BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6374
(305 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P62752|RL23A_RAT 60S ribosomal protein L23a OS=Rattus norvegicus GN=Rpl23a PE=2 SV=1
Length = 156
Score = 185 bits (470), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/126 (73%), Positives = 106/126 (84%)
Query: 180 GGHHTRTRKIRTSVRFHRPRTQRGGAAPKYMRRSVPRRNRMDAFNIIKYPLTTESAMKKI 239
G H + +KIRTS F RP+T R PKY R+S PRRN++D + IIK+PLTTESAMKKI
Sbjct: 31 GVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKI 90
Query: 240 EDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVA 299
EDNNTLVFIV ++ANKH IK AVKK+YDI+VAKVNTLIRPDG+KKAYVRLA DYDALDVA
Sbjct: 91 EDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVA 150
Query: 300 NKIGII 305
NKIGII
Sbjct: 151 NKIGII 156
>sp|P62751|RL23A_MOUSE 60S ribosomal protein L23a OS=Mus musculus GN=Rpl23a PE=1 SV=1
Length = 156
Score = 185 bits (470), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/126 (73%), Positives = 106/126 (84%)
Query: 180 GGHHTRTRKIRTSVRFHRPRTQRGGAAPKYMRRSVPRRNRMDAFNIIKYPLTTESAMKKI 239
G H + +KIRTS F RP+T R PKY R+S PRRN++D + IIK+PLTTESAMKKI
Sbjct: 31 GVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKI 90
Query: 240 EDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVA 299
EDNNTLVFIV ++ANKH IK AVKK+YDI+VAKVNTLIRPDG+KKAYVRLA DYDALDVA
Sbjct: 91 EDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVA 150
Query: 300 NKIGII 305
NKIGII
Sbjct: 151 NKIGII 156
>sp|P62750|RL23A_HUMAN 60S ribosomal protein L23a OS=Homo sapiens GN=RPL23A PE=1 SV=1
Length = 156
Score = 185 bits (470), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/126 (73%), Positives = 106/126 (84%)
Query: 180 GGHHTRTRKIRTSVRFHRPRTQRGGAAPKYMRRSVPRRNRMDAFNIIKYPLTTESAMKKI 239
G H + +KIRTS F RP+T R PKY R+S PRRN++D + IIK+PLTTESAMKKI
Sbjct: 31 GVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKI 90
Query: 240 EDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVA 299
EDNNTLVFIV ++ANKH IK AVKK+YDI+VAKVNTLIRPDG+KKAYVRLA DYDALDVA
Sbjct: 91 EDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVA 150
Query: 300 NKIGII 305
NKIGII
Sbjct: 151 NKIGII 156
>sp|Q24JY1|RL23A_BOVIN 60S ribosomal protein L23a OS=Bos taurus GN=RPL23A PE=2 SV=1
Length = 156
Score = 185 bits (470), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/126 (73%), Positives = 106/126 (84%)
Query: 180 GGHHTRTRKIRTSVRFHRPRTQRGGAAPKYMRRSVPRRNRMDAFNIIKYPLTTESAMKKI 239
G H + +KIRTS F RP+T R PKY R+S PRRN++D + IIK+PLTTESAMKKI
Sbjct: 31 GVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKI 90
Query: 240 EDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVA 299
EDNNTLVFIV ++ANKH IK AVKK+YDI+VAKVNTLIRPDG+KKAYVRLA DYDALDVA
Sbjct: 91 EDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVA 150
Query: 300 NKIGII 305
NKIGII
Sbjct: 151 NKIGII 156
>sp|O22644|RL23A_FRIAG 60S ribosomal protein L23A OS=Fritillaria agrestis GN=RPL23A PE=2
SV=1
Length = 154
Score = 169 bits (427), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/153 (64%), Positives = 116/153 (75%), Gaps = 4/153 (2%)
Query: 153 KGGKKPLGKNEQGQVKKALKSKLKVLKGGHHTRTRKIRTSVRFHRPRTQRGGAAPKYMRR 212
K KKP GK + +V KA+KS + L+ + +KIRTSV FHRP+T + PKY R
Sbjct: 6 KVAKKPDGKAQALKVAKAVKSGVSTLQK----KAKKIRTSVTFHRPKTLKKDRNPKYPRI 61
Query: 213 SVPRRNRMDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAK 272
S P RN++D + I+KYPLTTESAMKKIEDNNTLVFIV ++A+K IKAAVKKMYDI K
Sbjct: 62 SAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKAAVKKMYDIQTKK 121
Query: 273 VNTLIRPDGKKKAYVRLARDYDALDVANKIGII 305
VNTLIRPDG KKAYVRL DYDALD+ANKIGII
Sbjct: 122 VNTLIRPDGTKKAYVRLTPDYDALDIANKIGII 154
>sp|Q9AT35|RL23A_DAUCA 60S ribosomal protein L23a OS=Daucus carota GN=RPL23A PE=2 SV=1
