RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6361
(148 letters)
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 46.1 bits (108), Expect = 5e-08
Identities = 11/50 (22%), Positives = 19/50 (38%)
Query: 46 YVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLVPPFFKDEQ 95
R+G +N + YT +N G S +I + PF + +
Sbjct: 58 ETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNPFEFNPE 107
Score = 25.3 bits (54), Expect = 1.7
Identities = 15/43 (34%), Positives = 17/43 (39%)
Query: 102 VVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYITFFLFFQ 144
V H I S G P P W +GS+L S T FL
Sbjct: 13 VEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPA 55
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 43.3 bits (101), Expect = 6e-07
Identities = 9/38 (23%), Positives = 14/38 (36%)
Query: 52 SFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLVPP 89
I ++ YT V N GS + + V+ P
Sbjct: 57 KLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKP 94
Score = 28.7 bits (63), Expect = 0.12
Identities = 7/60 (11%), Positives = 14/60 (23%), Gaps = 2/60 (3%)
Query: 88 PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYITFFLFFQRLL 147
P + E + + + G +W K ++ H L
Sbjct: 1 PQIIQ--FPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKL 58
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 42.7 bits (99), Expect = 1e-06
Identities = 14/89 (15%), Positives = 27/89 (30%)
Query: 3 GTMNVEQAMLLDLIPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTRNGSFVINNIAEKD 62
M V +H N + + P + L + I N+ D
Sbjct: 33 TGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQNVRFSD 92
Query: 63 TNVYTCTVSNAAGSTSKTIQMNVLVPPFF 91
YTC + + +++ V P ++
Sbjct: 93 EGGYTCFFRDHSYQEEAAVELKVEDPFYW 121
>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 42.3 bits (98), Expect = 2e-06
Identities = 7/72 (9%), Positives = 16/72 (22%)
Query: 18 MHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTRNGSFVINNIAEKDTNVYTCTVSNAAGST 77
+ S+ + + + I + Y C V+
Sbjct: 35 IKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFD 94
Query: 78 SKTIQMNVLVPP 89
S + + V
Sbjct: 95 SCSFDLEVHEST 106
>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 98
Score = 42.0 bits (98), Expect = 2e-06
Identities = 10/69 (14%), Positives = 24/69 (34%)
Query: 19 HSRYNYTNLPQSRNPGQVIKRYLKDLLYVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTS 78
R+ + + ++ + NG I N+ D+ Y TV + G+
Sbjct: 28 EVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTNGTRI 87
Query: 79 KTIQMNVLV 87
+++ +
Sbjct: 88 LNKALDLRI 96
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 41.7 bits (97), Expect = 2e-06
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 46 YVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVL 86
++ S ++ ++ D YTC V N GS + T ++V+
Sbjct: 57 VRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVV 97
Score = 33.6 bits (76), Expect = 0.002
Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Query: 88 PPFFKDEQQE--SVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHY 136
P + E+ E A+ + + C G P P W K+G + +
Sbjct: 2 PYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRI 52
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 40.8 bits (94), Expect = 5e-06
Identities = 9/68 (13%), Positives = 14/68 (20%)
Query: 18 MHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTRNGSFVINNIAEKDTNVYTCTVSNAAGST 77
+ S+ + D I + T Y C VS
Sbjct: 39 VKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGGYRCEVSTKDKFD 98
Query: 78 SKTIQMNV 85
+ V
Sbjct: 99 CSNFNLTV 106
Score = 25.0 bits (53), Expect = 2.6
Identities = 7/42 (16%), Positives = 12/42 (28%), Gaps = 4/42 (9%)
Query: 88 PPFFKDEQQESVAIVVNHPMNISCSHYGVP---TPDFSWYKD 126
F + + + V + S G P W+K
Sbjct: 4 IGLFV-MRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKG 44
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 40.7 bits (94), Expect = 5e-06
Identities = 13/68 (19%), Positives = 22/68 (32%)
Query: 19 HSRYNYTNLPQSRNPGQVIKRYLKDLLYVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTS 78
H N + P + + I N+ +D YTC N+ G +
