|.+.|..+ ..+..+.|
T Consensus 98 ~~v~~G~~v~L~C~~~~~~p~~-------~v~W~k~g~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l 170 (204)
T 3sgj_C 98 WVFKEEDPIHLRCHSWKNTALH-------KVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQI 170 (204)
T ss_dssp SEEETTCCEEEEEEEGGGCCCE-------EEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEE
T ss_pred eeEeCCCcEEEEEEecCCCCCc-------eEEEEECCcEeecccCCceEEECcCCcccCEEEEEEEEeCCCceecCcEEE
Confidence 4567899999999997664432 799999983 334567899999999999999999999543 35556677
Q ss_pred EEecCC
Q psy6361 84 NVLVPP 89 (148)
Q Consensus 84 ~v~~~p 89 (148)
.|..+|
T Consensus 171 ~V~~~~ 176 (204)
T 3sgj_C 171 TITQGL 176 (204)
T ss_dssp EEEC--
T ss_pred EEeCcC
Confidence 776443
No 336
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.18 E-value=9.5e-11 Score=72.87 Aligned_cols=70 Identities=16% Similarity=0.240 Sum_probs=56.7
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec-----------CCceEEEecCCCCCCEEEEEEEEeCCCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT-----------RNGSFVINNIAEKDTNVYTCTVSNAAGS 76 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~-----------~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 76 (148)
..+..|+.+.|.|.+.+.|.| .+.|++++.... ....|.|.++..+|+|.|+|.+.|..+.
T Consensus 113 ~~~~~g~~~~l~C~~~g~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 184 (194)
T 2a38_A 113 MTVRQGSQVRLQVRVTGIPTP--------VVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGR 184 (194)
T ss_dssp EEECTTEEEEEEEEEEEESCC--------EEEEEETTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEE
T ss_pred EEEcCCCEEEEEEEEEEecCC--------eEEEEECCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCc
Confidence 457788999999999988887 699999972221 1126999999999999999999999988
Q ss_pred cEEEEEEEE
Q psy6361 77 TSKTIQMNV 85 (148)
Q Consensus 77 ~~~~~~l~v 85 (148)
....+.|.|
T Consensus 185 ~~~~~~l~V 193 (194)
T 2a38_A 185 ATSTAELLV 193 (194)
T ss_dssp EEEEEEEEE
T ss_pred eEEEEEEEE
Confidence 777766665
No 337
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.18 E-value=3.7e-10 Score=64.63 Aligned_cols=72 Identities=19% Similarity=0.081 Sum_probs=54.8
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC---------------------------EEecCCceEEEecCCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL---------------------------LYVTRNGSFVINNIAE 60 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~---------------------------~~~~~~~~l~i~~~~~ 60 (148)
..+..|+++.|.|.....+.+ .+.|+|.. .....+.+|.|.+++.
T Consensus 10 ~~~~~G~~v~L~~~~~p~~~~--------~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ngSL~I~nvt~ 81 (111)
T 2qsq_A 10 FNVAEGKEVLLLVHNLPQHLF--------GYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQ 81 (111)
T ss_dssp SEEETTSCEEEEEESCCSSEE--------EEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTSCEEECSCCG
T ss_pred ceeccCCCEEEEEeCCCCCce--------EEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecCCcEEEccCcc
Confidence 578899999999986443332 69999963 1223467899999999
Q ss_pred CCCEEEEEEEEeCCCC-cEEEEEEEEec
Q psy6361 61 KDTNVYTCTVSNAAGS-TSKTIQMNVLV 87 (148)
Q Consensus 61 ~d~g~y~C~~~~~~~~-~~~~~~l~v~~ 87 (148)
+|+|.|+|.+.+..+. ....+.|.|..
T Consensus 82 ~D~G~Ytc~v~~~~~~~~~~~~~L~V~~ 109 (111)
T 2qsq_A 82 NDAGFYTLHVIKSDLVNEEATGQFRVYP 109 (111)
T ss_dssp GGCEEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred cCCeEEEEEEEeCCCcEEEEEEEEEEec
Confidence 9999999999988663 56667777653
No 338
>3rgv_A YAE62 TCR A chain; TCR, MHC, MHC class I, immune system; 2.90A {Mus musculus} PDB: 3c60_A
Probab=99.17 E-value=6.8e-11 Score=74.45 Aligned_cols=116 Identities=14% Similarity=0.143 Sum_probs=75.4
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC---------------------EE------ecCCceEEEec
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL---------------------LY------VTRNGSFVINN 57 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~---------------------~~------~~~~~~l~i~~ 57 (148)
.....+..|+.+.|.|.+.+.... .+.||+.. +. ......|.|.+
T Consensus 7 p~~v~v~~G~svtL~C~~s~~~~~--------~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~ 78 (200)
T 3rgv_A 7 QGQVTLSENDFLFINCTYSTTGYP--------TLFWYVQYSGEGPQLLLQVTTANNKGSSRGFEATYDKGTTSFHLQKTS 78 (200)
T ss_dssp CSEEEEETTCCEEECCEEECSSCC--------EEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESS
T ss_pred CCEEEEeCCCCEEEEEEecCCCCc--------EEEEEEeCCCCCcEEEEEecCCCCcccCCceEEEECCCCCEEEEEEcC
Confidence 345678899999999999876433 58999852 00 01235799999
Q ss_pred CCCCCCEEEEEEEEeCCC-CcEEEEEEEEecC-----CEEEeCCCceEEEecCCcEEEEeeeecc-cCCeEEEEECCEEe
Q psy6361 58 IAEKDTNVYTCTVSNAAG-STSKTIQMNVLVP-----PFFKDEQQESVAIVVNHPMNISCSHYGV-PTPDFSWYKDGSLL 130 (148)
Q Consensus 58 ~~~~d~g~y~C~~~~~~~-~~~~~~~l~v~~~-----p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~~~~W~~~g~~l 130 (148)
++.+|+|.|.|.+..... .......|.|... |.+-.. ......+.+.|.+.+. |...+.|+++|..+
T Consensus 79 l~~~DsG~Y~Ca~~~~~~~~fG~GT~L~V~~~~~~~~P~V~~~------~~~~~~~tl~Cl~~gf~P~i~v~~~~~g~~~ 152 (200)
T 3rgv_A 79 VQEIDSAVYYCAANSGTYQRFGTGTKLQVVPNIQNPDPAVYQL------RDSKSSDKSVCLFTDFDSQTNVSQSKDSDVY 152 (200)
T ss_dssp CCSTTCEEEEEEEESSSCCCCCCCEEEEEECCCSSCCCEEEEE------EESSSSSCEEEEEESCCTTCCCCCCSSTTCE
T ss_pred CcCccCCCEEEEeccCcccccCcCEEEEEeCCCCCCCCeEEEc------cCCCCCceEEEEcccccCCeEeEeccCCcEE
Confidence 999999999999864211 1223345666532 222211 0112346789998775 54578899999887
Q ss_pred ecCC
Q psy6361 131 RIQS 134 (148)
Q Consensus 131 ~~~~ 134 (148)
....
T Consensus 153 ~~~~ 156 (200)
T 3rgv_A 153 ITDK 156 (200)
T ss_dssp ECCC
T ss_pred eecc
Confidence 6543
No 339
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.17 E-value=6.6e-11 Score=80.36 Aligned_cols=74 Identities=19% Similarity=0.222 Sum_probs=59.8
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec------------------CCceEEEecCCCCCCEEEEEE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT------------------RNGSFVINNIAEKDTNVYTCT 69 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~------------------~~~~l~i~~~~~~d~g~y~C~ 69 (148)
..+..|+.+.|.|.+.+.|.| .+.|++++.... ....|.|.+++.+|+|.|+|.
T Consensus 256 ~~~~~g~~v~l~C~~~g~P~p--------~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~ 327 (347)
T 2ifg_A 256 HTAVEMHHWCIPFSVDGQPAP--------SLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLL 327 (347)
T ss_dssp CCCEESSSEEEEEEEEEESCC--------EEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEE
T ss_pred ccCccCceEEEEEEeeecCCC--------cEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEE
Confidence 345678999999999999888 699999972221 134599999999999999999
Q ss_pred EEeCCCCcEEEEEEEEecCC
Q psy6361 70 VSNAAGSTSKTIQMNVLVPP 89 (148)
Q Consensus 70 ~~~~~~~~~~~~~l~v~~~p 89 (148)
|.|..|..+..+.|.|..+|
T Consensus 328 a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 328 AANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp EEETTEEEEEEEEECSCCCC
T ss_pred EecCCCceeeEEEEEecCCC
Confidence 99999988877777776554
No 340
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.16 E-value=3.8e-10 Score=70.07 Aligned_cols=72 Identities=19% Similarity=0.170 Sum_probs=57.2
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEee--CCEEec--------------CCceEEEecCC-CCCCEEEEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLK--DLLYVT--------------RNGSFVINNIA-EKDTNVYTCT 69 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~--~~~~~~--------------~~~~l~i~~~~-~~d~g~y~C~ 69 (148)
...+..|+.+.|.|.+.+.|.| .+.|++ ++.... ....|.|.++. .+|+|.|+|.
T Consensus 101 ~~~~~~g~~v~l~C~~~g~p~p--------~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~ 172 (190)
T 2wv3_A 101 SENKNEGQDAMMYCKSVGYPHP--------EWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECN 172 (190)
T ss_dssp EEEEETTSCEEEEEEEECSSCC--------EEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEE
T ss_pred cceeeCCCcEEEEEEeCccCCC--------ceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEE
Confidence 3467889999999999988887 699999 542111 11369999999 7999999999
Q ss_pred EEeCCCCcEEEEEEEEe
Q psy6361 70 VSNAAGSTSKTIQMNVL 86 (148)
Q Consensus 70 ~~~~~~~~~~~~~l~v~ 86 (148)
+.|..+.....+.|.|.
T Consensus 173 a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 173 ATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EECSSCEEEEEEEEEEE
T ss_pred EEecCCcceeEEEEEEE
Confidence 99999987777777664
No 341
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.16 E-value=5.6e-11 Score=73.15 Aligned_cols=75 Identities=20% Similarity=0.147 Sum_probs=58.0
Q ss_pred eeEeeeccceeeeeecc-cCCCCcCCCCccEEEEeeCCEEe---cCCceEEEecCCCCCCEEEEEEEEeCCCC-cEEEEE
Q psy6361 8 EQAMLLDLIPMHSRYNY-TNLPQSRNPGQVIKRYLKDLLYV---TRNGSFVINNIAEKDTNVYTCTVSNAAGS-TSKTIQ 82 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~-~~~p~~~~~~~~~v~W~~~~~~~---~~~~~l~i~~~~~~d~g~y~C~~~~~~~~-~~~~~~ 82 (148)
..+..|+.+.|.|.+.+ .+.| .+.|++++... .....|.|.++..+|+|.|+|.+.|..+. .+..+.
T Consensus 95 ~~~~~g~~~~l~C~~~~~~p~~--------~~~W~~~g~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~ 166 (176)
T 1f2q_A 95 EVVMEGQPLFLRCHGWRNWDVY--------KVIYYKDGEALKYWYENHNISITNATVEDSGTYYCTGKVWQLDYESEPLN 166 (176)
T ss_dssp SEEETTSCEEEEEEEGGGCCEE--------EEEEEETTEECCSCCCSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEE
T ss_pred ceeeCCCCEEEEEEecCCCCce--------EEEEEECCEEEeeecCCCeEEECCCCcccCEEEEEEEEeCCcceEecCEE
Confidence 45678999999999954 4444 69999998433 34678999999999999999999996443 445567
Q ss_pred EEEecCCE
Q psy6361 83 MNVLVPPF 90 (148)
Q Consensus 83 l~v~~~p~ 90 (148)
|.|..+|.
T Consensus 167 l~V~~~p~ 174 (176)
T 1f2q_A 167 ITVIKAPR 174 (176)
T ss_dssp EEEECSCC
T ss_pred EEEecCCC
Confidence 77776654
No 342
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.16 E-value=6.8e-11 Score=74.36 Aligned_cols=73 Identities=21% Similarity=0.343 Sum_probs=55.0
Q ss_pred EeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE---------ecCCceEEEecCCCCCCEEEEEEEEeCCCC-cEE
Q psy6361 10 AMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY---------VTRNGSFVINNIAEKDTNVYTCTVSNAAGS-TSK 79 (148)
Q Consensus 10 ~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~---------~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~-~~~ 79 (148)
+..|+.+.|.|.+.+.+ | .+.|++++.. ...+..|.|.++..+|+|.|+|.+.|..+. .+.
T Consensus 122 ~~~g~~v~l~C~~~~~p-p--------~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~ 192 (208)
T 3r4d_A 122 VKELDSVTLTCLSNDIG-A--------NIQWLFNSQSLQLTERMTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSN 192 (208)
T ss_dssp CCTTCCEEEEEECSCTT-C--------EEEEEETTEECCCCSSEEEETTTTEEEESSCCGGGCEEEEEEEECTTCCEECC
T ss_pred EeeCCCEEEEEECCCCC-C--------ceEEEECCEeCCCCCCeEEcCCCCEEEEeccCHHhCeEEEEEEecCCCcccCC
Confidence 66789999999998855 5 6999998722 234478999999999999999999999987 455
Q ss_pred EEEEEEecCCEE
Q psy6361 80 TIQMNVLVPPFF 91 (148)
Q Consensus 80 ~~~l~v~~~p~~ 91 (148)
.+.|.|..+|.+
T Consensus 193 ~~~l~v~~~~~~ 204 (208)
T 3r4d_A 193 SIKLDIIFDPHH 204 (208)
T ss_dssp CEEECCC-----
T ss_pred ceeeeEEeCCcc
Confidence 666666655544
No 343
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.15 E-value=3.2e-11 Score=71.49 Aligned_cols=64 Identities=17% Similarity=0.229 Sum_probs=52.4
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe------------------------cCCceEEEecCCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV------------------------TRNGSFVINNIAEK 61 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~------------------------~~~~~l~i~~~~~~ 61 (148)
....+..|+.+.|.|.+.+.|.| .+.|++++... .....|.|.++..+
T Consensus 29 ~~~~v~~G~~v~L~C~~~g~P~p--------~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 100 (137)
T 3qr2_A 29 LSQQRWVGGSVELHCEAVGSPVP--------EIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEE 100 (137)
T ss_dssp CCEEEETTSCEEEEEEEECSSCC--------EEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCCGG
T ss_pred CCEEEeCCCCEEEEEEEeeecCC--------eEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCCcc
Confidence 35678899999999999999888 69999964100 12458999999999
Q ss_pred CCEEEEEEEEeCCCCc
Q psy6361 62 DTNVYTCTVSNAAGST 77 (148)
Q Consensus 62 d~g~y~C~~~~~~~~~ 77 (148)
|+|.|+|.+.|..|..
T Consensus 101 D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 101 DTGTYECRASNDPDRN 116 (137)
T ss_dssp GCEEEEEEEECCTTSS
T ss_pred cCEEEEEEEEecCCcc
Confidence 9999999999988764
No 344
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.15 E-value=2.1e-10 Score=64.94 Aligned_cols=55 Identities=16% Similarity=0.180 Sum_probs=44.2
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec------------CCceEEEecCCCCCCEEEEEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT------------RNGSFVINNIAEKDTNVYTCTV 70 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~------------~~~~l~i~~~~~~d~g~y~C~~ 70 (148)
...+..|+.+.|.|.+ +.+.| .+.|+|++.... ....|.|.++..+|+|.|+|.+
T Consensus 25 ~~~v~~G~~v~L~C~~-~~p~~--------~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 91 (104)
T 1pd6_A 25 AYQVSKGHKIRLTVEL-ADHDA--------EVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVV 91 (104)
T ss_dssp EEEEETTSCEEEEEEC-SSSSS--------CCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEE
T ss_pred cEEEecCCCEEEEEEE-cCCCC--------EEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEE
Confidence 3678999999999999 56666 599999972211 1128999999999999999998
No 345
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.15 E-value=2.9e-11 Score=65.23 Aligned_cols=59 Identities=8% Similarity=0.219 Sum_probs=47.9
Q ss_pred cceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec--CCceEEEecC-CCCCCEEEEEEEEe
Q psy6361 4 TMNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT--RNGSFVINNI-AEKDTNVYTCTVSN 72 (148)
Q Consensus 4 ~~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~--~~~~l~i~~~-~~~d~g~y~C~~~~ 72 (148)
......+..|+.+.|.|.+.+.| + ++|+|++.... .+..|.|.++ ..+|+|.|+|.+.+
T Consensus 5 ~p~~~v~~~G~~v~L~C~~~g~P-~---------i~W~kdg~~l~~~~~~~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 5 NIEYKVSISGTSVELTCPLDSDE-N---------LKWEKNGQELPQKHDKHLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp CCCCEEEEETTEEEEECSSCCCS-S---------CEEEETTEECTTCCSSCCBCCSCCTTTTCSCEEEECSS
T ss_pred CCceeEEEcCCeEEEEEECCCCC-c---------EEEEECCEECcCCCCCEEEECccCccCcCEEEEEEEcc
Confidence 34457788999999999998876 2 78999985443 4678999996 78999999999865
No 346
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.15 E-value=1.8e-10 Score=73.40 Aligned_cols=78 Identities=17% Similarity=0.226 Sum_probs=61.8
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEee----CCE------------------EecCCceEEEecCCCCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLK----DLL------------------YVTRNGSFVINNIAEKDT 63 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~----~~~------------------~~~~~~~l~i~~~~~~d~ 63 (148)
....+..|+.+.|.|.+.+.+.| .+.|++ ++. .......|.|.++..+|+
T Consensus 126 ~~~~~~~g~~~~l~C~~~~~p~p--------~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 197 (231)
T 3ojm_B 126 ANASTVVGGDVEFVCKVYSDAQP--------HIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADA 197 (231)
T ss_dssp CCEEEETTCCEEEECCEECSSCC--------EEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGC
T ss_pred CceEEEeCCcEEEEEEEecCCCC--------EEEEEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHC
Confidence 34567889999999999998877 699999 431 011235699999999999
Q ss_pred EEEEEEEEeCCCCcEEEEEEEEecCCEE
Q psy6361 64 NVYTCTVSNAAGSTSKTIQMNVLVPPFF 91 (148)
Q Consensus 64 g~y~C~~~~~~~~~~~~~~l~v~~~p~~ 91 (148)
|.|+|.+.|..+.....+.|.|..+|..
T Consensus 198 G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 225 (231)
T 3ojm_B 198 GEYICKVSNYIGQANQSAWLTVLPKQQA 225 (231)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEECCC--
T ss_pred eEEEEEEEeccceEeeEEEEEEecCCCC
Confidence 9999999999998888888888866654
No 347
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.14 E-value=2.8e-10 Score=79.69 Aligned_cols=76 Identities=24% Similarity=0.313 Sum_probs=58.8
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC------------EEecCCceEEEecCCCCCCEEEEEEEEeC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL------------LYVTRNGSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~------------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
....+..|+.+.|.|.+ +.+.| .+.|++++ .....+.+|.|.+++.+|+|.|+|.|.|.
T Consensus 349 ~~~~v~~G~~v~L~C~~-~~p~p--------~i~W~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 419 (440)
T 3zyj_A 349 ADLNVTEGMAAELKCRA-STSLT--------SVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQDTGMYTCMVSNS 419 (440)
T ss_dssp CCEEECTTSCCEECCEE-SSTTS--------EEEEECTTSCEEESSSCCSSEEECTTCCEEESSCCSTTCEEEEEEEECS
T ss_pred cceeeccCceEEEEeec-CCCCC--------ceEEEeCCCceeeccCCCceEEEccCCeEEEccCChhhCEEEEEEEEcC
Confidence 34678889999999999 45555 69999954 12233568999999999999999999999
Q ss_pred CCCcEEEEEEEEecCCE
Q psy6361 74 AGSTSKTIQMNVLVPPF 90 (148)
Q Consensus 74 ~~~~~~~~~l~v~~~p~ 90 (148)
.|..+..+.+.|..+|.
T Consensus 420 ~G~~~~~~~~~v~~~~~ 436 (440)
T 3zyj_A 420 VGNTTASATLNVTGTHH 436 (440)
T ss_dssp SCEEEEEEEEEEC----
T ss_pred CCcEEEEEEEEEecccc
Confidence 99888888888875553
No 348
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.14 E-value=2.3e-10 Score=71.03 Aligned_cols=65 Identities=14% Similarity=0.032 Sum_probs=52.8
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE----------ecCCceEEEecCCCCCCEEEEEEEEeCCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY----------VTRNGSFVINNIAEKDTNVYTCTVSNAAGS 76 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~----------~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 76 (148)
...+..|+.+.|.|.+.+.|.| .+.|++++.. ...+..|.|.++..+|+|.|+|.+.|..+.
T Consensus 109 ~~~~~~g~~~~l~C~~~g~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 180 (191)
T 1epf_A 109 PQEFKEGEDAVIVCDVVSSLPP--------TIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARG 180 (191)
T ss_dssp SEECCTTSCEEECCEEECSSCC--------EEEEEETTEEGGGGCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGT
T ss_pred cEeecCCCeEEEEEEECCCCCC--------EEEEEECCEEeeccCCceEEEecCCeEEECCCChhhCEEEEEEEEEecce
Confidence 3456789999999999988887 6999999722 234558999999999999999999998765
Q ss_pred cEE
Q psy6361 77 TSK 79 (148)
Q Consensus 77 ~~~ 79 (148)
...
T Consensus 181 ~~~ 183 (191)
T 1epf_A 181 EIN 183 (191)
T ss_dssp EEE
T ss_pred eEE
Confidence 333
No 349
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.14 E-value=1.2e-10 Score=76.09 Aligned_cols=91 Identities=14% Similarity=0.117 Sum_probs=57.8
Q ss_pred eeeEeeeccceeeeee---cccCCCCcCCCCccEEEEeeC-C------EE----------------------------ec
Q psy6361 7 VEQAMLLDLIPMHSRY---NYTNLPQSRNPGQVIKRYLKD-L------LY----------------------------VT 48 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~---~~~~~p~~~~~~~~~v~W~~~-~------~~----------------------------~~ 48 (148)
...+..|+.+.|.|.+ .+.+.| .+.|+++ + .. ..
T Consensus 127 ~~~v~~G~~v~L~C~~~~~~~~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 198 (268)
T 3mj6_A 127 DLRVRVGDTTQMRCSIQSTEEKRVT--------KVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISR 198 (268)
T ss_dssp EEEEETTCCEEECCBCEESSSSCCC--------EEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGG
T ss_pred ccccccCCcEEEEEEecCCCCCCcc--------ceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCC
Confidence 4567889999999999 444555 6999993 2 00 02
Q ss_pred CCceEEEecCCCCCCEEEEEEEEeCCCCcEEEEEEEEe-cCCEEEeCCCceEEEecCCc
Q psy6361 49 RNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVL-VPPFFKDEQQESVAIVVNHP 106 (148)
Q Consensus 49 ~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~-~~p~~~~~~~~~~~~~~g~~ 106 (148)
....|.|.++..+|+|.|+|.+.|..+.....+.|.|. .+|.+... +....+.++..
T Consensus 199 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~~~~~-p~~~~~~~~q~ 256 (268)
T 3mj6_A 199 NDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDEFQRTIS-PTPPTDKGQQG 256 (268)
T ss_dssp TBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC-------------------
T ss_pred CeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcCCCeeeeC-CCCCCCCccee
Confidence 35689999999999999999999988877788888885 45555555 55555555543
No 350
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=99.13 E-value=2e-10 Score=66.91 Aligned_cols=76 Identities=22% Similarity=0.250 Sum_probs=53.8
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-------------------------EEe-------cCCceE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-------------------------LYV-------TRNGSF 53 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-------------------------~~~-------~~~~~l 53 (148)
....+..|+++.|.|.+.+.+... ...+.|+|.. +.. ..+.+|
T Consensus 8 ~~vtv~~G~~v~L~C~~~~~~~~~-----~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL 82 (123)
T 4gjt_B 8 DVVTVVLGQDAKLPCFYRGDSGEQ-----VGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSV 82 (123)
T ss_dssp SEEECCTTSEEEECCEECCCTTCC-----EEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCE
T ss_pred CEEEEEcCCCEEEEEEEeCCccCc-----eeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEE
Confidence 456789999999999987654321 1258899853 000 113469
Q ss_pred EEecCCCCCCEEEEEEEEe-CCCCcEEEEEEEEe
Q psy6361 54 VINNIAEKDTNVYTCTVSN-AAGSTSKTIQMNVL 86 (148)
Q Consensus 54 ~i~~~~~~d~g~y~C~~~~-~~~~~~~~~~l~v~ 86 (148)
.|.+++.+|+|.|.|.+.+ ..+.....+.|.|.
T Consensus 83 ~I~~v~~~DsG~Y~C~v~t~~~g~~~~~~~L~Vl 116 (123)
T 4gjt_B 83 LLRNAVQADEGEYECRVSTFPAGSFQARLRLRVL 116 (123)
T ss_dssp EEESCCSSSCSEEEEEEEESSSCEEEEEEEEEC-
T ss_pred EECCCChHHCEEEEEEEEECCCCeEEeEEEEEEE
Confidence 9999999999999999876 34556666777765
No 351
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.13 E-value=3e-10 Score=65.83 Aligned_cols=80 Identities=21% Similarity=0.323 Sum_probs=58.0
Q ss_pred cceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----------------------------EEecC-----
Q psy6361 4 TMNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----------------------------LYVTR----- 49 (148)
Q Consensus 4 ~~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----------------------------~~~~~----- 49 (148)
......+..|+.+.|.|.+.+.+.+. ....+.|++.+ .....
T Consensus 11 ~~~~v~~~~G~~v~L~C~~~~~~~~~----~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 86 (126)
T 1eaj_A 11 PEEMIEKAKGETAYLPCKFTLSPEDQ----GPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKS 86 (126)
T ss_dssp SEEEEEEETTSCEEECCBEECCTTCC----SCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGG
T ss_pred CCceEEEEeCCCEEEEEEEecCCCCC----CceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccC
Confidence 34567889999999999998765431 01258998852 00111
Q ss_pred -CceEEEecCCCCCCEEEEEEEEeCCCCcEEEEEEEEec
Q psy6361 50 -NGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLV 87 (148)
Q Consensus 50 -~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~ 87 (148)
..+|.|.+++.+|+|.|.|.+.+..+.....+.|.|..
T Consensus 87 ~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~ 125 (126)
T 1eaj_A 87 GDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 125 (126)
T ss_dssp TBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CeEEEEECcCChHHCeEEEEEEEcCCccCCcEEEEEEEc
Confidence 25799999999999999999999877666677777653
No 352
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.13 E-value=6.3e-10 Score=68.70 Aligned_cols=72 Identities=17% Similarity=0.193 Sum_probs=56.9
Q ss_pred eeeEeeeccceeeeeecccC-CCCcCCCCccEEEEee---CC-EEec-------------CCceEEEecCC-CCCCEEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTN-LPQSRNPGQVIKRYLK---DL-LYVT-------------RNGSFVINNIA-EKDTNVYT 67 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~-~p~~~~~~~~~v~W~~---~~-~~~~-------------~~~~l~i~~~~-~~d~g~y~ 67 (148)
...+..|+.+.|.|.+.+.| .| .+.|++ ++ .... ....|.|.++. .+|+|.|+
T Consensus 92 ~~~~~~g~~~~l~C~~~g~p~~~--------~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~ 163 (184)
T 3b5h_A 92 SEHINEGETAMLVCKSESVPPVT--------DWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYR 163 (184)
T ss_dssp EEEECTTSCEEEEEECCCSSCCC--------EEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEE
T ss_pred CcEEcCCCcEEEEEEECCCCCCC--------eEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEE
Confidence 34678899999999999888 55 799999 33 2111 12379999999 89999999
Q ss_pred EEEEeCCCCcEEEEEEEEe
Q psy6361 68 CTVSNAAGSTSKTIQMNVL 86 (148)
Q Consensus 68 C~~~~~~~~~~~~~~l~v~ 86 (148)
|.+.|..+.....+.|.|.
T Consensus 164 C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 164 CNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp EEEEETTEEEEEEEEEEEC
T ss_pred EEEEeCCCcceEEEEEEEe
Confidence 9999999887777777664
No 353
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.13 E-value=1.8e-10 Score=68.44 Aligned_cols=78 Identities=13% Similarity=0.137 Sum_probs=56.9
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE---E-----------------------ec-----CCceE
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL---Y-----------------------VT-----RNGSF 53 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~---~-----------------------~~-----~~~~l 53 (148)
.....+..|+++.|.|.+.+.+.. ....+.|++++. . .. ...+|
T Consensus 13 ~~~v~~~~G~~v~L~C~~~~~~~~-----~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL 87 (139)
T 1pko_A 13 GHPIRALVGDEAELPCRISPGKNA-----TGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVAL 87 (139)
T ss_dssp SSCEEEETTSCEEEEEEEESCCCC-----TTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEE
T ss_pred CCCEEEEeCCCEEEeeEccCCCCC-----CceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEE
Confidence 345678999999999998765421 012699999751 0 00 12469
Q ss_pred EEecCCCCCCEEEEEEEEeCCCCcEEEEEEEEec
Q psy6361 54 VINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLV 87 (148)
Q Consensus 54 ~i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~ 87 (148)
.|.+++.+|+|.|+|.+.+..+.....+.|.|..
T Consensus 88 ~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~ 121 (139)
T 1pko_A 88 RIQNVRFSDEGGYTCFFRDHSYQEEAAVELKVED 121 (139)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEccCCHHHCEEEEEEEEcCCCceEEEEEEEEec
Confidence 9999999999999999999877666777888874
No 354
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.12 E-value=3.4e-10 Score=70.14 Aligned_cols=70 Identities=13% Similarity=0.259 Sum_probs=56.2
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeC--CEEe----------------cCCceEEEecCCCCCCEEEEEE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKD--LLYV----------------TRNGSFVINNIAEKDTNVYTCT 69 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~--~~~~----------------~~~~~l~i~~~~~~d~g~y~C~ 69 (148)
..+..|+.+.|.|.+.+.+.| .+.|+++ +... .....|.|.++..+|+|.|+|.
T Consensus 104 ~~~~~g~~v~l~C~~~~~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 175 (192)
T 2va4_A 104 ETTYENGQVTLVCDAEGEPIP--------EITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCE 175 (192)
T ss_dssp EEECTTSEEEEEEEEEEESCC--------EEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEE
T ss_pred ceEEeCCeEEEEEEecCCCCC--------cEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEEE
Confidence 345669999999999998877 6999998 3211 1135799999999999999999
Q ss_pred EEeCCCCcEEEEEEEE
Q psy6361 70 VSNAAGSTSKTIQMNV 85 (148)
Q Consensus 70 ~~~~~~~~~~~~~l~v 85 (148)
+.|..+.....+.|.|
T Consensus 176 a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 176 AASRIGGHQKSMYLDI 191 (192)
T ss_dssp EECSSCEEEEEEEEEE
T ss_pred EEecCCceEEEEEEEe
Confidence 9999988777777765
No 355
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.11 E-value=1.6e-10 Score=74.20 Aligned_cols=78 Identities=22% Similarity=0.301 Sum_probs=57.9
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEee----CCEEe-------------------cCCceEEEecCCCCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLK----DLLYV-------------------TRNGSFVINNIAEKDT 63 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~----~~~~~-------------------~~~~~l~i~~~~~~d~ 63 (148)
...+..|+.+.|.|.+.+.+.| .+.|++ ++... .....|.|.++..+|+
T Consensus 123 ~~~~~~g~~v~L~C~~~~~p~p--------~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 194 (241)
T 3grw_A 123 NQTAVLGSDVEFHCKVYSDAQP--------HIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDG 194 (241)
T ss_dssp SEECCTTCCEEEEEEEECSSCC--------EEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGC
T ss_pred cceecCCCEEEEEEEEecCCCC--------EEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccC
Confidence 4456779999999999998887 699999 54100 1234699999999999
Q ss_pred EEEEEEEEeCCCCcEEEEEEEEecCCEEE
Q psy6361 64 NVYTCTVSNAAGSTSKTIQMNVLVPPFFK 92 (148)
Q Consensus 64 g~y~C~~~~~~~~~~~~~~l~v~~~p~~~ 92 (148)
|.|+|.+.|..+..+..+.|.|..+|...
T Consensus 195 G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~ 223 (241)
T 3grw_A 195 GEYLCRATNFIGVAEKAFWLSVHGPRAAE 223 (241)
T ss_dssp EEEEEEEECSSCEEEEEEEEEC-------
T ss_pred cEEEEEEecCcceEEEEEEEEecCCCCCC
Confidence 99999999999988888888887666544
No 356
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.11 E-value=2.9e-10 Score=70.72 Aligned_cols=72 Identities=13% Similarity=0.244 Sum_probs=57.7
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec-----------CCceEEEecCCC-CCCEEEEEEEEeCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT-----------RNGSFVINNIAE-KDTNVYTCTVSNAA 74 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~-----------~~~~l~i~~~~~-~d~g~y~C~~~~~~ 74 (148)
...+..|+.+.|.|.+.+.|.| .+.|++++.... ....|.|.++.. +|+|.|+|.+.|..