Length = 154
Score = 164 bits (415), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 88/121 (72%), Positives = 96/121 (79%)
Query: 185 RTRKIRTSVRFHRPRTQRGGAAPKYMRRSVPRRNRMDAFNIIKYPLTTESAMKKIEDNNT 244
+ +KIRTSV FHRPRT PKY R S RN++D + I+KYPLTTESAMKKIEDNNT
Sbjct: 34 KVKKIRTSVTFHRPRTLTKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNT 93
Query: 245 LVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 304
LVFIV ++ANK IK AVKKMYDI KVNTLIRPDG KKAYVRL DYDALDVANKIGI
Sbjct: 94 LVFIVDIRANKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 153
Query: 305 I 305
I
Sbjct: 154 I 154
>sp|Q20647|R23A2_CAEEL 60S ribosomal protein L23a 2 OS=Caenorhabditis elegans GN=rpl-25.2
PE=3 SV=1
Length = 146
Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/143 (57%), Positives = 104/143 (72%)
Query: 163 EQGQVKKALKSKLKVLKGGHHTRTRKIRTSVRFHRPRTQRGGAAPKYMRRSVPRRNRMDA 222
+V KA+++K V+KG + +RTSV F RP+T AP+Y R+S P R+++D+
Sbjct: 4 SSNKVGKAIQAKKAVVKGSKTNVRKNVRTSVHFRRPKTLVTARAPRYARKSAPARDKLDS 63
Query: 223 FNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGK 282
F +IK P TTES+MKKIED+NTLVFIV +ANKHHIK AV +Y++ KVNTLI P +
Sbjct: 64 FAVIKAPHTTESSMKKIEDHNTLVFIVDEKANKHHIKRAVHALYNVKAVKVNTLITPLQQ 123
Query: 283 KKAYVRLARDYDALDVANKIGII 305
KKAYVRLA DYDALDVANKIG I
Sbjct: 124 KKAYVRLASDYDALDVANKIGFI 146
>sp|P48162|R23A1_CAEEL 60S ribosomal protein L23a 1 OS=Caenorhabditis elegans GN=rpl-25.1
PE=3 SV=1
Length = 147
Score = 158 bits (400), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/137 (59%), Positives = 102/137 (74%)
Query: 169 KALKSKLKVLKGGHHTRTRKIRTSVRFHRPRTQRGGAAPKYMRRSVPRRNRMDAFNIIKY 228
KAL +K KV+KG T R++RTSV F RP T + ++ R+S P+ ++MD F II++
Sbjct: 11 KALDAKKKVVKGKRTTHRRQVRTSVHFRRPVTLKTARQARFPRKSAPKTSKMDHFRIIQH 70
Query: 229 PLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKKAYVR 288
PLTTESAMKKIE++NTLVFIV ANK+ IK AV K+Y++ KVNTLI P +KKAYVR
Sbjct: 71 PLTTESAMKKIEEHNTLVFIVSNDANKYQIKDAVHKLYNVQALKVNTLITPLQQKKAYVR 130
Query: 289 LARDYDALDVANKIGII 305
L DYDALDVANKIG+I
Sbjct: 131 LTADYDALDVANKIGVI 147
>sp|P51997|RL25_PUCGR 60S ribosomal protein L25 OS=Puccinia graminis PE=2 SV=2
Length = 158
Score = 158 bits (399), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/119 (65%), Positives = 90/119 (75%)
Query: 187 RKIRTSVRFHRPRTQRGGAAPKYMRRSVPRRNRMDAFNIIKYPLTTESAMKKIEDNNTLV 246
R+IRTSV F RP+T R PKY R SVP RMDA+ + PL TESAMKKIEDNNTL+
Sbjct: 40 RRIRTSVTFRRPKTLRLSRKPKYPRTSVPHAPRMDAYRTLVRPLNTESAMKKIEDNNTLL 99
Query: 247 FIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 305
FIV L+ANK I AVKK+YD+ +VNTLIRPDGKKKA+VRL + DALD+ANKIG I
Sbjct: 100 FIVDLKANKRQIADAVKKLYDVTPLRVNTLIRPDGKKKAFVRLTPEVDALDIANKIGFI 158
>sp|Q07761|RL23A_TOBAC 60S ribosomal protein L23a OS=Nicotiana tabacum GN=RPL23A PE=2 SV=1
Length = 154
Score = 157 bits (397), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 86/121 (71%), Positives = 98/121 (80%)
Query: 185 RTRKIRTSVRFHRPRTQRGGAAPKYMRRSVPRRNRMDAFNIIKYPLTTESAMKKIEDNNT 244
+++KIRT V FHRP+T + PKY R S P RN++D + I+KYPLTTESAMKKIEDNNT
Sbjct: 34 KSQKIRTKVTFHRPKTLKKDRNPKYPRISAPGRNKLDQYGILKYPLTTESAMKKIEDNNT 93
Query: 245 LVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 304
LVFIV ++A+K IK AVKKMYDI KVNTLIRPDG KKAYVRL DYDALDVANKIGI
Sbjct: 94 LVFIVDIKADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 153
Query: 305 I 305
I
Sbjct: 154 I 154
>sp|P48045|RL25_KLULA 60S ribosomal protein L25 OS=Kluyveromyces lactis (strain ATCC 8585
/ CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=RPL25 PE=3 SV=1
Length = 142
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 103/137 (75%)
Query: 169 KALKSKLKVLKGGHHTRTRKIRTSVRFHRPRTQRGGAAPKYMRRSVPRRNRMDAFNIIKY 228
