Your job contains 1 sequence.
>psy6386
MIIHILNHLGEYSKFISSFRQTMISGLQEIDKLKSQVQDIHVPLEVFDYIDQGRNPQLYT
KDCIEKALTKNEQVKGKIDAYRKFKAHMLVELSGAFPNELAKYRAIRGGDETPPSY
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6386
(116 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1S049 - symbol:MED10 "Uncharacterized protein"... 332 4.9e-30 1
UNIPROTKB|Q3ZCF2 - symbol:MED10 "Mediator of RNA polymera... 330 7.9e-30 1
UNIPROTKB|Q9BTT4 - symbol:MED10 "Mediator of RNA polymera... 330 7.9e-30 1
MGI|MGI:106331 - symbol:Med10 "mediator of RNA polymerase... 330 7.9e-30 1
RGD|1310128 - symbol:Med10 "mediator complex subunit 10" ... 330 7.9e-30 1
UNIPROTKB|E1BVD0 - symbol:MED10 "Uncharacterized protein"... 328 1.3e-29 1
UNIPROTKB|F1PPU6 - symbol:MED10 "Uncharacterized protein"... 328 1.3e-29 1
ZFIN|ZDB-GENE-070117-2423 - symbol:med10 "mediator of RNA... 324 3.4e-29 1
FB|FBgn0036581 - symbol:MED10 "Mediator complex subunit 1... 316 2.4e-28 1
WB|WBGene00007014 - symbol:mdt-10 species:6239 "Caenorhab... 232 1.9e-19 1
TAIR|locus:2165680 - symbol:MED10A species:3702 "Arabidop... 180 6.2e-14 1
DICTYBASE|DDB_G0290209 - symbol:med10 "putative mediator ... 175 2.1e-13 1
TAIR|locus:505006147 - symbol:AT1G26665 species:3702 "Ara... 175 2.1e-13 1
UNIPROTKB|G4N033 - symbol:MGG_05314 "Uncharacterized prot... 122 8.7e-08 1
CGD|CAL0003598 - symbol:MED10 species:5476 "Candida albic... 119 1.8e-07 1
POMBASE|SPBC31F10.09c - symbol:nut2 "mediator complex sub... 119 1.8e-07 1
SGD|S000006372 - symbol:NUT2 "Subunit of the RNA polymera... 114 6.1e-07 1
>UNIPROTKB|F1S049 [details] [associations]
symbol:MED10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0016592 "mediator complex"
evidence=IEA] [GO:0001104 "RNA polymerase II transcription cofactor
activity" evidence=IEA] InterPro:IPR019145 Pfam:PF09748
GO:GO:0045944 GO:GO:0016592 GO:GO:0001104 KO:K15151
GeneTree:ENSGT00390000014501 OMA:QDVHVPL EMBL:CU915407
RefSeq:XP_003134205.1 UniGene:Ssc.3332 Ensembl:ENSSSCT00000018624
GeneID:100518225 KEGG:ssc:100518225 Uniprot:F1S049
Length = 135
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 61/93 (65%), Positives = 79/93 (84%)
Query: 23 MISGLQEIDKLKSQVQDIHVPLEVFDYIDQGRNPQLYTKDCIEKALTKNEQVKGKIDAYR 82
+++GLQ+IDK + Q+ DI VPLEVF+YIDQGRNPQLYTK+C+E+AL KNEQVKGKID +
Sbjct: 44 IVTGLQDIDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTMK 103
Query: 83 KFKAHMLVELSGAFPNELAKYRAIRGGDETPPS 115
KFK+ ++ ELS FP ++AKYR+IRG D+ PPS
Sbjct: 104 KFKSLLIQELSKVFPEDMAKYRSIRGEDQ-PPS 135
>UNIPROTKB|Q3ZCF2 [details] [associations]
symbol:MED10 "Mediator of RNA polymerase II transcription
