RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6369
(123 letters)
>d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1
[TaxId: 9606]}
Length = 145
Score = 99.0 bits (246), Expect = 2e-28
Identities = 40/111 (36%), Positives = 63/111 (56%)
Query: 3 GVCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLVHC 62
G+ +LNV+ N F G+F Y +I V D+ ++ + +I KN G +VLVH
Sbjct: 29 GITAVLNVSASCPNHFEGLFRYKSIPVEDNQMVEISAWFQEAIGFIDWVKNSGGRVLVHS 88
Query: 63 KMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETYQ 113
+ GISRSA++ +AY M++ L A V+Q+R I PN +F+ QL ++
Sbjct: 89 QAGISRSATICLAYLMQSRRVRLDEAFDFVKQRRGVISPNFSFMGQLLQFE 139
>d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1
(mkp3) [TaxId: 9606]}
Length = 144
Score = 91.8 bits (227), Expect = 1e-25
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 3 GVCHILNVTREIDNFF--PGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKNQGSKVLV 60
G+ +ILNVT + N F G F Y I + D +L + + +I A+ + VLV
Sbjct: 29 GIKYILNVTPNLPNLFENAGEFKYKQIPISDHWSQNLSQFFPEAISFIDEARGKNCGVLV 88
Query: 61 HCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETYQ 113
H GISRS +V +AY M+ N + A V+ K++ I PN NF+ QL ++
Sbjct: 89 HSLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISPNFNFMGQLLDFE 141
>d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR
{Human (Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 86.0 bits (212), Expect = 6e-23
Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 11/121 (9%)
Query: 3 GVCHILNVTRE---------IDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKN 53
G+ H+LN + + Y I+ D + +L +++ +I A
Sbjct: 48 GITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALA 107
Query: 54 QGS-KVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETY 112
Q + +VLVHC+ G SRS ++VIAY M D+ A++ VRQ R I PN F+ QL
Sbjct: 108 QKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNR-EIGPNDGFLAQLCQL 166
Query: 113 Q 113
Sbjct: 167 N 167
>d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 194
Score = 80.1 bits (197), Expect = 2e-20
Identities = 14/117 (11%), Positives = 45/117 (38%), Gaps = 7/117 (5%)
Query: 3 GVCHILNVTRE-----IDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITS--AKNQG 55
+ ++++T ++ Y ++ + ++ + + ++
Sbjct: 56 KMSLLVDLTNTSRFYDRNDIEKEGIKYIKLQCKGHGECPTTENTETFIRLCERFNERSPP 115
Query: 56 SKVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQLETY 112
+ VHC G +R+ ++ A+ ++ +W + A+A Q R +++ +L
Sbjct: 116 ELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARPPGIYKGDYLKELFRR 172
>d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 182
Score = 68.5 bits (167), Expect = 3e-16
Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 5/113 (4%)
Query: 3 GVCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNT-YKYITSAKNQGSKVLVH 61
V I+ + + + + F +D D D +++ +N + VH
Sbjct: 58 NVTTIIRLNKRM--YDAKRFTDAGFDHHDLFFADGSTPTDAIVKEFLDICENAEGAIAVH 115
Query: 62 CKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRN--CIKPNANFITQLETY 112
K G+ R+ +++ Y MK Y +A VR R I P F+ +T
Sbjct: 116 SKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQQFLVMKQTN 168
>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 176
Score = 57.4 bits (138), Expect = 6e-12
Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 11/106 (10%)
Query: 3 GVCHILNVT--REIDNF----FPGIFDYCNIRVYD----DDKTDLLKHWDNTYKYITSAK 52
G+ I E+ + ++ C I + D T + + +T+
Sbjct: 47 GIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADGGTPDIASCCEIMEELTTCL 106
Query: 53 NQGSKVLVHCKMGISRSASVVIAYAMKAY-NWDLTRAMAHVRQKRN 97