KA +K V+KG + + K+RTS F P+T + +PKY ++VP NR+D++ +I+
Sbjct: 6 KATAAKKAVVKGTNGKKALKVRTSASFRLPKTLKLARSPKYATKAVPHYNRLDSYKVIEQ 65
Query: 229 PLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKKAYVR 288
P+T+E+AMKK+ED NTLVF V L+ANK+ IK AVK++Y+++V VNTL+RP+G KKAYVR
Sbjct: 66 PITSETAMKKVEDGNTLVFKVSLKANKYQIKKAVKELYEVDVLSVNTLVRPNGTKKAYVR 125
Query: 289 LARDYDALDVANKIGII 305
L D+DALD+AN+IG I
Sbjct: 126 LTADFDALDIANRIGYI 142
>sp|Q9M3C3|R23A2_ARATH 60S ribosomal protein L23a-2 OS=Arabidopsis thaliana GN=RPL23AB
PE=2 SV=1
Length = 154
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/119 (70%), Positives = 94/119 (78%)
Query: 187 RKIRTSVRFHRPRTQRGGAAPKYMRRSVPRRNRMDAFNIIKYPLTTESAMKKIEDNNTLV 246
+KIRT V FHRP+T PKY + S RN++D + I+KYPLTTESAMKKIEDNNTLV
Sbjct: 36 KKIRTKVTFHRPKTLTVPRKPKYPKISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLV 95
Query: 247 FIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 305
FIV ++A+K IK AVKKMYDI KVNTLIRPDG KKAYVRL DYDALDVANKIGII
Sbjct: 96 FIVDIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
>sp|O74391|RL25B_SCHPO 60S ribosomal protein L25-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl25b PE=3 SV=1
Length = 141
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 96/129 (74%)
Query: 177 VLKGGHHTRTRKIRTSVRFHRPRTQRGGAAPKYMRRSVPRRNRMDAFNIIKYPLTTESAM 236
V KG H+ RK+RTS F RP+T PKY R+SVP +R+D + II P+ +ESAM
Sbjct: 13 VQKGIHNKVARKVRTSTTFRRPKTLELARKPKYARKSVPHASRLDEYKIIVNPINSESAM 72
Query: 237 KKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKKAYVRLARDYDAL 296
KKIED+NTLVF VHL+ANK IK AVKK+Y ++ K+NTLIRP+G KKA+V+L+ D DAL
Sbjct: 73 KKIEDDNTLVFHVHLKANKFTIKNAVKKLYSVDAVKINTLIRPNGTKKAFVKLSADADAL 132
Query: 297 DVANKIGII 305
DVAN+IG +
Sbjct: 133 DVANRIGFL 141
>sp|P08792|RL25_CYBJA 60S ribosomal protein L25 OS=Cyberlindnera jadinii GN=RPL25 PE=3
SV=1
Length = 142
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 100/137 (72%)
Query: 169 KALKSKLKVLKGGHHTRTRKIRTSVRFHRPRTQRGGAAPKYMRRSVPRRNRMDAFNIIKY 228
KA +K V+KG + ++ K+RTS F P+T + APKY R++VP R+D + +I
Sbjct: 6 KAASAKKAVVKGSNGSKALKVRTSTTFRLPKTLKLTRAPKYARKAVPHYQRLDNYKVIVA 65
Query: 229 PLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKKAYVR 288
P+ +E+AMKK+ED NTLVF V ++ANKH IK AVK +Y+++V VNTLIRP+G KKAYVR
Sbjct: 66 PIASETAMKKVEDGNTLVFQVDIKANKHQIKQAVKDLYEVDVLAVNTLIRPNGTKKAYVR 125
Query: 289 LARDYDALDVANKIGII 305
L D+DALD+ANKIG I
Sbjct: 126 LTADHDALDIANKIGYI 142
>sp|P04456|RL25_YEAST 60S ribosomal protein L25 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL25 PE=1 SV=4
Length = 142
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 93/118 (78%)
Query: 188 KIRTSVRFHRPRTQRGGAAPKYMRRSVPRRNRMDAFNIIKYPLTTESAMKKIEDNNTLVF 247
K+RTS F P+T + APKY ++VP NR+D++ +I+ P+T+E+AMKK+ED N LVF
Sbjct: 25 KVRTSATFRLPKTLKLARAPKYASKAVPHYNRLDSYKVIEQPITSETAMKKVEDGNILVF 84
Query: 248 IVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 305
V ++ANK+ IK AVK++Y+++V KVNTL+RP+G KKAYVRL DYDALD+AN+IG I
Sbjct: 85 QVSMKANKYQIKKAVKELYEVDVLKVNTLVRPNGTKKAYVRLTADYDALDIANRIGYI 142
>sp|Q8LD46|R23A1_ARATH 60S ribosomal protein L23a-1 OS=Arabidopsis thaliana GN=RPL23AA
PE=2 SV=2
Length = 154
Score = 147 bits (372), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/117 (70%), Positives = 91/117 (77%)
Query: 189 IRTSVRFHRPRTQRGGAAPKYMRRSVPRRNRMDAFNIIKYPLTTESAMKKIEDNNTLVFI 248
IRT V FHRP+T KY + S RN++D + I+KYPLTTESAMKKIEDNNTLVFI
Sbjct: 38 IRTKVTFHRPKTLTKPRTGKYPKISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFI 97
Query: 249 VHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 305
V ++A+K IK AVKKMYDI KVNTLIRPDG KKAYVRL DYDALDVANKIGII
Sbjct: 98 VDIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
