BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6369
(123 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2NT2|A Chain A, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|B Chain B, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|C Chain C, Crystal Structure Of Slingshot Phosphatase 2
Length = 145
Score = 161 bits (407), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 72/111 (64%), Positives = 90/111 (81%)
Query: 3 GVCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVHC 62
GV +ILNVTREIDNFFPG+F+Y NIRVYD++ TDLL +W++TYK+I+ AK GSK LVH
Sbjct: 29 GVRYILNVTREIDNFFPGVFEYHNIRVYDEEATDLLAYWNDTYKFISKAKKHGSKCLVHS 88
Query: 63 KMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETYQ 113
KMG+SRSAS VIAYAMK Y W+L RA +V+++R KPN +F+ QLE YQ
Sbjct: 89 KMGVSRSASTVIAYAMKEYGWNLDRAYDYVKERRTVTKPNPSFMRQLEEYQ 139
>pdb|3S4E|A Chain A, Crystal Structrue Of A Novel Mitogen-Activated Protein
Kinase Phosphatase, Skrp1
Length = 144
Score = 87.0 bits (214), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 65/112 (58%)
Query: 4 VCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVHCK 63
V HILNV ++N F F Y +I + D +T++L ++ +++I AK + VLVH
Sbjct: 30 VTHILNVAYGVENAFLSDFTYKSISILDLPETNILSYFPECFEFIEEAKRKDGVVLVHSN 89
Query: 64 MGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETYQVG 115
G+SR+A++VI + M + T A + V+ R I PN+ F+ QL TYQ G
Sbjct: 90 AGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPSICPNSGFMEQLRTYQEG 141
>pdb|2R0B|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase-like
Serine/threonine/tyrosine-interacting Protein
Length = 154
Score = 84.0 bits (206), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 5/116 (4%)
Query: 3 GVCHILNVTREID-NF----FPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSK 57
G+ HI+ + + I+ NF F +F Y + + D+ ++++ + T ++I + G K
Sbjct: 33 GITHIICIRQNIEANFIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQMGGK 92
Query: 58 VLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETYQ 113
VLVH GISRSA+ VIAY M+ + A A+V+++R CI PNA F+ QL+ Y+
Sbjct: 93 VLVHGNAGISRSAAFVIAYIMETFGMKYRDAFAYVQERRFCINPNAGFVHQLQEYE 148
>pdb|1M3G|A Chain A, Solution Structure Of The Catalytic Domain Of Mapk
Phosphatase Pac-1: Insights Into Substrate-Induced
Enzymatic Activation
Length = 145
Score = 82.8 bits (203), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 64/114 (56%)
Query: 3 GVCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVHC 62
G+ +LNV+ N F G+F Y +I V D+ ++ + +I KN G +VLVH
Sbjct: 29 GITAVLNVSASCPNHFEGLFRYKSIPVEDNQMVEISAWFQEAIGFIDWVKNSGGRVLVHS 88
Query: 63 KMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETYQVGV 116
+ GISRSA++ +AY M++ L A V+Q+R I PN +F+ QL ++ V
Sbjct: 89 QAGISRSATICLAYLMQSRRVRLDEAFDFVKQRRGVISPNFSFMGQLLQFETQV 142
>pdb|3EZZ|A Chain A, Crystal Structure Of Human Mkp-2
pdb|3EZZ|B Chain B, Crystal Structure Of Human Mkp-2
pdb|3EZZ|C Chain C, Crystal Structure Of Human Mkp-2
pdb|3EZZ|D Chain D, Crystal Structure Of Human Mkp-2
pdb|3EZZ|E Chain E, Crystal Structure Of Human Mkp-2
pdb|3EZZ|F Chain F, Crystal Structure Of Human Mkp-2
Length = 144
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 64/114 (56%)
Query: 3 GVCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVHC 62
G+ +LNV+ + N F G + Y I V D+ K D+ + +YI + K+ +VLVH
Sbjct: 29 GITALLNVSSDCPNHFEGHYQYKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHS 88
Query: 63 KMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETYQVGV 116
+ GISRSA++ +AY M L A V+Q+R+ I PN +F+ QL ++ V
Sbjct: 89 QAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFMGQLLQFESQV 142
>pdb|3LJ8|A Chain A, Crystal Structure Of Mkp-4
Length = 146
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 3 GVCHILNVTREIDNFFP--GIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLV 60
G+ +ILNVT + NFF G F Y I + D +L + + ++I A +Q VLV