Sbjct: 42 HVEKNGSKYGPDGLPYLKVLKAAGVNTTDKEIEVLYIRNVTFEDAGEYTCLAGNSIGISF 101
Query: 79 KTIQMNVL 86
+ + VL
Sbjct: 102 HSAWLTVL 109
Score = 30.7 bits (68), Expect = 0.028
Identities = 8/43 (18%), Positives = 12/43 (27%)
Query: 88 PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLL 130
P + + + VV + C Y P W K
Sbjct: 4 RPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKN 46
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 41.2 bits (95), Expect = 6e-06
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 50 NGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVL 86
F + ++D VYT TV N G + + V+
Sbjct: 93 RSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 129
Score = 26.6 bits (57), Expect = 0.88
Identities = 8/56 (14%), Positives = 16/56 (28%), Gaps = 4/56 (7%)
Query: 88 PPFFK----DEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYITF 139
PP +++ +V + + + G P P W K +
Sbjct: 4 PPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAP 59
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 40.1 bits (93), Expect = 7e-06
Identities = 8/40 (20%), Positives = 12/40 (30%)
Query: 46 YVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNV 85
+ VI + D Y C +N G + V
Sbjct: 49 ATVTDSGLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 88
Score = 30.5 bits (68), Expect = 0.019
Identities = 7/39 (17%), Positives = 18/39 (46%)
Query: 88 PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKD 126
P ++ + ++ + + + I C G+P P+ W +
Sbjct: 2 APKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHN 40
>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 39.6 bits (91), Expect = 1e-05
Identities = 11/71 (15%), Positives = 22/71 (30%)
Query: 17 PMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTRNGSFVINNIAEKDTNVYTCTVSNAAGS 76
P + + NP + G V + ++ DT Y+C N G+
Sbjct: 32 PSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGT 91
Query: 77 TSKTIQMNVLV 87
+ + +
Sbjct: 92 PMTSNAVRMEA 102
>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 39.5 bits (91), Expect = 1e-05
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 46 YVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLVPPFFKDE 94
G + N + YT N G+ ++TI + L PF DE
Sbjct: 57 GEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKEPFPVDE 105
Score = 27.2 bits (59), Expect = 0.36
Identities = 8/42 (19%), Positives = 12/42 (28%), Gaps = 4/42 (9%)
Query: 85 VLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKD 126
V PP ++ + I G P P W +
Sbjct: 2 VYYPPRVVSLEEPELR----LEHCIEFVVRGNPPPTLHWLHN 39
>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1,
ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 38.8 bits (89), Expect = 2e-05
Identities = 7/37 (18%), Positives = 13/37 (35%)
Query: 52 SFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLVP 88
+ Y C + G ++ + +NVL P
Sbjct: 48 IGESVTVTRDLEGTYLCRARSTQGEVTREVTVNVLSP 84
Score = 26.1 bits (56), Expect = 0.72
Identities = 7/38 (18%), Positives = 12/38 (31%)
Query: 88 PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYK 125
P + + + N C +G P P+ K
Sbjct: 3 PRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLK 40
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 38.8 bits (89), Expect = 2e-05
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 46 YVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNV 85
+ NG I N+ D Y CT SN T ++V
Sbjct: 49 AMDFNGILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLHV 88
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 38.7 bits (89), Expect = 3e-05
Identities = 10/38 (26%), Positives = 15/38 (39%)
Query: 50 NGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLV 87
+ I N+ + D Y C N AG +I + V
Sbjct: 62 SSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFA 99
Score = 31.4 bits (70), Expect = 0.013
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 87 VPPFFKDEQQ-ESVAIVVNHPMNISCSHYGVPTPDFSWYKDG 127
VPP + Q + + + + C G P P SW KDG
Sbjct: 2 VPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDG 43