subunit 10" species:9913 "Bos taurus" [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0016592 "mediator complex" evidence=IEA] [GO:0001104 "RNA
polymerase II transcription cofactor activity" evidence=IEA]
InterPro:IPR019145 Pfam:PF09748 GO:GO:0045944 GO:GO:0016592
GO:GO:0001104 eggNOG:NOG245504 KO:K15151 EMBL:BC102439
IPI:IPI00691412 RefSeq:NP_001029928.1 UniGene:Bt.58898
ProteinModelPortal:Q3ZCF2 STRING:Q3ZCF2 Ensembl:ENSBTAT00000010690
GeneID:614276 KEGG:bta:614276 CTD:84246
GeneTree:ENSGT00390000014501 HOGENOM:HOG000006789
HOVERGEN:HBG107408 InParanoid:Q3ZCF2 OMA:QDVHVPL OrthoDB:EOG4TF0MK
NextBio:20899028 Uniprot:Q3ZCF2
Length = 135
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 61/93 (65%), Positives = 78/93 (83%)
Query: 23 MISGLQEIDKLKSQVQDIHVPLEVFDYIDQGRNPQLYTKDCIEKALTKNEQVKGKIDAYR 82
+++GLQ+IDK + Q+ DI VPLEVF+YIDQGRNPQLYTK+C+E+AL KNEQVKGKID +
Sbjct: 44 IVTGLQDIDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTMK 103
Query: 83 KFKAHMLVELSGAFPNELAKYRAIRGGDETPPS 115
KFK+ ++ ELS FP ++AKYR+IRG D PPS
Sbjct: 104 KFKSLLIQELSKVFPEDMAKYRSIRGEDH-PPS 135
>UNIPROTKB|Q9BTT4 [details] [associations]
symbol:MED10 "Mediator of RNA polymerase II transcription
subunit 10" species:9606 "Homo sapiens" [GO:0001104 "RNA polymerase
II transcription cofactor activity" evidence=IEA] [GO:0016592
"mediator complex" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] Reactome:REACT_71
InterPro:IPR019145 Pfam:PF09748 Reactome:REACT_111045 GO:GO:0005654
GO:GO:0045944 GO:GO:0006367 EMBL:CH471102 GO:GO:0016592
GO:GO:0001104 eggNOG:NOG245504 KO:K15151 CTD:84246
HOGENOM:HOG000006789 HOVERGEN:HBG107408 OMA:QDVHVPL
OrthoDB:EOG4TF0MK EMBL:AY598325 EMBL:AY277599 EMBL:AY453397
EMBL:FJ515848 EMBL:BC003353 IPI:IPI00030481 RefSeq:NP_115662.2
UniGene:Hs.13885 ProteinModelPortal:Q9BTT4 IntAct:Q9BTT4
MINT:MINT-1379304 STRING:Q9BTT4 PhosphoSite:Q9BTT4 DMDM:74733145
PaxDb:Q9BTT4 PRIDE:Q9BTT4 DNASU:84246 Ensembl:ENST00000255764
GeneID:84246 KEGG:hsa:84246 UCSC:uc003jdo.3 GeneCards:GC05M006428
HGNC:HGNC:28760 HPA:HPA042795 MIM:612382 neXtProt:NX_Q9BTT4
PharmGKB:PA144596412 InParanoid:Q9BTT4 PhylomeDB:Q9BTT4
ChiTaRS:MED10 GenomeRNAi:84246 NextBio:73726 Bgee:Q9BTT4
CleanEx:HS_MED10 Genevestigator:Q9BTT4 Uniprot:Q9BTT4
Length = 135
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 61/93 (65%), Positives = 78/93 (83%)
Query: 23 MISGLQEIDKLKSQVQDIHVPLEVFDYIDQGRNPQLYTKDCIEKALTKNEQVKGKIDAYR 82
+++GLQ+IDK + Q+ DI VPLEVF+YIDQGRNPQLYTK+C+E+AL KNEQVKGKID +
Sbjct: 44 IVTGLQDIDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTMK 103
Query: 83 KFKAHMLVELSGAFPNELAKYRAIRGGDETPPS 115
KFK+ ++ ELS FP ++AKYR+IRG D PPS