Sbjct: 28 GIRYILNVTPNLPNFFEKNGDFHYKQIPISDHWSQNLSRFFPEAIEFIDEALSQNCGVLV 87
Query: 61 HCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETYQ 113
HC G+SRS +V +AY M+ + L A V++K++ I PN NF+ QL ++
Sbjct: 88 HCLAGVSRSVTVTVAYLMQKLHLSLNDAYDLVKRKKSNISPNFNFMGQLLDFE 140
>pdb|2G6Z|A Chain A, Crystal Structure Of Human Dusp5
pdb|2G6Z|B Chain B, Crystal Structure Of Human Dusp5
pdb|2G6Z|C Chain C, Crystal Structure Of Human Dusp5
Length = 211
Score = 75.5 bits (184), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%)
Query: 7 ILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVHCKMGI 66
+LNV+R Y I V D D+ H+ +I + +G KVLVH + GI
Sbjct: 35 LLNVSRRTSEACMTHLHYKWIPVEDSHTADISSHFQEAIDFIDCVREKGGKVLVHSEAGI 94
Query: 67 SRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETYQVGVQPS 119
SRS ++ +AY MK + L A +++Q+R+ + PN F+ QL Y+ + PS
Sbjct: 95 SRSPTICMAYLMKTKQFRLKEAFDYIKQRRSMVSPNFGFMGQLLQYESEILPS 147
>pdb|2HCM|A Chain A, Crystal Structure Of Mouse Putative Dual Specificity
Phosphatase Complexed With Zinc Tungstate, New York
Structural Genomics Consortium
Length = 164
Score = 73.2 bits (178), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 3 GVCHILNVTREIDNF-FPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVH 61
G+ +NV+R+ PG+ + + V+DD DLL H + T + +A G LV+
Sbjct: 37 GITLCVNVSRQQPGPRAPGVAEL-RVPVFDDPAEDLLTHLEPTCAAMEAAVRDGGSCLVY 95
Query: 62 CKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETYQVGVQPSLL 121
CK G SRSA+V AY M+ L RA V+ R +PN F QL+ Y+ +Q +
Sbjct: 96 CKNGRSRSAAVCTAYLMRHRGHSLDRAFQMVKSARPVAEPNLGFWAQLQKYEQTLQAQAI 155
Query: 122 L 122
L
Sbjct: 156 L 156
>pdb|2HXP|A Chain A, Crystal Structure Of The Human Phosphatase (Dusp9)
Length = 155
Score = 73.2 bits (178), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 3 GVCHILNVTREIDNFFP--GIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLV 60
G+ +ILNVT + NFF G F Y I + D +L + + ++I A +Q VLV
Sbjct: 31 GIRYILNVTPNLPNFFEKNGDFHYKQIPISDHWSQNLSRFFPEAIEFIDEALSQNCGVLV 90
Query: 61 HCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETYQ 113
H G+SRS +V +AY M+ + L A V++K++ I PN NF+ QL ++
Sbjct: 91 HSLAGVSRSVTVTVAYLMQKLHLSLNDAYDLVKRKKSNISPNFNFMGQLLDFE 143
>pdb|2OUD|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mkp5
Length = 177
Score = 72.0 bits (175), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 6/124 (4%)
Query: 4 VCHILNVTREID--NFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVH 61
+ +++NVT + ++ G+F+Y + D +K +L ++++ +++I A G +L+H
Sbjct: 34 IGYVINVTTHLPLYHYEKGLFNYKRLPATDSNKQNLRQYFEEAFEFIEEAHQCGKGLLIH 93
Query: 62 CKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETYQV----GVQ 117
C+ G+SRSA++VIAY MK +T A V+ KR I PN NF+ QL ++ GV
Sbjct: 94 CQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDLNNGVT 153
Query: 118 PSLL 121
P +L
Sbjct: 154 PRIL 157
>pdb|1MKP|A Chain A, Crystal Structure Of Pyst1 (Mkp3)
Length = 144
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 3 GVCHILNVTREIDNFF--PGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLV 60
G+ +ILNVT + N F G F Y I + D +L + + +I A+ + VLV
Sbjct: 29 GIKYILNVTPNLPNLFENAGEFKYKQIPISDHWSQNLSQFFPEAISFIDEARGKNCGVLV 88
Query: 61 HCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETYQ 113
H GISRS +V +AY M+ N + A V+ K++ I PN NF+ QL ++
Sbjct: 89 HSLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISPNFNFMGQLLDFE 141
>pdb|1WRM|A Chain A, Crystal Structure Of Jsp-1
Length = 165
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 4 VCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVHCK 63
V HIL+V G+ Y I D +L +H+ + K+I + +G LVHC
Sbjct: 33 VTHILSVHDSARPMLEGV-KYLCIPAADSPSQNLTRHFKESIKFIHECRLRGESCLVHCL 91
Query: 64 MGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETYQ 113
G+SRS ++VIAY M ++ A+ VR R+C PN F QL+ ++
Sbjct: 92 AGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRSCANPNVGFQRQLQEFE 141