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 38.3 bits (88), Expect = 3e-05
Identities = 9/40 (22%), Positives = 16/40 (40%)
Query: 50 NGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLVPP 89
+ IN + D YT N+ G+ + + +NV
Sbjct: 56 DYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNVTRHS 95
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 91
Score = 37.5 bits (86), Expect = 6e-05
Identities = 7/34 (20%), Positives = 15/34 (44%)
Query: 52 SFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNV 85
+F I+++ D Y+ V N+ G + +
Sbjct: 56 TFEISSVQASDEGNYSVVVENSEGKQEAEFTLTI 89
Score = 23.7 bits (50), Expect = 6.0
Identities = 7/31 (22%), Positives = 11/31 (35%)
Query: 94 EQQESVAIVVNHPMNISCSHYGVPTPDFSWY 124
+ S+ + SC G P P +W
Sbjct: 4 TKPRSMTVYEGESARFSCDTDGEPVPTVTWL 34
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 37.5 bits (86), Expect = 6e-05
Identities = 7/40 (17%), Positives = 16/40 (40%)
Query: 46 YVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNV 85
+++ I N+ +D Y C N G + ++ +
Sbjct: 50 WLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIII 89
Score = 29.4 bits (65), Expect = 0.061
Identities = 10/60 (16%), Positives = 17/60 (28%)
Query: 87 VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYITFFLFFQRL 146
P K + + + + C +G P P W K + L Q +
Sbjct: 3 YAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSKWLSSEPLLHIQNV 62
>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 37.6 bits (86), Expect = 8e-05
Identities = 9/41 (21%), Positives = 15/41 (36%)
Query: 49 RNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLVPP 89
+G ++N + YT N G K I + + P
Sbjct: 60 YHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWP 100
Score = 28.8 bits (63), Expect = 0.11
Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Query: 85 VLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYITFF 140
V P + +H I + G P P W+ +G++L + T
Sbjct: 1 VHFAPTI----TFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKI 52
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM,
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 102
Score = 37.4 bits (85), Expect = 9e-05
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 46 YVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLV 87
+ +++ KD YTC VS G + +++ V
Sbjct: 60 VTFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTV 101
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 36.1 bits (82), Expect = 2e-04
Identities = 7/38 (18%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 49 RNGSFVINNIAEKDTNVYTCTVSNAAGS-TSKTIQMNV 85
G + ++ D Y C V + + S+ + + V
Sbjct: 52 WIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTV 89
Score = 24.5 bits (52), Expect = 3.4
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 95 QQESVAIVVNHPMNISCSHYGVPTPDFSWYK 125
+ + P+ ++CS G+ PD W K
Sbjct: 2 APVKLTVSQGQPVKLNCSVEGMEEPDIQWVK 32
>d1eaja_ b.1.1.1 (A:) Coxsackie virus and adenovirus receptor (Car),
domain 1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 124
Score = 36.9 bits (84), Expect = 2e-04
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 50 NGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLV 87
+ S + N+ D Y C V A G +K I + VLV
Sbjct: 87 DASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 124
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 36.5 bits (83), Expect = 2e-04
Identities = 9/71 (12%), Positives = 23/71 (32%), Gaps = 2/71 (2%)
Query: 17 PMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTRNGSFVINNIAEKDTNVYTCTVSNAAGS 76
+S + + + + ++G + + + D+ Y C N G+
Sbjct: 33 SEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGT 92
Query: 77 --TSKTIQMNV 85
S+ M+
Sbjct: 93 AMRSEAAHMDA 103
Score = 26.9 bits (58), Expect = 0.66
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 87 VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHY 136
VPP S + N + H G P ++SW+KDG +
Sbjct: 1 VPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAK 50
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 36.1 bits (82), Expect = 3e-04
