Query psy6362
Match_columns 157
No_of_seqs 128 out of 1297
Neff 9.0
Searched_HMMs 29240
Date Sat Aug 17 00:34:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6362.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6362hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 2.7E-26 9.1E-31 163.0 13.3 128 2-149 31-163 (169)
2 4gpm_A Engineered protein OR26 99.9 2E-25 6.9E-30 158.5 13.4 121 26-156 12-137 (169)
3 4b93_B Ankyrin repeat domain-c 99.9 3.1E-24 1.1E-28 162.4 15.3 135 2-156 80-219 (269)
4 2rfm_A Putative ankyrin repeat 99.9 1.2E-23 4E-28 150.6 13.8 135 2-156 29-168 (192)
5 1d9s_A Cyclin-dependent kinase 99.9 2.8E-24 9.4E-29 146.4 8.6 126 1-147 5-136 (136)
6 2y1l_E Darpin-8.4; hydrolase-i 99.9 2.3E-23 8E-28 146.5 13.5 122 25-156 21-147 (169)
7 1bi7_B P16INK4A, MTS1, multipl 99.9 4E-24 1.4E-28 148.8 7.9 131 5-156 9-145 (156)
8 3aji_A 26S proteasome non-ATPa 99.9 1.5E-22 5.2E-27 148.1 14.7 121 26-156 81-206 (231)
9 1ikn_D Protein (I-kappa-B-alph 99.9 5E-23 1.7E-27 151.6 12.2 121 26-156 53-185 (236)
10 3f6q_A Integrin-linked protein 99.9 1.4E-22 4.9E-27 143.6 14.0 121 26-156 13-139 (179)
11 3v30_A DNA-binding protein rfx 99.9 3.6E-23 1.2E-27 145.5 10.7 120 26-155 44-168 (172)
12 3v31_A Ankyrin repeat family A 99.9 1.4E-22 4.8E-27 141.9 13.5 121 26-156 11-136 (167)
13 3hra_A Ankyrin repeat family p 99.9 1.5E-22 5.1E-27 145.2 13.9 135 2-156 33-179 (201)
14 3f6q_A Integrin-linked protein 99.9 6.1E-23 2.1E-27 145.5 10.8 136 2-157 33-173 (179)
15 1ihb_A P18-INK4C(INK6), cyclin 99.9 2E-22 6.7E-27 140.2 12.6 109 29-147 48-162 (162)
16 1s70_B 130 kDa myosin-binding 99.9 3.2E-22 1.1E-26 151.5 14.5 135 2-156 67-266 (299)
17 1yyh_A HN1;, notch 1, ankyrin 99.9 3.8E-22 1.3E-26 148.6 14.7 121 26-156 65-191 (253)
18 1awc_B Protein (GA binding pro 99.9 2.8E-22 9.5E-27 138.7 12.9 122 24-156 8-134 (153)
19 1oy3_D Transcription factor in 99.9 1.6E-22 5.6E-27 151.5 12.4 104 43-156 150-259 (282)
20 1yyh_A HN1;, notch 1, ankyrin 99.9 2.3E-22 7.8E-27 149.9 13.1 121 26-156 98-224 (253)
21 3twr_A Tankyrase-2; ankyrin re 99.9 2.6E-22 9E-27 140.2 12.4 121 26-156 16-142 (165)
22 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.3E-22 4.5E-27 141.1 10.7 121 25-156 12-138 (162)
23 2jab_A H10-2-G3; HER2, darpin, 99.9 3E-22 1E-26 136.3 11.8 111 25-145 21-136 (136)
24 1oy3_D Transcription factor in 99.9 2.5E-22 8.7E-27 150.4 12.5 121 26-156 53-226 (282)
25 2dzn_A Probable 26S proteasome 99.9 6.1E-22 2.1E-26 144.4 13.9 121 26-156 80-209 (228)
26 3aji_A 26S proteasome non-ATPa 99.9 8.8E-22 3E-26 144.0 14.5 121 26-156 48-173 (231)
27 2f8y_A Notch homolog 1, transl 99.9 1E-21 3.6E-26 142.9 14.6 117 29-155 69-191 (223)
28 2f8y_A Notch homolog 1, transl 99.9 1.2E-21 4E-26 142.6 14.5 132 5-156 22-159 (223)
29 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1E-21 3.5E-26 130.6 13.0 112 26-147 10-126 (126)
30 3v30_A DNA-binding protein rfx 99.9 8.6E-22 2.9E-26 138.5 13.2 123 24-156 8-136 (172)
31 4hbd_A KN motif and ankyrin re 99.9 2.2E-22 7.6E-27 152.4 10.7 135 2-156 105-251 (276)
32 3b7b_A Euchromatic histone-lys 99.9 1.2E-21 4.2E-26 143.8 14.2 121 26-156 85-211 (237)
33 2rfa_A Transient receptor pote 99.9 1E-21 3.4E-26 144.0 13.6 121 26-156 11-155 (232)
34 2xai_A ASB-9, ankyrin repeat a 99.9 1E-21 3.6E-26 147.0 14.0 128 2-149 30-161 (261)
35 1k1a_A B-cell lymphoma 3-encod 99.9 1.6E-21 5.5E-26 143.1 14.7 121 26-156 87-217 (241)
36 4b93_B Ankyrin repeat domain-c 99.9 2.8E-22 9.4E-27 151.7 9.7 116 31-156 66-186 (269)
37 2rfa_A Transient receptor pote 99.9 1.6E-21 5.6E-26 142.8 13.5 135 2-156 31-198 (232)
38 1n11_A Ankyrin; clathrin, BAND 99.9 1.8E-21 6.1E-26 154.9 14.6 122 25-156 252-378 (437)
39 2y1l_E Darpin-8.4; hydrolase-i 99.9 2.2E-21 7.6E-26 136.4 13.3 110 26-145 55-169 (169)
40 1k1a_A B-cell lymphoma 3-encod 99.9 2.8E-21 9.5E-26 141.9 14.4 121 26-156 54-184 (241)
41 2xai_A ASB-9, ankyrin repeat a 99.9 2E-21 7E-26 145.4 13.8 133 2-156 63-200 (261)
42 3v31_A Ankyrin repeat family A 99.9 1E-21 3.5E-26 137.4 11.3 128 2-149 30-162 (167)
43 2vge_A RELA-associated inhibit 99.9 1.3E-22 4.5E-27 150.0 6.5 120 26-155 29-156 (229)
44 2rfm_A Putative ankyrin repeat 99.9 2.2E-21 7.4E-26 138.8 12.5 124 2-145 62-190 (192)
45 1sw6_A Regulatory protein SWI6 99.9 4.3E-22 1.5E-26 154.1 9.1 136 2-156 124-317 (327)
46 3b7b_A Euchromatic histone-lys 99.9 4.5E-21 1.5E-25 140.7 14.1 121 26-156 52-178 (237)
47 3utm_A Tankyrase-1; tankyrase, 99.9 4.8E-21 1.6E-25 147.2 14.8 70 77-156 245-314 (351)
48 2etb_A Transient receptor pote 99.9 8.9E-22 3E-26 146.5 9.8 133 4-156 39-222 (256)
49 2dzn_A Probable 26S proteasome 99.9 6.8E-21 2.3E-25 138.8 14.3 133 4-156 32-175 (228)
50 3c5r_A BARD-1, BRCA1-associate 99.9 2.1E-21 7E-26 132.0 10.7 105 41-156 1-110 (137)
51 3d9h_A CDNA FLJ77766, highly s 99.9 4.6E-21 1.6E-25 145.5 13.6 111 29-149 103-217 (285)
52 3utm_A Tankyrase-1; tankyrase, 99.9 8.7E-21 3E-25 145.7 14.7 143 3-156 53-281 (351)
53 3twr_A Tankyrase-2; ankyrin re 99.9 1.7E-21 6E-26 136.0 9.6 110 26-146 50-164 (165)
54 3d9h_A CDNA FLJ77766, highly s 99.9 8.3E-21 2.8E-25 144.1 13.9 119 26-156 133-256 (285)
55 1bd8_A P19INK4D CDK4/6 inhibit 99.9 7.4E-21 2.5E-25 131.5 12.1 116 28-155 12-133 (156)
56 3kea_A K1L; tropism, ANK repea 99.8 1.8E-21 6.3E-26 147.8 8.9 118 26-153 103-226 (285)
57 3eu9_A Huntingtin-interacting 99.8 1.9E-20 6.5E-25 136.8 13.9 135 2-156 3-143 (240)
58 2pnn_A Transient receptor pote 99.8 3.6E-21 1.2E-25 144.6 10.2 120 26-155 109-267 (273)
59 1ikn_D Protein (I-kappa-B-alph 99.8 4.9E-21 1.7E-25 140.9 10.5 120 26-155 86-219 (236)
60 1d9s_A Cyclin-dependent kinase 99.8 3.6E-21 1.2E-25 130.9 8.9 105 41-156 2-112 (136)
61 1awc_B Protein (GA binding pro 99.8 1.8E-20 6.2E-25 129.6 12.6 107 25-141 41-152 (153)
62 1ycs_B 53BP2, P53BP2; ankyrin 99.8 2.8E-21 9.5E-26 143.2 9.0 115 29-154 16-135 (239)
63 3ljn_A Hypothetical protein; a 99.8 6.8E-21 2.3E-25 148.4 11.5 110 30-149 152-271 (364)
64 1bd8_A P19INK4D CDK4/6 inhibit 99.8 1.2E-20 4E-25 130.5 11.4 108 26-144 43-155 (156)
65 3ehr_A Osteoclast-stimulating 99.8 5.9E-22 2E-26 144.8 4.7 124 23-156 78-207 (222)
66 1n11_A Ankyrin; clathrin, BAND 99.8 1.8E-20 6E-25 149.1 13.5 132 2-153 8-144 (437)
67 3ljn_A Hypothetical protein; a 99.8 3.4E-21 1.2E-25 150.1 9.3 106 41-156 128-245 (364)
68 3jxi_A Vanilloid receptor-rela 99.8 2.2E-21 7.4E-26 144.5 7.6 118 25-152 100-255 (260)
69 3hra_A Ankyrin repeat family p 99.8 2.9E-20 1E-24 133.2 13.3 121 26-156 13-141 (201)
70 2etb_A Transient receptor pote 99.8 3.2E-21 1.1E-25 143.5 8.3 118 26-153 98-252 (256)
71 1ycs_B 53BP2, P53BP2; ankyrin 99.8 1.7E-21 5.6E-26 144.4 6.1 118 26-153 45-170 (239)
72 1s70_B 130 kDa myosin-binding 99.8 2.4E-20 8.1E-25 141.2 12.6 124 23-156 45-233 (299)
73 1wdy_A 2-5A-dependent ribonucl 99.8 5.3E-20 1.8E-24 137.4 14.0 119 25-153 155-284 (285)
74 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.5E-20 8.4E-25 119.0 10.2 88 50-147 1-93 (93)
75 1wdy_A 2-5A-dependent ribonucl 99.8 1E-19 3.6E-24 135.8 14.7 122 25-156 46-183 (285)
76 3jxi_A Vanilloid receptor-rela 99.8 1.7E-20 5.9E-25 139.7 9.4 119 28-156 59-226 (260)
77 3eu9_A Huntingtin-interacting 99.8 2.3E-19 7.9E-24 131.0 14.9 123 24-156 82-211 (240)
78 4g8k_A 2-5A-dependent ribonucl 99.8 6.2E-20 2.1E-24 141.6 12.2 107 32-153 220-332 (337)
79 3aaa_C Myotrophin, protein V-1 99.8 1.4E-20 4.9E-25 125.7 7.3 95 26-130 15-114 (123)
80 3kea_A K1L; tropism, ANK repea 99.8 3E-20 1E-24 141.1 9.9 117 28-156 72-195 (285)
81 2pnn_A Transient receptor pote 99.8 1.9E-20 6.6E-25 140.6 8.7 118 29-156 68-234 (273)
82 3lvq_E ARF-GAP with SH3 domain 99.8 5.4E-20 1.8E-24 149.8 11.9 119 25-153 139-271 (497)
83 3aaa_C Myotrophin, protein V-1 99.8 6.2E-20 2.1E-24 122.6 9.9 99 48-156 4-107 (123)
84 4hbd_A KN motif and ankyrin re 99.8 1.7E-19 5.7E-24 136.5 13.3 129 2-145 139-273 (276)
85 2l6b_A NR1C; ankyrin, consensu 99.8 1.6E-20 5.5E-25 124.0 6.7 101 46-156 4-109 (115)
86 2fo1_E LIN-12 protein; beta-ba 99.8 7.8E-20 2.7E-24 143.6 11.7 117 30-156 211-347 (373)
87 2fo1_E LIN-12 protein; beta-ba 99.8 7.4E-20 2.5E-24 143.7 11.4 135 2-156 160-314 (373)
88 4g8k_A 2-5A-dependent ribonucl 99.8 1.8E-19 6.3E-24 138.9 13.3 123 24-156 31-203 (337)
89 3c5r_A BARD-1, BRCA1-associate 99.8 8.9E-21 3E-25 128.9 4.9 122 5-146 7-133 (137)
90 3t8k_A Uncharacterized protein 99.8 1.1E-20 3.9E-25 135.8 4.3 114 30-153 54-185 (186)
91 1dcq_A PYK2-associated protein 99.8 3.6E-19 1.2E-23 135.3 12.8 115 28-152 140-268 (278)
92 2vge_A RELA-associated inhibit 99.8 2.2E-19 7.7E-24 132.6 9.6 112 35-156 2-122 (229)
93 2jab_A H10-2-G3; HER2, darpin, 99.8 3.6E-19 1.2E-23 120.9 8.7 100 47-156 10-114 (136)
94 3deo_A Signal recognition part 99.8 7E-19 2.4E-23 125.2 10.2 99 25-134 51-155 (183)
95 3ehr_A Osteoclast-stimulating 99.8 3.2E-19 1.1E-23 130.2 8.6 101 46-156 68-174 (222)
96 3ui2_A Signal recognition part 99.8 3.4E-19 1.2E-23 132.6 8.5 112 25-147 52-185 (244)
97 2b0o_E UPLC1; arfgap, structur 99.8 5.6E-19 1.9E-23 135.6 9.8 113 26-148 159-285 (301)
98 1n0r_A 4ANK, 4 ankyrin repeats 99.8 1.6E-18 5.5E-23 115.0 10.8 97 50-156 1-102 (126)
99 1sw6_A Regulatory protein SWI6 99.8 8.2E-19 2.8E-23 135.6 9.2 110 26-144 105-227 (327)
100 1bi7_B P16INK4A, MTS1, multipl 99.8 8.3E-19 2.8E-23 121.7 7.5 102 44-156 5-112 (156)
101 3deo_A Signal recognition part 99.8 5.9E-19 2E-23 125.6 6.7 98 48-156 41-144 (183)
102 3jue_A Arfgap with coiled-coil 99.8 2.8E-18 9.7E-23 135.3 11.0 109 29-147 211-326 (368)
103 3t8k_A Uncharacterized protein 99.8 3.6E-19 1.2E-23 127.9 4.3 119 26-156 14-155 (186)
104 3ui2_A Signal recognition part 99.7 4.1E-18 1.4E-22 126.7 7.2 98 48-156 42-145 (244)
105 2zgd_A 3 repeat synthetic anky 99.7 1.3E-16 4.6E-21 104.7 8.1 89 43-141 16-109 (110)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.6 1E-15 3.5E-20 97.2 8.7 78 26-112 10-92 (93)
107 2l6b_A NR1C; ankyrin, consensu 99.6 2E-16 6.9E-21 104.1 5.3 102 5-126 6-112 (115)
108 3jue_A Arfgap with coiled-coil 99.6 9.3E-16 3.2E-20 120.9 8.4 98 49-156 197-302 (368)
109 1dcq_A PYK2-associated protein 99.6 4.5E-15 1.5E-19 112.6 10.1 96 51-156 130-239 (278)
110 3lvq_E ARF-GAP with SH3 domain 99.6 3.9E-15 1.3E-19 121.1 9.2 95 52-156 133-241 (497)
111 2aja_A Ankyrin repeat family p 99.6 1.1E-16 3.8E-21 126.5 -0.0 114 23-146 97-223 (376)
112 2b0o_E UPLC1; arfgap, structur 99.6 7.4E-15 2.5E-19 112.6 9.8 96 51-156 151-260 (301)
113 2aja_A Ankyrin repeat family p 99.5 4.7E-15 1.6E-19 117.1 1.5 102 31-150 79-191 (376)
114 2zgd_A 3 repeat synthetic anky 99.4 2.9E-13 1E-17 88.5 7.7 70 26-95 32-106 (110)
115 3zrh_A Ubiquitin thioesterase 27.7 1.8E+02 0.0061 23.1 6.4 25 50-74 68-92 (454)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.94 E-value=2.7e-26 Score=163.04 Aligned_cols=128 Identities=27% Similarity=0.191 Sum_probs=73.5
Q ss_pred CccCCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CC
Q psy6362 2 NVVGSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VC 76 (157)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~ 76 (157)
|..++.|.++++++ +.....++++.|++.|++++.+|..|+||||+|+..|+.+++++|++.| ++
T Consensus 31 n~~d~~g~t~l~~a----------~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d 100 (169)
T 4gpm_A 31 NASDSDGRTPLHHA----------AENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKD 100 (169)
T ss_dssp TCCCTTSCCHHHHH----------HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCcCCCCCCHHHHH----------HHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCC
Confidence 44445555554443 3344455555566666666666666666666666666666666666655 45
Q ss_pred CCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcc
Q psy6362 77 SPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIF 149 (157)
Q Consensus 77 ~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 149 (157)
..|.||||+|+..++.+++ ++|++.|+ +++.+|.+|.|||++|+..|+.+++++|+++||+++
T Consensus 101 ~~G~TpLh~A~~~g~~~~v---------~~Ll~~ga-d~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 101 SDGRTPLHHAAENGHKEVV---------KLLISKGA-DVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp TTSCCHHHHHHHTTCHHHH---------HHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred CCCCCHHHHHHHcCCHHHH---------HHHHHcCC-CccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 5566666666666666666 66666666 666666666666666666666666666666666554
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.93 E-value=2e-25 Score=158.51 Aligned_cols=121 Identities=27% Similarity=0.197 Sum_probs=115.8
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhc
Q psy6362 26 VILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILI 100 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~ 100 (157)
+....+++++.|++.|+++|.+|..|+||||+|+..++.++++.|++.| ++..|.||||+|+..++.+++
T Consensus 12 a~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v----- 86 (169)
T 4gpm_A 12 AENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVV----- 86 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH-----
T ss_pred HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHH-----
Confidence 5566789999999999999999999999999999999999999999998 778899999999999999999
Q ss_pred cchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 101 TDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 101 ~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
++|++.|+ +++.+|.+|+||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus 87 ----~~Ll~~ga-dvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~ 137 (169)
T 4gpm_A 87 ----KLLISKGA-DVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGR 137 (169)
T ss_dssp ----HHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred ----HHHHHCcC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCC
Confidence 99999999 9999999999999999999999999999999999999999885
No 3
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.92 E-value=3.1e-24 Score=162.40 Aligned_cols=135 Identities=23% Similarity=0.163 Sum_probs=122.3
Q ss_pred CccCCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CC
Q psy6362 2 NVVGSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VC 76 (157)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~ 76 (157)
|..+..|.++++++ +.....+++++|++.|++++.++..|.||+|+|+..++.++++.|++.| ++
T Consensus 80 n~~d~~G~TpLh~A----------~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d 149 (269)
T 4b93_B 80 NVTSQDGSSPLHVA----------ALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKD 149 (269)
T ss_dssp TCCCTTSCCHHHHH----------HHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC
T ss_pred CCcCCCCCCHHHHH----------HHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCC
Confidence 55566666666654 5566788999999999999999999999999999999999999999988 67
Q ss_pred CCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 77 SPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 77 ~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
..|.||||+|+..++.+++ ++|++.|+ +++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus 150 ~~g~TpL~~A~~~g~~~~v---------~~Ll~~ga-dvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~ 219 (269)
T 4b93_B 150 LSGNTPLIYACSGGHHELV---------ALLLQHGA-SINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQR 219 (269)
T ss_dssp TTCCCHHHHHHHTTCGGGH---------HHHHHTTC-CTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSC
T ss_pred CCCCCHHHHHHHCCCHHHH---------HHHHHCCC-CCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC
Confidence 8899999999999999999 99999999 9999999999999999999999999999999999999999886
No 4
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.91 E-value=1.2e-23 Score=150.65 Aligned_cols=135 Identities=22% Similarity=0.247 Sum_probs=124.1
Q ss_pred CccCCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CC
Q psy6362 2 NVVGSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VC 76 (157)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~ 76 (157)
|..++.|.++++++ +.....++++.|++.|++++.++..|.||||+|+..++.+++++|++.+ .+
T Consensus 29 n~~d~~g~t~L~~A----------~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 98 (192)
T 2rfm_A 29 NYRDSYNRTPLMVA----------CMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKD 98 (192)
T ss_dssp TCCCTTCCCHHHHH----------HHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCC
T ss_pred hCcCCCCCCHHHHH----------HHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 55667777777775 6667789999999999999999999999999999999999999999988 67
Q ss_pred CCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 77 SPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 77 ~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
..|.||||+|+..++.+++ ++|++.++ +++.++..|.||||+|+..++.+++++|+++|++++.++..|+
T Consensus 99 ~~g~t~L~~A~~~~~~~~v---------~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 168 (192)
T 2rfm_A 99 FSGKTPLMWSIIFGYSEMS---------YFLLEHGA-NVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGL 168 (192)
T ss_dssp TTSCCHHHHHHHHTCHHHH---------HHHHHTTC-CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSC
T ss_pred CCCCcHHHHHHHcCCHHHH---------HHHHHCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC
Confidence 7899999999999999999 99999999 9999999999999999999999999999999999999998775
No 5
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=2.8e-24 Score=146.43 Aligned_cols=126 Identities=16% Similarity=0.037 Sum_probs=116.8
Q ss_pred CCccCCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----C
Q psy6362 1 MNVVGSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----V 75 (157)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~ 75 (157)
+|..++.|.++++++ +.....++++.|++.|++++.++..|+||||+|+. ++.+++++|++.+ +
T Consensus 5 ~~~~~~~g~t~L~~A----------~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~ 73 (136)
T 1d9s_A 5 IHMLGGSSDAGLATA----------AARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCA 73 (136)
T ss_dssp CSCCCCCCSCHHHHH----------HHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCC
T ss_pred ccCCCCCCccHHHHH----------HHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCc
Confidence 467788888888886 66667899999999999999999999999999999 9999999999988 6
Q ss_pred CCC-ChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCC
Q psy6362 76 CSP-GLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVH 147 (157)
Q Consensus 76 ~~~-~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~ 147 (157)
+.. |.||||+|+..++.+++ ++|++.++ +++.++..|.|||++|+..++.+++++|+++|++
T Consensus 74 ~~~~g~t~L~~A~~~~~~~~v---------~~Ll~~ga-~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 74 DPATLTRPVHDAAREGFLDTL---------VVLHRAGA-RLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp BTTTTBCHHHHHHHHTCHHHH---------HHHHHTCC-CCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCCCCHHHHHHHcCCHHHH---------HHHHHcCC-CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 667 89999999999999999 99999999 9999999999999999999999999999999986
No 6
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.91 E-value=2.3e-23 Score=146.53 Aligned_cols=122 Identities=30% Similarity=0.273 Sum_probs=115.6
Q ss_pred hHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhh
Q psy6362 25 LVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVIL 99 (157)
Q Consensus 25 ~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~ 99 (157)
++.....++++.|++.|++++.++..|.||||+|+..++.+++++|++.+ .+..|.||||+|+..++.+++
T Consensus 21 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~---- 96 (169)
T 2y1l_E 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIV---- 96 (169)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH----
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHH----
Confidence 36677899999999999999999999999999999999999999999988 677899999999999999999
Q ss_pred ccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 100 ITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 100 ~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
++|++.++ +++.++..|.||||+|+..++.+++++|+++|++++.++..|+
T Consensus 97 -----~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 147 (169)
T 2y1l_E 97 -----EVLLKNGA-DVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGK 147 (169)
T ss_dssp -----HHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred -----HHHHHcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 99999999 9999999999999999999999999999999999999988775
No 7
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=4e-24 Score=148.79 Aligned_cols=131 Identities=18% Similarity=0.055 Sum_probs=109.7
Q ss_pred CCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCC
Q psy6362 5 GSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPG 79 (157)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~ 79 (157)
..+|-++++++ +.....++++.|++.|++++.++..|+||||+|+ .++.+++++|++.| ++..|
T Consensus 9 ~~~~~t~L~~A----------~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g 77 (156)
T 1bi7_B 9 MEPSADWLATA----------AARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPAT 77 (156)
T ss_dssp -CCSTTHHHHH----------HHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTT
T ss_pred CccchHHHHHH----------HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCC
Confidence 44566666665 6677889999999999999999999999999985 89999999999988 67788
Q ss_pred hh-HHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 80 LH-DWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 80 ~t-~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
.| |||+|+..++.+++ ++|++.|+ +++.++..|.||||+|+..++.+++++|+++|++++.++..|+
T Consensus 78 ~ttpL~~A~~~~~~~~v---------~~Ll~~ga-~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 145 (156)
T 1bi7_B 78 LTRPVHDAAREGFLDTL---------VVLHRAGA-RLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARI 145 (156)
T ss_dssp CCCHHHHHHHHTCHHHH---------HHHHHHTC-CSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------
T ss_pred CcHHHHHHHHCCCHHHH---------HHHHHcCC-CCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcC
Confidence 98 99999999999999 99999999 9999999999999999999999999999999999999988774
No 8
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.89 E-value=1.5e-22 Score=148.10 Aligned_cols=121 Identities=21% Similarity=0.115 Sum_probs=103.4
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhc
Q psy6362 26 VILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILI 100 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~ 100 (157)
+.....++++.|+++|++++.++..|.||||+|+..++.+++++|++.+ .+..+.||+|+|+..++.+++
T Consensus 81 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v----- 155 (231)
T 3aji_A 81 ASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV----- 155 (231)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH-----
T ss_pred HHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHH-----
Confidence 4455677888888888888888888888888888888888888888877 566788889988888888888
Q ss_pred cchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 101 TDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 101 ~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
++|++.++ +++.++..|.||||+|+..++.+++++|+++|++++.+|..|+
T Consensus 156 ----~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 206 (231)
T 3aji_A 156 ----HILLFYKA-STNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEK 206 (231)
T ss_dssp ----HHHHHTTC-CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSC
T ss_pred ----HHHHhcCC-CccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 88888888 8888888899999999999999999999999999988888775
No 9
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.89 E-value=5e-23 Score=151.59 Aligned_cols=121 Identities=21% Similarity=0.099 Sum_probs=112.0
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----------CCCCChhHHHHHHhcCCcce
Q psy6362 26 VILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----------VCSPGLHDWFWTLGIEHVCN 94 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----------~~~~~~t~l~~a~~~~~~~~ 94 (157)
+.....+++++|+++|++++.++..|.||||+|+..++.+++++|++.+ .+..|.||||+|+..++.++
T Consensus 53 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 132 (236)
T 1ikn_D 53 VITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGI 132 (236)
T ss_dssp HHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHH
Confidence 5556788999999999999999999999999999999999999999875 45679999999999999999
Q ss_pred ehhhhccchhHHhhhcCCCCCccCCC-CCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 95 VLVILITDDDVILLRNRATNLNARMH-DGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 95 v~~~~~~~~~~~ll~~~~~~~~~~~~-~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
+ ++|++.|+ +++.++. .|.||||+|+..++.+++++|+++|++++.++..|+
T Consensus 133 v---------~~Ll~~g~-~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 185 (236)
T 1ikn_D 133 V---------ELLVSLGA-DVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGY 185 (236)
T ss_dssp H---------HHHHHHTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCC
T ss_pred H---------HHHHHcCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCC
Confidence 9 99999999 9999987 999999999999999999999999999999998875
No 10
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.89 E-value=1.4e-22 Score=143.61 Aligned_cols=121 Identities=22% Similarity=0.152 Sum_probs=103.0
Q ss_pred HhhhhhhhHHHHHhc-CCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhh
Q psy6362 26 VILITVDDVILLRNR-ATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVIL 99 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~-g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~ 99 (157)
+.....++++.|++. +.+++.++..|+||||+|+..++.+++++|++.+ .+..|.||||+|+..++.+++
T Consensus 13 ~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v---- 88 (179)
T 3f6q_A 13 CREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIV---- 88 (179)
T ss_dssp HHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH----
T ss_pred HHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHH----
Confidence 556667777777776 7778888888889999999988889999888887 667788899999888888888
Q ss_pred ccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 100 ITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 100 ~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
++|++.|+ +++.++..|.||||+|+..++.+++++|+++|++++.++..|+
T Consensus 89 -----~~Ll~~g~-~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 139 (179)
T 3f6q_A 89 -----QKLLQYKA-DINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGE 139 (179)
T ss_dssp -----HHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSC
T ss_pred -----HHHHHcCC-CCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCC
Confidence 88888888 8888888889999999988888999999988998888888775
No 11
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.89 E-value=3.6e-23 Score=145.54 Aligned_cols=120 Identities=19% Similarity=0.201 Sum_probs=92.6
