RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6387
(483 letters)
>d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast
(Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]}
Length = 483
Score = 276 bits (707), Expect = 2e-88
Identities = 108/460 (23%), Positives = 192/460 (41%), Gaps = 49/460 (10%)
Query: 59 LSKVNLPGLNITSYSGFFRVNST---VDKNHSSALFFWFFPAQEKNAS-EAPVLVWLQGG 114
LS+V P ++G + S + FFW F + N + + P+++WL GG
Sbjct: 17 LSEVPDPSNIPQMHAGHIPLRSEDADEQDSSDLEYFFWKFTNNDSNGNVDRPLIIWLNGG 76
Query: 115 PGASSMFGLFQEHGPLMLNKTKKNQTLPYLDTRKTHWTKNHNVIYIDNPVGTGFSFVEHN 174
PG SSM G E GP +N K L + W ++++ID P GTGFS ++
Sbjct: 77 PGCSSMDGALVESGPFRVNSDGK------LYLNEGSWISKGDLLFIDQPTGTGFSVEQNK 130
Query: 175 DLYS-------RNESHVGVNLYIGLVQFFKIFKEYQSNDFYVTGESYAGKYVPALAYTIH 227
D + V + L +FKIF E + ++GESYAG+Y+P A I
Sbjct: 131 DEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAIL 190
Query: 228 LNNPEQGSEKDKINLKGIAIGNGLCDPL-NMMVYSSYLYQLGLVDDNGK--KAIEEKEKQ 284
+N + D +LK + IGNG DP + Y + + L+D++ K + +
Sbjct: 191 NHNKFSKIDGDTYDLKALLIGNGWIDPNTQSLSYLPFAMEKKLIDESNPNFKHLTNAHEN 250
Query: 285 AMELILQWKWNEA----YEAFDQIING--DFNKSTIFHTLTNFTNYFNYLVPVADNTSDV 338
LI +EA Y+ + I+N + + + + N +N+ + + + +
Sbjct: 251 CQNLINSASTDEAAHFSYQECENILNLLLSYTRESSQKGTADCLNMYNFNLKDSYPSCGM 310
Query: 339 -------LMEELFKNTAFRQAVHLGNATFHS----DDTVEKFLKSDVMSSVKIWIEILLN 387
+ + F ++HL + ++V L + + + LL
Sbjct: 311 NWPKDISFVSKFFSTPGVIDSLHLDSDKIDHWKECTNSVGTKLSNPISKPSIHLLPGLLE 370
Query: 388 STNPSYKVLFYNGQLDIIVAYPLTVNFLKTLDWTGKEAYKTAPRTAWYYQ--------ND 439
S +++ +NG D+I ++ + L W G + + + + +
Sbjct: 371 SG---IEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEE 427
Query: 440 IAGYVKNVNKNFYEVLVRNAGHMVPKDQSEWAFDLITRFT 479
+GYVK +N V V NA HMVP D+S + ++ ++
Sbjct: 428 FSGYVKYD-RNLTFVSVYNASHMVPFDKSLVSRGIVDIYS 466
>d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo
sapiens) [TaxId: 9606]}
Length = 452
Score = 268 bits (685), Expect = 2e-85
Identities = 112/465 (24%), Positives = 191/465 (41%), Gaps = 70/465 (15%)
Query: 63 NLPGLNIT----SYSGFFRVNSTVDKNHSSALFFWFFPAQEKNASEAPVLVWLQGGPGAS 118
LPGL YSG+ + + S L +WF +Q K+ +PV++WL GGPG S
Sbjct: 9 RLPGLAKQPSFRQYSGY------LKSSGSKHLHYWFVESQ-KDPENSPVVLWLNGGPGCS 61
Query: 119 SMFGLFQEHGPLMLNKTKKNQTLPYLDTRKTHWTKNHNVIYIDNPVGTGFSFVEHNDLYS 178
S+ GL EHGP ++ L+ W NV+Y+++P G GFS+ + Y+
Sbjct: 62 SLDGLLTEHGPFLVQPDGVT-----LEYNPYSWNLIANVLYLESPAGVGFSYSDDKF-YA 115
Query: 179 RNESHVGVNLYIGLVQFFKIFKEYQSNDFYVTGESYAGKYVPALAYTIHLNNPEQGSEKD 238
N++ V + + L FF++F EY++N ++TGESYAG Y+P LA + +
Sbjct: 116 TNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVM--------QDP 167
Query: 239 KINLKGIAIGNGLCDP-LNMMVYSSYLYQLGLVDDNGKKAIE-----EKEKQAMELILQW 292
+NL+G+A+GNGL N + Y GL+ + +++ + + +
Sbjct: 168 SMNLQGLAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHCCSQNKCNFYDNKDLE 227
Query: 293 KWNEAYEAFDQIINGDFN---------------------------KSTIFHTLTNFTNYF 325
E + N N IF L +
Sbjct: 228 CVTNLQEVARIVGNSGLNIYNLYAPCAGGVPSHFRYEKDTVVVQDLGNIFTRLPLKRMWH 287
Query: 326 NYLVPVADN-------TSDVLMEELFKNTAFRQAVHLGN--ATFHSDDTVEKFLKSDVMS 376