>pdb|1ZZW|A Chain A, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
pdb|1ZZW|B Chain B, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
Length = 149
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Query: 4 VCHILNVTREID--NFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVH 61
+ +++NVT + ++ G+F+Y + D +K +L ++++ +++I A G +L+H
Sbjct: 30 IGYVINVTTHLPLYHYEKGLFNYKRLPATDSNKQNLRQYFEEAFEFIEEAHQCGKGLLIH 89
Query: 62 CKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETYQ 113
C+ G+SRSA++VIAY MK +T A V+ KR I PN NF+ QL ++
Sbjct: 90 CQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFE 141
>pdb|2WGP|A Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14
pdb|2WGP|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14
Length = 190
Score = 69.3 bits (168), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 57/111 (51%)
Query: 3 GVCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVHC 62
G+ I+N T EI NF F+Y + + D + ++D I S + LVHC
Sbjct: 51 GITCIVNATIEIPNFNWPQFEYVKVPLADMPHAPIGLYFDTVADKIHSVSRKHGATLVHC 110
Query: 63 KMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETYQ 113
G+SRSA++ IAY MK +N L A V+ +R I+PN F QL Y+
Sbjct: 111 AAGVSRSATLCIAYLMKFHNVCLLEAYNWVKARRPVIRPNVGFWRQLIDYE 161
>pdb|2E0T|A Chain A, Crystal Structure Of Catalytic Domain Of Dual Specificity
Phosphatase 26, Ms0830 From Homo Sapiens
Length = 151
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 3 GVCHILNVT----REIDNFFPGI-FDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQ-GS 56
G+ H+LN + R + G+ Y + +D D+ H+ +I A +Q G
Sbjct: 27 GITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPAFDMSIHFQTAADFIHRALSQPGG 86
Query: 57 KVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQL 109
K+LVHC +G+SRSA++V+AY M ++ L A+ V+ R I PN F+ QL
Sbjct: 87 KILVHCAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKDHRGII-PNRGFLRQL 138
>pdb|4HRF|A Chain A, Atomic Structure Of Dusp26
pdb|4HRF|B Chain B, Atomic Structure Of Dusp26
pdb|4HRF|C Chain C, Atomic Structure Of Dusp26
pdb|4HRF|D Chain D, Atomic Structure Of Dusp26
Length = 160
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 7/113 (6%)
Query: 3 GVCHILNVT----REIDNFFPGI-FDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQ-GS 56
G+ H+LN + R + G+ Y + +D D+ H+ +I A +Q G
Sbjct: 28 GITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPAFDMSIHFQTAADFIHRALSQPGG 87
Query: 57 KVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQL 109
K+LVH +G+SRSA++V+AY M ++ L A+ V+ R I PN F+ QL
Sbjct: 88 KILVHSAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKDHRGII-PNRGFLRQL 139
>pdb|2GWO|A Chain A, Crystal Structure Of Tmdp
pdb|2GWO|B Chain B, Crystal Structure Of Tmdp
pdb|2GWO|C Chain C, Crystal Structure Of Tmdp
pdb|2GWO|D Chain D, Crystal Structure Of Tmdp
Length = 198
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 67/117 (57%), Gaps = 11/117 (9%)
Query: 3 GVCHILNVTR---EIDN---FFPGI-FDYCNIRVYDDDKTDLLKHWDNTYKYITSAKN-- 53
G+ H++N ++D F+ G+ +Y I D+ DL ++ +YI +A +
Sbjct: 71 GITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADDNPFFDLSVYFLPVARYIRAALSVP 130
Query: 54 QGSKVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLE 110
QG +VLVHC MG+SRSA++V+A+ M N L A+ V+ RN I PN+ F+ QL+
Sbjct: 131 QG-RVLVHCAMGVSRSATLVLAFLMICENMTLVEAIQTVQAHRN-ICPNSGFLRQLQ 185
>pdb|2PQ5|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|B Chain B, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|C Chain C, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|D Chain D, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
Length = 205
Score = 62.0 bits (149), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 67/117 (57%), Gaps = 11/117 (9%)
Query: 3 GVCHILNVTR---EIDN---FFPGI-FDYCNIRVYDDDKTDLLKHWDNTYKYITSAKN-- 53
G+ H++N ++D F+ G+ +Y I D+ DL ++ +YI +A +