Identities = 8/35 (22%), Positives = 11/35 (31%)
Query: 53 FVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLV 87
I I + D Y C A + V+V
Sbjct: 58 LQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIV 92
Score = 24.1 bits (51), Expect = 4.7
Identities = 7/39 (17%), Positives = 8/39 (20%), Gaps = 1/39 (2%)
Query: 89 PFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDG 127
FK+ I C P W G
Sbjct: 2 LMFKNAPT-PQEFKEGEDAVIVCDVVSSLPPTIIWKHKG 39
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo)
[TaxId: 9103]}
Length = 102
Score = 35.6 bits (81), Expect = 4e-04
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 50 NGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNV 85
N S I+ + D YTC N+ G + T ++ V
Sbjct: 64 NCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLV 99
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 34.6 bits (78), Expect = 8e-04
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 52 SFVINNIAEKDTNVYTCTVSNAAGS-TSKTIQMNV 85
SF + N ++D Y C + G S ++ V
Sbjct: 61 SFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVV 95
>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 34.3 bits (77), Expect = 0.001
Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 52 SFVINNI-AEKDTNVYTCTVSNAAGSTSKTIQMNVLVPP 89
+ I+NI +Y CT N+ GS ++ I++
Sbjct: 70 TLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGSE 108
Score = 25.8 bits (55), Expect = 1.4
Identities = 9/41 (21%), Positives = 12/41 (29%), Gaps = 2/41 (4%)
Query: 84 NVLVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWY 124
V PP Q + + I C P PD +
Sbjct: 3 TVNGPPIISSTQTQHA--LHGEKGQIKCFIRSTPPPDRIAW 41
>d1cs6a2 b.1.1.4 (A:104-208) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 105
Score = 33.9 bits (76), Expect = 0.002
Identities = 7/49 (14%), Positives = 17/49 (34%), Gaps = 5/49 (10%)
Query: 46 YVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTI-----QMNVLVPP 89
G+ I D Y+C ++ +K++ Q+++
Sbjct: 56 VSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAED 104
>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha
subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 89
Score = 33.4 bits (75), Expect = 0.002
Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 53 FVINNIAEKDTNVYTCTVSNAAGS-TSKTIQMNVLVPP 89
I N +D+ Y CT S+ + + V+ P
Sbjct: 51 ISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAP 88
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 98
Score = 33.7 bits (76), Expect = 0.002
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 53 FVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNV 85
VI ++ +D+ N AG TS + V
Sbjct: 63 LVIRDVTGEDSASIMVKAINIAGETSSHAFLLV 95
Score = 27.1 bits (59), Expect = 0.42
Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Query: 88 PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYITFF 140
P E+ +S + + G P P+ WYK+G + ++
Sbjct: 4 APKIF-ERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYW 55
>d1dr9a1 b.1.1.1 (A:1-105) CD80, N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 105
Score = 33.7 bits (76), Expect = 0.002
Identities = 12/71 (16%), Positives = 20/71 (28%)
Query: 16 IPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTRNGSFVINNIAEKDTNVYTCTVSNAAG 75
I S + + + + +T N S VI + D Y C V
Sbjct: 30 IYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECVVLKYEK 89
Query: 76 STSKTIQMNVL 86
K + +
Sbjct: 90 DAFKREHLAEV 100
>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 33.1 bits (74), Expect = 0.003
Identities = 8/70 (11%), Positives = 20/70 (28%)
Query: 18 MHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTRNGSFVINNIAEKDTNVYTCTVSNAAGST 77
+ + + + + +I N++E D+ VY C +
Sbjct: 17 LKCSQKSNLARVFWKFQNGVLKAESPKYGLMGRKNLLIFNLSEGDSGVYQCLSEERVKNK 76
Query: 78 SKTIQMNVLV 87
+ + V
Sbjct: 77 TVFQVVAKHV 86
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 32.9 bits (74), Expect = 0.003
Identities = 6/33 (18%), Positives = 15/33 (45%)
Query: 53 FVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNV 85
+ + +D+ +Y C N G+ + ++ V
Sbjct: 55 LRFSKLVLEDSGMYQCVAENKHGTVYASAELTV 87
