BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6375
(86 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P62752|RL23A_RAT 60S ribosomal protein L23a OS=Rattus norvegicus GN=Rpl23a PE=2 SV=1
Length = 156
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/86 (83%), Positives = 80/86 (93%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
+D + IIK+PLTTESAMKKIEDNNTLVFIV ++ANKH IK AVKK+YDI+VAKVNTLIRP
Sbjct: 71 LDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRP 130
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
DG+KKAYVRLA DYDALDVANKIGII
Sbjct: 131 DGEKKAYVRLAPDYDALDVANKIGII 156
>sp|P62751|RL23A_MOUSE 60S ribosomal protein L23a OS=Mus musculus GN=Rpl23a PE=1 SV=1
Length = 156
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/86 (83%), Positives = 80/86 (93%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
+D + IIK+PLTTESAMKKIEDNNTLVFIV ++ANKH IK AVKK+YDI+VAKVNTLIRP
Sbjct: 71 LDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRP 130
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
DG+KKAYVRLA DYDALDVANKIGII
Sbjct: 131 DGEKKAYVRLAPDYDALDVANKIGII 156
>sp|P62750|RL23A_HUMAN 60S ribosomal protein L23a OS=Homo sapiens GN=RPL23A PE=1 SV=1
Length = 156
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/86 (83%), Positives = 80/86 (93%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
+D + IIK+PLTTESAMKKIEDNNTLVFIV ++ANKH IK AVKK+YDI+VAKVNTLIRP
Sbjct: 71 LDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRP 130
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
DG+KKAYVRLA DYDALDVANKIGII
Sbjct: 131 DGEKKAYVRLAPDYDALDVANKIGII 156
>sp|Q24JY1|RL23A_BOVIN 60S ribosomal protein L23a OS=Bos taurus GN=RPL23A PE=2 SV=1
Length = 156
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/86 (83%), Positives = 80/86 (93%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
+D + IIK+PLTTESAMKKIEDNNTLVFIV ++ANKH IK AVKK+YDI+VAKVNTLIRP
Sbjct: 71 LDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRP 130
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
DG+KKAYVRLA DYDALDVANKIGII
Sbjct: 131 DGEKKAYVRLAPDYDALDVANKIGII 156
>sp|Q9AT35|RL23A_DAUCA 60S ribosomal protein L23a OS=Daucus carota GN=RPL23A PE=2 SV=1
Length = 154
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/86 (80%), Positives = 74/86 (86%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
+D + I+KYPLTTESAMKKIEDNNTLVFIV ++ANK IK AVKKMYDI KVNTLIRP
Sbjct: 69 LDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKKIKDAVKKMYDIQTKKVNTLIRP 128
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
DG KKAYVRL DYDALDVANKIGII
Sbjct: 129 DGTKKAYVRLTPDYDALDVANKIGII 154
>sp|Q9M3C3|R23A2_ARATH 60S ribosomal protein L23a-2 OS=Arabidopsis thaliana GN=RPL23AB
PE=2 SV=1
Length = 154
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/86 (79%), Positives = 74/86 (86%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
+D + I+KYPLTTESAMKKIEDNNTLVFIV ++A+K IK AVKKMYDI KVNTLIRP
Sbjct: 69 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVNTLIRP 128
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
DG KKAYVRL DYDALDVANKIGII
Sbjct: 129 DGTKKAYVRLTPDYDALDVANKIGII 154
