Query psy6373
Match_columns 199
No_of_seqs 161 out of 475
Neff 3.6
Searched_HMMs 46136
Date Sat Aug 17 00:50:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6373.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6373hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3736|consensus 100.0 9.3E-50 2E-54 379.5 4.8 118 1-119 309-426 (578)
2 KOG3738|consensus 100.0 1.4E-47 3.1E-52 355.5 3.2 118 1-118 287-404 (559)
3 KOG3737|consensus 100.0 1.3E-41 2.9E-46 316.1 4.0 118 1-118 327-448 (603)
4 cd02510 pp-GalNAc-T pp-GalNAc- 99.9 2.1E-27 4.5E-32 200.9 7.3 117 1-118 165-282 (299)
5 PF02709 Glyco_transf_7C: N-te 99.5 3.7E-14 8E-19 104.1 3.4 61 3-63 15-76 (78)
6 PF10111 Glyco_tranf_2_2: Glyc 99.2 2.6E-11 5.6E-16 103.9 5.7 87 5-99 166-252 (281)
7 cd00899 b4GalT Beta-4-Galactos 99.0 7.6E-10 1.7E-14 95.8 5.7 63 5-67 109-173 (219)
8 cd06420 GT2_Chondriotin_Pol_N 98.9 1.6E-09 3.5E-14 83.0 5.3 57 6-62 125-182 (182)
9 COG1216 Predicted glycosyltran 98.8 4.1E-09 8.8E-14 91.0 4.6 59 6-65 166-224 (305)
10 TIGR01556 rhamnosyltran L-rham 98.7 3E-08 6.6E-13 83.1 5.8 51 12-63 153-203 (281)
11 cd04186 GT_2_like_c Subfamily 98.6 4.3E-08 9.2E-13 72.7 4.5 54 7-61 112-165 (166)
12 cd02526 GT2_RfbF_like RfbF is 98.6 6.2E-08 1.3E-12 77.4 5.4 58 5-63 149-206 (237)
13 PF13641 Glyco_tranf_2_3: Glyc 98.4 3.4E-07 7.4E-12 73.0 5.4 57 4-63 156-212 (228)
14 cd02525 Succinoglycan_BP_ExoA 98.4 6.4E-07 1.4E-11 71.3 5.1 57 6-64 155-211 (249)
15 cd06435 CESA_NdvC_like NdvC_li 98.3 7.6E-07 1.6E-11 71.6 4.3 54 5-61 156-209 (236)
16 cd04185 GT_2_like_b Subfamily 98.2 1.7E-06 3.7E-11 68.0 4.9 55 9-65 123-177 (202)
17 PF13632 Glyco_trans_2_3: Glyc 98.2 2.3E-06 5E-11 67.4 5.4 57 3-61 68-124 (193)
18 cd04184 GT2_RfbC_Mx_like Myxoc 98.2 1.3E-06 2.9E-11 68.0 3.3 50 7-58 149-198 (202)
19 cd02522 GT_2_like_a GT_2_like_ 98.1 7.1E-06 1.5E-10 64.8 6.2 48 9-60 138-185 (221)
20 cd02520 Glucosylceramide_synth 98.0 2.8E-06 6.1E-11 67.6 2.3 55 7-62 124-178 (196)
21 cd06421 CESA_CelA_like CESA_Ce 98.0 7.5E-06 1.6E-10 65.0 4.6 55 4-61 157-211 (234)
22 cd06437 CESA_CaSu_A2 Cellulose 98.0 6E-06 1.3E-10 66.8 3.4 55 7-64 162-216 (232)
23 PRK11204 N-glycosyltransferase 97.9 2.2E-05 4.8E-10 69.9 5.4 57 5-64 207-263 (420)
24 cd04192 GT_2_like_e Subfamily 97.8 2.7E-05 5.8E-10 61.2 5.0 53 6-59 154-209 (229)
25 cd06433 GT_2_WfgS_like WfgS an 97.8 1.8E-05 3.9E-10 60.3 3.6 57 5-63 140-196 (202)
26 cd06913 beta3GnTL1_like Beta 1 97.7 4.2E-05 9.2E-10 61.3 4.7 53 10-63 159-211 (219)
27 cd06427 CESA_like_2 CESA_like_ 97.7 2.4E-05 5.1E-10 64.2 2.1 49 7-58 161-209 (241)
28 PRK14583 hmsR N-glycosyltransf 97.6 0.00012 2.5E-09 67.0 5.9 56 4-62 227-282 (444)
29 TIGR03469 HonB hopene-associat 97.4 0.00019 4E-09 64.5 4.2 53 5-58 207-259 (384)
30 TIGR03472 HpnI hopanoid biosyn 97.3 9.9E-05 2.2E-09 65.9 2.2 54 7-61 200-253 (373)
31 cd06442 DPM1_like DPM1_like re 97.3 0.00021 4.5E-09 56.5 3.3 56 4-62 148-204 (224)
32 KOG3588|consensus 97.2 0.00031 6.8E-09 66.7 3.3 56 10-65 386-441 (494)
33 TIGR03111 glyc2_xrt_Gpos1 puta 97.1 0.00039 8.5E-09 63.7 3.1 55 5-62 213-268 (439)
34 KOG3916|consensus 97.0 0.00075 1.6E-08 63.0 4.6 87 6-99 259-351 (372)
35 PF13712 Glyco_tranf_2_5: Glyc 96.8 0.0016 3.5E-08 55.2 4.2 73 4-89 144-217 (217)
36 PF13506 Glyco_transf_21: Glyc 96.5 0.0021 4.6E-08 52.5 2.8 55 3-58 97-151 (175)
37 COG1215 Glycosyltransferases, 96.3 0.0054 1.2E-07 54.0 4.7 52 4-58 211-262 (439)
38 PLN02726 dolichyl-phosphate be 96.2 0.0053 1.2E-07 50.7 3.9 58 4-63 163-220 (243)
39 PRK11498 bcsA cellulose syntha 96.1 0.0077 1.7E-07 61.3 5.3 52 5-59 416-467 (852)
40 TIGR03030 CelA cellulose synth 96.1 0.0072 1.6E-07 59.4 4.8 54 5-61 305-358 (713)
41 cd06439 CESA_like_1 CESA_like_ 96.1 0.0059 1.3E-07 49.6 3.3 72 4-90 178-249 (251)
42 cd04190 Chitin_synth_C C-termi 95.8 0.011 2.4E-07 49.4 3.9 58 4-61 146-222 (244)
43 cd06434 GT2_HAS Hyaluronan syn 95.7 0.0039 8.4E-08 49.8 1.0 57 4-61 149-213 (235)
44 COG4092 Predicted glycosyltran 95.7 0.0071 1.5E-07 55.7 2.7 51 9-62 179-229 (346)
45 PRK14716 bacteriophage N4 adso 95.7 0.012 2.7E-07 56.4 4.3 49 7-58 232-286 (504)
46 cd04196 GT_2_like_d Subfamily 95.1 0.018 4E-07 44.7 2.8 52 5-59 150-201 (214)
47 cd04191 Glucan_BSP_ModH Glucan 94.8 0.044 9.5E-07 47.4 4.5 52 6-57 170-227 (254)
48 PF11397 GlcNAc: Glycosyltrans 94.6 0.03 6.4E-07 51.5 3.2 64 1-65 202-266 (343)
49 PF05679 CHGN: Chondroitin N-a 94.5 0.054 1.2E-06 51.6 4.9 56 10-65 412-471 (499)
50 cd04188 DPG_synthase DPG_synth 88.8 0.42 9.1E-06 38.1 3.0 47 10-58 159-205 (211)
51 PRK11234 nfrB bacteriophage N4 87.3 0.57 1.2E-05 47.1 3.5 47 6-55 228-280 (727)
52 PRK10018 putative glycosyl tra 84.4 1.4 2.9E-05 38.9 4.1 50 9-61 157-207 (279)
53 KOG3917|consensus 82.0 1.3 2.8E-05 40.4 3.0 45 7-51 181-225 (310)
54 PRK15489 nfrB bacteriophage N4 72.6 7.4 0.00016 39.5 5.6 43 7-52 237-285 (703)
55 PRK10063 putative glycosyl tra 70.7 6.3 0.00014 33.6 4.0 46 11-59 149-194 (248)
56 cd04195 GT2_AmsE_like GT2_AmsE 65.9 2.4 5.1E-05 33.0 0.5 28 32-59 172-199 (201)
57 PRK05454 glucosyltransferase M 64.7 9.3 0.0002 38.5 4.4 50 7-56 296-351 (691)
58 PF15017 AF1Q: Drug resistance 60.9 1.6 3.5E-05 33.7 -1.3 62 91-153 18-81 (87)
59 PF13896 Glyco_transf_49: Glyc 59.2 10 0.00022 34.2 3.3 43 21-63 242-284 (317)
60 PRK10073 putative glycosyl tra 56.7 16 0.00035 32.6 4.1 45 13-60 170-215 (328)
61 PF03385 DUF288: Protein of un 43.7 22 0.00047 34.2 2.9 28 40-69 11-39 (390)
62 KOG2288|consensus 26.5 33 0.00071 31.6 1.1 48 5-54 172-219 (274)
63 PF08260 Kinin: Insect kinin p 24.2 38 0.00082 15.9 0.6 8 26-33 1-8 (8)
64 PF11672 DUF3268: Protein of u 23.7 1E+02 0.0022 24.3 3.3 18 76-93 56-73 (102)
65 KOG2416|consensus 22.9 26 0.00057 35.8 -0.2 46 54-100 442-487 (718)
66 PRK13915 putative glucosyl-3-p 22.5 35 0.00076 30.4 0.6 74 9-94 196-271 (306)
67 KOG3629|consensus 20.1 55 0.0012 33.4 1.3 27 76-102 127-153 (728)
No 1
>KOG3736|consensus
Probab=100.00 E-value=9.3e-50 Score=379.50 Aligned_cols=118 Identities=59% Similarity=1.136 Sum_probs=114.9
Q ss_pred CCCCceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccCCCCCCCCCCchhhhh
Q psy6373 1 MQRTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFAR 80 (199)
Q Consensus 1 p~rsP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~~PY~~p~g~~~~i~R 80 (199)
|+|||+|+||+|||+|.||.+||+||+||++|||||+|||||||||||+|+++||||||||||+..||++|.+. .++.+
T Consensus 309 PirsPtMaGglFAI~r~yF~eiG~yD~gMdiwGGENlElSfrvWqCGG~lei~PCSrVGHifRk~~pY~~p~~~-~~~~~ 387 (578)
T KOG3736|consen 309 PIRSPTMAGGLFAIDRKYFGELGSYDEGMDIWGGENLELSFRVWQCGGRLEIVPCSRVGHIFRKRKPYTFPDGT-DTATR 387 (578)
T ss_pred CcCCcccCCceEEeeHHHHhhccCccccccccChhhceeeEEEeccCCeEEecCccceeeeeecCCCccCCCcc-hhhhh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999776 88999