>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 33.2 bits (74), Expect = 0.003
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 50 NGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLV 87
++ +DT YTC VS G++ +++ ++V
Sbjct: 67 PTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIV 104
>d1neua_ b.1.1.1 (A:) Myelin membrane adhesion molecule P0 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 119
Score = 33.0 bits (74), Expect = 0.004
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 48 TRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLV 87
++GS VI+N+ D +TC V N KT Q+ + V
Sbjct: 78 WKDGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYV 117
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 32.9 bits (74), Expect = 0.004
Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Query: 46 YVTRNGSFVINNIAEKDTNVYTCTVSNAAG----STSKTIQMNVLVPP 89
+ ++ N+AEK YTC S ++ I+ L
Sbjct: 53 FSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEEN 100
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 32.7 bits (73), Expect = 0.005
Identities = 9/35 (25%), Positives = 11/35 (31%), Gaps = 1/35 (2%)
Query: 52 SFVINNIAEKDTNVYTCTVSNAAGS-TSKTIQMNV 85
S V D Y C AG +S+ I
Sbjct: 59 SLVFLRPQASDEGHYQCFAETPAGVASSRVISFRK 93
>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 88
Score = 32.2 bits (72), Expect = 0.006
Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Query: 39 RYLKDLLYVTRNGSFVINNIAEKDTNVYTCTVSNAAGS-TSKTIQMNVLVP 88
+ K + + +F I + Y CT + +SK + + V P
Sbjct: 37 QNGKSKKFSRSDPNFSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAP 87
>d1l6za1 b.1.1.1 (A:1-107) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), N-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 107
Score = 32.0 bits (72), Expect = 0.008
Identities = 14/71 (19%), Positives = 23/71 (32%), Gaps = 5/71 (7%)
Query: 16 IPMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTRNGSFVINNIAEKDTNVYTCTVSNA-A 74
+ GQ + NGS + I KD VYT +++
Sbjct: 40 AIDKEIARFVPNSNMNFTGQ----AYSGREIIYSNGSLLFQMITMKDMGVYTLDMTDENY 95
Query: 75 GSTSKTIQMNV 85
T T++ +V
Sbjct: 96 RRTQATVRFHV 106
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 31.8 bits (71), Expect = 0.008
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 50 NGSFVINNIAEKDTNVYTCTVSNAAGS-TSKTIQMNVL 86
+ +D VYTC V N G ++++ V+
Sbjct: 60 GKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVV 97
Score = 27.9 bits (61), Expect = 0.19
Identities = 6/40 (15%), Positives = 13/40 (32%), Gaps = 4/40 (10%)
Query: 86 LVPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYK 125
VP + + + I C + P +++K
Sbjct: 4 PVPQYVS----KDMMAKAGDVTMIYCMYGSNPMGYPNYFK 39
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 31.7 bits (71), Expect = 0.008
Identities = 4/32 (12%), Positives = 11/32 (34%)
Query: 52 SFVINNIAEKDTNVYTCTVSNAAGSTSKTIQM 83
+I + D Y+ + S ++ +
Sbjct: 58 ILIIEGATKADAAEYSVMTTGGQSSAKLSVDL 89
>d1iray1 b.1.1.4 (Y:1-101) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 31.8 bits (71), Expect = 0.009
Identities = 6/41 (14%), Positives = 11/41 (26%)
Query: 46 YVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVL 86
+D+ Y C V N++ I +
Sbjct: 54 IHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 94
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 31.6 bits (70), Expect = 0.010
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 54 VINNIAEKDTNVYTCTVSNAAGSTSKTIQMNV 85
+ N E D Y C +++ GS I + V
Sbjct: 69 IENLNMEADPGQYRCNGTSSKGSDQAIITLRV 100
>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 31.4 bits (70), Expect = 0.011
Identities = 8/34 (23%), Positives = 13/34 (38%)
Query: 48 TRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTI 81
T +GS I N+ D + Y N + +
Sbjct: 57 TVSGSLTIYNLTSSDEDEYEMESPNITDTMKFFL 90
>d1l6za2 b.1.1.4 (A:108-203) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 96
Score = 31.2 bits (69), Expect = 0.014
Identities = 12/73 (16%), Positives = 25/73 (34%), Gaps = 1/73 (1%)
Query: 18 MHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTRNGSFVINNIAEKDTNVYTCTVSNAAGS- 76