>sp|Q10330|RL25A_SCHPO 60S ribosomal protein L25-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl25a PE=1 SV=1
Length = 141
Score = 145 bits (365), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 94/129 (72%)
Query: 177 VLKGGHHTRTRKIRTSVRFHRPRTQRGGAAPKYMRRSVPRRNRMDAFNIIKYPLTTESAM 236
V KG H+ +K+RTS F RP+T + PKY R+SV R+D + II P+ +ESAM
Sbjct: 13 VQKGIHNKVAKKVRTSTTFRRPKTLQLSRKPKYARKSVAHAPRLDEYKIIVNPINSESAM 72
Query: 237 KKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKKAYVRLARDYDAL 296
KKIED+NTLVF VHL+ANK IK AV+K+Y + K+NTLIRP+G KKA+V+L+ D DAL
Sbjct: 73 KKIEDDNTLVFHVHLKANKFTIKEAVRKLYSVEPVKINTLIRPNGTKKAFVKLSADADAL 132
Query: 297 DVANKIGII 305
DVAN+IG +
Sbjct: 133 DVANRIGFL 141
>sp|Q54BQ3|RL23A_DICDI 60S ribosomal protein L23a OS=Dictyostelium discoideum GN=rpl23a
PE=1 SV=1
Length = 169
Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 88/126 (69%)
Query: 180 GGHHTRTRKIRTSVRFHRPRTQRGGAAPKYMRRSVPRRNRMDAFNIIKYPLTTESAMKKI 239
G + TRK+RTSV F RP T P Y RRSV + +MD F I+K PLTTESA +KI
Sbjct: 44 GVSNKSTRKVRTSVIFRRPVTLNNPKKPAYPRRSVNKITKMDQFRILKAPLTTESATQKI 103
Query: 240 EDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVA 299
E +NT+ F+V + ANK + AV KMYD+ V +VNTLI P G+KKA+V L+ +++A DVA
Sbjct: 104 EGSNTITFMVDMFANKSQVADAVAKMYDVKVKRVNTLITPRGEKKAFVTLSPEFEAADVA 163
Query: 300 NKIGII 305
NKIG+I
Sbjct: 164 NKIGLI 169
>sp|P41165|RL23A_TRYBB 60S ribosomal protein L23a OS=Trypanosoma brucei brucei GN=RPL23A
PE=2 SV=1
Length = 164
Score = 132 bits (331), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 83/119 (69%)
Query: 187 RKIRTSVRFHRPRTQRGGAAPKYMRRSVPRRNRMDAFNIIKYPLTTESAMKKIEDNNTLV 246
RK T +F RP T R A K +N+ DAF II+YPLTT+ AMKKIE+NNTL
Sbjct: 46 RKAYTRPQFRRPHTYRRPATVKPSSNVSAIKNKWDAFRIIRYPLTTDKAMKKIEENNTLT 105
Query: 247 FIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 305
FIV +ANK IK A++K+Y + KVNTLIRPDG KKAY+RL+ YDALD ANK+G++
Sbjct: 106 FIVDSRANKTEIKKAIRKLYQVKTVKVNTLIRPDGLKKAYIRLSASYDALDTANKMGLV 164
>sp|P0DJ57|RL23A_TETTS 60S ribosomal protein L23A OS=Tetrahymena thermophila (strain
SB210) GN=RPL23A PE=1 SV=1
Length = 150
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 93/148 (62%), Gaps = 4/148 (2%)
Query: 161 KNEQGQVKKALKSKLKVLKGGHHTRTRKIRTSVRFHRPRTQRGGAAPKY---MRRSVPRR 217
+N+ V KA K+ KV K G K T VRF RP+T + APKY +R +
Sbjct: 4 ENKTQAVNKA-KNTAKVAKKGSSITKHKTYTGVRFFRPKTLQLAKAPKYSRTVRAHLKVS 62
Query: 218 NRMDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLI 277
+D +++K PLTTE AMKK+ED NT+VF VH ++ K IK+A +K+Y++ V VNTL
Sbjct: 63 GHLDNHSVVKTPLTTEKAMKKMEDENTMVFYVHNRSTKPQIKSAFEKLYNVKVRSVNTLN 122
Query: 278 RPDGKKKAYVRLARDYDALDVANKIGII 305
G KKAY+RLA D D+L +ANKIG+I
Sbjct: 123 TITGNKKAYIRLAADSDSLTLANKIGLI 150
>sp|Q9LWB5|RK23_SPIOL 50S ribosomal protein L23, chloroplastic OS=Spinacia oleracea
GN=RPL23 PE=1 SV=1
Length = 198
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 215 PRRNRMDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVN 274
PRR +D + I++ P+ TE+A+K I D N+L+F V ++A+K I+ A+ + + V KVN
Sbjct: 105 PRR-ILDVYQILQSPIITEAAIKNIADENSLLFTVDVRADKKMIREAISNFFGVKVRKVN 163
Query: 275 TLIRPDGKKKAYVRLARDYDALDVANKIGII 305
TLIRPDG KKAY+ L ++Y+A ++A KIGI
Sbjct: 164 TLIRPDGTKKAYIMLNKEYNASELAKKIGIF 194
>sp|P54016|RL23_METJA 50S ribosomal protein L23P OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rpl23p PE=3 SV=1
Length = 86
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 60/85 (70%)
Query: 220 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 279
MDAF++IK P+ TE ++ IE+ N LVF V +A K IK A+K+++D+ V KVNTLI P
Sbjct: 1 MDAFDVIKAPVVTEKTVRMIEEENKLVFYVDRRATKQDIKRAMKELFDVEVEKVNTLITP 60
Query: 280 DGKKKAYVRLARDYDALDVANKIGI 304
G+KKAYV+L YDA +A +GI
Sbjct: 61 KGEKKAYVKLKEGYDASKIAASLGI 85