>sp|P51997|RL25_PUCGR 60S ribosomal protein L25 OS=Puccinia graminis PE=2 SV=2
Length = 158
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 69/86 (80%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
MDA+ + PL TESAMKKIEDNNTL+FIV L+ANK I AVKK+YD+ +VNTLIRP
Sbjct: 73 MDAYRTLVRPLNTESAMKKIEDNNTLLFIVDLKANKRQIADAVKKLYDVTPLRVNTLIRP 132
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
DGKKKA+VRL + DALD+ANKIG I
Sbjct: 133 DGKKKAFVRLTPEVDALDIANKIGFI 158
>sp|Q8LD46|R23A1_ARATH 60S ribosomal protein L23a-1 OS=Arabidopsis thaliana GN=RPL23AA
PE=2 SV=2
Length = 154
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/86 (79%), Positives = 74/86 (86%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
+D + I+KYPLTTESAMKKIEDNNTLVFIV ++A+K IK AVKKMYDI KVNTLIRP
Sbjct: 69 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVNTLIRP 128
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
DG KKAYVRL DYDALDVANKIGII
Sbjct: 129 DGTKKAYVRLTPDYDALDVANKIGII 154
>sp|P41165|RL23A_TRYBB 60S ribosomal protein L23a OS=Trypanosoma brucei brucei GN=RPL23A
PE=2 SV=1
Length = 164
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 69/86 (80%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
DAF II+YPLTT+ AMKKIE+NNTL FIV +ANK IK A++K+Y + KVNTLIRP
Sbjct: 79 WDAFRIIRYPLTTDKAMKKIEENNTLTFIVDSRANKTEIKKAIRKLYQVKTVKVNTLIRP 138
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
DG KKAY+RL+ YDALD ANK+G++
Sbjct: 139 DGLKKAYIRLSASYDALDTANKMGLV 164
>sp|Q07761|RL23A_TOBAC 60S ribosomal protein L23a OS=Nicotiana tabacum GN=RPL23A PE=2 SV=1
Length = 154
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/86 (79%), Positives = 74/86 (86%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
+D + I+KYPLTTESAMKKIEDNNTLVFIV ++A+K IK AVKKMYDI KVNTLIRP
Sbjct: 69 LDQYGILKYPLTTESAMKKIEDNNTLVFIVDIKADKKKIKDAVKKMYDIQTKKVNTLIRP 128
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
DG KKAYVRL DYDALDVANKIGII
Sbjct: 129 DGTKKAYVRLTPDYDALDVANKIGII 154
>sp|O22644|RL23A_FRIAG 60S ribosomal protein L23A OS=Fritillaria agrestis GN=RPL23A PE=2
SV=1
Length = 154
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/86 (79%), Positives = 75/86 (87%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
+D + I+KYPLTTESAMKKIEDNNTLVFIV ++A+K IKAAVKKMYDI KVNTLIRP
Sbjct: 69 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKAAVKKMYDIQTKKVNTLIRP 128
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
DG KKAYVRL DYDALD+ANKIGII
Sbjct: 129 DGTKKAYVRLTPDYDALDIANKIGII 154
>sp|Q20647|R23A2_CAEEL 60S ribosomal protein L23a 2 OS=Caenorhabditis elegans GN=rpl-25.2
PE=3 SV=1
Length = 146
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 70/86 (81%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
+D+F +IK P TTES+MKKIED+NTLVFIV +ANKHHIK AV +Y++ KVNTLI P
Sbjct: 61 LDSFAVIKAPHTTESSMKKIEDHNTLVFIVDEKANKHHIKRAVHALYNVKAVKVNTLITP 120
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
+KKAYVRLA DYDALDVANKIG I
Sbjct: 121 LQQKKAYVRLASDYDALDVANKIGFI 146
>sp|P48162|R23A1_CAEEL 60S ribosomal protein L23a 1 OS=Caenorhabditis elegans GN=rpl-25.1
PE=3 SV=1
Length = 147
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 70/86 (81%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