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhc
Q psy6362 26 VILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILI 100 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~ 100 (157)
+.....+++++|++.|++++.++..|.||||+|+..++.+++++|++.+ .+..|.||||+|+..++.+++
T Consensus 44 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v----- 118 (172)
T 3v30_A 44 SAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCV----- 118 (172)
T ss_dssp HHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHH-----
T ss_pred HHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH-----
Confidence 4556677788888888888888888888888888888888888888777 566778888888888888888
Q ss_pred cchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCC
Q psy6362 101 TDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENIN 155 (157)
Q Consensus 101 ~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g 155 (157)
++|++.|+ +++.++..|.||+++|+..++.+++++|+++|+++..++..|
T Consensus 119 ----~~Ll~~ga-~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~ 168 (172)
T 3v30_A 119 ----EALLARGA-DLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVP 168 (172)
T ss_dssp ----HHHHHTTC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC----
T ss_pred ----HHHHHcCC-CccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCC
Confidence 88888887 888888888888888888888888888888887777666544
No 12
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.89 E-value=1.4e-22 Score=141.88 Aligned_cols=121 Identities=17% Similarity=0.061 Sum_probs=112.7
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhc
Q psy6362 26 VILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILI 100 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~ 100 (157)
+.....++++.|++.|.+++.++..|.||||+|+..++.+++++|++.+ .+..+.||+|+|+..++.+++
T Consensus 11 ~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v----- 85 (167)
T 3v31_A 11 AAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIV----- 85 (167)
T ss_dssp HHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHH-----
T ss_pred HHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHH-----
Confidence 5667788999999999999999999999999999999999999999988 677889999999999999999
Q ss_pred cchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 101 TDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 101 ~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
++|++.++ +++.++..|.||||+|+..++.+++++|+++|++++.++..|+
T Consensus 86 ----~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 136 (167)
T 3v31_A 86 ----KMLLDCGV-DVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGY 136 (167)
T ss_dssp ----HHHHHHTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred ----HHHHHCCC-CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 99999999 9999999999999999999999999999999999999988775
No 13
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.89 E-value=1.5e-22 Score=145.21 Aligned_cols=135 Identities=18% Similarity=0.157 Sum_probs=120.4
Q ss_pred CccCCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC------C
Q psy6362 2 NVVGSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF------V 75 (157)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~------~ 75 (157)
|..+..|.++++++ +.....+++++|+++|++++.++..|.||||+|+..++.+++++|++.+ .
T Consensus 33 ~~~~~~g~t~L~~A----------~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~ 102 (201)
T 3hra_A 33 DEVDTEGNTPLNIA----------VHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKH 102 (201)
T ss_dssp TCCCTTSCCHHHHH----------HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCC
T ss_pred CCCCCCCCCHHHHH----------HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccc
Confidence 44555666666554 5667789999999999999999999999999999999999999999544 6
Q ss_pred CCCChhHHHHHHhcCCcceehhhhccchhHHhhhcC-CCCCccCCCCCCcHHHHHHHhCC-----HHHHHHHHHcCCCcc
Q psy6362 76 CSPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNR-ATNLNARMHDGTTPLILAARLAI-----EGMVEDLINFFVHIF 149 (157)
Q Consensus 76 ~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~-~~~~~~~~~~g~tpl~~A~~~~~-----~~~~~~Ll~~ga~~~ 149 (157)
+..|.||+|+|+..++.+++ ++|++.+ + +++.++..|.||||+|+..+. .+++++|+++|++++
T Consensus 103 ~~~g~t~L~~A~~~~~~~~v---------~~Ll~~g~~-~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~ 172 (201)
T 3hra_A 103 NRYGGNALIPAAEKGHIDNV---------KLLLEDGRE-DIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQS 172 (201)
T ss_dssp CTTSCCSHHHHHHTTCHHHH---------HHHHHHCCC-CTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTT
T ss_pred cCCCCcHHHHHHHcCCHHHH---------HHHHHcCCC-CcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCC
Confidence 77899999999999999999 9999998 6 899999999999999999987 899999999999999
Q ss_pred eeccCCC
Q psy6362 150 FKENINK 156 (157)
Q Consensus 150 ~~~~~g~ 156 (157)
.++..|+
T Consensus 173 ~~~~~g~ 179 (201)
T 3hra_A 173 IKDNSGR 179 (201)
T ss_dssp CCCTTSC
T ss_pred ccCCCCC
Confidence 9998875
No 14
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.89 E-value=6.1e-23 Score=145.52 Aligned_cols=136 Identities=19% Similarity=0.084 Sum_probs=122.2
Q ss_pred CccCCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CC
Q psy6362 2 NVVGSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VC 76 (157)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~ 76 (157)
|..+..|.++++++ +.....+++++|++.|++++.++..|.||||+|+..++.+++++|++.| .+
T Consensus 33 ~~~~~~g~t~L~~A----------~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d 102 (179)
T 3f6q_A 33 NQGDDHGFSPLHWA----------CREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102 (179)
T ss_dssp TCCCTTSCCHHHHH----------HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred cccCCCCCCHHHHH----------HHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC
Confidence 34455555555554 5566789999999999999999999999999999999999999999998 67
Q ss_pred CCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 77 SPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 77 ~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
..|.||||+|+..++.+++ ++|++.|+ +++.++..|.||+++|+..++.++++.|+++|++++.....+.
T Consensus 103 ~~g~t~L~~A~~~~~~~~v---------~~Ll~~ga-~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~~~~ 172 (179)
T 3f6q_A 103 EHGNVPLHYACFWGQDQVA---------EDLVANGA-LVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYKDT 172 (179)
T ss_dssp TTSCCHHHHHHHTTCHHHH---------HHHHHTTC-CSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBCCCCT
T ss_pred CCCCCHHHHHHHcCCHHHH---------HHHHHCCC-CcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCCcccc
Confidence 8899999999999999999 99999999 9999999999999999999999999999999999998887765
Q ss_pred C
Q psy6362 157 F 157 (157)
Q Consensus 157 ~ 157 (157)
|
T Consensus 173 ~ 173 (179)
T 3f6q_A 173 F 173 (179)
T ss_dssp T
T ss_pred c
Confidence 4
No 15
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.89 E-value=2e-22 Score=140.20 Aligned_cols=109 Identities=18% Similarity=0.073 Sum_probs=69.9
Q ss_pred hhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhccch
Q psy6362 29 ITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILITDD 103 (157)
Q Consensus 29 ~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~~~~ 103 (157)
...++++.|++.|++++.++..|.||||+|+..++.+++++|++.+ ++..|.||||+|+..++.+++
T Consensus 48 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v-------- 119 (162)
T 1ihb_A 48 GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVV-------- 119 (162)
T ss_dssp SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH--------
T ss_pred CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHH--------
Confidence 4456666666666666666666666666666666666666666665 455566666666666666666
Q ss_pred hHHhhhcCCCC-CccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCC
Q psy6362 104 DVILLRNRATN-LNARMHDGTTPLILAARLAIEGMVEDLINFFVH 147 (157)
Q Consensus 104 ~~~ll~~~~~~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~ 147 (157)
++|++.++ + ++..+..|.||+++|+..++.+++++|+++||+
T Consensus 120 -~~Ll~~g~-~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 120 -EFLVKHTA-SNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp -HHHHHHSC-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred -HHHHHccC-CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 66666666 4 466666666666666666666666666666654
No 16
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.89 E-value=3.2e-22 Score=151.54 Aligned_cols=135 Identities=24% Similarity=0.209 Sum_probs=118.2
Q ss_pred CccCCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CC
Q psy6362 2 NVVGSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VC 76 (157)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~ 76 (157)
|..+..|.++++++ +.....+++++|++.|++++.+|..|.||||+|+..|+.+++++|++.| .+
T Consensus 67 ~~~~~~g~t~L~~A----------~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~ 136 (299)
T 1s70_B 67 NYANVDGLTALHQA----------CIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVN 136 (299)
T ss_dssp TCBCTTCCBHHHHH----------HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred cccCCCCCCHHHHH----------HHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcC
Confidence 44455555555554 5566789999999999999999999999999999999999999999877 11
Q ss_pred ------------------------------------------------------------CCChhHHHHHHhcCCcceeh
Q psy6362 77 ------------------------------------------------------------SPGLHDWFWTLGIEHVCNVL 96 (157)
Q Consensus 77 ------------------------------------------------------------~~~~t~l~~a~~~~~~~~v~ 96 (157)
..|.||||+|+..++.+++
T Consensus 137 ~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v- 215 (299)
T 1s70_B 137 SEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVL- 215 (299)
T ss_dssp TTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHH-
T ss_pred CCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHH-
Confidence 2477899999999999999
Q ss_pred hhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 97 VILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 97 ~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
++|++.|+ +++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus 216 --------~~Ll~~g~-d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~ 266 (299)
T 1s70_B 216 --------KLLIQARY-DVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQ 266 (299)
T ss_dssp --------HHHHTTTC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred --------HHHHHcCC-CCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 99999999 9999999999999999999999999999999999999998886
No 17
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.89 E-value=3.8e-22 Score=148.63 Aligned_cols=121 Identities=18% Similarity=0.113 Sum_probs=81.4
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC------CCCCChhHHHHHHhcCCcceehhhh
Q psy6362 26 VILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF------VCSPGLHDWFWTLGIEHVCNVLVIL 99 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~------~~~~~~t~l~~a~~~~~~~~v~~~~ 99 (157)
+.....++++.|++.|++++.++..|+||||+|+..++.+++++|++.+ .+..|.||||+|+..++.+++
T Consensus 65 ~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v---- 140 (253)
T 1yyh_A 65 ARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGML---- 140 (253)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHH----
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHH----
Confidence 4445567777777777777777777777777777777777777777665 445566666666666666666
Q ss_pred ccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 100 ITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 100 ~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
++|++.++ +++.++..|.||||+|+..++.+++++|+++|++++.++..|+
T Consensus 141 -----~~Ll~~g~-~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 191 (253)
T 1yyh_A 141 -----EDLINSHA-DVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREE 191 (253)
T ss_dssp -----HHHHHTTC-CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred -----HHHHHcCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 66666666 6666666666666666666666666666666666666655553
No 18
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.89 E-value=2.8e-22 Score=138.74 Aligned_cols=122 Identities=22% Similarity=0.149 Sum_probs=113.2
Q ss_pred HhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhh
Q psy6362 24 VLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVI 98 (157)
Q Consensus 24 ~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~ 98 (157)
.++.....++++.|++.|.+++ ++..|.||||+|+..|+.+++++|++.+ .+..|.||||+|+..++.+++
T Consensus 8 ~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v--- 83 (153)
T 1awc_B 8 EAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIV--- 83 (153)
T ss_dssp HHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHH---
T ss_pred HHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHH---
Confidence 3466677899999999999887 6889999999999999999999999988 677899999999999999999
Q ss_pred hccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 99 LITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 99 ~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
++|++.|+ +++.++..|.||||+|+..++.+++++|+++|++++.++..|+
T Consensus 84 ------~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 134 (153)
T 1awc_B 84 ------EVLLKHGA-DVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCK 134 (153)
T ss_dssp ------HHHHTTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred ------HHHHHcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCC
Confidence 99999999 9999999999999999999999999999999999999998875
No 19
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.89 E-value=1.6e-22 Score=151.47 Aligned_cols=104 Identities=23% Similarity=0.085 Sum_probs=94.5
Q ss_pred CcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CC-CCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCc
Q psy6362 43 NLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VC-SPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLN 116 (157)
Q Consensus 43 ~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~-~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~ 116 (157)
+++.++..|.||||+|+..|+.+++++|++.| .+ ..|.||||+|+..++.+++ ++|++.|+ +++
T Consensus 150 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v---------~~Ll~~ga-d~~ 219 (282)
T 1oy3_D 150 QLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVL---------ELLLKAGA-DPT 219 (282)
T ss_dssp GTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHH---------HHHHHTTC-CTT
T ss_pred cCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHH---------HHHHHcCC-CCc
Confidence 37888999999999999999999999999998 33 3499999999999999999 99999999 999
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 117 ARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 117 ~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
.++..|.||||+|+..++.+++++|+++|++++.++..|+
T Consensus 220 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 259 (282)
T 1oy3_D 220 ARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKL 259 (282)
T ss_dssp CCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC----
T ss_pred ccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCccc
Confidence 9999999999999999999999999999999999998875
No 20
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.89 E-value=2.3e-22 Score=149.87 Aligned_cols=121 Identities=39% Similarity=0.554 Sum_probs=113.4
Q ss_pred HhhhhhhhHHHHHhcCC-CcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhh
Q psy6362 26 VILITVDDVILLRNRAT-NLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVIL 99 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~-~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~ 99 (157)
+.....+++++|++.|. +++.++..|.||||+|+..++.+++++|++.| .+..|.||||+|+..++.+++
T Consensus 98 ~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v---- 173 (253)
T 1yyh_A 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAA---- 173 (253)
T ss_dssp HHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHH----
T ss_pred HHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHH----
Confidence 45566789999999987 99999999999999999999999999999988 677899999999999999999
Q ss_pred ccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 100 ITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 100 ~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
++|++.|+ +++.++..|.||||+|+..++.+++++|+++|++++.+|..|+
T Consensus 174 -----~~Ll~~ga-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~ 224 (253)
T 1yyh_A 174 -----VVLLKNGA-NKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDR 224 (253)
T ss_dssp -----HHHHHTTC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred -----HHHHHcCC-CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCC
Confidence 99999999 9999999999999999999999999999999999999998886
No 21
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.89 E-value=2.6e-22 Score=140.23 Aligned_cols=121 Identities=21% Similarity=0.057 Sum_probs=112.1
Q ss_pred HhhhhhhhHHHHHh-cCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhh
Q psy6362 26 VILITVDDVILLRN-RATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVIL 99 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~-~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~ 99 (157)
+.....++++.|++ .+.+++.++..|.||||+|+..++.+++++|++.+ .+..|.||||+|+..++.+++
T Consensus 16 ~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v---- 91 (165)
T 3twr_A 16 AKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVA---- 91 (165)
T ss_dssp HHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH----
T ss_pred HHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHH----
Confidence 56677888888887 67788888999999999999999999999999988 677899999999999999999
Q ss_pred ccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 100 ITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 100 ~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
++|++.++ +++.++..|.||||+|+..++.+++++|+++|++++.++..|+
T Consensus 92 -----~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 142 (165)
T 3twr_A 92 -----ELLVKHGA-VVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGN 142 (165)
T ss_dssp -----HHHHHTTC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred -----HHHHhCCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC
Confidence 99999999 9999999999999999999999999999999999999998875
No 22
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.88 E-value=1.3e-22 Score=141.06 Aligned_cols=121 Identities=18% Similarity=0.129 Sum_probs=113.5
Q ss_pred hHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhh
Q psy6362 25 LVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVIL 99 (157)
Q Consensus 25 ~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~ 99 (157)
++.....++++.|++.|++++.++..|+||||+|+. ++.+++++|++.+ .+..|.||+|+|+..++.+++
T Consensus 12 A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v---- 86 (162)
T 1ihb_A 12 AAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTL---- 86 (162)
T ss_dssp HHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH----
T ss_pred HHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH----
Confidence 366778899999999999999999999999999999 9999999999988 677899999999999999999
Q ss_pred ccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCC-cceeccCCC
Q psy6362 100 ITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVH-IFFKENINK 156 (157)
Q Consensus 100 ~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~-~~~~~~~g~ 156 (157)
++|++.++ +++.++..|.||||+|+..++.+++++|+++|++ ++.++..|+
T Consensus 87 -----~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~ 138 (162)
T 1ihb_A 87 -----QTLLEFQA-DVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGD 138 (162)
T ss_dssp -----HHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSC
T ss_pred -----HHHHHcCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCC
Confidence 99999999 9999999999999999999999999999999998 588888775
No 23
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.88 E-value=3e-22 Score=136.29 Aligned_cols=111 Identities=25% Similarity=0.228 Sum_probs=104.8
Q ss_pred hHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhh
Q psy6362 25 LVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVIL 99 (157)
Q Consensus 25 ~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~ 99 (157)
++.....++++.|++.|++++.+|..|.||||+|+..++.+++++|++.+ .+..|.||||+|+..++.+++
T Consensus 21 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v---- 96 (136)
T 2jab_A 21 AARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIA---- 96 (136)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHH----
T ss_pred HHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHH----
Confidence 36677889999999999999999999999999999999999999999988 677899999999999999999
Q ss_pred ccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcC
Q psy6362 100 ITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFF 145 (157)
Q Consensus 100 ~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~g 145 (157)
++|++.|+ +++..+..|.|||++|+..++.+++++|+++|
T Consensus 97 -----~~Ll~~g~-~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 97 -----EVLLKHGA-DVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp -----HHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred -----HHHHHcCC-CCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999 99999999999999999999999999999886
No 24
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.88 E-value=2.5e-22 Score=150.41 Aligned_cols=121 Identities=21% Similarity=0.107 Sum_probs=106.2
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-------------------------------
Q psy6362 26 VILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF------------------------------- 74 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~------------------------------- 74 (157)
+.....+++++|+++|++++.++..|+||||+|+..++.+++++|++.+
T Consensus 53 ~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (282)
T 1oy3_D 53 AILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDS 132 (282)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC------------------------
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhcc
Confidence 4455678888999999999999999999999999999999999988743
Q ss_pred ---------------------CCCCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCC-CCcHHHHHHHh
Q psy6362 75 ---------------------VCSPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHD-GTTPLILAARL 132 (157)
Q Consensus 75 ---------------------~~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~-g~tpl~~A~~~ 132 (157)
.+..|.||||+|+..++.+++ ++|++.|+ +++.++.. |.||||+|+..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v---------~~Ll~~g~-~~~~~~~~~g~tpL~~A~~~ 202 (282)
T 1oy3_D 133 QPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMV---------RLLRDAGA-DLNKPEPTCGRTPLHLAVEA 202 (282)
T ss_dssp -----------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHH---------HHHHHHTC-CTTCCCTTTCCCHHHHHHHT
T ss_pred ccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHH---------HHHHHcCC-CCCCCCCCCCcCHHHHHHHc
Confidence 345688999999999999999 99999999 99988854 99999999999
Q ss_pred CCHHHHHHHHHcCCCcceeccCCC
Q psy6362 133 AIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 133 ~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
++.+++++|+++|++++.++..|+
T Consensus 203 ~~~~~v~~Ll~~gad~~~~d~~g~ 226 (282)
T 1oy3_D 203 QAASVLELLLKAGADPTARMYGGR 226 (282)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCHHHHHHHHHcCCCCcccccCCC
Confidence 999999999999999999998875
No 25
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.88 E-value=6.1e-22 Score=144.42 Aligned_cols=121 Identities=17% Similarity=0.066 Sum_probs=110.9
Q ss_pred HhhhhhhhHHHHHhcC--CCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhh
Q psy6362 26 VILITVDDVILLRNRA--TNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVI 98 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g--~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~ 98 (157)
+.....++++.|+++| ++++.++..|.||||+|+..++.+++++|++.| .+..|.||||+|+..++.+++
T Consensus 80 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v--- 156 (228)
T 2dzn_A 80 CSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLI--- 156 (228)
T ss_dssp HHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHH---
T ss_pred HHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHH---
Confidence 4556778999999998 899999999999999999999999999999988 677899999999999999999
Q ss_pred hccchhHHhhhcC-CCCCccCCCCCCcHHHHHHHhCCHHHHHHHH-HcCCCcceeccCCC
Q psy6362 99 LITDDDVILLRNR-ATNLNARMHDGTTPLILAARLAIEGMVEDLI-NFFVHIFFKENINK 156 (157)
Q Consensus 99 ~~~~~~~~ll~~~-~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll-~~ga~~~~~~~~g~ 156 (157)
++|++.+ + +++.++..|.||||+|+..++.++++.|+ ++|++++.+|..|+
T Consensus 157 ------~~Ll~~g~~-~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~ 209 (228)
T 2dzn_A 157 ------ELLCGLGKS-AVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGA 209 (228)
T ss_dssp ------HHHHTTTCC-CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSC
T ss_pred ------HHHHhcCcc-cccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCC
Confidence 9999998 7 89999999999999999999999999999 89999999998885
No 26
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.88 E-value=8.8e-22 Score=144.01 Aligned_cols=121 Identities=21% Similarity=0.167 Sum_probs=114.5
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhc
Q psy6362 26 VILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILI 100 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~ 100 (157)
+.....++++.|++.|++++.++..|+||||+|+..++.+++++|++.+ .+..|.||+|+|+..++.+++
T Consensus 48 ~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~----- 122 (231)
T 3aji_A 48 CSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIA----- 122 (231)
T ss_dssp HHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH-----
T ss_pred HHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH-----
Confidence 5667789999999999999999999999999999999999999999988 677899999999999999999
Q ss_pred cchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 101 TDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 101 ~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
++|++.++ +++..+..|.||||+|+..++.+++++|+++|++++.++..|+
T Consensus 123 ----~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 173 (231)
T 3aji_A 123 ----VMLLEGGA-NPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGN 173 (231)
T ss_dssp ----HHHHHTTC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSC
T ss_pred ----HHHHHcCC-CCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCC
Confidence 99999999 9999999999999999999999999999999999999988775
No 27
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.88 E-value=1e-21 Score=142.89 Aligned_cols=117 Identities=39% Similarity=0.564 Sum_probs=65.8
Q ss_pred hhhhhHHHHHhcCC-CcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhccc
Q psy6362 29 ITVDDVILLRNRAT-NLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILITD 102 (157)
Q Consensus 29 ~~~~~~~~Ll~~g~-~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~~~ 102 (157)
...++++.|++.+. +++.++..|.||||+|+..++.+++++|++.+ .+..|.||||+|+..++.+++
T Consensus 69 ~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v------- 141 (223)
T 2f8y_A 69 DAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAA------- 141 (223)
T ss_dssp TCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHH-------
T ss_pred CCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHH-------
Confidence 33445555555544 55555555555555555555555555555544 344455556665555555555
Q ss_pred hhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCC
Q psy6362 103 DDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENIN 155 (157)
Q Consensus 103 ~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g 155 (157)
++|++.|+ +++.++..|.||||+|+..++.+++++|+++|++++.++..|
T Consensus 142 --~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 191 (223)
T 2f8y_A 142 --VVLLKNGA-NKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMD 191 (223)
T ss_dssp --HHHHHTTC-CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred --HHHHHcCC-CCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccC
Confidence 55555555 555556566666666666666666666666666665555544
No 28
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.88 E-value=1.2e-21 Score=142.64 Aligned_cols=132 Identities=17% Similarity=0.110 Sum_probs=120.4
Q ss_pred CCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC------CCCC
Q psy6362 5 GSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF------VCSP 78 (157)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~------~~~~ 78 (157)
+..|.++++++ +.....++++.|++.|++++.++..|+||||+|+..++.+++++|++.+ .+..
T Consensus 22 d~~g~t~L~~A----------~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 91 (223)
T 2f8y_A 22 DRTGETALHLA----------ARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHD 91 (223)
T ss_dssp TTTCCCHHHHH----------HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTT
T ss_pred CCCCCchHHHH----------HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC
Confidence 44555555554 6667789999999999999999999999999999999999999999986 5678
Q ss_pred ChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 79 GLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 79 ~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
+.||+|+|+..++.+++ ++|++.++ +++..+..|.||||+|+..++.+++++|+++|++++.++..|+
T Consensus 92 g~t~L~~A~~~~~~~~~---------~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 159 (223)
T 2f8y_A 92 GTTPLILAARLAVEGML---------EDLINSHA-DVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREE 159 (223)
T ss_dssp CCCHHHHHHHHTCHHHH---------HHHHHTTC-CTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred CCcHHHHHHHhCcHHHH---------HHHHHcCC-CCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCc
Confidence 99999999999999999 99999999 9999999999999999999999999999999999999988775
No 29
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.88 E-value=1e-21 Score=130.63 Aligned_cols=112 Identities=29% Similarity=0.254 Sum_probs=106.4
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhc
Q psy6362 26 VILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILI 100 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~ 100 (157)
+.....++++.|++.|++++.++..|.||||+|+..++.+++++|++.+ .+..|.||+|+|+..++.+++
T Consensus 10 ~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~----- 84 (126)
T 1n0r_A 10 ARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV----- 84 (126)
T ss_dssp HHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH-----
T ss_pred HHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHH-----
Confidence 5667789999999999999999999999999999999999999999988 677899999999999999999
Q ss_pred cchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCC
Q psy6362 101 TDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVH 147 (157)
Q Consensus 101 ~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~ 147 (157)
++|++.++ +++.++..|.||+++|+..++.+++++|+++|++
T Consensus 85 ----~~Ll~~g~-~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 85 ----KLLLEAGA-DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp ----HHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred ----HHHHHcCC-CCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999 9999999999999999999999999999999986
No 30
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.88 E-value=8.6e-22 Score=138.47 Aligned_cols=123 Identities=20% Similarity=0.103 Sum_probs=114.5
Q ss_pred HhHhhhhhhhHHHHHhcCCC-cccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehh
Q psy6362 24 VLVILITVDDVILLRNRATN-LNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLV 97 (157)
Q Consensus 24 ~~~~~~~~~~~~~Ll~~g~~-i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~ 97 (157)
.++.....++++.+++.+.+ ++.++..|+||||+|+..++.+++++|++.| .+..+.||||+|+..++.+++
T Consensus 8 ~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v-- 85 (172)
T 3v30_A 8 QLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIV-- 85 (172)
T ss_dssp HHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHH--
T ss_pred HHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHH--
Confidence 34666778889999998887 8999999999999999999999999999988 677899999999999999999
Q ss_pred hhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 98 ILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 98 ~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
++|++.++ +++.++..|.||||+|+..++.+++++|+++|++++.++..|+
T Consensus 86 -------~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 136 (172)
T 3v30_A 86 -------GLLLERDV-DINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGY 136 (172)
T ss_dssp -------HHHHTTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred -------HHHHHcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCC
Confidence 99999999 9999999999999999999999999999999999999998775
No 31
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.88 E-value=2.2e-22 Score=152.36 Aligned_cols=135 Identities=19% Similarity=0.189 Sum_probs=120.6
Q ss_pred CccCCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCC-CcccccCCCCcHHHHHH-----HhCCHHHHHHHHHcC-
Q psy6362 2 NVVGSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRAT-NLNARMHDGTTPLILAA-----RLAIEGMVEDLINDF- 74 (157)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~-~i~~~~~~g~t~Lh~a~-----~~~~~~~~~~Ll~~~- 74 (157)
|..+..|.++++|+ +.....++++.|++.|+ +++.++..|.||||+|+ ..+..++++.|++.|
T Consensus 105 n~~d~~g~T~Lh~A----------~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~ 174 (276)
T 4hbd_A 105 NIADSNGNTALHYS----------VSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGN 174 (276)
T ss_dssp TCCCTTSCCHHHHH----------HHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSC
T ss_pred cCCCCCCCCHHHHH----------HHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCC
Confidence 66778888888886 56667889999999998 99999999999999999 667889999999988
Q ss_pred ----CCCCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHH-cCCCcc
Q psy6362 75 ----VCSPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLIN-FFVHIF 149 (157)
Q Consensus 75 ----~~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~-~ga~~~ 149 (157)
.+..|.||||+|+..++.+++ ++|++.|+ +++.+|..|.||||+|+..|+.+++++|++ .|++++
T Consensus 175 ~~~~~~~~g~tpLh~A~~~g~~~~v---------~~Ll~~ga-d~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~ 244 (276)
T 4hbd_A 175 INAKASQAGQTALMLAVSHGRVDVV---------KALLACEA-DVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDIS 244 (276)
T ss_dssp TTCCCTTTCCCHHHHHHHTTCHHHH---------HHHHHTTC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTT
T ss_pred CccccCCCCCCHHHHHHHcCCHHHH---------HHHHhCCC-CCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCc
Confidence 566799999999999999999 99999999 999999999999999999999999999999 899999
Q ss_pred eeccCCC
Q psy6362 150 FKENINK 156 (157)
Q Consensus 150 ~~~~~g~ 156 (157)
.+|..|+
T Consensus 245 ~~d~~g~ 251 (276)
T 4hbd_A 245 LTDRDGS 251 (276)
T ss_dssp CCCTTSC
T ss_pred CcCCCCC
Confidence 9998875
No 32
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.88 E-value=1.2e-21 Score=143.76 Aligned_cols=121 Identities=21% Similarity=0.145 Sum_probs=100.0
Q ss_pred HhhhhhhhHHHHHhcC-CCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhh
Q psy6362 26 VILITVDDVILLRNRA-TNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVIL 99 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g-~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~ 99 (157)
+.....++++.|++.| .+++.++..|.||||+|+..++.+++++|++.| .+..|.||+|+|+..++.+++
T Consensus 85 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~---- 160 (237)
T 3b7b_A 85 AKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIA---- 160 (237)
T ss_dssp HHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHH----
T ss_pred HHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHH----
Confidence 4455667788888887 788888888888888888888888888888877 566788888888888888888
Q ss_pred ccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 100 ITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 100 ~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
++|++.++ +++..+..|.||||+|+..++.+++++|+++|++++.+|..|+
T Consensus 161 -----~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~ 211 (237)
T 3b7b_A 161 -----EILLAAKC-DLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGE 211 (237)
T ss_dssp -----HHHHTTTC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSC
T ss_pred -----HHHHHcCC-CCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCC
Confidence 88888888 8888888888888888888888888888888888888887775
No 33
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.88 E-value=1e-21 Score=143.96 Aligned_cols=121 Identities=22% Similarity=0.143 Sum_probs=112.0
Q ss_pred HhhhhhhhHHHHHhc-CCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC----------CCCCChhHHHHHHhcCCcce
Q psy6362 26 VILITVDDVILLRNR-ATNLNARMHDGTTPLILAARLAIEGMVEDLINDF----------VCSPGLHDWFWTLGIEHVCN 94 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~-g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~----------~~~~~~t~l~~a~~~~~~~~ 94 (157)
+.....++++.|++. |++++.+|..|+||||+|+..|+.+++++|++.+ .+..|.||||+|+..++.++
T Consensus 11 ~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 90 (232)
T 2rfa_A 11 AKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNL 90 (232)
T ss_dssp HHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHH
T ss_pred HHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHH
Confidence 666778899999987 9999999999999999999999999999999987 34579999999999999999
Q ss_pred ehhhhccchhHHhhhcCCCCCccCCC-------------CCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 95 VLVILITDDDVILLRNRATNLNARMH-------------DGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 95 v~~~~~~~~~~~ll~~~~~~~~~~~~-------------~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
+ ++|++.++ +++..+. .|.||||+|+..++.+++++|+++|++++.+|..|+
T Consensus 91 v---------~~Ll~~g~-~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~ 155 (232)
T 2rfa_A 91 V---------RALLARGA-SVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGN 155 (232)
T ss_dssp H---------HHHHHTTC-CTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred H---------HHHHhCCC-CCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 9 99999999 9888765 799999999999999999999999999999998885
No 34
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.88 E-value=1e-21 Score=147.02 Aligned_cols=128 Identities=19% Similarity=0.088 Sum_probs=65.1
Q ss_pred CccCCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC----CCC
Q psy6362 2 NVVGSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF----VCS 77 (157)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~----~~~ 77 (157)
|..+..|.++++++ +.....++++.|++.|++++.++..|+||||+|+..|+.+++++|++.+ .+.
T Consensus 30 ~~~~~~g~t~L~~A----------~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 99 (261)
T 2xai_A 30 NIITADHVSPLHEA----------CLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES 99 (261)
T ss_dssp SCCCTTCCCHHHHH----------HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC
T ss_pred CCcCCCCCCHHHHH----------HHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 44455555555554 3344455666666666666666666666666666666666666666555 223
Q ss_pred CChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcc
Q psy6362 78 PGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIF 149 (157)
Q Consensus 78 ~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 149 (157)
.+.||+|+|+..++.+++ ++|++.|+ +++.++..|.||||+|+..++.++++.|+++|++++
T Consensus 100 ~g~t~L~~A~~~~~~~~v---------~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 161 (261)
T 2xai_A 100 DLASPIHEAARRGHVECV---------NSLIAYGG-NIDHKISHLGTPLYLACENQQRACVKKLLESGADVN 161 (261)
T ss_dssp TTCCHHHHHHHTTCHHHH---------HHHHHTTC-CTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred CCCCHHHHHHHcCcHHHH---------HHHHHcCC-CCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 344455555544444444 44444444 444444444444444444444444444444444433
No 35
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.88 E-value=1.6e-21 Score=143.11 Aligned_cols=121 Identities=24% Similarity=0.215 Sum_probs=101.4
Q ss_pred HhhhhhhhHHHHHhcCC----CcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CC-CCChhHHHHHHhcCCccee
Q psy6362 26 VILITVDDVILLRNRAT----NLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VC-SPGLHDWFWTLGIEHVCNV 95 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~----~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~-~~~~t~l~~a~~~~~~~~v 95 (157)
+.....++++.|++.+. +++.++..|.||||+|+..++.+++++|++.+ .+ ..|.||+|+|+..++.+++
T Consensus 87 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v 166 (241)
T 1k1a_A 87 CEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMV 166 (241)
T ss_dssp HHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHH
T ss_pred HHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHH
Confidence 33455677788888876 77888888888888888888888888888877 33 5688999999998888888
Q ss_pred hhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 96 LVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 96 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
++|++.|+ +++.++..|.||||+|+..++.+++++|+++|++++.+|..|+
T Consensus 167 ---------~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 217 (241)
T 1k1a_A 167 ---------QLLLQHGA-NVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHND 217 (241)
T ss_dssp ---------HHHHHTTC-CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred ---------HHHHHcCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCC
Confidence 88888888 8888898999999999999999999999999999998888775
No 36
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.87 E-value=2.8e-22 Score=151.66 Aligned_cols=116 Identities=21% Similarity=0.171 Sum_probs=103.2
Q ss_pred hhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhccchhH
Q psy6362 31 VDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILITDDDV 105 (157)
Q Consensus 31 ~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~ 105 (157)
..++..|++.|+++|.+|..|+||||+|+..|+.+++++|++.+ .+..|.||+|+|+..++.+++ +
T Consensus 66 ~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~---------~ 136 (269)
T 4b93_B 66 QKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV---------K 136 (269)
T ss_dssp ---------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHH---------H
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHH---------H
Confidence 35677899999999999999999999999999999999999988 677899999999999999999 9
Q ss_pred HhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 106 ILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 106 ~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
+|++.|+ +++.+|..|.||||+|+..|+.+++++|+++|++++.++..|+
T Consensus 137 ~Ll~~g~-~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~ 186 (269)
T 4b93_B 137 CLLDSNA-KPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGN 186 (269)
T ss_dssp HHHHTTC-CSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSC
T ss_pred HHHHCCC-CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCC
Confidence 9999999 9999999999999999999999999999999999999998875
No 37
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.87 E-value=1.6e-21 Score=142.80 Aligned_cols=135 Identities=16% Similarity=0.144 Sum_probs=118.1
Q ss_pred CccCCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCc-----ccccCCCCcHHHHHHHhCCHHHHHHHHHcC--
Q psy6362 2 NVVGSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNL-----NARMHDGTTPLILAARLAIEGMVEDLINDF-- 74 (157)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i-----~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-- 74 (157)
|..+..|.++++++ +.....++++.|++.|+++ +.+|..|.||||+|+..++.+++++|++.|
T Consensus 31 ~~~~~~g~t~L~~A----------~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 100 (232)
T 2rfa_A 31 HQRGAMGETALHIA----------ALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGAS 100 (232)
T ss_dssp TCCCTTSCCHHHHH----------HHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred ccCCCCCCCHHHHH----------HHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCC
Confidence 45566666666665 5566789999999999998 677889999999999999999999999998
Q ss_pred ---CC-------------CCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHH
Q psy6362 75 ---VC-------------SPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMV 138 (157)
Q Consensus 75 ---~~-------------~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~ 138 (157)
.+ ..|.||||+|+..++.+++ ++|++.|+ +++.+|..|.||||+|+..++.+++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v---------~~Ll~~ga-~~~~~d~~g~t~L~~A~~~~~~~~~ 170 (232)
T 2rfa_A 101 VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIV---------RLLIEHGA-DIRAQDSLGNTVLHILILQPNKTFA 170 (232)
T ss_dssp TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHH---------HHHHHTTC-CTTCCCTTSCCHHHHHHTCSCHHHH
T ss_pred CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHH---------HHHHHCCC-CCCCCCCCCCCHHHHHHHcCChHHH
Confidence 22 2699999999999999999 99999999 9999999999999999999999887
Q ss_pred ----HHHHHcCCCc------ceeccCCC
Q psy6362 139 ----EDLINFFVHI------FFKENINK 156 (157)
Q Consensus 139 ----~~Ll~~ga~~------~~~~~~g~ 156 (157)
++|+++|+++ +.+|..|+
T Consensus 171 ~~i~~~Ll~~g~~~~~~~~~~~~~~~g~ 198 (232)
T 2rfa_A 171 CQMYNLLLSYDGGDHLKSLELVPNNQGL 198 (232)
T ss_dssp HHHHHHHHHTTCSCSSCCGGGCCCTTSC
T ss_pred HHHHHHHHhcCCchhhhhhhccCCCCCC
Confidence 9999999988 57777765
No 38
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.87 E-value=1.8e-21 Score=154.88 Aligned_cols=122 Identities=22% Similarity=0.134 Sum_probs=114.2
Q ss_pred hHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhh
Q psy6362 25 LVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVIL 99 (157)
Q Consensus 25 ~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~ 99 (157)
++.....+++++|+++|++++.++..|.||||+|+..++.+++++|++.+ .+..|.||||+|+..++.+++
T Consensus 252 A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v---- 327 (437)
T 1n11_A 252 AAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLV---- 327 (437)
T ss_dssp HHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHH----
T ss_pred HHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHH----
Confidence 34556788999999999999999999999999999999999999999988 677899999999999999999
Q ss_pred ccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 100 ITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 100 ~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
++|++.|+ +++.++..|.||||+|+..|+.+++++|+++|++++.++..|+
T Consensus 328 -----~~Ll~~ga-d~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~ 378 (437)
T 1n11_A 328 -----KFLLQHQA-DVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGT 378 (437)
T ss_dssp -----HHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSC
T ss_pred -----HHHHhcCC-CCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCC
Confidence 99999999 9999999999999999999999999999999999999998885
No 39
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.87 E-value=2.2e-21 Score=136.37 Aligned_cols=110 Identities=26% Similarity=0.230 Sum_probs=103.8
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhc
Q psy6362 26 VILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILI 100 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~ 100 (157)
+.....++++.|++.|++++.++..|.||||+|+..++.+++++|++.+ .+..|.||||+|+..++.+++
T Consensus 55 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v----- 129 (169)
T 2y1l_E 55 AFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIV----- 129 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH-----
T ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH-----
Confidence 5566789999999999999999999999999999999999999999988 677899999999999999999
Q ss_pred cchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcC
Q psy6362 101 TDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFF 145 (157)
Q Consensus 101 ~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~g 145 (157)
++|++.|+ +++.++..|.||+++|+..++.+++++|++.|
T Consensus 130 ----~~Ll~~g~-~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 130 ----EVLLKNGA-DVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp ----HHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred ----HHHHHcCC-CCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 99999999 99999999999999999999999999999876
No 40
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.87 E-value=2.8e-21 Score=141.85 Aligned_cols=121 Identities=22% Similarity=0.167 Sum_probs=109.5
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC---------CCCCChhHHHHHHhcCCcceeh
Q psy6362 26 VILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF---------VCSPGLHDWFWTLGIEHVCNVL 96 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~---------~~~~~~t~l~~a~~~~~~~~v~ 96 (157)
+.....++++.|++.|++++.++..|.||||+|+..++.+++++|++.+ .+..|.||+|+|+..++.+++
T Consensus 54 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~- 132 (241)
T 1k1a_A 54 VITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETV- 132 (241)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHH-
T ss_pred HHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHH-
Confidence 4456678999999999999999999999999999999999999999875 466789999999999999999
Q ss_pred hhhccchhHHhhhcCCCCCccCC-CCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 97 VILITDDDVILLRNRATNLNARM-HDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 97 ~~~~~~~~~~ll~~~~~~~~~~~-~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
++|++.++ +++..+ ..|.||||+|+..++.++++.|+++|++++.++..|+
T Consensus 133 --------~~Ll~~g~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 184 (241)
T 1k1a_A 133 --------QLLLERGA-DIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGS 184 (241)
T ss_dssp --------HHHHHTTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSC
T ss_pred --------HHHHHcCC-CcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 99999999 988888 7899999999999999999999999999999988775
No 41
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.87 E-value=2e-21 Score=145.43 Aligned_cols=133 Identities=23% Similarity=0.127 Sum_probs=118.6
Q ss_pred CccCCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CC
Q psy6362 2 NVVGSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VC 76 (157)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~ 76 (157)
|..+..|.++++++ +.....+++++|++.|++++.. ..|.||||+|+..++.+++++|++.| .+
T Consensus 63 ~~~~~~g~t~L~~A----------~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 131 (261)
T 2xai_A 63 NGVTADWHTPLFNA----------CVSGSWDCVNLLLQHGASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGNIDHKI 131 (261)
T ss_dssp TCCCTTSCCHHHHH----------HHHTCHHHHHHHHHTTCCSSCS-CTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB
T ss_pred CCCCCCCCCHHHHH----------HHcCCHHHHHHHHHCCCCCCCC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCC
Confidence 45566666666665 5667789999999999999864 46999999999999999999999998 67
Q ss_pred CCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 77 SPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 77 ~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
..|.||||+|+..++.+++ ++|++.|+ +++. +..|.||||+|+..++.+++++|+++|++++.+|..|+
T Consensus 132 ~~g~t~L~~A~~~~~~~~v---------~~Ll~~g~-~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~ 200 (261)
T 2xai_A 132 SHLGTPLYLACENQQRACV---------KKLLESGA-DVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGK 200 (261)
T ss_dssp TTTBCHHHHHHHTTCHHHH---------HHHHHHTC-CTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCCCCHHHHHHHhCCHHHH---------HHHHHcCC-CCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 7899999999999999999 99999999 9885 78899999999999999999999999999999999886
No 42
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.87 E-value=1e-21 Score=137.44 Aligned_cols=128 Identities=16% Similarity=0.185 Sum_probs=115.4
Q ss_pred CccCCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CC
Q psy6362 2 NVVGSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VC 76 (157)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~ 76 (157)
|..+..|.++++++ +.....++++.|++.|++++.++..|.||||+|+..++.+++++|++.+ .+
T Consensus 30 ~~~~~~g~t~L~~A----------~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 99 (167)
T 3v31_A 30 NHTDEEGFTPLMWA----------AAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYD 99 (167)
T ss_dssp TCCCTTSCCHHHHH----------HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCC
T ss_pred CCCCCCCCCHHHHH----------HHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCC
Confidence 44556666666665 5566789999999999999999999999999999999999999999988 67
Q ss_pred CCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcc
Q psy6362 77 SPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIF 149 (157)
Q Consensus 77 ~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 149 (157)
..|.||+|+|+..++.+++ ++|++.|+ +++.++..|.||+++|+..++.+++++|+++++++.