Q ss_pred hHHHHHHhhhccccceeecccCCCCCCCCCCCcccccCC
Q psy6373 81 NTRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLNLENGG 119 (199)
Q Consensus 81 N~lRvAEVWmDEYK~~fY~~~P~~~~id~GDISe~k~~~ 119 (199)
|++|+|||||||||++||.++|.+..+|+||||+++.|-
T Consensus 388 N~~RlAeVWmDeyK~~~y~~~P~~~~~d~GDvseR~~LR 426 (578)
T KOG3736|consen 388 NLKRLAEVWMDEYKEQFYKRMPGLRNIDEGDLTERKALR 426 (578)
T ss_pred chhhhhhhhhHHHHHHHHhhCccccccCCCCchhHHHHH
Confidence 999999999999999999999999999999999999874
No 2
>KOG3738|consensus
Probab=100.00 E-value=1.4e-47 Score=355.50 Aligned_cols=118 Identities=71% Similarity=1.341 Sum_probs=115.6
Q ss_pred CCCCceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccCCCCCCCCCCchhhhh
Q psy6373 1 MQRTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFAR 80 (199)
Q Consensus 1 p~rsP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~~PY~~p~g~~~~i~R 80 (199)
|+|||+|+||+|+|+|.||++||.||..|.+|||||+|||||||||||+++|||||||||+||++|||.||.+++.+.++
T Consensus 287 PirtP~iAGGlfvidk~wF~~LGkyd~~mdiWGGEn~ElsfrvW~CGGslEIvPCSRVGHVFRkrHpy~FP~gs~~ty~~ 366 (559)
T KOG3738|consen 287 PIRTPAIAGGLFVIDKEWFNELGKYDMDMDIWGGENLELSFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNTYIK 366 (559)
T ss_pred cccCccccceeEEecHHHHHHhcccCccccccCCcceEEEEEEEeeCCeeEEEeccchhhhhhccCCCcCCCCCCcchhh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhhccccceeecccCCCCCCCCCCCcccccC
Q psy6373 81 NTRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLNLENG 118 (199)
Q Consensus 81 N~lRvAEVWmDEYK~~fY~~~P~~~~id~GDISe~k~~ 118 (199)
|..|+|||||||||.+||..+|.++.+.||||.++.++
T Consensus 367 NTkr~AEvWmDEYK~~yyaarPsAr~vpfg~i~~rL~~ 404 (559)
T KOG3738|consen 367 NTKRAAEVWMDEYKNYYYAARPSARRVPFGNIYDRLEL 404 (559)
T ss_pred cchHHHHHHHHHHHHHHHhcCchhhcCCCccHHHHHHH
Confidence 99999999999999999999999999999999998764
No 3
>KOG3737|consensus
Probab=100.00 E-value=1.3e-41 Score=316.07 Aligned_cols=118 Identities=45% Similarity=0.942 Sum_probs=111.2
Q ss_pred CCCCceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccCCCCCCCCCC----ch
Q psy6373 1 MQRTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGS----GN 76 (199)
Q Consensus 1 p~rsP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~~PY~~p~g~----~~ 76 (199)
|+|||+++||+|||+|.||.+||.||||+.+|||||+|||||+|+|||.|++||||||||+||+..||++..-. ..
T Consensus 327 PyRSPthAGGLfAInRe~F~ELG~YDpgLqiWGGEnfElSfKIWQCGG~i~fVPCSrVGHvYR~~mpy~fgk~~~k~~~p 406 (603)
T KOG3737|consen 327 PYRSPTHAGGLFAINREFFFELGLYDPGLQIWGGENFELSFKIWQCGGKILFVPCSRVGHVYRSLMPYQFGKPPIKVGSP 406 (603)
T ss_pred CCCCcccccceeeehHHHHHHhccCCCcceeecCcceeEEEEEEeeCCEEEEEEccccchhhhccccccCCCCccccCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999973211 35
Q ss_pred hhhhhHHHHHHhhhccccceeecccCCCCCCCCCCCcccccC
Q psy6373 77 VFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLNLENG 118 (199)
Q Consensus 77 ~i~RN~lRvAEVWmDEYK~~fY~~~P~~~~id~GDISe~k~~ 118 (199)
.+..|++||+++||||||++||.+.|.++.+++||||+|+.+
T Consensus 407 ~i~iNy~RVvetW~Ddyk~YfytreP~a~~l~~GDISeqlal 448 (603)
T KOG3737|consen 407 PILINYVRVVETWWDDYKDYFYTREPEAQALPYGDISEQLAL 448 (603)
T ss_pred ceEeehhhHHHHHHHhhhhheeecChhhccCCcccHHHHHHh
Confidence 788999999999999999999999999999999999998866
No 4
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.94 E-value=2.1e-27 Score=200.87 Aligned_cols=117 Identities=60% Similarity=1.183 Sum_probs=107.8
Q ss_pred CCCCceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeec-cCCCCCCCCCCchhhh
Q psy6373 1 MQRTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFR-KRHPYTFPGGSGNVFA 79 (199)
Q Consensus 1 p~rsP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR-~~~PY~~p~g~~~~i~ 79 (199)
|.++|+++|+||+|+|++|.++||||++|..||+||+|||+|+|+||+++.++|+++|.|+++ ...||..+... ..+.
T Consensus 165 ~~~~~~~~g~~~~irr~~~~~vGgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p~a~v~H~~~~~~~~~~~~~~~-~~~~ 243 (299)
T cd02510 165 PIRSPTMAGGLFAIDREWFLELGGYDEGMDIWGGENLELSFKVWQCGGSIEIVPCSRVGHIFRRKRKPYTFPGGS-GTVL 243 (299)
T ss_pred CccCccccceeeEEEHHHHHHhCCCCCcccccCchhHHHHHHHHHcCCeEEEeeccEEEEeccccCCCCCCCCcc-cHHH
Confidence 357899999999999999999999999999999999999999999999999999999999999 78899877543 2678
Q ss_pred hhHHHHHHhhhccccceeecccCCCCCCCCCCCcccccC
Q psy6373 80 RNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLNLENG 118 (199)
Q Consensus 80 RN~lRvAEVWmDEYK~~fY~~~P~~~~id~GDISe~k~~ 118 (199)
+|..|++++|+|+++.+||.++|.+..++.||+++++.+
T Consensus 244 ~n~~r~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (299)
T cd02510 244 RNYKRVAEVWMDEYKEYFYKARPELRNIDYGDLSERKAL 282 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccccCCCCCHHHHHHH
Confidence 999999999999999999999998888999999888754
No 5
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=99.46 E-value=3.7e-14 Score=104.11 Aligned_cols=61 Identities=34% Similarity=0.645 Sum_probs=48.3
Q ss_pred CCceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceE-Eeeec
Q psy6373 3 RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRV-GHVFR 63 (199)
Q Consensus 3 rsP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRV-gHifR 63 (199)
..|.+.||+|+|+|+.|.+|||||+.|.+||+||.||+.|+|.+|.++..+|++.+ .|+++
T Consensus 15 ~~~~~~Gg~~~~~~~~f~~vnGfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~~~~~~yh~~~ 76 (78)
T PF02709_consen 15 PYPNFFGGVFAISREDFEKVNGFDERFWGWGGEDDDLYNRLWKAGLKIVRVPGSIGRYHLWK 76 (78)
T ss_dssp SSTT---SEEEEEHHHHHHTTSS-SS-TSCSSHHHHHHHHHHHTT---B-SSTTTTEEEEEE
T ss_pred cCCCeeEEEEEEeHHHHHHcCCCCccccccCccHHHHHHHHHHcCCeEEecCCceEEEEEee
Confidence 45788999999999999999999999999999999999999999999999999888 48874
No 6
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.19 E-value=2.6e-11 Score=103.91 Aligned_cols=87 Identities=22% Similarity=0.245 Sum_probs=68.6
Q ss_pred ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccCCCCCCCCCCchhhhhhHHH
Q psy6373 5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFARNTRR 84 (199)
Q Consensus 5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~~PY~~p~g~~~~i~RN~lR 84 (199)
.+++|+|++|+|+.|.++||||+.|.+||+||+||++|+..+|..+...|...+.|..+....| ...|+.++
T Consensus 166 ~~~~s~~~~i~r~~f~~iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~~~~~~~~~~~~~~--------~g~R~~~~ 237 (281)
T PF10111_consen 166 IAFASSCFLINREDFLEIGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPDYLVYHSHRWPIKY--------KGFRAYFS 237 (281)
T ss_pred ccccceEEEEEHHHHHHhCCCCccccCCCcchHHHHHHHHHcCCcEecChHHhcccccCCCccc--------hHHHHHHH
Confidence 3556799999999999999999999999999999999999999999999999998875543221 23566666
Q ss_pred HHHhhhccccceeec
Q psy6373 85 AAEVWMDNYKHYYYA 99 (199)
Q Consensus 85 vAEVWmDEYK~~fY~ 99 (199)
..-..+-.++-++|.
