RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy6369
(123 letters)
>gnl|CDD|238073 cd00127, DSPc, Dual specificity phosphatases (DSP); Ser/Thr and Tyr
protein phosphatases. Structurally similar to
tyrosine-specific phosphatases but with a shallower
active site cleft and a distinctive active site
signature motif, HCxxGxxR. Characterized as VHR- or
Cdc25-like.
Length = 139
Score = 127 bits (321), Expect = 5e-39
Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 3 GVCHILNVTREI--DNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLV 60
G+ H+LNV +E+ +N F F+Y + + D D+ K++D +I A+ +G KVLV
Sbjct: 27 GITHVLNVAKEVPNENLFLSDFNYLYVPILDLPSQDISKYFDEAVDFIDDAREKGGKVLV 86
Query: 61 HCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETYQ 113
HC G+SRSA++VIAY MK L A V+ +R I PNA F+ QL+ Y+
Sbjct: 87 HCLAGVSRSATLVIAYLMKTLGLSLREAYEFVKSRRPIISPNAGFMRQLKEYE 139
>gnl|CDD|214551 smart00195, DSPc, Dual specificity phosphatase, catalytic domain.
Length = 138
Score = 127 bits (320), Expect = 6e-39
Identities = 41/107 (38%), Positives = 66/107 (61%)
Query: 3 GVCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVHC 62
G+ H++NVT E+ N+ F Y + + D+ +T + ++ ++I A+++G KVLVHC
Sbjct: 26 GITHVINVTNEVPNYNGSDFTYLGVPIDDNTETKISPYFPEAVEFIEDAESKGGKVLVHC 85
Query: 63 KMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQL 109
+ G+SRSA+++IAY MK N L A V+ +R I PN F+ QL
Sbjct: 86 QAGVSRSATLIIAYLMKTRNMSLNDAYDFVKDRRPIISPNFGFLRQL 132
>gnl|CDD|216117 pfam00782, DSPc, Dual specificity phosphatase, catalytic domain.
Ser/Thr and Tyr protein phosphatases. The enzyme's
tertiary fold is highly similar to that of
tyrosine-specific phosphatases, except for a
"recognition" region.
Length = 131
Score = 113 bits (285), Expect = 1e-33
Identities = 46/113 (40%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 3 GVCHILNVTREIDNF-FPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVH 61
G+ H++NVTRE+ N Y I V D+ +T++ K+ ++I A +G KVLVH
Sbjct: 18 GITHVINVTREVPNSNLNSGILYLGIPVEDNHETNISKYLPEAVEFIDDAIQKGGKVLVH 77
Query: 62 CKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETYQV 114
C+ GISRSA+++IAY MK N L A + V+++R I PN F QL Y+
Sbjct: 78 CQAGISRSATLIIAYLMKTRNLSLNEAYSFVKERRPIISPNFGFKRQLLEYER 130
>gnl|CDD|225297 COG2453, CDC14, Predicted protein-tyrosine phosphatase [Signal
transduction mechanisms].
Length = 180
Score = 60.5 bits (147), Expect = 1e-12
Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 12/100 (12%)
Query: 14 IDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVHCKMGISRSASVV 73
I I D V D L+ D +I A ++G KV+VHC+ GI RS +V+
Sbjct: 73 IQVLHLPILDGT---VPD------LEDLDKIVDFIEEALSKGKKVVVHCQGGIGRSGTVI 123
Query: 74 IAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETYQ 113
AY M L+ A + KR +P A ++
Sbjct: 124 AAYLMLYGG--LSLADEAIAVKR-RRRPGAVVTEIQHLFE 160
>gnl|CDD|183473 PRK12361, PRK12361, hypothetical protein; Provisional.
Length = 547
Score = 41.1 bits (97), Expect = 3e-05
Identities = 35/134 (26%), Positives = 51/134 (38%), Gaps = 26/134 (19%)
Query: 7 ILNVTREIDNF----FPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQ-------G 55
IL+VT E D DY NI + D H T + A N
Sbjct: 124 ILDVTAEFDGLDWSLTEEDIDYLNIPILD--------HSVPTLAQLNQAINWIHRQVRAN 175
Query: 56 SKVLVHCKMGISRSASVVIAYAMKAYNWDLT--RAMAHVRQKRNCIKPNANFITQLETY- 112
V+VHC +G RS V+ AY + + DLT + ++Q R + N + LE
Sbjct: 176 KSVVVHCALGRGRSVLVLAAYLL-CKDPDLTVEEVLQQIKQIRKTARLNKRQLRALEKML 234
Query: 113 ---QVGVQPSLLLI 123
++ + LI
Sbjct: 235 EQGKLNIHKRAWLI 248
>gnl|CDD|227653 COG5350, COG5350, Predicted protein tyrosine phosphatase [General
function prediction only].