+ N + + + N I+ I +D Y C +SN
Sbjct: 23 LTCLSNDIGANIQWLFNSQSLQLTERMTLSQNNSILRIDPIKREDAGEYQCEISNPVSVR 82
Query: 77 TSKTIQMNVLVPP 89
S +I+++++ P
Sbjct: 83 RSNSIKLDIIFDP 95
>d1wgoa_ b.1.3.1 (A:) VPS10 domain-containing receptor SorCS2 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 123
Score = 31.2 bits (70), Expect = 0.018
Identities = 7/44 (15%), Positives = 13/44 (29%)
Query: 46 YVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLVPP 89
+T G + + + N AG + + V P
Sbjct: 78 NLTLTGEPIRHRYESPGIYRVSVRAENTAGHDEAVLFVQVSGPS 121
>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 93
Score = 30.7 bits (68), Expect = 0.018
Identities = 6/30 (20%), Positives = 10/30 (33%)
Query: 56 NNIAEKDTNVYTCTVSNAAGSTSKTIQMNV 85
+ D+ Y V N G ++ V
Sbjct: 63 PSAKRADSGNYKLKVKNELGEDEAIFEVIV 92
Score = 24.2 bits (51), Expect = 4.8
Identities = 7/38 (18%), Positives = 11/38 (28%), Gaps = 1/38 (2%)
Query: 87 VPPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWY 124
+ P + I N+ G P P +W
Sbjct: 1 LKPKIL-TASRKIKIKAGFTHNLEVDFIGAPDPTATWT 37
>d1vcaa2 b.1.1.4 (A:1-90) Vascular cell adhesion molecule-1
(VCAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 30.5 bits (67), Expect = 0.024
Identities = 9/68 (13%), Positives = 22/68 (32%)
Query: 18 MHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTRNGSFVINNIAEKDTNVYTCTVSNAAGST 77
+ P Q+ + + +N ++ + + Y CT + +
Sbjct: 21 LTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKL 80
Query: 78 SKTIQMNV 85
K IQ+ +
Sbjct: 81 EKGIQVEI 88
>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 30.8 bits (68), Expect = 0.026
Identities = 5/35 (14%), Positives = 11/35 (31%), Gaps = 1/35 (2%)
Query: 53 FVINNIAEKDTNVYTCTVSNAAGS-TSKTIQMNVL 86
+ D Y C+ + + S + + V
Sbjct: 67 LHFEPVLPNDNGSYRCSANFQSNLIESHSTTLYVT 101
>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 30.3 bits (67), Expect = 0.027
Identities = 4/32 (12%), Positives = 12/32 (37%)
Query: 46 YVTRNGSFVINNIAEKDTNVYTCTVSNAAGST 77
+ ++ ++ D+ Y+C + T
Sbjct: 55 WAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGT 86
>d2nxyb2 b.1.1.3 (B:1098-1181) CD4 C2-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 84
Score = 30.0 bits (66), Expect = 0.031
Identities = 7/26 (26%), Positives = 9/26 (34%)
Query: 64 NVYTCTVSNAAGSTSKTIQMNVLVPP 89
+TCTV I + VL
Sbjct: 58 GTWTCTVLQNQKKVEFKIDIVVLAFQ 83
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 29.8 bits (66), Expect = 0.039
Identities = 7/31 (22%), Positives = 12/31 (38%)
Query: 52 SFVINNIAEKDTNVYTCTVSNAAGSTSKTIQ 82
+ I+ + D Y C V ST ++
Sbjct: 63 TLTISQCSLADDAAYQCVVGGEKCSTELFVK 93
>d1ncna_ b.1.1.1 (A:) CD86 (b7-2), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 30.2 bits (67), Expect = 0.039
Identities = 8/66 (12%), Positives = 22/66 (33%)
Query: 17 PMHSRYNYTNLPQSRNPGQVIKRYLKDLLYVTRNGSFVINNIAEKDTNVYTCTVSNAAGS 76
+ V +Y+ + + + + ++N+ KD +Y C + + +
Sbjct: 35 DQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIKDKGLYQCIIHHKKPT 94
Query: 77 TSKTIQ 82
I
Sbjct: 95 GMIRIH 100
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 97
Score = 29.5 bits (65), Expect = 0.051
Identities = 9/40 (22%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Query: 46 YVTRNGSFVINNIAEKDTNVYTCTVSNAAGS-TSKTIQMN 84
+ + N + KD Y C +NA G+ S+ +
Sbjct: 57 RLVAGDLVISNPVKAKDAGSYQCVATNARGTVVSREASLR 96
Score = 26.0 bits (56), Expect = 0.86
Identities = 7/63 (11%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Query: 88 PPFFKDEQQESVAIV--VNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYITFFLFFQR 145
P F+++ ++ + ++C P + W +G+ L++ +
Sbjct: 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDL 63
Query: 146 LLL 148
++
Sbjct: 64 VIS 66
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1
(ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 29.5 bits (65), Expect = 0.058
Identities = 3/44 (6%), Positives = 9/44 (20%)
Query: 46 YVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLVPP 89
+ + + ++C + N P
Sbjct: 55 GEPAEVTTTVLVRRDHHGAQFSCRTELDLRPQGLELFENTSAPY 98