T Consensus 238 ~~~~~~~~~~~~~~h 252 (281)
T PF10111_consen 238 YYGLPWFFEGIYMFH 252 (281)
T ss_pred HhhhHHHhcCceEEE
Confidence 655555555555443
No 7
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=98.97 E-value=7.6e-10 Score=95.78 Aligned_cols=63 Identities=21% Similarity=0.348 Sum_probs=56.6
Q ss_pred ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeec--ceEEeeeccCCC
Q psy6373 5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPC--SRVGHVFRKRHP 67 (199)
Q Consensus 5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPC--SRVgHifR~~~P 67 (199)
+.+.||++|++|+.|.+++|||++|.+||+||.||+.|+|..|..+.-.+. .++.|+++...|
T Consensus 109 ~~~~Gg~~~~~k~~f~~VNGf~n~f~GWGgEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~ 173 (219)
T cd00899 109 KTYFGGVLALTREQFRKVNGFSNAYWGWGGEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDK 173 (219)
T ss_pred ccccccceeeEHHHHHHhCCcCCcCccCCcchHHHHHHHHHCCCeEEeccCcccceeeeecCCCc
Confidence 567899999999999999999999999999999999999999999999985 557788776543
No 8
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=98.92 E-value=1.6e-09 Score=83.02 Aligned_cols=57 Identities=25% Similarity=0.354 Sum_probs=51.2
Q ss_pred eeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcC-CcEEEeecceEEeee
Q psy6373 6 MIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCG-GSLEIVPCSRVGHVF 62 (199)
Q Consensus 6 ~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCG-G~i~ivPCSRVgHif 62 (199)
...|+.+++.|..|.++||||+.+..||+||+||++|+|.+| ....+.|.+.+.|++
T Consensus 125 ~~~~~~~~~~r~~~~~~ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~~~~~~~h~~ 182 (182)
T cd06420 125 GIRGCNMSFWKKDLLAVNGFDEEFTGWGGEDSELVARLLNSGIKFRKLKFAAIVFHLW 182 (182)
T ss_pred EeccceEEEEHHHHHHhCCCCcccccCCcchHHHHHHHHHcCCcEEEecccceeeecC
Confidence 456889999999999999999999999999999999999999 566666699999975
No 9
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=98.81 E-value=4.1e-09 Score=91.00 Aligned_cols=59 Identities=24% Similarity=0.442 Sum_probs=55.1
Q ss_pred eeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccC
Q psy6373 6 MIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKR 65 (199)
Q Consensus 6 ~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~ 65 (199)
.+.|+|+.|+|+.|.++|+||+.+++| .||+|+|+|+++.|.++.++|.+.|.|.-...
T Consensus 166 ~~~G~~~li~~~~~~~vG~~de~~F~y-~eD~D~~~R~~~~G~~i~~~p~a~i~H~~g~s 224 (305)
T COG1216 166 SLSGACLLIRREAFEKVGGFDERFFIY-YEDVDLCLRARKAGYKIYYVPDAIIYHKIGSS 224 (305)
T ss_pred hcceeeeEEcHHHHHHhCCCCccccee-ehHHHHHHHHHHcCCeEEEeeccEEEEeccCC
Confidence 378999999999999999999999999 79999999999999999999999999976543
No 10
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=98.68 E-value=3e-08 Score=83.14 Aligned_cols=51 Identities=25% Similarity=0.272 Sum_probs=47.5
Q ss_pred EEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeec
Q psy6373 12 FSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFR 63 (199)
Q Consensus 12 FAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR 63 (199)
++|+|+.|.++|+||+.|++| ++|+|+++|++..|.++.++|.+.+.|...
T Consensus 153 ~li~~~~~~~iG~fde~~fi~-~~D~e~~~R~~~~G~~i~~~~~~~~~H~~g 203 (281)
T TIGR01556 153 CLITREVYQRLGMMDEELFID-HVDTEWSLRAQNYGIPLYIDPDIVLEHRIG 203 (281)
T ss_pred ceeeHHHHHHhCCccHhhccc-chHHHHHHHHHHCCCEEEEeCCEEEEEecC
Confidence 469999999999999999998 599999999999999999999999999753
No 11
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.62 E-value=4.3e-08 Score=72.72 Aligned_cols=54 Identities=22% Similarity=0.426 Sum_probs=50.7
Q ss_pred eccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEee
Q psy6373 7 IAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHV 61 (199)
Q Consensus 7 maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHi 61 (199)
..|++++++|+.|.++|+||+.+.. ++||++|++|++..|.++.++|++.|.|.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~eD~~~~~~~~~~g~~i~~~~~~~~~h~ 165 (166)
T cd04186 112 VSGAFLLVRREVFEEVGGFDEDFFL-YYEDVDLCLRARLAGYRVLYVPQAVIYHH 165 (166)
T ss_pred CceeeEeeeHHHHHHcCCCChhhhc-cccHHHHHHHHHHcCCeEEEccceEEEec
Confidence 4689999999999999999999877 57999999999999999999999999996
No 12
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=98.61 E-value=6.2e-08 Score=77.45 Aligned_cols=58 Identities=19% Similarity=0.198 Sum_probs=51.4
Q ss_pred ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeec
Q psy6373 5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFR 63 (199)
Q Consensus 5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR 63 (199)
+...+++++++|+.|.++||||+.+. .++||+||++|++++|.++.++|+..|.|...
T Consensus 149 ~~~~~~~~~~rr~~~~~~ggfd~~~~-~~~eD~d~~~r~~~~G~~~~~~~~~~v~h~~~ 206 (237)
T cd02526 149 DFLITSGSLISLEALEKVGGFDEDLF-IDYVDTEWCLRARSKGYKIYVVPDAVLKHELG 206 (237)
T ss_pred eeeeccceEEcHHHHHHhCCCCHHHc-CccchHHHHHHHHHcCCcEEEEcCeEEEeccc
Confidence 34456678899999999999999997 45799999999999999999999999998754
No 13
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=98.43 E-value=3.4e-07 Score=72.98 Aligned_cols=57 Identities=21% Similarity=0.377 Sum_probs=41.9
Q ss_pred CceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeec
Q psy6373 4 TPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFR 63 (199)
Q Consensus 4 sP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR 63 (199)
.+.+.|++++++|+.|.++|+||+ ... +||++|++|++..|+++.++|...|.|..+
T Consensus 156 ~~~~~G~~~~~rr~~~~~~g~fd~--~~~-~eD~~l~~r~~~~G~~~~~~~~~~v~~~~~ 212 (228)
T PF13641_consen 156 VAFLSGSGMLFRRSALEEVGGFDP--FIL-GEDFDLCLRLRAAGWRIVYAPDALVYHEEP 212 (228)
T ss_dssp -S-B--TEEEEEHHHHHHH-S--S--SSS-SHHHHHHHHHHHTT--EEEEEEEEEEE--S
T ss_pred eeeccCcEEEEEHHHHHHhCCCCC--CCc-ccHHHHHHHHHHCCCcEEEECCcEEEEeCC
Confidence 456789999999999999999999 444 499999999999999999999999998854
No 14
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=98.35 E-value=6.4e-07 Score=71.26 Aligned_cols=57 Identities=25% Similarity=0.314 Sum_probs=51.2
Q ss_pred eeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeecc
Q psy6373 6 MIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRK 64 (199)
Q Consensus 6 ~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~ 64 (199)
..+|++++++|+.|.++|+||+.+. + +||.||++|++.+|+++.++|...+.|..++
T Consensus 155 ~~~~~~~~~~~~~~~~~g~~~~~~~-~-~eD~~l~~r~~~~G~~~~~~~~~~~~~~~~~ 211 (249)
T cd02525 155 VDTVHHGAYRREVFEKVGGFDESLV-R-NEDAELNYRLRKAGYKIWLSPDIRVYYYPRS 211 (249)
T ss_pred ccccccceEEHHHHHHhCCCCcccC-c-cchhHHHHHHHHcCcEEEEcCCeEEEEcCCC
Confidence 5678889999999999999999975 3 6999999999999999999999999987653
No 15
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=98.29 E-value=7.6e-07 Score=71.58 Aligned_cols=54 Identities=20% Similarity=0.184 Sum_probs=47.5
Q ss_pred ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEee
Q psy6373 5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHV 61 (199)
Q Consensus 5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHi 61 (199)
...+|++++++|+.|.++||||+.+ .+||++|++|++..|.++.++|.+.+.|.
T Consensus 156 ~~~~g~~~~~rr~~~~~iGgf~~~~---~~eD~dl~~r~~~~G~~~~~~~~~~~~~~ 209 (236)
T cd06435 156 IIQHGTMCLIRRSALDDVGGWDEWC---ITEDSELGLRMHEAGYIGVYVAQSYGHGL 209 (236)
T ss_pred eEEecceEEEEHHHHHHhCCCCCcc---ccchHHHHHHHHHCCcEEEEcchhhccCc
Confidence 3457888999999999999999875 37999999999999999999999877543
No 16
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.22 E-value=1.7e-06 Score=67.96 Aligned_cols=55 Identities=27% Similarity=0.369 Sum_probs=49.7
Q ss_pred cceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccC
Q psy6373 9 GGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKR 65 (199)
Q Consensus 9 GGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~ 65 (199)
++.++++|+.|.++|+||+.+.+|| ||+++++|++..|.++ ++|.+.+.|.....
T Consensus 123 ~~~~~~~~~~~~~~g~~~~~~~~~~-eD~~~~~r~~~~G~~i-~~~~~~~~h~~~~~ 177 (202)
T cd04185 123 FVGVLISRRVVEKIGLPDKEFFIWG-DDTEYTLRASKAGPGI-YVPDAVVVHKTAIN 177 (202)
T ss_pred eEEEEEeHHHHHHhCCCChhhhccc-hHHHHHHHHHHcCCcE-EecceEEEEccccc
Confidence 3557899999999999999998885 9999999999999999 99999999987643
No 17
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=98.22 E-value=2.3e-06 Score=67.36 Aligned_cols=57 Identities=23% Similarity=0.400 Sum_probs=49.6
Q ss_pred CCceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEee
Q psy6373 3 RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHV 61 (199)
Q Consensus 3 rsP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHi 61 (199)
.+..++|++++++++.+.++|+|| ..... +||.++++|+++.|.++.++|.+.+.|.