Length = 172
Score = 37.5 bits (87), Expect = 5e-04
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 58 VLVHCKMGISRS-ASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFI 106
+L+HC GISRS A+ +IA A + D T +R PN I
Sbjct: 96 LLIHCYAGISRSTAAALIAALALAPDMDETELAERLRALSPYATPNPRLI 145
>gnl|CDD|214649 smart00404, PTPc_motif, Protein tyrosine phosphatase, catalytic
domain motif.
Length = 105
Score = 31.9 bits (73), Expect = 0.021
Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 6/54 (11%)
Query: 50 SAKNQGSKVLVHCKMGISRSASVVIAYAM------KAYNWDLTRAMAHVRQKRN 97
+ V+VHC G+ R+ + V + +A D+ + +R +R
Sbjct: 34 NQSESSGPVVVHCSAGVGRTGTFVAIDILLQQLEAEAGEVDIFDTVKELRSQRP 87
>gnl|CDD|214469 smart00012, PTPc_DSPc, Protein tyrosine phosphatase, catalytic
domain, undefined specificity. Protein tyrosine
phosphatases. Homologues detected by this profile and
not by those of "PTPc" or "DSPc" are predicted to be
protein phosphatases with a similar fold to DSPs and
PTPs, yet with unpredicted specificities.
Length = 105
Score = 31.9 bits (73), Expect = 0.021
Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 6/54 (11%)
Query: 50 SAKNQGSKVLVHCKMGISRSASVVIAYAM------KAYNWDLTRAMAHVRQKRN 97
+ V+VHC G+ R+ + V + +A D+ + +R +R
Sbjct: 34 NQSESSGPVVVHCSAGVGRTGTFVAIDILLQQLEAEAGEVDIFDTVKELRSQRP 87
>gnl|CDD|193531 cd05654, M20_ArgE_RocB, M20 Peptidase Arginine utilization protein,
RocB. Peptidase M20 family, ArgE RocB (Arginine
utilization protein, RocB; arginine degradation protein,
RocB) subfamily. This group of proteins is possibly
related to acetylornithine deacetylase (ArgE) and may be
involved in the arginine and/or ornithine degradation
pathway. In Bacillus subtilis, RocB is one of the three
genes found in the rocABC operon, which is sigma L
dependent and induced by arginine. The function of
members of this family is as yet unknown, although they
are predicted as deacetylases.
Length = 535
Score = 29.1 bits (66), Expect = 0.55
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 5/42 (11%)
Query: 9 NVTREIDNFFPGIFD--YCNIRVYDDDKTDLLKH---WDNTY 45
T ++ ++FPGI D Y + + L + W Y
Sbjct: 442 GETLKVKHYFPGISDLSYLGLDDDLEGIESLKDNMPGWGKLY 483
>gnl|CDD|217942 pfam04179, Init_tRNA_PT, Initiator tRNA phosphoribosyl transferase.
This enzyme (EC:2.4.2.-) modifies exclusively the
initiator tRNA in position 64 using
5'-phosphoribosyl-1'-pyrophosphate as the modification
donor. As the initiator tRNA participates both in the
initiation and elongation of translation, the
2'-O-ribosyl phosphate modification discriminates the
initiator tRNAs from the elongator tRNAs.
Length = 441
Score = 28.1 bits (63), Expect = 1.3
Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 9/73 (12%)
Query: 51 AKNQGSKVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQ-- 108
+ + K+LV C G S V +A ++ D + N +FI Q
Sbjct: 362 SSDPSKKILVACDSGKDLSVGVALAILCLYFDLD-----GKLLPSPEKRSINKDFIRQRL 416
Query: 109 --LETYQVGVQPS 119
+ + V PS
Sbjct: 417 AKIISSLPNVNPS 429
>gnl|CDD|215717 pfam00102, Y_phosphatase, Protein-tyrosine phosphatase.