Sbjct: 104 KFKSLLIQELSKVFPEDMAKYRSIRGEDH-PPS 135
>MGI|MGI:106331 [details] [associations]
symbol:Med10 "mediator of RNA polymerase II transcription,
subunit 10 homolog (NUT2, S. cerevisiae)" species:10090 "Mus
musculus" [GO:0001104 "RNA polymerase II transcription cofactor
activity" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0016592 "mediator complex"
evidence=IDA] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] InterPro:IPR019145
Pfam:PF09748 MGI:MGI:106331 GO:GO:0045944 Reactome:REACT_127416
GO:GO:0019827 Reactome:REACT_27166 GO:GO:0016592 GO:GO:0001104
eggNOG:NOG245504 KO:K15151 CTD:84246 GeneTree:ENSGT00390000014501
HOGENOM:HOG000006789 HOVERGEN:HBG107408 OMA:QDVHVPL
OrthoDB:EOG4TF0MK EMBL:AK013992 EMBL:AK156498 EMBL:BC048638
EMBL:BC056438 IPI:IPI00377931 RefSeq:NP_613062.1 UniGene:Mm.485382
UniGene:Mm.52583 IntAct:Q9CXU0 STRING:Q9CXU0 PhosphoSite:Q9CXU0
PRIDE:Q9CXU0 DNASU:28077 Ensembl:ENSMUST00000022089 GeneID:28077
KEGG:mmu:28077 UCSC:uc007rcq.1 InParanoid:Q9CXU0 NextBio:306612
Bgee:Q9CXU0 Genevestigator:Q9CXU0 Uniprot:Q9CXU0
Length = 135
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 61/93 (65%), Positives = 78/93 (83%)
Query: 23 MISGLQEIDKLKSQVQDIHVPLEVFDYIDQGRNPQLYTKDCIEKALTKNEQVKGKIDAYR 82
+++GLQ+IDK + Q+ DI VPLEVF+YIDQGRNPQLYTK+C+E+AL KNEQVKGKID +
Sbjct: 44 IVTGLQDIDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTMK 103
Query: 83 KFKAHMLVELSGAFPNELAKYRAIRGGDETPPS 115
KFK+ ++ ELS FP ++AKYR+IRG D PPS
Sbjct: 104 KFKSLLIQELSKVFPEDMAKYRSIRGEDH-PPS 135
>RGD|1310128 [details] [associations]
symbol:Med10 "mediator complex subunit 10" species:10116 "Rattus
norvegicus" [GO:0001104 "RNA polymerase II transcription cofactor
activity" evidence=IEA] [GO:0016592 "mediator complex"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR019145
Pfam:PF09748 RGD:1310128 GO:GO:0045944 GO:GO:0016592 GO:GO:0001104
EMBL:CH474002 KO:K15151 CTD:84246 GeneTree:ENSGT00390000014501
OMA:QDVHVPL OrthoDB:EOG4TF0MK IPI:IPI00362904 RefSeq:NP_001099567.2
UniGene:Rn.1773 Ensembl:ENSRNOT00000023161 GeneID:290939
KEGG:rno:290939 UCSC:RGD:1310128 NextBio:631863 Uniprot:D4A7K6
Length = 135
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 61/93 (65%), Positives = 78/93 (83%)
Query: 23 MISGLQEIDKLKSQVQDIHVPLEVFDYIDQGRNPQLYTKDCIEKALTKNEQVKGKIDAYR 82
+++GLQ+IDK + Q+ DI VPLEVF+YIDQGRNPQLYTK+C+E+AL KNEQVKGKID +
Sbjct: 44 IVTGLQDIDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTMK 103
Query: 83 KFKAHMLVELSGAFPNELAKYRAIRGGDETPPS 115
KFK+ ++ ELS FP ++AKYR+IRG D PPS
Sbjct: 104 KFKSLLIQELSKVFPEDMAKYRSIRGEDH-PPS 135
>UNIPROTKB|E1BVD0 [details] [associations]