Sbjct: 71 GITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADDNPFFDLSVYFLPVARYIRAALSVP 130
Query: 54 QGSKVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLE 110
QG +VLVHC MG+SRSA++V+A+ M N L A+ V+ RN I PN+ F+ QL+
Sbjct: 131 QG-RVLVHCAMGVSRSATLVLAFLMIYENMTLVEAIQTVQAHRN-ICPNSGFLRQLQ 185
>pdb|2ESB|A Chain A, Crystal Structure Of Human Dusp18
Length = 188
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%)
Query: 7 ILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVHCKMGI 66
++NV+ E+ N Y + V D + L +D +I S + + + L+HC G+
Sbjct: 49 VINVSVEVVNTLYEDIQYMQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGV 108
Query: 67 SRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETYQ 113
SRSA++ +AY MK + L A + R I+PN+ F QL Y+
Sbjct: 109 SRSAALCLAYLMKYHAMSLLDAHTWTKSCRPIIRPNSGFWEQLIHYE 155
>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
Length = 183
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Query: 3 GVCHILNVTREID--------NFF--PGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAK 52
G+ H+LN NF+ GI Y I+ D + +L +++ +I A
Sbjct: 53 GITHVLNAAEGRSFMHVNTNANFYKDSGI-TYLGIKANDTQEFNLSAYFERAADFIDQAL 111
Query: 53 NQ-GSKVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQL 109
Q +VLVHC+ G SRS ++VIAY M D+ A++ VRQ R I PN F+ QL
Sbjct: 112 AQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQL 168
>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
Length = 184
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Query: 3 GVCHILNVTREID--------NFF--PGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAK 52
G+ H+LN NF+ GI Y I+ D + +L +++ +I A
Sbjct: 54 GITHVLNAAEGRSFMHVNTNANFYKDSGI-TYLGIKANDTQEFNLSAYFERAADFIDQAL 112
Query: 53 NQ-GSKVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQL 109
Q +VLVHC+ G SRS ++VIAY M D+ A++ VRQ R I PN F+ QL
Sbjct: 113 AQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQL 169
>pdb|1J4X|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase C124s
Mutant- Peptide Complex
Length = 184
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 13/118 (11%)
Query: 3 GVCHILNVTREID--------NFF--PGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAK 52
G+ H+LN NF+ GI Y I+ D + +L +++ +I A
Sbjct: 54 GITHVLNAAEGRSFMHVNTNANFYKDSGI-TYLGIKANDTQEFNLSAYFERAADFIDQAL 112
Query: 53 NQ-GSKVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQL 109
Q +VLVH + G SRS ++VIAY M D+ A++ VRQ R I PN F+ QL
Sbjct: 113 AQKNGRVLVHSREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQL 169
>pdb|2J16|B Chain B, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%)
Query: 48 ITSAKNQGSKVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFIT 107
I +A + K+L+HC+ G+SRSA+++IAY MK +N L + ++ + + I P+ I
Sbjct: 110 IHAATTKREKILIHCQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIF 169
Query: 108 QLETYQVGV 116
QL ++V +
Sbjct: 170 QLMEWEVAL 178
>pdb|1YZ4|A Chain A, Crystal Structure Of Dusp15
pdb|1YZ4|B Chain B, Crystal Structure Of Dusp15
Length = 160
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Query: 4 VCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVHCK 63
+ HI+++ I Y I V D + + KH+ +I + G LVH
Sbjct: 34 ITHIISIHESPQPLLQDI-TYLRIPVADTPEVPIKKHFKECINFIHCCRLNGGNCLVHSF 92
Query: 64 MGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETY 112
GISRS ++V AY M + ++ R PN F QLE +
Sbjct: 93 AGISRSTTIVTAYVMTVTGLGWRDVLEAIKATRPIANPNPGFRQQLEEF 141
>pdb|2Y96|A Chain A, Structure Of Human Dual-Specificity Phosphatase 27
pdb|2Y96|B Chain B, Structure Of Human Dual-Specificity Phosphatase 27
Length = 219
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 56 SKVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQL 109
SK+LVHC MG SRSA++V+AY M + L A+ V + R C+ PN F+ QL
Sbjct: 140 SKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAIQQVAKNR-CVLPNRGFLKQL 192
>pdb|2J17|A Chain A, Ptyr Bound Form Of Sdp-1