T Consensus 100 ~~g~t~L~~A~~~~~~~~v---------~~Ll~~g~-~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 100 WNGGTPLLYAVHGNHVKCV---------KMLLESGA-DPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp TTSCCHHHHHHHTTCHHHH---------HHHHHTTC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHcCCHHHH---------HHHHHcCC-CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 7899999999999999999 99999999 999999999999999999999999999999887654
No 43
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.87 E-value=1.3e-22 Score=150.03 Aligned_cols=120 Identities=16% Similarity=0.044 Sum_probs=112.5
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhc
Q psy6362 26 VILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILI 100 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~ 100 (157)
+.....++++.|++.|++++.+|..|+||||+|+..|+.+++++|++.| ++..|.||||+|+..++.+++
T Consensus 29 ~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v----- 103 (229)
T 2vge_A 29 ALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVIC----- 103 (229)
T ss_dssp HHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH-----
T ss_pred HHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHH-----
Confidence 6677889999999999999999999999999999999999999999998 677899999999999999999
Q ss_pred cchhHHhhhcCCCCCccCC-CCCCcHHHHH--HHhCCHHHHHHHHHcCCCcceeccCC
Q psy6362 101 TDDDVILLRNRATNLNARM-HDGTTPLILA--ARLAIEGMVEDLINFFVHIFFKENIN 155 (157)
Q Consensus 101 ~~~~~~ll~~~~~~~~~~~-~~g~tpl~~A--~~~~~~~~~~~Ll~~ga~~~~~~~~g 155 (157)
++|++.|+ +++..+ ..|.||||+| +..++.+++++|+++|++++.++..|
T Consensus 104 ----~~Ll~~ga-~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~ 156 (229)
T 2vge_A 104 ----MALVQHGA-AIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGA 156 (229)
T ss_dssp ----HHHHTTTC-CTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGE
T ss_pred ----HHHHHcCC-CcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCc
Confidence 99999999 999886 6999999999 99999999999999999999887654
No 44
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.87 E-value=2.2e-21 Score=138.79 Aligned_cols=124 Identities=18% Similarity=0.116 Sum_probs=112.3
Q ss_pred CccCCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CC
Q psy6362 2 NVVGSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VC 76 (157)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~ 76 (157)
|..+..|.++++++ +.....++++.|++.|++++.++..|.||||+|+..++.+++++|++.+ .+
T Consensus 62 ~~~~~~g~t~L~~A----------~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 131 (192)
T 2rfm_A 62 EDKDIEGSTALIWA----------VKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRN 131 (192)
T ss_dssp TCCCTTSCCHHHHH----------HHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCC
T ss_pred ccccccCccHHHHH----------HHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 44455566666654 5667789999999999999999999999999999999999999999988 67
Q ss_pred CCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcC
Q psy6362 77 SPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFF 145 (157)
Q Consensus 77 ~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~g 145 (157)
..|.||+|+|+..++.+++ ++|++.|+ +++.++..|.||+++|+..++.+++++|+++|
T Consensus 132 ~~g~t~L~~A~~~~~~~~v---------~~Ll~~ga-~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 132 LEGETPLIVASKYGRSEIV---------KKLLELGA-DISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp TTCCCHHHHHHHHTCHHHH---------HHHHHTTC-CTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHH---------HHHHHCCC-CCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 8899999999999999999 99999999 99999999999999999999999999999875
No 45
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.86 E-value=4.3e-22 Score=154.10 Aligned_cols=136 Identities=21% Similarity=0.190 Sum_probs=113.1
Q ss_pred Cc-cCCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCC---HHHHHHHHHcC---
Q psy6362 2 NV-VGSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAI---EGMVEDLINDF--- 74 (157)
Q Consensus 2 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~---~~~~~~Ll~~~--- 74 (157)
|. .+..|.++++|+ +.....+++++|+++|++++.+|..|+||||+|+..|+ .++++.|++.+
T Consensus 124 n~~~d~~g~TpLh~A----------a~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~ 193 (327)
T 1sw6_A 124 NIPVDEHGNTPLHWL----------TSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPC 193 (327)
T ss_dssp CSCCSTTCCCHHHHH----------HHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGG
T ss_pred ccccCCCCCcHHHHH----------HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcc
Confidence 55 677888888876 55667899999999999999999999999999999988 45555555543
Q ss_pred ---CCCCChhHHHHHHh----cCCcceehhhhccchhHHhhhcC--------------------C---------------
Q psy6362 75 ---VCSPGLHDWFWTLG----IEHVCNVLVILITDDDVILLRNR--------------------A--------------- 112 (157)
Q Consensus 75 ---~~~~~~t~l~~a~~----~~~~~~v~~~~~~~~~~~ll~~~--------------------~--------------- 112 (157)
.+..|.||||+|+. .++.+++ +++++.+ +
T Consensus 194 ~~~~d~~g~tpLh~A~~~~~~~g~~~~v---------~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~ 264 (327)
T 1sw6_A 194 LILEDSMNRTILHHIIITSGMTGCSAAA---------KYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILE 264 (327)
T ss_dssp GGEECTTCCCHHHHHHHHHTSTTCHHHH---------HHHHHHHHHHHHHGGGCCEEEC----------------CHHHH
T ss_pred ccCCCCCCCCHHHHHHHHccccccHHHH---------HHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHH
Confidence 78889999999998 7888888 6555442 1
Q ss_pred ---------CCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 113 ---------TNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 113 ---------~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
.+++.++..|+||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus 265 a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~ 317 (327)
T 1sw6_A 265 NLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGL 317 (327)
T ss_dssp HCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred HHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC
Confidence 02677889999999999999999999999999999999999886
No 46
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.86 E-value=4.5e-21 Score=140.74 Aligned_cols=121 Identities=20% Similarity=0.168 Sum_probs=88.1
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC------CCCCChhHHHHHHhcCCcceehhhh
Q psy6362 26 VILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF------VCSPGLHDWFWTLGIEHVCNVLVIL 99 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~------~~~~~~t~l~~a~~~~~~~~v~~~~ 99 (157)
+.....++++.|++.|++++.++..|.||||+|+..++.+++++|++.+ .+..|.||+|+|+..++.+++
T Consensus 52 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~---- 127 (237)
T 3b7b_A 52 AENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLV---- 127 (237)
T ss_dssp HHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHH----
T ss_pred HHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHH----
Confidence 3345566777777777777777777777777777777777777777665 445677777777777777777
Q ss_pred ccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 100 ITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 100 ~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
++|++.|+ +++.++..|.||||+|+..++.+++++|+++|++++.++..|+
T Consensus 128 -----~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 178 (237)
T 3b7b_A 128 -----KLLLSKGS-DINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGD 178 (237)
T ss_dssp -----HHHHHTTC-CTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCC
T ss_pred -----HHHHHCCC-CCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 77777777 7777777777777777777777777777777777777776654
No 47
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.86 E-value=4.8e-21 Score=147.18 Aligned_cols=70 Identities=16% Similarity=-0.038 Sum_probs=41.8
Q ss_pred CCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 77 SPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 77 ~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
..|.||||+|+..++.+++ ++|++.|+ +++.+|..|.||||+|+..++.+++++|+++|++++.+|..|+
T Consensus 245 ~~g~t~L~~A~~~g~~~~v---------~~Ll~~ga-~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~ 314 (351)
T 3utm_A 245 KDFMTPLHVAAERAHNDVM---------EVLHKHGA-KMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGF 314 (351)
T ss_dssp TTCCCHHHHHHHTTCHHHH---------HHHHHTTC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCCCCHHHHHHHcCCHHHH---------HHHHHCCC-CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCC
Confidence 3455555555555555555 56666665 6666666666666666666666666666666666666655553
No 48
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.86 E-value=8.9e-22 Score=146.48 Aligned_cols=133 Identities=17% Similarity=0.051 Sum_probs=115.8
Q ss_pred cCCCCchhhhhhhcccchhhHhHhh---hhhhhHHHHHhcCCCcccc-----------cCCCCcHHHHHHHhCCHHHHHH
Q psy6362 4 VGSPGLHDWFWTLGIEHVCNVLVIL---ITVDDVILLRNRATNLNAR-----------MHDGTTPLILAARLAIEGMVED 69 (157)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Ll~~g~~i~~~-----------~~~g~t~Lh~a~~~~~~~~~~~ 69 (157)
.+..|.++++++ +.. ...+++++|++.|++++.. |..|.||||+|+..|+.+++++
T Consensus 39 ~d~~g~t~L~~A----------~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~ 108 (256)
T 2etb_A 39 EGSTGKTCLMKA----------VLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKL 108 (256)
T ss_dssp BTTTTBCHHHHH----------HHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHH
T ss_pred CCCCCCCHHHHH----------HHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHH
Confidence 456666666665 444 6779999999999888743 3689999999999999999999
Q ss_pred HHHcC-----CCCC-------------ChhHHHHHHhcCCcceehhhhccchhHHhhh---cCCCCCccCCCCCCcHHHH
Q psy6362 70 LINDF-----VCSP-------------GLHDWFWTLGIEHVCNVLVILITDDDVILLR---NRATNLNARMHDGTTPLIL 128 (157)
Q Consensus 70 Ll~~~-----~~~~-------------~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~---~~~~~~~~~~~~g~tpl~~ 128 (157)
|++.| .+.. |.||||+|+..++.+++ ++|++ .|+ +++.+|..|.||||+
T Consensus 109 Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v---------~~Ll~~~~~ga-~~n~~d~~g~TpLh~ 178 (256)
T 2etb_A 109 LVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVV---------TYLLENPHQPA-SLEATDSLGNTVLHA 178 (256)
T ss_dssp HHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHH---------HHHHHCSSCCC-CTTCCCTTSCCHHHH
T ss_pred HHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHH---------HHHHhccccCC-CcCccCCCCCCHHHH
Confidence 99998 3433 99999999999999999 99999 899 999999999999999
Q ss_pred HHH--hCCHH-------HHHHHHHcCCCc-------ceeccCCC
Q psy6362 129 AAR--LAIEG-------MVEDLINFFVHI-------FFKENINK 156 (157)
Q Consensus 129 A~~--~~~~~-------~~~~Ll~~ga~~-------~~~~~~g~ 156 (157)
|+. .++.+ ++++|+++|+++ +.+|..|+
T Consensus 179 A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~ 222 (256)
T 2etb_A 179 LVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGL 222 (256)
T ss_dssp HHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSC
T ss_pred HHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCC
Confidence 998 77888 999999999999 88888875
No 49
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.86 E-value=6.8e-21 Score=138.85 Aligned_cols=133 Identities=17% Similarity=0.205 Sum_probs=117.1
Q ss_pred cCCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcC--CCccc-ccCCCCcHHHHHHHhCCHHHHHHHHHcC------
Q psy6362 4 VGSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRA--TNLNA-RMHDGTTPLILAARLAIEGMVEDLINDF------ 74 (157)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g--~~i~~-~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~------ 74 (157)
.+..|.++++++ +.....++++.|++.| .+++. ++..|.||||+|+..++.+++++|++.+
T Consensus 32 ~~~~g~t~L~~A----------~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 101 (228)
T 2dzn_A 32 KDQDGRIPLHWS----------VSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLN 101 (228)
T ss_dssp CCTTSCCHHHHH----------HHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTT
T ss_pred CCCCCCCHHHHH----------HHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccc
Confidence 345555555554 5566789999999999 66666 7789999999999999999999999975
Q ss_pred -CCCCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcC-CCcceec
Q psy6362 75 -VCSPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFF-VHIFFKE 152 (157)
Q Consensus 75 -~~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~g-a~~~~~~ 152 (157)
.+..|.||+|+|+..++.+++ ++|++.|+ +++.++..|.||||+|+..++.+++++|++.| ++++.++
T Consensus 102 ~~~~~g~t~L~~A~~~~~~~~~---------~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d 171 (228)
T 2dzn_A 102 KITNQGVTCLHLAVGKKWFEVS---------QFLIENGA-SVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQD 171 (228)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHH---------HHHHHTTC-CSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCC
T ss_pred cCCcCCCCHHHHHHHcCCHhHH---------HHHHHcCC-CccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcC
Confidence 567799999999999999999 99999999 99999999999999999999999999999999 9999998
Q ss_pred cCCC
Q psy6362 153 NINK 156 (157)
Q Consensus 153 ~~g~ 156 (157)
..|+
T Consensus 172 ~~g~ 175 (228)
T 2dzn_A 172 KQGW 175 (228)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 8875
No 50
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=2.1e-21 Score=132.02 Aligned_cols=105 Identities=20% Similarity=0.098 Sum_probs=88.1
Q ss_pred CCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCC
Q psy6362 41 ATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNL 115 (157)
Q Consensus 41 g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~ 115 (157)
|+|+ .+|..|+||||+|+..|+.+++++|++.+ .+..|.||||+|+..++.+++ ++|++.++ ++
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~---------~~Ll~~g~-~~ 69 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVV---------ELLLQHKA-LV 69 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHH---------HHHHHTTC-CT
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHH---------HHHHHcCC-cc
Confidence 5667 67888889999998888888888888887 567788899998888888888 88888888 88
Q ss_pred ccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 116 NARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 116 ~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
+.++..|.||||+|+..++.+++++|+++|++++.+|..|+
T Consensus 70 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 110 (137)
T 3c5r_A 70 NTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGL 110 (137)
T ss_dssp TCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Confidence 88888888899999888888899988888888888888775
No 51
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.86 E-value=4.6e-21 Score=145.52 Aligned_cols=111 Identities=21% Similarity=0.093 Sum_probs=56.5
Q ss_pred hhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC----CCCCChhHHHHHHhcCCcceehhhhccchh
Q psy6362 29 ITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF----VCSPGLHDWFWTLGIEHVCNVLVILITDDD 104 (157)
Q Consensus 29 ~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~----~~~~~~t~l~~a~~~~~~~~v~~~~~~~~~ 104 (157)
...+++++|++.|++++.++..|.||||+|+..++.+++++|++.+ .+..|.||||+|+..++.+++
T Consensus 103 g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v--------- 173 (285)
T 3d9h_A 103 GHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECV--------- 173 (285)
T ss_dssp TCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHH---------
T ss_pred CcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHH---------
Confidence 3445555555556666555555555555555555555555555554 223344555555544444444
Q ss_pred HHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcc
Q psy6362 105 VILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIF 149 (157)
Q Consensus 105 ~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 149 (157)
++|++.++ +++.++..|.||||+|+..++.+++++|++.|++++
T Consensus 174 ~~Ll~~g~-~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 217 (285)
T 3d9h_A 174 NSLIAYGG-NIDHKISHLGTPLYLACENQQRACVKKLLESGADVN 217 (285)
T ss_dssp HHHHHTTC-CTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHCCC-CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC
Confidence 44444444 444444444444444444444444444444444444
No 52
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.86 E-value=8.7e-21 Score=145.73 Aligned_cols=143 Identities=20% Similarity=0.118 Sum_probs=104.7
Q ss_pred ccCCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCC
Q psy6362 3 VVGSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCS 77 (157)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~ 77 (157)
..+..|.++++++ +.....++++.|++.|++++.++..|.||||+|+..|+.+++++|++.| .+.
T Consensus 53 ~~d~~g~t~L~~A----------~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~ 122 (351)
T 3utm_A 53 ASDGRKSTPLHLA----------AGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDL 122 (351)
T ss_dssp CSSTTCCCHHHHH----------HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred cCCCCCCCHHHHH----------HHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCC
Confidence 3445555555554 4455667777777777777777777777777777777777777777766 455
Q ss_pred CChhHHHHHHhcCCcceehhhhccc-------------------------------------------------------
Q psy6362 78 PGLHDWFWTLGIEHVCNVLVILITD------------------------------------------------------- 102 (157)
Q Consensus 78 ~~~t~l~~a~~~~~~~~v~~~~~~~------------------------------------------------------- 102 (157)
.|.||||+|+..++.+++.++|...