symbol:MED10 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001104 "RNA polymerase II transcription cofactor
activity" evidence=IEA] [GO:0016592 "mediator complex"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR019145
Pfam:PF09748 GO:GO:0045944 GO:GO:0016592 GO:GO:0001104
GeneTree:ENSGT00390000014501 OMA:QDVHVPL EMBL:AADN02008008
IPI:IPI00573277 Ensembl:ENSGALT00000021339 NextBio:20823783
Uniprot:E1BVD0
Length = 134
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 59/91 (64%), Positives = 76/91 (83%)
Query: 23 MISGLQEIDKLKSQVQDIHVPLEVFDYIDQGRNPQLYTKDCIEKALTKNEQVKGKIDAYR 82
M++GLQ+IDK + Q+ DI VPLEVF+YIDQGRNPQLYTK+C+E+AL KNEQVKGKID +
Sbjct: 44 MVTGLQDIDKCRQQLHDISVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTMK 103
Query: 83 KFKAHMLVELSGAFPNELAKYRAIRGGDETP 113
KFK+ ++ EL+ FP ++AKY+AIRG D P
Sbjct: 104 KFKSLLIQELTKVFPEDMAKYKAIRGEDPPP 134
>UNIPROTKB|F1PPU6 [details] [associations]
symbol:MED10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0019827 "stem
cell maintenance" evidence=IEA] [GO:0016592 "mediator complex"
evidence=IEA] [GO:0001104 "RNA polymerase II transcription cofactor
activity" evidence=IEA] InterPro:IPR019145 Pfam:PF09748
GO:GO:0045944 GO:GO:0016592 GO:GO:0001104
GeneTree:ENSGT00390000014501 OMA:QDVHVPL EMBL:AAEX03017180
Ensembl:ENSCAFT00000016442 Uniprot:F1PPU6
Length = 104
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 59/91 (64%), Positives = 76/91 (83%)
Query: 23 MISGLQEIDKLKSQVQDIHVPLEVFDYIDQGRNPQLYTKDCIEKALTKNEQVKGKIDAYR 82
+++GLQ+IDK + Q+ DI VPLEVF+YIDQGRNPQLYTK+C+E+AL KNEQVKGKID +
Sbjct: 13 IVTGLQDIDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTMK 72
Query: 83 KFKAHMLVELSGAFPNELAKYRAIRGGDETP 113
KFK+ ++ ELS FP ++AKYR+IRG D P
Sbjct: 73 KFKSLLIQELSKVFPEDMAKYRSIRGEDHAP 103
>ZFIN|ZDB-GENE-070117-2423 [details] [associations]
symbol:med10 "mediator of RNA polymerase II
transcription, subunit 10 homolog" species:7955 "Danio rerio"
[GO:0016592 "mediator complex" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001104 "RNA polymerase II transcription cofactor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007507 "heart development" evidence=IMP] InterPro:IPR019145
Pfam:PF09748 ZFIN:ZDB-GENE-070117-2423 GO:GO:0007507 GO:GO:0016055
GO:GO:0016592 GO:GO:0001104 eggNOG:NOG245504 KO:K15151 CTD:84246
GeneTree:ENSGT00390000014501 HOGENOM:HOG000006789
HOVERGEN:HBG107408 OMA:QDVHVPL OrthoDB:EOG4TF0MK EMBL:AY698065
EMBL:CU013549 EMBL:BC093274 IPI:IPI00494804 IPI:IPI00855650
RefSeq:NP_001017699.1 UniGene:Dr.82661 STRING:Q0VIA1
Ensembl:ENSDART00000097270 Ensembl:ENSDART00000103887
Ensembl:ENSDART00000145549 GeneID:550394 KEGG:dre:550394