T Consensus 68 ~~~~~~G~~~~~r~~~l~~vg~~~-~~~~~-~ED~~l~~~l~~~G~~~~~~~~~~~~~~ 124 (193)
T PF13632_consen 68 RPLFLSGSGMLFRREALREVGGFD-DPFSI-GEDMDLGFRLRRAGYRIVYVPDAIVYTE 124 (193)
T ss_pred CCccccCcceeeeHHHHHHhCccc-ccccc-cchHHHHHHHHHCCCEEEEecccceeee
Confidence 345678999999999999999999 66667 4999999999999999999999877554
No 18
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=98.18 E-value=1.3e-06 Score=67.99 Aligned_cols=50 Identities=16% Similarity=0.356 Sum_probs=43.6
Q ss_pred eccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceE
Q psy6373 7 IAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRV 58 (199)
Q Consensus 7 maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRV 58 (199)
..+++.+++|+.|.++||||+++. ++||.||++|++.+|+++.++|...+
T Consensus 149 ~~~~~~~~~r~~~~~iggf~~~~~--~~eD~~l~~rl~~~g~~~~~~~~~~~ 198 (202)
T cd04184 149 YIGHLLVYRRSLVRQVGGFREGFE--GAQDYDLVLRVSEHTDRIAHIPRVLY 198 (202)
T ss_pred CccceEeEEHHHHHHhCCCCcCcc--cchhHHHHHHHHhccceEEEccHhhh
Confidence 346677899999999999999875 67999999999999999999997433
No 19
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.11 E-value=7.1e-06 Score=64.76 Aligned_cols=48 Identities=23% Similarity=0.275 Sum_probs=41.0
Q ss_pred cceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEe
Q psy6373 9 GGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGH 60 (199)
Q Consensus 9 GGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgH 60 (199)
+++++++|+.|.++|+||+.+ .+||++|++|++.+|..+.+ |-..+.+
T Consensus 138 ~~~~~~r~~~~~~~G~fd~~~---~~ED~d~~~r~~~~G~~~~~-~~~~~~~ 185 (221)
T cd02522 138 DQGLFIRRELFEELGGFPELP---LMEDVELVRRLRRRGRPALL-PSPVTTS 185 (221)
T ss_pred CceEEEEHHHHHHhCCCCccc---cccHHHHHHHHHhCCCEEEc-Cceeeec
Confidence 457899999999999999998 57999999999999999877 6544443
No 20
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=98.01 E-value=2.8e-06 Score=67.57 Aligned_cols=55 Identities=13% Similarity=0.312 Sum_probs=46.9
Q ss_pred eccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeee
Q psy6373 7 IAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62 (199)
Q Consensus 7 maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHif 62 (199)
..|++++++|+.|.++||||. +....+||++|++|+...|.++.++|+..+.|..
T Consensus 124 ~~g~~~~~r~~~~~~~ggf~~-~~~~~~eD~~l~~rl~~~G~~i~~~~~~~~~~~~ 178 (196)
T cd02520 124 AFGKSMALRREVLDAIGGFEA-FADYLAEDYFLGKLIWRLGYRVVLSPYVVMQPLG 178 (196)
T ss_pred ccCceeeeEHHHHHhccChHH-HhHHHHHHHHHHHHHHHcCCeEEEcchheeccCC
Confidence 568899999999999999975 4334479999999999999999999998766544
No 21
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=98.01 E-value=7.5e-06 Score=64.96 Aligned_cols=55 Identities=18% Similarity=0.248 Sum_probs=48.6
Q ss_pred CceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEee
Q psy6373 4 TPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHV 61 (199)
Q Consensus 4 sP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHi 61 (199)
++...|++++++|+.|.++|+||+.+ .+||++|++|++..|.++.++|...+.|.
T Consensus 157 ~~~~~g~~~~~r~~~~~~ig~~~~~~---~~eD~~l~~r~~~~g~~i~~~~~~~~~~~ 211 (234)
T cd06421 157 AAFCCGSGAVVRREALDEIGGFPTDS---VTEDLATSLRLHAKGWRSVYVPEPLAAGL 211 (234)
T ss_pred CceecCceeeEeHHHHHHhCCCCccc---eeccHHHHHHHHHcCceEEEecCcccccc
Confidence 55667899999999999999999654 37999999999999999999999888664
No 22
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=97.97 E-value=6e-06 Score=66.79 Aligned_cols=55 Identities=16% Similarity=0.155 Sum_probs=47.6
Q ss_pred eccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeecc
Q psy6373 7 IAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRK 64 (199)
Q Consensus 7 maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~ 64 (199)
+.|+..+++|+.|.++||||+.+ .+||++|++|+++.|.++.++|++.|.|..+.
T Consensus 162 ~~g~~~~~rr~~~~~vgg~~~~~---~~ED~~l~~rl~~~G~~~~~~~~~~v~~~~~~ 216 (232)
T cd06437 162 FNGTAGVWRKECIEDAGGWNHDT---LTEDLDLSYRAQLKGWKFVYLDDVVVPAELPA 216 (232)
T ss_pred eccchhhhhHHHHHHhCCCCCCc---chhhHHHHHHHHHCCCeEEEeccceeeeeCCc
Confidence 35666678999999999999864 26999999999999999999999999877543
No 23
>PRK11204 N-glycosyltransferase; Provisional
Probab=97.86 E-value=2.2e-05 Score=69.89 Aligned_cols=57 Identities=14% Similarity=0.269 Sum_probs=51.0
Q ss_pred ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeecc
Q psy6373 5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRK 64 (199)
Q Consensus 5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~ 64 (199)
..++|++++++|+.|.++|+||+.+. +||+|+++|+..+|.++.++|.+.+.|..+.
T Consensus 207 ~~~~G~~~~~rr~~l~~vgg~~~~~~---~ED~~l~~rl~~~G~~i~~~p~~~~~~~~p~ 263 (420)
T PRK11204 207 FTVSGVITAFRKSALHEVGYWSTDMI---TEDIDISWKLQLRGWDIRYEPRALCWILMPE 263 (420)
T ss_pred eEecceeeeeeHHHHHHhCCCCCCcc---cchHHHHHHHHHcCCeEEeccccEEEeECcc
Confidence 35679999999999999999999874 6999999999999999999999999887543
No 24
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=97.84 E-value=2.7e-05 Score=61.25 Aligned_cols=53 Identities=13% Similarity=0.160 Sum_probs=44.3
Q ss_pred eeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCC-cEEEe--ecceEE
Q psy6373 6 MIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGG-SLEIV--PCSRVG 59 (199)
Q Consensus 6 ~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG-~i~iv--PCSRVg 59 (199)
...|++++++|+.|.++||||+.+..+ +||.++.+|+...|+ ++.++ |++.+.
T Consensus 154 ~~~g~~~~~rr~~~~~~ggf~~~~~~~-~eD~~~~~~~~~~g~~~~~~~~~~~~~~~ 209 (229)
T cd04192 154 MCNGANMAYRKEAFFEVGGFEGNDHIA-SGDDELLLAKVASKYPKVAYLKNPEALVT 209 (229)
T ss_pred ccccceEEEEHHHHHHhcCCccccccc-cCCHHHHHHHHHhCCCCEEEeeCcchhee
Confidence 345888999999999999999887655 799999999999999 88777 455553
No 25
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=97.82 E-value=1.8e-05 Score=60.26 Aligned_cols=57 Identities=18% Similarity=0.261 Sum_probs=48.0
Q ss_pred ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeec
Q psy6373 5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFR 63 (199)
Q Consensus 5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR 63 (199)
..+.+++++++|+.|.++|+||+.+. + ++|.||++|++..|+.+.++|...+.|..+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~f~~~~~-~-~~D~~~~~r~~~~g~~~~~~~~~~~~~~~~ 196 (202)
T cd06433 140 MPICHQATFFRRSLFEKYGGFDESYR-I-AADYDLLLRLLLAGKIFKYLPEVLAAFRLG 196 (202)
T ss_pred CcccCcceEEEHHHHHHhCCCchhhC-c-hhhHHHHHHHHHcCCceEecchhhhhheec
Confidence 34556678899999999999999986 3 479999999999999999999877766544
No 26
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=97.73 E-value=4.2e-05 Score=61.33 Aligned_cols=53 Identities=17% Similarity=0.219 Sum_probs=45.5
Q ss_pred ceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeec
Q psy6373 10 GLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFR 63 (199)
Q Consensus 10 GlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR 63 (199)
..++++|+.|.++|+||+.+..+ +||.+|.+|+...|+++..+|..-+.+..+
T Consensus 159 ~~~~~rr~~~~~~g~f~~~~~~~-~eD~~l~~r~~~~g~~i~~~~~~~~~yr~~ 211 (219)
T cd06913 159 PTWFCSREWFSHVGPFDEGGKGV-PEDLLFFYEHLRKGGGVYRVDRCLLLYRYH 211 (219)
T ss_pred ccceeehhHHhhcCCccchhccc-hhHHHHHHHHHHcCCceEEEcceeeeeeec
Confidence 34679999999999999987666 599999999999999999999877765544
No 27
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=97.65 E-value=2.4e-05 Score=64.18 Aligned_cols=49 Identities=14% Similarity=0.270 Sum_probs=42.4
Q ss_pred eccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceE
Q psy6373 7 IAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRV 58 (199)
Q Consensus 7 maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRV 58 (199)
+.|++++++|++|.++||||+. .+ +||+||++|++..|.++.++|...+
T Consensus 161 ~~g~~~~~rr~~~~~vgg~~~~--~~-~eD~~l~~rl~~~G~r~~~~~~~~~ 209 (241)
T cd06427 161 LGGTSNHFRTDVLRELGGWDPF--NV-TEDADLGLRLARAGYRTGVLNSTTL 209 (241)
T ss_pred cCCchHHhhHHHHHHcCCCCcc--cc-hhhHHHHHHHHHCCceEEEeccccc
Confidence 3577789999999999999984 34 6999999999999999999987554
No 28
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=97.59 E-value=0.00012 Score=67.03 Aligned_cols=56 Identities=16% Similarity=0.209 Sum_probs=50.0
Q ss_pred CceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeee
Q psy6373 4 TPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62 (199)
Q Consensus 4 sP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHif 62 (199)
..+.+|++.+++|+.+.++||||+.+. .||+|||+|+...|.++.++|.+.+.+.-
T Consensus 227 ~~~~sG~~~~~rr~al~~vGg~~~~~i---~ED~dl~~rl~~~G~~i~~~p~a~~~~~~ 282 (444)
T PRK14583 227 VFTVSGVVAAFRRRALADVGYWSPDMI---TEDIDISWKLQLKHWSVFFEPRGLCWILM 282 (444)
T ss_pred ceEecCceeEEEHHHHHHcCCCCCCcc---cccHHHHHHHHHcCCeEEEeeccEEeeeC
Confidence 345679999999999999999999874 69999999999999999999999887753
No 29
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=97.37 E-value=0.00019 Score=64.51 Aligned_cols=53 Identities=21% Similarity=0.302 Sum_probs=46.3
Q ss_pred ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceE
Q psy6373 5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRV 58 (199)
Q Consensus 5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRV 58 (199)
....|+|++++|+.|+++||||+-...+ .||++|+.|+...|+++.+.+...+
T Consensus 207 ~~~~G~~~lirr~~~~~vGGf~~~~~~~-~ED~~L~~r~~~~G~~v~~~~~~~~ 259 (384)
T TIGR03469 207 AAAAGGCILIRREALERIGGIAAIRGAL-IDDCTLAAAVKRSGGRIWLGLAART 259 (384)
T ss_pred eeecceEEEEEHHHHHHcCCHHHHhhCc-ccHHHHHHHHHHcCCcEEEEecCce
Confidence 3467999999999999999999876666 6999999999999999999876544
No 30
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=97.35 E-value=9.9e-05 Score=65.88 Aligned_cols=54 Identities=15% Similarity=0.158 Sum_probs=45.9
Q ss_pred eccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEee
Q psy6373 7 IAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHV 61 (199)
Q Consensus 7 maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHi 61 (199)
..|++++++|+.|.++||||+-.... +||++|+.|++.+|.++.+.|+..+.+.