Length = 233
Score = 27.3 bits (61), Expect = 1.8
Identities = 7/30 (23%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 50 SAKNQGSKVLVHCKMGISRSAS-VVIAYAM 78
A + ++VHC G+ R+ + + I +
Sbjct: 163 QADPRSGPIVVHCSAGVGRTGTFIAIDILL 192
>gnl|CDD|217409 pfam03178, CPSF_A, CPSF A subunit region. This family includes a
region that lies towards the C-terminus of the cleavage
and polyadenylation specificity factor (CPSF) A (160
kDa) subunit. CPSF is involved in mRNA polyadenylation
and binds the AAUAAA conserved sequence in pre-mRNA.
CPSF has also been found to be necessary for splicing of
single-intron pre-mRNAs. The function of the aligned
region is unknown but may be involved in RNA/DNA
binding.
Length = 318
Score = 27.2 bits (61), Expect = 2.0
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 26 NIRVYDDDKTDLLKH--WDNTYKYITSAKNQGSKVLV 60
+RVYD K LL D Y+ S K G++++V
Sbjct: 106 KLRVYDLGKDKLLPKAFLDTPITYVVSLKVFGNRIIV 142
>gnl|CDD|180967 PRK07411, PRK07411, hypothetical protein; Validated.
Length = 390
Score = 27.4 bits (61), Expect = 2.2
Identities = 9/17 (52%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Query: 54 QGSKVLVHCKMGISRSA 70
G +++ HCKMG RSA
Sbjct: 341 NGHRLIAHCKMG-GRSA 356
>gnl|CDD|225240 COG2365, COG2365, Protein tyrosine/serine phosphatase [Signal
transduction mechanisms].
Length = 249
Score = 27.0 bits (60), Expect = 2.3
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 58 VLVHCKMGISRSASVVIAYAMKAYNWDLTRAM 89
VL+HC G R+ V Y D T A
Sbjct: 139 VLIHCTAGKDRTGLVAALYRKLVGGSDETVAA 170
>gnl|CDD|111998 pfam03162, Y_phosphatase2, Tyrosine phosphatase family. This
family is closely related to the pfam00102 and pfam00782
families.
Length = 150
Score = 26.9 bits (60), Expect = 2.5
Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Query: 43 NTYKYITSAKNQGSKVLVHCKMGISRSASVVIAYAMKAYNWDLT 86
K + + N VL+HC G R+ +VI K W L
Sbjct: 81 RALKLLLNKDNY--PVLIHCNRGKHRTG-LVIGCLRKLQKWSLA 121
>gnl|CDD|224473 COG1556, COG1556, Uncharacterized conserved protein [Function
unknown].
Length = 218
Score = 26.6 bits (59), Expect = 3.2
Identities = 6/34 (17%), Positives = 13/34 (38%)
Query: 41 WDNTYKYITSAKNQGSKVLVHCKMGISRSASVVI 74
WD Q + + GI+ + ++V+
Sbjct: 103 WDEIEDENIEQAEQADVGITGAEYGIAETGTIVL 136
>gnl|CDD|238006 cd00047, PTPc, Protein tyrosine phosphatases (PTP) catalyze the
dephosphorylation of phosphotyrosine peptides; they
regulate phosphotyrosine levels in signal transduction
pathways. The depth of the active site cleft renders the
enzyme specific for phosphorylated Tyr (pTyr) residues,
instead of pSer or pThr. This family has a distinctive
active site signature motif, HCSAGxGRxG. Characterized
as either transmembrane, receptor-like or
non-transmembrane (soluble) PTPs. Receptor-like PTP
domains tend to occur in two copies in the cytoplasmic
region of the transmembrane proteins, only one copy may
be active.
Length = 231
Score = 26.8 bits (60), Expect = 3.4
Identities = 12/74 (16%), Positives = 30/74 (40%), Gaps = 11/74 (14%)
Query: 32 DDKTDLLKHWDNTYKYITSAKNQGSK--VLVHCKMGISRSASVVIAYAM----KAYNW-D 84
+ LL + + ++ Q ++VHC G+ R+ + + + +A D
Sbjct: 145 ESPDSLLDL----LRKVRKSQQQPGSGPIVVHCSAGVGRTGTFIAIDILLQRLEAEGVVD 200
Query: 85 LTRAMAHVRQKRNC 98
+ + + +R +R
Sbjct: 201 IFQTVKELRSQRPG 214
>gnl|CDD|165109 PHA02742, PHA02742, protein tyrosine phosphatase; Provisional.