K L+H G+ RS V + +A+ +R R
Sbjct: 107 KNYRKTLIHSYGGLGRSCLVAACLLLYLSDTISPEQAIDSLRDLRG 152
>d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten
(Pten tumor suppressor), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 174
Score = 50.8 bits (121), Expect = 2e-09
Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 22/126 (17%)
Query: 6 HILNVTREIDNFFPG---IFDYCNIRVYDDDK-----------------TDLLKHWDNTY 45
+I +V R +D+ I++ C R YD K +L+K +
Sbjct: 36 NIDDVVRFLDSKHKNHYKIYNLCAERHYDTAKFNCRVAQYPFEDHNPPQLELIKPFCEDL 95
Query: 46 KYITSAKNQGSKVLVHCKMGISRSASVVIAYAMKAYNW-DLTRAMAHVRQKRNCIKPNAN 104
S ++ +HCK G R+ ++ AY + + A+ + R K
Sbjct: 96 DQWLS-EDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEALDFYGEVRTRDKKGVT 154
Query: 105 FITQLE 110
+Q
Sbjct: 155 IPSQRR 160
>d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human
(Homo sapiens), pr-1 [TaxId: 9606]}
Length = 152
Score = 45.1 bits (106), Expect = 1e-07
Identities = 20/118 (16%), Positives = 37/118 (31%), Gaps = 15/118 (12%)
Query: 3 GVCHILNVTREIDNFFPGIFDYCNIRVYDDDKTD--------LLKHWDNTYKYITSAKNQ 54
GV I+ V + + + I V D D + +
Sbjct: 33 GVTTIVRVCEA--TYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKF--REEP 88
Query: 55 GSKVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNC--IKPNANFITQLE 110
G + VHC G+ R+ +V ++ A+ +RQKR ++ +
Sbjct: 89 GCCIAVHCVAGLGRAPVLVALALIE-GGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYR 145
>d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 151
Score = 36.7 bits (84), Expect = 2e-04
Identities = 20/121 (16%), Positives = 36/121 (29%), Gaps = 13/121 (10%)
Query: 3 GVCHILNV-TREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYK------YITSAKNQG 55
G+ I+ + IR++ + + N +
Sbjct: 33 GLRSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGNKEPFVNIPDHKIRMALKVLLDEKN 92
Query: 56 SKVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKRNCIKPNANFITQ--LETYQ 113
VL+HCK G R+ ++ K W LT ++ A Q +E +
Sbjct: 93 HPVLIHCKRGKHRT-GCLVGCLRKLQKWCLTSIFDEYQRFAA---AKARVSDQRFMEIFD 148
Query: 114 V 114
V
Sbjct: 149 V 149
>d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate
phosphohydrolase (phytase) PhyA {Selenomonas ruminantium
[TaxId: 971]}
Length = 313
Score = 33.5 bits (76), Expect = 0.004
Identities = 9/66 (13%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Query: 53 NQGSKVLVHCKMGISRSASVVIAYAM-KAYNWDLTRAMAHVRQKRNCIKPNANFITQLET 111
Q + + HC+ G+ R+ + ++ M K + L + + T+ +
Sbjct: 210 PQDAWLHFHCEAGVGRTTAFMVMTDMLKNPSVSLKDILYRQHEIGGFYYGEFPIKTKDKD 269
Query: 112 YQVGVQ 117
Sbjct: 270 SWKTKY 275
>d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human
(Homo sapiens) [TaxId: 9606]}
Length = 41
Score = 26.9 bits (60), Expect = 0.12
Identities = 8/26 (30%), Positives = 12/26 (46%), Gaps = 3/26 (11%)
Query: 64 MGISRSASVVIAYAMKAYNWDLTRAM 89
MG R V A++A + RA+
Sbjct: 14 MGYERERVVA---ALRASYNNPHRAV 36
>d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 73
Score = 25.2 bits (55), Expect = 1.0
Identities = 6/26 (23%), Positives = 11/26 (42%), Gaps = 3/26 (11%)
Query: 64 MGISRSASVVIAYAMKAYNWDLTRAM 89
G + + A+KA D+ +A
Sbjct: 39 FGFAEDVAR---KALKASGGDIEKAT 61
>d1te5a_ d.153.1.1 (A:) Hypothetical protein YafJ (PA1307)
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 253
Score = 25.6 bits (55), Expect = 1.8
Identities = 8/74 (10%), Positives = 17/74 (22%), Gaps = 5/74 (6%)
Query: 23 DYCNIRVYDDDKTDLLKH-----WDNTYKYITSAKNQGSKVLVHCKMGISRSASVVIAYA 77
D I Y+ L + + + + V+ H + + +
Sbjct: 33 DGWGIAFYEGRGVRLFQDPLASVDSEVARLVQRFPIKSETVIGHIRQANVGKVGLSNTHP 92