InParanoid:Q0VIA1 NextBio:20879644 Bgee:Q0VIA1 Uniprot:Q0VIA1
Length = 134
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 61/93 (65%), Positives = 76/93 (81%)
Query: 23 MISGLQEIDKLKSQVQDIHVPLEVFDYIDQGRNPQLYTKDCIEKALTKNEQVKGKIDAYR 82
MI+GLQ+I+K + Q+ DI+VPLEVF+YIDQGRNPQLYTK+C+E+AL KNEQVKGKID
Sbjct: 44 MITGLQDIEKCRQQLHDINVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTLT 103
Query: 83 KFKAHMLVELSGAFPNELAKYRAIRGGDETPPS 115
KFK+ ++ EL FP E+AKY+AI G D PPS
Sbjct: 104 KFKSLLISELGKVFPEEMAKYKAIHGDD--PPS 134
>FB|FBgn0036581 [details] [associations]
symbol:MED10 "Mediator complex subunit 10" species:7227
"Drosophila melanogaster" [GO:0003713 "transcription coactivator
activity" evidence=NAS] [GO:0016592 "mediator complex"
evidence=ISS;IDA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0001104 "RNA polymerase
II transcription cofactor activity" evidence=ISS;IMP] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR019145 Pfam:PF09748 EMBL:AE014296
GO:GO:0006367 GO:GO:0016592 GO:GO:0001104 eggNOG:NOG245504
KO:K15151 CTD:84246 GeneTree:ENSGT00390000014501 OMA:QDVHVPL
EMBL:AY005465 EMBL:AY118450 RefSeq:NP_648849.3 UniGene:Dm.14491
IntAct:Q9GYU7 MINT:MINT-760095 STRING:Q9GYU7 PaxDb:Q9GYU7
PRIDE:Q9GYU7 EnsemblMetazoa:FBtr0301481 EnsemblMetazoa:FBtr0333560
GeneID:39777 KEGG:dme:Dmel_CG5057 FlyBase:FBgn0036581
InParanoid:Q9GYU7 OrthoDB:EOG4BCC4D PhylomeDB:Q9GYU7
GenomeRNAi:39777 NextBio:815333 Bgee:Q9GYU7 Uniprot:Q9GYU7
Length = 133
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 58/87 (66%), Positives = 74/87 (85%)
Query: 22 TMISGLQEIDKLKSQVQDIHVPLEVF-DYIDQGRNPQLYTKDCIEKALTKNEQVKGKIDA 80
++++GLQEIDKL+SQVQD++VP EVF DYIDQ +NPQLYTKDC+EKAL KNE+VKGKI+
Sbjct: 43 SLVTGLQEIDKLRSQVQDVYVPFEVFFDYIDQDKNPQLYTKDCVEKALAKNEEVKGKIEG 102
Query: 81 YRKFKAHMLVELSGAFPNELAKYRAIR 107
+KFK ++L+EL FPNE+ YRA R
Sbjct: 103 LKKFKTNLLLELYKTFPNEMNNYRAYR 129
>WB|WBGene00007014 [details] [associations]
symbol:mdt-10 species:6239 "Caenorhabditis elegans"
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016592 "mediator
complex" evidence=IEA] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] [GO:0040039 "inductive cell
migration" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR019145 Pfam:PF09748 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040017
GO:GO:0040035 EMBL:Z36753 GO:GO:0040039 GO:GO:0016592 GO:GO:0001104
KO:K15151 GeneTree:ENSGT00390000014501 HOGENOM:HOG000006789
PIR:T24720 RefSeq:NP_495650.1 ProteinModelPortal:P45966
IntAct:P45966 STRING:P45966 PaxDb:P45966 EnsemblMetazoa:T09A5.6.1
EnsemblMetazoa:T09A5.6.2 GeneID:188311 KEGG:cel:CELE_T09A5.6