>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor
receptor TrkA, different domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 28.9 bits (63), Expect = 0.079
Identities = 9/53 (16%), Positives = 18/53 (33%)
Query: 33 PGQVIKRYLKDLLYVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNV 85
+ + G + N ++ + TC N G ++Q+NV
Sbjct: 39 TELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNV 91
Score = 23.9 bits (50), Expect = 5.2
Identities = 8/61 (13%), Positives = 13/61 (21%), Gaps = 1/61 (1%)
Query: 88 PPFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYITFFLFFQRLL 147
P K Q + ++ V + + C G W L
Sbjct: 2 VPTLK-VQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTL 60
Query: 148 L 148
Sbjct: 61 A 61
>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 28.6 bits (62), Expect = 0.15
Identities = 11/45 (24%), Positives = 16/45 (35%), Gaps = 4/45 (8%)
Query: 46 YVTRNGSFVINNIAEKDTNV-YTCTVSNAAGSTSKTIQMNVLVPP 89
T I+ I + +TC N G + IQ L+ P
Sbjct: 65 RSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQ---LIYP 106
Score = 26.3 bits (56), Expect = 0.86
Identities = 7/57 (12%), Positives = 20/57 (35%)
Query: 89 PFFKDEQQESVAIVVNHPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYITFFLFFQR 145
P E++ + + + + C+ G + W +GS++ + +
Sbjct: 2 PVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVE 58
>d1fnla2 b.1.1.4 (A:87-175) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 89
Score = 27.6 bits (60), Expect = 0.24
Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 53 FVINNIAEKDTNVYTCTVSNAAGS-TSKTIQMNV 85
F I KD+ Y C + + +S+T+ + +
Sbjct: 53 FHIPKATLKDSGSYFCRGLVGSKNVSSETVNITI 86
>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27
[TaxId: 9606]}
Length = 89
Score = 27.5 bits (60), Expect = 0.26
Identities = 4/31 (12%), Positives = 13/31 (41%)
Query: 52 SFVINNIAEKDTNVYTCTVSNAAGSTSKTIQ 82
+++N T + +NA + + ++
Sbjct: 57 ILILHNCQLGMTGEVSFQAANAKSAANLKVK 87
>d1zxqa1 b.1.1.3 (A:87-192) Intercellular cell adhesion molecule-2
(ICAM-2) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 27.7 bits (60), Expect = 0.26
Identities = 7/56 (12%), Positives = 14/56 (25%), Gaps = 3/56 (5%)
Query: 88 PPFFKDEQQESVAIVVNHPMNISCSHYGV---PTPDFSWYKDGSLLRIQSHYITFF 140
PP + + V I C V + ++ L ++
Sbjct: 1 PPRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAP 56
>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor
tyro3, second domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 85
Score = 26.9 bits (58), Expect = 0.37
Identities = 7/37 (18%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 50 NGSFVINNIAEKDTNVYTCTVSNAAGST-SKTIQMNV 85
V+N + +++C N G S+T +++
Sbjct: 48 PSPSVLNVTGVTQSTMFSCEAHNLKGLASSRTATVHL 84
>d1fp5a2 b.1.1.2 (A:439-543) Immunoglobulin heavy chain epsilon
constant domain 4, CH4-epsilon {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 27.0 bits (59), Expect = 0.48
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 60 EKDTNVYTCTVSNAAGSTSKTIQMNV 85
+ + + C + A S S+T+Q V
Sbjct: 78 WEQKDEFICRAVHEAASPSQTVQRAV 103
>d1epfa1 b.1.1.4 (A:1-97) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 97
Score = 27.0 bits (58), Expect = 0.54
Identities = 9/37 (24%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 50 NGSFVINNIAEKDTNVYTCTVSNAAGSTSK-TIQMNV 85
+ + I N D +Y C V+ G+ S+ T+ + +
Sbjct: 59 SSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKI 95
>d1q0xl2 b.1.1.2 (L:108-212) Immunoglobulin light chain lambda
constant domain, CL-lambda {Human (Homo sapiens)
[TaxId: 9606]}
Length = 102
Score = 26.5 bits (58), Expect = 0.73
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 64 NVYTCTVSNAAGSTSKTI 81
+ Y+C V++ S++KT+
Sbjct: 82 SSYSCQVTHEGHSSNKTL 99
>d1nfde2 b.1.1.2 (E:108-215) Immunoglobulin light chain lambda
constant domain, CL-lambda {Hamster (Cricetulus
griseus) [TaxId: 10029]}
Length = 104
Score = 26.2 bits (57), Expect = 1.0
Identities = 5/22 (22%), Positives = 11/22 (50%)
Query: 61 KDTNVYTCTVSNAAGSTSKTIQ 82
K N +C V++ + K++
Sbjct: 78 KSHNRVSCQVTHEGETVEKSLS 99
