Query psy6385
Match_columns 137
No_of_seqs 133 out of 152
Neff 4.2
Searched_HMMs 13730
Date Sat Aug 17 01:06:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6385.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/6385hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1whua_ a.4.9.1 (A:) Polynucle 62.3 6.4 0.00047 25.7 4.9 54 18-77 12-66 (104)
2 d1m0ua1 a.45.1.1 (A:123-249) C 35.1 11 0.0008 23.6 2.4 49 40-88 55-113 (127)
3 d1k8kb1 c.55.1.1 (B:154-343) A 32.8 3.7 0.00027 28.5 -0.4 35 87-121 142-176 (190)
4 d1e3ha1 a.4.9.1 (A:263-345) Po 32.0 50 0.0036 19.9 5.5 23 100-122 31-53 (83)
5 d1f5na1 a.114.1.1 (A:284-583) 29.5 40 0.0029 23.4 5.0 45 26-70 16-60 (300)
6 d2nrka1 d.218.1.14 (A:4-170) H 29.4 29 0.0021 23.9 4.1 46 61-114 113-158 (167)
7 d1ez3a_ a.47.2.1 (A:) Syntaxin 27.9 68 0.005 20.3 11.2 56 73-128 42-113 (124)
8 d2fgea1 d.185.1.1 (A:540-797) 27.4 97 0.0071 21.9 8.1 66 51-119 178-246 (258)
9 d2f1ka1 a.100.1.12 (A:166-279) 27.4 48 0.0035 21.3 4.8 37 31-67 55-91 (114)
10 d2g5ca1 a.100.1.12 (A:201-310) 25.8 60 0.0044 20.7 5.0 37 31-67 53-89 (110)
11 d2f6mb1 a.2.17.2 (B:15-118) Va 25.2 28 0.002 23.1 3.2 62 7-79 22-85 (104)
12 d2f23a1 a.2.1.1 (A:3-77) GreA 22.9 53 0.0039 20.2 4.1 32 57-89 8-40 (75)
13 d2ff4a2 a.118.8.3 (A:105-283) 22.6 1E+02 0.0073 20.4 7.1 63 69-132 92-155 (179)
14 d1ylxa1 d.82.5.1 (A:1-100) Hyp 21.9 23 0.0016 23.6 2.1 20 106-125 6-25 (100)
15 d1b5ta_ c.1.23.1 (A:) Methylen 21.7 60 0.0043 23.7 4.8 33 2-35 194-226 (275)
16 d1aisb1 a.74.1.2 (B:1108-1205) 21.4 35 0.0026 20.9 2.9 47 2-51 3-61 (98)
17 d2au5a1 a.244.1.1 (A:1-132) Hy 20.2 59 0.0043 22.2 4.1 42 68-110 80-121 (132)
18 d2jdia1 a.69.1.1 (A:380-510) F 20.0 92 0.0067 20.3 5.1 28 56-83 79-106 (131)
No 1
>d1whua_ a.4.9.1 (A:) Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=62.28 E-value=6.4 Score=25.75 Aligned_cols=54 Identities=15% Similarity=0.215 Sum_probs=38.1
Q ss_pred CCChHHHHHHHhcCCCCchhHHHHHHHHHHH-hHHHhhHHHHHHHHHHHHHHHHHhhchHH
Q psy6385 18 IHVPLEVFDYIDQGRNPQLYTKDCIEKALTK-NEQVKGKIDAYRKFKAHMLVELSGAFPNE 77 (137)
Q Consensus 18 i~IPlEVl~yID~GrNPDiYTrefvE~~~~~-Nq~~kGK~~a~~~fR~~L~~el~~~FPel 77 (137)
+..|.+|.++|.+ +..+-|+.+... +.--.-+-+++..+++.+.++|.+.||+.