UCSC:T09A5.6 CTD:188311 WormBase:T09A5.6 eggNOG:KOG3046
InParanoid:P45966 OMA:DLASNFQ NextBio:938342 Uniprot:P45966
Length = 173
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 42/101 (41%), Positives = 66/101 (65%)
Query: 7 NHLGEYSKFISSFRQTMISGLQEIDKLKSQVQDIHVPLEVFDYIDQGRNPQLYTKDCIEK 66
N +Y ++ T++ GLQ++D++K D VPL++ Y+D G+NP LY+K C+EK
Sbjct: 67 NFQTKYQDALNGRIYTLVRGLQDLDRMKGTFSDKKVPLDLLPYLDDGKNPCLYSKHCMEK 126
Query: 67 ALTKNEQVKGKIDAYRKFKAHMLVELSGAFPNELAKYRAIR 107
L KN+ V GKI+ Y+KF+AH++ E S P+ + YR+IR
Sbjct: 127 TLEKNKAVNGKIEIYKKFRAHLMKEFSEEMPDLVMYYRSIR 167
>TAIR|locus:2165680 [details] [associations]
symbol:MED10A species:3702 "Arabidopsis thaliana"
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016592 "mediator complex" evidence=IDA]
InterPro:IPR019145 Pfam:PF09748 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB017067 GO:GO:0016592 GO:GO:0001104
EMBL:BT002847 EMBL:BT004431 IPI:IPI00529616 RefSeq:NP_199006.1
UniGene:At.30199 IntAct:Q9FHZ2 PRIDE:Q9FHZ2 DNASU:834196
EnsemblPlants:AT5G41910.1 GeneID:834196 KEGG:ath:AT5G41910
TAIR:At5g41910 eggNOG:NOG245504 InParanoid:Q9FHZ2 KO:K15151
OMA:IDTMTKF PhylomeDB:Q9FHZ2 ProtClustDB:CLSN2914921
Genevestigator:Q9FHZ2 Uniprot:Q9FHZ2
Length = 186
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 36/87 (41%), Positives = 56/87 (64%)
Query: 22 TMISGLQEIDKLKSQVQDIHVPLEVFDYIDQGRNPQLYTKDCIEK-ALTKNEQVKGKIDA 80
+++ L + KL + +I VP+EV + ID G+NP +TKD + K + KN+ KGK DA
Sbjct: 73 SLVMELDNMAKLSDKC-NIQVPIEVLNLIDDGKNPDEFTKDVLNKNCIAKNQVTKGKSDA 131
Query: 81 YRKFKAHMLVELSGAFPNELAKYRAIR 107
++ + H+L EL AFP+E+ +YR IR
Sbjct: 132 FKGLRKHLLEELEQAFPDEVDRYRDIR 158
>DICTYBASE|DDB_G0290209 [details] [associations]
symbol:med10 "putative mediator complex subunit 10"
species:44689 "Dictyostelium discoideum" [GO:0016592 "mediator
complex" evidence=IEA;ISS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR019145 Pfam:PF09748 dictyBase:DDB_G0290209
GenomeReviews:CM000154_GR GO:GO:0006366 EMBL:AAFI02000161
GO:GO:0016592 GO:GO:0001104 KO:K15151 RefSeq:XP_635833.1
PRIDE:Q54GE5 EnsemblProtists:DDB0266869 GeneID:8627541
KEGG:ddi:DDB_G0290209 eggNOG:NOG299418 OMA:PLEIFRV Uniprot:Q54GE5
Length = 219
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 32/90 (35%), Positives = 57/90 (63%)
Query: 23 MISGLQEIDKLKSQVQDIHVPLEVFDYIDQGRNPQLYTKDCIEKALTKNEQVKGKIDAYR 82
+I+ ++I+ + V D+ +PLE+F IDQ +NP LY K+ ++ L+ NE+ KGKI++ +
Sbjct: 90 IINLYEKIESNRHIVNDVEIPLEIFRVIDQSKNPDLYVKETLQNCLSANEKTKGKIESIK 149
Query: 83 KFKAHMLVELSGAFPNELAKYRAIRGGDET 112
FK + +S +F +E A+Y+ + ET
Sbjct: 150 NFKKELESHISESFASEYAEYKLLTQKKET 179
>TAIR|locus:505006147 [details] [associations]