T Consensus 123 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 202 (351)
T 3utm_A 123 WQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEI 202 (351)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhc
Confidence 5667777777776666664444310
Q ss_pred --------------------------hhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 103 --------------------------DDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 103 --------------------------~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
--++|++.++ +++.++..|.||||+|+..++.+++++|+++|++++.++..|+
T Consensus 203 ~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~ 281 (351)
T 3utm_A 203 INFKQPQSHETALHCAVASLHPKRKQVAELLLRKGA-NVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQ 281 (351)
T ss_dssp TTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred ccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCC-CcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC
Confidence 0046677788 8888899999999999999999999999999999999998875
No 53
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.86 E-value=1.7e-21 Score=136.01 Aligned_cols=110 Identities=18% Similarity=0.084 Sum_probs=102.2
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhc
Q psy6362 26 VILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILI 100 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~ 100 (157)
+.....+++++|++.|++++.++..|+||||+|+..++.+++++|++.+ .+..|.||+|+|+..++.+++
T Consensus 50 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v----- 124 (165)
T 3twr_A 50 AGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEIC----- 124 (165)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH-----
T ss_pred HHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHH-----
Confidence 5667789999999999999999999999999999999999999999998 677899999999999999999
Q ss_pred cchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCC
Q psy6362 101 TDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFV 146 (157)
Q Consensus 101 ~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga 146 (157)
++|++.|+ +++.++..|.||+++|.. ++.+++++|+++|+
T Consensus 125 ----~~Ll~~ga-~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 125 ----KLLLQHGA-DPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp ----HHHHHTTC-CTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred ----HHHHHcCC-CCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 99999999 999999999999999877 89999999999886
No 54
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.86 E-value=8.3e-21 Score=144.10 Aligned_cols=119 Identities=23% Similarity=0.133 Sum_probs=109.8
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhc
Q psy6362 26 VILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILI 100 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~ 100 (157)
+.....+++++|++.|++++..+ .|.||||+|+..|+.+++++|++.+ .+..|.||||+|+..++.+++
T Consensus 133 ~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v----- 206 (285)
T 3d9h_A 133 CVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACV----- 206 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHH-----
T ss_pred HHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHH-----
Confidence 45567889999999999998655 5999999999999999999999988 677899999999999999999
Q ss_pred cchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 101 TDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 101 ~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
++|++.++ +++. +..|.||||+|+..++.+++++|+++|++++.+|..|+
T Consensus 207 ----~~Ll~~ga-~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~ 256 (285)
T 3d9h_A 207 ----KKLLESGA-DVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGK 256 (285)
T ss_dssp ----HHHHHTTC-CTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred ----HHHHHCCC-CCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC
Confidence 99999999 8884 88899999999999999999999999999999999886
No 55
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.85 E-value=7.4e-21 Score=131.54 Aligned_cols=116 Identities=16% Similarity=0.125 Sum_probs=57.2
Q ss_pred hhhhhhHHHHHhc-CCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhcc
Q psy6362 28 LITVDDVILLRNR-ATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILIT 101 (157)
Q Consensus 28 ~~~~~~~~~Ll~~-g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~~ 101 (157)
....++++.|++. +.+++.++..|.||||+ +..|+.+++++|++.| .+..|.||||+|+..++.+++
T Consensus 12 ~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v------ 84 (156)
T 1bd8_A 12 RGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTL------ 84 (156)
T ss_dssp HTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH------
T ss_pred hCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHH------
Confidence 3344444444444 22445555555555555 4445555555555544 334445555555555555555
Q ss_pred chhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCC
Q psy6362 102 DDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENIN 155 (157)
Q Consensus 102 ~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g 155 (157)
++|++.|+ +++.++..|.||||+|+..++.+++++|++. ++++.++..|
T Consensus 85 ---~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g 133 (156)
T 1bd8_A 85 ---KVLVEHGA-DVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARG 133 (156)
T ss_dssp ---HHHHHTTC-CSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTS
T ss_pred ---HHHHHcCC-CCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCC
Confidence 55555554 5555555555555555555555555555544 4554444444
No 56
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.85 E-value=1.8e-21 Score=147.80 Aligned_cols=118 Identities=19% Similarity=0.100 Sum_probs=99.4
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCCC-CcHHHHHHHhCCHHHHHHHHHcC---CCC-CChhHHHHHHhcCCcceehhhhc
Q psy6362 26 VILITVDDVILLRNRATNLNARMHDG-TTPLILAARLAIEGMVEDLINDF---VCS-PGLHDWFWTLGIEHVCNVLVILI 100 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~g-~t~Lh~a~~~~~~~~~~~Ll~~~---~~~-~~~t~l~~a~~~~~~~~v~~~~~ 100 (157)
+.....+++++|+++|++++.++..| .||||+|+..++.+++++|++.+ .+. .|.||||+|+..++.+++
T Consensus 103 ~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v----- 177 (285)
T 3kea_A 103 VDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMM----- 177 (285)
T ss_dssp HHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHH-----
T ss_pred HHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHH-----
Confidence 44566788888888888888888888 78888888888888888888887 233 778899999988888888
Q ss_pred cchhHHhhhcCCCCCccCCCCCCcH-HHHHHHhCCHHHHHHHHHcCCCcceecc
Q psy6362 101 TDDDVILLRNRATNLNARMHDGTTP-LILAARLAIEGMVEDLINFFVHIFFKEN 153 (157)
Q Consensus 101 ~~~~~~ll~~~~~~~~~~~~~g~tp-l~~A~~~~~~~~~~~Ll~~ga~~~~~~~ 153 (157)
++|++.|+ +++.++..|.|| ||+|+..++.+++++|+++|++++.++.
T Consensus 178 ----~~Ll~~ga-d~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~ 226 (285)
T 3kea_A 178 ----ILLLDYMT-STNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL 226 (285)
T ss_dssp ----HHHHHHHH-HTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG
T ss_pred ----HHHHHcCC-CCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh
Confidence 88888888 888888889887 9999999999999999999999888764
No 57
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.85 E-value=1.9e-20 Score=136.79 Aligned_cols=135 Identities=16% Similarity=0.057 Sum_probs=119.8
Q ss_pred CccCCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC------C
Q psy6362 2 NVVGSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF------V 75 (157)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~------~ 75 (157)
+-.++.|.++++++ +.....++++.|++.|++++.++..|.||||+|+..|+.+++++|++.+ .
T Consensus 3 ~~~d~~~~~~l~~A----------~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~ 72 (240)
T 3eu9_A 3 THIDDYSTWDIVKA----------TQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLG 72 (240)
T ss_dssp CCCSCGGGCCHHHH----------HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB
T ss_pred cccccccchHHHHH----------HHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhc
Confidence 44556666666665 6667789999999999999999999999999999999999999999988 3
Q ss_pred CCCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCC
Q psy6362 76 CSPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENIN 155 (157)
Q Consensus 76 ~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g 155 (157)
+..+.||+|+|+..++.+++ ++|++.++ +++..+..|.||||.|+..++.++++.|+++|++++.++..|
T Consensus 73 ~~~~~t~L~~A~~~~~~~~v---------~~Ll~~g~-~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g 142 (240)
T 3eu9_A 73 GDLNSTPLHWATRQGHLSMV---------VQLMKYGA-DPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNG 142 (240)
T ss_dssp TTTTBCHHHHHHHHTCHHHH---------HHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCcCCChhHHHHHcCCHHHH---------HHHHHcCC-CCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCC
Confidence 34488999999999999999 99999999 999999999999999999999999999999999999988776
Q ss_pred C
Q psy6362 156 K 156 (157)
Q Consensus 156 ~ 156 (157)
+
T Consensus 143 ~ 143 (240)
T 3eu9_A 143 M 143 (240)
T ss_dssp C
T ss_pred C
Confidence 4
No 58
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.85 E-value=3.6e-21 Score=144.56 Aligned_cols=120 Identities=21% Similarity=0.137 Sum_probs=102.8
Q ss_pred HhhhhhhhHHHHHhcCCCcccccC--------------CCCcHHHHHHHhCCHHHHHHHHH---cC-----CCCCChhHH
Q psy6362 26 VILITVDDVILLRNRATNLNARMH--------------DGTTPLILAARLAIEGMVEDLIN---DF-----VCSPGLHDW 83 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~--------------~g~t~Lh~a~~~~~~~~~~~Ll~---~~-----~~~~~~t~l 83 (157)
+.....+++++|++.|++++.++. .|.||||+|+..|+.+++++|++ .| ++..|.|||
T Consensus 109 ~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpL 188 (273)
T 2pnn_A 109 IERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVL 188 (273)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHH
T ss_pred HHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHH
Confidence 556778999999999999999997 79999999999999999999999 77 778899999
Q ss_pred HHHHhcCC---------cceehhhhccchhHHhhhcCCCCCc-------cCCCCCCcHHHHHHHhCCHHHHHHHHHcCC-
Q psy6362 84 FWTLGIEH---------VCNVLVILITDDDVILLRNRATNLN-------ARMHDGTTPLILAARLAIEGMVEDLINFFV- 146 (157)
Q Consensus 84 ~~a~~~~~---------~~~v~~~~~~~~~~~ll~~~~~~~~-------~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga- 146 (157)
|+|+..++ .+++ ++|++.|+ +++ .++..|.||||+|+..|+.+++++|+++|+
T Consensus 189 h~A~~~~~~~~~~~~~~~~~v---------~~Ll~~ga-~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 189 HALVEVADNTVDNTKFVTSMY---------NEILILGA-KLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIH 258 (273)
T ss_dssp HHHHHHCCSCHHHHHHHHHHH---------HHHHHHHH-HHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred HHHHHccCcchhHHHHHHHHH---------HHHHHhhh-hcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCC
Confidence 99999887 6788 89999998 886 489999999999999999999999999999
Q ss_pred CcceeccCC
Q psy6362 147 HIFFKENIN 155 (157)
Q Consensus 147 ~~~~~~~~g 155 (157)
+++.....+
T Consensus 259 dp~~~~~~~ 267 (273)
T 2pnn_A 259 EPECRHAAA 267 (273)
T ss_dssp ---------
T ss_pred Cchhhhhhh
Confidence 777665443
No 59
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.85 E-value=4.9e-21 Score=140.86 Aligned_cols=120 Identities=21% Similarity=0.164 Sum_probs=108.6
Q ss_pred HhhhhhhhHHHHHhcCCC------cccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCC-CChhHHHHHHhcCCcc
Q psy6362 26 VILITVDDVILLRNRATN------LNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCS-PGLHDWFWTLGIEHVC 93 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~------i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~-~~~t~l~~a~~~~~~~ 93 (157)
+.....+++++|++.|.+ ++..+..|.||||+|+..++.+++++|++.| .+. .|.||||+|+..++.+
T Consensus 86 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~ 165 (236)
T 1ikn_D 86 CEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPD 165 (236)
T ss_dssp HHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred HHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 556678899999999876 5778889999999999999999999999998 454 8999999999999999
Q ss_pred eehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcc--eeccCC
Q psy6362 94 NVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIF--FKENIN 155 (157)
Q Consensus 94 ~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~--~~~~~g 155 (157)
++ ++|++.|+ +++.++..|.||+++|+..++.+++++|+++|++.. ..+..|
T Consensus 166 ~v---------~~Ll~~ga-~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~ 219 (236)
T 1ikn_D 166 LV---------SLLLKCGA-DVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESED 219 (236)
T ss_dssp HH---------HHHHTTTC-CSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCT
T ss_pred HH---------HHHHHcCC-CCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccch
Confidence 99 99999999 999999999999999999999999999999999876 555544
No 60
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.85 E-value=3.6e-21 Score=130.91 Aligned_cols=105 Identities=15% Similarity=-0.013 Sum_probs=100.2
Q ss_pred CCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCC
Q psy6362 41 ATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNL 115 (157)
Q Consensus 41 g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~ 115 (157)
+++++.++..|.||||+|+..++.+++++|++.+ ++..|.||||+|+. ++.+++ ++|++.++ ++
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v---------~~Ll~~g~-~~ 70 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVA---------ELLLLHGA-EP 70 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHH---------HHHHHHTC-CS
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHH---------HHHHHCCC-CC
Confidence 6789999999999999999999999999999988 67889999999999 999999 99999999 99
Q ss_pred ccCCCC-CCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 116 NARMHD-GTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 116 ~~~~~~-g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
+.++.. |.||||+|+..++.+++++|+++|++++.++..|+
T Consensus 71 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~ 112 (136)
T 1d9s_A 71 NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGR 112 (136)
T ss_dssp SCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSS
T ss_pred CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCC
Confidence 999999 99999999999999999999999999999998875
No 61
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.85 E-value=1.8e-20 Score=129.55 Aligned_cols=107 Identities=19% Similarity=0.154 Sum_probs=101.2
Q ss_pred hHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhh
Q psy6362 25 LVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVIL 99 (157)
Q Consensus 25 ~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~ 99 (157)
++.....++++.|++.|++++.++..|+||||+|+..++.+++++|++.| .+..|.||+|+|+..++.+++
T Consensus 41 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v---- 116 (153)
T 1awc_B 41 AAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV---- 116 (153)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHH----
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH----
Confidence 36667789999999999999999999999999999999999999999988 677899999999999999999
Q ss_pred ccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHH
Q psy6362 100 ITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDL 141 (157)
Q Consensus 100 ~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~L 141 (157)
++|++.|+ +++.++..|.||+++|+..++.+++++|
T Consensus 117 -----~~Ll~~ga-~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 117 -----ELLIKYGA-DVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp -----HHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred -----HHHHHcCC-CccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999 9999999999999999999999999986
No 62
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.85 E-value=2.8e-21 Score=143.20 Aligned_cols=115 Identities=17% Similarity=0.040 Sum_probs=47.7
Q ss_pred hhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhccch
Q psy6362 29 ITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILITDD 103 (157)
Q Consensus 29 ~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~~~~ 103 (157)
...++++.|+++|++++.. ..|.||||.|+..|+.++++.|++.+ .+..|.||||+|+..++.+++
T Consensus 16 ~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v-------- 86 (239)
T 1ycs_B 16 NLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIV-------- 86 (239)
T ss_dssp ----------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHH--------
T ss_pred hhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHH--------
Confidence 3344444455555555432 34445555555555555555555444 344455555555555555555
Q ss_pred hHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccC
Q psy6362 104 DVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENI 154 (157)
Q Consensus 104 ~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~ 154 (157)
++|++.|+ +++.+|..|.||||+|+..++.+++++|+++|++++.++..
T Consensus 87 -~~Ll~~ga-~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 135 (239)
T 1ycs_B 87 -KFLVQFGV-NVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYS 135 (239)
T ss_dssp -HHHHHHTC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSS
T ss_pred -HHHHHcCC-CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCC
Confidence 55555555 55555555555555555555555555555555555544443
No 63
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.85 E-value=6.8e-21 Score=148.40 Aligned_cols=110 Identities=15% Similarity=0.225 Sum_probs=56.6
Q ss_pred hhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC----------CCCCChhHHHHHHhcCCcceehhhh
Q psy6362 30 TVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF----------VCSPGLHDWFWTLGIEHVCNVLVIL 99 (157)
Q Consensus 30 ~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~----------~~~~~~t~l~~a~~~~~~~~v~~~~ 99 (157)
..+++++|++.|++++.+|..|+||||+|+..|+.+++++|++.+ .+..|.||||+|+..++.+++
T Consensus 152 ~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v---- 227 (364)
T 3ljn_A 152 YLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVA---- 227 (364)
T ss_dssp GHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHH----
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHH----
Confidence 345555555555555555555555555555555555555555443 223455555555555555555
Q ss_pred ccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcc
Q psy6362 100 ITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIF 149 (157)
Q Consensus 100 ~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 149 (157)
++|++.|+ +++.+|..|.|||++|+..|+.+++++|+++|++++
T Consensus 228 -----~~Ll~~ga-d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~ 271 (364)
T 3ljn_A 228 -----MRFVEMGI-DVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFL 271 (364)
T ss_dssp -----HHHHTTTC-CTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHH
T ss_pred -----HHHHHcCC-CCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchh
Confidence 55555555 555555555555555555555555555555555443
No 64
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.85 E-value=1.2e-20 Score=130.50 Aligned_cols=108 Identities=21% Similarity=0.224 Sum_probs=101.4
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhc
Q psy6362 26 VILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILI 100 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~ 100 (157)
+.....++++.|++.|++++.+|..|.||||+|+..|+.+++++|++.| ++..|.||||+|+..++.+++
T Consensus 43 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v----- 117 (156)
T 1bd8_A 43 MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVV----- 117 (156)
T ss_dssp SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHH-----
T ss_pred HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHH-----
Confidence 4456789999999999999999999999999999999999999999988 677899999999999999999
Q ss_pred cchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHc
Q psy6362 101 TDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINF 144 (157)
Q Consensus 101 ~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 144 (157)
++|++. + +++.++..|.||+++|+..++.+++++|+++
T Consensus 118 ----~~Ll~~-~-~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 118 ----SFLAAE-S-DLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp ----HHHHTT-S-CTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred ----HHHHhc-c-CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 999988 8 9999999999999999999999999999874
No 65
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.84 E-value=5.9e-22 Score=144.84 Aligned_cols=124 Identities=13% Similarity=-0.020 Sum_probs=100.4
Q ss_pred hHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHc-C-----CCCCChhHHHHHHhcCCcceeh
Q psy6362 23 NVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLIND-F-----VCSPGLHDWFWTLGIEHVCNVL 96 (157)
Q Consensus 23 ~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~-~-----~~~~~~t~l~~a~~~~~~~~v~ 96 (157)
..++.....++++.|++.|++++.+|..|+||||+|+..|+.+++++|++. + ++..|.||||+|+..++.+++
T Consensus 78 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v- 156 (222)
T 3ehr_A 78 HEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIV- 156 (222)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHH-
T ss_pred ccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHH-
Confidence 344566778999999999999999999999999999999999999999998 5 778899999999999999999
Q ss_pred hhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 97 VILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 97 ~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
++|++.|+ +++.++..|.||+++|+..+..++++.|++.|+..+.+|..|-
T Consensus 157 --------~~Ll~~ga-~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 157 --------QLLLAKGA-RTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp --------HHHHHHTC-CSCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred --------HHHHHcCC-CCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 99999999 9999999999999999999999999999999999998887653
No 66
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.84 E-value=1.8e-20 Score=149.15 Aligned_cols=132 Identities=24% Similarity=0.175 Sum_probs=65.1
Q ss_pred CccCCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CC
Q psy6362 2 NVVGSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VC 76 (157)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~ 76 (157)
|..+..|.+++.++ +....+++++.|+++|++++.++..|.||||+|+..|+.+++++|++.+ .+
T Consensus 8 ~~~~~~g~t~L~~A----------a~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 77 (437)
T 1n11_A 8 GGGGESGLTPLHVA----------SFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKA 77 (437)
T ss_dssp -------CCHHHHH----------HHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCC
T ss_pred cccCCCCCCHHHHH----------HHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Confidence 44555666666665 3444455555555555555555555555555555555555555555544 33
Q ss_pred CCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceecc
Q psy6362 77 SPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKEN 153 (157)
Q Consensus 77 ~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~ 153 (157)
..|.||||+|+..++.+++ ++|++.|+ +++..+..|.||||+|+..|+.++++.|++.|++++..+.
T Consensus 78 ~~g~t~L~~A~~~g~~~~v---------~~Ll~~ga-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 144 (437)
T 1n11_A 78 KDDQTPLHCAARIGHTNMV---------KLLLENNA-NPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTK 144 (437)
T ss_dssp TTSCCHHHHHHHHTCHHHH---------HHHHHHTC-CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT
T ss_pred CCCCCHHHHHHHCCCHHHH---------HHHHhCCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCC
Confidence 4455555555555555555 55555555 5555555555555555555555555444444444444433
No 67
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.84 E-value=3.4e-21 Score=150.08 Aligned_cols=106 Identities=11% Similarity=0.126 Sum_probs=99.4
Q ss_pred CCCcccccCCCCcHHHHHHHhC--CHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCC
Q psy6362 41 ATNLNARMHDGTTPLILAARLA--IEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRAT 113 (157)
Q Consensus 41 g~~i~~~~~~g~t~Lh~a~~~~--~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~ 113 (157)
..+++.++..|.||||+|+..| +.+++++|++.| .+..|.||||+|+..++.+++ ++|++.++
T Consensus 128 ~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v---------~~Ll~~g~- 197 (364)
T 3ljn_A 128 EIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREAL---------DLMMDTVP- 197 (364)
T ss_dssp EETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHH---------HHHHHHCS-
T ss_pred hhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHH---------HHHHhccc-
Confidence 3467788999999999999999 999999999988 677899999999999999999 99999998
Q ss_pred C-----CccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 114 N-----LNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 114 ~-----~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
+ ++..+..|.||||+|+..|+.+++++|+++|++++.++..|+
T Consensus 198 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~ 245 (364)
T 3ljn_A 198 SKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHT 245 (364)
T ss_dssp CSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSC
T ss_pred ccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Confidence 8 999999999999999999999999999999999999998875
No 68
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.84 E-value=2.2e-21 Score=144.54 Aligned_cols=118 Identities=23% Similarity=0.169 Sum_probs=105.6
Q ss_pred hHhhhhhhhHHHHHhcCCCccccc--------------CCCCcHHHHHHHhCCHHHHHHHHH---cC-----CCCCChhH
Q psy6362 25 LVILITVDDVILLRNRATNLNARM--------------HDGTTPLILAARLAIEGMVEDLIN---DF-----VCSPGLHD 82 (157)
Q Consensus 25 ~~~~~~~~~~~~Ll~~g~~i~~~~--------------~~g~t~Lh~a~~~~~~~~~~~Ll~---~~-----~~~~~~t~ 82 (157)
++.....+++++|++.|++++.++ ..|+||||+|+..|+.+++++|++ .| ++..|.||
T Consensus 100 A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~Tp 179 (260)
T 3jxi_A 100 AIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTV 179 (260)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCH
T ss_pred HHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcH
Confidence 366677899999999999999999 689999999999999999999999 77 78889999
Q ss_pred HHHHHhcCC---------cceehhhhccchhHHhhhcCCCCC-------ccCCCCCCcHHHHHHHhCCHHHHHHHHHcCC
Q psy6362 83 WFWTLGIEH---------VCNVLVILITDDDVILLRNRATNL-------NARMHDGTTPLILAARLAIEGMVEDLINFFV 146 (157)
Q Consensus 83 l~~a~~~~~---------~~~v~~~~~~~~~~~ll~~~~~~~-------~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga 146 (157)
||+|+..++ .+++ ++|++.|+ ++ +.++..|.||||+|+..|+.+++++|+++|+
T Consensus 180 Lh~A~~~~~~~~~~~~~~~~~v---------~~Ll~~ga-~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 249 (260)
T 3jxi_A 180 LHALVAIADNTRENTKFVTKMY---------DLLLIKCA-KLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREI 249 (260)
T ss_dssp HHHHHHHCCSSHHHHHHHHHHH---------HHHHHHHH-HHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhccCchhHHHHHHHHH---------HHHHHhCc-ccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 999998776 5788 99999999 88 6799999999999999999999999999998
Q ss_pred Ccceec
Q psy6362 147 HIFFKE 152 (157)
Q Consensus 147 ~~~~~~ 152 (157)
+.....