T Consensus 112 ~~~~~~g~~~~l~C~~~~~p~p--------~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~ 183 (197)
T 3lcy_A 112 KYYGAVGSTLRLHVMYIGRPVP--------AMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVF 183 (197)
T ss_dssp EEEEETTSCEEEEEEEEEESCC--------EEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSS
T ss_pred ceeecCCCeEEEEEEEeeeeCC--------eeEEeECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCc
Confidence 3456789999999999998888 699999872221 115788999984 89999999999999
Q ss_pred CCcEEEEEEEEe
Q psy6361 75 GSTSKTIQMNVL 86 (148)
Q Consensus 75 ~~~~~~~~l~v~ 86 (148)
+.....+.|.|.
T Consensus 184 g~~~~~~~l~V~ 195 (197)
T 3lcy_A 184 GTVDAILDVEIQ 195 (197)
T ss_dssp CEEEEEEEEEEE
T ss_pred CceEEEEEEEEe
Confidence 987777777765
No 357
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.10 E-value=7e-10 Score=63.53 Aligned_cols=73 Identities=3% Similarity=-0.018 Sum_probs=54.2
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEecC---------------------CceEEEecCCCCCC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTR---------------------NGSFVINNIAEKDT 63 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~~---------------------~~~l~i~~~~~~d~ 63 (148)
..+..+..|+.+.|.|.+.+ .| .+.|+|+|..... .+.|.|.++..+|+
T Consensus 15 l~d~~v~eG~~a~f~C~vs~--~p--------~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~ 84 (112)
T 2e6q_A 15 LEDVQVYDGEDAVFSLDLST--II--------QGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDS 84 (112)
T ss_dssp CCCEEEETTCEEEEEEEESS--CC--------CCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTC
T ss_pred CCCeEEcCCCcEEEEEEECC--CC--------eEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHC
Confidence 45788999999999999997 44 4899999821111 12699999999999
Q ss_pred EEEEEEEEeCCCCcEEEEEEEEecCCE
Q psy6361 64 NVYTCTVSNAAGSTSKTIQMNVLVPPF 90 (148)
Q Consensus 64 g~y~C~~~~~~~~~~~~~~l~v~~~p~ 90 (148)
|.|+|..-+ .....+.|.|..+|.
T Consensus 85 G~Y~~~~~~---~~~ssA~L~V~~~p~ 108 (112)
T 2e6q_A 85 GALVGFSCP---GVQDSAALTIQESSG 108 (112)
T ss_dssp SEEEEEEET---TEEEEEEEEEECSSC
T ss_pred ccEEEEEEC---CeeEEEEEEEeCCCc
Confidence 999774332 234567888887664
No 358
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=99.10 E-value=3.9e-10 Score=64.62 Aligned_cols=76 Identities=11% Similarity=0.145 Sum_probs=55.9
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E-E----------------e-----cCCceEEEecCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L-Y----------------V-----TRNGSFVINNIA 59 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~-~----------------~-----~~~~~l~i~~~~ 59 (148)
...+..|+++.|.|.+....... .+.|++.. . . . .....|.|.+++
T Consensus 10 ~v~~~~G~~v~L~C~~~~~~~~~-------~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~ 82 (113)
T 1zox_A 10 EVSGQEQGSLTVQCRYTSGWKDY-------KKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLR 82 (113)
T ss_dssp EEEEETTSCEEEEEEECGGGTTS-------CEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCC
T ss_pred EEEEeCCCcEEEEeECCCCcccc-------eEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCC
Confidence 46889999999999998654332 48999863 0 0 0 012379999999
Q ss_pred CCCCEEEEEEEEeCCCCcEEEEEEEEecCC
Q psy6361 60 EKDTNVYTCTVSNAAGSTSKTIQMNVLVPP 89 (148)
Q Consensus 60 ~~d~g~y~C~~~~~~~~~~~~~~l~v~~~p 89 (148)
.+|+|.|.|.+.+........+.|.|...|
T Consensus 83 ~~DsG~Y~C~v~~~~~~~~~~v~L~V~~~p 112 (113)
T 1zox_A 83 MSDAGIYWCGITKGGLDPMFKVTVNIGPVP 112 (113)
T ss_dssp GGGCEEEEEEECCSSSCCEEEEEEEEECC-
T ss_pred HHHCEEEEEeeEcCCCCccEEEEEEEEcCC
Confidence 999999999998875556677788776554
No 359
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.10 E-value=1.8e-10 Score=72.80 Aligned_cols=64 Identities=16% Similarity=0.124 Sum_probs=49.1
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC------------EEecCCceE---EEecCCCCCCEEEEEEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL------------LYVTRNGSF---VINNIAEKDTNVYTCTVS 71 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~------------~~~~~~~~l---~i~~~~~~d~g~y~C~~~ 71 (148)
...+..|+.+.|.|.+.|.|.| .++|++++ .....+..+ .+.++..+|+|.|+|.|.
T Consensus 115 ~~~v~~g~~~~l~C~~~G~P~P--------~v~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~ 186 (203)
T 4fa8_A 115 RSQFPDFSVLTVTCTVNAFPHP--------HVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGK 186 (203)
T ss_dssp ECCSSCSCCEEEEEEEEEESCC--------EEEECCC------------CCEECTTSCEEEEEEEEECSSCCCCEEEEEE
T ss_pred eEEEcCCCEEEEEEEcCCCCCC--------EEEEEECCeeecCcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEE
Confidence 4556779999999999999998 69998864 112233344 446889999999999999
Q ss_pred eCCCCcE
Q psy6361 72 NAAGSTS 78 (148)
Q Consensus 72 ~~~~~~~ 78 (148)
|..|...
T Consensus 187 N~~G~a~ 193 (203)
T 4fa8_A 187 NDKEEAH 193 (203)
T ss_dssp SSSCEEE
T ss_pred cCCCEEE
Confidence 9998754
No 360
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.09 E-value=1.1e-10 Score=68.96 Aligned_cols=78 Identities=14% Similarity=0.159 Sum_probs=52.3
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E------------EecCCceEEEecCCCCCCEEEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L------------YVTRNGSFVINNIAEKDTNVYTC 68 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~------------~~~~~~~l~i~~~~~~d~g~y~C 68 (148)
....+..|+.+.|.|.+.+. + .+.|||+. . .......|.|.++..+|+|.|+|
T Consensus 25 ~~~~v~~G~~v~L~C~~~~~--~--------~v~W~r~~~g~~~~~l~~~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C 94 (133)
T 3khq_A 25 RFAAKKRSSMVKFHCYTNHS--G--------ALTWFRKRGSQQPQELVSEEGRIVQTQNGSVYTLTIQNIQYEDNGIYFC 94 (133)
T ss_dssp SEEEECTTCCEEEEEEESSS--S--------CEEEEEECTTSCCEECCCTTTTEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred ceEEEeCCCeEEEEEEeCCC--C--------EEEEEEeCCCCCCEEEEEeCCCEEEEcCCCEEEEEECCCChHHCEEEEE
Confidence 34678889999999999887 5 59999972 0 11123469999999999999999
Q ss_pred EEEeCCCC----cEEEEEEEEecCCEEEe
Q psy6361 69 TVSNAAGS----TSKTIQMNVLVPPFFKD 93 (148)
Q Consensus 69 ~~~~~~~~----~~~~~~l~v~~~p~~~~ 93 (148)
.+.|..+. ......|.|...|.+..
T Consensus 95 ~a~n~~g~~~~~~g~gt~L~V~~~p~~~~ 123 (133)
T 3khq_A 95 KQKCDSANHNVTDSCGTELLVLGFSTLDQ 123 (133)
T ss_dssp EESSCC-------CCCEEEEEC-------
T ss_pred EEEeCCCCcceeECCCEEEEEEecccchh
Confidence 99887641 33456777776555443
No 361
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.09 E-value=3.2e-10 Score=69.19 Aligned_cols=70 Identities=14% Similarity=0.143 Sum_probs=53.9
Q ss_pred eeEeeeccceeeeeeccc-CCCCcCCCCccEEEEeeCCE---EecCCceEEEecCCCCCCEEEEEEEEeCCCC-cEEEEE
Q psy6361 8 EQAMLLDLIPMHSRYNYT-NLPQSRNPGQVIKRYLKDLL---YVTRNGSFVINNIAEKDTNVYTCTVSNAAGS-TSKTIQ 82 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~-~~p~~~~~~~~~v~W~~~~~---~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~-~~~~~~ 82 (148)
..+..|+.+.|.|.+.+. +.+ .+.|++++. .......|.|.++..+|+|.|+|.+.|..+. .+..+.
T Consensus 95 ~~~~~g~~~~l~C~~~~~~p~~--------~~~W~~~g~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~ 166 (170)
T 3ry4_A 95 LEFQEGETIMLRCHSWKDKPLV--------KVTFFQNGKSQKFSHLDPTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVT 166 (170)
T ss_dssp SEECTTCCEEEEEEEGGGCCEE--------EEEEEETTEEEEEESSCCEEEESSCCGGGCEEEEEEEEETTEEEECCCEE
T ss_pred ceeecCCeEEEEEECCCCCCCc--------eEEEEECCeEccccCCCCeEEEEeccccCCEEEEEEEEeCcCccccccEE
Confidence 346679999999999554 444 799999983 3445778999999999999999999998875 344444
Q ss_pred EEE
Q psy6361 83 MNV 85 (148)
Q Consensus 83 l~v 85 (148)
|.|
T Consensus 167 l~V 169 (170)
T 3ry4_A 167 ITV 169 (170)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 362
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.08 E-value=2.9e-10 Score=74.65 Aligned_cols=114 Identities=11% Similarity=0.146 Sum_probs=70.8
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC---------EEe-----------------------cCCceEEE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL---------LYV-----------------------TRNGSFVI 55 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~---------~~~-----------------------~~~~~l~i 55 (148)
..+..|+.+.|.|.+.+..... ..+.||+.. ... .....|.|
T Consensus 33 ~~~~~G~~v~L~C~~s~~~~~~------~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 106 (267)
T 3u1s_H 33 EVKKPGSSVKVSCKASGNSFSN------HDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMEL 106 (267)
T ss_dssp EEECTTCCEEEEEEEGGGGGGT------SEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEEE
T ss_pred EEEeCCCcEEEEEEeeCCccCC------CEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEEE
Confidence 5688999999999987532111 168888742 000 01234999
Q ss_pred ecCCCCCCEEEEEEEEe-------CC------------C------CcEEEEEEEEe----cCCEEEeCCCceEEEecCCc
Q psy6361 56 NNIAEKDTNVYTCTVSN-------AA------------G------STSKTIQMNVL----VPPFFKDEQQESVAIVVNHP 106 (148)
Q Consensus 56 ~~~~~~d~g~y~C~~~~-------~~------------~------~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~ 106 (148)
.+++.+|+|.|.|.+.+ .. . .......|.|. .+|.+... .+.....+|+.
T Consensus 107 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~~~~~P~v~~~-~~~~~~~~g~~ 185 (267)
T 3u1s_H 107 RGLTADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSASTKGPSVFPL-APSSKSTSGGT 185 (267)
T ss_dssp CSCCGGGCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCCCCBCCEEEEE-CCCGGGEETTE
T ss_pred CCCChhhCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCCCCCCCEEEEe-cCCcccCCCCc
Confidence 99999999999999861 00 0 01112355554 34555432 22222357889
Q ss_pred EEEEeeeec-cc-CCeEEEEECCEEe
Q psy6361 107 MNISCSHYG-VP-TPDFSWYKDGSLL 130 (148)
Q Consensus 107 ~~l~C~~~g-~p-~~~~~W~~~g~~l 130 (148)
+.|.|.+.+ .| .+.+.| |+..+
T Consensus 186 ~~l~C~~~~~~p~~~~v~W--~~~~~ 209 (267)
T 3u1s_H 186 AALGCLVKDYFPEPVTVSW--NSGAL 209 (267)
T ss_dssp EEEEEEEEEEBSSCCEEEE--GGGTB
T ss_pred EEEEEEEeEEECCCeEEEE--CCccc
Confidence 999999876 45 457999 66544
No 363
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.08 E-value=5.8e-09 Score=64.98 Aligned_cols=116 Identities=15% Similarity=0.220 Sum_probs=83.7
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC---EEe--cCCceEEEecCCCCCCEEEEEEEEeCCCCcEEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL---LYV--TRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTI 81 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~---~~~--~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 81 (148)
...+..|+++.+.|...- +.|. .+.|--.- ... .....+.|.+++ +.|.|.|.+.-........+
T Consensus 11 ~~~V~~G~S~~l~Cs~~c-~~p~-------~~glet~l~~~~~~~g~~w~~l~l~~vs--~~g~~~C~~~c~~~~~~~~~ 80 (192)
T 1zxq_A 11 KLAVEPKGSLEVNCSTTC-NQPE-------VGGLETSLNKILLDEQAQWKHYLVSNIS--HDTVLQCHFTCSGKQESMNS 80 (192)
T ss_dssp EEEECTTEEEEEEEEESC-SSCS-------EEEEECSSEEEEEEEETTEEEEEEEEEC--SCEEEEEEEEETTEEEEEEE
T ss_pred CcEEeCCCcEEEEEECCC-CCcc-------ccccccccCceEEcCCCCeEEEEEeccc--cCCeeEEEEECCCcceEEEE
Confidence 456789999999999853 4553 34553221 111 223469999998 78999999987655667888
Q ss_pred EEEEecCCEEEeCCCceEEEecCCcEEEEeeeec-ccCC--eEEEEECCEEeec
Q psy6361 82 QMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYG-VPTP--DFSWYKDGSLLRI 132 (148)
Q Consensus 82 ~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~--~~~W~~~g~~l~~ 132 (148)
.|+|...|......+.+..+.+|+.+.+.|.+.+ .|.. .+.|+++++.+..
T Consensus 81 ~itVy~~P~~v~i~~~p~~~~~G~~~tL~C~v~~v~P~~~L~v~llrG~~~l~~ 134 (192)
T 1zxq_A 81 NVSVYQPPRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHY 134 (192)
T ss_dssp EEEECBCCCCCEEEEESSEECTTSEEEEEEEECSCBCGGGEEEEEEETTEEEEE
T ss_pred EEEEEeCCCCceEccCCccccCCCcEEEEEEeCCeECCCCcEEEEEcCCEEeee
Confidence 9999987765555123457889999999999865 5655 4799999998863
No 364
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.07 E-value=3.7e-10 Score=79.30 Aligned_cols=75 Identities=21% Similarity=0.287 Sum_probs=58.1
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-E-----------EecCCceEEEecCCCCCCEEEEEEEEeC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-L-----------YVTRNGSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-~-----------~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
....+..|+.+.+.|.+. |.| .+.|++++ . ....+.+|.|.+++.+|+|.|+|.|.|.
T Consensus 360 ~~~~v~~G~~~~l~C~~~--p~p--------~i~W~~~~~~~~~~~~~~~~~~~~~~g~L~i~~v~~~D~G~Y~C~a~N~ 429 (452)
T 3zyi_A 360 RDLNISEGRMAELKCRTP--PMS--------SVKWLLPNGTVLSHASRHPRISVLNDGTLNFSHVLLSDTGVYTCMVTNV 429 (452)
T ss_dssp CCEECCTTSCCEECCBCC--TTS--------EEEEECTTSCEECSSCCCSSCEECTTSCEECSSCCTTCCEEEEEEEECS
T ss_pred ccccccCCCEEEEEEeCC--CCC--------cEEEEeCCCcEeccCCCCCCEEECCCCeEEEeecCHHHCEEEEEEEEcC
Confidence 456788999999999988 666 69999954 1 1224468999999999999999999999
Q ss_pred CCCcEEEEEEEEecCCE
Q psy6361 74 AGSTSKTIQMNVLVPPF 90 (148)
Q Consensus 74 ~~~~~~~~~l~v~~~p~ 90 (148)
.|.....+.|.|...+.
T Consensus 430 ~G~~~~~~~l~v~~~~~ 446 (452)
T 3zyi_A 430 AGNSNASAYLNVSTAGT 446 (452)
T ss_dssp SCEEEEEEEEEC-----
T ss_pred CCcEEEEEEEEEEcccc
Confidence 99888888888765443
No 365
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.07 E-value=2.2e-10 Score=72.86 Aligned_cols=73 Identities=16% Similarity=0.234 Sum_probs=59.2
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec--CCceEEEecCCCCCCEEEEEEEEeCCCC-cEEEEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT--RNGSFVINNIAEKDTNVYTCTVSNAAGS-TSKTIQM 83 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~--~~~~l~i~~~~~~d~g~y~C~~~~~~~~-~~~~~~l 83 (148)
...+..|+.+.|.|.+.+.+.| .+.|++++.... ....|.|.++..+|+|.|+|.+.|..+. .+..+.|
T Consensus 127 ~~~v~~G~~v~L~C~~~g~p~~--------~v~W~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l 198 (218)
T 3k0w_A 127 SQKLMPGSTLVLQCVAVGSPIP--------HYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEI 198 (218)
T ss_dssp CEEECTTCCEEEECEEEBSSCC--------EEEEEETTEECTTCCSSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEE
T ss_pred ceeecCCCcEEEEEEecccCCC--------eEEEEECCEECCCCCCCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEE
Confidence 3567789999999999888877 699999984442 3467999999999999999999998776 5556667
Q ss_pred EEec
Q psy6361 84 NVLV 87 (148)
Q Consensus 84 ~v~~ 87 (148)
.|..
T Consensus 199 ~V~~ 202 (218)
T 3k0w_A 199 IIDE 202 (218)
T ss_dssp EECC
T ss_pred EEeC
Confidence 6654
No 366
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.07 E-value=2.5e-10 Score=64.92 Aligned_cols=61 Identities=13% Similarity=0.154 Sum_probs=47.8
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EEe--------------------cCCceEEEecCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LYV--------------------TRNGSFVINNIAE 60 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~~--------------------~~~~~l~i~~~~~ 60 (148)
....+..|+++.|.|.+.+.+.| .+.|+++. ... .....|.|.++..
T Consensus 9 ~~~~~~~G~~v~L~C~~~~~~~~--------~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 80 (108)
T 1jhl_L 9 SYLVASPGETITINCRASKSISK--------SLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEP 80 (108)
T ss_dssp SEEEECTTSCEEEEEEESSCCTT--------CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCT
T ss_pred CeeEEcCCCCEEEEeEECCCCCc--------eEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCEEEEEECCCCH
Confidence 34678999999999999988766 59999852 100 0124799999999
Q ss_pred CCCEEEEEEEEeCC
Q psy6361 61 KDTNVYTCTVSNAA 74 (148)
Q Consensus 61 ~d~g~y~C~~~~~~ 74 (148)
+|+|.|.|.+.+..
T Consensus 81 ~DsG~Y~C~~~n~~ 94 (108)
T 1jhl_L 81 EDFAMYICQQHNEY 94 (108)
T ss_dssp TCCSEEEEEECSSS
T ss_pred HHCEEEEEEEccCC
Confidence 99999999998763
No 367
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.07 E-value=6.8e-10 Score=70.24 Aligned_cols=66 Identities=17% Similarity=0.253 Sum_probs=53.5
Q ss_pred eeeEeeeccceeeeee-cccCCCCcCCCCccEEEEeeCCEEec----------------CCceEEEecCCCCCCEEEEEE
Q psy6361 7 VEQAMLLDLIPMHSRY-NYTNLPQSRNPGQVIKRYLKDLLYVT----------------RNGSFVINNIAEKDTNVYTCT 69 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~-~~~~~p~~~~~~~~~v~W~~~~~~~~----------------~~~~l~i~~~~~~d~g~y~C~ 69 (148)
...+..|+.+.|.|.+ .+.|.| .+.|++++.... ....|.|.++..+|+|.|+|.
T Consensus 117 ~~~~~~g~~v~l~C~~~~g~p~~--------~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 188 (217)
T 2vr9_A 117 DTRVAKGETALLECGPPKGIPEP--------TLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYKCI 188 (217)
T ss_dssp CEEECTTSCEEECCBCCCEESCC--------EEEEEETTEEECCCCCC---CCCSEEEETTTEEEESSCCSTTCEEEEEE
T ss_pred ccEEcCCCeEEEEEECCCCCCCC--------eEEEEECCcCCCcccccccccCCcEEecCCCcEEEeeCCHHHCeEEEEE
Confidence 4557889999999999 777777 699999973322 345799999999999999999
Q ss_pred EEeCCCCcEEE
Q psy6361 70 VSNAAGSTSKT 80 (148)
Q Consensus 70 ~~~~~~~~~~~ 80 (148)
+.|..|.....
T Consensus 189 a~N~~G~~~~~ 199 (217)
T 2vr9_A 189 AQNLVGTRESS 199 (217)
T ss_dssp EEETTEEEECC
T ss_pred EEcccceeccc
Confidence 99998875444
No 368
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=99.06 E-value=2e-09 Score=61.24 Aligned_cols=71 Identities=10% Similarity=0.177 Sum_probs=51.1
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE-------------------------EecCCceEEEecCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL-------------------------YVTRNGSFVINNIAE 60 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~-------------------------~~~~~~~l~i~~~~~ 60 (148)
....+..|+++.|.|.+.+.+.+. ...+.+.|++++. ....+.+|.|.+++.
T Consensus 2 ~~v~~~~G~~v~L~C~~~~~~~~~---~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~sL~I~~v~~ 78 (110)
T 1ncn_A 2 LKIQAYFNETADLPCQFANSQNQS---LSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQI 78 (110)
T ss_dssp EEEEEETTSCEEEECCCCCTTCCC---GGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEETTTTEEEECSCCG
T ss_pred cEEEEEeCCCEEEEeEeCCCCcCC---CccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEECCCEEEEEcCCCh
Confidence 356889999999999997654331 0112489998640 112346899999999
Q ss_pred CCCEEEEEEEEeCCCCcEE
Q psy6361 61 KDTNVYTCTVSNAAGSTSK 79 (148)
Q Consensus 61 ~d~g~y~C~~~~~~~~~~~ 79 (148)
+|+|.|.|.+.+..+....
T Consensus 79 ~D~G~Y~C~v~~~~~~~~~ 97 (110)
T 1ncn_A 79 KDKGLYQCIIHHKKPTGMI 97 (110)
T ss_dssp GGCEEEEEEEEEECSSSEE
T ss_pred HHCEEEEEEEEcCCCCceE
Confidence 9999999999887765433
No 369
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.06 E-value=1.2e-09 Score=62.06 Aligned_cols=59 Identities=24% Similarity=0.399 Sum_probs=48.7
Q ss_pred cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceEE------EEEEEEee
Q psy6361 87 VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYIT------FFLFFQRL 146 (148)
Q Consensus 87 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~~------~~l~~~~~ 146 (148)
.+|.|... +.+..+.+|+.+.|.|.+.|.|.|.+.|+|||..+..+.++.. ..|.|..+
T Consensus 12 ~pP~f~~~-p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v 76 (107)
T 3knb_B 12 SPPCFLRF-PRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAA 76 (107)
T ss_dssp EEEEEEEC-CCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSC
T ss_pred CCCEEEeC-CCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecC
Confidence 46788877 8889999999999999999999999999999999987766542 24666543
No 370
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.05 E-value=1.7e-09 Score=71.97 Aligned_cols=116 Identities=11% Similarity=0.101 Sum_probs=80.5
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeC--C-EE-ecCC--ceEEEecCCCCCCEEEEEEEEeCCCCcEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKD--L-LY-VTRN--GSFVINNIAEKDTNVYTCTVSNAAGSTSKT 80 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~--~-~~-~~~~--~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 80 (148)
...+..|+++.|.|... -+.|. .+.|.-. . .. ..+. ..+.+.++... +.|.|.+..........
T Consensus 8 ~~~V~~G~sv~l~Cs~~-c~~p~-------~~~~~t~l~~~~~~~~g~~~~~~~l~~v~~~--~~y~C~~~~~~~~~~~~ 77 (291)
T 1mq8_A 8 KVILPRGGSVLVTCSTS-CDQPK-------LLGIETPLPKKELLLPGNNRKVYELSNVQED--SQPMCYSNCPDGQSTAK 77 (291)
T ss_dssp EEEECTTCEEEEEEEEC-CSSCS-------EEEEECSSCCCCCCCSCSSEEEEEEESCCSC--CCCEEEEECSSCEEEEE
T ss_pred ccEEcCCCeEEEEEeCC-CCCCc-------cceEEecCCCcccccCCCceEEEEEEecccC--CeEEEEEEcCCccEEEE
Confidence 45789999999999986 34443 4778532 1 11 1111 24778888743 46999997544446677
Q ss_pred EEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecc-cCC--eEEEEECCEEeec
Q psy6361 81 IQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGV-PTP--DFSWYKDGSLLRI 132 (148)
Q Consensus 81 ~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~--~~~W~~~g~~l~~ 132 (148)
+.+.|..+|......+....+.+|+.+.|.|.+.|. |.. .++|||+++.+..
T Consensus 78 v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~ 132 (291)
T 1mq8_A 78 TFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKR 132 (291)
T ss_dssp CEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEE
T ss_pred EEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeec
Confidence 788888777765553334458899999999998765 443 5899999988764
No 371
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=99.05 E-value=3.5e-10 Score=82.61 Aligned_cols=101 Identities=14% Similarity=0.028 Sum_probs=57.8
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE---------EecCCceEEEecCCCCCCEEEEEEEEeCCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL---------YVTRNGSFVINNIAEKDTNVYTCTVSNAAGS 76 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~---------~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 76 (148)
....+..|+.+.|.|.+.+ +.| ++.|++++. ....+..|.|.+++..|+|.|.|.+.+..+.
T Consensus 541 ~~v~v~~g~~~~L~C~~~s-p~a--------~v~W~~~~~~l~~~~~~~~~~~~~~LlI~~v~~~DsG~Y~C~A~e~~~~ 611 (663)
T 1olz_A 541 RQHFFKHGGTAELKCSQKS-NLA--------RVFWKFQNGVLKAESPKYGLMGRKNLLIFNLSEGDSGVYQCLSEERVKN 611 (663)
T ss_dssp EEEEEETTSCEEECCCCSC-TTC--------EEEEEESSSBCCCCSSSBCCTTTTCEEECSCCGGGCEEEEEEEEEECSS
T ss_pred eEEEEecCCcEEEEccCCC-CCC--------cEEEEECCeeccccCcceEEecCCeEEEEecCcccCeEEEEEEEECccC
Confidence 3457788999999999999 777 799999871 1223578999999999999999999987422
Q ss_pred -----cEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeec
Q psy6361 77 -----TSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYG 115 (148)
Q Consensus 77 -----~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g 115 (148)
......|.|..+|.+...........+|+.+.+.|.+..
T Consensus 612 ~~~~~~~~~~~l~V~v~P~~~~~p~~~~~~~~g~~~~~~~~~~~ 655 (663)
T 1olz_A 612 KTVFQVVAKHVLEVKVVPKPVVAPTLSVVQTEGSRIATKVLVAS 655 (663)
T ss_dssp SEEEEEEEEEEEEEEC----------------------------
T ss_pred CCceEEEEEEEEEEEeCCccCCCCCChhhhhcCCceEEEeeccc
Confidence 346678888889988866233456778999999999744
No 372
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.04 E-value=9.8e-10 Score=69.03 Aligned_cols=71 Identities=14% Similarity=0.313 Sum_probs=56.4
Q ss_pred eeEeeeccceeeee-ecccCCCCcCCCCccEEEEeeCCE-Ee------------------cCCceEEEecCCCCCCEEEE
Q psy6361 8 EQAMLLDLIPMHSR-YNYTNLPQSRNPGQVIKRYLKDLL-YV------------------TRNGSFVINNIAEKDTNVYT 67 (148)
Q Consensus 8 ~~~~~g~~~~l~C~-~~~~~~p~~~~~~~~~v~W~~~~~-~~------------------~~~~~l~i~~~~~~d~g~y~ 67 (148)
..+..|+.+.|.|. ..+.|.| .+.|++++. .. .....|.|.++..+|+|.|+
T Consensus 114 ~~~~~g~~~~l~C~~~~~~p~~--------~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 185 (212)
T 1f97_A 114 SSVTIGNRAVLTCSEHDGSPPS--------EYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYY 185 (212)
T ss_dssp SEEETTSCEEEEEECSCCBSCC--------EEEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEE
T ss_pred cccCCCCeEEEEEEcccCcCCC--------EEEEEeCCcccccccccccccccCceeEecCCCceEEEEecChhhCcEEE
Confidence 35778999999999 6777777 699999874 21 23568999999999999999
Q ss_pred EEEEeCCCCc--EEEEEEEEe
Q psy6361 68 CTVSNAAGST--SKTIQMNVL 86 (148)
Q Consensus 68 C~~~~~~~~~--~~~~~l~v~ 86 (148)
|.+.|..+.. +..+.|.|.
T Consensus 186 C~a~n~~g~~~~s~~~~l~V~ 206 (212)
T 1f97_A 186 CQAQNGYGTAMRSEAAHMDAV 206 (212)
T ss_dssp EEEECSSSCCEECCCEEEEEE
T ss_pred EEEccccCCccccceEEEEEE
Confidence 9999998876 445555554
No 373
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=99.04 E-value=1.6e-09 Score=61.37 Aligned_cols=76 Identities=13% Similarity=0.164 Sum_probs=53.8
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE-------------------------Ee-----cCCceEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL-------------------------YV-----TRNGSFVI 55 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~-------------------------~~-----~~~~~l~i 55 (148)
....+..|+++.|.|.+.+.+.+. ...+.|++... .. ....+|.|
T Consensus 2 ~~v~~~~G~~v~L~C~~~~~~~~~-----~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I 76 (109)
T 2oyp_A 2 DGYKVEVGKNAYLPCSYTLPTSGT-----LVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLII 76 (109)
T ss_dssp EEEEECTTSCEEECCBCCCCTTCC-----CCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEE
T ss_pred CCEEEEcCCCEEEEEEeECCCCCC-----eEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEE
Confidence 467789999999999987654321 12489998420 01 11247999
Q ss_pred ecCCCCCCEEEEEEEEeCCCCcEEEEEEEEe
Q psy6361 56 NNIAEKDTNVYTCTVSNAAGSTSKTIQMNVL 86 (148)
Q Consensus 56 ~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 86 (148)
.+++.+|+|.|.|.+.+..+.....+.|.|.
T Consensus 77 ~~v~~~D~G~Y~C~v~~~~~~~~~~~~l~V~ 107 (109)
T 2oyp_A 77 KNVTLDDHGTYCCRIQFPGLMNDKKLELKLD 107 (109)
T ss_dssp CSCCGGGCEEEEEEECCSSTTCCEEEEEEEE
T ss_pred ccCCChhCeEEEEEEEcCCcccceEEEEEEE
Confidence 9999999999999999876555555555554
No 374
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.03 E-value=2.7e-10 Score=73.47 Aligned_cols=61 Identities=13% Similarity=0.100 Sum_probs=49.5
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe--------------------------------cCCceEEE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV--------------------------------TRNGSFVI 55 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~--------------------------------~~~~~l~i 55 (148)
..+..|+.+.|.|.+.+.+.| .+.|+|++... .....|.|
T Consensus 146 ~~v~~g~~v~L~C~~~g~p~p--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i 217 (250)
T 2fbo_J 146 VQVDEGNDITMTCPCTDCANA--------NVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVI 217 (250)
T ss_dssp EECCTTCCEEECCCEESCTTC--------EEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEE
T ss_pred EEecCCCcEEEEEEecCCCCC--------eeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEE
Confidence 444569999999999998888 69999985211 02368999
Q ss_pred ecCCCCCCEEEEEEEEeCCCC
Q psy6361 56 NNIAEKDTNVYTCTVSNAAGS 76 (148)
Q Consensus 56 ~~~~~~d~g~y~C~~~~~~~~ 76 (148)
.++..+|+|.|+|.+.|..+.
T Consensus 218 ~~v~~~D~G~Y~C~a~N~~g~ 238 (250)
T 2fbo_J 218 RAAKITDAGRVWCELATGQGE 238 (250)
T ss_dssp CSCCGGGCEEEEEEEESSSSG
T ss_pred ecCCcccCEEEEEEecCCccc
Confidence 999999999999999997664
No 375
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.03 E-value=2.3e-10 Score=74.84 Aligned_cols=105 Identities=9% Similarity=0.029 Sum_probs=51.9
Q ss_pred eEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE--Ee----------cCCceEEEecCCCCCCEEEEEEEEeCCC-
Q psy6361 9 QAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL--YV----------TRNGSFVINNIAEKDTNVYTCTVSNAAG- 75 (148)
Q Consensus 9 ~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~--~~----------~~~~~l~i~~~~~~d~g~y~C~~~~~~~- 75 (148)
.+..|+.++|.|.+.+.+ + .+.|+|++. .. .....|.|.+++ |+|.|+|.+.+...