symbol:AT1G26665 species:3702 "Arabidopsis thaliana"
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016592 "mediator complex" evidence=IEA]
InterPro:IPR019145 Pfam:PF09748 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC006535 GO:GO:0016592 GO:GO:0001104
eggNOG:NOG245504 KO:K15151 EMBL:AF372912 EMBL:AY057733
IPI:IPI00525307 IPI:IPI00544817 IPI:IPI00545239 PIR:F86393
RefSeq:NP_564254.1 RefSeq:NP_973916.1 UniGene:At.19138
IntAct:F4HPA7 PRIDE:F4HPA7 EnsemblPlants:AT1G26665.2 GeneID:839207
KEGG:ath:AT1G26665 TAIR:At1g26665 HOGENOM:HOG000243259
InParanoid:Q93WN1 OMA:MASIQRT ProtClustDB:CLSN2917062
Uniprot:F4HPA7
Length = 189
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 33/86 (38%), Positives = 54/86 (62%)
Query: 22 TMISGLQEIDKLKSQVQDIHVPLEVFDYIDQGRNPQLYTKDCIEKALTKNEQVKGKIDAY 81
+++ L + KL S+ +I +P+EV + ID G+NP +TKD + + +N+ KGK DA+
Sbjct: 77 SLVMELDNMTKL-SEKCNIQIPMEVLNLIDDGKNPDEFTKDVLNSCIARNQVTKGKTDAF 135
Query: 82 RKFKAHMLVELSGAFPNELAKYRAIR 107
+ + H+L EL FP+E+ YR IR
Sbjct: 136 KDLRKHILEELEQNFPDEVDMYREIR 161
>UNIPROTKB|G4N033 [details] [associations]
symbol:MGG_05314 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR019145
Pfam:PF09748 EMBL:CM001233 GO:GO:0016592 GO:GO:0001104 KO:K15151
RefSeq:XP_003712875.1 EnsemblFungi:MGG_05314T0 GeneID:2675501
KEGG:mgr:MGG_05314 Uniprot:G4N033
Length = 186
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 25/84 (29%), Positives = 47/84 (55%)
Query: 16 ISSFRQTMISGLQEIDKLKS--QVQDIHVPLEVFDYIDQGRNPQLYTKDCIEKALTKNEQ 73
++S +++ S LQ I + + HVP+E+ Y++ GRNP +YT++ +E N+
Sbjct: 48 VASELKSLSSTLQNIHNTAAAPSTRLPHVPVELIAYVENGRNPDIYTREFVEMLRRGNQL 107
Query: 74 VKGKIDAYRKFKAHMLVELSGAFP 97
++GK A+ F+ + E+ A P
Sbjct: 108 MRGKTHAFESFRDILAEEMRAAMP 131
>CGD|CAL0003598 [details] [associations]
symbol:MED10 species:5476 "Candida albicans" [GO:0070847
"core mediator complex" evidence=IEA] [GO:0016592 "mediator
complex" evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR019145
Pfam:PF09748 CGD:CAL0003598 GO:GO:0016592 GO:GO:0001104
EMBL:AACQ01000070 EMBL:AACQ01000071 eggNOG:NOG245504 KO:K15151
RefSeq:XP_716337.1 RefSeq:XP_716399.1 STRING:Q5A3K2 GeneID:3641994
GeneID:3642043 KEGG:cal:CaO19.12733 KEGG:cal:CaO19.5268
Uniprot:Q5A3K2
Length = 170
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 27/94 (28%), Positives = 50/94 (53%)
Query: 9 LGEYSKFISSFRQTMISGLQEIDKLKSQVQDIHVPLEVFDYIDQGRNPQLYTKDCIEKAL 68
+ + ++ IS QT + D + ++ +P++V YI+ GRNP +YT++ IE
Sbjct: 50 MNKLNQLISQLSQTSTTANDPNDA-NTNLKQFLIPIDVISYIEDGRNPDIYTREFIEVNA 108
Query: 69 TKNEQVKGKIDAYRKFKAHMLVELSGAFPNELAK 102
N ++KGK+ ++K + +L FP +L K
Sbjct: 109 KSNARLKGKMLGFKKLRDVFGDKLKQEFP-QLEK 141