T Consensus 12 f~~~eel~~~V~~------~~~~ki~~a~~~~~~dK~eR~~al~~ik~ei~~~l~e~~~~~ 66 (104)
T d1whua_ 12 FTPSAEIVKYTKI------IAMEKLYAVFTDYEHDKVSRDEAVNKIRLDTEEHLKEKFPEV 66 (104)
T ss_dssp CCCCHHHHHHHHH------HHHHHHHHHHSSCCSCSHHHHHHHHHHHHHHHHHHTTTCSSS
T ss_pred CCCCHHHHHHHHH------HHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 4578888898874 444566666531 22223456788999999999999999974
No 2
>d1m0ua1 a.45.1.1 (A:123-249) Class sigma GST {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=35.05 E-value=11 Score=23.63 Aligned_cols=49 Identities=10% Similarity=0.122 Sum_probs=30.1
Q ss_pred HHHHHHHHHhH-HHhhH---------HHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhh
Q psy6385 40 DCIEKALTKNE-QVKGK---------IDAYRKFKAHMLVELSGAFPNELAKYRAIREKA 88 (137)
Q Consensus 40 efvE~~~~~Nq-~~kGK---------~~a~~~fR~~L~~el~~~FPel~~~y~~irera 88 (137)
..+|+.+++|. +.-|. ..++..++..+...+.+.||.+.+-|..+.+..
T Consensus 55 ~~le~~L~~~~~fl~G~~~T~aD~~l~~~l~~~~~~~~~~~~~~~P~L~~~~~rv~~~P 113 (127)
T d1m0ua1 55 EKLEQTVKDNDGHLALGKLTWADVYFAGITDYMNYMVKRDLLEPYPALRGVVDAVNALE 113 (127)
T ss_dssp HHHHHHHHHTTSSSBTTBCCHHHHHHHHHHHHHHHHHTSCTTTTCHHHHHHHHHHHTSH
T ss_pred HHHHHHHhcCCCcccCCcccHHHHHHHHHHHHHHHHcCcchhhcChHHHHHHHHHHcCH
Confidence 45677776653 56554 233444454455556677888888887777654
No 3
>d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=32.76 E-value=3.7 Score=28.49 Aligned_cols=35 Identities=14% Similarity=0.227 Sum_probs=32.1
Q ss_pred hhhhhhhhccchHHHHHHHHHHHHHHHHhhChHHH
Q psy6385 87 KALTKNEQVKGKIDAYRKFKAHMLVELSGAFPNEL 121 (137)
Q Consensus 87 raLakN~~~~gk~~~~~~~r~~l~~el~~~fp~~~ 121 (137)
+.|..|=.+-|=+-++.+|..+|.+||.+.+|+.+
T Consensus 142 ~~L~~NIvl~GG~Sl~pGf~~RL~~EL~~l~p~~~ 176 (190)
T d1k8kb1 142 SEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERV 176 (190)
T ss_dssp HHHHTTCEEESGGGCSTTHHHHHHHHHHHHHHHHT
T ss_pred HHHHcCEEEECcccCCCCHHHHHHHHHHHhhhHhh
Confidence 57888999999999999999999999999999854
No 4
>d1e3ha1 a.4.9.1 (A:263-345) Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 {Streptomyces antibioticus [TaxId: 1890]}
Probab=31.95 E-value=50 Score=19.95 Aligned_cols=23 Identities=17% Similarity=0.114 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHhhChHHHH
Q psy6385 100 DAYRKFKAHMLVELSGAFPNELA 122 (137)
Q Consensus 100 ~~~~~~r~~l~~el~~~fp~~~~ 122 (137)
+++..++.-+++.|...+|+...