T Consensus 250 ~~~~~~ 255 (260)
T 3jxi_A 250 ADAAAH 255 (260)
T ss_dssp HHHC--
T ss_pred Cccccc
Confidence 765543
No 69
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.84 E-value=2.9e-20 Score=133.18 Aligned_cols=121 Identities=18% Similarity=0.118 Sum_probs=108.5
Q ss_pred HhhhhhhhHHHHHhcCC-CcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhh
Q psy6362 26 VILITVDDVILLRNRAT-NLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVIL 99 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~-~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~ 99 (157)
+.....+.++.+++.+. +++.++..|.||||+|+..++.+++++|++.| .+..+.||+|+|+..++.+++
T Consensus 13 ~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~---- 88 (201)
T 3hra_A 13 ANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEIL---- 88 (201)
T ss_dssp HHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH----
T ss_pred HHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH----
Confidence 55556677767776665 99999999999999999999999999999988 677899999999999999999
Q ss_pred ccchhHHhh-hcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcC-CCcceeccCCC
Q psy6362 100 ITDDDVILL-RNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFF-VHIFFKENINK 156 (157)
Q Consensus 100 ~~~~~~~ll-~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~g-a~~~~~~~~g~ 156 (157)
++|+ ..++ +++..+..|.||||+|+..++.++++.|+++| ++++.++..|+
T Consensus 89 -----~~Ll~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~ 141 (201)
T 3hra_A 89 -----AYMLKHATP-DLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGY 141 (201)
T ss_dssp -----HHHHHHSCC-CTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSC
T ss_pred -----HHHHhccCc-ccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCC
Confidence 9999 5555 89999999999999999999999999999999 89999988775
No 70
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.84 E-value=3.2e-21 Score=143.47 Aligned_cols=118 Identities=22% Similarity=0.110 Sum_probs=107.1
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCC-------------CCcHHHHHHHhCCHHHHHHHHH---cC-----CCCCChhHHH
Q psy6362 26 VILITVDDVILLRNRATNLNARMHD-------------GTTPLILAARLAIEGMVEDLIN---DF-----VCSPGLHDWF 84 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~-------------g~t~Lh~a~~~~~~~~~~~Ll~---~~-----~~~~~~t~l~ 84 (157)
+.....+++++|++.|++++.++.. |.||||+|+..|+.+++++|++ .| ++..|.||||
T Consensus 98 ~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh 177 (256)
T 2etb_A 98 IEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLH 177 (256)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHH
Confidence 5667789999999999999999986 9999999999999999999999 77 7889999999
Q ss_pred HHHh--cCCcc-------eehhhhccchhHHhhhcCCCCC-------ccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCc
Q psy6362 85 WTLG--IEHVC-------NVLVILITDDDVILLRNRATNL-------NARMHDGTTPLILAARLAIEGMVEDLINFFVHI 148 (157)
Q Consensus 85 ~a~~--~~~~~-------~v~~~~~~~~~~~ll~~~~~~~-------~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 148 (157)
+|+. .++.+ ++ ++|++.|+ ++ +.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus 178 ~A~~~~~~~~~~~~~~~~iv---------~~Ll~~ga-~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 178 ALVMIADNSPENSALVIHMY---------DGLLQMGA-RLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp HHHHHCCSCHHHHHHHHHHH---------HHHHHHHH-HHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHcccCCchhhHHHHHHH---------HHHHHcCC-CcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 9998 67777 88 99999999 98 899999999999999999999999999999876
Q ss_pred ceecc
Q psy6362 149 FFKEN 153 (157)
Q Consensus 149 ~~~~~ 153 (157)
.....
T Consensus 248 ~~~~~ 252 (256)
T 2etb_A 248 AAAHH 252 (256)
T ss_dssp HHHHC
T ss_pred CCccc
Confidence 55443
No 71
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.84 E-value=1.7e-21 Score=144.42 Aligned_cols=118 Identities=14% Similarity=-0.028 Sum_probs=109.6
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhc
Q psy6362 26 VILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILI 100 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~ 100 (157)
+.....++++.|++.|++++.+|..|+||||+|+..|+.+++++|++.| ++..|.||||+|+..++.+++
T Consensus 45 ~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v----- 119 (239)
T 1ycs_B 45 SLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVC----- 119 (239)
T ss_dssp HHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHH-----
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHH-----
Confidence 5567789999999999999999999999999999999999999999988 778899999999999999999
Q ss_pred cchhHHhhhcCCCCCccCCCCCC-cHHHHH--HHhCCHHHHHHHHHcCCCcceecc
Q psy6362 101 TDDDVILLRNRATNLNARMHDGT-TPLILA--ARLAIEGMVEDLINFFVHIFFKEN 153 (157)
Q Consensus 101 ~~~~~~ll~~~~~~~~~~~~~g~-tpl~~A--~~~~~~~~~~~Ll~~ga~~~~~~~ 153 (157)
++|++.|+ +++..+..|. ||+|.| +..|+.+++++|+++|++++..+.
T Consensus 120 ----~~Ll~~ga-~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~ 170 (239)
T 1ycs_B 120 ----KFLVESGA-AVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNK 170 (239)
T ss_dssp ----HHHHHTTC-CTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGG
T ss_pred ----HHHHHcCC-CcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccccccc
Confidence 99999999 9999998777 999999 788999999999999999887654
No 72
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.84 E-value=2.4e-20 Score=141.20 Aligned_cols=124 Identities=19% Similarity=0.083 Sum_probs=111.3
Q ss_pred hHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehh
Q psy6362 23 NVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLV 97 (157)
Q Consensus 23 ~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~ 97 (157)
..++.....++++.|++.|++++.++..|.||||+|+..|+.+++++|++.| .+..|.||||+|+..++.+++
T Consensus 45 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v-- 122 (299)
T 1s70_B 45 LAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIA-- 122 (299)
T ss_dssp HHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH--
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHH--
Confidence 3446667889999999999999999999999999999999999999999998 677899999999999999999
Q ss_pred hhccchhHHhhhcCCCCCccCC----------------------------------------------------------
Q psy6362 98 ILITDDDVILLRNRATNLNARM---------------------------------------------------------- 119 (157)
Q Consensus 98 ~~~~~~~~~ll~~~~~~~~~~~---------------------------------------------------------- 119 (157)
++|++.|+ +++..+
T Consensus 123 -------~~Ll~~g~-~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 194 (299)
T 1s70_B 123 -------EYLISQGA-HVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVR 194 (299)
T ss_dssp -------HHHHHTTC-CTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred -------HHHHhCCC-CCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhh
Confidence 88888888 776554
Q ss_pred --CCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 120 --HDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 120 --~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
..|.||||+|+..|+.++++.|+++|++++.++..|+
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~ 233 (299)
T 1s70_B 195 HAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGW 233 (299)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCC
T ss_pred hcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCC
Confidence 3477889999999999999999999999999998875
No 73
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.84 E-value=5.3e-20 Score=137.40 Aligned_cols=119 Identities=21% Similarity=0.162 Sum_probs=110.9
Q ss_pred hHhhhhhhhHHHHHhc-CCCcccccCCCCcHHHHHHHhCC----HHHHHHHHHcC-----CCCCChhHHHHHHhcCCcce
Q psy6362 25 LVILITVDDVILLRNR-ATNLNARMHDGTTPLILAARLAI----EGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCN 94 (157)
Q Consensus 25 ~~~~~~~~~~~~Ll~~-g~~i~~~~~~g~t~Lh~a~~~~~----~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~ 94 (157)
++.....++++.|++. |++++.++..|.||||+|+..++ .+++++|++.| ++..|.||||+|+..++.++
T Consensus 155 A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 234 (285)
T 1wdy_A 155 AAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGL 234 (285)
T ss_dssp HHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHH
Confidence 3666778999999987 99999999999999999999998 89999999998 67789999999999999999
Q ss_pred ehhhhccchhHHhhh-cCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceecc
Q psy6362 95 VLVILITDDDVILLR-NRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKEN 153 (157)
Q Consensus 95 v~~~~~~~~~~~ll~-~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~ 153 (157)
+ ++|++ .++ +++.++..|.||||+|+..++.+++++|+++|++++.+|.
T Consensus 235 v---------~~Ll~~~g~-~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d~ 284 (285)
T 1wdy_A 235 V---------QRLLEQEHI-EINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284 (285)
T ss_dssp H---------HHHHHSSSC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred H---------HHHHhccCC-CccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccc
Confidence 9 99998 788 9999999999999999999999999999999999998863
No 74
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.84 E-value=2.5e-20 Score=118.96 Aligned_cols=88 Identities=32% Similarity=0.283 Sum_probs=83.0
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCCCc
Q psy6362 50 DGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDGTT 124 (157)
Q Consensus 50 ~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~t 124 (157)
.|+||||+|+..++.+++++|++.+ ++..|.||||+|+..++.+++ ++|++.|+ +++.+|..|.|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v---------~~Ll~~ga-~~~~~d~~g~t 70 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV---------KLLLEAGA-DVNAKDKNGRT 70 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH---------HHHHHTTC-CTTCCCTTSCC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHH---------HHHHHcCC-CCCccCCCCCC
Confidence 4789999999999999999999988 778899999999999999999 99999999 99999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCC
Q psy6362 125 PLILAARLAIEGMVEDLINFFVH 147 (157)
Q Consensus 125 pl~~A~~~~~~~~~~~Ll~~ga~ 147 (157)
|||+|+..++.+++++|+++|++
T Consensus 71 ~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 71 PLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999985
No 75
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.83 E-value=1e-19 Score=135.81 Aligned_cols=122 Identities=21% Similarity=0.202 Sum_probs=110.6
Q ss_pred hHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhh
Q psy6362 25 LVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVIL 99 (157)
Q Consensus 25 ~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~ 99 (157)
++.....++++.|++.|++++.++..|.||||+|+..|+.+++++|++.| .+..|.||+|+|+..++.+++
T Consensus 46 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~---- 121 (285)
T 1wdy_A 46 AVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKAL---- 121 (285)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHH----
T ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHH----
Confidence 36667789999999999999999999999999999999999999999988 577899999999999999999
Q ss_pred ccchhHHhhhcCCCCCccC----------CCCCCcHHHHHHHhCCHHHHHHHHHc-CCCcceeccCCC
Q psy6362 100 ITDDDVILLRNRATNLNAR----------MHDGTTPLILAARLAIEGMVEDLINF-FVHIFFKENINK 156 (157)
Q Consensus 100 ~~~~~~~ll~~~~~~~~~~----------~~~g~tpl~~A~~~~~~~~~~~Ll~~-ga~~~~~~~~g~ 156 (157)
++|++.++ +++.. +..|.||||.|+..++.++++.|++. |++++.++..|+
T Consensus 122 -----~~Ll~~g~-~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~ 183 (285)
T 1wdy_A 122 -----KFLYKRGA-NVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR 183 (285)
T ss_dssp -----HHHHHTTC-CTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSC
T ss_pred -----HHHHHhCC-CcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCC
Confidence 99999988 88776 77789999999999999999999987 999988887765
No 76
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.83 E-value=1.7e-20 Score=139.65 Aligned_cols=119 Identities=18% Similarity=0.071 Sum_probs=104.5
Q ss_pred hhhhhhHHHHHhcCCC-----------cccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CC--------------C
Q psy6362 28 LITVDDVILLRNRATN-----------LNARMHDGTTPLILAARLAIEGMVEDLINDF-----VC--------------S 77 (157)
Q Consensus 28 ~~~~~~~~~Ll~~g~~-----------i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~--------------~ 77 (157)
....+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|++.| .+ .
T Consensus 59 ~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 138 (260)
T 3jxi_A 59 AGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFY 138 (260)
T ss_dssp TTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCC
T ss_pred cCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCccccccccc
Confidence 3567788888887744 4555668999999999999999999999998 33 4
Q ss_pred CChhHHHHHHhcCCcceehhhhccchhHHhhh---cCCCCCccCCCCCCcHHHHHHHhCC---------HHHHHHHHHcC
Q psy6362 78 PGLHDWFWTLGIEHVCNVLVILITDDDVILLR---NRATNLNARMHDGTTPLILAARLAI---------EGMVEDLINFF 145 (157)
Q Consensus 78 ~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~---~~~~~~~~~~~~g~tpl~~A~~~~~---------~~~~~~Ll~~g 145 (157)
.|.||||+|+..++.+++ ++|++ .|+ +++.+|..|.||||+|+..++ .++++.|+++|
T Consensus 139 ~g~tpL~~A~~~g~~~~v---------~~Ll~~~~~ga-~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g 208 (260)
T 3jxi_A 139 FGELPLSLAACTNQPHIV---------HYLTENGHKQA-DLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKC 208 (260)
T ss_dssp SCSSHHHHHHHTTCHHHH---------HHHHHCSSCCC-CTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHH---------HHHHhccccCC-CCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhC
Confidence 699999999999999999 99999 899 999999999999999998887 69999999999
Q ss_pred CCc-------ceeccCCC
Q psy6362 146 VHI-------FFKENINK 156 (157)
Q Consensus 146 a~~-------~~~~~~g~ 156 (157)
+++ +.++..|+
T Consensus 209 a~~~~~~~~~~~~d~~g~ 226 (260)
T 3jxi_A 209 AKLFPDTNLEALLNNDGL 226 (260)
T ss_dssp HHHCTTCCGGGCCCTTSC
T ss_pred cccccccchhhcccCCCC
Confidence 998 67887775
No 77
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.83 E-value=2.3e-19 Score=130.98 Aligned_cols=123 Identities=16% Similarity=0.099 Sum_probs=110.8
Q ss_pred HhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCC-cceehh
Q psy6362 24 VLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEH-VCNVLV 97 (157)
Q Consensus 24 ~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~-~~~v~~ 97 (157)
.++.....++++.|++.|++++.++..|.||||+|+..++.+++++|++.+ .+..|.||+|+|+..+. ..++
T Consensus 82 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~-- 159 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPT-- 159 (240)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTH--
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHH--
Confidence 345566788999999999999999999999999999999999999999987 67789999999997765 6777
Q ss_pred hhccchhHHhhhcCCCCCccCCC-CCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 98 ILITDDDVILLRNRATNLNARMH-DGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 98 ~~~~~~~~~ll~~~~~~~~~~~~-~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
+++++.++ +++..+. .|.||||+|+..++.+++++|+++|++++.++..|+
T Consensus 160 -------~~L~~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 211 (240)
T 3eu9_A 160 -------RLLLTFNV-SVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGE 211 (240)
T ss_dssp -------HHHHHTTC-CTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSC
T ss_pred -------HHHHhcCC-CcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 88999999 9998887 899999999999999999999999999999988875
No 78
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.82 E-value=6.2e-20 Score=141.59 Aligned_cols=107 Identities=21% Similarity=0.219 Sum_probs=94.9
Q ss_pred hhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC------CCCCChhHHHHHHhcCCcceehhhhccchhH
Q psy6362 32 DDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF------VCSPGLHDWFWTLGIEHVCNVLVILITDDDV 105 (157)
Q Consensus 32 ~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~------~~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~ 105 (157)
+++++|+++|++++.++..|+||||+|+..++.++++.|+... ++..|.||||+|+..++.+++ +
T Consensus 220 ~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv---------~ 290 (337)
T 4g8k_A 220 AITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIA---------E 290 (337)
T ss_dssp HHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHH---------H
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHH---------H
Confidence 5778899999999999999999999999999999999999853 778899999999999999999 9
Q ss_pred HhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceecc
Q psy6362 106 ILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKEN 153 (157)
Q Consensus 106 ~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~ 153 (157)
+|++.|+ +++. .+||++|+..++.+++++|+++||+++....
T Consensus 291 ~Ll~~GA-d~n~-----~~~L~~A~~~~~~~iv~~Ll~~GA~~d~~~p 332 (337)
T 4g8k_A 291 LLCKRGA-STDC-----GDLVMTARRNYDHSLVKVLLSHGAKEDFHPP 332 (337)
T ss_dssp HHHTTSC-SSTT-----CCHHHHHHHTTCHHHHHHHHHTTCCC-----
T ss_pred HHHHCCC-CCCC-----CCHHHHHHHcCCHHHHHHHHHCcCCCCCCCC
Confidence 9999999 8765 4599999999999999999999999987654
No 79
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.82 E-value=1.4e-20 Score=125.69 Aligned_cols=95 Identities=20% Similarity=0.162 Sum_probs=64.8
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhc
Q psy6362 26 VILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILI 100 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~ 100 (157)
+.....++++.|++.|++++.++..|+||||+|+..++.+++++|++.+ ++..|.||||+|+..++.+++
T Consensus 15 ~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v----- 89 (123)
T 3aaa_C 15 LKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCV----- 89 (123)
T ss_dssp HHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHH-----
T ss_pred HHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHH-----
Confidence 4445566666677777777777777777777777777777777777666 455666777777777777777
Q ss_pred cchhHHhhhcCCCCCccCCCCCCcHHHHHH
Q psy6362 101 TDDDVILLRNRATNLNARMHDGTTPLILAA 130 (157)
Q Consensus 101 ~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~ 130 (157)
++|++.++ +++.++..|.||+++|.
T Consensus 90 ----~~Ll~~ga-~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 90 ----KLLLSKGA-DKTVKGPDGLTAFEATD 114 (123)
T ss_dssp ----HHHHHTTC-CTTCCCTTSCCHHHHCC
T ss_pred ----HHHHHcCC-CCCCcCCCCCCHHHHhC
Confidence 66776666 66667777777777663
No 80
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.82 E-value=3e-20 Score=141.12 Aligned_cols=117 Identities=12% Similarity=0.037 Sum_probs=94.8
Q ss_pred hhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCC-hhHHHHHHhcCCcceehhhhcc
Q psy6362 28 LITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPG-LHDWFWTLGIEHVCNVLVILIT 101 (157)
Q Consensus 28 ~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~-~t~l~~a~~~~~~~~v~~~~~~ 101 (157)
....+++++|++.|++++.++..|+||||+|+..|+.+++++|++.| .+..| .||||+|+..++.+++
T Consensus 72 ~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v------ 145 (285)
T 3kea_A 72 LEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIV------ 145 (285)
T ss_dssp SSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHH------
T ss_pred cCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHH------
Confidence 45667888888888888888888888888888888888888888887 56666 6888888888888888
Q ss_pred chhHHhhhcCCCCCccCCC-CCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 102 DDDVILLRNRATNLNARMH-DGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 102 ~~~~~ll~~~~~~~~~~~~-~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
++|++.++ +. .+. .|.||||+|+..++.+++++|+++|++++.++..|+
T Consensus 146 ---~~Ll~~g~-~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~ 195 (285)
T 3kea_A 146 ---SYFLSEIP-ST--FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLF 195 (285)
T ss_dssp ---HHHHTTSC-TT--CCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBC
T ss_pred ---HHHHhCCC-cc--ccccCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCC
Confidence 88888877 44 332 788888888888888888888888888888887664
No 81
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.82 E-value=1.9e-20 Score=140.56 Aligned_cols=118 Identities=20% Similarity=0.165 Sum_probs=104.1
Q ss_pred hhhhhHHHHHhcCCCc-------cc----ccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCC--------------C
Q psy6362 29 ITVDDVILLRNRATNL-------NA----RMHDGTTPLILAARLAIEGMVEDLINDF-----VCS--------------P 78 (157)
Q Consensus 29 ~~~~~~~~Ll~~g~~i-------~~----~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~--------------~ 78 (157)
...+++++|++.|+++ +. +|..|+||||+|+..|+.+++++|++.| .+. .
T Consensus 68 g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~ 147 (273)
T 2pnn_A 68 GQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYF 147 (273)
T ss_dssp TBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCS
T ss_pred CChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccC
Confidence 5678888899988653 22 5678999999999999999999999998 333 6
Q ss_pred ChhHHHHHHhcCCcceehhhhccchhHHhhh---cCCCCCccCCCCCCcHHHHHHHhCC---------HHHHHHHHHcCC
Q psy6362 79 GLHDWFWTLGIEHVCNVLVILITDDDVILLR---NRATNLNARMHDGTTPLILAARLAI---------EGMVEDLINFFV 146 (157)
Q Consensus 79 ~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~---~~~~~~~~~~~~g~tpl~~A~~~~~---------~~~~~~Ll~~ga 146 (157)
|.||||+|+..++.+++ ++|++ .|+ +++.+|..|.||||+|+..++ .+++++|+++|+
T Consensus 148 g~tpL~~A~~~g~~~~v---------~~Ll~~~~~ga-d~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga 217 (273)
T 2pnn_A 148 GELPLSLAACTNQLAIV---------KFLLQNSWQPA-DISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGA 217 (273)
T ss_dssp CBSHHHHHHHTTCHHHH---------HHHHHCSSCCC-CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHH---------HHHHhcccCCC-CceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhh
Confidence 99999999999999999 99999 899 999999999999999999888 799999999999
Q ss_pred Ccc-------eeccCCC
Q psy6362 147 HIF-------FKENINK 156 (157)
Q Consensus 147 ~~~-------~~~~~g~ 156 (157)
+++ .++..|+
T Consensus 218 ~~n~~~~~~~~~d~~g~ 234 (273)
T 2pnn_A 218 KLHPTLKLEEITNRKGL 234 (273)
T ss_dssp HHCTTCCGGGCCCTTSC
T ss_pred hcccccccccccCCCCC
Confidence 986 4777664
No 82
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.82 E-value=5.4e-20 Score=149.78 Aligned_cols=119 Identities=16% Similarity=0.054 Sum_probs=105.5
Q ss_pred hHhhhhhhhHHHHHhcCCCcccc------cCCCCcHHHHHHH---hCCHHHHHHHHHcC-----CCCCChhHHHHHHhcC
Q psy6362 25 LVILITVDDVILLRNRATNLNAR------MHDGTTPLILAAR---LAIEGMVEDLINDF-----VCSPGLHDWFWTLGIE 90 (157)
Q Consensus 25 ~~~~~~~~~~~~Ll~~g~~i~~~------~~~g~t~Lh~a~~---~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~ 90 (157)
++....++.++.|++.|+++|.+ +..|+||||+|+. .|+.+++++|++.| ++..|.||||+|+..+
T Consensus 139 A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g 218 (497)
T 3lvq_E 139 AICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYN 218 (497)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTT
T ss_pred HHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcC
Confidence 35567788999999999999988 8899999999977 89999999999998 7788999999999999
Q ss_pred CcceehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceecc
Q psy6362 91 HVCNVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKEN 153 (157)
Q Consensus 91 ~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~ 153 (157)
+.+++ ++|++.|+ +++.+|..|.||||+|+..|+.+++++|+++|++++....