pdb|2J17|B Chain B, Ptyr Bound Form Of Sdp-1
Length = 182
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 42/69 (60%)
Query: 48 ITSAKNQGSKVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFIT 107
I +A + K+L+H + G+SRSA+++IAY MK +N L + ++ + + I P+ I
Sbjct: 110 IHAATTKREKILIHSQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIF 169
Query: 108 QLETYQVGV 116
QL ++V +
Sbjct: 170 QLMEWEVAL 178
>pdb|2J16|A Chain A, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 42/69 (60%)
Query: 48 ITSAKNQGSKVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFIT 107
I +A + K+L+H + G+SRSA+++IAY MK +N L + ++ + + I P+ I
Sbjct: 110 IHAATTKREKILIHXQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIF 169
Query: 108 QLETYQVGV 116
QL ++V +
Sbjct: 170 QLMEWEVAL 178
>pdb|2Q05|A Chain A, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|B Chain B, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|C Chain C, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|D Chain D, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
Length = 195
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%)
Query: 6 HILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVHCKMG 65
++LN+T + + +I + DD TD+ K++D+ +++ + VLVHC G
Sbjct: 76 YVLNLTXDKYTLPNSNINIIHIPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCAAG 135
Query: 66 ISRSASVVIAY 76
++RS + ++AY
Sbjct: 136 VNRSGAXILAY 146
>pdb|2P4D|A Chain A, Structure-Assisted Discovery Of Variola Major H1
Phosphatase Inhibitors
Length = 172
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%)
Query: 6 HILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVHCKMG 65
++LN+T + + +I + DD TD+ K++D+ +++ + VLVHC G
Sbjct: 55 YVLNLTXDKYTLPNSNINIIHIPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCVAG 114
Query: 66 ISRSASVVIAY 76
++RS + ++AY
Sbjct: 115 VNRSGAXILAY 125
>pdb|2RF6|A Chain A, Crystal Structure Of The Vaccinia Virus Dual-Specificity
Phosphatase Vh1
pdb|3CM3|A Chain A, High Resolution Crystal Structure Of The Vaccinia Virus
Dual-Specificity Phosphatase Vh1
Length = 176
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 41/73 (56%)
Query: 6 HILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVHCKMG 65
++LN+T + + +I + DD TD+ K++D+ +++ + VLVH G
Sbjct: 59 YVLNLTMDKYTLPNSNINIIHIPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHSAAG 118
Query: 66 ISRSASVVIAYAM 78
++RS ++++AY M
Sbjct: 119 VNRSGAMILAYLM 131
>pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1
Length = 157
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 55 GSKVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRN--CIKPN 102
G V VHCK G SRSA++V AY ++ +NW A+ + + R+ I+P+
Sbjct: 89 GQCVYVHCKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPS 138
>pdb|3EMU|A Chain A, Crystal Structure Of A Leucine Rich Repeat And Phosphatase
Domain Containing Protein From Entamoeba Histolytica
Length = 161
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 48/112 (42%)
Query: 2 DGVCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVH 61
+ + IL V E+ + F D + + ++ L N K+I + + VL+
Sbjct: 34 NNISSILLVGIEVPSLFKDQCDILRLDIVSEEGHQLYDSIPNAIKFIIRSIQRKEGVLII 93
Query: 62 CKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETYQ 113
G++++ ++VIA+ M A V+ I + FI QL+ ++
Sbjct: 94 SGTGVNKAPAIVIAFLMYYQRLSFINAFNKVQGLYPLIDIESGFILQLKLFE 145
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 46 KYITSAKNQGSKVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKR--NCIKPNA 103
+++ +N + VHCK G+ R+ +++ Y MK Y +A VR R + I P
Sbjct: 260 EFLDICENAEGAIAVHCKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQ 319
Query: 104 NFITQLET 111
F+ +T
Sbjct: 320 QFLVMKQT 327
>pdb|3RGQ|A Chain A, Crystal Structure Of Ptpmt1 In Complex With Pi(5)p
Length = 156
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 55 GSKVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRN--CIKPN 102