T Consensus 31 ~al~~lk~~~~e~~~~~~~~~~~ 53 (83)
T d1e3ha1 31 AELDRVKALAAEKLLPEFEGREK 53 (83)
T ss_dssp HHHHHHHHHHHHHTTTTSTTCHH
T ss_pred HHHHHHHHHHHHHhccccchhHH
Confidence 45667788888888888887543
No 5
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.49 E-value=40 Score=23.43 Aligned_cols=45 Identities=16% Similarity=0.149 Sum_probs=30.8
Q ss_pred HHHhcCCCCchhHHHHHHHHHHHhHHHhhHHHHHHHHHHHHHHHH
Q psy6385 26 DYIDQGRNPQLYTKDCIEKALTKNEQVKGKIDAYRKFKAHMLVEL 70 (137)
Q Consensus 26 ~yID~GrNPDiYTrefvE~~~~~Nq~~kGK~~a~~~fR~~L~~el 70 (137)
.|||.=.+|.+=+-+-.=.+..+++..++--+|+..|...+...+
T Consensus 16 ~yv~ain~g~~P~i~~~~~~~~~~e~~~a~e~a~~~Y~~~m~~~~ 60 (300)
T d1f5na1 16 TYVNAISSGDLPCMENAVLALAQIENSAAVQKAIAHYEQQMGQKV 60 (300)
T ss_dssp HHHHHHHHTSCCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 455554445555555566667777888888888888888876654
No 6
>d2nrka1 d.218.1.14 (A:4-170) Hypothetical protein GrpB {Enterococcus faecalis [TaxId: 1351]}
Probab=29.45 E-value=29 Score=23.92 Aligned_cols=46 Identities=15% Similarity=0.297 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhhchHHHHHHHHHHhhhhhhhhhccchHHHHHHHHHHHHHHHH
Q psy6385 61 KFKAHMLVELSGAFPNELAKYRAIREKALTKNEQVKGKIDAYRKFKAHMLVELS 114 (137)
Q Consensus 61 ~fR~~L~~el~~~FPel~~~y~~ireraLakN~~~~gk~~~~~~~r~~l~~el~ 114 (137)
.|||.|. +.|++...|.+++.+.-.++. +..+.|..-|.-.++++.
T Consensus 113 ~FRD~Lr-----~~p~~~~~Y~~lK~~la~~~~---~d~~~Y~~~K~~fi~~il 158 (167)
T d2nrka1 113 AFRNYLR-----ENPAIATTYGTLKKQLAQAHP---DSIDKYMDGKDAFIKKIE 158 (167)
T ss_dssp HHHHHHH-----HCHHHHHHHHHHHHHHHTTCS---SCHHHHC--CHHHHHHHH
T ss_pred HHHHHHc-----CCHHHHHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHHH
Confidence 6888885 679999999999976655543 245566666665555543
No 7
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=27.91 E-value=68 Score=20.26 Aligned_cols=56 Identities=13% Similarity=0.226 Sum_probs=37.5
Q ss_pred hchHHHHHHHHHHhhhhhhhhhccchHHHHH----------------HHHHHHHHHHHhhChHHHHHHhHhh
Q psy6385 73 AFPNELAKYRAIREKALTKNEQVKGKIDAYR----------------KFKAHMLVELSGAFPNELAKYRAIR 128 (137)
Q Consensus 73 ~FPel~~~y~~ireraLakN~~~~gk~~~~~----------------~~r~~l~~el~~~fp~~~~~yr~ir 128 (137)
..++.......+......+...++++++.++ ..|+-...=|...|=+.|..|..++
T Consensus 42 ~~~~~~~~l~~~~~~i~~~a~~ik~~Lk~l~~~~~~~~~~~~~s~~~Rir~~q~~~L~~kf~e~m~~yq~~q 113 (124)
T d1ez3a_ 42 PDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQ 113 (124)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555666666666666666666666666663 2466667777777878888887664
No 8
>d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=27.36 E-value=97 Score=21.87 Aligned_cols=66 Identities=11% Similarity=0.214 Sum_probs=47.2
Q ss_pred HHhhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhhhhhhh-h--ccchHHHHHHHHHHHHHHHHhhChH
Q psy6385 51 QVKGKIDAYRKFKAHMLVELSGAFPNELAKYRAIREKALTKNE-Q--VKGKIDAYRKFKAHMLVELSGAFPN 119 (137)
Q Consensus 51 ~~kGK~~a~~~fR~~L~~el~~~FPel~~~y~~ireraLakN~-~--~~gk~~~~~~~r~~l~~el~~~fp~ 119 (137)
.+.| +..++-+++ |.+.+.+...++.+...+|+..-+.++. . +.|.-+.+..+.++ ++.+-+..|.