T Consensus 219 ~~~~v---------~~Ll~~ga-~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~ 271 (497)
T 3lvq_E 219 QPDCL---------KLLLKGRA-LVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPL 271 (497)
T ss_dssp CHHHH---------HHHHHTCC-CCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-------
T ss_pred CHHHH---------HHHHHcCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCcc
Confidence 99999 99999999 9999999999999999999999999999999999987654
No 83
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.82 E-value=6.2e-20 Score=122.58 Aligned_cols=99 Identities=16% Similarity=0.037 Sum_probs=92.1
Q ss_pred cCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCC
Q psy6362 48 MHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDG 122 (157)
Q Consensus 48 ~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g 122 (157)
+..|.||||+|+..|+.++++.|++.+ .+..|.||||+|+..++.+++ ++|++.++ +++.+|..|
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v---------~~Ll~~g~-~~~~~d~~g 73 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEIL---------EFLLLKGA-DINAPDKHH 73 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHH---------HHHHTTTC-CTTCCCTTS
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHH---------HHHHHcCC-CCCcCCCCC
Confidence 457889999999999999999999988 677899999999999999999 99999999 999999999
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 123 TTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 123 ~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
.||||+|+..++.+++++|+++|++++.++..|+
T Consensus 74 ~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 107 (123)
T 3aaa_C 74 ITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGL 107 (123)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 9999999999999999999999999999998885
No 84
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.82 E-value=1.7e-19 Score=136.50 Aligned_cols=129 Identities=17% Similarity=0.122 Sum_probs=111.8
Q ss_pred CccCCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CC
Q psy6362 2 NVVGSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VC 76 (157)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~ 76 (157)
|..+..|.++.+++.-. ........++++.|++.|.+++..+..|+||||+|+..|+.+++++|++.| ++
T Consensus 139 ~~~~~~g~tpL~~a~~~-----~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d 213 (276)
T 4hbd_A 139 DKQNRAGYSPIMLTALA-----TLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQD 213 (276)
T ss_dssp TCCCTTSCCHHHHGGGC-----CCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCCCCCCHHHHHHHH-----HhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Confidence 45556666666664211 011346678899999999999999999999999999999999999999998 78
Q ss_pred CCChhHHHHHHhcCCcceehhhhccchhHHhhh-cCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcC
Q psy6362 77 SPGLHDWFWTLGIEHVCNVLVILITDDDVILLR-NRATNLNARMHDGTTPLILAARLAIEGMVEDLINFF 145 (157)
Q Consensus 77 ~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~-~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~g 145 (157)
..|.||||+|+..++.+++ ++|++ .|+ +++.+|..|.|||++|+..|+.+++++|++++
T Consensus 214 ~~G~TpLh~A~~~g~~~iv---------~~Ll~~~ga-d~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 214 DDGSTALMCACEHGHKEIA---------GLLLAVPSC-DISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp TTSCCHHHHHHHHTCHHHH---------HHHHTSTTC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHCCCHHHH---------HHHHhcCCC-CCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 8899999999999999999 99998 788 99999999999999999999999999999864
No 85
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.82 E-value=1.6e-20 Score=123.97 Aligned_cols=101 Identities=26% Similarity=0.181 Sum_probs=95.9
Q ss_pred cccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCC
Q psy6362 46 ARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMH 120 (157)
Q Consensus 46 ~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~ 120 (157)
.+|..|+||||+|+..++.+++++|++.+ .+..|.||||+|+..++.+++ ++|++.++ +++.++.
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~---------~~Ll~~g~-~~~~~d~ 73 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIV---------KLLLAKGA-DVNARSK 73 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHH---------HHHTTTTC-CTTCCCT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHH---------HHHHHcCC-CCcccCC
Confidence 56889999999999999999999999988 678899999999999999999 99999999 9999999
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 121 DGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 121 ~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
.|.|||++|+..++.+++++|+++|++++.++..|+
T Consensus 74 ~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~ 109 (115)
T 2l6b_A 74 DGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSS 109 (115)
T ss_dssp TCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCcccc
Confidence 999999999999999999999999999999988775
No 86
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.82 E-value=7.8e-20 Score=143.60 Aligned_cols=117 Identities=18% Similarity=0.200 Sum_probs=88.2
Q ss_pred hhhhHHHHHhcC---CCcccccCCCCcHHHHHHHhC---CHHHHHHHHHcC--C-----------CCCChhHHHHHHhcC
Q psy6362 30 TVDDVILLRNRA---TNLNARMHDGTTPLILAARLA---IEGMVEDLINDF--V-----------CSPGLHDWFWTLGIE 90 (157)
Q Consensus 30 ~~~~~~~Ll~~g---~~i~~~~~~g~t~Lh~a~~~~---~~~~~~~Ll~~~--~-----------~~~~~t~l~~a~~~~ 90 (157)
..+++++|++.+ ++++.++..|.||||+|+..+ +.+++++|++.| . +..|.||||+|+..+
T Consensus 211 ~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g 290 (373)
T 2fo1_E 211 DFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVS 290 (373)
T ss_dssp CHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSC
T ss_pred CHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhC
Confidence 345555555554 455555555666666666555 556666666655 1 236788888888888
Q ss_pred CcceehhhhccchhHHhhhcC-CCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 91 HVCNVLVILITDDDVILLRNR-ATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 91 ~~~~v~~~~~~~~~~~ll~~~-~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
+.+++ ++|++.+ + +++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus 291 ~~~~v---------~~Ll~~~~~-~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~ 347 (373)
T 2fo1_E 291 NMPIV---------KYLVGEKGS-NKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDH 347 (373)
T ss_dssp CHHHH---------HHHHHHSCC-CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSC
T ss_pred CHHHH---------HHHHHhcCC-CccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCC
Confidence 88888 8888776 7 8999999999999999999999999999999999999988875
No 87
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.82 E-value=7.4e-20 Score=143.72 Aligned_cols=135 Identities=17% Similarity=0.106 Sum_probs=118.4
Q ss_pred CccCCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-------
Q psy6362 2 NVVGSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF------- 74 (157)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~------- 74 (157)
|..+..|.++++++ +.....+++++|+++|++++.++..|.||||+|+..|+.+++++|++.+
T Consensus 160 n~~d~~g~TpL~~A----------~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~ 229 (373)
T 2fo1_E 160 NAMDCDENTPLMLA----------VLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIE 229 (373)
T ss_dssp TCCCTTSCCHHHHH----------HHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTS
T ss_pred cCCCCCCCCHHHHH----------HHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChh
Confidence 45556666666654 6667789999999999999999999999999999999999999999864
Q ss_pred -CCCCChhHHHHHHhcC---CcceehhhhccchhHHhhhcCCCCCcc--------CCCCCCcHHHHHHHhCCHHHHHHHH
Q psy6362 75 -VCSPGLHDWFWTLGIE---HVCNVLVILITDDDVILLRNRATNLNA--------RMHDGTTPLILAARLAIEGMVEDLI 142 (157)
Q Consensus 75 -~~~~~~t~l~~a~~~~---~~~~v~~~~~~~~~~~ll~~~~~~~~~--------~~~~g~tpl~~A~~~~~~~~~~~Ll 142 (157)
.+..|.||||+|+..+ +.+++ ++|++.++ +++. .+..|.||||+|+..|+.+++++|+
T Consensus 230 ~~d~~g~t~L~~A~~~~~~~~~~~v---------~~Ll~~g~-~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll 299 (373)
T 2fo1_E 230 ELDRNGMTALMIVAHNEGRDQVASA---------KLLVEKGA-KVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLV 299 (373)
T ss_dssp CCCTTSCCHHHHHHHSCSTTHHHHH---------HHHHHHTC-CSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHH
T ss_pred hcCCCCCCHHHHHHHhCCcchHHHH---------HHHHHCCC-CcccccccccCcccccCCCHHHHHHHhCCHHHHHHHH
Confidence 6788999999999987 78889 99999999 8876 5678999999999999999999999
Q ss_pred HcC-CCcceeccCCC
Q psy6362 143 NFF-VHIFFKENINK 156 (157)
Q Consensus 143 ~~g-a~~~~~~~~g~ 156 (157)
+.| ++++.++..|+
T Consensus 300 ~~~~~~~n~~d~~g~ 314 (373)
T 2fo1_E 300 GEKGSNKDKQDEDGK 314 (373)
T ss_dssp HHSCCCTTCCCTTCC
T ss_pred HhcCCCccCcCCCCC
Confidence 876 99999998875
No 88
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.82 E-value=1.8e-19 Score=138.95 Aligned_cols=123 Identities=24% Similarity=0.212 Sum_probs=108.6
Q ss_pred HhHhhhhhhhHHHHHhcCCCcccccC-CCCcHHHHHHHhCCHHHHHHHHHcC----------------------------
Q psy6362 24 VLVILITVDDVILLRNRATNLNARMH-DGTTPLILAARLAIEGMVEDLINDF---------------------------- 74 (157)
Q Consensus 24 ~~~~~~~~~~~~~Ll~~g~~i~~~~~-~g~t~Lh~a~~~~~~~~~~~Ll~~~---------------------------- 74 (157)
.++....+++++.|+++|+++|.++. .|+||||+|+..|+.+++++|++.|
T Consensus 31 ~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (337)
T 4g8k_A 31 KAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKL 110 (337)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHH
Confidence 44667788999999999999999876 5999999999999999999999876
Q ss_pred ----------CCCCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccC----------CCCCCcHHHHHHHhCC
Q psy6362 75 ----------VCSPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNAR----------MHDGTTPLILAARLAI 134 (157)
Q Consensus 75 ----------~~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~----------~~~g~tpl~~A~~~~~ 134 (157)
.+..|.||+|+|+..++.+++ +++++.|+ +++.. +..|.||||+|+..|+
T Consensus 111 ~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~---------~~ll~~ga-~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~ 180 (337)
T 4g8k_A 111 FLSKGADVNECDFYGFTAFMEAAVYGKVKAL---------KFLYKRGA-NVNLRRKTKEDQERLRKGGATALMDAAEKGH 180 (337)
T ss_dssp HHTTTCCTTCBCTTCCBHHHHHHHTTCHHHH---------HHHHHTTC-CTTCCCCCC-----CTTCSCCHHHHHHHHTC
T ss_pred hhhccchhhhhccCCCCHHHHHHHcCcHHHH---------HHHHHcCC-CcchhhccccccccccCCCCcHHHHHHHCCC
Confidence 346688999999999999999 99999988 77653 4458999999999999
Q ss_pred HHHHHHHHH-cCCCcceeccCCC
Q psy6362 135 EGMVEDLIN-FFVHIFFKENINK 156 (157)
Q Consensus 135 ~~~~~~Ll~-~ga~~~~~~~~g~ 156 (157)
.++++.|++ .|++++.++..|+
T Consensus 181 ~~~v~~LL~~~gad~n~~d~~g~ 203 (337)
T 4g8k_A 181 VEVLKILLDEMGADVNACDNMGR 203 (337)
T ss_dssp HHHHHHHHHHSCCCTTCCCTTSC
T ss_pred HHHHHHHHhccCCCcCccCCCCC
Confidence 999999995 6999999988775
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.82 E-value=8.9e-21 Score=128.86 Aligned_cols=122 Identities=20% Similarity=0.047 Sum_probs=105.5
Q ss_pred CCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCC
Q psy6362 5 GSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPG 79 (157)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~ 79 (157)
+..|.++++++ +.....++++.|++.|++++.+|..|+||||+|+..++.+++++|++.+ ++..|
T Consensus 7 ~~~g~t~L~~A----------~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g 76 (137)
T 3c5r_A 7 NHRGETLLHIA----------SIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQN 76 (137)
T ss_dssp CTTCCCHHHHH----------HHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGG
T ss_pred CCCCCCHHHHH----------HHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCC
Confidence 34555655554 5667789999999999999999999999999999999999999999988 66779
Q ss_pred hhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCC
Q psy6362 80 LHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFV 146 (157)
Q Consensus 80 ~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga 146 (157)
.||||+|+..++.+++ ++|++.|+ +++.++..|.||+++|+..+..+++++|.+.+.
T Consensus 77 ~t~L~~A~~~~~~~~v---------~~Ll~~ga-~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 77 DSPLHDAAKNGHVDIV---------KLLLSYGA-SRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp CCHHHHHHHTTCHHHH---------HHHHHTTC-CTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred CCHHHHHHHcCCHHHH---------HHHHHcCC-CCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 9999999999999999 99999999 999999999999999999888888887776554
No 90
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.81 E-value=1.1e-20 Score=135.78 Aligned_cols=114 Identities=13% Similarity=0.093 Sum_probs=100.5
Q ss_pred hhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCC------HHHHHHHHHcC-----CCCCCh-hHHHHHHhcCC-----c
Q psy6362 30 TVDDVILLRNRATNLNARMHDGTTPLILAARLAI------EGMVEDLINDF-----VCSPGL-HDWFWTLGIEH-----V 92 (157)
Q Consensus 30 ~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~------~~~~~~Ll~~~-----~~~~~~-t~l~~a~~~~~-----~ 92 (157)
+.+++++|+++|+++|.+|..|+||||+|+..++ .+++++|++.| ++..|. ||||+|+..+. .
T Consensus 54 ~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~ 133 (186)
T 3t8k_A 54 RYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMI 133 (186)
T ss_dssp HHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHH
Confidence 4578999999999999999999999999999887 57899999999 677898 99999998543 3
Q ss_pred ceehhhhccchhHHhhh-cCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceecc
Q psy6362 93 CNVLVILITDDDVILLR-NRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKEN 153 (157)
Q Consensus 93 ~~v~~~~~~~~~~~ll~-~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~ 153 (157)
+++ ++|++ .|+ +++.+|..|.||||+|+..++.+++++|.++..+.+++++
T Consensus 134 ~iv---------~~Ll~~~ga-d~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~~ 185 (186)
T 3t8k_A 134 PLY---------KLIFSQSGL-QLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKEN 185 (186)
T ss_dssp HHH---------HHHHTSTTC-CTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC-
T ss_pred HHH---------HHHHHhcCC-CCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhcccC
Confidence 477 88998 899 9999999999999999999999999999988777766654
No 91
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.81 E-value=3.6e-19 Score=135.25 Aligned_cols=115 Identities=21% Similarity=0.201 Sum_probs=103.2
Q ss_pred hhhhhhHHHHHhcCCCcc------cccCCCCcHHHHHHHh---CCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcc
Q psy6362 28 LITVDDVILLRNRATNLN------ARMHDGTTPLILAARL---AIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVC 93 (157)
Q Consensus 28 ~~~~~~~~~Ll~~g~~i~------~~~~~g~t~Lh~a~~~---~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~ 93 (157)
...++.+..+++.|.+++ ..+..|+||||+|+.. ++.+++++|++.| ++..|.||||+|+..++.+
T Consensus 140 ~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~ 219 (278)
T 1dcq_A 140 TRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAE 219 (278)
T ss_dssp TTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred hcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHH
Confidence 344566777899999954 4578999999999999 8999999999998 7788999999999999999
Q ss_pred eehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceec
Q psy6362 94 NVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKE 152 (157)
Q Consensus 94 ~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~ 152 (157)
++ ++|++.|+ +++.+|..|.||||+|+..++.+++++|+++|++.....
T Consensus 220 ~v---------~~Ll~~ga-d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~ 268 (278)
T 1dcq_A 220 CL---------KLLLRGKA-SIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSH 268 (278)
T ss_dssp HH---------HHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCCCSS
T ss_pred HH---------HHHHHcCC-CCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcc
Confidence 99 99999999 999999999999999999999999999999999765443
No 92
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.80 E-value=2.2e-19 Score=132.62 Aligned_cols=112 Identities=18% Similarity=0.091 Sum_probs=95.3
Q ss_pred HHHHhcCCCcccccC---CCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhccchhHH
Q psy6362 35 ILLRNRATNLNARMH---DGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILITDDDVI 106 (157)
Q Consensus 35 ~~Ll~~g~~i~~~~~---~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ 106 (157)
+.|+++|++++..+. .+.||||+|+..|+.+++++|++.| .+..|.||||+|+..++.+++ ++
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v---------~~ 72 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIV---------DF 72 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHH---------HH
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHH---------HH
Confidence 467888989877665 4566799999999999999999988 678899999999999999999 99
Q ss_pred hhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceecc-CCC
Q psy6362 107 LLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKEN-INK 156 (157)
Q Consensus 107 ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~-~g~ 156 (157)
|++.|+ +++.+|..|.||||+|+..|+.+++++|+++|++++.+++ .|+
T Consensus 73 Ll~~ga-~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~ 122 (229)
T 2vge_A 73 LITAGA-NVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGA 122 (229)
T ss_dssp HHHTTC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTC
T ss_pred HHHCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCC
Confidence 999999 9999999999999999999999999999999999999863 654
No 93
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.79 E-value=3.6e-19 Score=120.89 Aligned_cols=100 Identities=27% Similarity=0.231 Sum_probs=92.9
Q ss_pred ccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCC
Q psy6362 47 RMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHD 121 (157)
Q Consensus 47 ~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~ 121 (157)
....+.||||+|+..|+.+++++|++.+ .+..|.||||+|+..++.+++ ++|++.++ +++..+..
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v---------~~Ll~~g~-~~~~~d~~ 79 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIV---------EVLLKNGA-DVNAVDAI 79 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH---------HHHHHTTC-CTTCCCTT
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHH---------HHHHHcCC-CCCcCCCC
Confidence 3446789999999999999999999988 677899999999999999999 99999999 99999999
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 122 GTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 122 g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
|.||||+|+..++.+++++|+++|++++.+|..|+
T Consensus 80 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 114 (136)
T 2jab_A 80 GFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGK 114 (136)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCC
Confidence 99999999999999999999999999999998775
No 94
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.79 E-value=7e-19 Score=125.22 Aligned_cols=99 Identities=20% Similarity=0.145 Sum_probs=90.3
Q ss_pred hHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CC-CCChhHHHHHHhcCCcceehhh
Q psy6362 25 LVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VC-SPGLHDWFWTLGIEHVCNVLVI 98 (157)
Q Consensus 25 ~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~-~~~~t~l~~a~~~~~~~~v~~~ 98 (157)
++.....++++.|++ |++++.+|..|+||||+|+..|+.+++++|++.| ++ ..|.||||+|+..++.+++
T Consensus 51 A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v--- 126 (183)
T 3deo_A 51 AARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVV--- 126 (183)
T ss_dssp HHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHH---
T ss_pred HHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHH---
Confidence 355667889999999 9999999999999999999999999999999998 44 7799999999999999999
Q ss_pred hccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCC
Q psy6362 99 LITDDDVILLRNRATNLNARMHDGTTPLILAARLAI 134 (157)
Q Consensus 99 ~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~ 134 (157)
++|++.|+ +++.+|..|.||||+|+..+.
T Consensus 127 ------~~Ll~~ga-~~~~~d~~g~tpl~~A~~~~~ 155 (183)
T 3deo_A 127 ------EALVELGA-DIEVEDERGLTALELAREILK 155 (183)
T ss_dssp ------HHHHHHTC-CTTCCCTTSCCHHHHHHHHHH
T ss_pred ------HHHHHcCC-CCcCCCCCCCCHHHHHHHhcc
Confidence 99999999 999999999999999987643
No 95
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.79 E-value=3.2e-19 Score=130.22 Aligned_cols=101 Identities=19% Similarity=0.168 Sum_probs=95.0
Q ss_pred cccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhccchhHHhhhc-CCCCCccCC
Q psy6362 46 ARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILITDDDVILLRN-RATNLNARM 119 (157)
Q Consensus 46 ~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~-~~~~~~~~~ 119 (157)
..+..|.||||+|+..|+.++++.|++.+ ++..|.||||+|+..++.+++ ++|++. ++ +++.++
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v---------~~Ll~~~g~-~~~~~d 137 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIV---------EMLFTQPNI-ELNQQN 137 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH---------HHHTTSTTC-CCCCCC
T ss_pred ccccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHH---------HHHHcCCCC-CccccC
Confidence 44667899999999999999999999988 678899999999999999999 999998 88 999999
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 120 HDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 120 ~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
..|.||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus 138 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 174 (222)
T 3ehr_A 138 KLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKK 174 (222)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCC
Confidence 9999999999999999999999999999999998885
No 96
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.78 E-value=3.4e-19 Score=132.58 Aligned_cols=112 Identities=21% Similarity=0.175 Sum_probs=101.0
Q ss_pred hHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CC-CCChhHHHHHHhcCCcceehhh
Q psy6362 25 LVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VC-SPGLHDWFWTLGIEHVCNVLVI 98 (157)
Q Consensus 25 ~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~-~~~~t~l~~a~~~~~~~~v~~~ 98 (157)
++.....++++.|++ |++++.+|..|+||||+|+..|+.+++++|++.| ++ ..|.||||+|+..++.+++
T Consensus 52 A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v--- 127 (244)
T 3ui2_A 52 AARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVV--- 127 (244)
T ss_dssp HHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHH---
T ss_pred HHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHH---
Confidence 355667889999999 9999999999999999999999999999999998 44 6799999999999999999
Q ss_pred hccchhHHhhhcCCCCCccCCCCCCcHHHHHH----------------HhCCHHHHHHHHHcCCC
Q psy6362 99 LITDDDVILLRNRATNLNARMHDGTTPLILAA----------------RLAIEGMVEDLINFFVH 147 (157)
Q Consensus 99 ~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~----------------~~~~~~~~~~Ll~~ga~ 147 (157)
++|++.|+ +++.++..|.||||+|+ ..|+.+++++|++++.+
T Consensus 128 ------~~Ll~~ga-~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 128 ------EALVELGA-DIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp ------HHHHHTTC-CTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred ------HHHHHCCC-CCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 99999999 99999999999999887 66788999999986544
No 97
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.78 E-value=5.6e-19 Score=135.61 Aligned_cols=113 Identities=16% Similarity=0.078 Sum_probs=104.0
Q ss_pred HhhhhhhhHHHHHhcCCCccc------ccCCCCcHHHHHHHh---CCHHHHHHHHHcC-----CCCCChhHHHHHHhcCC
Q psy6362 26 VILITVDDVILLRNRATNLNA------RMHDGTTPLILAARL---AIEGMVEDLINDF-----VCSPGLHDWFWTLGIEH 91 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~------~~~~g~t~Lh~a~~~---~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~ 91 (157)
+....++.++.|++.|++++. ++..|+||||+|+.. ++.+++++|++.| ++..|.||||+|+..++
T Consensus 159 ~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~ 238 (301)
T 2b0o_E 159 ICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQ 238 (301)
T ss_dssp HHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTC
T ss_pred hhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 445566778888999999998 688999999999997 8999999999988 67889999999999999
Q ss_pred cceehhhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCc
Q psy6362 92 VCNVLVILITDDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVHI 148 (157)
Q Consensus 92 ~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 148 (157)
.+++ ++|++.|+ +++.+|..|.|||++|+..++.+++++|+++|++.