T Consensus 117 ~V~~G~~vtL~C~~~~~~-~--------~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p 185 (257)
T 1b6u_A 117 TVLAGESVTLSCSSRSSY-D--------MYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSP 185 (257)
T ss_dssp TCBTTCEEEEEEECSSCC-S--------EEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCT
T ss_pred ccCCCCEEEEEEeCCCCC-c--------EEEEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCC
Confidence 467899999999987643 3 699999971 11 125689999998 99999999997532
Q ss_pred ----CcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEE
Q psy6361 76 ----STSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYK 125 (148)
Q Consensus 76 ----~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~ 125 (148)
..+..+.|.|..+|......+.......|..+.|.|.. |.+.+.+.|..
T Consensus 186 ~~~s~~S~pl~L~V~g~p~~~~p~~~~~~~~~g~~~~l~~~~-~~~~~~~~~~~ 238 (257)
T 1b6u_A 186 YEWSNSSDPLLVSVTGNPSNSWPSPTEPSSETGNPRHLHAAA-EQKLISEEDLN 238 (257)
T ss_dssp TBBCCCCCCEEECCBCCC------------------------------------
T ss_pred cccccCCCCEEEEEeccCCCCCCCCcccCccCCCeEEEEEEE-cchHHHHHHhh
Confidence 23455677777777765331222345568888999776 44556777864
No 376
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=99.03 E-value=2.5e-09 Score=60.89 Aligned_cols=74 Identities=15% Similarity=0.194 Sum_probs=53.4
Q ss_pred cceeeeEeeeccceeeeee-cccCCCCcCCCCccEEEEeeCC-E-E---------------------ec-CCceEEEecC
Q psy6361 4 TMNVEQAMLLDLIPMHSRY-NYTNLPQSRNPGQVIKRYLKDL-L-Y---------------------VT-RNGSFVINNI 58 (148)
Q Consensus 4 ~~~~~~~~~g~~~~l~C~~-~~~~~p~~~~~~~~~v~W~~~~-~-~---------------------~~-~~~~l~i~~~ 58 (148)
......+..|+++.|.|.+ .+.+.+ .+.|++.. . . .. ...+|.|.++
T Consensus 9 ~~~~v~~~~G~~v~L~C~~~~~~~~~--------~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v 80 (110)
T 2ptt_A 9 SIPDINAYTGSNVTLKIHKDPLGPYR--------RITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEENNGALHISNV 80 (110)
T ss_dssp CCCSEEEETTSCEEECSCSSCCCSCS--------EEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECTTTCCEEESSC
T ss_pred CCCCEEEecCCcEEEeCCccCCCCcC--------EEEEEecCCccEEEEECCCCceeeccccCCcEEEeCCCccEEECCC
Confidence 3445789999999999998 444444 69999842 1 0 01 3467999999
Q ss_pred CCCCCEEEEEEEEeCCCCcEEEEEEEEe
Q psy6361 59 AEKDTNVYTCTVSNAAGSTSKTIQMNVL 86 (148)
Q Consensus 59 ~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 86 (148)
+.+|+|.|.|.+.+.. .....+.|.|.
T Consensus 81 ~~~DsG~Y~C~v~~~~-~~~~~~~L~V~ 107 (110)
T 2ptt_A 81 RKEDKGTYYMRVLRET-ENELKITLEVF 107 (110)
T ss_dssp CGGGCEEEEEEEESSS-BCCEEEEEEEE
T ss_pred CcccCeEEEEEEEcCC-CcEEEEEEEEE
Confidence 9999999999998755 33345666664
No 377
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.03 E-value=1.5e-09 Score=68.94 Aligned_cols=78 Identities=8% Similarity=0.034 Sum_probs=54.6
Q ss_pred eEeeeccceeeeee-cccCCCCcCCCCccEEEEeeC-C----------EEecCCc---eEEEecCCCCCCEEEEEEEEeC
Q psy6361 9 QAMLLDLIPMHSRY-NYTNLPQSRNPGQVIKRYLKD-L----------LYVTRNG---SFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 9 ~~~~g~~~~l~C~~-~~~~~p~~~~~~~~~v~W~~~-~----------~~~~~~~---~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
.+..|+.+.|.|.+ .+.|.| .+.|+++ + ....... .|.|.++..+|+|.|+|.+.|.
T Consensus 121 ~v~~G~~~~l~C~~~~g~P~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 192 (222)
T 4i0k_A 121 DLRPGNMVTITCSSYQGYPEA--------EVFWKDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNP 192 (222)
T ss_dssp ---CCSEEEEEEEEEEEBSCC--------EEEEECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEET
T ss_pred eecCCceEEEEEecccccCCC--------eEEEEcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECC
Confidence 45678999999999 666776 6999994 3 1111222 3788999999999999999999
Q ss_pred CCCcEEEEEEEEecCCEEEeC
Q psy6361 74 AGSTSKTIQMNVLVPPFFKDE 94 (148)
Q Consensus 74 ~~~~~~~~~l~v~~~p~~~~~ 94 (148)
.+.....+.|.|..+|.....
T Consensus 193 ~g~~~~~~~l~V~~~p~~~~~ 213 (222)
T 4i0k_A 193 VLQQDAHGSVTITGQPLTFPP 213 (222)
T ss_dssp TTTEEEEEEEECCC-------
T ss_pred CCCCceEEEEEEeCCccccCC
Confidence 999888888888877755543
No 378
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=99.03 E-value=2.4e-09 Score=59.30 Aligned_cols=73 Identities=14% Similarity=0.229 Sum_probs=55.6
Q ss_pred eeeeEeeeccceeeeeecc-cCCCCcCCCCccEEEEeeCC----E--------EecCCc----eEEEecCCCCCCEEEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNY-TNLPQSRNPGQVIKRYLKDL----L--------YVTRNG----SFVINNIAEKDTNVYTC 68 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~-~~~p~~~~~~~~~v~W~~~~----~--------~~~~~~----~l~i~~~~~~d~g~y~C 68 (148)
..-.+..|+.+.|+|.+.+ .+.| .++|-|-+ . -...+. .|.+..+-.+|+|.|.|
T Consensus 19 S~hsv~~G~~f~leCpv~yc~~rP--------~VtWcKln~~~c~~L~~~~q~w~E~~N~s~fvLhf~~V~~sDsGsYRC 90 (120)
T 2aw2_A 19 SEHSILAGDPFELECPVKYCANRP--------HVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRC 90 (120)
T ss_dssp EEEEEETTSCEEEEEEEECSSSCC--------EEEEEEECSSCEEECCSSCEEEEECSSCEEEEEEESSCCGGGCEEEEE
T ss_pred ccceEecCCeEEEEccEEeccCCC--------ceEEEecCCceEEECccccccceecCCeeEEEEEEeeeeEcCCcceEE
Confidence 4567899999999999999 5888 69998854 1 112223 78999999999999999
Q ss_pred EEEeCCCC-cEEEEEEEEe
Q psy6361 69 TVSNAAGS-TSKTIQMNVL 86 (148)
Q Consensus 69 ~~~~~~~~-~~~~~~l~v~ 86 (148)
.|....+. .+..+.+.|.
T Consensus 91 sAn~~sg~ieSHsvtI~Vt 109 (120)
T 2aw2_A 91 SANFQSNLIESHSTTLYVT 109 (120)
T ss_dssp EEEETTEEEECCCEEEEEE
T ss_pred EeeCCCCcEEeeEEEEEEE
Confidence 99988876 4444455443
No 379
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.02 E-value=3.5e-10 Score=69.82 Aligned_cols=62 Identities=5% Similarity=-0.099 Sum_probs=49.1
Q ss_pred eccceeeeeecccCCCCcCCCCccEEEEeeCCEEecCCceEEEecCCCCCCEEEEEEEEeCCCCcEEEEE
Q psy6361 13 LDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQ 82 (148)
Q Consensus 13 g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 82 (148)
+..+.|.|.+.+.|.| .+.|++++........+.|..+..+|+|.|+|.|.|..+.......
T Consensus 110 ~~~v~L~C~~~g~p~p--------~i~W~~~g~~l~~~~~~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~ 171 (176)
T 1hng_A 110 CSNATLTCEVLEGTDV--------ELKLYQGKEHLRSLRQKTMSYQWTNLRAPFKCKAVNRVSQESEMEV 171 (176)
T ss_dssp TTTTEEEEECSSCSSC--------EEEEEETTEEEEEESSSEEEEECSCCSSCEEEEEEETTEEEEEEEC
T ss_pred CCcEEEEEEecCCCCc--------EEEEEECCEECCCCCcEEEEEEEccCCeEEEEEEEecCCCceeccc
Confidence 3468999999998887 6999999855444444677788899999999999999887555443
No 380
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.02 E-value=3.1e-10 Score=70.58 Aligned_cols=57 Identities=12% Similarity=0.184 Sum_probs=47.4
Q ss_pred eEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec----CCceEEEecCCCCCCEEEEEEEEeCCCC
Q psy6361 9 QAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT----RNGSFVINNIAEKDTNVYTCTVSNAAGS 76 (148)
Q Consensus 9 ~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 76 (148)
.+..|+.+.|.|.+ |.| .+.|+|++.... ....|.|.++..+|+|.|+|.|.|..+.
T Consensus 118 ~~~~G~~v~l~C~~---p~p--------~i~W~k~g~~i~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~ 178 (186)
T 1jbj_A 118 GSRGDGSVLLTCGL---TDK--------TIKWLKDGSIISPLNATKNTWNLGNNAKDPRGTYQCQGAKETSN 178 (186)
T ss_dssp CCSSSCEEEEECSS---SCS--------CEEEEETTEECCCSSCCSSCCEEEETTSCCEEEEEEEESSCEEE
T ss_pred ecCCCCeEEEEeeC---CCC--------eEEEEECCEECcccCCCcceEEECCCCcCcCEEEEEEEEcCcCC
Confidence 34489999999998 555 599999984432 5678999999999999999999997764
No 381
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=99.02 E-value=7.9e-10 Score=64.23 Aligned_cols=78 Identities=14% Similarity=0.221 Sum_probs=56.4
Q ss_pred CCcceeeeEeeeccceeeeeec-ccCCCCcCCCCccEEEEeeCCE----------------------Eec-CCceEEEec
Q psy6361 2 SGTMNVEQAMLLDLIPMHSRYN-YTNLPQSRNPGQVIKRYLKDLL----------------------YVT-RNGSFVINN 57 (148)
Q Consensus 2 ~~~~~~~~~~~g~~~~l~C~~~-~~~~p~~~~~~~~~v~W~~~~~----------------------~~~-~~~~l~i~~ 57 (148)
.|......+..|+++.|.|... ..... .+.|++... ... .+.+|.|.+
T Consensus 8 ~g~~~pv~~~~G~~VtL~c~~~~~~~~~--------~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~~~~~sL~I~n 79 (121)
T 2edo_A 8 QGHLVHMTVVSGSNVTLNISESLPENYK--------QLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISK 79 (121)
T ss_dssp SSCCBCCEEETTSCEEECCSSCCCSSEE--------EEEEEEETTEEEEEECSSCEEECSCTTTTTCEECTTTCCEEESS
T ss_pred cCCcEEEEEEeCCCEEEeCCCCCCCcee--------EEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEeCCCceEEEeC
Confidence 3555567899999999999873 22222 689998530 111 456899999
Q ss_pred CCCCCCEEEEEEEEeCCCC-cEEEEEEEEec
Q psy6361 58 IAEKDTNVYTCTVSNAAGS-TSKTIQMNVLV 87 (148)
Q Consensus 58 ~~~~d~g~y~C~~~~~~~~-~~~~~~l~v~~ 87 (148)
++.+|+|.|.|.+.+..+. ....+.|.|..
T Consensus 80 v~~~DsG~Y~c~v~~~~~~~~~~~~~L~V~~ 110 (121)
T 2edo_A 80 VQKEDNSTYIMRVLKKTGNEQEWKIKLQVLD 110 (121)
T ss_dssp CCGGGCSEEEEEEEETTTEEEECCEECEEEC
T ss_pred CCHHHCeEEEEEEEcCCCcEEEEEEEEEEEC
Confidence 9999999999999876543 45566777764
No 382
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=99.02 E-value=7.6e-10 Score=63.55 Aligned_cols=73 Identities=16% Similarity=0.201 Sum_probs=51.3
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE------------------------E------ecCCceEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL------------------------Y------VTRNGSFVI 55 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~------------------------~------~~~~~~l~i 55 (148)
....+..|+.+.|.|.+....... .+.|++... . .....+|.|
T Consensus 5 ~~v~~~~G~~v~L~C~~~~~~~~~-------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I 77 (116)
T 2or8_A 5 VEVKGVVGHPVTLPCTYSTYRGIT-------TTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTI 77 (116)
T ss_dssp EEEEEETTSCEEECCBCCCTTCCC-------CEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEE
T ss_pred ceEEEEeCCcEEEEEEeeCCCCCc-------EEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEE
Confidence 467889999999999987632221 589998630 0 011247999
Q ss_pred ecCCCCCCEEEEEEEEeCCCCc--EEEEEEEE
Q psy6361 56 NNIAEKDTNVYTCTVSNAAGST--SKTIQMNV 85 (148)
Q Consensus 56 ~~~~~~d~g~y~C~~~~~~~~~--~~~~~l~v 85 (148)
.+++.+|+|.|.|.+.+..+.. ...+.|.|
T Consensus 78 ~~v~~~DsG~Y~C~v~~~~~~~~~~~~~~l~V 109 (116)
T 2or8_A 78 ENSVESDSGLYCCRVEIPGWFNDQKVTFSLQV 109 (116)
T ss_dssp SSCCGGGCEEEEEEECCSSTTCCEEEEEEEEE
T ss_pred CCCCcccCEEEEEEEEcCCcccccEEEEEEEE
Confidence 9999999999999998765433 44444444
No 383
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.01 E-value=1.2e-09 Score=68.07 Aligned_cols=69 Identities=17% Similarity=0.253 Sum_probs=55.2
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe------cCCceEEEecCCCCCCEEEEEEEEeCCCCcE-EE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV------TRNGSFVINNIAEKDTNVYTCTVSNAAGSTS-KT 80 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~-~~ 80 (148)
..+..|+.+.|.|.+.+.|.|. .+.|++++... .....|.|.++. |+|.|+|.+.|..|... ..
T Consensus 116 ~~~~~g~~~~l~C~~~g~p~p~-------~v~W~~~~~~~~~~~~~~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~ 186 (195)
T 2c5d_C 116 RTVAANTPFNLSCQAQGPPEPV-------DLLWLQDAVPLATAPGHGPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRT 186 (195)
T ss_dssp EEECTTCCEEEEEEEECSSCCC-------EEEEEESSCBSSSSTTSSCCEEEEECCCS--SCEEEEEEEEETTEEEECCC
T ss_pred EEEcCCCEEEEEeECCCCCCCC-------EEEEEECCEeccCCCCcCCCCeEEEcccc--cCceEEEEEEcCCCceEEEE
Confidence 4677899999999999988873 59999997322 245689998886 89999999999988753 56
Q ss_pred EEEEE
Q psy6361 81 IQMNV 85 (148)
Q Consensus 81 ~~l~v 85 (148)
+.|.|
T Consensus 187 ~~l~V 191 (195)
T 2c5d_C 187 ATITV 191 (195)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77776
No 384
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=99.01 E-value=4.8e-10 Score=63.85 Aligned_cols=64 Identities=11% Similarity=0.167 Sum_probs=45.1
Q ss_pred eEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEE---ecCCceEEEecCCCCCCEEEEEEEEeCCC
Q psy6361 9 QAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLY---VTRNGSFVINNIAEKDTNVYTCTVSNAAG 75 (148)
Q Consensus 9 ~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~---~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 75 (148)
.+..|+.|+|.|.....+.+. ...+.+.|+|++.. ......|.|.+++.+|+|.|.|.+.+..+
T Consensus 18 ~v~~G~~VtL~C~~~~~~~~~---~~~~~~~w~k~g~~l~~~~~~~~l~i~~v~~~dsG~Y~C~~~~~~~ 84 (108)
T 4hwn_A 18 EPQAGSPMTLSCQTKLPLQRS---AARLLFSFYKDGRIVQSRGLSSEFQIPTASEDHSGSYWCEAATEDN 84 (108)
T ss_dssp SCBTTCCEEEEEEC------------CCEEEEEETTEEEEEEESCCEEEESSCCGGGCEEEEEEEECTTS
T ss_pred cCCCCCcEEEEEcccCCCCCc---CcceEEEEEECCcCccCCCcccEEEeCccCcccCeEEEEEEEeCCC
Confidence 467799999999987543320 11124999999833 23567899999999999999999998654
No 385
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.01 E-value=1.5e-09 Score=78.47 Aligned_cols=71 Identities=20% Similarity=0.224 Sum_probs=61.1
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----------EEecCCceEEEecCCCCCCEEEEEEEEeCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----------LYVTRNGSFVINNIAEKDTNVYTCTVSNAAG 75 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 75 (148)
...+..|+++.|.|.+.+.|.| .++|+|++ ........|.|.++..+|+|.|+|.|.|..|
T Consensus 491 ~~~v~~G~~~~~~~~v~g~P~P--------~v~W~k~~~el~~s~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~N~~G 562 (573)
T 3uto_A 491 GTEVGEGQSANFYCRVIASSPP--------VVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYG 562 (573)
T ss_dssp CEEECTTSCEEEEEEEECSSCC--------EEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTE
T ss_pred CcEEeCCCcEEEEEEEEccCCC--------eEEEEECCEEcccCCcEEEEEcCCEEEEEEcCCCcccCcEEEEEEEeCCC
Confidence 4567889999999999999999 69999997 2333456799999999999999999999999
Q ss_pred CcEEEEEEEE
Q psy6361 76 STSKTIQMNV 85 (148)
Q Consensus 76 ~~~~~~~l~v 85 (148)
..+..+.|.|
T Consensus 563 ~~~~~v~l~V 572 (573)
T 3uto_A 563 TKEEIVFLNV 572 (573)
T ss_dssp EEEEEEEEEE
T ss_pred cEEEEEEEEE
Confidence 9888887776
No 386
>3gsn_A RA14 TCR alpha chain (TRAV24, TRAJ49); HLA, human cytomegalovirus, PP65, T cell receptor (TCR), immune response, public response; 2.80A {Homo sapiens}
Probab=99.00 E-value=1.9e-10 Score=72.45 Aligned_cols=114 Identities=11% Similarity=0.082 Sum_probs=73.6
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC---------------------EEe------cCCceEEEecC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL---------------------LYV------TRNGSFVINNI 58 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~---------------------~~~------~~~~~l~i~~~ 58 (148)
....+..|+.+.|.|.+.+.... .+.||+.. +.. .....|.|.++
T Consensus 8 ~~v~v~~G~svtL~C~~s~~~~~--------~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l 79 (199)
T 3gsn_A 8 QSLHVQEGDSTNFTCSFPSSNFY--------ALHWYRWETAKSPEALFVMTLNGDEKKKGRISATLNTKEGYSYLYIKGS 79 (199)
T ss_dssp SEEEEETTCCCEEEEECCCTTCC--------CEEEEEECTTSCCEEEEEECSTTCCCEETTEECCCBTTTTEEEEEBSSC
T ss_pred CEEEEeCCCCEEEEEEEcCCCCC--------EEEEEEECCCCCcEEEEEECCCCCccccCceEEEECCCCCEEEEEEccC
Confidence 34678899999999999876433 48899852 000 01246999999
Q ss_pred CCCCCEEEEEEEEeCCCC-cEEEEEEEEec-----CCEEEeCCCceEEEecCCcEEEEeeeecc-cCCeEEEEECCEEee
Q psy6361 59 AEKDTNVYTCTVSNAAGS-TSKTIQMNVLV-----PPFFKDEQQESVAIVVNHPMNISCSHYGV-PTPDFSWYKDGSLLR 131 (148)
Q Consensus 59 ~~~d~g~y~C~~~~~~~~-~~~~~~l~v~~-----~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~~~~W~~~g~~l~ 131 (148)
+.+|+|.|.|.+...... ......|.|.. +|.+-...+. + ..+.+.|.+.+. |...+.|.++|..+.
T Consensus 80 ~~~DsG~Y~Ca~~~~~~~~fG~GT~L~V~~~~~~~~P~V~~~~~~-----~-~~~tl~Cl~~gf~P~i~~~~~~~~~~~~ 153 (199)
T 3gsn_A 80 QPEDSATYLCARNTGNQFYFGTGTSLTVIPNIQNPDPAVYQLRDS-----K-SSDKSVCLFTDFDSQTNVSQSKDSDAYI 153 (199)
T ss_dssp CGGGCEEEEEEEESSSCEEECSCEEEEEECCCSSCCCEEEECCCS-----S-SSSSCCEEEETCCTTCCSSCSSCSSEEE
T ss_pred cccCCccEEEEEcccccccCCCCEEEEEecccCCCCCEEEEcccC-----C-CCceEEEEeecccCCeEeEeccCCCeEe
Confidence 999999999998642111 12234566653 1333222011 1 236788998875 444788999998876
Q ss_pred cC
Q psy6361 132 IQ 133 (148)
Q Consensus 132 ~~ 133 (148)
..
T Consensus 154 ~~ 155 (199)
T 3gsn_A 154 TD 155 (199)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 387
>3mbe_C I-AG7; T cell receptor, histocompatability antigen, MHC class II, I immune system; HET: NAG; 2.89A {Mus musculus}
Probab=99.00 E-value=3.6e-10 Score=72.51 Aligned_cols=113 Identities=8% Similarity=0.070 Sum_probs=73.9
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC---------E----------E------ecCCceEEEecCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL---------L----------Y------VTRNGSFVINNIAE 60 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~---------~----------~------~~~~~~l~i~~~~~ 60 (148)
....+..|+.+.|.|.+.+. .+ .+.||+.. . . ......|+|.+++.
T Consensus 9 ~~v~v~~G~sVtL~C~~s~~-~~--------~v~Wyrq~pg~~~~~l~~~~~~~~~~~Rfs~~~~~~~~~~sLtI~~lq~ 79 (229)
T 3mbe_C 9 PALSLYEGADSGLRCNFSTT-MK--------SVQWFQQNHRGRLITLFYLAQGTKENGRLKSTFNSKERYSTLHIKDAQL 79 (229)
T ss_dssp SEEEEETTCCEEEEEEESSC-CS--------CEEEEEECSSSCBCCCEEESSEEEEETTEEEEEETTTTEEEEEECSCCS
T ss_pred CEEEEEcCCCEEEEEEEeCC-Cc--------EEEEEEECCCCCcEEEEEeCCCCccCCCEEEEECCCCCEEEEEEECCcc
Confidence 34678899999999999877 33 48999852 0 0 01134699999999
Q ss_pred CCCEEEEEEEEeCC--CC--cEEEEEEEEecC-----CEEEeCCCceEEEecCCcEEEEeeeecc-cCCeEEEEECCEEe
Q psy6361 61 KDTNVYTCTVSNAA--GS--TSKTIQMNVLVP-----PFFKDEQQESVAIVVNHPMNISCSHYGV-PTPDFSWYKDGSLL 130 (148)
Q Consensus 61 ~d~g~y~C~~~~~~--~~--~~~~~~l~v~~~-----p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~~~~W~~~g~~l 130 (148)
+|+|.|+|.+.... .. ......|.|... |.+-.. ......+.+.|.+.+. |...+.|+++|..+
T Consensus 80 ~DSG~Y~Ca~~~~~~~~~~~fG~GT~L~V~~~~~~p~P~Vf~~------~~~~~~vtl~Cl~~gf~P~i~v~~~~~~~~~ 153 (229)
T 3mbe_C 80 EDSGTYFCAAEDGGSGNKLIFGTGTLLSVKPNIQNPEPAVYQL------KDPRSQDSTLCLFTDFDSQINVPKTMESGTF 153 (229)
T ss_dssp TTCBEEEEEEECSSSTTCEEECCCCEEEEECCCSSCCCEEEEE------ECTTCTTCEEEEEESCCSSSCCCCCCSSSEE
T ss_pred cCCCCEEEEEEeCCCcccceeCCCEEEEEecccCCCCCEEEEc------cCCCCCEEEEEEccccCCceEeEeeccCceE
Confidence 99999999987532 11 122345666532 221111 1112348899999875 55578899999877
Q ss_pred ecC
Q psy6361 131 RIQ 133 (148)
Q Consensus 131 ~~~ 133 (148)
...
T Consensus 154 ~~~ 156 (229)
T 3mbe_C 154 ITD 156 (229)
T ss_dssp ECC
T ss_pred ecC
Confidence 543
No 388
>3tjh_C 42F3 alpha; IG MHC, antigen recognition, TCR-PMHC, membrane receptor, IM system; 2.12A {Mus musculus} PDB: 3tpu_A 3tfk_C 1j8h_D* 1fyt_D* 4gkz_A* 3rev_A 1mwa_A* 1g6r_A* 1tcr_A* 2ckb_A 1zgl_M 3c5z_A 1i9e_A* 2oi9_B 2e7l_A 2icw_I 3e2h_B 3e3q_D 4h1l_G
Probab=99.00 E-value=8.4e-10 Score=70.66 Aligned_cols=115 Identities=14% Similarity=0.158 Sum_probs=72.7
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E-----------Eec------------CCceEEEecC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L-----------YVT------------RNGSFVINNI 58 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~-----------~~~------------~~~~l~i~~~ 58 (148)
...+..|+.+.|.|.+.+.... .+.||+.. . ... ....|.|.++
T Consensus 18 ~v~v~~G~sVtL~C~~s~~~~~--------~v~WyrQ~pg~~~~~Li~~~~~~~~~~~~~Rfs~s~~~~~~~~sLtI~~l 89 (226)
T 3tjh_C 18 RVTVSEGASLQLRCKYSYSATP--------YLFWYVQYPRQGLQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASV 89 (226)
T ss_dssp EEEEETTSCEEECCEEEESSCE--------EEEEEEECTTSCCEEEEEECSSSSEEECGGGEEEEEETTTTEEEEEESSC
T ss_pred EEEEEcCCCEEEEEEEecCCCC--------eEEEEEECCCCCcEEEEEecCCCccccccCcEEEEEcCCCCEEEEEEecC
Confidence 4568899999999999875433 58899852 0 001 1236999999
Q ss_pred CCCCCEEEEEEEEeC-C-CC--cEEEEEEEEecC-----CEEEeCCCceEEEecCCcEEEEeeeecc-cCCeEEEEECCE
Q psy6361 59 AEKDTNVYTCTVSNA-A-GS--TSKTIQMNVLVP-----PFFKDEQQESVAIVVNHPMNISCSHYGV-PTPDFSWYKDGS 128 (148)
Q Consensus 59 ~~~d~g~y~C~~~~~-~-~~--~~~~~~l~v~~~-----p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~~~~W~~~g~ 128 (148)
+.+|+|.|+|.+... . .. ......|.|... |.+-.. .. ....+.+.|.+.+. |...+.|+++|.
T Consensus 90 q~~DSG~YyCa~~~~~~~~~~~fG~GT~LtV~~~~~~~~P~V~~~-~~-----~~~~~tl~Cl~~~f~P~i~v~~~~~~~ 163 (226)
T 3tjh_C 90 HWSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPNIQNPDPAVYQL-RD-----SKSSDKSVCLFTDFDSQTNVSQSKDSD 163 (226)
T ss_dssp CGGGCEEEEEEEEESSCSSSEEECCCEEEEEECCCSSCCCEEEEE-EE-----CC---CEEEEEESCCTTCCCCCCSCTT
T ss_pred CcccCCCEEEEEEecCCccccccCCCeEEEEeCCCCCCCCEEEEc-cc-----CCCCeEEEEEcccccCCcEEEeeccCc
Confidence 999999999998753 1 11 112346666532 222111 00 11347899998775 545788999998
Q ss_pred EeecCCc
Q psy6361 129 LLRIQSH 135 (148)
Q Consensus 129 ~l~~~~~ 135 (148)
.+.....
T Consensus 164 ~~~~~~t 170 (226)
T 3tjh_C 164 VYITDKC 170 (226)
T ss_dssp EEECCCE
T ss_pred eeecCce
Confidence 8865443
No 389
>4ei6_A Valpha1 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_C 4elk_A 4elm_E* 3qeu_A 1ao7_D 3qdj_D 3qdg_D 3qfj_D 1qsf_D 1qse_D* 3d39_D* 3d3v_D* 3h9s_D 3pwp_D 2gj6_D 3utp_D* 3uts_D 1qrn_D 3hg1_D 3rdt_A ...
Probab=99.00 E-value=4e-10 Score=71.34 Aligned_cols=116 Identities=11% Similarity=0.103 Sum_probs=74.1
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E---------------E------ecCCceEEEecCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L---------------Y------VTRNGSFVINNIAE 60 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~---------------~------~~~~~~l~i~~~~~ 60 (148)
...+..|+.+.|.|.+.+.... .+.|||.. . . ......|.|.+++.
T Consensus 11 ~v~v~~G~sVtL~C~~s~~~~~--------~v~Wyrq~~g~~~~~li~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~lq~ 82 (208)
T 4ei6_A 11 SLSVPEGGMASLNCTSSDRNFQ--------YFWWYRQHSGEGPKALMSIFSDGDKKEGRFTAHLNKASLHVSLHIRDSQP 82 (208)
T ss_dssp EEEEETTCCEECEEEECCTTEE--------EEEEEEECTTSCCEEEEECCSSEEEEETTEEEEEBTTTTBC-CEECSCCG
T ss_pred EEEEECCCCEEEEEEEcCCCCc--------eEEEEEeCCCCCcEEEEEECCCCcccCCcEEEEEcCCCCEEEEEEEeCcc
Confidence 4668899999999999876433 58899852 0 0 01235799999999
Q ss_pred CCCEEEEEEEEeCC-----CCcEEEEEEEEecC-----CEEEeCCCceEEEecCCcEEEEeeeecc-cCCeEEEEECCEE
Q psy6361 61 KDTNVYTCTVSNAA-----GSTSKTIQMNVLVP-----PFFKDEQQESVAIVVNHPMNISCSHYGV-PTPDFSWYKDGSL 129 (148)
Q Consensus 61 ~d~g~y~C~~~~~~-----~~~~~~~~l~v~~~-----p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~~~~W~~~g~~ 129 (148)
+|+|.|.|.+.... ........|.|... |.+-.. . .....+.+.|.+.+. |...+.|.++|..
T Consensus 83 ~DsG~Y~Ca~~~~~~~~~~~~fG~GT~L~V~~~~~~~~PsVf~l-~-----~~~~~~tl~Cl~~~f~P~i~v~~~~~~~~ 156 (208)
T 4ei6_A 83 SDSALYFCAASEQNNYAQGLTFGLGTRVSVFPYIQNPDPAVYQL-R-----DSKSSDKSVCLFTDFDSQTNVSQSKDSDV 156 (208)
T ss_dssp GGCEEEEEEEEECCSSCCCCEECCCEEEEEECCCSSCCCEEEEE-E-----BSSCTTCEEEEEESCCTTCCCCCCSSTTC
T ss_pred cCCCcEEEEEecCCCccccccCCCCEEEEEeCcccCCCCEEEEc-c-----cCCCCceEEEEeeccCCceEeeecccCcE
Confidence 99999999987531 11223346666532 222111 0 011236788999876 4347889999888
Q ss_pred eecCCce
Q psy6361 130 LRIQSHY 136 (148)
Q Consensus 130 l~~~~~~ 136 (148)
+..+..+
T Consensus 157 ~~~~~~~ 163 (208)
T 4ei6_A 157 YITDKCV 163 (208)
T ss_dssp EECCCEE
T ss_pred EEeCCEE
Confidence 7665443
No 390
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.99 E-value=4.5e-10 Score=70.65 Aligned_cols=70 Identities=10% Similarity=0.044 Sum_probs=53.5
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-------EEec-----CCceEEEecCCCCCCEEEEEEEEeCCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-------LYVT-----RNGSFVINNIAEKDTNVYTCTVSNAAG 75 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-------~~~~-----~~~~l~i~~~~~~d~g~y~C~~~~~~~ 75 (148)
..+..++.+.+.|.+.+.|.| .++|++++ .... ....|.|.++..+|+|.|+|.|.|.++
T Consensus 128 ~~~~~~~~~~~~c~~~g~p~p--------~i~W~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g 199 (218)
T 4frw_A 128 LEEGQGLTLAASCTAEGSPAP--------SVTWDTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGL 199 (218)
T ss_dssp EETTCCSEEEEEEEEEEBSCC--------EEEEEESSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTC
T ss_pred eeeeeccccceeeeccCCcCc--------eEEEEECCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCC
Confidence 345567788999999998888 69999987 1111 123689999999999999999999998
Q ss_pred CcEEEEEEEE
Q psy6361 76 STSKTIQMNV 85 (148)
Q Consensus 76 ~~~~~~~l~v 85 (148)
.....+.+.+
T Consensus 200 ~~~~~~t~~v 209 (218)
T 4frw_A 200 LQDQRITHIL 209 (218)
T ss_dssp SSCEEEEEEC
T ss_pred CeEEEEEEEE
Confidence 7655554444
No 391
>2bnu_A TCR alpha chain, T-cell receptor alpha chain C region; superagonist peptide T-cell vaccines, transmembrane, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2bnq_D 2bnr_D 2f54_D 2pyf_A* 2pye_D* 2f53_D 2p5e_D* 2p5w_D* 3mv7_D 3mv8_D 3mv9_D 3utt_D 2cdg_A
Probab=98.99 E-value=5.3e-10 Score=70.64 Aligned_cols=102 Identities=8% Similarity=0.084 Sum_probs=67.9
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E----------------E-e-----cCCceEEEecC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L----------------Y-V-----TRNGSFVINNI 58 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~----------------~-~-----~~~~~l~i~~~ 58 (148)
....+..|+.+.|.|.+.+...+ .+.||+.. . . . .....|.|.++
T Consensus 8 ~~v~v~~G~~v~L~C~~s~~~~~--------~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 79 (203)
T 2bnu_A 8 AALSVPEGENLVLNCSFTDSAIY--------NLQWFRQDPGKGLTSLLLIQSSQREQTSGRLNASLDKSSGRSTLYIAAS 79 (203)
T ss_dssp SEEEEETTCCEEEEEEESCCCEE--------EEEEEEECTTSCEEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSC
T ss_pred CEEEEeCCCCEEEEEEECCCCcc--------eEEEEEeCCCCCcEEEEEECCCCccccCCCeEEEEcCCCCEEEEEEeeC
Confidence 45678999999999999776543 58998842 0 0 0 11247999999
Q ss_pred CCCCCEEEEEEEEeCC---CC--cEEEEEEEEecC-----CEEEeCCCceEEEecCCcEEEEeeeec-ccCCeE
Q psy6361 59 AEKDTNVYTCTVSNAA---GS--TSKTIQMNVLVP-----PFFKDEQQESVAIVVNHPMNISCSHYG-VPTPDF 121 (148)
Q Consensus 59 ~~~d~g~y~C~~~~~~---~~--~~~~~~l~v~~~-----p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~~~ 121 (148)
+.+|+|.|.|.+.+.. .. ......|.|... |.+... .. ....+.|.|.+.| .|.|.+
T Consensus 80 ~~~Dsg~Y~C~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~-~~-----~~~~~~L~C~~~g~~P~p~v 147 (203)
T 2bnu_A 80 QPGDSATYLCAVRPTSGGSYIPTFGRGTSLIVHPYIQNPDPAVYQL-RR-----SKSSDKSVCLFTDFDSQTNV 147 (203)
T ss_dssp CGGGCEEEEEEEEECSSSTTCCEECCCEEEEEECCCSSCCCEEEEE-CC-----SSSSSCEEEEEESCCTTCCC
T ss_pred CcccCeEEEEEEEcCcCcceeeeeCCCEEEEEeCCCCCCCCeEEec-CC-----CCCCcEEEEEccccccCccc
Confidence 9999999999998742 11 112346666532 333222 11 1246899999988 688866
No 392
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=98.99 E-value=3.2e-09 Score=65.34 Aligned_cols=69 Identities=9% Similarity=0.146 Sum_probs=54.1
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEec----CCceEEEecCCCCCCEEEEEEEEeCCCCcE-EEEE
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVT----RNGSFVINNIAEKDTNVYTCTVSNAAGSTS-KTIQ 82 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~-~~~~ 82 (148)
..+..|+.+.|.|.+.+.|.|. .+.|++++.... ....|.|.++ +|+|.|+|.+.|..|... ..+.
