BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6380
(103 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q29RK2|PYC_BOVIN Pyruvate carboxylase, mitochondrial OS=Bos taurus GN=PC PE=2 SV=2
Length = 1178
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 45/61 (73%)
Query: 42 GKRMPPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVL 101
G+ + PV AYL+ P+II +A NVDA+HPGYGFLSER DFA+A A + FIGP+ V+
Sbjct: 87 GRGLAPVQAYLHIPDIIKVAKENNVDAVHPGYGFLSERADFAQACQDAGVRFIGPSPEVV 146
Query: 102 K 102
+
Sbjct: 147 R 147
>sp|P11498|PYC_HUMAN Pyruvate carboxylase, mitochondrial OS=Homo sapiens GN=PC PE=1 SV=2
Length = 1178
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 45/61 (73%)
Query: 42 GKRMPPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVL 101
G+ + PV AYL+ P+II +A NVDA+HPGYGFLSER DFA+A A + FIGP+ V+
Sbjct: 87 GRGLAPVQAYLHIPDIIKVAKENNVDAVHPGYGFLSERADFAQACQDAGVRFIGPSPEVV 146
Query: 102 K 102
+
Sbjct: 147 R 147
>sp|O17732|PYC1_CAEEL Pyruvate carboxylase 1 OS=Caenorhabditis elegans GN=pyc-1 PE=1 SV=1
Length = 1175
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 26 SKRKLEDSSLWLLRDQGKRMPPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKA 85
S +L+ +L+ GK +PPVAAYL +II A N+DAIHPGYGFLSER DFA A
Sbjct: 69 SMHRLKADEAYLV---GKGLPPVAAYLTIDQIIETALKHNIDAIHPGYGFLSERSDFAAA 125
Query: 86 VIGAALEFIGPTTNVL 101
A + FIGP+ +V+
Sbjct: 126 CQNAGIVFIGPSPDVM 141
>sp|Q05920|PYC_MOUSE Pyruvate carboxylase, mitochondrial OS=Mus musculus GN=Pc PE=1 SV=1
Length = 1178
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 44/61 (72%)
Query: 42 GKRMPPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVL 101
G+ + PV AYL+ P+II +A VDA+HPGYGFLSER DFA+A A + FIGP+ V+
Sbjct: 87 GRGLAPVQAYLHIPDIIKVAKENGVDAVHPGYGFLSERADFAQACQDAGVRFIGPSPEVV 146
Query: 102 K 102
+
Sbjct: 147 R 147
>sp|P52873|PYC_RAT Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus GN=Pc PE=1
SV=2
Length = 1178
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 44/61 (72%)
Query: 42 GKRMPPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVL 101
G+ + PV AYL+ P+II +A VDA+HPGYGFLSER DFA+A A + FIGP+ V+
Sbjct: 87 GRGLAPVQAYLHIPDIIKVAKENGVDAVHPGYGFLSERADFAQACQDAGVRFIGPSPEVV 146
Query: 102 K 102
+
Sbjct: 147 R 147
>sp|P32327|PYC2_YEAST Pyruvate carboxylase 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PYC2 PE=1 SV=2
Length = 1180
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 25 LSKRKLEDSSLWLLRDQGKRMPPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAK 84
LS +L+ +++ ++G+ PV AYL EII IA VD IHPGYGFLSE +FA
Sbjct: 56 LSMHRLKADEAYVIGEEGQ-YTPVGAYLAMDEIIEIAKKHKVDFIHPGYGFLSENSEFAD 114
Query: 85 AVIGAALEFIGPTTNVLKT 103
V+ A + +IGP V+ +
Sbjct: 115 KVVKAGITWIGPPAEVIDS 133
>sp|P43873|ACCC_HAEIN Biotin carboxylase OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=accC PE=3 SV=1
Length = 448
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 36/57 (63%)
Query: 46 PPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLK 102
P +YLN P II A DAIHPGYGFLSE DFA+ V + FIGPT +V++
Sbjct: 55 PSAKSYLNIPAIIAAAEVTGADAIHPGYGFLSENADFAEQVERSGFTFIGPTADVIR 111
>sp|P11154|PYC1_YEAST Pyruvate carboxylase 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PYC1 PE=1 SV=2
Length = 1178
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 25 LSKRKLEDSSLWLLRDQGKRMPPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAK 84
LS K + +++ + G+ PV AYL EII IA VD IHPGYGFLSE +FA