>sp|A6UV66|RL23_META3 50S ribosomal protein L23P OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rpl23p PE=3 SV=1
Length = 86
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 61/85 (71%)
Query: 220 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 279
MDAF++IK P+ +E MK IE+ N LVF + +A K +K AVK+++D+ V +NTLI P
Sbjct: 1 MDAFDVIKMPIISEKTMKLIEEENKLVFYIDKKATKTDVKNAVKELFDVEVKDLNTLITP 60
Query: 280 DGKKKAYVRLARDYDALDVANKIGI 304
GKKKAY++L +YDA +VA +GI
Sbjct: 61 KGKKKAYIKLKDEYDAGEVAANLGI 85
>sp|A6VHD4|RL23_METM7 50S ribosomal protein L23P OS=Methanococcus maripaludis (strain C7
/ ATCC BAA-1331) GN=rpl23p PE=3 SV=1
Length = 86
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 220 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 279
MDAF++IK P+ +E MK IE+ N LVF V +A K I+AA+K+++D VA +NT I P
Sbjct: 1 MDAFDVIKTPIVSEKTMKLIEEENRLVFYVERKATKADIRAAIKELFDAEVADINTSITP 60
Query: 280 DGKKKAYVRLARDYDALDVANKIGI 304
GKKKAY+ L +Y+A +VA +GI
Sbjct: 61 KGKKKAYITLKSEYNAGEVAASLGI 85
>sp|A4FVY0|RL23_METM5 50S ribosomal protein L23P OS=Methanococcus maripaludis (strain C5
/ ATCC BAA-1333) GN=rpl23p PE=3 SV=1
Length = 86
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 220 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 279
MDAF++IK P+ +E MK IE+ N LVF V +A K I+AA+K+++D VA +NT I P
Sbjct: 1 MDAFDVIKTPIVSEKTMKLIEEENRLVFYVERKATKADIRAAIKELFDAEVADINTSITP 60
Query: 280 DGKKKAYVRLARDYDALDVANKIGI 304
GKKKAY+ L +Y+A +VA +GI
Sbjct: 61 KGKKKAYITLKAEYNAGEVAASLGI 85
>sp|A9A9B6|RL23_METM6 50S ribosomal protein L23P OS=Methanococcus maripaludis (strain C6
/ ATCC BAA-1332) GN=rpl23p PE=3 SV=1
Length = 86
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 59/85 (69%)
Query: 220 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 279
MDAF++IK P+ +E MK IE+ N LVF V +A K I AA+K+++D VA +NT I P
Sbjct: 1 MDAFDVIKTPIVSEKTMKLIEEENRLVFYVERKATKADISAAIKELFDAEVADINTSITP 60
Query: 280 DGKKKAYVRLARDYDALDVANKIGI 304
GKKKAY+ L +Y+A +VA +GI
Sbjct: 61 KGKKKAYITLKAEYNAGEVAASLGI 85
>sp|Q6LX09|RL23_METMP 50S ribosomal protein L23P OS=Methanococcus maripaludis (strain S2
/ LL) GN=rpl23p PE=3 SV=1
Length = 86
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 60/85 (70%)
Query: 220 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 279
MDAF++IK P+ +E MK IE+ N LVF V +A K ++AA+K+++D VA +NT I P
Sbjct: 1 MDAFDVIKTPIVSEKTMKLIEEENRLVFYVERKATKADVRAAIKELFDAEVADINTSITP 60
Query: 280 DGKKKAYVRLARDYDALDVANKIGI 304
GKKKAY+ L +Y+A +VA +GI
Sbjct: 61 KGKKKAYITLKDEYNAGEVAASLGI 85
>sp|P10143|RL23_METVS 50S ribosomal protein L23P OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=rpl23p PE=1 SV=1
Length = 86
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 61/85 (71%)
Query: 220 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 279
MDAF++IK P+ +E MK IE+ N LVF V +A K IK A+K++++ VA+VNT I P
Sbjct: 1 MDAFDVIKTPIVSEKTMKLIEEENRLVFYVERKATKEDIKEAIKQLFNAEVAEVNTNITP 60
Query: 280 DGKKKAYVRLARDYDALDVANKIGI 304
G+KKAY++L +Y+A +VA +GI
Sbjct: 61 KGQKKAYIKLKDEYNAGEVAASLGI 85
>sp|Q8TY92|RL23_METKA 50S ribosomal protein L23P OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl23p PE=3 SV=1
Length = 95
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 59/85 (69%)
Query: 221 DAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPD 280
D +++ YP+ TE AM+ +E N L FIV ANK IK AV++++D+ V KVNTLI P
Sbjct: 11 DPHDVLLYPVATEKAMRLMEAENKLTFIVRRDANKPLIKKAVEELFDVEVEKVNTLITPT 70
Query: 281 GKKKAYVRLARDYDALDVANKIGII 305
G+KKAYV+L +Y A DVA +GI+
Sbjct: 71 GEKKAYVKLKPEYRAEDVAVDLGIL 95
>sp|Q5JDH1|RL23_PYRKO 50S ribosomal protein L23P OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rpl23p PE=3 SV=1
Length = 86