T Consensus 108 ~~~~~g~~~~l~C~~~g~p~p~-------~v~W~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~ 178 (182)
T 1rhf_A 108 LAVPPNAPFQLSCEAVGPPEPV-------TIVWWRGTTKIGGPAPSPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTAT 178 (182)
T ss_dssp EEECTTCCEEEEEEEECSSSCC-------EEEEEETTEECSCSEESSEEEEECCC--SSCEEEEEEEEETTEEEECCCEE
T ss_pred eEecCCCEEEEEeEecCCCCCC-------EEEEEcCCeECCCCCCCceEEEEecc--ccCeEEEEEEECCCCCcccceEE
Confidence 4678899999999999988874 599999983332 4567888887 689999999999988643 3555
Q ss_pred EEE
Q psy6361 83 MNV 85 (148)
Q Consensus 83 l~v 85 (148)
|.|
T Consensus 179 l~V 181 (182)
T 1rhf_A 179 VHL 181 (182)
T ss_dssp EEE
T ss_pred EEe
Confidence 554
No 393
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=98.98 E-value=7.5e-10 Score=62.70 Aligned_cols=57 Identities=11% Similarity=0.115 Sum_probs=45.4
Q ss_pred eEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe--------cCCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 9 QAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV--------TRNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 9 ~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~--------~~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
.+..|++|+|.|...+.+ + .+.|+|++... .....|.|.+++.+|+|.|.|.+.+..
T Consensus 15 ~v~~G~~VtL~C~~~~~~-~--------~~~w~k~g~~~~~~~~~~~~~~~~l~I~~v~~~dsG~Y~C~~~n~~ 79 (105)
T 2vsd_A 15 GVSLGDTVTLRCHLPRMA-A--------WVQLWLNGTLRFDKEKDKEQDAAEFSFAVTNLEDAGTYQCRYQVSE 79 (105)
T ss_dssp SCCTTCEEEEEEECCSSC-E--------EEEEEETTEEEEEEEECTTCSEEEEEEECCSGGGCEEEEEEEEEET
T ss_pred CcCcCCCEEEEEEcCCCC-c--------EEEEEECCccceeeeccCCCCEEEEEECCCCHHHCeEEEEEEEcCC
Confidence 577899999999987643 2 68999998321 234579999999999999999998853
No 394
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.98 E-value=2.8e-09 Score=66.70 Aligned_cols=59 Identities=7% Similarity=-0.001 Sum_probs=46.7
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe----------c---CCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV----------T---RNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~----------~---~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
..+..|+.+.|.|.+.+. .| .+.|+|++... . ....|.|.+++.+|+|.|+|.+.|..
T Consensus 110 ~~v~~G~~v~L~C~~~~~-~~--------~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 180 (198)
T 1ugn_A 110 PVVNSGGNVTLQCDSQVA-FD--------GFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSN 180 (198)
T ss_dssp SEEETTCCEEEEEECSSC-CS--------EEEEEEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTT
T ss_pred cccCCCCcEEEEEecCCC-Cc--------EEEEEECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCC
Confidence 457789999999999887 44 69999997211 1 13689999999999999999999976
Q ss_pred C
Q psy6361 75 G 75 (148)
Q Consensus 75 ~ 75 (148)
+
T Consensus 181 ~ 181 (198)
T 1ugn_A 181 S 181 (198)
T ss_dssp S
T ss_pred C
Confidence 5
No 395
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.97 E-value=2e-09 Score=68.62 Aligned_cols=71 Identities=11% Similarity=0.046 Sum_probs=52.3
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE-------EecCCceEEEecCCCCCCEEEEEEEEeCCC-----
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL-------YVTRNGSFVINNIAEKDTNVYTCTVSNAAG----- 75 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~-------~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~----- 75 (148)
..+..|+.+.|.|...+.+.| .+.|+|++. .......|.|.+++.+|+|.|+|.+.+...
T Consensus 115 ~~v~~G~~v~L~C~~~~~~~~--------~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s 186 (218)
T 1uct_A 115 LVLMPGENISLTCSSAHIPFD--------RFSLAKEGELSLPQHQSGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWS 186 (218)
T ss_dssp SEECTTCCCEEEEECSSSCCS--------EEEEEETTCSSCCSEEECSSSEEEECCSCCGGGCEEEEEEEECTTSTTEEC
T ss_pred CccCCCCCEEEEEeCCCCCCC--------EEEEEECCCcccccccCCCccCEEEEccCCcccCEEEEEEEEcCCCCCcCC
Confidence 356789999999966555555 699999972 223467899999999999999999997532
Q ss_pred CcEEEEEEEEe
Q psy6361 76 STSKTIQMNVL 86 (148)
Q Consensus 76 ~~~~~~~l~v~ 86 (148)
..+..+.|.|.
T Consensus 187 ~~S~~~~l~V~ 197 (218)
T 1uct_A 187 FPSNALELVVT 197 (218)
T ss_dssp CCCCCEEEEEC
T ss_pred CCCCcEEEEEe
Confidence 13344555555
No 396
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.97 E-value=1.1e-09 Score=62.39 Aligned_cols=60 Identities=12% Similarity=0.174 Sum_probs=46.6
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EEe--------------------cCCceEEEecCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LYV--------------------TRNGSFVINNIAE 60 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~~--------------------~~~~~l~i~~~~~ 60 (148)
....+..|+++.|.|.+.+.+.+ .+.|++.. ... .....|.|.+++.
T Consensus 11 ~~~~v~~G~~v~L~C~~~~~~~~--------~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~ 82 (109)
T 2q20_A 11 SSLSASVGDRVTITCQASQDISN--------YLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQP 82 (109)
T ss_dssp SEEEECTTCCEEEEEEESSCCTT--------CEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred CEEEecCCCcEEEEEeeccCCCC--------cEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCCEEEEEECCCCh
Confidence 35678899999999999887655 59999853 100 1123799999999
Q ss_pred CCCEEEEEEEEeC
Q psy6361 61 KDTNVYTCTVSNA 73 (148)
Q Consensus 61 ~d~g~y~C~~~~~ 73 (148)
+|+|.|.|.+.+.
T Consensus 83 ~DsG~Y~C~~~~~ 95 (109)
T 2q20_A 83 EDIATYYCQQYDN 95 (109)
T ss_dssp GGCEEEEEEECSS
T ss_pred hhCEEEEEEEeeC
Confidence 9999999999764
No 397
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.97 E-value=1.7e-09 Score=60.69 Aligned_cols=46 Identities=24% Similarity=0.561 Sum_probs=40.7
Q ss_pred CCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCC
Q psy6361 88 PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQS 134 (148)
Q Consensus 88 ~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~ 134 (148)
+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+|||..+....
T Consensus 5 PP~i~~~-p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~ 50 (100)
T 3knb_A 5 PPKIEAL-PSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQE 50 (100)
T ss_dssp EEEECCC-CSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTG
T ss_pred CCEEEeC-CCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeec
Confidence 5777766 788899999999999999999999999999999987544
No 398
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=98.95 E-value=6.2e-09 Score=74.94 Aligned_cols=117 Identities=15% Similarity=0.125 Sum_probs=76.3
Q ss_pred EeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe----------cCC------ceEEEecCCCCCCEEEEEEEEeC
Q psy6361 10 AMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV----------TRN------GSFVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 10 ~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~----------~~~------~~l~i~~~~~~d~g~y~C~~~~~ 73 (148)
...+....|.|.+.+..++. ..+.|+|++++... ..+ ..|.|......|.+.|+|.+.+.
T Consensus 355 ~~~~~~~~l~C~~~~~~p~~----~~i~v~W~~~~~~~~~~~t~~~~~~~n~~~~~~s~L~i~~~~~~~~~~y~C~v~~~ 430 (551)
T 1ntl_A 355 LTITLTPKVTCVVVDISKDD----PEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSA 430 (551)
T ss_pred eeeccCcceEEEEEecccCC----CceEEEEEECCccccccccCCceECCCCeEEEEEeeEcCHHHccCCceEEEEEecC
Confidence 44567788999998876540 01279999987111 111 23555555566788999999987
Q ss_pred CCC--cEEEEEEEE--ecCCEEEeCCCceEEEecCCcEEEEeeeecc-cC-CeEEEEECCEEee
Q psy6361 74 AGS--TSKTIQMNV--LVPPFFKDEQQESVAIVVNHPMNISCSHYGV-PT-PDFSWYKDGSLLR 131 (148)
Q Consensus 74 ~~~--~~~~~~l~v--~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-~~~~W~~~g~~l~ 131 (148)
... ....+.+.+ ..+|.+... +.......|+.+.|.|.+.|. |. ..++|+|||+.+.
T Consensus 431 ~~~~~~~~~~~~~~~~~~~P~V~~~-~~~~~~~~~~~~~L~C~v~gfyP~~i~v~W~k~g~~~~ 493 (551)
T 1ntl_A 431 AFPAPIEKTISKTKGRPKAPQLYTI-PPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAE 493 (551)
T ss_pred CCCCCeEEEEecCCCCCcCCceEEe-CCChhhccCCceEEEEEEEEeECCCCEEEEEECCEEcc
Confidence 653 233333333 356776554 333345568899999999884 43 4899999999874
No 399
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.95 E-value=1.9e-09 Score=67.07 Aligned_cols=57 Identities=14% Similarity=0.208 Sum_probs=45.7
Q ss_pred eEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE-------EecCCceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 9 QAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL-------YVTRNGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 9 ~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~-------~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
.+..|+.+.|.|.+.+. .+ .+.|+|++. .......|.|.+++.+|+|.|+|.+.|..
T Consensus 109 ~v~~G~~v~L~C~~~~~-~~--------~~~w~k~g~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 109 EVISGEKVTFYCRLDTA-TS--------MFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp EEETTCEEEEEEECSSS-CS--------EEEEEEESSSCEEEEEECSSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred ccccCCEEEEEEEcCCC-CC--------EEEEEECCccccccccCCCceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 46789999999997653 33 699999871 22345789999999999999999998754
No 400
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.94 E-value=5.6e-10 Score=70.02 Aligned_cols=62 Identities=18% Similarity=0.313 Sum_probs=51.2
Q ss_pred eeEeeeccceeeeee-cccCCCCcCCCCccEEEEeeCCEEe------------------cCCceEEEecCCCCCCEEEEE
Q psy6361 8 EQAMLLDLIPMHSRY-NYTNLPQSRNPGQVIKRYLKDLLYV------------------TRNGSFVINNIAEKDTNVYTC 68 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~-~~~~~p~~~~~~~~~v~W~~~~~~~------------------~~~~~l~i~~~~~~d~g~y~C 68 (148)
..+..|+.+.|.|.+ .+.|.| .+.|++++... .....|.|.++..+|+|.|+|
T Consensus 117 ~~~~~g~~~~l~C~~~~~~p~~--------~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 188 (209)
T 1nbq_A 117 SSATIGNRAVLTCSEQDGSPPS--------EYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSC 188 (209)
T ss_dssp SEEETTSCEEECCCCCSCBSCC--------EEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEE
T ss_pred cceecCCEEEEEEeCCCCCCCc--------eeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEE
Confidence 357889999999997 777777 69999987211 135689999999999999999
Q ss_pred EEEeCCCCc
Q psy6361 69 TVSNAAGST 77 (148)
Q Consensus 69 ~~~~~~~~~ 77 (148)
.+.|..+..
T Consensus 189 ~a~n~~g~~ 197 (209)
T 1nbq_A 189 EARNGYGTP 197 (209)
T ss_dssp EEECSSSCC
T ss_pred EEeCCcCcc
Confidence 999998876
No 401
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=98.94 E-value=2.4e-09 Score=61.00 Aligned_cols=77 Identities=14% Similarity=0.216 Sum_probs=52.4
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC--E-------------------Ee-----cCCceEEEecCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL--L-------------------YV-----TRNGSFVINNIA 59 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~--~-------------------~~-----~~~~~l~i~~~~ 59 (148)
....+..|++++|.|.+....... .+.|++.. . .. .....|.|.+++
T Consensus 4 ~~v~~~~G~~v~L~C~~~~~~~~~-------~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 76 (110)
T 2q87_A 4 RTVAGPVGGSLSVQCPYEKEHRTL-------NKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLT 76 (110)
T ss_dssp EEEEECTTSCEEEEEECCGGGTTS-------EEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCC
T ss_pred cEEEEeCCCcEEEEeEecCCcCCc-------eEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCC
Confidence 456789999999999987754322 69999863 0 00 012479999999
Q ss_pred CCCCEEEEEEEEeCC-C-CcEEEEEEEEecCC
Q psy6361 60 EKDTNVYTCTVSNAA-G-STSKTIQMNVLVPP 89 (148)
Q Consensus 60 ~~d~g~y~C~~~~~~-~-~~~~~~~l~v~~~p 89 (148)
.+|+|.|.|.+.+.. + .......+.|.+.|
T Consensus 77 ~~DsG~Y~C~~~~~~~g~~~~~~~~v~v~V~p 108 (110)
T 2q87_A 77 EEDAGTYWCGVDTPWLQDFHDPVVEVEVSVFP 108 (110)
T ss_dssp GGGCEEEEEEEECTTSCCBCCCSEEEEEEEC-
T ss_pred HHHCEEEEEEEecCccCccCCccEEEEEEEec
Confidence 999999999998875 3 12233445554443
No 402
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=98.94 E-value=2.2e-09 Score=67.19 Aligned_cols=70 Identities=9% Similarity=0.015 Sum_probs=53.8
Q ss_pred eEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC------EEecCC---ceEEEecCCCCCCEEEEEEEEeCCCCcEE
Q psy6361 9 QAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL------LYVTRN---GSFVINNIAEKDTNVYTCTVSNAAGSTSK 79 (148)
Q Consensus 9 ~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~------~~~~~~---~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 79 (148)
.+..|+.+.|.|.+.+.|.| .+.|++++ ...... ..+.+..+..+|+|.|+|.+.|..+....
T Consensus 114 ~~~~g~~v~l~C~~~g~P~p--------~v~W~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~ 185 (202)
T 3bp6_B 114 EVPGTGEVQLTCQARGYPLA--------EVSWQNVSVPANTSHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELT 185 (202)
T ss_dssp ECTTTCCEEEEEEEEEBSCC--------EEEETTCCSCCEEEEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEE
T ss_pred ecCCCCeEEEEEEccccCCc--------eEEEEeCCCCccCceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCccccc
Confidence 45678999999999988877 69999986 111122 34567788999999999999999998777
Q ss_pred EEEEEEe
Q psy6361 80 TIQMNVL 86 (148)
Q Consensus 80 ~~~l~v~ 86 (148)
.+.|.|.
T Consensus 186 ~~~l~v~ 192 (202)
T 3bp6_B 186 SAIIDPL 192 (202)
T ss_dssp EEEECC-
T ss_pred EEEEEec
Confidence 7666654
No 403
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=98.94 E-value=2.1e-09 Score=60.32 Aligned_cols=51 Identities=18% Similarity=0.240 Sum_probs=44.0
Q ss_pred cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceEE
Q psy6361 87 VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYIT 138 (148)
Q Consensus 87 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~~ 138 (148)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+|+|..+....++..
T Consensus 7 ~~P~~~~~-~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~ 57 (103)
T 3qp3_A 7 HAPRITLR-MRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHY 57 (103)
T ss_dssp EEEEEEEC-CCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEE
T ss_pred CCCEEEeC-CcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEE
Confidence 46777777 7788999999999999999999999999999999987666543
No 404
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.93 E-value=4.5e-10 Score=70.91 Aligned_cols=65 Identities=3% Similarity=0.036 Sum_probs=50.7
Q ss_pred eeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe----------cCCceEEEecC-CCCCCEEEEEEEEeCCCC-cE
Q psy6361 11 MLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV----------TRNGSFVINNI-AEKDTNVYTCTVSNAAGS-TS 78 (148)
Q Consensus 11 ~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~----------~~~~~l~i~~~-~~~d~g~y~C~~~~~~~~-~~ 78 (148)
..|+.+.|.|. +.|.| .+.|+|++... .....|.|.++ ..+|+|.|+|.+.|..+. .+
T Consensus 126 ~~G~~v~L~C~--g~p~p--------~i~W~k~~~~l~~~~~~~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s 195 (204)
T 1sy6_A 126 ISGTTVILTCP--QYPGS--------EILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDAN 195 (204)
T ss_dssp EETTEEEEECS--CCCSS--------CEEEEETTEEESCCTTCTTEEEETTEEEETTCCHHHHCEEEEEEETTSCGGGSS
T ss_pred ecCCcEEEEcC--CCCCC--------ceEEEECCEECCCccCCceEecCCCEEEEeeCCccccCEEEEEEeccCCCCcee
Confidence 38999999999 56666 59999998322 13568999999 999999999999998886 34
Q ss_pred EEEEEEE
Q psy6361 79 KTIQMNV 85 (148)
Q Consensus 79 ~~~~l~v 85 (148)
..+.|.+
T Consensus 196 ~~l~l~~ 202 (204)
T 1sy6_A 196 FYLYLRA 202 (204)
T ss_dssp CEEEEEE
T ss_pred EEEEEEE
Confidence 5555543
No 405
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=98.93 E-value=1.6e-09 Score=62.76 Aligned_cols=60 Identities=18% Similarity=0.203 Sum_probs=46.5
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EE--------------------ecCCceEEEecCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LY--------------------VTRNGSFVINNIAE 60 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~--------------------~~~~~~l~i~~~~~ 60 (148)
....+..|+++.|.|.+.+.+.+ .+.|++.. .. ......|.|.+++.
T Consensus 11 ~~v~v~~G~~vtL~C~~~~~~~~--------~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~ 82 (119)
T 2e27_L 11 SSLSASLGGKVTITCKANQDIKK--------KIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSGRDYSFSISNLEP 82 (119)
T ss_dssp SEEEEETTCCEEEEEEESSCCTT--------CEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCG
T ss_pred CeEEEeCCCCEEEEEEeCCCCCc--------eEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccCCEEEEEECCCCh
Confidence 34678999999999999887655 59999852 10 01124799999999
Q ss_pred CCCEEEEEEEEeC
Q psy6361 61 KDTNVYTCTVSNA 73 (148)
Q Consensus 61 ~d~g~y~C~~~~~ 73 (148)
+|+|.|.|.+.+.
T Consensus 83 ~DsG~Y~C~~~~~ 95 (119)
T 2e27_L 83 EDAATYYCLQYDN 95 (119)
T ss_dssp GGCEEEEEEECGG
T ss_pred HHCEEEEEEEccC
Confidence 9999999998764
No 406
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.93 E-value=8e-09 Score=61.02 Aligned_cols=76 Identities=14% Similarity=0.192 Sum_probs=54.2
Q ss_pred eeeeEeeeccceeeeeeccc-CCCCcCCCCccEEEEeeCC-----E-Eec-------------------CCceEEEecCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYT-NLPQSRNPGQVIKRYLKDL-----L-YVT-------------------RNGSFVINNIA 59 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~-~~p~~~~~~~~~v~W~~~~-----~-~~~-------------------~~~~l~i~~~~ 59 (148)
....+..|+.+.|.|.+.+. +.+ .+.|||++ . ... ....|.|.+++
T Consensus 16 ~~~~v~~G~~v~L~C~~~~~~~~~--------~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~ 87 (136)
T 2d9c_A 16 KSVSVAAGESATLRCAMTSLIPVG--------PIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNIT 87 (136)
T ss_dssp SEEEEETTSCEEECCEESCCCSCC--------CCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCC
T ss_pred cEEEEcCCCCEEEEEEEcCCCCCc--------eEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCC
Confidence 45778999999999999875 233 58999974 0 000 13579999999
Q ss_pred CCCCEEEEEEEEeCCC--Cc----EEEEEEEEecCC
Q psy6361 60 EKDTNVYTCTVSNAAG--ST----SKTIQMNVLVPP 89 (148)
Q Consensus 60 ~~d~g~y~C~~~~~~~--~~----~~~~~l~v~~~p 89 (148)
.+|+|.|.|.+.+... .. ...+.|.|...|
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~g~~t~L~V~~~~ 123 (136)
T 2d9c_A 88 PADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKP 123 (136)
T ss_dssp TTTCEEEEEEEEECCSSSCEEEEECCCEEEEEECCC
T ss_pred HHHCEEEEEEEEeCCCCcccceeeCCCeEEEEEeCC
Confidence 9999999999987543 11 134677776544
No 407
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=98.93 E-value=1.1e-09 Score=62.18 Aligned_cols=60 Identities=12% Similarity=0.073 Sum_probs=46.4
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EE--------------------ecCCceEEEecCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LY--------------------VTRNGSFVINNIAE 60 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~--------------------~~~~~~l~i~~~~~ 60 (148)
....+..|+++.|.|.+.+.+.+ .+.|++.. .. ......|.|.+++.
T Consensus 9 ~~~~~~~G~~v~L~C~~~~~~~~--------~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 80 (107)
T 1i8k_A 9 ASLSVATGEKVTIRCMTSTDIDD--------DMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLS 80 (107)
T ss_dssp SEEECCTTCCEEEEEEESSCCTT--------CEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCG
T ss_pred CeEEecCCCCEEEEEEECCCCCC--------cEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCH
Confidence 45678899999999999877655 59999852 10 01123799999999
Q ss_pred CCCEEEEEEEEeC
Q psy6361 61 KDTNVYTCTVSNA 73 (148)
Q Consensus 61 ~d~g~y~C~~~~~ 73 (148)
+|+|.|.|.+.+.
T Consensus 81 ~DsG~Y~C~~~~~ 93 (107)
T 1i8k_A 81 EDVGDYYCLQSFN 93 (107)
T ss_dssp GGCEEEEEEECSS
T ss_pred HHCEEEEEEEeeC
Confidence 9999999998764
No 408
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=98.92 E-value=2e-09 Score=62.43 Aligned_cols=73 Identities=11% Similarity=0.129 Sum_probs=52.3
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EE--------------------ecCCceEEEecCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LY--------------------VTRNGSFVINNIAE 60 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~--------------------~~~~~~l~i~~~~~ 60 (148)
....+..|+.+.|.|.+.+.+.+ .+.|||.. .. ......|.|.+++.
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~--------~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~ 80 (120)
T 1mqk_L 9 VSLSASVGETVTITCRASENIYS--------YLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFSLKINSLLP 80 (120)
T ss_dssp SEEEECTTCCEEEEEEESSCCTT--------CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred CeEEEcCCCcEEEEEEeCCCCCc--------eEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccCCEEEEEECCCCH
Confidence 45678999999999999887655 59999842 10 01124699999999
Q ss_pred CCCEEEEEEEEeCC-C-CcEEEEEEEEe
Q psy6361 61 KDTNVYTCTVSNAA-G-STSKTIQMNVL 86 (148)
Q Consensus 61 ~d~g~y~C~~~~~~-~-~~~~~~~l~v~ 86 (148)
+|+|.|.|.+.+.. . .......|.|.
T Consensus 81 ~DsG~Y~C~~~~~~~~~~fg~gt~L~V~ 108 (120)
T 1mqk_L 81 EDFGSYYCQHHYGTPPLTFGGGTKLEIK 108 (120)
T ss_dssp GGCEEEEEEECSSSSSCCBCCCEEEEEC
T ss_pred HHCEEEEEEEEeCCCceEECCCeEEEEe
Confidence 99999999998753 2 22334455554
No 409
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=98.92 E-value=2.6e-09 Score=66.73 Aligned_cols=59 Identities=5% Similarity=-0.084 Sum_probs=40.4
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe----------cC---CceEEEecCCCCCCEEEEEEEEeCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV----------TR---NGSFVINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~----------~~---~~~l~i~~~~~~d~g~y~C~~~~~~ 74 (148)
..+..|+.+.|.|.+.+.+ | .+.|+|++... .. ...|.|.+++.+|+|.|+|.+.|..
T Consensus 109 ~~v~~G~~v~L~C~~~~~p-~--------~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 179 (196)
T 2d3v_A 109 PVVTSGENVTLQCGSRLRF-D--------RFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRH 179 (196)
T ss_dssp --------CEEEEEESSCC-S--------EEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETT
T ss_pred ccccCCCcEEEEEEcCCCC-C--------EEEEEccCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccC
Confidence 3577899999999998887 5 69999997211 11 2689999999999999999999865
Q ss_pred C
Q psy6361 75 G 75 (148)
Q Consensus 75 ~ 75 (148)
+
T Consensus 180 ~ 180 (196)
T 2d3v_A 180 I 180 (196)
T ss_dssp E
T ss_pred C
Confidence 3
No 410
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=98.91 E-value=1e-08 Score=56.94 Aligned_cols=50 Identities=18% Similarity=0.363 Sum_probs=43.0
Q ss_pred cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceE
Q psy6361 87 VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYI 137 (148)
Q Consensus 87 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~ 137 (148)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+++|..+....++.
T Consensus 4 ~~P~~~~~-~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~ 53 (99)
T 1g1c_A 4 EAPKIFER-IQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIY 53 (99)
T ss_dssp EEEEEEEC-CCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEE
T ss_pred CCCceEec-CcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEE
Confidence 35777777 778889999999999999999999999999999998766554
No 411
>1lp9_E T-cell receptor alpha chain; immunoregulatory complex, class I MHC:TCR CO-crystal, immune; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 2j8u_E 2jcc_E 2uwe_E 1nfd_A*
Probab=98.91 E-value=1.9e-09 Score=67.66 Aligned_cols=102 Identities=10% Similarity=0.065 Sum_probs=66.6
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E-E----------------e-----cCCceEEEecC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L-Y----------------V-----TRNGSFVINNI 58 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~-~----------------~-----~~~~~l~i~~~ 58 (148)
....+..|+.+.|.|.+.+...+ .+.||+.. . . . .....|.|.++
T Consensus 9 ~~v~v~~G~~v~L~C~~s~~~~~--------~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~ 80 (194)
T 1lp9_E 9 GLVTLTEGLPVMLNCTYQSTYSP--------FLFWYVQHLNEAPKLLLKSFTDNKRPEHQGFHATLHKSSSSFHLQKSSA 80 (194)
T ss_dssp SEEEEETTSCEEECEEEECSSSC--------CEEEEEECTTSCCEEEEESCSSTTCCCCSSCEECCBGGGTBCCEEESSC
T ss_pred CEEEEecCCCEEEEEEeCCCCCc--------eEEEEEeCCCCCeEEEEEEcCCCCcccCCCeEEEecCCCCEEEEEEccc
Confidence 45678999999999999876544 48998853 1 0 0 01247999999
Q ss_pred CCCCCEEEEEEEEeCC---CC--cEEEEEEEEecC-----CEEEeCCCceEEEecCCcEEEEeeeec-ccCCeE
Q psy6361 59 AEKDTNVYTCTVSNAA---GS--TSKTIQMNVLVP-----PFFKDEQQESVAIVVNHPMNISCSHYG-VPTPDF 121 (148)
Q Consensus 59 ~~~d~g~y~C~~~~~~---~~--~~~~~~l~v~~~-----p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~~~ 121 (148)
+.+|+|.|.|.+.+.. .. ......|.|... |.+... . .....+.|.|.+.| .|.+.+
T Consensus 81 ~~~Dsg~Y~C~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~-~-----~~~~~~tL~Cl~~gf~P~~~V 148 (194)
T 1lp9_E 81 QLSDSALYYCALFLASSSFSKLVFGQGTSLSVVPNIQNPEPAVYQL-K-----DPRSQDSTLCLFTDFDSQINV 148 (194)
T ss_dssp CGGGCEEEEEEEEECSSSSCEEEECCCEEEEEECCCSSCCCEEEEE-E-----CTTSSSCEEEEEESCCTTSCC
T ss_pred CcccCeeEEEEEecccCCcceeeeccCceEEecCcCCCCCCeeEec-C-----CCCCCcEEEEEeecccCCccc
Confidence 9999999999988631 11 112346666532 222211 0 11236899999988 577766
No 412
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=98.91 E-value=2.8e-09 Score=78.90 Aligned_cols=109 Identities=13% Similarity=0.115 Sum_probs=74.0
Q ss_pred ccceeeeeecccCCCCcCCCCccEEEEeeCCEEecC--CceEEEecCCCCC-CEEEEEEEEeCCCCcEE-EEEEEEe---
Q psy6361 14 DLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTR--NGSFVINNIAEKD-TNVYTCTVSNAAGSTSK-TIQMNVL--- 86 (148)
Q Consensus 14 ~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~~~--~~~l~i~~~~~~d-~g~y~C~~~~~~~~~~~-~~~l~v~--- 86 (148)
..+.+.|.+.+.|.| .+.|.|+|..... ...+.|..+...+ ++.|.|.+.+..|.... .+.+...
T Consensus 92 g~l~v~c~~~g~P~p--------~i~W~k~g~~~~~~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~ 163 (731)
T 2v5y_A 92 GLLNVYVKVNNGPLG--------NPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCT 163 (731)
T ss_dssp EEEEEEEEETTCCCC--------SEEEEECCCCCSSCEEEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCS
T ss_pred ceEEEEEecCCCCcc--------ceeEEEeCCcCCceeEEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeecccc
Confidence 367899999999988 4999999732221 2234454432333 47888877776664221 1122111
Q ss_pred cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEE-EE--ECCEEeec
Q psy6361 87 VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFS-WY--KDGSLLRI 132 (148)
Q Consensus 87 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~-W~--~~g~~l~~ 132 (148)
.+|.+. . +....+.+|+.+.|.|.+.|.|.|.+. |+ +||..+..
T Consensus 164 ~~p~~~-~-~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~ 210 (731)
T 2v5y_A 164 RTPHFL-R-IQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPL 210 (731)
T ss_dssp SSCEEC-C-CCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEE
T ss_pred cccccc-c-ccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccc
Confidence 457776 4 567889999999999999999999887 88 68877754
No 413
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=98.91 E-value=9e-10 Score=62.61 Aligned_cols=60 Identities=8% Similarity=0.139 Sum_probs=46.3
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EEe--------------------cCCceEEEecCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LYV--------------------TRNGSFVINNIAE 60 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~~--------------------~~~~~l~i~~~~~ 60 (148)
....+..|+++.|.|.+.+.+.+ .+.|++.. ... .....|.|.++..