Sbjct: 55 LSTHKQKADEAYVIGEVGQ-YTPVGAYLAIDEIISIAQKHQVDFIHPGYGFLSENSEFAD 113
Query: 85 AVIGAALEFIGPTTNVLKT 103
V+ A + +IGP V+ +
Sbjct: 114 KVVKAGITWIGPPAEVIDS 132
>sp|Q58626|PYCA_METJA Pyruvate carboxylase subunit A OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=pycA PE=1 SV=1
Length = 501
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 37/58 (63%)
Query: 46 PPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLKT 103
P +YLN I+ +A VDAIHPGYGFL+E +FA+AV A EFIGP + ++
Sbjct: 55 PAAKSYLNIDAILNVAEKAKVDAIHPGYGFLAENAEFARAVKKAGFEFIGPNPDAIEA 112
>sp|Q8X1T3|PYC_PICAN Pyruvate carboxylase OS=Pichia angusta GN=PYC PE=3 SV=1
Length = 1175
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 25 LSKRKLEDSSLWLLRDQGKRMPPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAK 84
LS +L+ +++ +G+ PV AYL EII IA NV IHPGYGFLSE +FA+
Sbjct: 59 LSMHRLKADEAYVIGARGQ-YSPVQAYLQIDEIINIALEHNVSMIHPGYGFLSENSEFAR 117
Query: 85 AVIGAALEFIGPTTNVL 101
V + + +IGP NV+
Sbjct: 118 KVEDSGMIWIGPPHNVI 134
>sp|O93918|PYC_ASPTE Pyruvate carboxylase OS=Aspergillus terreus GN=pyc PE=2 SV=1
Length = 1193
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 25 LSKRKLEDSSLWLLRDQGKRMPPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAK 84
LS + + +++ +G+ PV AYL EI+ IA V IHPGYGFLSE DFA+
Sbjct: 78 LSMHRQKADEAYMIGHRGQ-YTPVGAYLAADEIVKIALEHGVHLIHPGYGFLSENADFAR 136
Query: 85 AVIGAALEFIGPTTNVLKT 103
V A + F+GPT + + +
Sbjct: 137 KVEKAGMVFVGPTPDTIDS 155
>sp|Q0CLK1|PYC_ASPTN Pyruvate carboxylase OS=Aspergillus terreus (strain NIH 2624 / FGSC
A1156) GN=pyc PE=3 SV=2
Length = 1193
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 25 LSKRKLEDSSLWLLRDQGKRMPPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAK 84
LS + + +++ +G+ PV AYL EI+ IA V IHPGYGFLSE DFA+
Sbjct: 78 LSMHRQKADEAYMIGHRGQ-YTPVGAYLAADEIVKIALEHGVHLIHPGYGFLSENADFAR 136
Query: 85 AVIGAALEFIGPTTNVLKT 103
V A + F+GPT + + +
Sbjct: 137 KVEKAGMVFVGPTPDTIDS 155
>sp|Q9UUE1|PYC_SCHPO Pyruvate carboxylase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pyr1 PE=3 SV=1
Length = 1185
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 47 PVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLKT 103
PV AYL EI+ IA + +HPGYGFLSE +FA+ V A ++F+GP+ V+ +
Sbjct: 90 PVGAYLAIDEIVSIAKRTGANLVHPGYGFLSENAEFARKVNEAGMQFVGPSPEVIDS 146
>sp|Q9KDS9|ACCC_BACHD Biotin carboxylase OS=Bacillus halodurans (strain ATCC BAA-125 /
DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=accC PE=3
SV=1
Length = 452
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 46 PPVA-AYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLK 102
PPVA +YL I+ +A VDAIHPGYG LSE FA+A + A + FIGP+ V++
Sbjct: 54 PPVAESYLKVDTILEVAKQAGVDAIHPGYGLLSENARFARACVEAGISFIGPSPEVIE 111
>sp|P38095|LAMA_EMENI Putative urea carboxylase OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=lamA PE=2
SV=2
Length = 1241
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 34/52 (65%)
Query: 46 PPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPT 97
PP AY++ +II IA DAI PGYGFLSE +FA+ V A L F+GP+
Sbjct: 56 PPSKAYIDGDQIIDIAKRKGADAIIPGYGFLSENSNFARDVASAGLAFVGPS 107
>sp|Q9HES8|PYC_ASPNG Pyruvate carboxylase OS=Aspergillus niger GN=pyc PE=3 SV=1
Length = 1192
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 25 LSKRKLEDSSLWLLRDQGKRMPPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAK 84
LS + + +++ +G+ PV AYL EI+ IA V IHPGYGFLSE +FA+
Sbjct: 77 LSMHRQKADEAYMIGKRGQ-YTPVGAYLAIDEIVKIALEHGVHLIHPGYGFLSENAEFAR 135