MD F II++PLTTESAMKKIE++NTLVFIV ANK+ IK AV K+Y++ KVNTLI P
Sbjct: 62 MDHFRIIQHPLTTESAMKKIEEHNTLVFIVSNDANKYQIKDAVHKLYNVQALKVNTLITP 121
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
+KKAYVRL DYDALDVANKIG+I
Sbjct: 122 LQQKKAYVRLTADYDALDVANKIGVI 147
>sp|P48045|RL25_KLULA 60S ribosomal protein L25 OS=Kluyveromyces lactis (strain ATCC 8585
/ CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=RPL25 PE=3 SV=1
Length = 142
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 73/86 (84%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
+D++ +I+ P+T+E+AMKK+ED NTLVF V L+ANK+ IK AVK++Y+++V VNTL+RP
Sbjct: 57 LDSYKVIEQPITSETAMKKVEDGNTLVFKVSLKANKYQIKKAVKELYEVDVLSVNTLVRP 116
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
+G KKAYVRL D+DALD+AN+IG I
Sbjct: 117 NGTKKAYVRLTADFDALDIANRIGYI 142
>sp|P04456|RL25_YEAST 60S ribosomal protein L25 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL25 PE=1 SV=4
Length = 142
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 73/86 (84%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
+D++ +I+ P+T+E+AMKK+ED N LVF V ++ANK+ IK AVK++Y+++V KVNTL+RP
Sbjct: 57 LDSYKVIEQPITSETAMKKVEDGNILVFQVSMKANKYQIKKAVKELYEVDVLKVNTLVRP 116
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
+G KKAYVRL DYDALD+AN+IG I
Sbjct: 117 NGTKKAYVRLTADYDALDIANRIGYI 142
>sp|P08792|RL25_CYBJA 60S ribosomal protein L25 OS=Cyberlindnera jadinii GN=RPL25 PE=3
SV=1
Length = 142
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 69/86 (80%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
+D + +I P+ +E+AMKK+ED NTLVF V ++ANKH IK AVK +Y+++V VNTLIRP
Sbjct: 57 LDNYKVIVAPIASETAMKKVEDGNTLVFQVDIKANKHQIKQAVKDLYEVDVLAVNTLIRP 116
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
+G KKAYVRL D+DALD+ANKIG I
Sbjct: 117 NGTKKAYVRLTADHDALDIANKIGYI 142
>sp|O74391|RL25B_SCHPO 60S ribosomal protein L25-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl25b PE=3 SV=1
Length = 141
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 70/86 (81%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
+D + II P+ +ESAMKKIED+NTLVF VHL+ANK IK AVKK+Y ++ K+NTLIRP
Sbjct: 56 LDEYKIIVNPINSESAMKKIEDDNTLVFHVHLKANKFTIKNAVKKLYSVDAVKINTLIRP 115
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
+G KKA+V+L+ D DALDVAN+IG +
Sbjct: 116 NGTKKAFVKLSADADALDVANRIGFL 141
>sp|Q10330|RL25A_SCHPO 60S ribosomal protein L25-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl25a PE=1 SV=1
Length = 141
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 69/86 (80%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
+D + II P+ +ESAMKKIED+NTLVF VHL+ANK IK AV+K+Y + K+NTLIRP
Sbjct: 56 LDEYKIIVNPINSESAMKKIEDDNTLVFHVHLKANKFTIKEAVRKLYSVEPVKINTLIRP 115
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
+G KKA+V+L+ D DALDVAN+IG +
Sbjct: 116 NGTKKAFVKLSADADALDVANRIGFL 141
>sp|Q54BQ3|RL23A_DICDI 60S ribosomal protein L23a OS=Dictyostelium discoideum GN=rpl23a
PE=1 SV=1
Length = 169
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 66/86 (76%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
MD F I+K PLTTESA +KIE +NT+ F+V + ANK + AV KMYD+ V +VNTLI P