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~--------~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 80 (108)
T 1qfw_M 9 KSMSMSVGERVTLSCKASETVDS--------FVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSATDFTLTISSVQA 80 (108)
T ss_dssp SCEECCTTCCEEEEEEESSCCCS--------CEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCSSEEEEEESSCCT
T ss_pred CeEEEcCCCCEEEEeeeCCCCCc--------EEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCCCEEEEEECCCCh
Confidence 34678899999999999877654 59999852 110 0123799999999
Q ss_pred CCCEEEEEEEEeC
Q psy6361 61 KDTNVYTCTVSNA 73 (148)
Q Consensus 61 ~d~g~y~C~~~~~ 73 (148)
+|+|.|.|.+.+.
T Consensus 81 ~DsG~Y~C~~~~~ 93 (108)
T 1qfw_M 81 EDFADYHCGQTYN 93 (108)
T ss_dssp TCCSEEEEEECSS
T ss_pred hhCEEEEEEEccC
Confidence 9999999998875
No 414
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=98.90 E-value=1.8e-09 Score=67.50 Aligned_cols=58 Identities=9% Similarity=0.059 Sum_probs=46.7
Q ss_pred eEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE------------EecCCceEEEecCCCCCCEEEEEEEEeCCC
Q psy6361 9 QAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL------------YVTRNGSFVINNIAEKDTNVYTCTVSNAAG 75 (148)
Q Consensus 9 ~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~------------~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 75 (148)
.+..|+.+.|.|.+.+.+ + .+.|+|++. .......|.|.+++.+|+|.|+|.+.|..+
T Consensus 110 ~v~~G~~v~L~C~~~~~~-~--------~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 110 LVTSGKSVTLLCQSRSPM-D--------TFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EECTTCCEEEEEEEEEEE-E--------EEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred eecCCCeEEEEEecCCCC-C--------EEEEEeCCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 467899999999988743 3 699999871 122356799999999999999999999765
No 415
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.90 E-value=9.4e-09 Score=65.52 Aligned_cols=74 Identities=11% Similarity=0.024 Sum_probs=51.2
Q ss_pred eeeeEeeeccceeeeeeccc-CCCCcCCCCccEEEEeeCC----------EEecCCc---eEEEecCCCCCCEEEEEEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYT-NLPQSRNPGQVIKRYLKDL----------LYVTRNG---SFVINNIAEKDTNVYTCTVS 71 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~-~~p~~~~~~~~~v~W~~~~----------~~~~~~~---~l~i~~~~~~d~g~y~C~~~ 71 (148)
....+..|+.+.+.|.+.+. |.| .++|++++ ....... .+.+..++.+|+|.|+|.+.
T Consensus 126 ~~~~~~~g~~v~l~c~~~g~~P~p--------~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~ 197 (226)
T 4f80_A 126 VDVKGYKDGGIHLECRSTGWYPQP--------QIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIR 197 (226)
T ss_dssp EEEEEEETTEEEEEEEEEEEBSCC--------EEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEE
T ss_pred ceeeeccCCceeeEEEeccCCCCC--------EEEEEECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEE
Confidence 34667889999999999985 666 79999964 1112222 23455678899999999999
Q ss_pred eCCCCcEEEEEEEEec
Q psy6361 72 NAAGSTSKTIQMNVLV 87 (148)
Q Consensus 72 ~~~~~~~~~~~l~v~~ 87 (148)
|..+.....+.|.|..
T Consensus 198 N~~g~~~~~~~v~v~e 213 (226)
T 4f80_A 198 SSLLGLEKTASISIAD 213 (226)
T ss_dssp ETTTTEEEEEEECCCT
T ss_pred eCCCCeEEEEEEEECC
Confidence 9999887777777653
No 416
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=98.89 E-value=2.5e-09 Score=62.47 Aligned_cols=73 Identities=10% Similarity=0.095 Sum_probs=52.1
Q ss_pred eeeeEeeeccceeeeeecccC----CCCcCCCCccEEEEeeCC-----E--------------------EecCCceEEEe
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTN----LPQSRNPGQVIKRYLKDL-----L--------------------YVTRNGSFVIN 56 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~----~p~~~~~~~~~v~W~~~~-----~--------------------~~~~~~~l~i~ 56 (148)
....+..|+.+.|.|.+.+.+ .+ .+.|||.. . .......|.|.
T Consensus 9 ~~v~v~~G~~v~L~C~~~~~~~~~~~~--------~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~sL~I~ 80 (126)
T 4ffy_L 9 ASLAVSLGQRATISCRASESVDHYGNS--------FIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTID 80 (126)
T ss_dssp SEEEEETTSCEEEEEEESSCCEETTEE--------CEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEES
T ss_pred CeEEEeCCCCEEEEEecCCCcccCCCc--------eEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCCCEEEEEEC
Confidence 357789999999999998775 33 58999852 1 01123479999
Q ss_pred cCCCCCCEEEEEEEEeCCCC-cEEEEEEEEe
Q psy6361 57 NIAEKDTNVYTCTVSNAAGS-TSKTIQMNVL 86 (148)
Q Consensus 57 ~~~~~d~g~y~C~~~~~~~~-~~~~~~l~v~ 86 (148)
+++.+|+|.|+|.+.+.... ......|.|.
T Consensus 81 ~v~~~DsG~Y~C~~~~~~~~~fg~gT~L~V~ 111 (126)
T 4ffy_L 81 SVETDDAATYYCQQNNEDPYTFGGGTKLEIK 111 (126)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEEEE
T ss_pred CCCHHHCEEEEEEEecCCCcEECCCEEEEEe
Confidence 99999999999998875432 2233455554
No 417
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.87 E-value=1.9e-08 Score=58.19 Aligned_cols=79 Identities=15% Similarity=0.230 Sum_probs=51.7
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE----------------------------Ee-----cCCceE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL----------------------------YV-----TRNGSF 53 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~----------------------------~~-----~~~~~l 53 (148)
...+..|+.+.|.|.+...... .....+.|++.+. .. ..+.+|
T Consensus 8 ~v~~~~G~~v~L~C~~~~~~~~----~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 83 (124)
T 1neu_A 8 EVYGAVGSQVTLHCSFWSSEWV----SDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSI 83 (124)
T ss_dssp EEEEETTSCEEECCEEECSSCC----CSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCE
T ss_pred eEEEEeCCeEEEEeEEeCCCCC----CCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEE
Confidence 5678999999999998653110 0012689987420 00 123579
Q ss_pred EEecCCCCCCEEEEEEEEeCCCC--cEEEEEEEEecCC
Q psy6361 54 VINNIAEKDTNVYTCTVSNAAGS--TSKTIQMNVLVPP 89 (148)
Q Consensus 54 ~i~~~~~~d~g~y~C~~~~~~~~--~~~~~~l~v~~~p 89 (148)
.|.+++.+|+|.|.|.+.+..+. ....+.|.|..+|
T Consensus 84 ~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~~~p 121 (124)
T 1neu_A 84 VIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKV 121 (124)
T ss_dssp EECSCCGGGCEEEEEEEEC----CCEEEEEEEEEEC--
T ss_pred EEccCChhhCEEEEEEEEcCCCCcCcEeeEEEEEecCC
Confidence 99999999999999999987654 3566777777554
No 418
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.87 E-value=8.8e-09 Score=65.25 Aligned_cols=74 Identities=8% Similarity=0.068 Sum_probs=52.7
Q ss_pred eEeeeccceeeeeecccCCCCcCCCCccEEEEeeC-CEEe---------c-CCceE---EEecCCCCCCEEEEEEEEeCC
Q psy6361 9 QAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKD-LLYV---------T-RNGSF---VINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 9 ~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~-~~~~---------~-~~~~l---~i~~~~~~d~g~y~C~~~~~~ 74 (148)
.+..|+.+.|.|.+.+.|.| .+.|+++ +... . ....+ .+..+...|.|.|+|.+.|..
T Consensus 127 ~~~~g~~v~L~C~~~g~P~p--------~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~ 198 (222)
T 3sbw_C 127 VDPVTSEHELTCQAEGYPKA--------EVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLD 198 (222)
T ss_dssp EETTTTEEEEEEEEEEBSCC--------EEEEEETTCCEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETT
T ss_pred eecCCCcEEEEEEecCCCCC--------eEEEEECCCceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCc
Confidence 55678899999999997777 6999998 4111 1 11112 223456789999999999999
Q ss_pred CCcEEEEEEEEecCCE
Q psy6361 75 GSTSKTIQMNVLVPPF 90 (148)
Q Consensus 75 ~~~~~~~~l~v~~~p~ 90 (148)
+.....+.|.|..+|.
T Consensus 199 g~~~~~~~l~v~~~p~ 214 (222)
T 3sbw_C 199 PEENHTAELVIPELPL 214 (222)
T ss_dssp TTEEEEEEEECCCC--
T ss_pred cceeeEEEEEecCCcc
Confidence 9888888888776554
No 419
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.86 E-value=8.5e-09 Score=66.79 Aligned_cols=71 Identities=14% Similarity=0.194 Sum_probs=53.5
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE-------EecCCceEEEecCCCCCCEEEEEEEEeCC---CCc
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL-------YVTRNGSFVINNIAEKDTNVYTCTVSNAA---GST 77 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~-------~~~~~~~l~i~~~~~~d~g~y~C~~~~~~---~~~ 77 (148)
..+..|+.+.|.|.+.+.+ + .+.|+|++. .......|.|.+++.+|+|.|+|.+.+.. ...
T Consensus 111 ~~v~~G~~vtL~C~~~~~~-~--------~~~w~k~g~~~~~~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~ 181 (242)
T 1p6f_A 111 PEVISGEKVTFYCRLDTAT-S--------MFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFP 181 (242)
T ss_dssp SEEETTCEEEEEEECTTSC-S--------EEEEEECSSSCEEEEEECSSEEEEEEEECCGGGCEEEEEEEEEETTEECCC
T ss_pred CccCCCCcEEEEEecCCCC-C--------EEEEEECCCccCccccCCCceEEEEeCCCccccCEEEEEEEECCCCcccCC
Confidence 3567899999999987542 3 699999971 22345689999999999999999998764 224
Q ss_pred EEEEEEEEec
Q psy6361 78 SKTIQMNVLV 87 (148)
Q Consensus 78 ~~~~~l~v~~ 87 (148)
+..+.|.|..
T Consensus 182 S~~~~l~V~~ 191 (242)
T 1p6f_A 182 SEPVKLLVTG 191 (242)
T ss_dssp CCCEEEEEEC
T ss_pred CCCEEEEEec
Confidence 5556677764
No 420
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=98.86 E-value=1.6e-08 Score=58.94 Aligned_cols=77 Identities=12% Similarity=0.262 Sum_probs=53.8
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC----------------------EEe-----cCCceEEEecCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL----------------------LYV-----TRNGSFVINNIA 59 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~----------------------~~~-----~~~~~l~i~~~~ 59 (148)
...+..|+.+.|.|.+....... .+.|++.. ... .....|.|.+++
T Consensus 11 ~v~~~~G~svtL~C~~s~~~~~~-------~~~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~ 83 (124)
T 2nms_A 11 TVNGLERGSLTVQCVYRSGWETY-------LKWWCRGAIWRDCKILVKTSGSEQEVKRDRVSIKDNQKNRTFTVTMEDLM 83 (124)
T ss_dssp EEEEETTCCEEEEEEECTTCTTS-------EEEEEESSSSTTCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCC
T ss_pred EEEEeCCCCEEEEeEEeCCcccc-------cEEEEeCCCCCCceEEEEcCCcccceeCCCEEEEEcCcCCEEEEEEeCCC
Confidence 46788999999999987653221 58898863 000 112479999999
Q ss_pred CCCCEEEEEEEEeCCCCcEEEEEEEEecCCE
Q psy6361 60 EKDTNVYTCTVSNAAGSTSKTIQMNVLVPPF 90 (148)
Q Consensus 60 ~~d~g~y~C~~~~~~~~~~~~~~l~v~~~p~ 90 (148)
.+|+|.|.|.+..........+.|.|..+|.
T Consensus 84 ~~Dsg~Y~C~~~~~~~~~~~~v~L~V~~~~~ 114 (124)
T 2nms_A 84 KTDADTYWCGIEKTGNDLGVTVQVTIDPAPV 114 (124)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEECCC-
T ss_pred HHHCEEEEEEEEcCCCCccEEEEEEEeCCCc
Confidence 9999999999887654445556777765443
No 421
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=98.86 E-value=9.4e-09 Score=60.44 Aligned_cols=74 Identities=15% Similarity=0.240 Sum_probs=52.3
Q ss_pred ceeeeEeeeccceeeeeecc---cCCCCcCCCCccEEEEeeCC----E--Ee-----------------------c----
Q psy6361 5 MNVEQAMLLDLIPMHSRYNY---TNLPQSRNPGQVIKRYLKDL----L--YV-----------------------T---- 48 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~---~~~p~~~~~~~~~v~W~~~~----~--~~-----------------------~---- 48 (148)
.....+..|+.+.|.|.+.. .+.+ .+.|+|.+ . .. .
T Consensus 11 ~~~v~v~~G~~v~L~C~~~~~~~~~~~--------~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (135)
T 1xt5_A 11 HTEVEVHAGGTVELPCSYQLANDTQPP--------VISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLG 82 (135)
T ss_dssp CSEEEEETTSCEEECCEEEEETCCSCC--------EEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTT
T ss_pred CceEEEeCCCCEEEeeEeecCCCCCcc--------EEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcC
Confidence 34577899999999999864 2333 69999864 0 00 0
Q ss_pred -------CCceEEEecCCCCCCEEEEEEEEeCCCC-----cEEEEEEEEe
Q psy6361 49 -------RNGSFVINNIAEKDTNVYTCTVSNAAGS-----TSKTIQMNVL 86 (148)
Q Consensus 49 -------~~~~l~i~~~~~~d~g~y~C~~~~~~~~-----~~~~~~l~v~ 86 (148)
....|.|.+++.+|+|.|.|.+.+.... ....+.|.|.
T Consensus 83 R~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V~ 132 (135)
T 1xt5_A 83 RASVANLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVT 132 (135)
T ss_dssp TEEESCTTSCCEEECSCCGGGCEEEEEEEECSSCCSGGGEEEEEEEEEEE
T ss_pred cEEEecCCCCeEEECCCChhhCcEEEEEEEcCCccccccccceeEEEEEe
Confidence 1257999999999999999999985432 3355566554
No 422
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=98.86 E-value=1.7e-08 Score=56.05 Aligned_cols=59 Identities=19% Similarity=0.346 Sum_probs=47.4
Q ss_pred cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceEEE------EEEEEee
Q psy6361 87 VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYITF------FLFFQRL 146 (148)
Q Consensus 87 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~~~------~l~~~~~ 146 (148)
.+|.+... +....+.+|+.+.|.|.+.+.|.|.+.|+++|..+....++... .|.|..+
T Consensus 5 ~~P~i~~~-~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~ 69 (99)
T 3puc_A 5 SKPVIVTG-LQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKT 69 (99)
T ss_dssp EEEEEEEC-CCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSC
T ss_pred CCCEEEec-CccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCC
Confidence 35677777 77889999999999999999999999999999999877665433 4555543
No 423
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.86 E-value=2.6e-09 Score=62.74 Aligned_cols=77 Identities=12% Similarity=0.098 Sum_probs=54.7
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E-----------------Ee------cCCceEEEec
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L-----------------YV------TRNGSFVINN 57 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~-----------------~~------~~~~~l~i~~ 57 (148)
....+..|+.+.|.|.+.+..... .+.||+.. . .. .....|.|.+
T Consensus 9 ~~~~v~~G~~vtL~C~~s~~~~~~-------~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~ 81 (129)
T 3rrq_A 9 ALLVVTEGDNATFTCSFSNTSESF-------VLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVR 81 (129)
T ss_dssp SEEEEETTSCEEEEEECCCCC-CE-------EEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESS
T ss_pred CEEEEeCCCCEEEEeEecCCCCCc-------EEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECC
Confidence 356788999999999998764221 68898742 0 00 0124799999
Q ss_pred CCCCCCEEEEEEEEeCCCCc----EEEEEEEEecCC
Q psy6361 58 IAEKDTNVYTCTVSNAAGST----SKTIQMNVLVPP 89 (148)
Q Consensus 58 ~~~~d~g~y~C~~~~~~~~~----~~~~~l~v~~~p 89 (148)
++.+|+|.|.|.+.+..+.. +..+.|.|...|
T Consensus 82 ~~~~Dsg~Y~C~~~~~~~~~~~~~s~~~~L~V~~~~ 117 (129)
T 3rrq_A 82 ARRNDSGTYLCGAISLAPKLQIKESLRAELRVTERR 117 (129)
T ss_dssp CCGGGCEEEEEEEEECGGGCEEEECCCEEEEEECCC
T ss_pred CChhHCEEEEEEEEecCCCceeeEeceEEEEEecCc
Confidence 99999999999998876543 345677777544
No 424
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.85 E-value=5.2e-09 Score=67.82 Aligned_cols=65 Identities=17% Similarity=0.329 Sum_probs=32.2
Q ss_pred CCCCCCEEEEEEEEeCCCCcEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeeeccc-----CCeEEEEEC
Q psy6361 58 IAEKDTNVYTCTVSNAAGSTSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVP-----TPDFSWYKD 126 (148)
Q Consensus 58 ~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p-----~~~~~W~~~ 126 (148)
++.+|+|.|+|.+. +.......+.+..++.+... +....+.+|+.+.|.|.+.+.| .+.+.|+|+
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~~~~~~~~~~~~~~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~ 80 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTNYWMNWLRELVMTQS-PLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQ 80 (254)
T ss_dssp ------------------------------CCCEEEE-CSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEE
T ss_pred ecCCccEEEEEcCc---hhhhhhhhhheeeceeEEeC-CceEEecCCCcEEEEeeccCcccccCCCCceEEEEe
Confidence 67899999999998 22222233333446677766 7788999999999999998887 489999973
No 425
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=98.85 E-value=2.6e-09 Score=61.02 Aligned_cols=60 Identities=10% Similarity=0.133 Sum_probs=46.3
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EE--------------------ecCCceEEEecCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LY--------------------VTRNGSFVINNIAE 60 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~--------------------~~~~~~l~i~~~~~ 60 (148)
....+..|+++.|.|.+.+.+.+ .+.||+.. .. ......|.|.+++.
T Consensus 12 ~~~~~~~G~~v~L~C~~~~~~~~--------~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~ 83 (111)
T 1i3g_L 12 KFMSTSVGDRVSITCKASQDVGT--------AVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQS 83 (111)
T ss_dssp SEEECCTTCCEEEEEEESSCCTT--------CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred CEEEEcCCCCEEEEEEeCCCCCC--------CEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCCCEEEEEECCCCH
Confidence 35678899999999999876644 59999853 00 01124699999999
Q ss_pred CCCEEEEEEEEeC
Q psy6361 61 KDTNVYTCTVSNA 73 (148)
Q Consensus 61 ~d~g~y~C~~~~~ 73 (148)
+|+|.|.|.+.+.
T Consensus 84 ~DsG~Y~C~~~~~ 96 (111)
T 1i3g_L 84 EDLADYFCQQYSS 96 (111)
T ss_dssp GGCSEEEEEECSS
T ss_pred HHCEEEEEEEecC
Confidence 9999999998764
No 426
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=98.84 E-value=2e-09 Score=61.54 Aligned_cols=59 Identities=12% Similarity=0.223 Sum_probs=46.2
Q ss_pred eeeeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeCC-------------EEe------cCCceEEEecCCCCCCE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDL-------------LYV------TRNGSFVINNIAEKDTN 64 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~-------------~~~------~~~~~l~i~~~~~~d~g 64 (148)
....+..|+.+.|.|.+.+.. .+ .+.||++. +.. .....|.|.++..+|+|
T Consensus 8 ~~~~~~~G~~v~L~C~~~~~~~~~~--------~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG 79 (111)
T 2ywz_A 8 RTITKETGESLTIKCVLKDHSCGLS--------STTWYRTQLGSTNEKTISIGGRYDETVDKGSKSFSLRISDLRVEDSG 79 (111)
T ss_dssp SEEEECTTCCEEEEEEEESCSSCCC--------EEEEEEEETTCCCCEECCSBTTEEEEEETTTTEEEEEECSCCGGGCE
T ss_pred CcEEEccCCCEEEEeEECCCCCCCC--------EEEEEEeCCCCCceEeeEeCCCEEEEEeCCCCEEEEEECCCChhcCE
Confidence 456789999999999998764 33 69999852 010 12357999999999999
Q ss_pred EEEEEEEe
Q psy6361 65 VYTCTVSN 72 (148)
Q Consensus 65 ~y~C~~~~ 72 (148)
.|.|.+.+
T Consensus 80 ~Y~C~~~~ 87 (111)
T 2ywz_A 80 TYKCQADY 87 (111)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEc
Confidence 99999988
No 427
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.84 E-value=8.7e-09 Score=58.93 Aligned_cols=61 Identities=13% Similarity=0.220 Sum_probs=46.6
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC----EE----------------e------cCCceEEEecCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL----LY----------------V------TRNGSFVINNIA 59 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~----~~----------------~------~~~~~l~i~~~~ 59 (148)
....+..|+.+.|.|.+.+.+ + .+.|+|.. .. . .....|.|.+++
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~-~--------~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 79 (113)
T 1h5b_A 9 SALSLHEGTDSALRCNFTTTM-R--------SVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQ 79 (113)
T ss_dssp SEEEEETTCCEEEEEEESSCC-S--------EEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCC
T ss_pred CEEEEecCCcEEEEEEECCCC-c--------eEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCC
Confidence 346789999999999998753 3 69999853 10 0 012279999999
Q ss_pred CCCCEEEEEEEEeCCC
Q psy6361 60 EKDTNVYTCTVSNAAG 75 (148)
Q Consensus 60 ~~d~g~y~C~~~~~~~ 75 (148)
.+|+|.|+|.+.+..+
T Consensus 80 ~~DsG~Y~C~~~n~~~ 95 (113)
T 1h5b_A 80 LEDSGTYFCAAEASSG 95 (113)
T ss_dssp GGGCEEEEEEEECSSS
T ss_pred hhhCEEEEEEEecCCC
Confidence 9999999999998654
No 428
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=98.84 E-value=8.1e-09 Score=65.01 Aligned_cols=78 Identities=10% Similarity=0.048 Sum_probs=54.0
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe-----c----------CCceEEEecCCCCCCEEEEEEEEe
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV-----T----------RNGSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~-----~----------~~~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
..+..|+.+.|.|.+.+.+++. .+.+.|+|++... . ....|.|.....+|.|.|+|.|.|
T Consensus 101 ~~~~~G~~~~L~C~~~~~~p~~-----~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n 175 (202)
T 1vca_A 101 GPLEAGKPITVKCSVADVYPFD-----RLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKL 175 (202)
T ss_dssp SCEETTSCEEEEEEEEEEBSGG-----GEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEE
T ss_pred eEEcCCCCEEEEEEECCcCCCC-----CeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEc
Confidence 3477899999999998864321 1268999998221 0 112346777777888999999999
Q ss_pred CCCC-------cEEEEEEEEecCCE
Q psy6361 73 AAGS-------TSKTIQMNVLVPPF 90 (148)
Q Consensus 73 ~~~~-------~~~~~~l~v~~~p~ 90 (148)
..+. ......|.|..+|.
T Consensus 176 ~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 176 HIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp CSCCCTTSCSEEEEEEECCEECCC-
T ss_pred cccCCCCcceeEeeEEEEEEecCCC
Confidence 7754 34567777877775
No 429
>2ak4_D SB27 T cell receptor alpha chain; bulged epitopes, PMHC/TCR complex, immune system; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kxf_D 3nfj_I 3ffc_D
Probab=98.84 E-value=7.1e-09 Score=65.87 Aligned_cols=103 Identities=13% Similarity=0.176 Sum_probs=65.9
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EE------------e-----------cCCceEEEec
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LY------------V-----------TRNGSFVINN 57 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~------------~-----------~~~~~l~i~~ 57 (148)
....+..|+.+.|.|.+.+..... .+.||+.. .. . .....|.|.+
T Consensus 11 ~~v~v~~G~~vtL~C~~s~~~~~~-------~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~ 83 (211)
T 2ak4_D 11 TEISVVEKEDVTLDCVYETRDTTY-------YLFWYKQPPSGELVFLIRRNSFDEQNEISGRYSWNFQKSTSSFNFTITA 83 (211)
T ss_dssp CEEEEETTCCEEECCEEECSCSSC-------EEEEEEECTTCCCEEEEEEETTSCSEEEETTEEEEEETTTTEEEEEESS
T ss_pred CEEEEecCCCEEEEEEecCCcCce-------eEEEEEECCCCccEEEEEECCCcCccCcCCCEEEEEcCCCCEEEEEECc
Confidence 456789999999999997654332 58998853 00 0 0123799999
Q ss_pred CCCCCCEEEEEEEEeCC--C--CcEEEEEEEEecC-----CEEEeCCCceEEEecCCcEEEEeeeec-ccCCeE
Q psy6361 58 IAEKDTNVYTCTVSNAA--G--STSKTIQMNVLVP-----PFFKDEQQESVAIVVNHPMNISCSHYG-VPTPDF 121 (148)
Q Consensus 58 ~~~~d~g~y~C~~~~~~--~--~~~~~~~l~v~~~-----p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~~~ 121 (148)
++.+|+|.|.|.+.+.. . .......|.|... |.+-.. .. ....+.|.|.+.| .|.+.+
T Consensus 84 ~~~~Dsg~Y~C~~~~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~-~~-----~~~~vtL~Cl~~gf~P~~~v 151 (211)
T 2ak4_D 84 SQVVDSAVYFCALSGFYNTDKLIFGTGTRLQVFPNIQNPDPAVYQL-RD-----SKSSDKSVCLFTDFDSQTNV 151 (211)
T ss_dssp CCGGGCEEEEEEEECSBTTSCCEECCCEEEEEECCCSSCCCEEEEE-BC-----CSSSCCEEEEEESCCTTCCC
T ss_pred cccccCceEEEEEEcCCCcceeeECCCEEEEEeCcCCCCCCEEEEc-cC-----CCCceEEEEEeeeecCCccc
Confidence 99999999999988642 1 1112345666532 332222 11 1236899999987 577655
No 430
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.83 E-value=7.3e-09 Score=67.20 Aligned_cols=81 Identities=14% Similarity=0.097 Sum_probs=54.9
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E--------------------EecCCceEEEecCCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L--------------------YVTRNGSFVINNIAEK 61 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~--------------------~~~~~~~l~i~~~~~~ 61 (148)
...+..|+.+.|.|.+.+.+.|. ....+.|+|+. . .......|.|.+++.+
T Consensus 142 ~~~v~~G~~v~L~C~~~~~~~~~----~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 217 (253)
T 3uzq_A 142 SLAVSLGQRATISCRASENVDRY----GNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEAD 217 (253)
T ss_dssp EEEECTTSCEEEEEEESSCCEET----TEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eEEEeCCCCEEEEEEecCccccC----CCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHH
Confidence 35678899999999999877650 00149999842 1 0111235999999999
Q ss_pred CCEEEEEEEEeCCCC-cEEEEEEEEecCCEE
Q psy6361 62 DTNVYTCTVSNAAGS-TSKTIQMNVLVPPFF 91 (148)
Q Consensus 62 d~g~y~C~~~~~~~~-~~~~~~l~v~~~p~~ 91 (148)
|+|.|+|.+.|.... ......|.|...+..
T Consensus 218 DsG~Y~C~~~n~~~~~fg~gt~l~v~~~~~~ 248 (253)
T 3uzq_A 218 DVATYFCQRSNEVPWTFGGGTKLEIKRPLEH 248 (253)
T ss_dssp GCEEEEEEECSSSSCCBCCCEEEEECCC---
T ss_pred HCEEEEEEEccCCCcEECCCEEEEEcCCCCC
Confidence 999999999986544 444567777654433
No 431
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.83 E-value=6.2e-09 Score=67.65 Aligned_cols=73 Identities=12% Similarity=0.114 Sum_probs=52.8
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC----EE---------------------ecCCceEEEecCCCCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL----LY---------------------VTRNGSFVINNIAEKD 62 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~----~~---------------------~~~~~~l~i~~~~~~d 62 (148)
..+..|+.+.|.|.+.+.+.| .+.|+|+. .. ......|.|.+++.+|
T Consensus 148 ~~v~~G~~v~L~C~~~~~~~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 219 (256)
T 3umt_A 148 LSASLGERVSITCRASQDIGS--------NLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESED 219 (256)
T ss_dssp EEECTTCCEEEEEEESSCCTT--------CEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGG
T ss_pred EEEECCCCEEEEEEEecCCCc--------EEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhH
Confidence 567889999999999997776 59999842 00 1112359999999999
Q ss_pred CEEEEEEEEeCCCC-cEEEEEEEEecC
Q psy6361 63 TNVYTCTVSNAAGS-TSKTIQMNVLVP 88 (148)
Q Consensus 63 ~g~y~C~~~~~~~~-~~~~~~l~v~~~ 88 (148)
+|.|+|.+.+.... ....+.|.|...
T Consensus 220 ~G~Y~C~~~~~~~~~fg~gt~L~V~~~ 246 (256)
T 3umt_A 220 FVDYYCLQYASSPPTFGGGTKLEIKRA 246 (256)
T ss_dssp CSEEEEEECSSSSCEECCCEEEEEC--
T ss_pred CEEEEEEEeeCCCcEECCCEEEEEECC
Confidence 99999999885443 334566776643
No 432
>1oga_D T-cell receptor alpha chain V region, beta-2-microglobulin; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2xna_A 2xn9_A 2vlm_D 2vlk_D 2vlj_D 2vlr_D 2cdf_A 2wbj_C* 3qdm_D 3qeq_D
Probab=98.83 E-value=7.8e-09 Score=65.88 Aligned_cols=101 Identities=11% Similarity=0.137 Sum_probs=64.1
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E-----------------Ee-----cCCceEEEecC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L-----------------YV-----TRNGSFVINNI 58 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~-----------------~~-----~~~~~l~i~~~ 58 (148)
....+..|+.+.|.|.+.. ... .+.||+.. . .. .....|.|.++
T Consensus 9 ~~v~v~~G~~vtL~C~~~~-~~~--------~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~v 79 (215)
T 1oga_D 9 QFLSIQEGENLTVYCNSSS-VFS--------SLQWYRQEPGEGPVLLVTVVTGGEVKKLKRLTFQFGDARKDSSLHITAA 79 (215)
T ss_dssp SEEEEETTCCEEEEEECSS-CCS--------CEEEEEECTTSCCEEEEEECSTTCEEEETTEEEEECTTSSEEEEEESSC
T ss_pred CEEEEecCCCEEEEEEEcC-CCc--------eEEEEEeCCCCCcEEEEEEcCCCCcccCCCEEEEEcCCCCEEEEEEccC
Confidence 4567899999999999842 222 58998853 0 00 01247999999
Q ss_pred CCCCCEEEEEEEEeCCCC--cEEEEEEEEecC-----CEEEeCCCceEEEecCCcEEEEeeeec-ccCCeE
Q psy6361 59 AEKDTNVYTCTVSNAAGS--TSKTIQMNVLVP-----PFFKDEQQESVAIVVNHPMNISCSHYG-VPTPDF 121 (148)
Q Consensus 59 ~~~d~g~y~C~~~~~~~~--~~~~~~l~v~~~-----p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~~~ 121 (148)
+.+|+|.|.|.+.+.... ......|.|... |.+... . .....+.|.|.+.| .|.|.+
T Consensus 80 ~~~Dsg~Y~C~~~~~~~~~~fg~gt~L~V~~~~~~~~P~V~~~-~-----~~~~~vtL~C~~~gf~P~p~v 144 (215)
T 1oga_D 80 QPGDTGLYLCAGAGSQGNLIFGKGTKLSVKPNIQNPDPAVYQL-R-----DSKSSDKSVCLFTDFDSQTNV 144 (215)
T ss_dssp CGGGCEEEEEEEECTTSSEEECCCEEEEEECCCSSCCCEEEEE-E-----BSSSSSCEEEEEESCCTTCCC
T ss_pred CcccCceEEEEEecccccceeCCCEEEEEeccCCCcCCEEEEc-C-----CCCCCeEEEEEccccccCccc
Confidence 999999999998764221 112345666532 222221 0 12247899999977 577755
No 433
>2q86_A Valpha14 TCR; INKT cells, TCR, glycolipid recognition, innate immunity, IM system; HET: NAG BMA MAN FUC; 1.85A {Mus musculus} PDB: 3quy_C* 3o9w_C* 3qux_C* 3o8x_C* 3quz_C* 3rtq_C* 3rzc_C* 3ta3_C* 3tvm_C* 3qi9_C* 3ard_C* 3are_C* 3arf_C* 3arg_C* 3he6_C* 3he7_C* 3arb_C* 3scm_C* 3sda_C* 3sdc_C* ...