T Consensus 178 ~~~G-l~~~~~l~~-l~~~~e~~~~~l~~~L~~i~~~i~~~~~l~v~it~d~~~~~~~~~~-l~~f~~~Lp~ 246 (258)
T d2fgea1 178 QMGG-LSYLEFLHT-LEKKVDEDWEGISSSLEEIRRSLLARNGCIVNMTADGKSLTNVEKS-VAKFLDLLPE 246 (258)
T ss_dssp HHHS-HHHHHHHHH-HHHHHHHCHHHHHHHHHHHHHHHCCSTTCEEEEEECHHHHHHHHHH-HHHHHHTSCS
T ss_pred HHhc-HHHHHHHHH-HHHHhhhhHHHHHHHHHHHHHHHcCCCCcEEEEEeCHHHHHHHHHH-HHHHHHhCCC
Confidence 3444 445555554 5567788888999999999988887654 2 47888888888876 5666666664
No 9
>d2f1ka1 a.100.1.12 (A:166-279) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=27.35 E-value=48 Score=21.26 Aligned_cols=37 Identities=14% Similarity=0.079 Sum_probs=22.8
Q ss_pred CCCCchhHHHHHHHHHHHhHHHhhHHHHHHHHHHHHH
Q psy6385 31 GRNPQLYTKDCIEKALTKNEQVKGKIDAYRKFKAHML 67 (137)
Q Consensus 31 GrNPDiYTrefvE~~~~~Nq~~kGK~~a~~~fR~~L~ 67 (137)
+-||++|+-=|.+..-.=-+....-++.+..||+.|.
T Consensus 55 ~s~p~mW~dI~~~N~~~i~~~l~~~~~~L~~l~~~l~ 91 (114)
T d2f1ka1 55 GGNPELGTMMATYNQRALLKSLQDYRQHLDQLITLIS 91 (114)
T ss_dssp GSCHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999976766543333444455555555555554
No 10
>d2g5ca1 a.100.1.12 (A:201-310) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}
Probab=25.79 E-value=60 Score=20.73 Aligned_cols=37 Identities=11% Similarity=0.234 Sum_probs=24.3
Q ss_pred CCCCchhHHHHHHHHHHHhHHHhhHHHHHHHHHHHHH
Q psy6385 31 GRNPQLYTKDCIEKALTKNEQVKGKIDAYRKFKAHML 67 (137)
Q Consensus 31 GrNPDiYTrefvE~~~~~Nq~~kGK~~a~~~fR~~L~ 67 (137)
|.||++|+-=|......=......-++.+..|++.|.
T Consensus 53 ~s~p~mW~dI~~~N~~~i~~~l~~~~~~L~~~~~~l~ 89 (110)
T d2g5ca1 53 KSDPIMWRDIFLENKENVMKAIEGFEKSLNHLKELIV 89 (110)
T ss_dssp CSCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999877766555444555555555666666554
No 11
>d2f6mb1 a.2.17.2 (B:15-118) Vacuolar protein sorting-associated protein 28, VPS28 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.16 E-value=28 Score=23.14 Aligned_cols=62 Identities=16% Similarity=0.191 Sum_probs=38.8
Q ss_pred hHHhhhhhcCCCCChHHHHH--HHhcCCCCchhHHHHHHHHHHHhHHHhhHHHHHHHHHHHHHHHHHhhchHHHH
Q psy6385 7 EIDKLKSQVQDIHVPLEVFD--YIDQGRNPQLYTKDCIEKALTKNEQVKGKIDAYRKFKAHMLVELSGAFPNELA 79 (137)
Q Consensus 7 ~ld~~k~~~~~i~IPlEVl~--yID~GrNPDiYTrefvE~~~~~Nq~~kGK~~a~~~fR~~L~~el~~~FPel~~ 79 (137)
..|.++.-+ .|-+-+|-++ ||.+.-.+.-||..|.....+=.-. |++...+.+...||++.+
T Consensus 22 ~yd~LAely-sII~tLe~LEkAyikD~It~~eYt~~c~rLl~QyK~~----------~~~~~~~~v~~~f~~le~ 85 (104)
T d2f6mb1 22 VIETLSEIY-SIVITLDHVEKAYLKDSIDDTQYTNTVDKLLKQFKVY----------LNSQNKEEINKHFQSIEA 85 (104)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHH----------HTCTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHH----------HHHhhhHHhhhccCCHHH