T Consensus 200 ~~G~~~a~RR~~l~~iGGf~~~~~~~-~ED~~l~~~i~~~G~~v~~~~~~v~~~~ 253 (373)
T TIGR03472 200 CFGATMALRRATLEAIGGLAALAHHL-ADDYWLGELVRALGLRVVLAPVVVDTDV 253 (373)
T ss_pred ccChhhheeHHHHHHcCChHHhcccc-hHHHHHHHHHHHcCCeEEecchhhhcCC
Confidence 45888999999999999999766555 6999999999999999999998644433
No 31
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=97.30 E-value=0.00021 Score=56.55 Aligned_cols=56 Identities=21% Similarity=0.172 Sum_probs=44.0
Q ss_pred CceeccceEEEehhHHhHhc-CCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeee
Q psy6373 4 TPMIAGGLFSIDRKYFEKLG-KYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62 (199)
Q Consensus 4 sP~maGGlFAI~R~~F~eLG-GfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHif 62 (199)
.+...|++++++|+.|.++| .+++.. + ..++||++|+|.+|.++..+|...+.|..
T Consensus 148 ~~~~~~~~~~~~r~~~~~ig~~~~~~~--~-~~~~~l~~~~~~~g~~i~~~p~~~~~~~~ 204 (224)
T cd06442 148 VSDPTSGFRAYRREVLEKLIDSLVSKG--Y-KFQLELLVRARRLGYRIVEVPITFVDREH 204 (224)
T ss_pred CCCCCCccchhhHHHHHHHhhhccCCC--c-EEeHHHHHHHHHcCCeEEEeCeEEeccCC
Confidence 34456888999999999998 443321 1 34689999999999999999998887664
No 32
>KOG3588|consensus
Probab=97.15 E-value=0.00031 Score=66.67 Aligned_cols=56 Identities=23% Similarity=0.471 Sum_probs=50.9
Q ss_pred ceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccC
Q psy6373 10 GLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKR 65 (199)
Q Consensus 10 GlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~ 65 (199)
|+-++-|..|..+||||....+|||||++|=-|.-..|-.+.=+|..-+.|+++..
T Consensus 386 Gmtc~yrsd~~~vgGFD~~I~GWG~EDV~Ly~K~v~~~l~viR~p~pGl~H~~H~~ 441 (494)
T KOG3588|consen 386 GMTCQYRSDFLTVGGFDMEIKGWGGEDVDLYRKYVHSGLKVIRTPEPGLFHLWHPK 441 (494)
T ss_pred ceeEEeeccceeecCcceeeeccCcchHHHHHHHHhcCcEEEecCCCceEEeeccc
Confidence 46678899999999999999999999999988899999888889999999999865
No 33
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=97.07 E-value=0.00039 Score=63.73 Aligned_cols=55 Identities=15% Similarity=0.221 Sum_probs=48.0
Q ss_pred ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhh-cCCcEEEeecceEEeee
Q psy6373 5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQ-CGGSLEIVPCSRVGHVF 62 (199)
Q Consensus 5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWl-CGG~i~ivPCSRVgHif 62 (199)
.+++|++++++|+.+.++||||+... +||.||++|++. .|+++.+.|.+.+.|.-
T Consensus 213 ~~~sGa~~~~Rr~~l~~vggf~~~~i---~ED~~l~~rl~~~~g~kv~~~~~a~~~~~~ 268 (439)
T TIGR03111 213 FTLSGAFSAFRRETILKTQLYNSETV---GEDTDMTFQIRELLDGKVYLCENAIFYVDP 268 (439)
T ss_pred EEEccHHHhhhHHHHHHhCCCCCCCc---CccHHHHHHHHHhcCCeEEECCCCEEEEEC
Confidence 34678889999999999999998763 799999999985 69999999999998754
No 34
>KOG3916|consensus
Probab=97.04 E-value=0.00075 Score=63.01 Aligned_cols=87 Identities=23% Similarity=0.327 Sum_probs=64.0
Q ss_pred eeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcE-----EEeecceEEeeeccCCCCCCCCCCchhhhh
Q psy6373 6 MIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSL-----EIVPCSRVGHVFRKRHPYTFPGGSGNVFAR 80 (199)
Q Consensus 6 ~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i-----~ivPCSRVgHifR~~~PY~~p~g~~~~i~R 80 (199)
.+-||+-|++++-|.+|-||-..|.+|||||=||.-|+-+.|-.| .+-.+..+-|.-|...| +| ....
T Consensus 259 ~~FGGVsalt~~qf~kINGFsN~fWGWGGEDDDl~nRv~~ag~~IsRp~~~igrYkMikH~~k~n~~--n~-----~Ry~ 331 (372)
T KOG3916|consen 259 EYFGGVSALTKEQFRKINGFSNAFWGWGGEDDDLWNRVQLAGMKISRPPPEIGRYKMIKHHDKGNEP--NP-----GRYK 331 (372)
T ss_pred hhhCchhhccHHHHHHhcCCCchhcccCCcchHHHHHHHhcCceeecCCCccceeEEeecccccCCC--Ch-----HHHH
Confidence 356999999999999999999999999999999999999999876 45667777787443332 11 1233
Q ss_pred hHHHHHHhhhcc-ccceeec
Q psy6373 81 NTRRAAEVWMDN-YKHYYYA 99 (199)
Q Consensus 81 N~lRvAEVWmDE-YK~~fY~ 99 (199)
+.....++|--| ..+.-|.
T Consensus 332 lL~~tk~r~~~DGLnsl~Y~ 351 (372)
T KOG3916|consen 332 LLRNTKERQTQDGLNSLKYQ 351 (372)
T ss_pred HHHhhhhhhhhccccceeee
Confidence 444455667544 5555553
No 35
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=96.78 E-value=0.0016 Score=55.24 Aligned_cols=73 Identities=8% Similarity=0.160 Sum_probs=43.8
Q ss_pred CceeccceEEEehhHHhHhcCCCcc-CccCCcccchhhhhhhhcCCcEEEeecceEEeeeccCCCCCCCCCCchhhhhhH
Q psy6373 4 TPMIAGGLFSIDRKYFEKLGKYDMA-MSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFARNT 82 (199)
Q Consensus 4 sP~maGGlFAI~R~~F~eLGGfDeG-m~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~~PY~~p~g~~~~i~RN~ 82 (199)
+=++-|++||+.|+.| +||+. |..|..-|+++|+++...|.++.+.| ..+.|.....+ .....++.
T Consensus 144 V~avDg~ll~~~~dv~----~fde~~~~gfH~Ydvd~cl~~~~~G~~v~~~~-~~~~H~s~g~~--------~~~~~~~~ 210 (217)
T PF13712_consen 144 VQAVDGLLLATQKDVP----RFDEDLFTGFHFYDVDQCLEARRAGYRVVVPP-PWCIHFSGGSF--------DENYYEAR 210 (217)
T ss_dssp EEEE-TTEEEEETTB---------SS--SSSSHHHHHHHHHHHTT-EEEE------EE-S------------SHHHHHHH
T ss_pred EEEecceEEEEEcccC----CCCccccCCcchHHHHHHHHHHHhCCEEEecC-ceEEEcCCCCc--------cHhHHHHH
Confidence 4466799999999999 89999 89999999999999999998885544 66777755431 13456777
Q ss_pred HHHHHhh
Q psy6373 83 RRAAEVW 89 (199)
Q Consensus 83 lRvAEVW 89 (199)
.++.+.|
T Consensus 211 ~~~~~ky 217 (217)
T PF13712_consen 211 KKFLRKY 217 (217)
T ss_dssp HHHHHHH
T ss_pred HHHHhhC
Confidence 7777666
No 36
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=96.46 E-value=0.0021 Score=52.55 Aligned_cols=55 Identities=18% Similarity=0.380 Sum_probs=47.2
Q ss_pred CCceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceE
Q psy6373 3 RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRV 58 (199)
Q Consensus 3 rsP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRV 58 (199)
..+...|++++++|+.++++|||+.==... +||..|+-+++..|.++.+.|...+
T Consensus 97 ~~~~~~G~~m~~rr~~L~~~GG~~~l~~~l-adD~~l~~~~~~~G~~v~~~~~~v~ 151 (175)
T PF13506_consen 97 GAPFAWGGSMAFRREALEEIGGFEALADYL-ADDYALGRRLRARGYRVVLSPYPVV 151 (175)
T ss_pred CCCceecceeeeEHHHHHHcccHHHHhhhh-hHHHHHHHHHHHCCCeEEEcchhee
Confidence 467889999999999999999998633333 8999999999999999999996544
No 37
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=96.33 E-value=0.0054 Score=53.99 Aligned_cols=52 Identities=19% Similarity=0.305 Sum_probs=47.1
Q ss_pred CceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceE
Q psy6373 4 TPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRV 58 (199)
Q Consensus 4 sP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRV 58 (199)
+....|++.+++|+.+.++|++++... +||.+|++|+...|.++.++|.+.+
T Consensus 211 ~~~~~G~~~~~rr~aL~~~g~~~~~~i---~ED~~lt~~l~~~G~~~~~~~~~~~ 262 (439)
T COG1215 211 ISFLSGSSSAFRRSALEEVGGWLEDTI---TEDADLTLRLHLRGYRVVYVPEAIV 262 (439)
T ss_pred eEEEcceeeeEEHHHHHHhCCCCCCce---eccHHHHHHHHHCCCeEEEeecceE
Confidence 456789999999999999999998775 7999999999999999999999833
No 38
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=96.24 E-value=0.0053 Score=50.69 Aligned_cols=58 Identities=22% Similarity=0.228 Sum_probs=47.0
Q ss_pred CceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeec
Q psy6373 4 TPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFR 63 (199)
Q Consensus 4 sP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR 63 (199)
.+-..||+.+++|+.|..++.++... .| ..++||.+|+..+|.++..+|.+.+.|..-
T Consensus 163 ~~d~~g~~~~~rr~~~~~i~~~~~~~-~~-~~~~el~~~~~~~g~~i~~vp~~~~~r~~g 220 (243)
T PLN02726 163 VSDLTGSFRLYKRSALEDLVSSVVSK-GY-VFQMEIIVRASRKGYRIEEVPITFVDRVYG 220 (243)
T ss_pred CCcCCCcccceeHHHHHHHHhhccCC-Cc-EEehHHHHHHHHcCCcEEEeCcEEeCCCCC
Confidence 34466888999999999998765432 34 357999999999999999999999887754
No 39
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=96.14 E-value=0.0077 Score=61.31 Aligned_cols=52 Identities=17% Similarity=0.267 Sum_probs=45.1
Q ss_pred ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEE
Q psy6373 5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVG 59 (199)
Q Consensus 5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVg 59 (199)
+...|++++++|+.|.++||||+.. . .||+|+++|+...|.++.++|...+.