Probab=98.82 E-value=3.2e-09 Score=68.29 Aligned_cols=103 Identities=15% Similarity=0.146 Sum_probs=65.8
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E----------------E-e-----cCCceEEEecC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L----------------Y-V-----TRNGSFVINNI 58 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~----------------~-~-----~~~~~l~i~~~ 58 (148)
....+..|+.+.|.|.+.+...+ .+.||+.. . . . .....|.|.++
T Consensus 9 ~~v~v~~G~svtL~C~~s~~~~~--------~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~ 80 (229)
T 2q86_A 9 QSLVVRQGENCVLQCNYSVTPDN--------HLRWYKQDTGKGLVLLTVLVDQKDKTSNGRYSATLDKDAKHSTLHITAT 80 (229)
T ss_dssp SEEEEETTCCEEEEEEECCSCCS--------CEEEEEECTTCCEEEEEEECSSEEEEEETTEEEEEETTTTEEEEEECSC
T ss_pred CEEEEecCCCEEEEEEECCCCCc--------EEEEEEECCCCCcEEEEEEcCCCCcccCCCEEEEEcCCCCEEEEEEccc
Confidence 34678899999999999776544 48998852 0 0 0 01237999999
Q ss_pred CCCCCEEEEEEEEeCCCC-cEEEEEEEEecC-----CEEEeCCCceEEEecCCcEEEEeeeec-ccCCeEE
Q psy6361 59 AEKDTNVYTCTVSNAAGS-TSKTIQMNVLVP-----PFFKDEQQESVAIVVNHPMNISCSHYG-VPTPDFS 122 (148)
Q Consensus 59 ~~~d~g~y~C~~~~~~~~-~~~~~~l~v~~~-----p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~~~~ 122 (148)
+.+|+|.|+|.+.+.... ......|.|... |.+... . .....+.+.|.+.| .|.|.+.
T Consensus 81 ~~~Dsg~Y~C~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~-~-----~~~~~~tL~Cl~~gf~P~p~V~ 145 (229)
T 2q86_A 81 LLDDTATYFCVVGDRGSALFGSGTQLIVIPYIQNPEPAVYQL-K-----DPRSQDSTLCLFTDFDSQINVP 145 (229)
T ss_dssp CGGGCEEEEEEESCGGGCEECCCEEEEEECCCSSCCCEEEEE-E-----CTTSTTCEEEEEEEECTTCCCC
T ss_pred CcccCccEEEEEEecCcccccCCEEEEEECcCCCCCCEEEEc-c-----CCCCCeEEEEEECCcCcCCccc
Confidence 999999999998653211 112335666532 222211 1 12237889999887 5777553
No 434
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=98.82 E-value=2.6e-08 Score=55.02 Aligned_cols=58 Identities=12% Similarity=0.122 Sum_probs=45.5
Q ss_pred cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceEEE------EEEEEee
Q psy6361 87 VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYITF------FLFFQRL 146 (148)
Q Consensus 87 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~~~------~l~~~~~ 146 (148)
.+|.+... +.+..+.+|+.+.|.|.+.+ +.+.+.|+|||..+..+.++... .|.|..+
T Consensus 4 ~~~~~~~~-~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v 67 (93)
T 1waa_A 4 ALIEVEKP-LYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNC 67 (93)
T ss_dssp CCCCEEEC-CCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSC
T ss_pred CCcEeecc-CcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCC
Confidence 35677777 78889999999999999976 45789999999999877666432 4666554
No 435
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.82 E-value=2e-08 Score=62.72 Aligned_cols=57 Identities=12% Similarity=0.053 Sum_probs=45.2
Q ss_pred cceeeeeecccC-CCCcCCCCccEEEEeeCCEEecCCceEEEecCCCC-CCEEEEEEEEeCCCCcEE
Q psy6361 15 LIPMHSRYNYTN-LPQSRNPGQVIKRYLKDLLYVTRNGSFVINNIAEK-DTNVYTCTVSNAAGSTSK 79 (148)
Q Consensus 15 ~~~l~C~~~~~~-~p~~~~~~~~~v~W~~~~~~~~~~~~l~i~~~~~~-d~g~y~C~~~~~~~~~~~ 79 (148)
.+.|.|.+.+.+ .| .+.|++++........|.|...... |+|.|+|.+.|..+..+.
T Consensus 126 ~v~L~C~~~g~~p~p--------~i~W~~~g~~l~~~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~ 184 (193)
T 2if7_A 126 ELHLTCSVEDADDNV--------SFRWEALGNTLSSQPNLTVSWDPRISSEQDYTCIAENAVSNLSF 184 (193)
T ss_dssp EEEEEEEEESCCTTC--------EEEEEETTEEEESSSEEEEEECTTTCSCCEEEEEEEETTEEEEE
T ss_pred eEEEEEEEecCCCce--------EEEEEeCCEEcCCCCeEEEEeccCcCCCCcEEEEEECCCCcccc
Confidence 799999999854 45 7999999866666677888655554 899999999999886543
No 436
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=98.82 E-value=1.5e-08 Score=61.16 Aligned_cols=62 Identities=21% Similarity=0.468 Sum_probs=50.2
Q ss_pred EEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceEEE-------EEEEEee
Q psy6361 84 NVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYITF-------FLFFQRL 146 (148)
Q Consensus 84 ~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~~~-------~l~~~~~ 146 (148)
.+..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+|+|..+....++... .|.|..+
T Consensus 37 ~v~~~P~~~~~-~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v 105 (154)
T 1fhg_A 37 KPHVKPYFTKT-ILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEV 105 (154)
T ss_dssp CCCEEEEEEEC-CCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSC
T ss_pred cCCCCCeEEcc-CCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCC
Confidence 34467888877 77889999999999999999999999999999999876665443 5666544
No 437
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=98.82 E-value=2.7e-09 Score=66.14 Aligned_cols=58 Identities=12% Similarity=0.071 Sum_probs=45.2
Q ss_pred eEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe-------cCCceEEEecCCCCCCEEEEEEEEeCCC
Q psy6361 9 QAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV-------TRNGSFVINNIAEKDTNVYTCTVSNAAG 75 (148)
Q Consensus 9 ~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~-------~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 75 (148)
.+..|+.+.|.|.+.+.+ + .+.|+|++... .....|.|.+++.+|+|.|+|.+.|...
T Consensus 104 ~v~~G~~v~l~C~~~~~~-~--------~~~w~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 104 AVSSGGDVTLQCQTRYGF-D--------QFALYKEGDPAPYKNPERWYRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp SSCCTTCEEEEEECSSCC-C--------EEEEEECCCCTTSCCCCEEEEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred eecCCCcEEEEEEcCCCC-c--------EEEEEECCCcCcceecCCCceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 456799999999976543 3 69999997221 2345788999999999999999999754
No 438
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=98.82 E-value=8.4e-08 Score=71.10 Aligned_cols=98 Identities=18% Similarity=0.193 Sum_probs=73.2
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEE-Ee--eCCE-------EecC----CceEEEecCCCCCCEEEEEEEEe
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKR-YL--KDLL-------YVTR----NGSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~-W~--~~~~-------~~~~----~~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
...+..|+.+.|.|.+.+.|.|. +. |+ +++. .... ...|.|.++...|+|.|.|.|.|
T Consensus 173 ~~~v~~G~~v~l~C~~~g~P~p~--------i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n 244 (731)
T 2v5y_A 173 NVEVNAGQFATFQCSAIGRTVAG--------DRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRT 244 (731)
T ss_dssp CEEEETTSCEEEEEEEESCCCTT--------CEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEE
T ss_pred ceEEeCCCcEEEEEEeCCCCCCc--------eeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEEC
Confidence 46788999999999999999984 66 77 5551 1111 25899999999999999999999
Q ss_pred CCCC-cEEEEEEEEecCCEEEeCCCceEEEecCCcEEEEeeee
Q psy6361 73 AAGS-TSKTIQMNVLVPPFFKDEQQESVAIVVNHPMNISCSHY 114 (148)
Q Consensus 73 ~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 114 (148)
..|. .+....|.|..+|..... +... ......+.+.|...
T Consensus 245 ~~G~~~s~~~~l~V~~~P~~~~~-p~~~-~~~~~~v~l~w~~~ 285 (731)
T 2v5y_A 245 EGGVGISNYAELVVKEPPVPIAP-PQLA-SVGATYLWIQLNAN 285 (731)
T ss_dssp TTEEEECCCEEEEEECCCCBSSC-CEEE-EECSSCEEEECCCS
T ss_pred CCCCcceeeEEEEEecCCCCCCC-ccee-ccCCceEEEEeCCc
Confidence 9987 566677888877765544 3322 33456788888753
No 439
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=98.81 E-value=3.2e-09 Score=60.57 Aligned_cols=60 Identities=13% Similarity=0.193 Sum_probs=45.8
Q ss_pred eeeeEeeeccceeeeeecccC----CCCcCCCCccEEEEeeCC-----E-E-------------------ecCCceEEEe
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTN----LPQSRNPGQVIKRYLKDL-----L-Y-------------------VTRNGSFVIN 56 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~----~p~~~~~~~~~v~W~~~~-----~-~-------------------~~~~~~l~i~ 56 (148)
....+..|+.+.|.|.+.+.+ .+ .+.||+.. . . ......|.|.
T Consensus 9 ~~~~~~~G~~v~L~C~~~~~~~~~~~~--------~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~ 80 (111)
T 1j05_L 9 ASLAVSLGQRATMSCRAGESVDIFGVG--------FLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIID 80 (111)
T ss_dssp SEEECCTTSCEEEEEEESSCCEETTEE--------CEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEETTEEEEEES
T ss_pred CEEEEeCCCCEEEEeecCCCcccCCCc--------eEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccCCEEEEEEC
Confidence 356788999999999998766 33 59999852 1 0 0112379999
Q ss_pred cCCCCCCEEEEEEEEeC
Q psy6361 57 NIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 57 ~~~~~d~g~y~C~~~~~ 73 (148)
+++.+|+|.|.|.+.+.
T Consensus 81 ~v~~~DsG~Y~C~~~~~ 97 (111)
T 1j05_L 81 PVEADDVATYYCQQTNE 97 (111)
T ss_dssp SCCGGGCEEEEEEECSS
T ss_pred CCCcccCEEEEEEEecC
Confidence 99999999999998764
No 440
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=98.81 E-value=5.5e-09 Score=62.62 Aligned_cols=73 Identities=7% Similarity=0.071 Sum_probs=51.5
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EE--------------------ecCCceEEEecCCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LY--------------------VTRNGSFVINNIAEK 61 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~--------------------~~~~~~l~i~~~~~~ 61 (148)
...+..|++++|.|.+.+.+.+ .+.||+.. .. ......|.|.+++.+
T Consensus 25 ~v~v~~G~sVtL~C~~s~~~~~--------~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~v~~~ 96 (146)
T 2yc1_B 25 TLSVSPGERATLSCRASQSVRS--------YLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSGTDFTLTISSLEPE 96 (146)
T ss_dssp EEEECTTSCEEEEEEESSCCTT--------CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred EEEEecCCCEEEEEEECCCCCC--------EEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCCCEEEEEECCCCHH
Confidence 4678899999999999877654 58999853 11 011246999999999
Q ss_pred CCEEEEEEEEeCCCC-cEEEEEEEEec
Q psy6361 62 DTNVYTCTVSNAAGS-TSKTIQMNVLV 87 (148)
Q Consensus 62 d~g~y~C~~~~~~~~-~~~~~~l~v~~ 87 (148)
|+|.|+|.+.+.... ......|.|..
T Consensus 97 DsG~Y~C~~~~~~~~~fg~GT~L~V~~ 123 (146)
T 2yc1_B 97 DFAIYYCQQYRYSPRTFGQGTKVEIKR 123 (146)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEEC-
T ss_pred HCEEEEEEEecCCCCeECCCEEEEEeC
Confidence 999999998765322 22344666653
No 441
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=98.81 E-value=1.3e-08 Score=59.39 Aligned_cols=74 Identities=9% Similarity=0.107 Sum_probs=51.1
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC----------------EE------------ecC---------
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL----------------LY------------VTR--------- 49 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~----------------~~------------~~~--------- 49 (148)
...+..|+.+.|.|.+...+.+. ....+.|++.. .. ...
T Consensus 11 ~v~~~~G~~v~L~C~~~~~~~~~----~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~ 86 (128)
T 3r0n_A 11 EVRGQLGGTVELPCHLLPPVPGL----YISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDT 86 (128)
T ss_dssp EEECCTTSCEEECCEEESCCTTC----EEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTC
T ss_pred eEEEEcCCCEEEEEEeecCCCCC----cEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEecccccccccc
Confidence 46788999999999998765430 11258999951 00 001
Q ss_pred -----CceEEEecCCCCCCEEEEEEEEe-CCCCcEEEEEEE
Q psy6361 50 -----NGSFVINNIAEKDTNVYTCTVSN-AAGSTSKTIQMN 84 (148)
Q Consensus 50 -----~~~l~i~~~~~~d~g~y~C~~~~-~~~~~~~~~~l~ 84 (148)
..+|.|.+++.+|+|.|+|.+.+ ..+.....+.|.
T Consensus 87 ~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~g~~~~~~~L~ 127 (128)
T 3r0n_A 87 EAELQDATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLR 127 (128)
T ss_dssp CCBCSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEE
T ss_pred ccCCCCeEEEEccCCchhCeEEEEEEEeCCCCCcccEEEEE
Confidence 33899999999999999998765 445555555554
No 442
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.80 E-value=2.3e-08 Score=57.16 Aligned_cols=50 Identities=12% Similarity=0.135 Sum_probs=43.2
Q ss_pred cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceE
Q psy6361 87 VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYI 137 (148)
Q Consensus 87 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~ 137 (148)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+|+|..+....++.
T Consensus 6 ~pp~i~~~-~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~ 55 (114)
T 2cqv_A 6 SGPQIIQF-PEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMK 55 (114)
T ss_dssp CCCEESCC-CCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEE
T ss_pred CCCEEEeC-CCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEE
Confidence 46777766 788899999999999999999999999999999987765554
No 443
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=98.80 E-value=5.7e-09 Score=60.39 Aligned_cols=72 Identities=10% Similarity=0.149 Sum_probs=50.2
Q ss_pred eeEeeeccceeeeeecccC---CCCcCCCCccEEEEeeCC-----EE--------------------ecCCceEEEecCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTN---LPQSRNPGQVIKRYLKDL-----LY--------------------VTRNGSFVINNIA 59 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~---~p~~~~~~~~~v~W~~~~-----~~--------------------~~~~~~l~i~~~~ 59 (148)
..+..|+.+.|.|.+.+.. .+ .+.||+.. .. ......|.|.+++
T Consensus 10 ~~~~~G~~v~L~C~~~~~~~~~~~--------~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~ 81 (120)
T 1oaq_L 10 LTTSPGETVTLTCRSSTGAVTTSN--------YANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQ 81 (120)
T ss_dssp EEECTTCEEEEEEEETTBCCCGGG--------CCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEETTEEEEEEESCC
T ss_pred EEEcCCCCEEEEEEeCCCccCCCC--------EEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecCCCeEEEEECCCC
Confidence 7789999999999998765 23 58998852 00 1112479999999
Q ss_pred CCCCEEEEEEEEeCCCC-cEEEEEEEEec
Q psy6361 60 EKDTNVYTCTVSNAAGS-TSKTIQMNVLV 87 (148)
Q Consensus 60 ~~d~g~y~C~~~~~~~~-~~~~~~l~v~~ 87 (148)
.+|+|.|.|.+.+.... ......|.|..
T Consensus 82 ~~DsG~Y~C~~~~~~~~~fg~gt~L~V~~ 110 (120)
T 1oaq_L 82 TEDEAIYFCALWYSNHLVFGGGTKLTVLG 110 (120)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEEEEECC
T ss_pred hhhCeEEEEEEccCCCcEECCCEEEEEcC
Confidence 99999999998875321 12233555543
No 444
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.80 E-value=1.4e-08 Score=56.53 Aligned_cols=48 Identities=27% Similarity=0.509 Sum_probs=40.9
Q ss_pred cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCc
Q psy6361 87 VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSH 135 (148)
Q Consensus 87 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~ 135 (148)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+++|..+.....
T Consensus 4 ~~P~~~~~-p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~ 51 (100)
T 2kdg_A 4 GPPRFIQV-PENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDL 51 (100)
T ss_dssp EEEECCCC-CCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSS
T ss_pred CCCeEEeC-CCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCc
Confidence 35666666 7778899999999999999999999999999999876543
No 445
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=98.80 E-value=4.2e-08 Score=54.46 Aligned_cols=48 Identities=23% Similarity=0.395 Sum_probs=41.0
Q ss_pred cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCc
Q psy6361 87 VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSH 135 (148)
Q Consensus 87 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~ 135 (148)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++++..+.....
T Consensus 4 ~~P~~~~~-~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~ 51 (99)
T 1u2h_A 4 APPTFKVS-LMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQR 51 (99)
T ss_dssp EEEEEEEC-CCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTT
T ss_pred CCCEEEEc-CCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCC
Confidence 35677777 7778899999999999999999999999999999876543
No 446
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.80 E-value=9.6e-09 Score=64.76 Aligned_cols=66 Identities=14% Similarity=0.137 Sum_probs=48.0
Q ss_pred Eeeeccceeeeeeccc----CCCCcCCCCccEEEEeeCCEE-----ecCCceEEEecCCCCCCEEEEEEEEeCCCC--cE
Q psy6361 10 AMLLDLIPMHSRYNYT----NLPQSRNPGQVIKRYLKDLLY-----VTRNGSFVINNIAEKDTNVYTCTVSNAAGS--TS 78 (148)
Q Consensus 10 ~~~g~~~~l~C~~~~~----~~p~~~~~~~~~v~W~~~~~~-----~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~--~~ 78 (148)
+..|+.+.|.|.+.+. |.| .+.|++++.. ......|.|..+..+|.|.|+|.+.|..+. .+
T Consensus 135 ~~~G~~v~L~C~~~~~~~~~p~p--------~v~W~~~~~~~~~~~~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~ 206 (214)
T 2zg1_A 135 LESGRPTRLSCSLPGSCEAGPPL--------TFSWTGNALSPLDPETTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTE 206 (214)
T ss_dssp CCTTCCEEEEEECTTCCSCSSCC--------EEEEESSTTSSSCSSCCCSSEEEECCCTTCCSCEEEEEEECC----CCE
T ss_pred ccCCCeEEEEEEeccCCCCCCCc--------eEEEeCCCCccCCCCceeEEEEEEecccHHcCcEEEEEEEeCCCCcceE
Confidence 4568999999999875 445 7999998621 134578999999999999999999997644 34
Q ss_pred EEEEE
Q psy6361 79 KTIQM 83 (148)
Q Consensus 79 ~~~~l 83 (148)
..+.|
T Consensus 207 ~~v~l 211 (214)
T 2zg1_A 207 RTVQL 211 (214)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 44443
No 447
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=98.79 E-value=7e-09 Score=59.45 Aligned_cols=66 Identities=11% Similarity=0.155 Sum_probs=46.1
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EE--------------------ecCCceEEEecCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LY--------------------VTRNGSFVINNIAE 60 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~--------------------~~~~~~l~i~~~~~ 60 (148)
....+..|+.+.|.|.+.+.+.. .+.....+.||+.. .. ......|.|.+++.
T Consensus 9 ~~v~v~~G~~v~L~C~~~~~~~~--~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 86 (114)
T 1eeq_A 9 DSLAVSLGERATINCKSSQSVLD--SSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQA 86 (114)
T ss_dssp SEEEECTTSCEEEEEEESSCCEE--TTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred CeEEEcCCCeEEEEEEcCCCccc--cccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecCCEEEEEECCCCc
Confidence 45688999999999999876530 00000159999852 10 01123699999999
Q ss_pred CCCEEEEEEEEeC
Q psy6361 61 KDTNVYTCTVSNA 73 (148)
Q Consensus 61 ~d~g~y~C~~~~~ 73 (148)
+|+|.|.|.+.+.
T Consensus 87 ~DsG~Y~C~~~~~ 99 (114)
T 1eeq_A 87 EDVAVYYCQQYYS 99 (114)
T ss_dssp GGCEEEEEEECSS
T ss_pred ccCEEEEEEEeeC
Confidence 9999999998764
No 448
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=98.79 E-value=4.5e-09 Score=60.25 Aligned_cols=61 Identities=11% Similarity=0.181 Sum_probs=45.9
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-------------EE--e----cCCceEEEecCCCCCCEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-------------LY--V----TRNGSFVINNIAEKDTNVY 66 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-------------~~--~----~~~~~l~i~~~~~~d~g~y 66 (148)
....+..|+.+.|.|.+.+.+.+. ..+.||++. +. . .....|.|.++..+|+|.|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~------~~v~W~r~~~g~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y 81 (113)
T 1sq2_N 8 RSVTKETGESLTINCVLRDASYAL------GSTCWYRKKSGEGNEESISKGGRYVETVNSGSKSFSLRINDLTVEDGGTY 81 (113)
T ss_dssp SEEEECTTCCEEEEEEECSCSSCC------CCEEEEEEETTSCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred ccEEEecCCCEEEEEEECCCcCCC------CEEEEEEeCCCCCceEeEEeCCCEEEEEeCCCCEEEEEECCCChhhCEEE
Confidence 456789999999999998765210 159999862 01 0 1234799999999999999
Q ss_pred EEEEEe
Q psy6361 67 TCTVSN 72 (148)
Q Consensus 67 ~C~~~~ 72 (148)
.|.+.+
T Consensus 82 ~C~~~~ 87 (113)
T 1sq2_N 82 RCGLGV 87 (113)
T ss_dssp EEEECB
T ss_pred EEEEEe
Confidence 999887
No 449
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=98.79 E-value=1.6e-08 Score=59.09 Aligned_cols=62 Identities=13% Similarity=0.151 Sum_probs=47.6
Q ss_pred ceeeeEeeeccceeeeeeccc-CCCCcCCCCccEEEEeeCC------EEe-------------------cCCceEEEecC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYT-NLPQSRNPGQVIKRYLKDL------LYV-------------------TRNGSFVINNI 58 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~-~~p~~~~~~~~~v~W~~~~------~~~-------------------~~~~~l~i~~~ 58 (148)
.....+..|+++.|.|.+.+. +.+ .+.||+++ ... .....|.|.++
T Consensus 10 p~~~~v~~G~~vtL~C~~~~~~~~~--------~v~W~r~~~~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v 81 (127)
T 2jju_A 10 EKSVSVAAGESATLRCAMTSLIPVG--------PIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNI 81 (127)
T ss_dssp CSEEEEETTSCEEECCEESCCCSCC--------CEEEEECSSTTCEEEEESSSSCCTTEEEC-------CCBCCEEECSC
T ss_pred CCeEEEeCCCCEEEEEEEeCCCCCC--------EEEEEecCCCCcEEEEECCCCccCcEEeeEeeeecCCCEEEEEECCC
Confidence 346789999999999999875 333 59999864 000 11457999999
Q ss_pred CCCCCEEEEEEEEeCC
Q psy6361 59 AEKDTNVYTCTVSNAA 74 (148)
Q Consensus 59 ~~~d~g~y~C~~~~~~ 74 (148)
+.+|+|.|.|.+.+..
T Consensus 82 ~~~DsG~Y~C~~~~~~ 97 (127)
T 2jju_A 82 TPADAGTYYCVKFRKG 97 (127)
T ss_dssp CGGGCEEEEEEEEECC
T ss_pred CHHHCEEEEEEEEcCC
Confidence 9999999999988753
No 450
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=98.78 E-value=1.1e-08 Score=58.53 Aligned_cols=65 Identities=14% Similarity=0.161 Sum_probs=45.8
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E-E-------------------ecCCceEEEecCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L-Y-------------------VTRNGSFVINNIAE 60 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~-~-------------------~~~~~~l~i~~~~~ 60 (148)
....+..|+.+.|.|.+.+.+.. +.....+.||+.. . . ......|.|.+++.
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~---~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~ 85 (113)
T 1dlf_L 9 LSLPVSLGNQASISCRSSQSLVH---SNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEA 85 (113)
T ss_dssp SEEEECTTCCEEEEEEESSCCBC---TTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCG
T ss_pred CEEEEcCCCCEEEEEEccccccc---cCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCh
Confidence 45788999999999999876520 0000159999852 0 0 01123699999999
Q ss_pred CCCEEEEEEEEeC
Q psy6361 61 KDTNVYTCTVSNA 73 (148)
Q Consensus 61 ~d~g~y~C~~~~~ 73 (148)
+|+|.|.|.+.+.
T Consensus 86 ~DsG~Y~C~~~~~ 98 (113)
T 1dlf_L 86 EDLGVYFCSQSTH 98 (113)
T ss_dssp GGCEEEEEEECSS
T ss_pred HHCEEEEEEEecC
Confidence 9999999998764
No 451
>2nw2_A ELS4 TCR alpha chain; T cell receptor, immune system; 1.40A {Homo sapiens} PDB: 2nx5_D 4dzb_A
Probab=98.78 E-value=2.6e-08 Score=62.79 Aligned_cols=101 Identities=10% Similarity=0.119 Sum_probs=62.3
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EEe---------------------cCCceEEEecC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LYV---------------------TRNGSFVINNI 58 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~~---------------------~~~~~l~i~~~ 58 (148)
.....+..|+.+.|.|.+.+...+ .+.||+.. ... .....|.|.++
T Consensus 6 p~~~~v~~G~~vtL~C~~s~~~~~--------~v~Wyrq~~g~~~~~l~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~ 77 (200)
T 2nw2_A 6 PTEMTATEGAIVQINCTYQTSGFN--------GLFWYQQHAGEAPTFLSYNVLDGLEEKGRFSSFLSRSKGYSYLLLKEL 77 (200)
T ss_dssp CSEEEEETTCCEEEEEECCCSSCC--------CEEEEEECTTSCCEEEEEECSSEEEEETTEEEEEETTTTEEEEEECSC
T ss_pred CCeEEEccCCCEEEEEEECCCCCc--------eEEEEEeCCCCCcEEEEEEcCCCcccCCceEEEecCCCCEEEEEECcc
Confidence 345678999999999998776544 48998853 000 01237999999
Q ss_pred CCCCCEEEEEEEEeC--CCC--cEEEEEEEEecC-----CEEEeCCCceEEEecCCcEEEEeeeecccCC
Q psy6361 59 AEKDTNVYTCTVSNA--AGS--TSKTIQMNVLVP-----PFFKDEQQESVAIVVNHPMNISCSHYGVPTP 119 (148)
Q Consensus 59 ~~~d~g~y~C~~~~~--~~~--~~~~~~l~v~~~-----p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~ 119 (148)
+.+|+|.|.|.+.+. ... ......|.|... |.+... .. ....+.+.|.+.+..+.
T Consensus 78 ~~~Dsg~Y~C~~~~~~~~~~~~fg~gt~L~V~~~~~~~~P~V~~~-----~~-~~~~~tl~Cl~~gf~P~ 141 (200)
T 2nw2_A 78 QMKDSASYLCAVQASGGSYIPTFGRGTSLIVHPYIQNPDPAVYQL-----RD-SKSSDKSVCLFTDFDSQ 141 (200)
T ss_dssp CGGGCEEEEEEEC---CCCCCEECCCEEEEEECCCSSCCCEEEEE-----EE-CC--CCEEEEEESCCTT
T ss_pred CcccCCcEEEEEEcCCcceeeeeCCCEEEEEecCcccCCCeEEEc-----CC-CCCCceEEEEeecccCC
Confidence 999999999998651 111 112346666532 222211 11 12268899999886443
No 452
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=98.78 E-value=2.3e-08 Score=59.08 Aligned_cols=78 Identities=13% Similarity=0.064 Sum_probs=52.7
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeC---C---E------------EecCCceEEEecCCCCCCEEEEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKD---L---L------------YVTRNGSFVINNIAEKDTNVYTC 68 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~---~---~------------~~~~~~~l~i~~~~~~d~g~y~C 68 (148)
...+..|+.+.|.|.+.+.. + .+.||+. + . .......|.|.++..+|+|.|+|
T Consensus 27 ~~~v~~G~svtL~C~~s~~~-~--------~v~Wyrq~~~g~~~~~l~~~~~rf~~~~~~~~~~L~I~~~~~~Dsg~Y~C 97 (134)
T 3kg5_A 27 FIARKRGFTVKMHCYMNSAS-G--------NVSWLWKQEMDENPQQLKLEKGRMEESQNESLATLTIQGIRFEDNGIYFC 97 (134)
T ss_dssp EEEEETTCCEEEEEECCCTT-C--------CCEEEEESSSSSCCEECCCCTTTEEEEECSSEEEEEECSCCTTTCEEEEE
T ss_pred EEEEeCCCCEEEEEEECCCC-c--------eEEEEEECCCCCCcEEEEEECCeEEEEccCCEEEEEECCCCcCcCEEEEE
Confidence 46788999999999997652 3 4889987 2 1 11234579999999999999999
Q ss_pred EEEeCCC-C--cEEEEEEEEecCCEEEe
Q psy6361 69 TVSNAAG-S--TSKTIQMNVLVPPFFKD 93 (148)
Q Consensus 69 ~~~~~~~-~--~~~~~~l~v~~~p~~~~ 93 (148)
.+.+..+ . ......|.|...|....
T Consensus 98 ~~~~~~~~~~~fg~GT~L~V~~~p~~~~ 125 (134)
T 3kg5_A 98 QQKCNNTSEVYQGCGTELRVMGFSTLAQ 125 (134)
T ss_dssp EEECTTTCCEEECCCEEEEEECC-----
T ss_pred EEEcCCCCceEECCCEEEEEecCCCHHH
Confidence 9887532 1 23345677765555443
No 453
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=98.78 E-value=3.3e-09 Score=60.26 Aligned_cols=61 Identities=11% Similarity=0.234 Sum_probs=46.0
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-------------EEe------cCCceEEEecCCCCCCEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-------------LYV------TRNGSFVINNIAEKDTNVY 66 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-------------~~~------~~~~~l~i~~~~~~d~g~y 66 (148)
....+..|+.+.|.|.+.+...+. ..+.||++. +.. .....|.|.++..+|+|.|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~------~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y 81 (108)
T 2coq_A 8 RIATKETGESLTINCVLRDTACAL------DSTNWYRTKLGSTKEQTISIGGRYSETVDEGSNSASLTIRDLRVEDSGTY 81 (108)
T ss_dssp SEEEECTTCCEEEEEEECCSSEEE------EEEEEEEEETTCCCEEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred ceEEEcCCCCEEEEeEeCCCcCCC------CEEEEEEcCCCCCcEEEEEeCCceEEEEcCCCCEEEEEECCCCcccCEEE
Confidence 456788999999999998764110 169999862 010 1235799999999999999
Q ss_pred EEEEEe
Q psy6361 67 TCTVSN 72 (148)
Q Consensus 67 ~C~~~~ 72 (148)
.|.+.+
T Consensus 82 ~C~~~~ 87 (108)
T 2coq_A 82 KCKAYR 87 (108)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999887
No 454
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.77 E-value=1.1e-08 Score=65.98 Aligned_cols=71 Identities=10% Similarity=0.037 Sum_probs=51.3
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEee--CCE---E--------------------ecCCceEEEecCCCCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLK--DLL---Y--------------------VTRNGSFVINNIAEKD 62 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~--~~~---~--------------------~~~~~~l~i~~~~~~d 62 (148)
..+..|+.+.|.|.+.+.+.| .+.|+| ++. . ......|.|.++..+|
T Consensus 145 ~~v~~G~~v~L~C~~~~~~~~--------~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 216 (247)
T 2ghw_B 145 LSLSPGERATLSCRASQSVRS--------NLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPED 216 (247)
T ss_dssp EEECTTSCEEEEEEESSCCTT--------CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGG
T ss_pred EEecCCCcEEEEEEeCCCccc--------eEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHH
Confidence 457789999999999998877 599999 331 0 0112369999999999
Q ss_pred CEEEEEEEEeCCCC-cEEEEEEEEe
Q psy6361 63 TNVYTCTVSNAAGS-TSKTIQMNVL 86 (148)
Q Consensus 63 ~g~y~C~~~~~~~~-~~~~~~l~v~ 86 (148)
+|.|+|.+.+.... ......|.|.