Query: 78 MKAYNWDLTRAMAH 91
AH
Sbjct: 93 FIRELGGRYWTFAH 106
>d1pn0a2 c.47.1.10 (A:462-662) Phenol hydroxylase, C-terminal domain
{Soil-living yeast (Trichosporon cutaneum) [TaxId:
5554]}
Length = 201
Score = 25.3 bits (55), Expect = 1.8
Identities = 9/82 (10%), Positives = 21/82 (25%), Gaps = 8/82 (9%)
Query: 1 MDGVCHILNVTREIDNFFPGIFDYC--------NIRVYDDDKTDLLKHWDNTYKYITSAK 52
+D +++ D +I ++D L W + Y
Sbjct: 74 LDSENSVISRYTPKGADRNSRIDVITIHSCHRDDIEMHDFPAPALHPKWQYDFIYADCDS 133
Query: 53 NQGSKVLVHCKMGISRSASVVI 74
+ G+ + V+
Sbjct: 134 WHHPHPKSYQAWGVDETKGAVV 155
>d1lyva_ c.45.1.2 (A:) Protein-tyrosine phosphatase YopH, catalytic
domain {Yersinia enterocolitica [TaxId: 630]}
Length = 283
Score = 25.5 bits (55), Expect = 2.2
Identities = 8/65 (12%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Query: 36 DLLKHWDNTYKYITSAKNQGSKVLVHCKMGISRSASVV---IAYAMKAYNWDLTRAMAHV 92
+ ++ + A + + ++H + G+ R+A ++ + + ++ +
Sbjct: 192 ETKRNMYESKGSSAVADDSKLRPVIHSRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQM 251
Query: 93 RQKRN 97
R +RN
Sbjct: 252 RVQRN 256
>d1xsza2 d.129.9.1 (A:198-354) RalF, C-terminal domain {Legionella
pneumophila [TaxId: 446]}
Length = 157
Score = 25.0 bits (54), Expect = 2.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 30 YDDDKTDLLKHWDNTYKYITSAKN 53
YD + DL+K +DN K IT +N
Sbjct: 129 YDYEVGDLIKAYDNQKKLITIERN 152
>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase
{Azoarcus sp. ebn1 [TaxId: 76114]}
Length = 247
Score = 25.2 bits (55), Expect = 2.5
Identities = 12/55 (21%), Positives = 18/55 (32%), Gaps = 4/55 (7%)
Query: 51 AKNQGSKVLVHCKMGISRSASVVIAYAMKAYNWDLTRAMAHVRQKR----NCIKP 101
G + + + + + KA N TRA+A K N I P
Sbjct: 128 RNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAP 182
>d2shpa1 c.45.1.2 (A:219-525) Tyrosine phosphatase {Human (Homo
sapiens), shp-2 [TaxId: 9606]}
Length = 307
Score = 24.8 bits (53), Expect = 3.1
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Query: 32 DDKTDLLKHWDNTYKYITSAKNQGSKVLVHCKMGISRSAS-VVIAYAM-------KAYNW 83
D +L + + S + G V+VHC GI R+ + +VI + +
Sbjct: 212 SDPGGVLDFLEEVHHKQESIMDAGP-VVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDI 270
Query: 84 DLTRAMAHVRQKRN 97
D+ + + VR +R+
Sbjct: 271 DVPKTIQMVRSQRS 284
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase
{Escherichia coli [TaxId: 562]}
Length = 330
Score = 24.8 bits (53), Expect = 3.9
Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 4/61 (6%)
Query: 50 SAKNQGSKVLVHCKMGISRSASVV----IAYAMKAYNWDLTRAMAHVRQKRNCIKPNANF 105
G + K+ +RS +V I A+ + D + K + + +
Sbjct: 25 QISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDA 84
Query: 106 I 106
I
Sbjct: 85 I 85
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 336
Score = 23.6 bits (49), Expect = 9.3
Identities = 5/23 (21%), Positives = 11/23 (47%)
Query: 50 SAKNQGSKVLVHCKMGISRSASV 72
+ + +G +V + + RS S
Sbjct: 23 ATQQKGLSTIVLSLIPVKRSHSA 45
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.324 0.137 0.427
Gapped
Lambda K H
0.267 0.0471 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 470,200
Number of extensions: 18579
Number of successful extensions: 102
Number of sequences better than 10.0: 1
Number of HSP's gapped: 98
Number of HSP's successfully gapped: 27
Length of query: 123
Length of database: 2,407,596
Length adjustment: 75
Effective length of query: 48
Effective length of database: 1,377,846
Effective search space: 66136608
Effective search space used: 66136608
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.5 bits)