Query: 85 AVIGAALEFIGPTTNVLKT 103
V + + F+GPT +++
Sbjct: 136 KVEQSGMVFVGPTPQTIES 154
>sp|P78992|PYC_PICPA Pyruvate carboxylase OS=Komagataella pastoris GN=PYC1 PE=3 SV=1
Length = 1189
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 25 LSKRKLEDSSLWLLRDQGKRMPPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAK 84
LS +L+ +++ ++G+ PV AYL EII IA NV+ IHPGYGF SE +FA+
Sbjct: 58 LSMHRLKADEAYVIGERGQ-YSPVQAYLAIDEIIKIAVKHNVNMIHPGYGFCSENSEFAR 116
Query: 85 AVIGAALEFIGPTTNVL 101
V + ++GP+ V+
Sbjct: 117 KVEENGILWVGPSDTVI 133
>sp|O52058|ACCC_ALLVD Biotin carboxylase OS=Allochromatium vinosum (strain ATCC 17899 /
DSM 180 / NBRC 103801 / D) GN=accC PE=3 SV=2
Length = 449
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 34/57 (59%)
Query: 46 PPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLK 102
P + +YLN P II A + AIHPGYGFLSE DFA+ V + FIGP ++
Sbjct: 58 PAMQSYLNVPAIISAAEVTDTVAIHPGYGFLSENADFAERVEKSGFIFIGPRPETIR 114
>sp|P37798|ACCC_PSEAE Biotin carboxylase OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=accC PE=1 SV=1
Length = 449
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 46 PPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLK 102
P +YL P II A AIHPGYGFL+E DFA+ + + F+GPT V++
Sbjct: 55 PATQSYLQIPAIIAAAEVTGATAIHPGYGFLAENADFAEQIERSGFTFVGPTAEVIR 111
>sp|Q42777|MCCA_SOYBN Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
OS=Glycine max GN=MCCA PE=1 SV=2
Length = 731
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 40 DQGKRM-PPVA--AYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGP 96
D+ R+ PP A +YLN I+ A AIHPGYGFLSE DFAK + L FIGP
Sbjct: 77 DEAIRIGPPPARLSYLNGASIVDAAIRSGAQAIHPGYGFLSESADFAKLCEESGLTFIGP 136
Query: 97 TTNVLK 102
+ ++
Sbjct: 137 PASAIR 142
>sp|Q9KWU4|PYC_BACSU Pyruvate carboxylase OS=Bacillus subtilis (strain 168) GN=pyc PE=3
SV=1
Length = 1148
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 35/60 (58%)
Query: 42 GKRMPPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVL 101
G+ P+ AYL+ II IA VDAIHPGYGFLSE FA+ + FIGP + L
Sbjct: 56 GEGKKPIDAYLDIEGIIDIAKRNKVDAIHPGYGFLSENIHFARRCEEEGIVFIGPKSEHL 115
>sp|Q8X9B6|ACCC_ECO57 Biotin carboxylase OS=Escherichia coli O157:H7 GN=accC PE=3 SV=1
Length = 449
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%)
Query: 46 PPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLK 102
P V +YLN P II A AIHPGYGFLSE +FA+ V + FIGP ++
Sbjct: 55 PSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETIR 111
>sp|P24182|ACCC_ECOLI Biotin carboxylase OS=Escherichia coli (strain K12) GN=accC PE=1
SV=2
Length = 449
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%)
Query: 46 PPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLK 102
P V +YLN P II A AIHPGYGFLSE +FA+ V + FIGP ++
Sbjct: 55 PSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETIR 111
>sp|Q2QMG2|MCCA_ORYSJ Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
OS=Oryza sativa subsp. japonica GN=MCCA PE=2 SV=2
Length = 737
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 40 DQGKRM-PPVA--AYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGP 96
D+ R+ PP A +YLN I+ A AIHPGYGFLSE DFA+ L FIGP
Sbjct: 83 DEAVRLGPPPARESYLNASAIVDAALRTGAKAIHPGYGFLSESADFAQLCKAEGLTFIGP 142
Query: 97 TTNVLK 102
+ ++
Sbjct: 143 PPSAIR 148
>sp|D3DJ42|2OCS_HYDTT 2-oxoglutarate carboxylase small subunit OS=Hydrogenobacter
thermophilus (strain DSM 6534 / IAM 12695 / TK-6)
GN=cfiB PE=1 SV=1
Length = 472