T Consensus 217 ~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 217 FAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC
T ss_pred CEEEEEEEccCCCceEcCCEEEEEC
Confidence 99999999875433 2233455554
No 455
>1kgc_D T-cell receptor alpha chain; LC13 clone, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1mi5_D 3kpr_D 3kps_D 3o6f_C 3t0e_C 3pqy_D 2esv_D 3dxa_D 3dx9_A
Probab=98.76 E-value=6.3e-09 Score=65.88 Aligned_cols=102 Identities=10% Similarity=0.160 Sum_probs=65.2
Q ss_pred eeeeEeeeccceeeeeecc-cCCCCcCCCCccEEEEeeCC-----E--------------E-e-----cCCceEEEecCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNY-TNLPQSRNPGQVIKRYLKDL-----L--------------Y-V-----TRNGSFVINNIA 59 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~-~~~p~~~~~~~~~v~W~~~~-----~--------------~-~-----~~~~~l~i~~~~ 59 (148)
....+..|+.+.|.|.+.+ .... .+.||+.. . . . .....|.|.+++
T Consensus 7 ~~~~v~~G~~v~L~C~~s~~~~~~--------~v~Wyrq~~g~~~~~l~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~ 78 (206)
T 1kgc_D 7 NSMESNEEEPVHLPCNHSTISGTD--------YIHWYRQLPSQGPEYVIHGLTSNVNNRMASLAIAEDRKSSTLILHRAT 78 (206)
T ss_dssp SEEEEETTSCEEEEEEESCCCTTC--------CEEEEEECTTSCCEEEEEESSSSEECSSEEEEECTTSSEEEEEESSCC
T ss_pred CeEEEcCCCCEEEEEEEcCCCCCc--------cEEEEEECCCCCcEEEEEECCCCccCCCEEEEEcCCCCEEEEEECCCC
Confidence 4567899999999999976 3322 48998853 0 0 0 012379999999
Q ss_pred CCCCEEEEEEEEeCC------CCcEEEEEEEEec-----CCEEEeCCCceEEEecCCcEEEEeeeec-ccCCeE
Q psy6361 60 EKDTNVYTCTVSNAA------GSTSKTIQMNVLV-----PPFFKDEQQESVAIVVNHPMNISCSHYG-VPTPDF 121 (148)
Q Consensus 60 ~~d~g~y~C~~~~~~------~~~~~~~~l~v~~-----~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~~~ 121 (148)
.+|+|.|.|.+.+.. ........|.|.. .|.+... .. ....+.|.|.+.| .|.+.+
T Consensus 79 ~~Dsg~Y~C~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~-~~-----~~~~v~L~C~~~g~~P~~~V 146 (206)
T 1kgc_D 79 LRDAAVYYCILPLAGGTSYGKLTFGQGTILTVHPNIQNPDPAVYQL-RD-----SKSSDKSVCLFTDFDSQTNV 146 (206)
T ss_dssp GGGCEEEEEECCCCSTTCCCCCCCCCCEEEEEECCCSSCCCEEEEC-CC-----CTTCCCEEEEEESCCTTCCC
T ss_pred cccCccEEEEEecccCCCcccceECCCEEEEEeCCCCCCCCeEEee-cC-----CCCCeEEEEEeeceeccccc
Confidence 999999999987631 1111234666653 2333322 11 1236899999877 577655
No 456
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.76 E-value=2.5e-09 Score=61.38 Aligned_cols=55 Identities=13% Similarity=0.132 Sum_probs=44.3
Q ss_pred EEEEecCC-EEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceE
Q psy6361 82 QMNVLVPP-FFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYI 137 (148)
Q Consensus 82 ~l~v~~~p-~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~ 137 (148)
.|.|..+| .+... +.+..+.+|+.+.|.|.+.+.|.|.+.|||||..+....++.
T Consensus 6 ~l~V~~~p~~~~~~-~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~ 61 (115)
T 2cr6_A 6 SGLVQGRRVHIIED-LEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNE 61 (115)
T ss_dssp CCCCCSSCCEEEEC-CCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCC
T ss_pred EEEEcCCCCeEecc-CccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEE
Confidence 34555444 67666 778899999999999999999999999999999987665443
No 457
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.75 E-value=1.5e-08 Score=63.87 Aligned_cols=59 Identities=10% Similarity=0.051 Sum_probs=46.0
Q ss_pred eeccceeeeeecc-cCCCCcCCCCccEEEEeeCCEEecCC------------------ceEEEecCCCCCCEEEEEEEEe
Q psy6361 12 LLDLIPMHSRYNY-TNLPQSRNPGQVIKRYLKDLLYVTRN------------------GSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 12 ~g~~~~l~C~~~~-~~~p~~~~~~~~~v~W~~~~~~~~~~------------------~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
.|+.+.|.|.+.+ .|.|. .+.|++++...... ..|.|.++..+|+|.|+|.+.|
T Consensus 126 ~g~~~~l~C~~~g~~p~~~-------~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n 198 (213)
T 3d9a_L 126 TSGGASVVCFLNNFYPKDI-------NVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATH 198 (213)
T ss_dssp HTTEEEEEEEEEEEBSSCC-------EEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEEC
T ss_pred CCCcEEEEEEEeeecCCce-------EEEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEE
Confidence 4778999999987 44443 69999998432221 2799999999999999999999
Q ss_pred CCCCc
Q psy6361 73 AAGST 77 (148)
Q Consensus 73 ~~~~~ 77 (148)
.....
T Consensus 199 ~~~~~ 203 (213)
T 3d9a_L 199 KTSTS 203 (213)
T ss_dssp TTCSS
T ss_pred ccCCC
Confidence 87653
No 458
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=98.74 E-value=3e-08 Score=57.18 Aligned_cols=62 Identities=13% Similarity=0.184 Sum_probs=47.1
Q ss_pred ceeeeEeeeccceeeeeeccc-CCCCcCCCCccEEEEeeCC----EEe---------------------cCCceEEEecC
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYT-NLPQSRNPGQVIKRYLKDL----LYV---------------------TRNGSFVINNI 58 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~-~~p~~~~~~~~~v~W~~~~----~~~---------------------~~~~~l~i~~~ 58 (148)
.....+..|+.+.|.|.+.+. +.+ .+.|||++ ... .....|.|.++
T Consensus 14 p~~~~~~~G~~v~L~C~~~~~~~~~--------~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v 85 (120)
T 2yz1_A 14 EKSVSVAAGDSTVLNCTLTSLLPVG--------PIKWYRGVGQSRLLIYSFTGEHFPRVTNVSDATKRNNMDFSIRISNV 85 (120)
T ss_dssp SSEEEECTTCCEEECCEESCCCSCC--------CEEEEESSSTTCEEEEEECEECTTTCCSEEECCBSSTTBCCEEECSC
T ss_pred CceEEEeCCCCEEEEeEECCCCCCc--------EEEEEcCCCCCcEEEEEcCCcccCcccceeeccccCCCeEEEEECCC
Confidence 345778999999999999875 333 59999974 000 11247999999
Q ss_pred CCCCCEEEEEEEEeCC
Q psy6361 59 AEKDTNVYTCTVSNAA 74 (148)
Q Consensus 59 ~~~d~g~y~C~~~~~~ 74 (148)
+.+|+|.|.|.+.+..
T Consensus 86 ~~~DsG~Y~C~~~~~~ 101 (120)
T 2yz1_A 86 TPEDAGTYYCVKFQKG 101 (120)
T ss_dssp CGGGCEEEEEEEEECC
T ss_pred CHHHCEEEEEEEEcCC
Confidence 9999999999988753
No 459
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=98.74 E-value=1.8e-08 Score=56.88 Aligned_cols=54 Identities=24% Similarity=0.473 Sum_probs=37.5
Q ss_pred EEEEecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCce
Q psy6361 82 QMNVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHY 136 (148)
Q Consensus 82 ~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~ 136 (148)
.+.+..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+++|..+.....+
T Consensus 4 ~v~~~~~P~~~~~-~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~ 57 (108)
T 3kvq_A 4 TVLERVAPTITGN-LENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGI 57 (108)
T ss_dssp -------CCCBSC-CCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTE
T ss_pred eECccCCCceecC-CCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCe
Confidence 4555678888877 78889999999999999999999999999999888765444
No 460
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.73 E-value=4e-08 Score=56.17 Aligned_cols=57 Identities=14% Similarity=0.145 Sum_probs=46.1
Q ss_pred CCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCC----------ceEEE------EEEEEeec
Q psy6361 88 PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQS----------HYITF------FLFFQRLL 147 (148)
Q Consensus 88 ~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~----------~~~~~------~l~~~~~~ 147 (148)
+|.+... +.+..+.+|+.+.|.|.+.+ .|.+.|||||++|..+. ++... .|.|+.+.
T Consensus 8 ~~~~~~~-l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~ 80 (112)
T 2e6q_A 8 TARLVAG-LEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVK 80 (112)
T ss_dssp CCCEEEC-CCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCC
T ss_pred CcEEecC-CCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCC
Confidence 4567777 78899999999999999987 67899999999998876 55532 57777653
No 461
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.73 E-value=3.5e-09 Score=68.96 Aligned_cols=59 Identities=12% Similarity=0.090 Sum_probs=46.6
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEee--CCE---E--------------------ecCCceEEEecCCCCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLK--DLL---Y--------------------VTRNGSFVINNIAEKD 62 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~--~~~---~--------------------~~~~~~l~i~~~~~~d 62 (148)
..+..|+.+.|.|.+.+.+.| .+.|+| ++. . ......|.|.++..+|
T Consensus 149 ~~v~~G~~v~L~C~~~~~~~~--------~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 220 (257)
T 1f3r_B 149 LSASVGDRVTLSCKGSQNINN--------YLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPED 220 (257)
T ss_dssp ECCCTTCCEEEEEECSSCCBT--------CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGG
T ss_pred EEEcCCCCEEEEEEECCcCCC--------cEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhh
Confidence 457789999999999988777 599999 431 0 0122479999999999
Q ss_pred CEEEEEEEEeCC
Q psy6361 63 TNVYTCTVSNAA 74 (148)
Q Consensus 63 ~g~y~C~~~~~~ 74 (148)
+|.|+|.+.|..
T Consensus 221 ~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 221 VATYFCYQYNNG 232 (257)
T ss_dssp CSEEEEEEESSS
T ss_pred CEEEEEEEeCCC
Confidence 999999999864
No 462
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=98.73 E-value=1.4e-08 Score=60.60 Aligned_cols=73 Identities=10% Similarity=0.047 Sum_probs=51.4
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E--------------------EecCCceEEEecCCC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L--------------------YVTRNGSFVINNIAE 60 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~--------------------~~~~~~~l~i~~~~~ 60 (148)
....+..|+++.|.|.+.....+ .+.||+.. . .......|.|.+++.
T Consensus 8 ~~v~v~~G~~vtL~C~~s~~~~~--------~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~l~~ 79 (143)
T 3u6r_L 8 ATLSLSPGERATLSCRASQSVNK--------YLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISNLEP 79 (143)
T ss_dssp SEEEECTTCCEEEEEEESSCCTT--------CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCG
T ss_pred CEEEEeCCCCEEEEEEECCCCce--------eeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEccCCEEEEEEccCcc
Confidence 34678899999999999876543 58999852 0 011234799999999
Q ss_pred CCCEEEEEEEEeCCCCcEEEEEEEEe
Q psy6361 61 KDTNVYTCTVSNAAGSTSKTIQMNVL 86 (148)
Q Consensus 61 ~d~g~y~C~~~~~~~~~~~~~~l~v~ 86 (148)
+|+|.|+|.+.+..........|.|.
T Consensus 80 ~DsG~Y~C~~~~~~~~fg~gt~L~V~ 105 (143)
T 3u6r_L 80 EDFAVYYCQQRSDWVTFGGGTKVEIK 105 (143)
T ss_dssp GGCEEEEEEECSSBCEECCCEEEEEC
T ss_pred cCCEEEEEEEecCCCEECCCEEEEEC
Confidence 99999999987653122233456654
No 463
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.73 E-value=2.2e-08 Score=65.24 Aligned_cols=76 Identities=12% Similarity=0.114 Sum_probs=52.4
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEee--CCE-E----------------------ecCCceEEEecCCCCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLK--DLL-Y----------------------VTRNGSFVINNIAEKD 62 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~--~~~-~----------------------~~~~~~l~i~~~~~~d 62 (148)
..+..|+.+.|.|.+.+.+.|.. ....+.|+| ++. . ......|.|.++..+|
T Consensus 131 ~~v~~G~~v~L~C~~~~~~~~~~---~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 207 (256)
T 1nqb_A 131 LPVSLGDQASISCRSSQSIVHSN---GNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAED 207 (256)
T ss_dssp EEECTTCCEEEEEEESSCCBCTT---SCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred EEEecCCcEEEEeEecCcccccc---cceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHH
Confidence 45788999999999998876400 001599999 431 0 0122469999999999
Q ss_pred CEEEEEEEEeCCCC-cEEEEEEEEe
Q psy6361 63 TNVYTCTVSNAAGS-TSKTIQMNVL 86 (148)
Q Consensus 63 ~g~y~C~~~~~~~~-~~~~~~l~v~ 86 (148)
+|.|+|.+.+.... ......|.|.
T Consensus 208 sG~Y~C~a~~~~~~~fg~gt~l~V~ 232 (256)
T 1nqb_A 208 LGVYYCFQGSHVPYTFGGGTKLEIK 232 (256)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC
T ss_pred CEEEEEEEccCCceEECCCEEEEEE
Confidence 99999999875433 3334566665
No 464
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=98.72 E-value=9.4e-09 Score=60.08 Aligned_cols=64 Identities=8% Similarity=0.089 Sum_probs=47.2
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC--------------EE---e--cCCceEEEecCCCCCCEEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL--------------LY---V--TRNGSFVINNIAEKDTNVY 66 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~--------------~~---~--~~~~~l~i~~~~~~d~g~y 66 (148)
....+..|+++.|.|.+.+...+. ..+.||+.. .. . .....|.|.+++.+|+|.|
T Consensus 8 ~~v~v~~G~svtL~C~~s~~~~~~------~~v~Wyrq~~g~~~~~li~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y 81 (126)
T 3moq_A 8 RTATKETGESLTINCVLRDASFEL------KDTGWYRTKLGSTNEQSISIGGRYVETVNKGSKSFSLRISDLRVEDSGTY 81 (126)
T ss_dssp SEEEEETTCCEEEEEEEESCSSCC------CEEEEEEEETTCCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred ceEEEeCCCCEEEEEEeecCccCC------ceEEEEEeCCCCCceEEEEeCCcEEEEEeCCCCEEEEEECcCChHhCEEE
Confidence 456788999999999998763211 169999952 00 0 1245799999999999999
Q ss_pred EEEEEeCCC
Q psy6361 67 TCTVSNAAG 75 (148)
Q Consensus 67 ~C~~~~~~~ 75 (148)
+|.+.+...
T Consensus 82 ~C~~~~~~~ 90 (126)
T 3moq_A 82 KCQAFYVFF 90 (126)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEcCC
Confidence 999887543
No 465
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.72 E-value=1.3e-08 Score=65.22 Aligned_cols=59 Identities=10% Similarity=0.224 Sum_probs=47.1
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E----------------E-e-----cCCceEEEecCCC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L----------------Y-V-----TRNGSFVINNIAE 60 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~----------------~-~-----~~~~~l~i~~~~~ 60 (148)
..+..|+.+.|.|.+.+.+.| .+.|+|++ . . . .....|.|.++..
T Consensus 137 ~~v~~G~~v~L~C~~~~~p~~--------~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 208 (238)
T 2p1y_A 137 LTVWEGETAILNCSYENSAFD--------YFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQP 208 (238)
T ss_dssp EEEETTSCEEEEEECCCTTCC--------EEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCG
T ss_pred EEEeCCCeEEEEEEEecCCCC--------cEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCH
Confidence 467889999999999988877 69999952 0 0 0 0124799999999
Q ss_pred CCCEEEEEEEEeCC
Q psy6361 61 KDTNVYTCTVSNAA 74 (148)
Q Consensus 61 ~d~g~y~C~~~~~~ 74 (148)
+|+|.|+|.+.|..
T Consensus 209 ~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 209 GDSATYFCAAIDTN 222 (238)
T ss_dssp GGCEEEEEEEEETT
T ss_pred HHCEEEEEEEeeCC
Confidence 99999999999873
No 466
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.72 E-value=2e-08 Score=65.21 Aligned_cols=73 Identities=8% Similarity=0.071 Sum_probs=52.2
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----EE--------------------ecCCceEEEecCCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----LY--------------------VTRNGSFVINNIAEK 61 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~~--------------------~~~~~~l~i~~~~~~ 61 (148)
...+..|+.+.|.|.+.+.+.|. .+.|+|.. .. ......|.|.+++.+
T Consensus 150 ~~~v~~G~~v~L~C~~~~~~~~~-------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 222 (257)
T 3gkz_A 150 IMSASPGEKVTLTCSASSSVSSS-------HLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAE 222 (257)
T ss_dssp EEEECTTCCEEEEEEESSCCCGG-------GEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eEEEeCCCcEEEEEEEccCccce-------EEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChH
Confidence 45678899999999999876652 49999842 10 012235999999999
Q ss_pred CCEEEEEEEEeCCCC-cEEEEEEEEe
Q psy6361 62 DTNVYTCTVSNAAGS-TSKTIQMNVL 86 (148)
Q Consensus 62 d~g~y~C~~~~~~~~-~~~~~~l~v~ 86 (148)
|+|.|+|.+.+.... ......|.|.
T Consensus 223 D~G~Y~C~~~~~~~~~fg~gt~l~v~ 248 (257)
T 3gkz_A 223 DAASYFCHQWSSFPFTFGSGTKLEIK 248 (257)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred HCEEEEEEEccCCceEEcCCEEEEEE
Confidence 999999999875433 3334556665
No 467
>2jjs_C Leukocyte surface antigen CD47; signal regulatory protein alpha, immunoglobulin superfamily, transmembrane, phosphoprotein, paired receptor; HET: NAG; 1.85A {Homo sapiens} PDB: 2jjt_C* 2vsc_A*
Probab=98.72 E-value=6e-08 Score=56.31 Aligned_cols=84 Identities=15% Similarity=0.175 Sum_probs=58.2
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCEEe---------------------------cCCceEEEecC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYV---------------------------TRNGSFVINNI 58 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~~~---------------------------~~~~~l~i~~~ 58 (148)
..+....++++.|.|.+...+.. +...+.|.|++++... .++.+|.|.++
T Consensus 9 ~~~~t~~n~~vtLpC~l~~~~~~---~~~~m~V~W~~~~~~i~~~~G~~~~~~q~~~~~~a~l~~~~l~~GnaSL~i~~v 85 (127)
T 2jjs_C 9 SVEFTFGNDTVVIPCFVTNMEAQ---NTTEVYVKWKFKGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKS 85 (127)
T ss_dssp EEEECTTCSEEEECCBBSSCCCS---SGGGEEEEEEETTEEEEEEEGGGTEEECCGGGTTCBCCGGGGGGTBCCEEEEHH
T ss_pred eEEEEecCCCEEEEEEeCCcCCC---CcceEEEEEEECCeEeEeeCCceeeccccccccceEechhhhccCcEEEEEccc
Confidence 34667788999999998754332 1122479999987111 11268999999
Q ss_pred CC-CCCEEEEEEEEeCCCCcEEEEEEEEecCCEEE
Q psy6361 59 AE-KDTNVYTCTVSNAAGSTSKTIQMNVLVPPFFK 92 (148)
Q Consensus 59 ~~-~d~g~y~C~~~~~~~~~~~~~~l~v~~~p~~~ 92 (148)
+. +|+|.|+|.+..........+.|.+...+.++
T Consensus 86 ~~~sD~G~YtC~v~~~~~~~~~~i~Lkv~~~~~~~ 120 (127)
T 2jjs_C 86 DAVSHTGNYTCEVTELTREGETIIELKYRVVSWST 120 (127)
T ss_dssp HHHTSCEEEEEEEEETTEEEEEEEEEEECCC----
T ss_pred ccccCCcEEEEEEEeCCceEEEEEEEEEEeccccC
Confidence 98 69999999999877666777777776555444
No 468
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.71 E-value=8.3e-08 Score=55.09 Aligned_cols=59 Identities=14% Similarity=0.470 Sum_probs=47.6
Q ss_pred cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeec-CCceEEE-------EEEEEee
Q psy6361 87 VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRI-QSHYITF-------FLFFQRL 146 (148)
Q Consensus 87 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~-~~~~~~~-------~l~~~~~ 146 (148)
.+|.|... +....+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ..++... .|.|..+
T Consensus 14 ~~p~f~~~-p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 80 (116)
T 2kkq_A 14 RAPMFIYK-PQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDV 80 (116)
T ss_dssp BCCCBSSC-CCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEE
T ss_pred CCCeEEeC-CCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCC
Confidence 56788877 8889999999999999999999999999999999874 3343322 5777665
No 469
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=98.71 E-value=5.6e-08 Score=54.71 Aligned_cols=50 Identities=26% Similarity=0.479 Sum_probs=43.3
Q ss_pred cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceE
Q psy6361 87 VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYI 137 (148)
Q Consensus 87 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~ 137 (148)
.+|.+... +....+.+|+.+.|.|.+.|.|.+.+.|+++|..+....++.
T Consensus 12 ~~P~~~~~-~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~ 61 (107)
T 3irg_B 12 SPPCFLRF-PRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLS 61 (107)
T ss_dssp EEEEEEEC-CCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEE
T ss_pred CCCeeEcC-CccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEE
Confidence 56788877 788899999999999999999999999999999987665543
No 470
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.71 E-value=2.7e-08 Score=64.70 Aligned_cols=60 Identities=13% Similarity=0.256 Sum_probs=46.1
Q ss_pred eeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E--E----------------------ecCCceEEEecC
Q psy6361 8 EQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L--Y----------------------VTRNGSFVINNI 58 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~--~----------------------~~~~~~l~i~~~ 58 (148)
..+..|+.+.|.|.+.+. .| .+.|+|.. . . ......|.|.++
T Consensus 147 ~~v~~G~~v~L~C~~~~~-~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v 217 (256)
T 3tf7_C 147 KVTVTGENVTLSCRQTNS-HN--------YMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESA 217 (256)
T ss_dssp EEEETTCCEEECEEECSC-CS--------EEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSC
T ss_pred EEEeCCCcEEEEEEcCCC-ce--------EEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCC
Confidence 456689999999999876 44 69999842 0 0 112347999999
Q ss_pred CCCCCEEEEEEEEeCCCC
Q psy6361 59 AEKDTNVYTCTVSNAAGS 76 (148)
Q Consensus 59 ~~~d~g~y~C~~~~~~~~ 76 (148)
+.+|+|.|+|.+.|..+.
T Consensus 218 ~~~DsG~Y~C~a~n~~g~ 235 (256)
T 3tf7_C 218 SPSQTSLYFCASSDAPGQ 235 (256)
T ss_dssp CGGGCEEEEEEEEEETTE
T ss_pred CHHHCEEEEEEecCCCCc
Confidence 999999999999887653
No 471
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.70 E-value=3.8e-08 Score=56.39 Aligned_cols=74 Identities=16% Similarity=0.071 Sum_probs=51.6
Q ss_pred eeeeEeeeccceeeeeecccC-CCCcCCCCccEEEEeeCC------------------------EEe------cCCceEE
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTN-LPQSRNPGQVIKRYLKDL------------------------LYV------TRNGSFV 54 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~-~p~~~~~~~~~v~W~~~~------------------------~~~------~~~~~l~ 54 (148)
....+..|+++.|.|.+.... ... .+.|++.. +.. ....+|.
T Consensus 5 ~~v~~~~G~~v~L~C~~~~~~~~~~-------~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~ 77 (115)
T 2or7_A 5 TAVQGLAGHPVTLPCIYSTHLGGIV-------PMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLT 77 (115)
T ss_dssp -CEEEETTSCEEECCBCCHHHHCSC-------CEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEE
T ss_pred cEEEEEcCCCEEEEEEeecCCCCCE-------EEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEE
Confidence 356789999999999987542 111 58899852 000 1134799
Q ss_pred EecCCCCCCEEEEEEEEeCCCCcEEEEEEEEe
Q psy6361 55 INNIAEKDTNVYTCTVSNAAGSTSKTIQMNVL 86 (148)
Q Consensus 55 i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~ 86 (148)
|.+++.+|+|.|.|.+.+........+.|.|.
T Consensus 78 I~~v~~~DsG~Y~C~v~~~~~~~~~~v~L~V~ 109 (115)
T 2or7_A 78 IENTVVGDGGPYCCVVEIPGAFHFVDYMLEVK 109 (115)
T ss_dssp ESSCCGGGCEEEEEEECCTTSCEEEEEEEEEE
T ss_pred EccCCHHHCEEEEEEEECCCceeEEEEEEEEc
Confidence 99999999999999988754444555566554
No 472
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=98.70 E-value=4.4e-08 Score=62.19 Aligned_cols=99 Identities=15% Similarity=0.195 Sum_probs=64.1
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC--------EE-ec------------------CCceEEEecCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL--------LY-VT------------------RNGSFVINNIA 59 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~--------~~-~~------------------~~~~l~i~~~~ 59 (148)
...+..|+.+.|.|.+.+...+ .+.||+.. .. .. ....|.|.+++
T Consensus 12 ~~~v~~G~svtL~C~~s~~~~~--------~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~ 83 (210)
T 2eys_A 12 SLIILEGKNCTLQCNYTVSPFS--------NLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQ 83 (210)
T ss_dssp EEEEETTCCEEEEEEECCSSCC--------EEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCC
T ss_pred EEEEecCCCEEEEEEECCCCCC--------eEEEEEeCCCCCCEEEEEEecCCCCccCCCEEEEEcCCCCEEEEEEccCC
Confidence 4678899999999999876554 58998853 11 01 11379999999
Q ss_pred CCCCEEEEEEEEeCC---CC--cEEEEEEEEecC-----CEEEeCCCceEEEecCCcEEEEeeeecccCC
Q psy6361 60 EKDTNVYTCTVSNAA---GS--TSKTIQMNVLVP-----PFFKDEQQESVAIVVNHPMNISCSHYGVPTP 119 (148)
Q Consensus 60 ~~d~g~y~C~~~~~~---~~--~~~~~~l~v~~~-----p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~ 119 (148)
.+|+|.|+|.+.+.. .. ......|.|... |.+... .. ....+.+.|.+.|..++
T Consensus 84 ~~Dsg~Y~C~~~~~~~~~~~~~fg~gt~L~V~~~~~~~~P~V~~~-~~-----~~~~~tl~Cl~~gf~P~ 147 (210)
T 2eys_A 84 LSDSASYICVVSDRGSTLGRLYFGRGTQLTVWPDIQNPDPAVYQL-RD-----SKSSDKSVCLFTDFDSQ 147 (210)
T ss_dssp GGGCEEEEEEEESCSSTTCCEEECCCEEEEEECCCSSCCCEEEEE-CC-----CSSSSCEEEEEESCCTT
T ss_pred cccCceEEEEEEccCCCcccceECCCEEEEEECCCCCCCCeEEec-CC-----CCCCceEEEEcccccCC
Confidence 999999999988742 11 112346666532 222222 11 12267899999886433
No 473
>2pkd_A SLAM family member 5; signaling lymphocyte activation molecule, IGV, immunoglobulin variable, IGC, immunoglobulin constant, signaling protein; 2.04A {Homo sapiens}
Probab=98.70 E-value=1.4e-07 Score=53.78 Aligned_cols=75 Identities=13% Similarity=0.206 Sum_probs=52.2
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC---------------------------EEecCCceEEEec
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL---------------------------LYVTRNGSFVINN 57 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~---------------------------~~~~~~~~l~i~~ 57 (148)
.....+.+|++|+|.|......... .+.|+... .....+.+|.|.+
T Consensus 6 p~~V~~~~G~sVtL~c~~~~~~~~~-------~i~W~~~~~ia~~~~~~~~~~~~~~~~~~~f~~Rl~l~~~~~SL~I~n 78 (111)
T 2pkd_A 6 IFTVNGILGESVTFPVNIQEPRQVK-------IIAWTSKTSVAYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISD 78 (111)
T ss_dssp CEEEEEETTSCEEECCCCCTTCCEE-------EEEEESSSEEEEEECCCSSSCCEEEECSGGGTTCEEECTTTCCEEECS
T ss_pred ceEEEEEeCCCEEEeCccCCCCeee-------EEEEecCCEEEEEECCCCCCcceeEEeCCCcCCcEEEeCCCEEEEECC
Confidence 4467889999999999875422211 57787331 1112357899999
Q ss_pred CCCCCCEEEEEEEEeCCCC--cEEEEEEEEe
Q psy6361 58 IAEKDTNVYTCTVSNAAGS--TSKTIQMNVL 86 (148)
Q Consensus 58 ~~~~d~g~y~C~~~~~~~~--~~~~~~l~v~ 86 (148)
++.+|+|.|.|.+....+. ....+.|.|.
T Consensus 79 l~~~DsG~Y~c~i~~~~~~~~~~~~~~L~V~ 109 (111)
T 2pkd_A 79 LRMEDAGDYKADINTQADPYTTTKRYNLQIY 109 (111)
T ss_dssp CCGGGCEEEEEEEEESSTTSEEEEEEEEEEE
T ss_pred CCHHHCEEEEEEEEeCCCCceEEEEEEEEEE
Confidence 9999999999998876543 3456666664
No 474
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=98.70 E-value=8.6e-08 Score=64.53 Aligned_cols=74 Identities=16% Similarity=0.226 Sum_probs=55.1
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC--------EEecCCceEEEecCCCCCCEEEEEEEEeCCCCcE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL--------LYVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTS 78 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~--------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 78 (148)
...+..|+++.|.|.+.+.+.+. .+.|++++ ........|.|.++...|+|.|+|.. .+...
T Consensus 15 ~v~~~~G~~v~l~C~~~~~~~~~-------~i~W~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~---~g~~~ 84 (325)
T 1n26_A 15 VLTSLPGDSVTLTCPGVEPEDNA-------TVHWVLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYR---AGRPA 84 (325)
T ss_dssp EEEECTTCCEEEECTTSCTTCCS-------EEEEEEECSSSSCCCEEEEEESSEEEECSCCGGGCEEEEEES---SSSCS
T ss_pred cEECCCCCcEEEEeCCCCCCCCc-------eEEEEECCccCCccccccccccceEEecccchhhCeEeEEEe---CCEEe
Confidence 34456899999999988765322 79999865 12233578999999999999999982 45555
Q ss_pred EEEEEEEecCCE
Q psy6361 79 KTIQMNVLVPPF 90 (148)
Q Consensus 79 ~~~~l~v~~~p~ 90 (148)
..+.|.|..+|.
T Consensus 85 ~~~~L~V~~pP~ 96 (325)
T 1n26_A 85 GTVHLLVDVPPE 96 (325)
T ss_dssp CEEEEEECCCCC
T ss_pred eeEEEEeccCCC
Confidence 667888877664
No 475
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.69 E-value=4.3e-08 Score=53.12 Aligned_cols=49 Identities=24% Similarity=0.291 Sum_probs=39.5
Q ss_pred ceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceEEE------EEEEEee
Q psy6361 97 ESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYITF------FLFFQRL 146 (148)
Q Consensus 97 ~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~~~------~l~~~~~ 146 (148)
....+.+|+.+.|.|.+.+ |.|.+.|+|||..+..+.++... .|.|..+
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~ 58 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGA 58 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSC
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCC
Confidence 4578889999999999966 88899999999999887776543 4666544
No 476
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.69 E-value=3.2e-08 Score=64.26 Aligned_cols=61 Identities=11% Similarity=0.085 Sum_probs=46.5
Q ss_pred eeeEeeeccceeeeeecccCC-CCcCCCCccEEEEeeC--C---EE--------------------ecCCceEEEecCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNL-PQSRNPGQVIKRYLKD--L---LY--------------------VTRNGSFVINNIAE 60 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~-p~~~~~~~~~v~W~~~--~---~~--------------------~~~~~~l~i~~~~~ 60 (148)
...+..|+.+.|.|.+.+.+. | .+.|+|. + .. ......|.|.++..
T Consensus 158 ~~~v~~G~~v~L~C~~~~~~~~~--------~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 229 (256)
T 3juy_B 158 TLSLSPGERATFSCRSSHSIRSR--------RVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEP 229 (256)
T ss_dssp EEEECTTSCEEEEEEESSCCTTC--------CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred eEEEeCCCCEEEEEEECCCcCCe--------eEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCH
Confidence 356788999999999998765 4 5999983 1 10 11223599999999
Q ss_pred CCCEEEEEEEEeCCC
Q psy6361 61 KDTNVYTCTVSNAAG 75 (148)
Q Consensus 61 ~d~g~y~C~~~~~~~ 75 (148)
+|+|.|+|.+.+...
T Consensus 230 ~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 230 EDFALYYCQVYGASS 244 (256)
T ss_dssp GGCSEEEEEECCSSC
T ss_pred hHCEEEEEEEeeCCC
Confidence 999999999988543
No 477
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=98.69 E-value=1.5e-08 Score=57.58 Aligned_cols=60 Identities=10% Similarity=0.115 Sum_probs=45.2
Q ss_pred eeeeEeeeccceeeee-ecccC-CCCcCCCCccEEEEeeCC---E-----------------Ee---c--CCceEEEecC
Q psy6361 6 NVEQAMLLDLIPMHSR-YNYTN-LPQSRNPGQVIKRYLKDL---L-----------------YV---T--RNGSFVINNI 58 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~-~~~~~-~p~~~~~~~~~v~W~~~~---~-----------------~~---~--~~~~l~i~~~ 58 (148)
....+..|+++.|.|. +.+.+ .+ .+.|||.. . .. . ....|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~v~~~~~~~~--------~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 79 (109)
T 1pew_A 8 HSVSESPGKTVTISCTRSSGNIASN--------YVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGL 79 (109)
T ss_dssp SEEEECTTSCEEEEEEESSSCGGGS--------CCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSC
T ss_pred CCEEEcCCCCEEEEEEeCCCCCCCc--------cEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCC
Confidence 4678899999999999 77654 23 58999863 0 00 1 1247999999
Q ss_pred CCCCCEEEEEEEEeC
Q psy6361 59 AEKDTNVYTCTVSNA 73 (148)
Q Consensus 59 ~~~d~g~y~C~~~~~ 73 (148)
+.+|+|.|.|.+.+.