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 220 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 279
MD + +I PL TE A+ IE N L FIV +A K IK AV++M+++ VAKVNTL+
Sbjct: 1 MDPYKVIIRPLVTEKAVSLIERENKLTFIVDRRATKQDIKRAVEEMFNVKVAKVNTLVTM 60
Query: 280 DGKKKAYVRLARDYDALDVANKIGII 305
G+KKAYV+L +YDA ++A ++G+
Sbjct: 61 KGEKKAYVKLKPEYDASEIAARLGLF 86
>sp|Q975I3|RL23_SULTO 50S ribosomal protein L23P OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rpl23p PE=3 SV=1
Length = 82
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 60/81 (74%)
Query: 225 IIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKK 284
IIK LTTE A+K IE NTL IV+ +A K IK ++KM+++ V KVNTLI G+KK
Sbjct: 2 IIKEFLTTEKAIKLIESQNTLTVIVNKEATKADIKREIEKMFNVKVDKVNTLITIRGEKK 61
Query: 285 AYVRLARDYDALDVANKIGII 305
AYV+L ++++A D+A+++GI+
Sbjct: 62 AYVKLKKEFNASDIAHRLGIL 82
>sp|Q8U000|RL23_PYRFU 50S ribosomal protein L23P OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl23p PE=1 SV=2
Length = 86
Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%)
Query: 220 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 279
MD + +I P+ TE A+ IE N L FIV +A K IK AV++++++ V KVNTLI P
Sbjct: 1 MDPYKVIIRPVVTEKAISLIEKENKLTFIVDRRATKQDIKRAVEEIFNVKVEKVNTLITP 60
Query: 280 DGKKKAYVRLARDYDALDVANKIGII 305
G+KKAYV+L +Y A +VA ++G+
Sbjct: 61 RGEKKAYVKLKPEYSASEVAARLGLF 86
>sp|B6YSL5|RL23_THEON 50S ribosomal protein L23P OS=Thermococcus onnurineus (strain NA1)
GN=rpl23p PE=3 SV=1
Length = 86
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 57/86 (66%)
Query: 220 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 279
MD + +I P+ TE A+ IE+ N L FIV +A K IK AV+ M+D+ V KVNTLI
Sbjct: 1 MDPYKVIIRPVVTEKAVAMIENENKLTFIVDRRATKQDIKRAVEAMFDVKVEKVNTLITM 60
Query: 280 DGKKKAYVRLARDYDALDVANKIGII 305
G+KKAYV+L +Y A ++A +IG+
Sbjct: 61 RGEKKAYVKLKPEYSASEIAARIGLF 86
>sp|Q4JB42|RL23_SULAC 50S ribosomal protein L23P OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=rpl23p PE=3 SV=1
Length = 82
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 56/81 (69%)
Query: 225 IIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKK 284
IIK L TE A+K IE NTL IV+ K IK V+K++ + V K+NTLI P G+KK
Sbjct: 2 IIKEFLATEKAVKLIESQNTLTIIVNRNTTKKDIKNEVEKLFSVKVEKINTLITPKGEKK 61
Query: 285 AYVRLARDYDALDVANKIGII 305
AYV+L ++Y A DVA+K+G++
Sbjct: 62 AYVKLKQEYKASDVAHKLGML 82
>sp|C5A284|RL23_THEGJ 50S ribosomal protein L23P OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=rpl23p PE=3 SV=1
Length = 86
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%)
Query: 220 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 279
MD + +I PL TE A+ IE N L FIV +A K IK AV++M+++ V KVNTLI
Sbjct: 1 MDPYKVIIRPLVTEKAVSLIEKENKLTFIVDRKATKQDIKRAVEEMFNVKVEKVNTLITM 60
Query: 280 DGKKKAYVRLARDYDALDVANKIGII 305
G+KKAYV+L +Y+A ++A ++G+
Sbjct: 61 KGEKKAYVKLRPEYNASEIAARLGLF 86
>sp|O74095|RL23_PYRHO 50S ribosomal protein L23P OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl23p PE=3 SV=1
Length = 86
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 58/86 (67%)
Query: 220 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 279
MD + +I P+ TE A+ IE N L FIV +A K IK A+++++++ V KVNTLI P
Sbjct: 1 MDPYKVIIRPVVTEKAISLIEKENKLTFIVDRRATKTDIKKAIEEIFNVKVEKVNTLITP 60
Query: 280 DGKKKAYVRLARDYDALDVANKIGII 305
G+KKAYV+L +Y A ++A ++G+
Sbjct: 61 KGEKKAYVKLKPEYSASEIAARLGLF 86
>sp|Q9YFM0|RL23_AERPE 50S ribosomal protein L23P OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl23p
PE=3 SV=2
Length = 86
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 51/73 (69%)
Query: 231 TTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKKAYVRLA 290
TE + +E+ NTL FIV +A K+ +K AV++++ + V KV TLI P G KKAYV+LA
Sbjct: 12 VTEKTTRMLEEENTLTFIVRREATKNDVKRAVEQLFGVKVEKVRTLITPRGYKKAYVKLA 71