G V VH K G SRSA++V AY ++ +NW A+ + + R+ I+P+
Sbjct: 90 GQCVYVHSKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPS 139
>pdb|1OHE|A Chain A, Structure Of Cdc14b Phosphatase With A Peptide Ligand
Length = 348
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 46 KYITSAKNQGSKVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKR--NCIKPNA 103
+++ +N + VH K G+ R+ +++ Y MK Y +A VR R + I P
Sbjct: 260 EFLDICENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQ 319
Query: 104 NFITQLET 111
F+ +T
Sbjct: 320 QFLVMKQT 327
>pdb|2C46|A Chain A, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|B Chain B, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|C Chain C, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|D Chain D, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
Length = 241
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 42 DNTYKYIT-----SAKNQGSKVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKR 96
+NT +I + +N + VHC G +R+ ++ A+ ++ +W + A+A Q R
Sbjct: 123 ENTETFIRLCERFNERNPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQAR 182
>pdb|2B49|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase, Non-Receptor Type 3
Length = 287
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 14/95 (14%)
Query: 32 DDKTDLLKHWDNTYKYITSAKNQGSKVLVHCKMGISRSASVVIAYA--------MKAYNW 83
DD +D L+ Y+ S + VLVHC GI R+ +V + Y
Sbjct: 190 DDSSDFLEF----VNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNLPIYPL 245
Query: 84 DLTRAMAHVRQKRNCIKPNANFITQ--LETYQVGV 116
D+ R M R F+ + L Y+ G+
Sbjct: 246 DIVRKMRDQRAMMVQTSSQYKFVCEAILRVYEEGL 280
>pdb|3M4U|A Chain A, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
pdb|3M4U|B Chain B, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
Length = 306
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 56 SKVLVHCKMGISRSASVVIAYA 77
S +LVHC GI R+ +++ AYA
Sbjct: 223 SPILVHCSAGIGRTGTLIGAYA 244
>pdb|1I9S|A Chain A, Crystal Structure Of The Rna Triphosphatase Domain Of
Mouse Mrna Capping Enzyme
Length = 210
Score = 30.0 bits (66), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 60 VHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKR 96
VHC G +R+ ++ A+ ++ +W + A+A Q R
Sbjct: 124 VHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQAR 160
>pdb|3NME|A Chain A, Structure Of A Plant Phosphatase
pdb|3NME|B Chain B, Structure Of A Plant Phosphatase
Length = 294
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
Query: 25 CNIRVYD--DDKTDLLKHWDNTYKYITSAKNQGSKVLVHCKMGISRSASVVIAYAMKAYN 82
C IR +D D + L YK + K G VH G R+ +V + Y
Sbjct: 77 CEIRDFDAFDLRXRLPAVVGTLYKAV---KRNGGVTYVHSTAGXGRAPAVALTYXFWVQG 133
Query: 83 WDLTRAMAHVRQKRNCI 99
+ L A + KR+C
Sbjct: 134 YKLXEAHKLLXSKRSCF 150
>pdb|4AZ1|A Chain A, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
pdb|4AZ1|B Chain B, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
Length = 302
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 48 ITSAKNQGS--KVLVHCKMGISRSASVVIAYA 77
+T+ KN + V+VHC GI R+ +++ AYA
Sbjct: 210 LTNVKNSPTTVPVVVHCSAGIGRTGTLIGAYA 241
>pdb|2NLK|A Chain A, Crystal Structure Of D1 And D2 Catalytic Domains Of Human
Protein Tyrosine Phosphatase Gamma (D1+d2 Ptprg)
Length = 627
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 12/73 (16%)
Query: 54 QGSKVLVHCKMGISRSASVVIAYAMKAYNWDLTRA-----MAHVRQKRNCIKPNANFITQ 108
+ VLVHC G+ R+ + ++ +M D + + H+R +R N++ Q
Sbjct: 227 ETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQR-------NYLVQ 279
Query: 109 LETYQVGVQPSLL 121
E + + +LL
Sbjct: 280 TEEQYIFIHDALL 292
>pdb|2PBN|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma
Length = 313
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Query: 58 VLVHCKMGISRSASVVIAYAMKAYNWDLTRA-----MAHVRQKRNCIKPNANFITQLETY 112
VLVHC G+ R+ + ++ +M D + + H+R +R N++ Q E