>d1dn0b2 b.1.1.2 (B:121-225) Immunoglobulin heavy chain mu constant
domain 1, CH1-mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 25.9 bits (56), Expect = 1.2
Identities = 5/22 (22%), Positives = 9/22 (40%)
Query: 64 NVYTCTVSNAAGSTSKTIQMNV 85
C V + G+ K + + V
Sbjct: 84 EHVVCKVQHPNGNKEKNVPLPV 105
>d1rzfl2 b.1.1.2 (L:109-210) Immunoglobulin light chain lambda
constant domain, CL-lambda {Human (Homo sapiens)
[TaxId: 9606]}
Length = 102
Score = 25.7 bits (56), Expect = 1.3
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 61 KDTNVYTCTVSNAAGSTSKTI 81
K Y+C V++ + KT+
Sbjct: 79 KSHRSYSCQVTHEGSTVEKTV 99
>d1biha2 b.1.1.4 (A:99-209) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 111
Score = 25.8 bits (55), Expect = 1.3
Identities = 7/22 (31%), Positives = 8/22 (36%)
Query: 60 EKDTNVYTCTVSNAAGSTSKTI 81
D Y CT NAA +
Sbjct: 75 VSDIYKYVCTAKNAAVDEEVVL 96
>d1b4ra_ b.1.3.1 (A:) Polycystein-1, PKD-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 80
Score = 25.0 bits (54), Expect = 1.8
Identities = 7/39 (17%), Positives = 11/39 (28%)
Query: 47 VTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNV 85
V G + T ++ AGS + V
Sbjct: 40 VDAAGPAASHRYVLPGRYHVTAVLALGAGSALLGTDVQV 78
>d2fcba1 b.1.1.4 (A:6-90) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 85
Score = 24.2 bits (51), Expect = 3.4
Identities = 8/54 (14%), Positives = 13/54 (24%)
Query: 29 QSRNPGQVIKRYLKDLLYVTRNGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQ 82
I+ + L T D+ YTC + S +
Sbjct: 29 THSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLT 82
>d1o0va1 b.1.1.2 (A:228-330) Immunoglobulin heavy chain epsilon
constant domain 2, CH2-epsilon {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 24.3 bits (52), Expect = 3.7
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 64 NVYTCTVSNAAGSTSKTIQ 82
YTC V+ + + +
Sbjct: 82 RTYTCQVTYQGHTFEDSTK 100
>d1f2qa1 b.1.1.4 (A:4-85) IgE high affinity receptor alpha subunit
{Human (Homo sapiens) [TaxId: 9606]}
Length = 82
Score = 23.8 bits (50), Expect = 4.6
Identities = 6/30 (20%), Positives = 10/30 (33%)
Query: 53 FVINNIAEKDTNVYTCTVSNAAGSTSKTIQ 82
I N +D+ Y C S ++
Sbjct: 50 LNIVNAKFEDSGEYKCQHQQVNESEPVYLE 79
>d1k4za_ b.80.5.1 (A:) C-terminal domain of adenylylcyclase
associated protein {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 157
Score = 24.3 bits (53), Expect = 5.2
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 77 TSKTIQMNVLVPPFFKDEQQE 97
TS + +NV +P D+ E
Sbjct: 114 TSCSTAINVNLPIGEDDDYVE 134
>d1ucta2 b.1.1.4 (A:101-196) Ig alpha Fc receptor, FCARI (CD89)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 23.8 bits (51), Expect = 5.7
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 105 HPMNISCSHYGVPTPDFSWYKDGSLLRIQSHYITFFLFF 143
++++CS +P FS K+G L Q F
Sbjct: 20 ENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANF 58
>d1fnla1 b.1.1.4 (A:3-86) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 84
Score = 23.7 bits (50), Expect = 5.7
Identities = 5/30 (16%), Positives = 12/30 (40%)
Query: 53 FVINNIAEKDTNVYTCTVSNAAGSTSKTIQ 82
+ I+ D+ Y C + + S ++
Sbjct: 54 YFIDAATVNDSGEYRCQTNLSTLSDPVQLE 83
>d2nxyb1 b.1.1.1 (B:1001-1097) CD4 V-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 23.2 bits (49), Expect = 9.1
Identities = 9/38 (23%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
Query: 50 NGSFVINNIAEKDTNVYTCTVSNAAGSTSKTIQMNVLV 87
N +I N+ +D++ Y C V + + ++ +LV
Sbjct: 66 NFPLIIKNLKIEDSDTYICEVED------QKEEVQLLV 97
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.135 0.403
Gapped
Lambda K H
0.267 0.0524 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 563,140
Number of extensions: 23869
Number of successful extensions: 187
Number of sequences better than 10.0: 1
Number of HSP's gapped: 186
Number of HSP's successfully gapped: 111
Length of query: 148
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 71
Effective length of database: 1,350,386
Effective search space: 95877406
Effective search space used: 95877406
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.1 bits)