Query: 291 RDYDALDVANKIG 303
+Y ALDVA K+G
Sbjct: 72 PEYKALDVATKLG 84
>sp|Q9V1T7|RL23_PYRAB 50S ribosomal protein L23P OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rpl23p PE=3 SV=1
Length = 86
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 58/86 (67%)
Query: 220 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 279
MD + +I P+ T+ A+ IE N L FIV +A K IK A+++++++ V KVNTLI P
Sbjct: 1 MDPYKVIIRPVITDKAISLIEKENKLTFIVDRRATKQDIKRAIEEIFNVKVEKVNTLITP 60
Query: 280 DGKKKAYVRLARDYDALDVANKIGII 305
G+KKAYV+L +Y A ++A ++G+
Sbjct: 61 KGEKKAYVKLKPEYSASEIAARLGLF 86
>sp|Q06842|RL23_HALSA 50S ribosomal protein L23P OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=rpl23p PE=1 SV=3
Length = 84
Score = 71.2 bits (173), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 54/81 (66%)
Query: 224 NIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKK 283
+II YPL TE AM +++ N L FIV + A K I+ V+ YD+ V VNT I P+ +K
Sbjct: 3 SIIDYPLVTEKAMDEMDFQNKLQFIVDIDAAKPEIRDVVESEYDVTVVDVNTQITPEAEK 62
Query: 284 KAYVRLARDYDALDVANKIGI 304
KA V+L+ + DA DVA++IG+
Sbjct: 63 KATVKLSAEDDAQDVASRIGV 83
>sp|Q3IMY6|RL23_NATPD 50S ribosomal protein L23P OS=Natronomonas pharaonis (strain DSM
2160 / ATCC 35678) GN=rpl23p PE=3 SV=1
Length = 82
Score = 70.9 bits (172), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%)
Query: 226 IKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKKA 285
IK+PL TE AM ++ N L F+ H +A K I AAV+ +D+ V +NT +R DG KKA
Sbjct: 3 IKHPLVTEKAMNDMDFENKLQFVCHPEATKGDIAAAVESQFDVEVDSINTQVRMDGDKKA 62
Query: 286 YVRLARDYDALDVANKIGI 304
V L+ D DA +VA++IG+
Sbjct: 63 IVELSADDDAQEVASRIGV 81
>sp|C6A161|RL23_THESM 50S ribosomal protein L23P OS=Thermococcus sibiricus (strain MM 739
/ DSM 12597) GN=rpl23p PE=3 SV=1
Length = 86
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 55/86 (63%)
Query: 220 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 279
MD + +I P+ TE A+ +E N L FIV +A K IK AV+ +Y++ V KVN +I
Sbjct: 1 MDPYKVIVRPVVTEKAISMVERENKLTFIVDKRATKPDIKKAVETVYEVKVDKVNIVITM 60
Query: 280 DGKKKAYVRLARDYDALDVANKIGII 305
G+KKAYV+L +Y A +VA +IG+
Sbjct: 61 KGEKKAYVKLKPEYSASEVAARIGLF 86
>sp|O28356|RL23_ARCFU 50S ribosomal protein L23P OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rpl23p PE=3 SV=1
Length = 83
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 225 IIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKK 284
+IK L TE ++ ++E N L IV ++A K HIK ++K++++ V +VNTLI P G+KK
Sbjct: 4 LIKCFLVTEKSVAELE-KNVLTAIVDMRARKEHIKKEIEKLFNVEVERVNTLITPKGEKK 62
Query: 285 AYVRLARDYDALDVANKIGII 305
AY++L DY A ++ +K+G+
Sbjct: 63 AYIKLKPDYSAEEILSKLGVF 83
>sp|Q8ZW50|RL23_PYRAE 50S ribosomal protein L23P OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rpl23p PE=3 SV=1
Length = 81
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 55/81 (67%)
Query: 225 IIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKK 284
+IK + TE A++ E N + IV A K I V+++Y++ V KVNTLI P G+KK
Sbjct: 1 MIKRIVVTEKALRLAEKENKITLIVDRGATKKQIAEEVERLYNVKVEKVNTLITPRGEKK 60
Query: 285 AYVRLARDYDALDVANKIGII 305
AYV+L ++++A+D+ +K+G++
Sbjct: 61 AYVKLTKEHNAMDLLSKLGVL 81
>sp|Q18GF1|RL23_HALWD 50S ribosomal protein L23P OS=Haloquadratum walsbyi (strain DSM
16790) GN=rpl23p PE=3 SV=1
Length = 84
Score = 66.6 bits (161), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/81 (43%), Positives = 52/81 (64%)
Query: 224 NIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKK 283
++I+YPL TE AM +++ +N L FIV A K I+ ++ Y+I + T I P KK
Sbjct: 3 SLIEYPLVTEKAMDEMDFDNKLQFIVDTDATKDEIENEIESRYEITIIDTKTQITPRAKK 62
Query: 284 KAYVRLARDYDALDVANKIGI 304
KA VRL+ D DA D+A++IG+
Sbjct: 63 KATVRLSDDDDAQDIASRIGV 83