Sbjct: 239 VLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQR-------NYLVQTEEQ 291
Query: 113 QVGVQPSLL 121
+ + +LL
Sbjct: 292 YIFIHDALL 300
>pdb|2H4V|A Chain A, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
pdb|2H4V|B Chain B, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
Length = 320
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Query: 58 VLVHCKMGISRSASVVIAYAMKAYNWDLTRA-----MAHVRQKRNCIKPNANFITQLETY 112
VLVHC G+ R+ + ++ +M D + + H+R +R N++ Q E
Sbjct: 249 VLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQR-------NYLVQTEEQ 301
Query: 113 QVGVQPSLL 121
+ + +LL
Sbjct: 302 YIFIHDALL 310
>pdb|3QCM|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
pdb|3QCM|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
Length = 310
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Query: 58 VLVHCKMGISRSASVVIAYAMKAYNWDLTRA-----MAHVRQKRNCIKPNANFITQLETY 112
VLVHC G+ R+ + ++ +M D + + H+R +R N++ Q E
Sbjct: 238 VLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQR-------NYLVQTEEQ 290
Query: 113 QVGVQPSLL 121
+ + +LL
Sbjct: 291 YIFIHDALL 299
>pdb|3QCB|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCB|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCC|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCC|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCD|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Trigonal Crystal Form
pdb|3QCE|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCE|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCF|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCF|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCG|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3-Bromo-4-Chlorobenzyl)sulfanyl]thiophene-2-
Carboxylic Acid
pdb|3QCH|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]-N-(Methylsulfonyl)
Thiophene-2-Carboxamide
pdb|3QCI|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
N-[(3-Aminophenyl)sulfonyl]-3-[(3,4-Dichlorobenzyl)
Sulfanyl]thiophene-2-Carboxamide
pdb|3QCJ|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
5-[({3-[(3,4-Dichlorobenzyl)sulfanyl]thiophen-2-
Yl}carbonyl)sulfamoyl]-2-Methoxybenzoic Acid
pdb|3QCK|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]benzoic Acid
Length = 310
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Query: 58 VLVHCKMGISRSASVVIAYAMKAYNWDLTRA-----MAHVRQKRNCIKPNANFITQLETY 112
VLVHC G+ R+ + ++ +M D + + H+R +R N++ Q E
Sbjct: 238 VLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQR-------NYLVQTEEQ 290
Query: 113 QVGVQPSLL 121
+ + +LL
Sbjct: 291 YIFIHDALL 299
>pdb|3QCL|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-(4-Hydroxybut-1-Yn-1-
Yl)benzoic Acid
pdb|3QCN|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Trigonal Crystal Form
Length = 310
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Query: 58 VLVHCKMGISRSASVVIAYAMKAYNWDLTRA-----MAHVRQKRNCIKPNANFITQLETY 112
VLVHC G+ R+ + ++ +M D + + H+R +R N++ Q E
Sbjct: 238 VLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQR-------NYLVQTEEQ 290
Query: 113 QVGVQPSLL 121
+ + +LL
Sbjct: 291 YIFIHDALL 299
>pdb|2BZL|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase N14 At 1.65 A Resolution
Length = 325
Score = 26.9 bits (58), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 43 NTYKYITSAKNQGSKVLVHCKMGISRSASVVIAYAM 78
+T + KN+ ++VHC G+ R+ ++++ M
Sbjct: 240 HTNSMLEGTKNRHPPIVVHCSAGVGRTGVLILSELM 275
>pdb|3S4O|A Chain A, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
pdb|3S4O|B Chain B, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
Length = 167
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 60 VHCKMGISRSASVVIAYAMKAY-NWDLTRAMAHVRQKRN 97
VHC G+ R A +++A A+ Y N A+A +R+KR
Sbjct: 114 VHCVAGLGR-APILVALALVEYGNVSALDAIALIREKRK 151
>pdb|2CFV|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Receptor Type J