Confidence 345666655 3666777775 9999999999999996654322111 111223567777877543
No 12
>d2f23a1 a.2.1.1 (A:3-77) GreA transcript cleavage protein, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=22.88 E-value=53 Score=20.19 Aligned_cols=32 Identities=6% Similarity=0.077 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHhhchHHHHHHHHHHh-hhh
Q psy6385 57 DAYRKFKAHMLVELSGAFPNELAKYRAIRE-KAL 89 (137)
Q Consensus 57 ~a~~~fR~~L~~el~~~FPel~~~y~~ire-raL 89 (137)
++|+++++.|.. +....|+........|+ |.|
T Consensus 8 eg~~kL~~EL~~-l~~~r~ei~~~I~eAr~~GDl 40 (75)
T d2f23a1 8 AGYERLMQQLER-ERERLQEATKILQELMESSDD 40 (75)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHHHH-HHhhHHHHHHHHHHHHHhCcc
Confidence 688999999975 89999999999998886 444
No 13
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=22.63 E-value=1e+02 Score=20.39 Aligned_cols=63 Identities=16% Similarity=0.119 Sum_probs=47.3
Q ss_pred HHHhhchHHHHHHHHHHhhhhhhhhhccchHHHHHHHHHHHHHHHHhhCh-HHHHHHhHhhCCCC
Q psy6385 69 ELSGAFPNELAKYRAIREKALTKNEQVKGKIDAYRKFKAHMLVELSGAFP-NELAKYRAIRGGDE 132 (137)
Q Consensus 69 el~~~FPel~~~y~~ireraLakN~~~~gk~~~~~~~r~~l~~el~~~fp-~~~~~yr~ir~~~~ 132 (137)
.+-+.-|.-...|..+ .+++.+......=+..|..+++.|-+||+-.-. +-...|+.|...++
T Consensus 92 ~al~~~P~~e~~~~~l-~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~~~l~~l~~~il~~~~ 155 (179)
T d2ff4a2 92 ALTFEHPYREPLWTQL-ITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALNERILRQQP 155 (179)
T ss_dssp HHHHHSTTCHHHHHHH-HHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTTCC
T ss_pred HHHHhCCccHHHHHHH-HHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHhCCC
Confidence 3444667666555554 478888888888899999999999999988754 45577899876554
No 14
>d1ylxa1 d.82.5.1 (A:1-100) Hypothetical protein, GK1464 ortholog {Bacillus stearothermophilus [TaxId: 1422]}
Probab=21.90 E-value=23 Score=23.59 Aligned_cols=20 Identities=10% Similarity=0.278 Sum_probs=18.2
Q ss_pred HHHHHHHHHhhChHHHHHHh
Q psy6385 106 KAHMLVELSGAFPNELAKYR 125 (137)
Q Consensus 106 r~~l~~el~~~fp~~~~~yr 125 (137)
|+.+|+||-..||.-|+.|-
T Consensus 6 R~~ii~e~~~s~e~~me~Yg 25 (100)
T d1ylxa1 6 RSVVIEEFIDTLEPMMEAYG 25 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhHHHHHHhC
Confidence 78899999999999999883
No 15
>d1b5ta_ c.1.23.1 (A:) Methylenetetrahydrofolate reductase {Escherichia coli [TaxId: 562]}
Probab=21.66 E-value=60 Score=23.66 Aligned_cols=33 Identities=12% Similarity=0.308 Sum_probs=26.6
Q ss_pred chhhhhHHhhhhhcCCCCChHHHHHHHhcCCCCc
Q psy6385 2 ISGLQEIDKLKSQVQDIHVPLEVFDYIDQGRNPQ 35 (137)
Q Consensus 2 V~~Lq~ld~~k~~~~~i~IPlEVl~yID~GrNPD 35 (137)
+.+++.+.+++ .+..+.||.++++.++...++.