>sp|O26112|RL23_METTH 50S ribosomal protein L23P OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl23p PE=3 SV=2
Length = 86
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 56/86 (65%)
Query: 220 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 279
MD + +I P TE +M I+ NN L F+V ++ K ++ A ++++ + V +VNT + P
Sbjct: 1 MDPYAVIMKPHVTEKSMNLIDQNNELAFVVMRKSTKKDVRRAFEELFAVKVERVNTQVTP 60
Query: 280 DGKKKAYVRLARDYDALDVANKIGII 305
G+K AY++LA+++ A D+A K+G+
Sbjct: 61 RGQKIAYIKLAKEHSAEDIAVKLGVF 86
>sp|P12732|RL23_HALMA 50S ribosomal protein L23P OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rpl23p PE=1
SV=2
Length = 85
Score = 65.9 bits (159), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 222 AFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDG 281
++++IK+P TE AM ++ N L F V +A+K + AV++ YD+ V +VNT DG
Sbjct: 2 SWDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDG 61
Query: 282 KKKAYVRLARDYDALDVANKIGI 304
+KKA VRL+ D DA +VA++IG+
Sbjct: 62 EKKAVVRLSEDDDAQEVASRIGV 84
>sp|A3DNA6|RL23_STAMF 50S ribosomal protein L23P OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rpl23p PE=3 SV=1
Length = 91
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 223 FNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGK 282
+ II P+ +E A+ I+ NTL FIV A+K IK AV+ ++ + V KV TLI G+
Sbjct: 9 YKIIIRPVHSEKALNLIDKENTLTFIVDRNASKKDIKDAVELVFGVKVLKVRTLITSRGE 68
Query: 283 KKAYVRLARDYDALDVANKIGII 305
KKAYV+LA ++ A ++A+++G+I
Sbjct: 69 KKAYVKLAPEHRASEIASQLGLI 91
>sp|A5UL87|RL23_METS3 50S ribosomal protein L23P OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rpl23p PE=3 SV=1
Length = 86
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%)
Query: 220 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 279
MD+++II P TE M I+ NN + F+V ANK IK A +++Y+ VA+V T I P
Sbjct: 1 MDSYSIIIKPHVTEKTMNLIDKNNEITFVVKRDANKGQIKRAFEELYEEKVARVTTHITP 60
Query: 280 DGKKKAYVRLARDYDALDVANKIGII 305
G K A+++L + A ++A KIG+
Sbjct: 61 RGNKVAFIKLVEEEMAEELAVKIGVF 86
>sp|Q97ZQ4|RL23_SULSO 50S ribosomal protein L23P OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rpl23p PE=3 SV=1
Length = 81
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 54/81 (66%)
Query: 225 IIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKK 284
+I+ L TE A+K IE NTL IV K IK +V++++++ V KVN +I P G KK
Sbjct: 1 MIQMALATEKALKLIESYNTLTLIVDKSDTKDDIKKSVERLFNVKVVKVNVVITPQGYKK 60
Query: 285 AYVRLARDYDALDVANKIGII 305
AYV+LA +Y A D+A+K+GI
Sbjct: 61 AYVKLAPEYKASDIAHKLGIF 81
>sp|Q2NFV8|RL23_METST 50S ribosomal protein L23P OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rpl23p PE=3 SV=1
Length = 86
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%)
Query: 220 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 279
MD +++I P +E M +I D N + F+V ANK IK A + +YD V VNT I P
Sbjct: 1 MDPYSVIIKPQLSEKTMNQIYDENKITFVVRRSANKRVIKEAFQDLYDTKVVGVNTHITP 60
Query: 280 DGKKKAYVRLARDYDALDVANKIGII 305
G K A + L A D+A ++G+
Sbjct: 61 RGNKVATIELEEADAAEDIAVRLGVF 86
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.127 0.348
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,747,729
Number of Sequences: 539616
Number of extensions: 5098907
Number of successful extensions: 56331
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1373
Number of HSP's successfully gapped in prelim test: 2063
Number of HSP's that attempted gapping in prelim test: 29976
Number of HSP's gapped (non-prelim): 14179
length of query: 305
length of database: 191,569,459
effective HSP length: 117
effective length of query: 188
effective length of database: 128,434,387
effective search space: 24145664756
effective search space used: 24145664756
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)