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 47 PVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLK 102
P+ YLN I+ +A + +AIHPGYGFL+E E FA+ + FIGP V++
Sbjct: 55 PLDTYLNAERIVDLALEVGAEAIHPGYGFLAENEHFARLCEEKGITFIGPHWKVIE 110
>sp|Q06862|ACCC_NOSS1 Biotin carboxylase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=accC PE=3 SV=1
Length = 447
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 31/53 (58%)
Query: 50 AYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLK 102
+YLN P II A N AIHPGYGFLSE FA+ + FIGPT ++
Sbjct: 60 SYLNIPNIIAAALTRNASAIHPGYGFLSENAKFAEICADHHIAFIGPTPEAIR 112
>sp|P46392|BCCA_MYCLE Acetyl-/propionyl-coenzyme A carboxylase alpha chain
OS=Mycobacterium leprae (strain TN) GN=bccA PE=3 SV=2
Length = 598
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 50 AYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLK 102
+YL+ +I+ A +AIHPGYGFL+E DFA+AVI A L +IGP+ ++
Sbjct: 66 SYLDFGKILDAAAKSGANAIHPGYGFLAENADFAQAVIDAGLIWIGPSPQSIR 118
>sp|P14882|PCCA_RAT Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus
norvegicus GN=Pcca PE=1 SV=3
Length = 737
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 46 PPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLK 102
P +YLN I+ A+HPGYGFLSE ++FAK + + FIGP T+ ++
Sbjct: 125 PTSKSYLNMDAIMEAIKKTGAQAVHPGYGFLSENKEFAKCLAAEDVTFIGPDTHAIQ 181
>sp|Q42523|MCCA_ARATH Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
OS=Arabidopsis thaliana GN=MCCA PE=1 SV=2
Length = 734
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 40 DQGKRM-PPVA--AYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGP 96
D+ R+ PP A +YL+ I+ A AIHPGYGFLSE DFA+ + L FIGP
Sbjct: 82 DEAVRIGPPSARLSYLSGVTIMEAAARTGAQAIHPGYGFLSESSDFAQLCEDSGLTFIGP 141
Query: 97 TTNVLK 102
+ ++
Sbjct: 142 PASAIR 147
>sp|O30019|PYCA_ARCFU Pyruvate carboxylase subunit A OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=pycA PE=3 SV=1
Length = 506
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 47 PVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLK 102
P +YLN II +A +AIHPGYGFL+E +FA+ + FIGP+ V++
Sbjct: 56 PRDSYLNIDRIIEVAKKSGAEAIHPGYGFLAENAEFAERCEEEGIVFIGPSPEVIR 111
>sp|Q91ZA3|PCCA_MOUSE Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Mus
musculus GN=Pcca PE=2 SV=2
Length = 724
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 46 PPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLK 102
P +YLN I+ A+HPGYGFLSE ++FAK + + FIGP T+ ++
Sbjct: 112 PTSKSYLNMDAIMEAIKKTRAQAVHPGYGFLSENKEFAKRLAAEDVTFIGPDTHAIQ 168
>sp|P32528|DUR1_YEAST Urea amidolyase OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=DUR1,2 PE=1 SV=2
Length = 1835
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 51 YLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLK 102
YL+ +II A N AI PGYGFLSE DF+ A A + F+GP+ ++++
Sbjct: 691 YLDMNKIIDAAKQTNAQAIIPGYGFLSENADFSDACTSAGITFVGPSGDIIR 742
>sp|P49787|ACCC1_BACSU Biotin carboxylase 1 OS=Bacillus subtilis (strain 168) GN=accC1
PE=3 SV=3
Length = 450
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 50 AYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVL 101
+YLN I+ +A DAIHPGYGFL+E DFA+ + F+GP+ + +
Sbjct: 59 SYLNVTNIVSVAKLTGTDAIHPGYGFLAENADFAELCEEVNVTFVGPSADAI 110
>sp|P05165|PCCA_HUMAN Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Homo
sapiens GN=PCCA PE=1 SV=4
Length = 728
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 46 PPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLK 102