T Consensus 194 ~~s~~~l~~~~-~~~Gv~iP~~~~~~~~~~~~~~ 226 (275)
T d1b5ta_ 194 VSNFKQAKKFA-DMTNVRIPAWMAQMFDGLDDDA 226 (275)
T ss_dssp CSCHHHHHHHH-HTTTCCCCHHHHHHHTTCTTCH
T ss_pred hHHHHHHHHHH-HHcCCcccHHHHHHHhhcCCCH
Confidence 45677788886 4779999999999999877653
No 16
>d1aisb1 a.74.1.2 (B:1108-1205) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=21.38 E-value=35 Score=20.86 Aligned_cols=47 Identities=21% Similarity=0.322 Sum_probs=33.1
Q ss_pred chhhhhHHhhhhhcCCCCChHHHHHH------------HhcCCCCchhHHHHHHHHHHHhHH
Q psy6385 2 ISGLQEIDKLKSQVQDIHVPLEVFDY------------IDQGRNPQLYTKDCIEKALTKNEQ 51 (137)
Q Consensus 2 V~~Lq~ld~~k~~~~~i~IPlEVl~y------------ID~GrNPDiYTrefvE~~~~~Nq~ 51 (137)
...+++|+++.+.+ .+|..|.+- +-.||+|.-..--||=.+-+.|..
T Consensus 3 ~~a~~~I~~~~~~L---~L~~~i~~~A~~i~k~~~~~~~~~g~~~~~iaaA~iY~Acr~~~~ 61 (98)
T d1aisb1 3 AFALSELDRITAQL---KLPRHVEEEAARLYREAVRKGLIRGRSIESVMAACVYAACRLLKV 61 (98)
T ss_dssp HHHHHHHHHHHHHH---TCCHHHHHHHHHHHHHHHTTTTTTTCCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHc---CcCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHcCC
Confidence 46788999999866 468887761 124888888777777766666543
No 17
>d2au5a1 a.244.1.1 (A:1-132) Hypothetical protein EF2947 {Enterococcus faecalis [TaxId: 1351]}
Probab=20.21 E-value=59 Score=22.20 Aligned_cols=42 Identities=26% Similarity=0.428 Sum_probs=35.3
Q ss_pred HHHHhhchHHHHHHHHHHhhhhhhhhhccchHHHHHHHHHHHH
Q psy6385 68 VELSGAFPNELAKYRAIREKALTKNEQVKGKIDAYRKFKAHML 110 (137)
Q Consensus 68 ~el~~~FPel~~~y~~ireraLakN~~~~gk~~~~~~~r~~l~ 110 (137)
++|..+|--+..-|...|.+.|+.|+. +=..+.+.||-..||
T Consensus 80 ~~L~~E~~~Li~LY~~~~~~~LT~N~~-~L~~~i~DKF~~LLL 121 (132)
T d2au5a1 80 EQLKGELARLIRLYFALAKDNLTENQE-SLYVDLFDKFTFLLL 121 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCHHHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccch-hhhhhHHHHHHHHHH
Confidence 456667777889999999999999976 568899999999887
No 18
>d2jdia1 a.69.1.1 (A:380-510) F1 ATP synthase alpha subunit, domain 3 {Cow (Bos taurus) [TaxId: 9913]}
Probab=20.05 E-value=92 Score=20.32 Aligned_cols=28 Identities=21% Similarity=0.252 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHhhchHHHHHHHH
Q psy6385 56 IDAYRKFKAHMLVELSGAFPNELAKYRA 83 (137)
Q Consensus 56 ~~a~~~fR~~L~~el~~~FPel~~~y~~ 83 (137)
++-+..|.+.|.+.+....|++.+..+.
T Consensus 79 v~~I~~fe~~ll~~l~~~~~~~l~~I~~ 106 (131)
T d2jdia1 79 PSKITKFENAFLSHVISQHQALLGKIRT 106 (131)
T ss_dssp GGGHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 4556889999999999999998877654
Done!