Length = 303
Score = 26.5 bits (58), Expect = 4.1
Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 8/77 (10%)
Query: 38 LKHWDNTYKYITSAKN--QGSKVLVHCKMGISRS-ASVVIAYAMKAYNWDLTRAMAHV-- 92
++ D +N + +LVHC G+ R+ A I + YN + +
Sbjct: 210 VREADLKADVDIKGENIVKEPPILVHCSAGLDRAGAFCAIDICISKYNERAIIPLLSIVR 269
Query: 93 ---RQKRNCIKPNANFI 106
+Q+ NC+ +I
Sbjct: 270 DLRKQRHNCLSLPQQYI 286
>gnl|CDD|214550 smart00194, PTPc, Protein tyrosine phosphatase, catalytic domain.
Length = 259
Score = 26.5 bits (59), Expect = 4.4
Identities = 6/22 (27%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Query: 58 VLVHCKMGISRSAS-VVIAYAM 78
++VHC G+ R+ + + I +
Sbjct: 197 IVVHCSAGVGRTGTFIAIDILL 218
>gnl|CDD|240323 PTZ00233, PTZ00233, variable surface protein Vir18; Provisional.
Length = 509
Score = 26.5 bits (58), Expect = 4.6
Identities = 9/35 (25%), Positives = 11/35 (31%), Gaps = 4/35 (11%)
Query: 28 RVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVHC 62
T++ WD KYI L HC
Sbjct: 40 DFNKATHTNIYTQWDQLNKYI----ITKDAELKHC 70
>gnl|CDD|180433 PRK06157, PRK06157, acetyl-CoA acetyltransferase; Validated.
Length = 398
Score = 26.1 bits (58), Expect = 5.3
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Query: 70 ASVVIAYAMKAYNW---DLTRAMAHVRQK 95
A + AYA K Y DL RAMAHV K
Sbjct: 149 AQLASAYAAK-YGVSREDLKRAMAHVSVK 176
>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8
member A1-like. In humans, the aldehyde dehydrogenase
family 8 member A1 (ALDH8A1) protein functions to
convert 9-cis-retinal to 9-cis-retinoic acid and has a
preference for NAD+. Also included in this CD is the
2-hydroxymuconic semialdehyde dehydrogenase (HMSADH)
which catalyzes the conversion of 2-hydroxymuconic
semialdehyde to 4-oxalocrotonate, a step in the meta
cleavage pathway of aromatic hydrocarbons in bacteria.
Such HMSADHs seen here are: XylG of the TOL plasmid pWW0
of Pseudomonas putida, TomC of Burkholderia cepacia G4,
and AphC of Comamonas testosterone.
Length = 455
Score = 26.0 bits (58), Expect = 6.2
Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 7/42 (16%)
Query: 26 NIRVYD--DDKTDL-----LKHWDNTYKYITSAKNQGSKVLV 60
++V D D T++ +H + Y+ A+ +G+ +L
Sbjct: 286 ALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILT 327
>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family.