Sbjct: 84 MDQFRILKAPLTTESATQKIEGSNTITFMVDMFANKSQVADAVAKMYDVKVKRVNTLITP 143
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
G+KKA+V L+ +++A DVANKIG+I
Sbjct: 144 RGEKKAFVTLSPEFEAADVANKIGLI 169
>sp|P0DJ57|RL23A_TETTS 60S ribosomal protein L23A OS=Tetrahymena thermophila (strain
SB210) GN=RPL23A PE=1 SV=1
Length = 150
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 64/86 (74%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
+D +++K PLTTE AMKK+ED NT+VF VH ++ K IK+A +K+Y++ V VNTL
Sbjct: 65 LDNHSVVKTPLTTEKAMKKMEDENTMVFYVHNRSTKPQIKSAFEKLYNVKVRSVNTLNTI 124
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
G KKAY+RLA D D+L +ANKIG+I
Sbjct: 125 TGNKKAYIRLAADSDSLTLANKIGLI 150
>sp|P54016|RL23_METJA 50S ribosomal protein L23P OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 /
NBRC 100440) GN=rpl23p PE=3 SV=1
Length = 86
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 60/85 (70%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
MDAF++IK P+ TE ++ IE+ N LVF V +A K IK A+K+++D+ V KVNTLI P
Sbjct: 1 MDAFDVIKAPVVTEKTVRMIEEENKLVFYVDRRATKQDIKRAMKELFDVEVEKVNTLITP 60
Query: 61 DGKKKAYVRLARDYDALDVANKIGI 85
G+KKAYV+L YDA +A +GI
Sbjct: 61 KGEKKAYVKLKEGYDASKIAASLGI 85
>sp|A6VHD4|RL23_METM7 50S ribosomal protein L23P OS=Methanococcus maripaludis (strain
C7 / ATCC BAA-1331) GN=rpl23p PE=3 SV=1
Length = 86
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
MDAF++IK P+ +E MK IE+ N LVF V +A K I+AA+K+++D VA +NT I P
Sbjct: 1 MDAFDVIKTPIVSEKTMKLIEEENRLVFYVERKATKADIRAAIKELFDAEVADINTSITP 60
Query: 61 DGKKKAYVRLARDYDALDVANKIGI 85
GKKKAY+ L +Y+A +VA +GI
Sbjct: 61 KGKKKAYITLKSEYNAGEVAASLGI 85
>sp|A4FVY0|RL23_METM5 50S ribosomal protein L23P OS=Methanococcus maripaludis (strain
C5 / ATCC BAA-1333) GN=rpl23p PE=3 SV=1
Length = 86
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
MDAF++IK P+ +E MK IE+ N LVF V +A K I+AA+K+++D VA +NT I P
Sbjct: 1 MDAFDVIKTPIVSEKTMKLIEEENRLVFYVERKATKADIRAAIKELFDAEVADINTSITP 60
Query: 61 DGKKKAYVRLARDYDALDVANKIGI 85
GKKKAY+ L +Y+A +VA +GI
Sbjct: 61 KGKKKAYITLKAEYNAGEVAASLGI 85
>sp|A6UV66|RL23_META3 50S ribosomal protein L23P OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rpl23p PE=3 SV=1
Length = 86
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 61/85 (71%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
MDAF++IK P+ +E MK IE+ N LVF + +A K +K AVK+++D+ V +NTLI P
Sbjct: 1 MDAFDVIKMPIISEKTMKLIEEENKLVFYIDKKATKTDVKNAVKELFDVEVKDLNTLITP 60
Query: 61 DGKKKAYVRLARDYDALDVANKIGI 85
GKKKAY++L +YDA +VA +GI
Sbjct: 61 KGKKKAYIKLKDEYDAGEVAANLGI 85
>sp|A9A9B6|RL23_METM6 50S ribosomal protein L23P OS=Methanococcus maripaludis (strain
C6 / ATCC BAA-1332) GN=rpl23p PE=3 SV=1
Length = 86
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 59/85 (69%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
MDAF++IK P+ +E MK IE+ N LVF V +A K I AA+K+++D VA +NT I P
Sbjct: 1 MDAFDVIKTPIVSEKTMKLIEEENRLVFYVERKATKADISAAIKELFDAEVADINTSITP 60
Query: 61 DGKKKAYVRLARDYDALDVANKIGI 85
GKKKAY+ L +Y+A +VA +GI
Sbjct: 61 KGKKKAYITLKAEYNAGEVAASLGI 85
>sp|Q9LWB5|RK23_SPIOL 50S ribosomal protein L23, chloroplastic OS=Spinacia oleracea
GN=RPL23 PE=1 SV=1
Length = 198