>POMBASE|SPBC31F10.09c [details] [associations]
symbol:nut2 "mediator complex subunit Med10"
species:4896 "Schizosaccharomyces pombe" [GO:0001104 "RNA
polymerase II transcription cofactor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IC] [GO:0016592 "mediator complex" evidence=IDA]
InterPro:IPR019145 Pfam:PF09748 PomBase:SPBC31F10.09c GO:GO:0005829
GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016592
GO:GO:0001104 eggNOG:NOG245504 PIR:T40212 RefSeq:NP_596571.2
IntAct:P87310 STRING:P87310 GeneID:2540272 OrthoDB:EOG44TSJC
NextBio:20801402 Uniprot:P87310
Length = 144
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 22 TMISGLQEIDKLKSQVQDIHVPLEVFDYIDQGRNPQLYTKDCIEKALTKNEQVKGKIDAY 81
T+I L+ + + +V ++ +P +V +YI+QGRNP +Y + E N+ V GK+ A
Sbjct: 50 TLIRDLKSLPDISRKVNNL-IPQDVLEYIEQGRNPDVYARQFSELVQKDNQYVNGKLYAI 108
Query: 82 RKFKAHMLVELSGAFP 97
F+ E+ A+P
Sbjct: 109 EGFQKAFAEEIKQAYP 124
>SGD|S000006372 [details] [associations]
symbol:NUT2 "Subunit of the RNA polymerase II mediator
complex" species:4932 "Saccharomyces cerevisiae" [GO:0001104 "RNA
polymerase II transcription cofactor activity" evidence=IEA]
[GO:0016592 "mediator complex" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0070847 "core mediator complex" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IGI;IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR019145
Pfam:PF09748 SGD:S000006372 GO:GO:0045944 GO:GO:0000122
EMBL:BK006949 GO:GO:0016592 GO:GO:0001104 EMBL:U25840
eggNOG:NOG245504 KO:K15151 GeneTree:ENSGT00390000014501
OrthoDB:EOG44TSJC PIR:S59827 RefSeq:NP_015494.1
ProteinModelPortal:Q06213 DIP:DIP-3922N IntAct:Q06213
MINT:MINT-503239 STRING:Q06213 PaxDb:Q06213 EnsemblFungi:YPR168W
GeneID:856297 KEGG:sce:YPR168W CYGD:YPR168w HOGENOM:HOG000001009
OMA:IRRSNQY NextBio:981650 Genevestigator:Q06213 GermOnline:YPR168W
GO:GO:0070847 Uniprot:Q06213
Length = 157
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 34 KSQVQDIHVPLEVFDYIDQGRNPQLYTKDCIEKALTKNEQVKGKIDAYRKFKAHMLVELS 93
+S + + +PLEV YI+ GRNP +YT++ +E N+ +GK+ ++ + + ++
Sbjct: 71 QSSLSKVDIPLEVVQYIEDGRNPDIYTREFVEAIRRSNQYQRGKMHGLKQLRDSLADKIV 130
Query: 94 GAFP 97
FP
Sbjct: 131 DEFP 134
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 116 116 0.00091 102 3 11 22 0.48 30
29 0.45 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 532 (57 KB)
Total size of DFA: 112 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:03
No. of threads or processors used: 24
Search cpu time: 14.54u 0.08s 14.62t Elapsed: 00:00:28
Total cpu time: 14.54u 0.08s 14.62t Elapsed: 00:00:31
Start: Thu Aug 15 10:49:51 2013 End: Thu Aug 15 10:50:22 2013