P +YLN I+ A+HPGYGFLSE ++FA+ + + FIGP T+ ++
Sbjct: 116 PTSKSYLNMDAIMEAIKKTRAQAVHPGYGFLSENKEFARCLAAEDVVFIGPDTHAIQ 172
>sp|Q54KE6|MCCA_DICDI Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=mccA PE=3 SV=1
Length = 699
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 38 LRDQGKRMPPVAA---YLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFI 94
+ D+ + P AA YL +II +A AIHPGYGFLSE DFA + FI
Sbjct: 72 MADESYLIGPAAAKESYLCGNKIIDVAKRSGAQAIHPGYGFLSENSDFADLCEREGIIFI 131
Query: 95 GPTTNVLK 102
GP ++ +K
Sbjct: 132 GPPSDAIK 139
>sp|Q99MR8|MCCA_MOUSE Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Mus
musculus GN=Mccc1 PE=2 SV=2
Length = 717
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 46 PPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLK 102
P +YL +II +A + AIHPGYGFLSE +FA+ + FIGP ++ ++
Sbjct: 98 PSQQSYLAMEKIIQVAKSSAAQAIHPGYGFLSENMEFAELCKQEGIIFIGPPSSAIR 154
>sp|Q5I0C3|MCCA_RAT Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
OS=Rattus norvegicus GN=Mccc1 PE=1 SV=1
Length = 715
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 46 PPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLK 102
P +YL +II +A + AIHPGYGFLSE +FA+ + FIGP + ++
Sbjct: 98 PSQQSYLAMEKIIQVAKSSAAQAIHPGYGFLSENMEFAEFCKQEGIIFIGPPSTAIR 154
>sp|Q19842|PCCA_CAEEL Propionyl-CoA carboxylase alpha chain, mitochondrial
OS=Caenorhabditis elegans GN=pcca-1 PE=1 SV=1
Length = 724
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%)
Query: 46 PPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVL 101
P +YL I+ + A+HPGYGFLSE FA + A +FIGP + +
Sbjct: 102 PTAKSYLRADRILQAVEDTGAQAVHPGYGFLSENTKFAAELEKAGAKFIGPNSKAI 157
>sp|Q612F5|PCCA_CAEBR Propionyl-CoA carboxylase alpha chain, mitochondrial
OS=Caenorhabditis briggsae GN=pcca-1 PE=3 SV=1
Length = 738
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%)
Query: 46 PPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVL 101
P +YL I+ + A+HPGYGFLSE FA + A +FIGP + +
Sbjct: 116 PTAKSYLRVDRILQAVEDTGAQAVHPGYGFLSENTKFAAELEKAGAKFIGPNSKAI 171
>sp|P0A508|BCCA_MYCTU Acetyl-/propionyl-coenzyme A carboxylase alpha chain
OS=Mycobacterium tuberculosis GN=accA1 PE=1 SV=1
Length = 654
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 32 DSSLWLLRDQGKRMPPVAA---YLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIG 88
D+ L D R+ P A YL+ +++ A AIHPGYGFL+E DFA A
Sbjct: 38 DARHVLEADAAVRLGPAPARESYLDIGKVLDAAARTGAQAIHPGYGFLAENADFAAACER 97
Query: 89 AALEFIGPTTNVLK 102
A + F+GP ++
Sbjct: 98 ARVVFLGPPARAIE 111
>sp|P0A509|BCCA_MYCBO Acetyl-/propionyl-coenzyme A carboxylase alpha chain
OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
GN=accA1 PE=3 SV=1
Length = 654
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 32 DSSLWLLRDQGKRMPPVAA---YLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIG 88
D+ L D R+ P A YL+ +++ A AIHPGYGFL+E DFA A
Sbjct: 38 DARHVLEADAAVRLGPAPARESYLDIGKVLDAAARTGAQAIHPGYGFLAENADFAAACER 97
Query: 89 AALEFIGPTTNVLK 102
A + F+GP ++
Sbjct: 98 ARVVFLGPPARAIE 111
>sp|A5H0J2|DUR1_LACKL Urea amidolyase OS=Lachancea kluyveri GN=DUR1,2 PE=3 SV=1
Length = 1830
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 51 YLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLK 102
YL+ +II A + N AI PGYGFLSE +FA + + F+GP+ ++
Sbjct: 684 YLDIDKIIKAAKDTNAQAIIPGYGFLSENAEFADKCVEEGIVFVGPSGEAIR 735
>sp|Q96RQ3|MCCA_HUMAN Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
OS=Homo sapiens GN=MCCC1 PE=1 SV=3