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 62/86 (72%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
+D + I++ P+ TE+A+K I D N+L+F V ++A+K I+ A+ + + V KVNTLIRP
Sbjct: 109 LDVYQILQSPIITEAAIKNIADENSLLFTVDVRADKKMIREAISNFFGVKVRKVNTLIRP 168
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
DG KKAY+ L ++Y+A ++A KIGI
Sbjct: 169 DGTKKAYIMLNKEYNASELAKKIGIF 194
>sp|Q6LX09|RL23_METMP 50S ribosomal protein L23P OS=Methanococcus maripaludis (strain
S2 / LL) GN=rpl23p PE=3 SV=1
Length = 86
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 60/85 (70%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
MDAF++IK P+ +E MK IE+ N LVF V +A K ++AA+K+++D VA +NT I P
Sbjct: 1 MDAFDVIKTPIVSEKTMKLIEEENRLVFYVERKATKADVRAAIKELFDAEVADINTSITP 60
Query: 61 DGKKKAYVRLARDYDALDVANKIGI 85
GKKKAY+ L +Y+A +VA +GI
Sbjct: 61 KGKKKAYITLKDEYNAGEVAASLGI 85
>sp|P10143|RL23_METVS 50S ribosomal protein L23P OS=Methanococcus vannielii (strain SB
/ ATCC 35089 / DSM 1224) GN=rpl23p PE=1 SV=1
Length = 86
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 61/85 (71%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
MDAF++IK P+ +E MK IE+ N LVF V +A K IK A+K++++ VA+VNT I P
Sbjct: 1 MDAFDVIKTPIVSEKTMKLIEEENRLVFYVERKATKEDIKEAIKQLFNAEVAEVNTNITP 60
Query: 61 DGKKKAYVRLARDYDALDVANKIGI 85
G+KKAY++L +Y+A +VA +GI
Sbjct: 61 KGQKKAYIKLKDEYNAGEVAASLGI 85
>sp|Q8TY92|RL23_METKA 50S ribosomal protein L23P OS=Methanopyrus kandleri (strain AV19
/ DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl23p PE=3
SV=1
Length = 95
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 59/85 (69%)
Query: 2 DAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPD 61
D +++ YP+ TE AM+ +E N L FIV ANK IK AV++++D+ V KVNTLI P
Sbjct: 11 DPHDVLLYPVATEKAMRLMEAENKLTFIVRRDANKPLIKKAVEELFDVEVEKVNTLITPT 70
Query: 62 GKKKAYVRLARDYDALDVANKIGII 86
G+KKAYV+L +Y A DVA +GI+
Sbjct: 71 GEKKAYVKLKPEYRAEDVAVDLGIL 95
>sp|Q5JDH1|RL23_PYRKO 50S ribosomal protein L23P OS=Pyrococcus kodakaraensis (strain
ATCC BAA-918 / JCM 12380 / KOD1) GN=rpl23p PE=3 SV=1
Length = 86
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 59/85 (69%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
MD + +I PL TE A+ IE N L FIV +A K IK AV++M+++ VAKVNTL+
Sbjct: 1 MDPYKVIIRPLVTEKAVSLIERENKLTFIVDRRATKQDIKRAVEEMFNVKVAKVNTLVTM 60
Query: 61 DGKKKAYVRLARDYDALDVANKIGI 85
G+KKAYV+L +YDA ++A ++G+
Sbjct: 61 KGEKKAYVKLKPEYDASEIAARLGL 85
>sp|Q8U000|RL23_PYRFU 50S ribosomal protein L23P OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl23p PE=1 SV=2
Length = 86
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 58/85 (68%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
MD + +I P+ TE A+ IE N L FIV +A K IK AV++++++ V KVNTLI P
Sbjct: 1 MDPYKVIIRPVVTEKAISLIEKENKLTFIVDRRATKQDIKRAVEEIFNVKVEKVNTLITP 60
Query: 61 DGKKKAYVRLARDYDALDVANKIGI 85
G+KKAYV+L +Y A +VA ++G+
Sbjct: 61 RGEKKAYVKLKPEYSASEVAARLGL 85
>sp|B6YSL5|RL23_THEON 50S ribosomal protein L23P OS=Thermococcus onnurineus (strain
NA1) GN=rpl23p PE=3 SV=1
Length = 86
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 57/85 (67%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