T Consensus 239 ~~~v---------~~Ll~~ga-d~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~ 285 (301)
T 2b0o_E 239 PDCL---------KLLLKGRA-LVGTVNEAGETALDIARKKHHKECEELLEQAQAGT 285 (301)
T ss_dssp HHHH---------HHHHHTTC-CCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred HHHH---------HHHHHcCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence 9999 99999999 99999999999999999999999999999998763
No 98
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.78 E-value=1.6e-18 Score=114.98 Aligned_cols=97 Identities=30% Similarity=0.282 Sum_probs=91.9
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCCCc
Q psy6362 50 DGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDGTT 124 (157)
Q Consensus 50 ~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~t 124 (157)
+|+||||+|+..|+.+++++|++.+ .+..+.||+|+|+..++.+++ ++|++.++ +++.++..|.|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~---------~~Ll~~g~-~~~~~~~~g~t 70 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV---------KLLLEAGA-DVNAKDKNGRT 70 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHH---------HHHHHTTC-CTTCCCTTSCC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHH---------HHHHHcCC-CCcccCCCCCc
Confidence 4899999999999999999999987 677899999999999999999 99999999 99999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 125 PLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 125 pl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
|||+|+..++.+++++|+++|++++.++..|+
T Consensus 71 ~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 102 (126)
T 1n0r_A 71 PLHLAARNGHLEVVKLLLEAGADVNAKDKNGR 102 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred HHHHHHHcChHHHHHHHHHcCCCCcccCCCCC
Confidence 99999999999999999999999999988775
No 99
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.77 E-value=8.2e-19 Score=135.63 Aligned_cols=110 Identities=15% Similarity=-0.001 Sum_probs=98.4
Q ss_pred HhhhhhhhHHHHHhcCCCccc-ccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCC---cceeh
Q psy6362 26 VILITVDDVILLRNRATNLNA-RMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEH---VCNVL 96 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~-~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~---~~~v~ 96 (157)
+.....+++++|++.|+++|. +|..|+||||+|+..|+.+++++|++.| ++..|.||||+|+..++ .+.+
T Consensus 105 ~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~- 183 (327)
T 1sw6_A 105 FDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTF- 183 (327)
T ss_dssp HHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCH-
T ss_pred HHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHH-
Confidence 344456788899999999999 8999999999999999999999999999 77889999999999988 7888
Q ss_pred hhhccchhHHhhhcCCCCCccCCCCCCcHHHHHHH----hCCHHHHHHHHHc
Q psy6362 97 VILITDDDVILLRNRATNLNARMHDGTTPLILAAR----LAIEGMVEDLINF 144 (157)
Q Consensus 97 ~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~----~~~~~~~~~Ll~~ 144 (157)
+.+++.+..+++.++..|.||||+|+. .++.++++.|++.
T Consensus 184 --------~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~ 227 (327)
T 1sw6_A 184 --------EALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDI 227 (327)
T ss_dssp --------HHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred --------HHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHH
Confidence 777777632789999999999999999 8999999999987
No 100
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.77 E-value=8.3e-19 Score=121.72 Aligned_cols=102 Identities=18% Similarity=0.028 Sum_probs=91.7
Q ss_pred cccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccC
Q psy6362 44 LNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNAR 118 (157)
Q Consensus 44 i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~ 118 (157)
.+..+..|.||||+|+..|+.+++++|++.| .+..|.||||+|+ .++.+++ ++|++.|+ +++.+
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v---------~~Ll~~g~-~~~~~ 73 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVA---------ELLLLHGA-EPNCA 73 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHH---------HHHHTTTC-CCCCC
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHH---------HHHHHcCC-CCCCc
Confidence 3456778999999999999999999999988 6778999999985 8899999 99999999 99999
Q ss_pred CCCCCc-HHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 119 MHDGTT-PLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 119 ~~~g~t-pl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
+..|.| |||+|+..++.+++++|+++|++++.++..|+
T Consensus 74 d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~ 112 (156)
T 1bi7_B 74 DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGR 112 (156)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCC
T ss_pred CCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCC
Confidence 999999 99999999999999999999999999998875
No 101
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.76 E-value=5.9e-19 Score=125.60 Aligned_cols=98 Identities=26% Similarity=0.254 Sum_probs=92.5
Q ss_pred cCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCC-CC
Q psy6362 48 MHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARM-HD 121 (157)
Q Consensus 48 ~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~-~~ 121 (157)
+..|.||||+|+..|+.++++.|++ + .+..|.||||+|+..++.+++ ++|++.|+ +++.++ ..
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v---------~~Ll~~ga-~~~~~~~~~ 109 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCV---------RLLAEAGA-DLDHRDMRG 109 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHH---------HHHHHTTC-CTTCCCSSS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHH---------HHHHHcCC-CCCcCCCCC
Confidence 4578999999999999999999999 6 778899999999999999999 99999999 999888 88
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 122 GTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 122 g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
|.||||+|+..++.+++++|+++|++++.+|..|+
T Consensus 110 g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~ 144 (183)
T 3deo_A 110 GLTALHMAAGYVRPEVVEALVELGADIEVEDERGL 144 (183)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSC
T ss_pred CCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCC
Confidence 99999999999999999999999999999998885
No 102
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.76 E-value=2.8e-18 Score=135.28 Aligned_cols=109 Identities=22% Similarity=0.170 Sum_probs=102.7
Q ss_pred hhhhhHHHHHhcCCCccccc--CCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhcc
Q psy6362 29 ITVDDVILLRNRATNLNARM--HDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILIT 101 (157)
Q Consensus 29 ~~~~~~~~Ll~~g~~i~~~~--~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~~ 101 (157)
..+++++.|++.|++++..+ ..|.||||+|+..++.+++++|++.| .+..|.||||+|+..++.+++
T Consensus 211 g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v------ 284 (368)
T 3jue_A 211 PSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLA------ 284 (368)
T ss_dssp CCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH------
T ss_pred CCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHH------
Confidence 66789999999999999999 89999999999999999999999998 678899999999999999999
Q ss_pred chhHHhhhcCCCCCccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCC
Q psy6362 102 DDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINFFVH 147 (157)
Q Consensus 102 ~~~~~ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~ 147 (157)
++|++.|+ +++..|.+|.||||+|+..++.+++++|+.++..
T Consensus 285 ---~~LL~~Ga-d~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 285 ---CLFLKRGA-DLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp ---HHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred ---HHHHHCcC-CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 99999999 9999999999999999999999999999987643
No 103
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.75 E-value=3.6e-19 Score=127.93 Aligned_cols=119 Identities=13% Similarity=0.021 Sum_probs=100.0
Q ss_pred HhhhhhhhHHHHHhcCCCccccc-CCCCcHHHHHHHhCCH----HHHHHHHHcC-----CCCCChhHHHHHHhcCCc---
Q psy6362 26 VILITVDDVILLRNRATNLNARM-HDGTTPLILAARLAIE----GMVEDLINDF-----VCSPGLHDWFWTLGIEHV--- 92 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~-~~g~t~Lh~a~~~~~~----~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~--- 92 (157)
+.....+.++.++..+ ++.++ ..|+||||+|+..++. +++++|++.| ++..|.||||+|+..++.
T Consensus 14 a~~g~~~~~~~l~~~~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~ 91 (186)
T 3t8k_A 14 AMLGTYEDFLELFEKG--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDIT 91 (186)
T ss_dssp HHHSCHHHHHHHHHHS--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHH
T ss_pred HHcCCHHHHHHHHhcC--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchh
Confidence 4445556666677666 44555 6799999999999875 5899999999 778899999999998863
Q ss_pred ---ceehhhhccchhHHhhhcCCCCCccCCCCCC-cHHHHHHHhC-----CHHHHHHHHH-cCCCcceeccCCC
Q psy6362 93 ---CNVLVILITDDDVILLRNRATNLNARMHDGT-TPLILAARLA-----IEGMVEDLIN-FFVHIFFKENINK 156 (157)
Q Consensus 93 ---~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~-tpl~~A~~~~-----~~~~~~~Ll~-~ga~~~~~~~~g~ 156 (157)
+++ ++|++.|+ +++.+|..|. ||||+|+..+ ..+++++|++ +|++++.+|..|+
T Consensus 92 ~~~~iv---------~~Ll~~Ga-din~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~ 155 (186)
T 3t8k_A 92 GTTELC---------KIFLEKGA-DITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGL 155 (186)
T ss_dssp HHHHHH---------HHHHHTTC-CSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSC
T ss_pred hHHHHH---------HHHHHCCC-CCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCC
Confidence 568 89999999 9999999999 9999999844 4579999999 9999999999886
No 104
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.73 E-value=4.1e-18 Score=126.68 Aligned_cols=98 Identities=26% Similarity=0.254 Sum_probs=92.0
Q ss_pred cCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCC-CC
Q psy6362 48 MHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARM-HD 121 (157)
Q Consensus 48 ~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~-~~ 121 (157)
+..|.||||+|+..|+.++++.|++ + ++..|.||||+|+..++.+++ ++|++.|+ +++.++ ..
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v---------~~Ll~~ga-~~~~~~~~~ 110 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCV---------RLLAEAGA-DLDHRDMRG 110 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHH---------HHHHHTTC-CTTCCCSSS
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHH---------HHHHHcCC-CCCcCCCCC
Confidence 3478899999999999999999999 6 678899999999999999999 99999999 999888 78
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 122 GTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 122 g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
|.||||+|+..|+.+++++|+++|++++.++..|+
T Consensus 111 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~ 145 (244)
T 3ui2_A 111 GLTALHMAAGYVRPEVVEALVELGADIEVEDERGL 145 (244)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 99999999999999999999999999999998875
No 105
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.68 E-value=1.3e-16 Score=104.67 Aligned_cols=89 Identities=21% Similarity=0.108 Sum_probs=79.3
Q ss_pred CcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCcc
Q psy6362 43 NLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNA 117 (157)
Q Consensus 43 ~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~ 117 (157)
.+...+.+|.|+||+|+..|+.+++++|++.+ ++..|.||||+|+..++.+++ ++|++.|+ +++.
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v---------~~Ll~~ga-~~~~ 85 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVV---------KLLLEAGA-DVXA 85 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH---------HHHHHTTC-CTTC
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHH---------HHHHHcCC-Cccc
Confidence 34556778999999999999999999999988 678899999999999999999 99999999 9999
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHH
Q psy6362 118 RMHDGTTPLILAARLAIEGMVEDL 141 (157)
Q Consensus 118 ~~~~g~tpl~~A~~~~~~~~~~~L 141 (157)
++..|.||||+|+..++.+++++|
T Consensus 86 ~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 86 QDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred cccCCCcHHHHHHHcCCHHHHHHh
Confidence 999999999999999999999876
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.64 E-value=1e-15 Score=97.23 Aligned_cols=78 Identities=27% Similarity=0.208 Sum_probs=73.2
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCcceehhhhc
Q psy6362 26 VILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNVLVILI 100 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v~~~~~ 100 (157)
+.....++++.|++.|++++.+|..|+||||+|+..++.+++++|++.| ++..|.||+|+|+..++.+++
T Consensus 10 ~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~----- 84 (93)
T 1n0q_A 10 ARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV----- 84 (93)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH-----
T ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHH-----
Confidence 5566789999999999999999999999999999999999999999988 678899999999999999999
Q ss_pred cchhHHhhhcCC
Q psy6362 101 TDDDVILLRNRA 112 (157)
Q Consensus 101 ~~~~~~ll~~~~ 112 (157)
++|++.|+
T Consensus 85 ----~~Ll~~ga 92 (93)
T 1n0q_A 85 ----KLLLEAGA 92 (93)
T ss_dssp ----HHHHHTTC
T ss_pred ----HHHHHcCC
Confidence 99999887
No 107
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.64 E-value=2e-16 Score=104.06 Aligned_cols=102 Identities=24% Similarity=0.176 Sum_probs=89.3
Q ss_pred CCCCchhhhhhhcccchhhHhHhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCC
Q psy6362 5 GSPGLHDWFWTLGIEHVCNVLVILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPG 79 (157)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~ 79 (157)
+..|.++++++ +.....++++.|++.|++++.+|..|.||||+|+..++.+++++|++.+ .+..|
T Consensus 6 d~~g~t~L~~A----------~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g 75 (115)
T 2l6b_A 6 SKDGNTPLHNA----------AKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDG 75 (115)
T ss_dssp SCSSCCHHHHH----------HHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTC
T ss_pred CCCCCCHHHHH----------HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCC
Confidence 44566666665 5666789999999999999999999999999999999999999999988 67789
Q ss_pred hhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCCCCCcHH
Q psy6362 80 LHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMHDGTTPL 126 (157)
Q Consensus 80 ~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl 126 (157)
.||+|+|+..++.+++ ++|++.|+ +++.++..|.+|-
T Consensus 76 ~tpl~~A~~~~~~~~~---------~~Ll~~ga-~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 76 NTPEHLAKKNGHHEIV---------KLLDAKGA-DVNARSWGSSHHH 112 (115)
T ss_dssp CCTTHHHHTTTCHHHH---------HHHHTTSS-SHHHHSCCCC---
T ss_pred CCHHHHHHHCCCHHHH---------HHHHHcCC-CCCcCCccccccc
Confidence 9999999999999999 99999999 9999999999884
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.62 E-value=9.3e-16 Score=120.90 Aligned_cols=98 Identities=16% Similarity=0.094 Sum_probs=91.3
Q ss_pred CCCCcHHHHHHHh-CCHHHHHHHHHcC-----CC--CCChhHHHHHHhcCCcceehhhhccchhHHhhhcCCCCCccCCC
Q psy6362 49 HDGTTPLILAARL-AIEGMVEDLINDF-----VC--SPGLHDWFWTLGIEHVCNVLVILITDDDVILLRNRATNLNARMH 120 (157)
Q Consensus 49 ~~g~t~Lh~a~~~-~~~~~~~~Ll~~~-----~~--~~~~t~l~~a~~~~~~~~v~~~~~~~~~~~ll~~~~~~~~~~~~ 120 (157)
..+.|+||.|+.. ++.++++.|++.| .+ ..|.||||+|+..++.+++ ++|++.|+ +++.+|.
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv---------~~LL~~Ga-dvn~~d~ 266 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLAC---------EFLLQNGA-NVNQADS 266 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHH---------HHHHHTTC-CTTCCCT
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHH---------HHHHHcCC-CCCCCCC
Confidence 3456799999999 9999999999988 34 6799999999999999999 99999999 9999999
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 121 DGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 121 ~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
.|.||||+|+..++.+++++|+++|++++.+|..|+
T Consensus 267 ~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~ 302 (368)
T 3jue_A 267 AGRGPLHHATILGHTGLACLFLKRGADLGARDSEGR 302 (368)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCC
Confidence 999999999999999999999999999999998875
No 109
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.60 E-value=4.5e-15 Score=112.58 Aligned_cols=96 Identities=15% Similarity=0.024 Sum_probs=88.9
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcC-----------CCCCChhHHHHHHhc---CCcceehhhhccchhHHhhhcCCCCCc
Q psy6362 51 GTTPLILAARLAIEGMVEDLINDF-----------VCSPGLHDWFWTLGI---EHVCNVLVILITDDDVILLRNRATNLN 116 (157)
Q Consensus 51 g~t~Lh~a~~~~~~~~~~~Ll~~~-----------~~~~~~t~l~~a~~~---~~~~~v~~~~~~~~~~~ll~~~~~~~~ 116 (157)
..++|+.|+..+..+.+..++..| .+..|.||||+|+.. ++.+++ ++|++.|+ +++
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v---------~~Ll~~ga-~in 199 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIV---------DFLVQNSG-NLD 199 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHH---------HHHHHHCS-CTT
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHH---------HHHHHCCC-Ccc
Confidence 346899999999999999999887 156799999999999 889999 99999999 999
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 117 ARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 117 ~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus 200 ~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~ 239 (278)
T 1dcq_A 200 KQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGE 239 (278)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCC
Confidence 9999999999999999999999999999999999999885
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.59 E-value=3.9e-15 Score=121.08 Aligned_cols=95 Identities=16% Similarity=0.017 Sum_probs=88.8
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcC-----C------CCCChhHHHHHHh---cCCcceehhhhccchhHHhhhcCCCCCcc
Q psy6362 52 TTPLILAARLAIEGMVEDLINDF-----V------CSPGLHDWFWTLG---IEHVCNVLVILITDDDVILLRNRATNLNA 117 (157)
Q Consensus 52 ~t~Lh~a~~~~~~~~~~~Ll~~~-----~------~~~~~t~l~~a~~---~~~~~~v~~~~~~~~~~~ll~~~~~~~~~ 117 (157)
.+.||.|+..|+.+.++.|++.| . +..|.||||+|+. .++.+++ ++|++.|+ +++.
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v---------~~Ll~~ga-~vn~ 202 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLV---------DFIIQNGG-HLDA 202 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHH---------HHHHHHSC-CTTC
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHH---------HHHHHcCC-CCCc
Confidence 36799999999999999999988 2 6689999999965 8899999 99999999 9999
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 118 RMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 118 ~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
+|..|.||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus 203 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~ 241 (497)
T 3lvq_E 203 KAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGE 241 (497)
T ss_dssp CCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCC
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 999999999999999999999999999999999999885
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.58 E-value=1.1e-16 Score=126.49 Aligned_cols=114 Identities=13% Similarity=-0.029 Sum_probs=88.8
Q ss_pred hHhHhhhhhhhHHHHHhcCCCc---ccccCCCCcHHHHHHHhCCHHHHHHHHHcCCC-------CCChhHHHHHHhcCCc
Q psy6362 23 NVLVILITVDDVILLRNRATNL---NARMHDGTTPLILAARLAIEGMVEDLINDFVC-------SPGLHDWFWTLGIEHV 92 (157)
Q Consensus 23 ~~~~~~~~~~~~~~Ll~~g~~i---~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~-------~~~~t~l~~a~~~~~~ 92 (157)
..++.....++++.|++.|+.. +..+..|.||||+|+..|+.+++++|++.|.+ ....||||+|+..|+.
T Consensus 97 h~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~~G~~ 176 (376)
T 2aja_A 97 FVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHL 176 (376)
T ss_dssp HHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCH
T ss_pred HHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHHHHHHHCCCH
Confidence 3445567788999999998722 23344567899999999999999999988721 1227899999999999
Q ss_pred ceehhhhccchhHHhhhcCCCCCcc--CCCCCCcHHHHHH-HhCCHHHHHHHHHcCC
Q psy6362 93 CNVLVILITDDDVILLRNRATNLNA--RMHDGTTPLILAA-RLAIEGMVEDLINFFV 146 (157)
Q Consensus 93 ~~v~~~~~~~~~~~ll~~~~~~~~~--~~~~g~tpl~~A~-~~~~~~~~~~Ll~~ga 146 (157)
+++ ++|++.|+ +++. .+..|.||||+|+ ..|+.+++++|++.|+
T Consensus 177 eiv---------~~Ll~~ga-~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga 223 (376)
T 2aja_A 177 HVL---------NRLCELAP-TEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV 223 (376)
T ss_dssp HHH---------HHHHHSCG-GGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH
T ss_pred HHH---------HHHHHcCC-ccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC
Confidence 999 99999988 8776 7888899999999 9999999999887664
No 112
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.58 E-value=7.4e-15 Score=112.60 Aligned_cols=96 Identities=16% Similarity=0.033 Sum_probs=88.5
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcC----C-------CCCChhHHHHHHhc---CCcceehhhhccchhHHhhhcCCCCCc
Q psy6362 51 GTTPLILAARLAIEGMVEDLINDF----V-------CSPGLHDWFWTLGI---EHVCNVLVILITDDDVILLRNRATNLN 116 (157)
Q Consensus 51 g~t~Lh~a~~~~~~~~~~~Ll~~~----~-------~~~~~t~l~~a~~~---~~~~~v~~~~~~~~~~~ll~~~~~~~~ 116 (157)
..++|+.|+..+..+.++.|++.+ . +..|.||||+|+.. ++.+++ ++|++.|+ +++
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv---------~~Ll~~ga-dvn 220 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLV---------DFIIQNGG-HLD 220 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHH---------HHHHHHSS-CTT
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHH---------HHHHhcCC-CCC
Confidence 346799999999999999999887 1 56789999999987 788999 99999999 999
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcceeccCCC
Q psy6362 117 ARMHDGTTPLILAARLAIEGMVEDLINFFVHIFFKENINK 156 (157)
Q Consensus 117 ~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 156 (157)
.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus 221 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~ 260 (301)
T 2b0o_E 221 AKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGE 260 (301)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSC
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 9999999999999999999999999999999999998885
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.48 E-value=4.7e-15 Score=117.14 Aligned_cols=102 Identities=9% Similarity=-0.055 Sum_probs=84.0
Q ss_pred hhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC--------CCCCChhHHHHHHhcCCcceehhhhccc
Q psy6362 31 VDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF--------VCSPGLHDWFWTLGIEHVCNVLVILITD 102 (157)
Q Consensus 31 ~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~--------~~~~~~t~l~~a~~~~~~~~v~~~~~~~ 102 (157)
.+.++.+.++|.+. .||||+|++.|+.+++++|++.+ .+..+.||||+|+..|+.+++
T Consensus 79 ~~~~~~l~~~g~~~-------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv------- 144 (376)
T 2aja_A 79 KQLWSDAHKKGIKS-------EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVL------- 144 (376)
T ss_dssp TTHHHHHHHHTCCH-------HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHH-------
T ss_pred HHHHHHHHHcCCCc-------CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHH-------
Confidence 34556666666554 49999999999999999999987 234578999999999999999
Q ss_pred hhHHhhhcCCCCC---ccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCcce
Q psy6362 103 DDVILLRNRATNL---NARMHDGTTPLILAARLAIEGMVEDLINFFVHIFF 150 (157)
Q Consensus 103 ~~~~ll~~~~~~~---~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 150 (157)
++|++.|+ ++ +..+.+ .||||+|+..|+.+++++|+++|++++.
T Consensus 145 --~~Ll~~ga-d~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~ 191 (376)
T 2aja_A 145 --NRLCELAP-TEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEAT 191 (376)
T ss_dssp --HHHHHSCT-TTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHH
T ss_pred --HHHHhCCC-CccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccch
Confidence 99999997 52 333333 9999999999999999999999999775
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.44 E-value=2.9e-13 Score=88.52 Aligned_cols=70 Identities=21% Similarity=0.139 Sum_probs=65.4
Q ss_pred HhhhhhhhHHHHHhcCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHcC-----CCCCChhHHHHHHhcCCccee
Q psy6362 26 VILITVDDVILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLINDF-----VCSPGLHDWFWTLGIEHVCNV 95 (157)
Q Consensus 26 ~~~~~~~~~~~Ll~~g~~i~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~-----~~~~~~t~l~~a~~~~~~~~v 95 (157)
+.....++++.|++.|++++.+|..|.||||+|+..++.+++++|++.| .+..|.||+|+|+..++.+++
T Consensus 32 ~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~ 106 (110)
T 2zgd_A 32 ARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLA 106 (110)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCCHHHH
Confidence 6667789999999999999999999999999999999999999999998 677899999999999998887
No 115
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=27.72 E-value=1.8e+02 Score=23.13 Aligned_cols=25 Identities=28% Similarity=0.341 Sum_probs=22.1
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcC
Q psy6362 50 DGTTPLILAARLAIEGMVEDLINDF 74 (157)
Q Consensus 50 ~g~t~Lh~a~~~~~~~~~~~Ll~~~ 74 (157)
-|.|.+|+|+++.+.+++..|+..+
T Consensus 68 ~g~tlvhlair~~r~~~l~~ll~~~ 92 (454)
T 3zrh_A 68 VGYTLVHLAIRFQRQDMLAILLTEV 92 (454)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCchhhhhhhhhhhhhHHHHhhhcc
Confidence 6899999999999999999888743
Done!