Length = 725
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 46 PPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLK 102
P +YL+ +II +A AIHPG GFLSE +FA+ + FIGP + ++
Sbjct: 102 PSQQSYLSMEKIIQVAKTSAAQAIHPGCGFLSENMEFAELCKQEGIIFIGPPPSAIR 158
>sp|O27939|PYCA_METTH Pyruvate carboxylase subunit A OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pycA PE=1 SV=1
Length = 491
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 47 PVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLKT 103
P +YL I+ +A +AIHPGYGFL+E + ++ IGP +V++
Sbjct: 56 PSQSYLRIDRILEVAEKAGAEAIHPGYGFLAENPRLGEECEKQGIKLIGPKGSVIEA 112
>sp|B9HBA8|ACCC1_POPTR Biotin carboxylase 1, chloroplastic OS=Populus trichocarpa
GN=POPTRDRAFT_831870 PE=2 SV=1
Length = 528
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 29 KLEDSSLWLLRDQGKRMPPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIG 88
KL D S+ + P +YL P ++ A + +HPGYGFL+E F +
Sbjct: 106 KLADESVCI-----GEAPSSQSYLVIPNVLSAAISRRCTMLHPGYGFLAENAVFVEMCRE 160
Query: 89 AALEFIGPTTNVLK 102
+ FIGP + ++
Sbjct: 161 HGINFIGPNPDSIR 174
>sp|O04983|ACCC_ARATH Biotin carboxylase, chloroplastic OS=Arabidopsis thaliana GN=CAC2
PE=1 SV=1
Length = 537
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 46 PPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVLK 102
P +YL P ++ A + +HPGYGFLSE F + + FIGP + ++
Sbjct: 127 PSNQSYLVIPNVLSAAISRGCTMLHPGYGFLSENALFVEMCRDHGINFIGPNPDSIR 183
>sp|B9N843|ACCC2_POPTR Biotin carboxylase 2, chloroplastic OS=Populus trichocarpa
GN=POPTRDRAFT_673504 PE=2 SV=1
Length = 526
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 29 KLEDSSLWLLRDQGKRMPPVAAYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIG 88
KL D S+ + P +YL ++ A + +HPGYGFL+E F +
Sbjct: 108 KLADESVCI-----GEAPSNQSYLVIQNVLSAAISRGCTMLHPGYGFLAENAVFVEMCRE 162
Query: 89 AALEFIGPTTNVLK 102
+ FIGP + ++
Sbjct: 163 HGINFIGPNPDSIR 176
>sp|O34544|ACCC2_BACSU Biotin carboxylase 2 OS=Bacillus subtilis (strain 168) GN=accC2
PE=3 SV=1
Length = 444
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%)
Query: 50 AYLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGPTTNVL 101
+YLN II A DAIHPGYG LSE FA+ + FIGP+ +++
Sbjct: 59 SYLNIERIIKTAKKAKADAIHPGYGLLSENSRFAERCKQENIVFIGPSPDII 110
>sp|B9FK36|ACC2_ORYSJ Acetyl-CoA carboxylase 2 OS=Oryza sativa subsp. japonica GN=ACC2
PE=3 SV=2
Length = 2327
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 51 YLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGP 96
Y N I+ IA V A+ PG+G SE + A+ + F+GP
Sbjct: 204 YANVQLIVEIAERTGVSAVWPGWGHASENPELPDALTAKGIVFLGP 249
>sp|Q38970|ACC1_ARATH Acetyl-CoA carboxylase 1 OS=Arabidopsis thaliana GN=ACC1 PE=1 SV=1
Length = 2254
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 51 YLNNPEIICIANNINVDAIHPGYGFLSEREDFAKAVIGAALEFIGP 96
Y N I+ +A VDA+ PG+G SE + A+ + F+GP
Sbjct: 106 YANVQLIVEMAEVTRVDAVWPGWGHASENPELPDALDAKGIIFLGP 151
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,801,136
Number of Sequences: 539616
Number of extensions: 1429587
Number of successful extensions: 3085
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3022
Number of HSP's gapped (non-prelim): 68
length of query: 103
length of database: 191,569,459
effective HSP length: 72
effective length of query: 31
effective length of database: 152,717,107
effective search space: 4734230317
effective search space used: 4734230317
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)