Length = 316
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 33 DKTDLLKHWDNTYKYITSAKNQGSKVLVHCKMGISRSASVV 73
D TDLL ++ + S +LVHC G+ R+ + +
Sbjct: 215 DTTDLLINFRYLVRDYMKQSPPESPILVHCSAGVGRTGTFI 255
>pdb|1YN9|A Chain A, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|B Chain B, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|C Chain C, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
Length = 169
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 36 DLLKHWDNTYKYITSAKNQGSKVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQK 95
+++ + +T K T K G V VHC GI+R+ +V Y M A+ +
Sbjct: 95 SIVQEFIDTVKEFTE-KCPGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAIDRFEKA 153
Query: 96 RNCIKPNANFITQL 109
R N++ L
Sbjct: 154 RGHKIERQNYVQDL 167
>pdb|1Z01|A Chain A, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z01|B Chain B, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z01|C Chain C, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z01|D Chain D, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z01|E Chain E, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z01|F Chain F, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z02|A Chain A, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z02|B Chain B, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z02|C Chain C, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z02|D Chain D, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z02|E Chain E, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z02|F Chain F, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z03|A Chain A, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z03|B Chain B, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z03|C Chain C, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z03|D Chain D, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z03|E Chain E, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z03|F Chain F, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
Length = 446
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 24/61 (39%)
Query: 23 DYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVHCKMGISRSASVVIAYAMKAYN 82
D C V DDD + W T K+ +NQ + V G SVV+ + N
Sbjct: 247 DDCIAVVEDDDGPKGMMQWLFTDKWAPVLENQELGLKVEGLKGRHYRTSVVLPGVLMVEN 306
Query: 83 W 83
W
Sbjct: 307 W 307
>pdb|1I9T|A Chain A, Crystal Structure Of The Oxidized Rna Triphosphatase
Domain Of Mouse Mrna Capping Enzyme
Length = 210
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 60 VHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKR 96
VH G +R+ ++ A+ ++ +W + A+A Q R
Sbjct: 124 VHXTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQAR 160
>pdb|3ECM|A Chain A, Crystal Structure Of The Unliganded Pde8a Catalytic Domain
pdb|3ECN|A Chain A, Crystal Structure Of Pde8a Catalytic Domain In Complex
With Ibmx
pdb|3ECN|B Chain B, Crystal Structure Of Pde8a Catalytic Domain In Complex
With Ibmx
Length = 338
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Query: 14 IDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKY 47
ID F +FD + V D DL++H DN +KY
Sbjct: 301 IDYFITDMFDAWDAFV---DLPDLMQHLDNNFKY 331
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.137 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,563,211
Number of Sequences: 62578
Number of extensions: 128769
Number of successful extensions: 403
Number of sequences better than 100.0: 56
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 355
Number of HSP's gapped (non-prelim): 56
length of query: 123
length of database: 14,973,337
effective HSP length: 85
effective length of query: 38
effective length of database: 9,654,207
effective search space: 366859866
effective search space used: 366859866
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 45 (21.9 bits)