MD + +I P+ TE A+ IE+ N L FIV +A K IK AV+ M+D+ V KVNTLI
Sbjct: 1 MDPYKVIIRPVVTEKAVAMIENENKLTFIVDRRATKQDIKRAVEAMFDVKVEKVNTLITM 60
Query: 61 DGKKKAYVRLARDYDALDVANKIGI 85
G+KKAYV+L +Y A ++A +IG+
Sbjct: 61 RGEKKAYVKLKPEYSASEIAARIGL 85
>sp|C5A284|RL23_THEGJ 50S ribosomal protein L23P OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=rpl23p PE=3 SV=1
Length = 86
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 58/85 (68%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
MD + +I PL TE A+ IE N L FIV +A K IK AV++M+++ V KVNTLI
Sbjct: 1 MDPYKVIIRPLVTEKAVSLIEKENKLTFIVDRKATKQDIKRAVEEMFNVKVEKVNTLITM 60
Query: 61 DGKKKAYVRLARDYDALDVANKIGI 85
G+KKAYV+L +Y+A ++A ++G+
Sbjct: 61 KGEKKAYVKLRPEYNASEIAARLGL 85
>sp|O74095|RL23_PYRHO 50S ribosomal protein L23P OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl23p PE=3 SV=1
Length = 86
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 58/85 (68%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
MD + +I P+ TE A+ IE N L FIV +A K IK A+++++++ V KVNTLI P
Sbjct: 1 MDPYKVIIRPVVTEKAISLIEKENKLTFIVDRRATKTDIKKAIEEIFNVKVEKVNTLITP 60
Query: 61 DGKKKAYVRLARDYDALDVANKIGI 85
G+KKAYV+L +Y A ++A ++G+
Sbjct: 61 KGEKKAYVKLKPEYSASEIAARLGL 85
>sp|Q975I3|RL23_SULTO 50S ribosomal protein L23P OS=Sulfolobus tokodaii (strain DSM
16993 / JCM 10545 / NBRC 100140 / 7) GN=rpl23p PE=3
SV=1
Length = 82
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 60/81 (74%)
Query: 6 IIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKK 65
IIK LTTE A+K IE NTL IV+ +A K IK ++KM+++ V KVNTLI G+KK
Sbjct: 2 IIKEFLTTEKAIKLIESQNTLTVIVNKEATKADIKREIEKMFNVKVDKVNTLITIRGEKK 61
Query: 66 AYVRLARDYDALDVANKIGII 86
AYV+L ++++A D+A+++GI+
Sbjct: 62 AYVKLKKEFNASDIAHRLGIL 82
>sp|Q4JB42|RL23_SULAC 50S ribosomal protein L23P OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=rpl23p PE=3 SV=1
Length = 82
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 56/81 (69%)
Query: 6 IIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKK 65
IIK L TE A+K IE NTL IV+ K IK V+K++ + V K+NTLI P G+KK
Sbjct: 2 IIKEFLATEKAVKLIESQNTLTIIVNRNTTKKDIKNEVEKLFSVKVEKINTLITPKGEKK 61
Query: 66 AYVRLARDYDALDVANKIGII 86
AYV+L ++Y A DVA+K+G++
Sbjct: 62 AYVKLKQEYKASDVAHKLGML 82
>sp|Q9YFM0|RL23_AERPE 50S ribosomal protein L23P OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=rpl23p PE=3 SV=2
Length = 86
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 52/74 (70%)
Query: 13 TESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKKAYVRLAR 72
TE + +E+ NTL FIV +A K+ +K AV++++ + V KV TLI P G KKAYV+LA
Sbjct: 13 TEKTTRMLEEENTLTFIVRREATKNDVKRAVEQLFGVKVEKVRTLITPRGYKKAYVKLAP 72
Query: 73 DYDALDVANKIGII 86
+Y ALDVA K+G +
Sbjct: 73 EYKALDVATKLGAV 86
>sp|Q9V1T7|RL23_PYRAB 50S ribosomal protein L23P OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rpl23p PE=3 SV=1
Length = 86
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 58/85 (68%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
MD + +I P+ T+ A+ IE N L FIV +A K IK A+++++++ V KVNTLI P
Sbjct: 1 MDPYKVIIRPVITDKAISLIEKENKLTFIVDRRATKQDIKRAIEEIFNVKVEKVNTLITP 60
Query: 61 DGKKKAYVRLARDYDALDVANKIGI 85
G+KKAYV+L +Y A ++A ++G+
Sbjct: 61 KGEKKAYVKLKPEYSASEIAARLGL 85