T Consensus 416 ~~~~Gs~aviRReaLeeVGGfd~~t--i-tED~dlslRL~~~Gyrv~yl~~~~a~ 467 (852)
T PRK11498 416 TFFCGSCAVIRRKPLDEIGGIAVET--V-TEDAHTSLRLHRRGYTSAYMRIPQAA 467 (852)
T ss_pred cccccceeeeEHHHHHHhcCCCCCc--c-CccHHHHHHHHHcCCEEEEEecccee
Confidence 4567999999999999999999875 3 69999999999999999998765544
No 40
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=96.12 E-value=0.0072 Score=59.42 Aligned_cols=54 Identities=11% Similarity=0.215 Sum_probs=47.2
Q ss_pred ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEee
Q psy6373 5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHV 61 (199)
Q Consensus 5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHi 61 (199)
+...|.+.+++|+.|.++||||++.. .||+++++|+...|.++.++|...+.+.
T Consensus 305 ~~~~Gs~~~iRR~al~~iGGf~~~~v---tED~~l~~rL~~~G~~~~y~~~~~~~g~ 358 (713)
T TIGR03030 305 AFFCGSAAVLRREALDEIGGIAGETV---TEDAETALKLHRRGWNSAYLDRPLIAGL 358 (713)
T ss_pred eeecCceeEEEHHHHHHcCCCCCCCc---CcHHHHHHHHHHcCCeEEEecccccccc
Confidence 44568889999999999999998653 7999999999999999999998877654
No 41
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=96.06 E-value=0.0059 Score=49.57 Aligned_cols=72 Identities=15% Similarity=0.129 Sum_probs=53.8
Q ss_pred CceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccCCCCCCCCCCchhhhhhHH
Q psy6373 4 TPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFARNTR 83 (199)
Q Consensus 4 sP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~~PY~~p~g~~~~i~RN~l 83 (199)
.....|++++++|+.|. +|+.. ...||++|++|+...|.++.++|++.+.|...... ....+..+
T Consensus 178 ~~~~~g~~~~~rr~~~~---~~~~~---~~~eD~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 242 (251)
T cd06439 178 TVGANGAIYAIRRELFR---PLPAD---TINDDFVLPLRIARQGYRVVYEPDAVAYEEVAEDG---------SEEFRRRV 242 (251)
T ss_pred eeeecchHHHhHHHHhc---CCCcc---cchhHHHHHHHHHHcCCeEEeccccEEEEeCcccH---------HHHHHHHH
Confidence 45567888899999988 56543 34699999999999999999999999987764322 23456666
Q ss_pred HHHHhhh
Q psy6373 84 RAAEVWM 90 (199)
Q Consensus 84 RvAEVWm 90 (199)
|.+.-+|
T Consensus 243 r~~~g~~ 249 (251)
T cd06439 243 RIAAGNL 249 (251)
T ss_pred HHHhccc
Confidence 7665544
No 42
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=95.79 E-value=0.011 Score=49.37 Aligned_cols=58 Identities=10% Similarity=0.006 Sum_probs=46.0
Q ss_pred CceeccceEEEehhHHhHhcCCCccCc-----------------cCCcccchhhhhhhhcCCcEEE--eecceEEee
Q psy6373 4 TPMIAGGLFSIDRKYFEKLGKYDMAMS-----------------VWGGENLEISFRVWQCGGSLEI--VPCSRVGHV 61 (199)
Q Consensus 4 sP~maGGlFAI~R~~F~eLGGfDeGm~-----------------iwGGEdiELS~RvWlCGG~i~i--vPCSRVgHi 61 (199)
+++++|+++++++..+.++|++...+. ..=+||.+|++|+...|.++.+ +|.+.|...
T Consensus 146 ~~~~~G~~~~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~~a~~~~~ 222 (244)
T cd04190 146 VTCLPGCFSMYRIEALKGDNGGKGPLLDYAYLTNTVDSLHKKNNLDLGEDRILCTLLLKAGPKRKYLYVPGAVAETD 222 (244)
T ss_pred eEECCCceEEEEehhhcCCccccccchhhccccCcccchHHHHHHhHhcccceeHHHhccCCccEEEEecccEEEEE
Confidence 567889999999999999987654211 1127999999999999999999 888887544
No 43
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=95.74 E-value=0.0039 Score=49.81 Aligned_cols=57 Identities=11% Similarity=0.061 Sum_probs=46.8
Q ss_pred CceeccceEEEehhHHhHhcCCCccC--------ccCCcccchhhhhhhhcCCcEEEeecceEEee
Q psy6373 4 TPMIAGGLFSIDRKYFEKLGKYDMAM--------SVWGGENLEISFRVWQCGGSLEIVPCSRVGHV 61 (199)
Q Consensus 4 sP~maGGlFAI~R~~F~eLGGfDeGm--------~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHi 61 (199)
++++.|++++++|+.+.+++ |+.+| ..-.+||.+|+.|+...|.++.+.|+..+.|.
T Consensus 149 ~~~~~G~~~~~rr~~l~~~~-~~~~~~~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~~~~~~~ 213 (235)
T cd06434 149 VPCLSGRTAAYRTEILKDFL-FLEEFTNETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYTSEAYTE 213 (235)
T ss_pred EEEccCcHHHHHHHHHhhhh-hHHHhhhhhhcCCCCCcCchHHHHHHHHHCCCeEEEecCCeEEEE
Confidence 45677888899999998874 44444 23357999999999999999999999999986
No 44
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=95.72 E-value=0.0071 Score=55.68 Aligned_cols=51 Identities=25% Similarity=0.468 Sum_probs=42.4
Q ss_pred cceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeee
Q psy6373 9 GGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62 (199)
Q Consensus 9 GGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHif 62 (199)
.++|.|+|..|..+||||+.|.++|.||+||=-|+=+. |...|----.|.|
T Consensus 179 T~~~liN~~~F~~tgGydE~F~GhG~EDfe~~~R~~l~---~~~~p~~~~nh~y 229 (346)
T COG4092 179 TNIFLINRRMFSLTGGYDERFRGHGSEDFEFLTRLGLY---IKNLPMLTKNHLY 229 (346)
T ss_pred cceEEEehhHHHHhcCCccccccCCchhHHHHHHHHHH---Hhccccccccccc
Confidence 46899999999999999999999999999999887554 4555655556666
No 45
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=95.68 E-value=0.012 Score=56.36 Aligned_cols=49 Identities=24% Similarity=0.312 Sum_probs=42.5
Q ss_pred eccceEEEehhHHhHh-----cC-CCccCccCCcccchhhhhhhhcCCcEEEeecceE
Q psy6373 7 IAGGLFSIDRKYFEKL-----GK-YDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRV 58 (199)
Q Consensus 7 maGGlFAI~R~~F~eL-----GG-fDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRV 58 (199)
..|..++++|+.+.+| |+ ||+... .||+|||+|+++.|.++.++|.+..
T Consensus 232 ~~Gtg~afRR~aLe~l~~~~GG~~fd~~sL---TED~dLglRL~~~G~rv~y~p~ai~ 286 (504)
T PRK14716 232 SAGVGTAFSRRALERLAAERGGQPFDSDSL---TEDYDIGLRLKRAGFRQIFVRVRAD 286 (504)
T ss_pred cCCeeEEeEHHHHHHHHhhcCCCCCCCCCc---chHHHHHHHHHHCCCEEEEeccccc
Confidence 4588899999999999 43 998854 7999999999999999999998743
No 46
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=95.09 E-value=0.018 Score=44.71 Aligned_cols=52 Identities=12% Similarity=0.073 Sum_probs=44.2
Q ss_pred ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEE
Q psy6373 5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVG 59 (199)
Q Consensus 5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVg 59 (199)
+.+.|++++++|+.|.++|+|++.+ .| .+|.++.+++.. ||.+.++|...+.
T Consensus 150 ~~~~~~~~~~r~~~~~~~~~~~~~~-~~-~~D~~~~~~~~~-~~~~~~~~~~~~~ 201 (214)
T cd04196 150 NVVTGCTMAFNRELLELALPFPDAD-VI-MHDWWLALLASA-FGKVVFLDEPLIL 201 (214)
T ss_pred CccCCceeeEEHHHHHhhccccccc-cc-cchHHHHHHHHH-cCceEEcchhHHH
Confidence 4567888999999999999999887 34 689999999888 8899999987763
No 47
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=94.77 E-value=0.044 Score=47.44 Aligned_cols=52 Identities=12% Similarity=0.071 Sum_probs=42.7
Q ss_pred eeccceEEEehhHHhHhcCCCc--cCccCC----cccchhhhhhhhcCCcEEEeecce
Q psy6373 6 MIAGGLFSIDRKYFEKLGKYDM--AMSVWG----GENLEISFRVWQCGGSLEIVPCSR 57 (199)
Q Consensus 6 ~maGGlFAI~R~~F~eLGGfDe--Gm~iwG----GEdiELS~RvWlCGG~i~ivPCSR 57 (199)
...|..++++|+-|.++|++.. |+..|+ .||+++|+++...|.++.++|...
T Consensus 170 ~~~G~~~~~Rr~al~~~~~~~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~~ 227 (254)
T cd04191 170 NYWGHNAIIRVAAFMEHCALPVLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPDLE 227 (254)
T ss_pred CccceEEEEEHHHHHHhcCCccccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccCCc
Confidence 3457889999999999877753 455564 499999999999999999999764
No 48
>PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ].
Probab=94.58 E-value=0.03 Score=51.51 Aligned_cols=64 Identities=17% Similarity=0.348 Sum_probs=50.2
Q ss_pred CCCCceeccceEEEehhHHhHhcCCCccC-ccCCcccchhhhhhhhcCCcEEEeecceEEeeeccC
Q psy6373 1 MQRTPMIAGGLFSIDRKYFEKLGKYDMAM-SVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKR 65 (199)
Q Consensus 1 p~rsP~maGGlFAI~R~~F~eLGGfDeGm-~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~ 65 (199)
|+.+|-.++|.+..+..+..+ =-|||.+ .++-||.+-+|.|+|-.|..+..=+.+.+.|.|...