The aldehyde dehydrogenase family (ALDH) of NAD(P)+
dependent enzymes, in general, oxidize a wide range of
endogenous and exogenous aliphatic and aromatic
aldehydes to their corresponding carboxylic acids and
play an important role in detoxification. Besides
aldehyde detoxification, many ALDH isozymes possess
multiple additional catalytic and non-catalytic
functions such as participating in metabolic pathways,
or as binding proteins, or as osmoregulants, to mention
a few. The enzyme has three domains, a NAD(P)+
cofactor-binding domain, a catalytic domain, and a
bridging domain; and the active enzyme is generally
either homodimeric or homotetrameric. The catalytic
mechanism is proposed to involve cofactor binding,
resulting in a conformational change and activation of
an invariant catalytic cysteine nucleophile. The
cysteine and aldehyde substrate form an oxyanion
thiohemiacetal intermediate resulting in hydride
transfer to the cofactor and formation of a
thioacylenzyme intermediate. Hydrolysis of the
thioacylenzyme and release of the carboxylic acid
product occurs, and in most cases, the reduced cofactor
dissociates from the enzyme. The evolutionary
phylogenetic tree of ALDHs appears to have an initial
bifurcation between what has been characterized as the
classical aldehyde dehydrogenases, the ALDH family
(ALDH) and extended family members or aldehyde
dehydrogenase-like (ALDH-like) proteins. The ALDH
proteins are represented by enzymes which share a number
of highly conserved residues necessary for catalysis and
cofactor binding and they include such proteins as
retinal dehydrogenase, 10-formyltetrahydrofolate
dehydrogenase, non-phosphorylating glyceraldehyde
3-phosphate dehydrogenase,
delta(1)-pyrroline-5-carboxylate dehydrogenases,
alpha-ketoglutaric semialdehyde dehydrogenase,
alpha-aminoadipic semialdehyde dehydrogenase, coniferyl
aldehyde dehydrogenase and succinate-semialdehyde
dehydrogenase. Included in this larger group are all
human, Arabidopsis, Tortula, fungal, protozoan, and
Drosophila ALDHs identified in families ALDH1 through
ALDH22 with the exception of families ALDH18, ALDH19,
and ALDH20 which are present in the ALDH-like group.
Length = 432
Score = 25.6 bits (57), Expect = 7.2
Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 11/58 (18%)
Query: 26 NIRVYD--DDKTDLL-----KHWDNTYKYITSAKNQGSKVLVHCKMGISRSASVVIAY 76
++V + D TD+ D YI AK +G+K+L G R +
Sbjct: 265 ALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLC----GGKRLEGGKGYF 318
>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family. This family of
dehydrogenases act on aldehyde substrates. Members use
NADP as a cofactor. The family includes the following
members: The prototypical members are the aldehyde
dehydrogenases EC:1.2.1.3. Succinate-semialdehyde
dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase
EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28.
Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27.
Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9.
Delta-1-pyrroline-5-carboxylate dehydrogenase EC:
1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10.
Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This
family also includes omega crystallin, an eye lens
protein from squid and octopus that has little aldehyde
dehydrogenase activity.
Length = 459
Score = 25.6 bits (57), Expect = 7.5
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Query: 26 NIRVYD--DDKTDL-----LKHWDNTYKYITSAKNQGSKVLV 60
+++V D D TD+ K + YI AK +G+K+L
Sbjct: 295 SLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLC 336
>gnl|CDD|233469 TIGR01564, S_layer_MJ, S-layer protein, MJ0822 family. This model
represents one of several families of proteins
associated with the formation of prokaryotic S-layers.
Members of this family are found in archaeal species,
including Pyrococcus horikoshii (split into two tandem
reading frames), Methanococcus jannaschii, and related
species. Some local similarity can be found to other
S-layer protein families [Cell envelope, Surface
structures].
Length = 571
Score = 25.7 bits (56), Expect = 8.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 20 GIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKV 58
GI +Y +++ D+DK D L + +Y + +G KV
Sbjct: 426 GIIEYAVLKLDDEDKEDKLYIDFSMDEYKDATLTKGDKV 464
>gnl|CDD|129795 TIGR00712, glpT, glycerol-3-phosphate transporter. This model
describes a very hydrophobic protein, predicted to span
the membrane at least 8 times. The two members confirmed
experimentally as glycerol-3-phosphate transporters,
from E. coli and B. subtilis, share more than 50 % amino
acid identity. Proteins of the hexose phosphate and
phosphoglycerate transport systems are also quite
similar [Transport and binding proteins, Other].
Length = 438
Score = 25.6 bits (56), Expect = 9.4
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 64 MGISRSASVVIAYAMKAYNWD 84
+G S +AS ++ Y + + WD
Sbjct: 392 LGGSVAASAIVGYTVDFFGWD 412
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.324 0.137 0.427
Gapped
Lambda K H
0.267 0.0705 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 5,988,631
Number of extensions: 484500
Number of successful extensions: 533
Number of sequences better than 10.0: 1
Number of HSP's gapped: 531
Number of HSP's successfully gapped: 33
Length of query: 123
Length of database: 10,937,602
Length adjustment: 85
Effective length of query: 38
Effective length of database: 7,167,512
Effective search space: 272365456
Effective search space used: 272365456
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 53 (24.2 bits)