>sp|Q3IMY6|RL23_NATPD 50S ribosomal protein L23P OS=Natronomonas pharaonis (strain DSM
2160 / ATCC 35678) GN=rpl23p PE=3 SV=1
Length = 82
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%)
Query: 7 IKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKKA 66
IK+PL TE AM ++ N L F+ H +A K I AAV+ +D+ V +NT +R DG KKA
Sbjct: 3 IKHPLVTEKAMNDMDFENKLQFVCHPEATKGDIAAAVESQFDVEVDSINTQVRMDGDKKA 62
Query: 67 YVRLARDYDALDVANKIGII 86
V L+ D DA +VA++IG+
Sbjct: 63 IVELSADDDAQEVASRIGVF 82
>sp|Q06842|RL23_HALSA 50S ribosomal protein L23P OS=Halobacterium salinarum (strain
ATCC 700922 / JCM 11081 / NRC-1) GN=rpl23p PE=1 SV=3
Length = 84
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 54/81 (66%)
Query: 5 NIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKK 64
+II YPL TE AM +++ N L FIV + A K I+ V+ YD+ V VNT I P+ +K
Sbjct: 3 SIIDYPLVTEKAMDEMDFQNKLQFIVDIDAAKPEIRDVVESEYDVTVVDVNTQITPEAEK 62
Query: 65 KAYVRLARDYDALDVANKIGI 85
KA V+L+ + DA DVA++IG+
Sbjct: 63 KATVKLSAEDDAQDVASRIGV 83
>sp|C6A161|RL23_THESM 50S ribosomal protein L23P OS=Thermococcus sibiricus (strain MM
739 / DSM 12597) GN=rpl23p PE=3 SV=1
Length = 86
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
MD + +I P+ TE A+ +E N L FIV +A K IK AV+ +Y++ V KVN +I
Sbjct: 1 MDPYKVIVRPVVTEKAISMVERENKLTFIVDKRATKPDIKKAVETVYEVKVDKVNIVITM 60
Query: 61 DGKKKAYVRLARDYDALDVANKIGI 85
G+KKAYV+L +Y A +VA +IG+
Sbjct: 61 KGEKKAYVKLKPEYSASEVAARIGL 85
>sp|P12732|RL23_HALMA 50S ribosomal protein L23P OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rpl23p
PE=1 SV=2
Length = 85
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%)
Query: 3 AFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDG 62
++++IK+P TE AM ++ N L F V +A+K + AV++ YD+ V +VNT DG
Sbjct: 2 SWDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDG 61
Query: 63 KKKAYVRLARDYDALDVANKIGII 86
+KKA VRL+ D DA +VA++IG+
Sbjct: 62 EKKAVVRLSEDDDAQEVASRIGVF 85
>sp|Q18GF1|RL23_HALWD 50S ribosomal protein L23P OS=Haloquadratum walsbyi (strain DSM
16790) GN=rpl23p PE=3 SV=1
Length = 84
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%)
Query: 5 NIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKK 64
++I+YPL TE AM +++ +N L FIV A K I+ ++ Y+I + T I P KK
Sbjct: 3 SLIEYPLVTEKAMDEMDFDNKLQFIVDTDATKDEIENEIESRYEITIIDTKTQITPRAKK 62
Query: 65 KAYVRLARDYDALDVANKIGI 85
KA VRL+ D DA D+A++IG+
Sbjct: 63 KATVRLSDDDDAQDIASRIGV 83
>sp|O28356|RL23_ARCFU 50S ribosomal protein L23P OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rpl23p PE=3 SV=1
Length = 83
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Query: 6 IIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKK 65
+IK L TE ++ ++E N L IV ++A K HIK ++K++++ V +VNTLI P G+KK
Sbjct: 4 LIKCFLVTEKSVAELE-KNVLTAIVDMRARKEHIKKEIEKLFNVEVERVNTLITPKGEKK 62
Query: 66 AYVRLARDYDALDVANKIGI 85
AY++L DY A ++ +K+G+
Sbjct: 63 AYIKLKPDYSAEEILSKLGV 82
>sp|Q8ZW50|RL23_PYRAE 50S ribosomal protein L23P OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rpl23p PE=3 SV=1
Length = 81
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 55/81 (67%)
Query: 6 IIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKK 65
+IK + TE A++ E N + IV A K I V+++Y++ V KVNTLI P G+KK