T Consensus 80 ~~~DsG~Y~C~~~~~ 94 (109)
T 1pew_A 80 KTEDEADYYCQSYDA 94 (109)
T ss_dssp CGGGCEEEEEEEEET
T ss_pred ChhhCEEEEEEEEeC
Confidence 999999999998874
No 478
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.68 E-value=4.6e-08 Score=54.72 Aligned_cols=56 Identities=9% Similarity=0.100 Sum_probs=44.9
Q ss_pred CCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceEEE------EEEEEee
Q psy6361 88 PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYITF------FLFFQRL 146 (148)
Q Consensus 88 ~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~~~------~l~~~~~ 146 (148)
+|.+... +.+..+.+|+.+.|.|.+ .|.|.+.|+|||..+....++... .|.|..+
T Consensus 7 p~~~~~~-~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v 68 (100)
T 2yuz_A 7 GLKILTP-LTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANA 68 (100)
T ss_dssp CCCCSBC-CCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSC
T ss_pred CCEEecc-CCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCC
Confidence 4566666 778899999999999999 788999999999999877765533 4666544
No 479
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=98.68 E-value=8.4e-08 Score=54.99 Aligned_cols=59 Identities=10% Similarity=0.147 Sum_probs=44.1
Q ss_pred eeeEeeeccceeeeeeccc---CCCCcCCCCccEEEEeeCC---------E------E--------------ecCCc--e
Q psy6361 7 VEQAMLLDLIPMHSRYNYT---NLPQSRNPGQVIKRYLKDL---------L------Y--------------VTRNG--S 52 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~---~~p~~~~~~~~~v~W~~~~---------~------~--------------~~~~~--~ 52 (148)
...+..|+.+.|.|.+... +.+ .+.||+.. . . ..... .
T Consensus 7 ~~~~~~G~~v~L~C~~~~~~~~~~~--------~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 78 (116)
T 3bj9_1 7 AMSSALGTTIRLTCTLRNDHDIGVY--------SVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGY 78 (116)
T ss_dssp EEEEETTCCEEEEEEECSSSCGGGC--------CEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEE
T ss_pred cEEEcCCCcEEEEEEeecCccCCCc--------eEEEEEeCCCCCcEEEEEEecCCCceeCccCCCcEEEEecCCCceEE
Confidence 4789999999999999754 223 58998842 0 0 00113 7
Q ss_pred EEEecCCCCCCEEEEEEEEeC
Q psy6361 53 FVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~ 73 (148)
|.|.+++.+|+|.|.|.+.+.
T Consensus 79 L~I~~~~~~DsG~Y~C~~~~~ 99 (116)
T 3bj9_1 79 LSISELQPEDEAMYYCAMGAR 99 (116)
T ss_dssp EEECSCCGGGCEEEEEEECCS
T ss_pred EEECCCChhHCEEEEEEEeCC
Confidence 999999999999999998764
No 480
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.68 E-value=4.3e-08 Score=54.45 Aligned_cols=60 Identities=22% Similarity=0.413 Sum_probs=46.4
Q ss_pred ecCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceE---EEEEEEEee
Q psy6361 86 LVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYI---TFFLFFQRL 146 (148)
Q Consensus 86 ~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~---~~~l~~~~~ 146 (148)
..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+++|..+....... ...|.|..+
T Consensus 9 ~~~P~~~~~-~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v 71 (99)
T 2yr3_A 9 EVAPSFSSV-LKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTCEAGVAELHIQDA 71 (99)
T ss_dssp CEEEEEEEC-CCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCEEETTEEEEEECSC
T ss_pred ccCCceeec-CCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceEeeCCeEEEEECCC
Confidence 356778777 778889999999999999999999999999998886544321 234655543
No 481
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=98.13 E-value=2.1e-09 Score=61.28 Aligned_cols=61 Identities=11% Similarity=0.173 Sum_probs=46.7
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC---------------------EE------ecCCceEEEec
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL---------------------LY------VTRNGSFVINN 57 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~---------------------~~------~~~~~~l~i~~ 57 (148)
.....+..|+.+.|.|.+.+.+.+ .+.|++.. +. ......|.|.+
T Consensus 6 p~~v~v~~G~~v~L~C~~~~~~~~--------~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 77 (110)
T 1u3h_A 6 PQSLTVWEGETAILNCSYENSAFD--------YFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIAD 77 (110)
Confidence 445678999999999999876555 58999853 00 01124799999
Q ss_pred CCCCCCEEEEEEEEeC
Q psy6361 58 IAEKDTNVYTCTVSNA 73 (148)
Q Consensus 58 ~~~~d~g~y~C~~~~~ 73 (148)
++.+|+|.|.|.+.+.
T Consensus 78 v~~~DsG~Y~C~~~~~ 93 (110)
T 1u3h_A 78 SQPGDSATYFCAASAN 93 (110)
Confidence 9999999999998764
No 482
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=98.68 E-value=4.1e-08 Score=53.97 Aligned_cols=45 Identities=18% Similarity=0.359 Sum_probs=38.7
Q ss_pred CCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECC--EEeecC
Q psy6361 88 PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDG--SLLRIQ 133 (148)
Q Consensus 88 ~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g--~~l~~~ 133 (148)
+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+++| ..+...
T Consensus 2 ~P~i~~~-~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~ 48 (93)
T 1wit_A 2 KPKILTA-SRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPE 48 (93)
T ss_dssp CCEECCC-CCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTT
T ss_pred CCeEEcC-CCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCc
Confidence 5777666 67788999999999999999999999999999 777554
No 483
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.68 E-value=9.7e-08 Score=59.60 Aligned_cols=64 Identities=6% Similarity=0.045 Sum_probs=44.8
Q ss_pred eeeccceeeeeec-ccCCCCcCCCCccEEEEeeCCEEec---------CC-ceE---EEecCCCCCCEEEEEEEEeCCCC
Q psy6361 11 MLLDLIPMHSRYN-YTNLPQSRNPGQVIKRYLKDLLYVT---------RN-GSF---VINNIAEKDTNVYTCTVSNAAGS 76 (148)
Q Consensus 11 ~~g~~~~l~C~~~-~~~~p~~~~~~~~~v~W~~~~~~~~---------~~-~~l---~i~~~~~~d~g~y~C~~~~~~~~ 76 (148)
..|+.+.|.|.+. +.|.| .+.|++++.... .. ..+ .+..+..+|+|.|+|.+.|..+.
T Consensus 119 ~~g~~~~l~C~~~~g~P~p--------~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~ 190 (201)
T 1dr9_A 119 PTSNIRRIICSTSGGFPEP--------HLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLR 190 (201)
T ss_dssp SSTTEEEEEEEEEEESSCE--------EEEEEESSCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCC
T ss_pred CCCCeEEEEEecCCccCCC--------EEEEEECCEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcce
Confidence 4467789999995 77877 699999872111 12 222 23445678999999999999987
Q ss_pred cEEEEE
Q psy6361 77 TSKTIQ 82 (148)
Q Consensus 77 ~~~~~~ 82 (148)
.+..+.
T Consensus 191 ~s~~~~ 196 (201)
T 1dr9_A 191 VNQTFN 196 (201)
T ss_dssp EEEEEE
T ss_pred eeeEEe
Confidence 665443
No 484
>1ymm_D T cell receptor alpha chain; protein-protein complex, T cell repertoire, auto-immunity, I system; HET: NAG; 3.50A {Homo sapiens} SCOP: b.1.1.1
Probab=98.68 E-value=2.2e-09 Score=68.00 Aligned_cols=101 Identities=13% Similarity=0.170 Sum_probs=46.1
Q ss_pred eeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC---------EEe------------------cCCceEEEecC
Q psy6361 6 NVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL---------LYV------------------TRNGSFVINNI 58 (148)
Q Consensus 6 ~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~---------~~~------------------~~~~~l~i~~~ 58 (148)
....+..|+.+.|.|.+.+.. + .+.||+.. ... .....|.|.++
T Consensus 9 ~~v~v~~G~~v~L~C~~s~~~-~--------~v~W~rq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~ 79 (207)
T 1ymm_D 9 QALSIQEGENATMNCSYKTSI-N--------NLQWYRQNSGRGLVHLILIRSNEREKHSGRLRVTLDTSKKSSSLLITAS 79 (207)
T ss_dssp CCCCCSSCCCCCBCCBCSSCE-E--------EEEEECCCSSCCCCCCCEEESSSCCCCSSSCCBCCBGGGTBCCBCCSSC
T ss_pred CEEEEeCCCCEEEEEEecCCC-c--------eEEEEEECCCCCcEEEEEEcCCCccccCCCEEEEEcCCCCEEEEEECcC
Confidence 446788999999999987655 3 69999853 000 01247999999
Q ss_pred CCCCCEEEEEEEEeCC--CC--cEEEEEEEEecC-----CEEEeCCCceEEEecCCcEEEEeeeec-ccCCeE
Q psy6361 59 AEKDTNVYTCTVSNAA--GS--TSKTIQMNVLVP-----PFFKDEQQESVAIVVNHPMNISCSHYG-VPTPDF 121 (148)
Q Consensus 59 ~~~d~g~y~C~~~~~~--~~--~~~~~~l~v~~~-----p~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~~~ 121 (148)
+.+|+|.|.|.+.+.. .. ......|.|... |.+... .. ....+.|.|.+.| .|.|.+
T Consensus 80 ~~~Dsg~Y~C~~~~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~-~~-----~~~~vtL~C~~~gf~P~p~v 146 (207)
T 1ymm_D 80 RAADTASYFCATDTTSGTYKYIFGTGTRLKVLANIQNPDPAVYQL-RD-----SKSSDKSVCLFTDFDSQTNV 146 (207)
T ss_dssp CSTTCSCCEEEEEETTSCSCEEECC------------------------------------------------
T ss_pred CcccCceEEEEEEcCCCcceeeECCCEEEEEECCCCCCCCEEEec-CC-----CCCCeEEEEEccccccCCcc
Confidence 9999999999988742 11 112235555422 222211 11 1236899999987 577755
No 485
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=98.68 E-value=2.3e-08 Score=57.48 Aligned_cols=60 Identities=17% Similarity=0.275 Sum_probs=45.5
Q ss_pred ceeeeEeeeccceeeeeeccc-CCCCcCCCCccEEEEeeCC-----E-----------------E-e-----cCCceEEE
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYT-NLPQSRNPGQVIKRYLKDL-----L-----------------Y-V-----TRNGSFVI 55 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~-~~p~~~~~~~~~v~W~~~~-----~-----------------~-~-----~~~~~l~i 55 (148)
.....+..|+.+.|.|.+.+. ..+ .+.||+.. . . . .....|.|
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~~~~--------~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 78 (116)
T 1fo0_A 7 QTSISVMEKTTVTMDCVYETQDSSY--------FLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLII 78 (116)
T ss_dssp CCEEEEETTCCEEECCEECCCCSSC--------EEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEEGGGTEEEEEE
T ss_pred CCcEEEecCCcEEEEeEecCCCCCe--------EEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEEeCCCCEEEEEE
Confidence 456789999999999999876 333 58998852 0 0 0 01236999
Q ss_pred ecCCCCCCEEEEEEEEe
Q psy6361 56 NNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 56 ~~~~~~d~g~y~C~~~~ 72 (148)
.+++.+|+|.|.|.+.+
T Consensus 79 ~~~~~~DsG~Y~C~~~~ 95 (116)
T 1fo0_A 79 TATQIEDSAVYFCAMRG 95 (116)
T ss_dssp CSCCGGGCEEEEEEEEC
T ss_pred CCCChhhCEEEEEEEEc
Confidence 99999999999999886
No 486
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=98.68 E-value=6.1e-08 Score=55.20 Aligned_cols=61 Identities=13% Similarity=0.185 Sum_probs=45.6
Q ss_pred ceeeeEeeeccceeeeeec-ccCCCCcCCCCccEEEEeeCC-----E-Ee----------------c---------CCce
Q psy6361 5 MNVEQAMLLDLIPMHSRYN-YTNLPQSRNPGQVIKRYLKDL-----L-YV----------------T---------RNGS 52 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~-~~~~p~~~~~~~~~v~W~~~~-----~-~~----------------~---------~~~~ 52 (148)
.....+..|+.+.|.|.+. +.+.+ .+.|++.. . .. . ....
T Consensus 6 p~~~~~~~G~~v~L~C~~~~~~~~~--------~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 77 (111)
T 2qhl_A 6 LHVKTVKRGENVTMECSMSKVKDKD--------KLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVNDQKFD 77 (111)
T ss_dssp CEEEECCTTCCEEECCBCTTCSCGG--------GEEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEESSSBEE
T ss_pred CceEEEeCCCCEEEEEEccCCcccc--------eEEEEEecCCCCCEEEEEEeccCCccccccCCCCCcEEEEEcCCeEE
Confidence 3467889999999999987 55444 58998842 0 00 0 1126
Q ss_pred EEEecCCCCCCEEEEEEEEeC
Q psy6361 53 FVINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 53 l~i~~~~~~d~g~y~C~~~~~ 73 (148)
|.|.+++.+|+|.|.|.+.+.
T Consensus 78 L~I~~~~~~DsG~Y~C~~~~~ 98 (111)
T 2qhl_A 78 LNIIGTREDDGGEYFCGEVEG 98 (111)
T ss_dssp EEESSCCGGGCEEEEEEEEET
T ss_pred EEECCCChhHCEEEEEEEccC
Confidence 999999999999999998874
No 487
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.67 E-value=4.6e-08 Score=63.46 Aligned_cols=59 Identities=12% Similarity=0.087 Sum_probs=45.3
Q ss_pred eeEeeeccceeeeeecccC--CCCcCCCCccEEEEeeCC-----EEe---------------------------cCCceE
Q psy6361 8 EQAMLLDLIPMHSRYNYTN--LPQSRNPGQVIKRYLKDL-----LYV---------------------------TRNGSF 53 (148)
Q Consensus 8 ~~~~~g~~~~l~C~~~~~~--~p~~~~~~~~~v~W~~~~-----~~~---------------------------~~~~~l 53 (148)
..+..|+.+.|.|.+.+.+ .+ .+.|+|+. ... .....|
T Consensus 144 ~~v~~G~~v~L~C~~~~~~~~~~--------~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 215 (256)
T 3ux9_B 144 GLVQPGGSLRLSCAASGFTFSSY--------AMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYL 215 (256)
T ss_dssp EEECTTCCEEEEEEEESSCGGGS--------EEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEE
T ss_pred eEEcCCCeEEEEEEEeCCccccc--------EEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEE
Confidence 3477899999999998866 34 79999862 100 112349
Q ss_pred EEecCCCCCCEEEEEEEEeCC
Q psy6361 54 VINNIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 54 ~i~~~~~~d~g~y~C~~~~~~ 74 (148)
.|.+++.+|+|.|+|.+.+..
T Consensus 216 ~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 216 QMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EECSCCGGGCEEEEEEEEETT
T ss_pred EECCCChhhCEEEEEEEEcCC
Confidence 999999999999999999863
No 488
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=98.66 E-value=2.9e-08 Score=56.67 Aligned_cols=59 Identities=17% Similarity=0.258 Sum_probs=45.3
Q ss_pred ceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC-----E-----------------Ee-----cCCceEEEec
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL-----L-----------------YV-----TRNGSFVINN 57 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~-----~-----------------~~-----~~~~~l~i~~ 57 (148)
.....+..|+.+.|.|.+.+.+.+ .+.||+.. . .. .....|.|.+
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~--------~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 78 (112)
T 2z35_A 7 GGQVALSEEDFLTIHCNYSASGYP--------ALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEATSFHLQKAS 78 (112)
T ss_dssp CSEEEEETTCCEEECCEEECSSCC--------EEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESS
T ss_pred CCcEEEcCCCCEEEEEEECCCCCC--------eEEEEEECCCCCcEEeEEEecccCCccCCCEEEEEcCCCCEEEEEECC
Confidence 345788999999999999876444 69998852 0 00 0134699999
Q ss_pred CCCCCCEEEEEEEE
Q psy6361 58 IAEKDTNVYTCTVS 71 (148)
Q Consensus 58 ~~~~d~g~y~C~~~ 71 (148)
++.+|+|.|.|.+.
T Consensus 79 ~~~~DsG~Y~C~~~ 92 (112)
T 2z35_A 79 VQESDSAVYYCALS 92 (112)
T ss_dssp CCSTTCSEEEEEEE
T ss_pred CChhhCEEEEEEEE
Confidence 99999999999987
No 489
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.66 E-value=4.4e-08 Score=55.48 Aligned_cols=49 Identities=29% Similarity=0.554 Sum_probs=42.5
Q ss_pred cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCce
Q psy6361 87 VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHY 136 (148)
Q Consensus 87 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~ 136 (148)
.+|.+... +....+.+|+.+.|.|.+.+.|.+.+.|+++|..+......
T Consensus 8 ~~P~i~~~-~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~ 56 (110)
T 2dm3_A 8 FRPHFLQA-PGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAH 56 (110)
T ss_dssp CCCEEEEC-CCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSE
T ss_pred CCCcEEeC-CCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCce
Confidence 46788877 78889999999999999999999999999999988765543
No 490
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=98.65 E-value=2.3e-07 Score=54.33 Aligned_cols=67 Identities=9% Similarity=0.096 Sum_probs=44.7
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCCE-------------------------Eec-----CCceEEEe
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLL-------------------------YVT-----RNGSFVIN 56 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~~-------------------------~~~-----~~~~l~i~ 56 (148)
...+..|+.+.|.|.+....... .......+.||+... ... ...+|.|.
T Consensus 15 ~v~~~~G~~v~L~C~~~~~~~~~-~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 93 (132)
T 1nko_A 15 SVTVQEGMCVHVRCSFSYPVDSD-TDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKNCTLSIR 93 (132)
T ss_dssp EEEEETTCCEEECEEEECCCCTT-TTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSCGGGTBCCEEEC
T ss_pred EEEEcCCCeEEEEccccCCCccc-cCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCCCCCCceEEEEc
Confidence 46789999999999987421000 000112699999640 000 12379999
Q ss_pred cCCCCCCEEEEEEEEeCC
Q psy6361 57 NIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 57 ~~~~~d~g~y~C~~~~~~ 74 (148)
+++.+|+|.|.|.+.+..
T Consensus 94 ~v~~~DsG~Y~C~v~~~~ 111 (132)
T 1nko_A 94 DARMSDAGRYFFRMEKGN 111 (132)
T ss_dssp SCCGGGCEEEEEEEEETT
T ss_pred ccCcccCeeEEEEEEcCC
Confidence 999999999999988753
No 491
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.65 E-value=8.1e-08 Score=54.41 Aligned_cols=45 Identities=29% Similarity=0.653 Sum_probs=39.6
Q ss_pred cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeec
Q psy6361 87 VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRI 132 (148)
Q Consensus 87 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~ 132 (148)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+++|..+..
T Consensus 7 ~~P~~~~~-~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~ 51 (110)
T 2dm2_A 7 GAPFFEMK-LKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISP 51 (110)
T ss_dssp CCCCBSSC-CCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCT
T ss_pred CCCEEEec-CcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCC
Confidence 46777766 7778899999999999999999999999999998875
No 492
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.65 E-value=3.5e-08 Score=56.64 Aligned_cols=61 Identities=11% Similarity=0.132 Sum_probs=45.4
Q ss_pred ceeeeEeeeccceeeeeeccc-CCCCcCCCCccEEEEeeCC-----E--------------------E-----ecCCceE
Q psy6361 5 MNVEQAMLLDLIPMHSRYNYT-NLPQSRNPGQVIKRYLKDL-----L--------------------Y-----VTRNGSF 53 (148)
Q Consensus 5 ~~~~~~~~g~~~~l~C~~~~~-~~p~~~~~~~~~v~W~~~~-----~--------------------~-----~~~~~~l 53 (148)
.....+..|+++.|.|.+... +.+ .+.|++.. . . ......|
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~~~~--------~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 78 (116)
T 1tvd_A 7 SPDQTVASGSEVVLLCTYDTVYSNP--------DLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQKAFHL 78 (116)
T ss_dssp SCCEEEETTCCEEECCEEECCSSSC--------CEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGTEEEE
T ss_pred CCcEEEecCCeEEEEeEeEcCCCCc--------EEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEecCCCEEEE
Confidence 345788999999999998754 233 58998852 0 0 0112369
Q ss_pred EEecCCCCCCEEEEEEEEeC
Q psy6361 54 VINNIAEKDTNVYTCTVSNA 73 (148)
Q Consensus 54 ~i~~~~~~d~g~y~C~~~~~ 73 (148)
.|.+++.+|+|.|.|.+.+.
T Consensus 79 ~I~~~~~~DsG~Y~C~~~~~ 98 (116)
T 1tvd_A 79 VISPVRTEDSATYYCAFTLP 98 (116)
T ss_dssp EESSCCGGGCEEEEEEEECT
T ss_pred EEccCChHHCEEEEEEEeCC
Confidence 99999999999999998874
No 493
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=98.65 E-value=1.7e-07 Score=51.31 Aligned_cols=46 Identities=20% Similarity=0.426 Sum_probs=39.0
Q ss_pred CCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCC
Q psy6361 88 PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQS 134 (148)
Q Consensus 88 ~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~ 134 (148)
++.+... +....+.+|+.+.|.|.+.|.|.|.+.|+++|..+....
T Consensus 3 ~~~i~~~-p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~ 48 (91)
T 3bfo_A 3 KLQICVE-PTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET 48 (91)
T ss_dssp CCEEEEC-CCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCC
T ss_pred ceEEEEC-CCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCC
Confidence 3556666 777889999999999999999999999999999886543
No 494
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=98.64 E-value=2.9e-07 Score=50.85 Aligned_cols=51 Identities=12% Similarity=0.192 Sum_probs=41.3
Q ss_pred CceEEEecCCcEEEEeeeecc-cCCeEEEEECCEEeecCCceEEE------EEEEEee
Q psy6361 96 QESVAIVVNHPMNISCSHYGV-PTPDFSWYKDGSLLRIQSHYITF------FLFFQRL 146 (148)
Q Consensus 96 ~~~~~~~~g~~~~l~C~~~g~-p~~~~~W~~~g~~l~~~~~~~~~------~l~~~~~ 146 (148)
+....+.+|+.+.|.|.+.|. |.|.+.|++++..+....++... .|.|..+
T Consensus 8 ~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 65 (97)
T 2bk8_A 8 IMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDI 65 (97)
T ss_dssp CCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSC
T ss_pred CcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecC
Confidence 667889999999999999997 99999999999998876665431 5665543
No 495
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.64 E-value=1.4e-07 Score=52.23 Aligned_cols=43 Identities=23% Similarity=0.591 Sum_probs=37.8
Q ss_pred CCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEee
Q psy6361 88 PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLR 131 (148)
Q Consensus 88 ~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~ 131 (148)
+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++++..+.
T Consensus 5 pP~i~~~-~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~ 47 (100)
T 3irg_A 5 PPKIEAL-PSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIH 47 (100)
T ss_dssp EEEECCC-CSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECC
T ss_pred CCeeecC-CCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEee
Confidence 4566666 777889999999999999999999999999999886
No 496
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; 3.52A {Mus musculus}
Probab=98.64 E-value=1.2e-07 Score=60.90 Aligned_cols=112 Identities=11% Similarity=0.242 Sum_probs=72.2
Q ss_pred eeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC---------------------------EE-e----cCCceEE
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL---------------------------LY-V----TRNGSFV 54 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~---------------------------~~-~----~~~~~l~ 54 (148)
.+.+..|+++.|.|.+.+..... ..+.|++.. .. . .....|.
T Consensus 9 ~~lvkPG~Sl~lSC~~SG~tf~~------y~~~WvRQaPGkgLEWvg~I~~~~g~t~Y~~s~kgR~TiSrD~s~nt~yLq 82 (254)
T 4f9p_D 9 AEVVRPGTSVKVSCKASGYAFTS------YLIHWIKQRPGQGLEWIGVINPRSGDSHYNEKFKDRTTLTADQSSSTAYMQ 82 (254)
T ss_dssp CEEECTTCCEEEEEEEESSCGGG------CCEEEEEEETTTEEEEEEEEETTTTEEECCTTTTTTEEEEEETTTTEEEEE
T ss_pred CceECCCCCeEEEEEEeCCChhh------CcEEEEEeCCCCCeEEEEEEcCCCCCEEECHHhCCCEEEeeccCCCcCeeE
Confidence 35678899999999998876432 147787752 00 0 1123588
Q ss_pred EecCCCCCCEEEEEEEEeCCCCcEEEEEEEEec----CC-----------------EEEeCCCceEEEecCCcEEEEeee
Q psy6361 55 INNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLV----PP-----------------FFKDEQQESVAIVVNHPMNISCSH 113 (148)
Q Consensus 55 i~~~~~~d~g~y~C~~~~~~~~~~~~~~l~v~~----~p-----------------~~~~~~~~~~~~~~g~~~~l~C~~ 113 (148)
+.+++.+|.+.|+|........--....++|.. .| .+++. |....+.+|+.+.|+|.+
T Consensus 83 m~sL~~eDTAvYYCAr~~~~d~WGqGT~VTVSSast~~ps~~~l~~~~sgGSgsdivltQs-P~slsvs~G~~vtlsC~~ 161 (254)
T 4f9p_D 83 LSSLTSDDSAVYFCARSDYGAYWGQGTLVTVSAAGGGGSGGGGSGGGGSGGGGSDIVLTQS-PVTLSVTPGDSVSLSCRA 161 (254)
T ss_dssp ECSCCGGGCEEEECEESSSCCEECCCEEEEECC-------------------CCSCCEEEE-CSEEEECTTCEEEEEEEE
T ss_pred EccCCCCCCEEEEEEecCCCCCcCCCEEEEEeCCCCcCCCCCCCccccccccccccccccC-CceeEEcCCCcEeeEEEc
Confidence 999999999999996432111111223445531 11 23444 667789999999999998
Q ss_pred ecccCCeEEEEE
Q psy6361 114 YGVPTPDFSWYK 125 (148)
Q Consensus 114 ~g~p~~~~~W~~ 125 (148)
+..-...+.||+
T Consensus 162 S~~~~~~l~Wyq 173 (254)
T 4f9p_D 162 SQSISNNLHWYR 173 (254)
T ss_dssp SSCCTTCCEEEE
T ss_pred cCcccCCcEEEE
Confidence 765555688995
No 497
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=98.64 E-value=6.1e-08 Score=60.98 Aligned_cols=58 Identities=14% Similarity=0.095 Sum_probs=44.4
Q ss_pred eeccceeeeeeccc-CCCCcCCCCccEEEEeeCCEEecCC------------------ceEEEecCCCCCCEEEEEEEEe
Q psy6361 12 LLDLIPMHSRYNYT-NLPQSRNPGQVIKRYLKDLLYVTRN------------------GSFVINNIAEKDTNVYTCTVSN 72 (148)
Q Consensus 12 ~g~~~~l~C~~~~~-~~p~~~~~~~~~v~W~~~~~~~~~~------------------~~l~i~~~~~~d~g~y~C~~~~ 72 (148)
.|+.+.|.|.+.+. |.|. .+.|+|++...... ..|.|.++..+|+|.|+|.+.|
T Consensus 125 ~g~~v~l~C~~~g~~p~~~-------~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n 197 (210)
T 1lk3_L 125 ATGGASVVCLMNNFYPRDI-------SVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVH 197 (210)
T ss_dssp TTTEEEEEEEEEEEBSSCC-------EEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEC
T ss_pred cCCcEEEEEEEEeEeCCce-------EEEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEe
Confidence 47889999999874 3433 69999998322111 1688999999999999999999
Q ss_pred CCCC
Q psy6361 73 AAGS 76 (148)
Q Consensus 73 ~~~~ 76 (148)
....
T Consensus 198 ~~~~ 201 (210)
T 1lk3_L 198 KTSS 201 (210)
T ss_dssp TTCS
T ss_pred cCCC
Confidence 7654
No 498
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.64 E-value=6.6e-08 Score=54.49 Aligned_cols=58 Identities=12% Similarity=0.159 Sum_probs=46.0
Q ss_pred cCCEEEeCCCceEEEecCCcEEEEeeeecccCCeEEEEECCEEeecCCceEEE------EEEEEee
Q psy6361 87 VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYITF------FLFFQRL 146 (148)
Q Consensus 87 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~~~g~~l~~~~~~~~~------~l~~~~~ 146 (148)
.+|.+... +....+.+|+.+.|.|.+.+.|.+ +.|||+|..+....++... .|.|..+
T Consensus 7 ~~p~~~~~-~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v 70 (106)
T 2dlt_A 7 GQLEVLQD-IADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDV 70 (106)
T ss_dssp CCCCEEEC-CCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSC
T ss_pred CCCEEecC-CCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCC
Confidence 35677777 788899999999999999988877 9999999998776665432 5666554
No 499
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=98.64 E-value=1.2e-07 Score=55.06 Aligned_cols=61 Identities=10% Similarity=0.135 Sum_probs=46.0
Q ss_pred eeeEeeeccceeeeeecccCC-CCcCCCCccEEEEeeCC-----E--------------------EecCCceEEEecCCC
Q psy6361 7 VEQAMLLDLIPMHSRYNYTNL-PQSRNPGQVIKRYLKDL-----L--------------------YVTRNGSFVINNIAE 60 (148)
Q Consensus 7 ~~~~~~g~~~~l~C~~~~~~~-p~~~~~~~~~v~W~~~~-----~--------------------~~~~~~~l~i~~~~~ 60 (148)
...+..|+.+.|.|.+.+.+. .. .+.||+.. . .......|.|.+++.
T Consensus 9 ~v~v~~G~~vtL~C~~s~~~~~~~-------~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~l~~ 81 (123)
T 3t0v_A 9 SVSGTPGQKVTIFCSGSSSNVEDN-------SVYWYQQFPGTTPKVLIYNDDRRSSGVPDRFSGSKSGTSASLAISGLRS 81 (123)
T ss_dssp CEEECTTCCEEEEEECCTTTTTTS-------CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCG
T ss_pred eEEEcCCCCEEEEEecCCCccCCC-------eEEEEEECCCCCCEEEEEECCcCCCCCcCCEEEEccCCEEEEEECCCCH
Confidence 567889999999999987642 11 58999852 0 011235799999999
Q ss_pred CCCEEEEEEEEeCC
Q psy6361 61 KDTNVYTCTVSNAA 74 (148)
Q Consensus 61 ~d~g~y~C~~~~~~ 74 (148)
+|+|.|.|.+.+..
T Consensus 82 ~DsG~Y~C~~~~~~ 95 (123)
T 3t0v_A 82 EDEADYYCLSWDDS 95 (123)
T ss_dssp GGCEEEEEEEEETT
T ss_pred HHCEEEEEEEEcCC
Confidence 99999999987754
No 500
>1hkf_A NKP44, NK cell activating receptor; natural cytotoxicity receptor, immunoglobulin domain; 2.2A {Homo sapiens} SCOP: b.1.1.1
Probab=98.63 E-value=1.8e-07 Score=54.23 Aligned_cols=65 Identities=15% Similarity=0.207 Sum_probs=46.4
Q ss_pred cceeeeEeeeccceeeeeecccCCCCcCCCCccEEEEeeCC---------------------E-Ee-----cCCceEEEe
Q psy6361 4 TMNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDL---------------------L-YV-----TRNGSFVIN 56 (148)
Q Consensus 4 ~~~~~~~~~g~~~~l~C~~~~~~~p~~~~~~~~~v~W~~~~---------------------~-~~-----~~~~~l~i~ 56 (148)
......+..|++++|.|.+...... ...+.||+.. + .. .....|.|.
T Consensus 16 ~~~~v~~~~G~svtL~C~~s~~~~~------~~~v~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 89 (122)
T 1hkf_A 16 KAQVLQSVAGQTLTVRCQYPPTGSL------YEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMT 89 (122)
T ss_dssp CCEEEEECTTCCEEEEEECCCCTTC------CCEEEEEEEEETTEEEEEEEECSTTCCBCSTTEEEEEETTTTEEEEEEC
T ss_pred CCceEEEecCCCEEEEeEccCCCCc------ccEEEEEcCCCCCCceEEEEeCCeEeEeecCcEEEEEcCcCCEEEEEEe
Confidence 3456788999999999998754211 0158898862 0 00 112469999
Q ss_pred cCCCCCCEEEEEEEEeCC
Q psy6361 57 NIAEKDTNVYTCTVSNAA 74 (148)
Q Consensus 57 ~~~~~d~g~y~C~~~~~~ 74 (148)
+++.+|+|.|.|.+....
T Consensus 90 ~l~~~Dsg~Y~C~v~~~~ 107 (122)
T 1hkf_A 90 DLREEDSGHYWCRIYRPS 107 (122)
T ss_dssp SCCGGGCEEEEEEEECTT
T ss_pred CCCHHHCEEEEEEEEcCC
Confidence 999999999999988754
Done!