T Consensus 202 P~~~~f~aaGF~Fa~~~~~~e-VP~DP~lp~lF~GEE~~~aaRlwT~GYD~Y~P~~~v~~H~Y~r~ 266 (343)
T PF11397_consen 202 PVPQPFWAAGFSFAPGHFVRE-VPYDPHLPFLFDGEEISMAARLWTHGYDFYSPTRNVLFHLYSRS 266 (343)
T ss_pred CeeeceecccEEEcchhheec-CCCCCCcccccccHHHHHHHHHHHcCCccccCCCceeEEEccCC
Confidence 566777787765555554455 4799998 234479999999999999999999999999999843
No 49
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=94.54 E-value=0.054 Score=51.65 Aligned_cols=56 Identities=16% Similarity=0.447 Sum_probs=49.3
Q ss_pred ceEEEehhHHhHh--cCCCccCccCCcccchhhhhhhhcC--CcEEEeecceEEeeeccC
Q psy6373 10 GLFSIDRKYFEKL--GKYDMAMSVWGGENLEISFRVWQCG--GSLEIVPCSRVGHVFRKR 65 (199)
Q Consensus 10 GlFAI~R~~F~eL--GGfDeGm~iwGGEdiELS~RvWlCG--G~i~ivPCSRVgHifR~~ 65 (199)
|++++-+..|..+ ||||.....||+||+||-=++=..| -.++=+|..-..|+|+..
T Consensus 412 g~~~~YksDy~~~~~~~~~~~~~gwg~ED~~l~~~~l~~~~~l~V~Ra~ep~L~h~yh~~ 471 (499)
T PF05679_consen 412 GMVCFYKSDYMRIRGGGFDLSIRGWGGEDVDLYDKFLKSGHKLHVFRAVEPGLVHRYHPK 471 (499)
T ss_pred ceEEEEhhhhhhhcccccccccccccccHHHHHHHHHhCCCceEEEEccCCCeEEEeccc
Confidence 6889999999999 9999999999999999988888888 556667788889998865
No 50
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=88.81 E-value=0.42 Score=38.08 Aligned_cols=47 Identities=21% Similarity=0.253 Sum_probs=37.3
Q ss_pred ceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceE
Q psy6373 10 GLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRV 58 (199)
Q Consensus 10 GlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRV 58 (199)
|..+++|....++++.. ....|+ +|+||++|++..|.++..+|.+..
T Consensus 159 g~~~~~r~~~~~~~~~~-~~~~~~-~d~el~~r~~~~g~~~~~vpi~~~ 205 (211)
T cd04188 159 GFKLFTRDAARRLFPRL-HLERWA-FDVELLVLARRLGYPIEEVPVRWV 205 (211)
T ss_pred CceeEcHHHHHHHHhhh-hccceE-eeHHHHHHHHHcCCeEEEcCccee
Confidence 45789999999997543 334564 799999999999999999996543
No 51
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=87.28 E-value=0.57 Score=47.12 Aligned_cols=47 Identities=23% Similarity=0.234 Sum_probs=39.4
Q ss_pred eeccceEEEehh---HHhHhc---CCCccCccCCcccchhhhhhhhcCCcEEEeec
Q psy6373 6 MIAGGLFSIDRK---YFEKLG---KYDMAMSVWGGENLEISFRVWQCGGSLEIVPC 55 (199)
Q Consensus 6 ~maGGlFAI~R~---~F~eLG---GfDeGm~iwGGEdiELS~RvWlCGG~i~ivPC 55 (199)
..+|..++++|. ...++| +||+++. .||++||+|+...|.++.+.|+
T Consensus 228 ~l~G~~~af~Rr~l~al~~~ggg~~~~~~~l---TED~dlg~rL~~~G~~v~f~~~ 280 (727)
T PRK11234 228 PSAGVGTCFSRRAVTALLEDGDGIAFDVQSL---TEDYDIGFRLKEKGMREIFVRF 280 (727)
T ss_pred ccCCceEEEecccHHHHHHhcCCCCcCCCcc---hHHHHHHHHHHHCCCEEEEccc
Confidence 356767999444 578888 6999987 7999999999999999999994
No 52
>PRK10018 putative glycosyl transferase; Provisional
Probab=84.44 E-value=1.4 Score=38.85 Aligned_cols=50 Identities=18% Similarity=0.141 Sum_probs=37.6
Q ss_pred cceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecc-eEEee
Q psy6373 9 GGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCS-RVGHV 61 (199)
Q Consensus 9 GGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCS-RVgHi 61 (199)
|+...+.+..| ..++||+.+. .+||.+|-+|+...|+.+..+|.+ .+.|+
T Consensus 157 g~~~~~~~~~~-~~~~fd~~~~--~~eDydlwlrl~~~~~~~~~~~~~l~~y~~ 207 (279)
T PRK10018 157 GNQVFTWAWRF-KECLFDTELK--AAQDYDIFLRMVVEYGEPWKVEEATQILHI 207 (279)
T ss_pred Cceeeehhhhh-hhcccCCCCC--ccccHHHHHHHHHhcCceEeeccceEEEEc
Confidence 44443444444 4578999977 369999999999999999999976 55665
No 53
>KOG3917|consensus
Probab=81.96 E-value=1.3 Score=40.45 Aligned_cols=45 Identities=27% Similarity=0.437 Sum_probs=41.2
Q ss_pred eccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEE
Q psy6373 7 IAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLE 51 (199)
Q Consensus 7 maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ 51 (199)
..||++.+++.-|..+-|....+.+||-||-|+=+|+--.|-++.
T Consensus 181 fvGGILll~~~hyk~~NGMSN~yWGWGlEDDEFy~RI~dagLqlt 225 (310)
T KOG3917|consen 181 FVGGILLLTLKHYKKLNGMSNKYWGWGLEDDEFYLRIIDAGLQLT 225 (310)
T ss_pred hcceeEEeeHHHHHHhcCccccccccCcccchhhheeccccceEe
Confidence 469999999999999999999999999999999999998886643
No 54
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=72.61 E-value=7.4 Score=39.47 Aligned_cols=43 Identities=21% Similarity=0.223 Sum_probs=35.0
Q ss_pred eccceEEEehhHHhHh---cC---CCccCccCCcccchhhhhhhhcCCcEEE
Q psy6373 7 IAGGLFSIDRKYFEKL---GK---YDMAMSVWGGENLEISFRVWQCGGSLEI 52 (199)
Q Consensus 7 maGGlFAI~R~~F~eL---GG---fDeGm~iwGGEdiELS~RvWlCGG~i~i 52 (199)
++|...+++|+...++ || ||.++. -||+|||+|+...|.+..+
T Consensus 237 l~Gv~~~frr~aL~~l~~~gg~~~~n~~sL---TED~Dlg~RL~~~G~r~~f 285 (703)
T PRK15489 237 SAGVGTCFSRRALLALMKERGNQPFNTSSL---TEDYDFSFRLAELGMQEIF 285 (703)
T ss_pred ccCcceeeeHHHHHHHHHhcCCCCCCCCCc---hHhHHHHHHHHHCCCceEE
Confidence 5566788999998877 65 555544 4999999999999999888
No 55
>PRK10063 putative glycosyl transferase; Provisional
Probab=70.73 E-value=6.3 Score=33.60 Aligned_cols=46 Identities=9% Similarity=0.135 Sum_probs=37.1
Q ss_pred eEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEE
Q psy6373 11 LFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVG 59 (199)
Q Consensus 11 lFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVg 59 (199)
...+.|+.|. .|+||+.+. + .+|.||-+|++..|..+..+|+.-+.
T Consensus 149 ~~~~~~~~~~-~~~fd~~~~-~-~~Dydl~lrl~~~g~~~~~v~~~l~~ 194 (248)
T PRK10063 149 AIFFPVSGLK-KWRYDLQYK-V-SSDYALAARLYKAGYAFKKLNGLVSE 194 (248)
T ss_pred EEEEEHHHHh-cCCCCcccc-h-HHhHHHHHHHHHcCCcEEEcCceeEE
Confidence 4556777776 588998875 3 58999999999999999999986664
No 56
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=65.91 E-value=2.4 Score=32.99 Aligned_cols=28 Identities=18% Similarity=0.058 Sum_probs=25.0
Q ss_pred CCcccchhhhhhhhcCCcEEEeecceEE
Q psy6373 32 WGGENLEISFRVWQCGGSLEIVPCSRVG 59 (199)
Q Consensus 32 wGGEdiELS~RvWlCGG~i~ivPCSRVg 59 (199)
.++||.+|.+|+...|+++.++|...+.
T Consensus 172 ~~~eD~~~~~r~~~~g~~~~~~~~~~~~ 199 (201)
T cd04195 172 PLVEDYALWARMLANGARFANLPEILVK 199 (201)
T ss_pred CCchHHHHHHHHHHcCCceecccHHHhh
Confidence 6689999999999999999999987664
No 57
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=64.71 E-value=9.3 Score=38.49 Aligned_cols=50 Identities=16% Similarity=0.103 Sum_probs=41.2
Q ss_pred eccceEEEehhHHhHhcCCCc--cCccCCcc----cchhhhhhhhcCCcEEEeecc
Q psy6373 7 IAGGLFSIDRKYFEKLGKYDM--AMSVWGGE----NLEISFRVWQCGGSLEIVPCS 56 (199)
Q Consensus 7 maGGlFAI~R~~F~eLGGfDe--Gm~iwGGE----diELS~RvWlCGG~i~ivPCS 56 (199)
..|-..+|+++-|.++||+.. |...||++ |+++++++...|.++.++|..
T Consensus 296 f~G~naIiR~~af~~~~glp~L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd~ 351 (691)
T PRK05454 296 YWGHNAIIRVKAFAEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVWLAPDL 351 (691)
T ss_pred cccceEEEEHHHHHHhcCCccccccCCCCCCcccHHHHHHHHHHHCCCEEEEcCcc
Confidence 356668899999999988743 55566654 999999999999999999984
No 58
>PF15017 AF1Q: Drug resistance and apoptosis regulator
Probab=60.88 E-value=1.6 Score=33.67 Aligned_cols=62 Identities=31% Similarity=0.446 Sum_probs=32.0
Q ss_pred ccccceeecccCCCCCCCCCCCcccccCCC--ChHHHHHHHhhhhHHHHHHHhcCCCcccCCccc
Q psy6373 91 DNYKHYYYAEVPLAKTIPFGETLNLENGGS--SEEEEEEKEKKKEEEEEEEQSRGGNRALRPSTY 153 (199)
Q Consensus 91 DEYK~~fY~~~P~~~~id~GDISe~k~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (199)
.+|..+.|-+.|+ +.|+...+.-+..-.+ ..+.++++++..+++++++..-.|---+-||..