Sbjct: 1 MIKRIVVTEKALRLAEKENKITLIVDRGATKKQIAEEVERLYNVKVEKVNTLITPRGEKK 60
Query: 66 AYVRLARDYDALDVANKIGII 86
AYV+L ++++A+D+ +K+G++
Sbjct: 61 AYVKLTKEHNAMDLLSKLGVL 81
>sp|O26112|RL23_METTH 50S ribosomal protein L23P OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl23p PE=3 SV=2
Length = 86
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 56/86 (65%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
MD + +I P TE +M I+ NN L F+V ++ K ++ A ++++ + V +VNT + P
Sbjct: 1 MDPYAVIMKPHVTEKSMNLIDQNNELAFVVMRKSTKKDVRRAFEELFAVKVERVNTQVTP 60
Query: 61 DGKKKAYVRLARDYDALDVANKIGII 86
G+K AY++LA+++ A D+A K+G+
Sbjct: 61 RGQKIAYIKLAKEHSAEDIAVKLGVF 86
>sp|A3DNA6|RL23_STAMF 50S ribosomal protein L23P OS=Staphylothermus marinus (strain
ATCC 43588 / DSM 3639 / F1) GN=rpl23p PE=3 SV=1
Length = 91
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 4 FNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGK 63
+ II P+ +E A+ I+ NTL FIV A+K IK AV+ ++ + V KV TLI G+
Sbjct: 9 YKIIIRPVHSEKALNLIDKENTLTFIVDRNASKKDIKDAVELVFGVKVLKVRTLITSRGE 68
Query: 64 KKAYVRLARDYDALDVANKIGII 86
KKAYV+LA ++ A ++A+++G+I
Sbjct: 69 KKAYVKLAPEHRASEIASQLGLI 91
>sp|A5UL87|RL23_METS3 50S ribosomal protein L23P OS=Methanobrevibacter smithii (strain
PS / ATCC 35061 / DSM 861) GN=rpl23p PE=3 SV=1
Length = 86
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
MD+++II P TE M I+ NN + F+V ANK IK A +++Y+ VA+V T I P
Sbjct: 1 MDSYSIIIKPHVTEKTMNLIDKNNEITFVVKRDANKGQIKRAFEELYEEKVARVTTHITP 60
Query: 61 DGKKKAYVRLARDYDALDVANKIGI 85
G K A+++L + A ++A KIG+
Sbjct: 61 RGNKVAFIKLVEEEMAEELAVKIGV 85
>sp|Q97ZQ4|RL23_SULSO 50S ribosomal protein L23P OS=Sulfolobus solfataricus (strain
ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=rpl23p PE=3
SV=1
Length = 81
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 54/81 (66%)
Query: 6 IIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRPDGKKK 65
+I+ L TE A+K IE NTL IV K IK +V++++++ V KVN +I P G KK
Sbjct: 1 MIQMALATEKALKLIESYNTLTLIVDKSDTKDDIKKSVERLFNVKVVKVNVVITPQGYKK 60
Query: 66 AYVRLARDYDALDVANKIGII 86
AYV+LA +Y A D+A+K+GI
Sbjct: 61 AYVKLAPEYKASDIAHKLGIF 81
>sp|Q2NFV8|RL23_METST 50S ribosomal protein L23P OS=Methanosphaera stadtmanae (strain
DSM 3091) GN=rpl23p PE=3 SV=1
Length = 86
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%)
Query: 1 MDAFNIIKYPLTTESAMKKIEDNNTLVFIVHLQANKHHIKAAVKKMYDINVAKVNTLIRP 60
MD +++I P +E M +I D N + F+V ANK IK A + +YD V VNT I P
Sbjct: 1 MDPYSVIIKPQLSEKTMNQIYDENKITFVVRRSANKRVIKEAFQDLYDTKVVGVNTHITP 60
Query: 61 DGKKKAYVRLARDYDALDVANKIGI 85
G K A + L A D+A ++G+
Sbjct: 61 RGNKVATIELEEADAAEDIAVRLGV 85
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,907,722
Number of Sequences: 539616
Number of extensions: 915519
Number of successful extensions: 3136
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 2614
Number of HSP's gapped (non-prelim): 565
length of query: 86
length of database: 191,569,459
effective HSP length: 56
effective length of query: 30
effective length of database: 161,350,963
effective search space: 4840528890
effective search space used: 4840528890
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)