RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy6382
         (125 letters)



>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase
           {Leishmania major [TaxId: 5664]}
          Length = 340

 Score = 24.5 bits (51), Expect = 4.2
 Identities = 6/23 (26%), Positives = 10/23 (43%)

Query: 97  VRELYQKIAECYEFPAEEVQFGA 119
             +  + I E  E P  +V F +
Sbjct: 37  CAKAARLIGELLERPDADVHFIS 59


>d1eg7a_ c.37.1.10 (A:) Formyltetrahydrofolate synthetase {Moorella
           thermoacetica [TaxId: 1525]}
          Length = 549

 Score = 23.6 bits (51), Expect = 9.0
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 23  VSLLGEIFTMPLFTRKPKKDDHLLDNN 49
           V + G I TMP   ++P   +  +D +
Sbjct: 518 VPITGAIMTMPGLPKRPAACNIDIDAD 544


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.316    0.136    0.401 

Gapped
Lambda     K      H
   0.267   0.0631    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 446,091
Number of extensions: 18583
Number of successful extensions: 40
Number of sequences better than 10.0: 1
Number of HSP's gapped: 40
Number of HSP's successfully gapped: 6
Length of query: 125
Length of database: 2,407,596
Length adjustment: 75
Effective length of query: 50
Effective length of database: 1,377,846
Effective search space: 68892300
Effective search space used: 68892300
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 48 (22.5 bits)