T Consensus 18 ~~f~sF~fWR~Pl-P~id~~~lEll~~~~~~~~~~~e~~e~~~~Ee~eee~~ddD~gGWITPsNI 81 (87)
T PF15017_consen 18 EEFNSFLFWRNPL-PDIDLELLELLGLDKSSDVPESEDEEEDEEEEEEEEEEDDDGGGWITPSNI 81 (87)
T ss_pred ccccceeeccCCC-CCCCHHHHhhhccccccccccccccccccccccccccccCCCCccccchhh
Confidence 4699999999994 5676655444422111 112222223333444444444444445667653
No 59
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=59.23 E-value=10 Score=34.22 Aligned_cols=43 Identities=14% Similarity=0.255 Sum_probs=38.9
Q ss_pred HhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeec
Q psy6373 21 KLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFR 63 (199)
Q Consensus 21 eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR 63 (199)
.+=.||+.|..||...+-..+-+...|.++.++|.+-+-|.-.
T Consensus 242 ~~P~yDErF~~yg~nk~s~~~eL~~~gy~F~VL~~aFlVH~~h 284 (317)
T PF13896_consen 242 NVPLYDERFRGYGFNKISQIYELCAAGYRFHVLPNAFLVHRPH 284 (317)
T ss_pred CCCCCcccccccccchHHHHHHHHHcCCEEEEcCCeeEEecCC
Confidence 4556999999999999999999999999999999999999844
No 60
>PRK10073 putative glycosyl transferase; Provisional
Probab=56.75 E-value=16 Score=32.58 Aligned_cols=45 Identities=11% Similarity=0.080 Sum_probs=36.2
Q ss_pred EEehhHHhHhc-CCCccCccCCcccchhhhhhhhcCCcEEEeecceEEe
Q psy6373 13 SIDRKYFEKLG-KYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGH 60 (199)
Q Consensus 13 AI~R~~F~eLG-GfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgH 60 (199)
+++|+++.+.| .|++++. .||+.+.+++.+.+.++.++|..-...
T Consensus 170 l~Rr~~l~~~~~~f~~~~~---~eD~~~~~~~~~~~~~v~~~~~~ly~Y 215 (328)
T PRK10073 170 VYRRDFIVKNNIKFEPGLH---HQDIPWTTEVMFNALRVRYTEQSLYKY 215 (328)
T ss_pred HHHHHHHHHcCCccCCCCE---eccHHHHHHHHHHCCEEEEECCCEEEE
Confidence 46788888877 4777774 599999999999999999999754433
No 61
>PF03385 DUF288: Protein of unknown function, DUF288; InterPro: IPR005049 This is a protein family of unknown function.
Probab=43.70 E-value=22 Score=34.19 Aligned_cols=28 Identities=36% Similarity=0.727 Sum_probs=22.6
Q ss_pred hhh-hhhcCCcEEEeecceEEeeeccCCCCC
Q psy6373 40 SFR-VWQCGGSLEIVPCSRVGHVFRKRHPYT 69 (199)
Q Consensus 40 S~R-vWlCGG~i~ivPCSRVgHifR~~~PY~ 69 (199)
+-| +|.+|+.+.++|-. .|.+|..|.|.
T Consensus 11 aQRLLW~~G~~VsF~Ppn--V~Q~RNaHdYL 39 (390)
T PF03385_consen 11 AQRLLWLSGGTVSFVPPN--VVQFRNAHDYL 39 (390)
T ss_pred HHHHHHHcCCeEEEcCCc--eeecccccccc
Confidence 345 69999999999965 56899988874
No 62
>KOG2288|consensus
Probab=26.50 E-value=33 Score=31.61 Aligned_cols=48 Identities=17% Similarity=0.329 Sum_probs=35.1
Q ss_pred ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEee
Q psy6373 5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVP 54 (199)
Q Consensus 5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivP 54 (199)
|-..|+++||++++-.-|----.-|..|+-||+ |+-.|+.|-.+..+-
T Consensus 172 rhA~G~~YvlS~dLa~yi~in~~lL~~y~nEDV--SlGaW~~gldV~h~d 219 (274)
T KOG2288|consen 172 RHATGGGYVLSKDLATYISINRQLLHKYANEDV--SLGAWMIGLDVEHVD 219 (274)
T ss_pred hhccCceEEeeHHHHHHHHHhHHHHHhhccCCc--ccceeeeeeeeeEec
Confidence 445799999999987766444444778977765 678999997766553
No 63
>PF08260 Kinin: Insect kinin peptide; InterPro: IPR013202 This entry represents neuropeptides that are the first members of the insect kinin-family isolated from the American cockroach. Their occurrence in the retrocerebral complex suggests a physiological role as a neurohormone. The C-terminal sequence Phe-X-Ser-Trp-Gly-NH2 characterised the peptides as members of the insect kinin family. Data suggest a possible involvement of insect kinins in water-balance by regulating the osmoregulation. Insect kinins also mediate visceral muscle contractile activity (myotropic activity) []. These peptides have lengths ranging from 6 to 14 amino acids [].
Probab=24.25 E-value=38 Score=15.95 Aligned_cols=8 Identities=50% Similarity=1.124 Sum_probs=5.7
Q ss_pred CccCccCC
Q psy6373 26 DMAMSVWG 33 (199)
Q Consensus 26 DeGm~iwG 33 (199)
||.|..||
T Consensus 1 ~pafnswg 8 (8)
T PF08260_consen 1 DPAFNSWG 8 (8)
T ss_pred CccccccC
Confidence 56777776
No 64
>PF11672 DUF3268: Protein of unknown function (DUF3268); InterPro: IPR021686 This entry is represented by Listeria phage P100, Gp150. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=23.71 E-value=1e+02 Score=24.32 Aligned_cols=18 Identities=28% Similarity=0.283 Sum_probs=14.3
Q ss_pred hhhhhhHHHHHHhhhccc
Q psy6373 76 NVFARNTRRAAEVWMDNY 93 (199)
Q Consensus 76 ~~i~RN~lRvAEVWmDEY 93 (199)
+.-+|++...|...||..
T Consensus 56 d~~lR~~R~~ah~~fd~l 73 (102)
T PF11672_consen 56 DAELRRARKAAHRAFDPL 73 (102)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 556789988898888873
No 65
>KOG2416|consensus
Probab=22.92 E-value=26 Score=35.75 Aligned_cols=46 Identities=26% Similarity=0.382 Sum_probs=35.3
Q ss_pred ecceEEeeeccCCCCCCCCCCchhhhhhHHHHHHhhhccccceeecc
Q psy6373 54 PCSRVGHVFRKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAE 100 (199)
Q Consensus 54 PCSRVgHifR~~~PY~~p~g~~~~i~RN~lRvAEVWmDEYK~~fY~~ 100 (199)
+-|.|-||-...-||+.... -..|.||-.-|.+-|||--|.+-|-.
T Consensus 442 ~~SnvlhI~nLvRPFTlgQL-kelL~rtgg~Vee~WmDkIKShCyV~ 487 (718)
T KOG2416|consen 442 EPSNVLHIDNLVRPFTLGQL-KELLGRTGGNVEEFWMDKIKSHCYVS 487 (718)
T ss_pred CccceEeeecccccchHHHH-HHHHhhccCchHHHHHHHhhcceeEe
Confidence 35789999888888875321 24567888889999999999888853
No 66
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=22.51 E-value=35 Score=30.38 Aligned_cols=74 Identities=18% Similarity=0.261 Sum_probs=43.4
Q ss_pred cceEEEehhHHhHhcCCCccCccCCcccchhhhhhh-hcCC-cEEEeecceEEeeeccCCCCCCCCCCchhhhhhHHHHH
Q psy6373 9 GGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVW-QCGG-SLEIVPCSRVGHVFRKRHPYTFPGGSGNVFARNTRRAA 86 (199)
Q Consensus 9 GGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvW-lCGG-~i~ivPCSRVgHifR~~~PY~~p~g~~~~i~RN~lRvA 86 (199)
+|.+|++|+.+..+. |+++ || -++++-+.+. .+|. .+.-||-....| ...|.. ....+.+..++++
T Consensus 196 sG~~a~rr~~l~~l~-~~~~---yg-~e~~~l~~~~~~~g~~~i~~V~l~~r~h---~~~~~~----~~~~m~~~i~~~~ 263 (306)
T PRK13915 196 GGEYAGRRELLESLP-FVPG---YG-VEIGLLIDTLDRLGLDAIAQVDLGVRAH---RNQPLR----ALGRMARQIIATA 263 (306)
T ss_pred hHhHHHHHHHHHhCC-CCCC---Ce-ehHHHHHHHHHHhCcCceEEEEeccccc---CCCCHH----HHHHHHHHHHHHH
Confidence 456999999999985 7654 64 5788888877 4775 666666332222 222211 1123445555655
Q ss_pred Hhhhcccc
Q psy6373 87 EVWMDNYK 94 (199)
Q Consensus 87 EVWmDEYK 94 (199)
-..|..|-
T Consensus 264 ~~~~~~~~ 271 (306)
T PRK13915 264 LSRLGRPD 271 (306)
T ss_pred HHHHhhcC
Confidence 55554443
No 67
>KOG3629|consensus
Probab=20.08 E-value=55 Score=33.39 Aligned_cols=27 Identities=19% Similarity=0.521 Sum_probs=24.0
Q ss_pred hhhhhhHHHHHHhhhccccceeecccC
Q psy6373 76 NVFARNTRRAAEVWMDNYKHYYYAEVP 102 (199)
Q Consensus 76 ~~i~RN~lRvAEVWmDEYK~~fY~~~P 102 (199)
..+.+|++||...||+.|-+-||.-.|
T Consensus 127 ~~~v~naI~il~~WL~~~pEDF~~~~~ 153 (728)
T KOG3629|consen 127 ALLVQNAIRILMCWLETYPEDFYDSDK 153 (728)
T ss_pred HHHHHHHHHHHHHHHHhChHhhcCccH
Confidence 457799999999999999999998665
Done!