L+ D T+ N R+A+++ + + + +
Sbjct: 288 QALLRSGDKVRMDPPCTNTTAASTYLNNPYVRKALNIPEQLPQWDMCNFLVNLQYRRLYR 347
Query: 377 SVKIWIEILLNSTNPSYKVLFYNGQLDIIVAYPLTVNFLKTLDWTGKEAYKTAPRTAWYY 436
S+ LL+S Y++L YNG +D+ + F+ +L+ + +
Sbjct: 348 SMNSQYLKLLSSQK--YQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDS 405
Query: 437 QNDIAGYVKNVNKNFYEVLVRNAGHMVPKDQSEWAFDLITRFTHG 481
IAG+VK + + ++ AGHMVP D+ AF + +RF +
Sbjct: 406 GEQIAGFVKEF-SHIAFLTIKGAGHMVPTDKPLAAFTMFSRFLNK 449
>d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 421
Score = 263 bits (674), Expect = 3e-84
Identities = 114/444 (25%), Positives = 182/444 (40%), Gaps = 40/444 (9%)
Query: 55 KAKNLSKVNLPGLNITSYSGFFRVNSTVDKNHSSALFFWFFPAQEKNASEAPVLVWLQGG 114
K K+ + + N+T Y+G+ V + FFW F ++ + ++ PV++WL GG
Sbjct: 1 KIKDPKILGIDP-NVTQYTGYLDVE-----DEDKHFFFWTFESR-NDPAKDPVILWLNGG 53
Query: 115 PGASSMFGLFQEHGPLMLNKTKKNQTLPYLDTRKTHWTKNHNVIYIDNPVGTGFSFVEHN 174
PG SS+ GLF E GP + W N VI++D PV GFS+ +
Sbjct: 54 PGCSSLTGLFFELGPSSIGPD------LKPIGNPYSWNSNATVIFLDQPVNVGFSYSGSS 107
Query: 175 DLYSRNESHVGVNLYIGLVQFFKIFKEY--QSNDFYVTGESYAGKYVPALAYTIHLNNPE 232
+ N G ++Y L FF F EY + DF++ GESYAG Y+P A I +
Sbjct: 108 GVS--NTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHK-- 163
Query: 233 QGSEKDKINLKGIAIGNGLCDPLNMMVYSSYL-----YQLGLVDDNGKKAIEEKEKQAME 287
NL + IGNGL DPL Y + + ++ A+E+ ++ +
Sbjct: 164 ----DRNFNLTSVLIGNGLTDPLTQYNYYEPMACGEGGEPSVLPSEECSAMEDSLERCLG 219
Query: 288 LILQWKWNEAYEAFDQIINGDFNKSTIFHTLTNFTNYFNYLVPVADNT---SDVLMEELF 344
LI +++ + N + T Y N + +++
Sbjct: 220 LIESCYDSQSVWSCVPATIYCNNAQLAPYQRTGRNVYDIRKDCEGGNLCYPTLQDIDDYL 279
Query: 345 KNTAFRQAVH--LGNATFHSDDTVEKFLKS-DVMSSVKIWIEILLNSTNPSYKVLFYNGQ 401
++AV + + + D FL + D M + LLN +L Y G
Sbjct: 280 NQDYVKEAVGAEVDHYESCNFDINRNFLFAGDWMKPYHTAVTDLLNQD---LPILVYAGD 336
Query: 402 LDIIVAYPLTVNFLKTLDWTGKEAYKTAPRTAWY--YQNDIAGYVKNVNKNFYEVLVRNA 459
D I + + L W E + + W +++AG VK+ K+F + V N
Sbjct: 337 KDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITDEVAGEVKSY-KHFTYLRVFNG 395
Query: 460 GHMVPKDQSEWAFDLITRFTHGSL 483
GHMVP D E A ++ + HG
Sbjct: 396 GHMVPFDVPENALSMVNEWIHGGF 419
>g1wht.1 c.69.1.5 (A:,B:) Serine carboxypeptidase II {Wheat
(Triticum vulgare) [TaxId: 4565]}
Length = 409
Score = 263 bits (672), Expect = 5e-84
Identities = 103/421 (24%), Positives = 170/421 (40%), Gaps = 33/421 (7%)
Query: 64 LPGLNITSYSGFFRVNSTVDKNHSSALFFWFFPAQEKNASEAPVLVWLQGGPGASSM-FG 122
P ++ YSG+ TVD+ +LF+ A E +A AP+++WL GGPG SS+ +G
Sbjct: 13 QPAVDFDMYSGYI----TVDEGAGRSLFYLLQEAPE-DAQPAPLVLWLNGGPGCSSVAYG 67
Query: 123 LFQEHGPLMLNKTKKNQTLPYLDTRKTHWTKNHNVIYIDNPVGTGFSFVE-HNDLYSRNE 181
+E G + + L + W K NV+++D+P G GFS+ +D+Y+ +
Sbjct: 68 ASEELGAFRVKP--RGAGLVL---NEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGD 122
Query: 182 SHVGVNLYIGLVQFFKIFKEYQSNDFYVTGESYAGKYVPALAYTIHLNNPEQGSEKDKIN 241
+ + Y L ++F+ F Y+ DFY+ GESYAG YVP L+ +H + IN
Sbjct: 123 NRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSK------NPVIN 176
Query: 242 LKGIAIGNGLCDPLNMMV-YSSYLYQLGLVDDNGKKAIEEKEKQAMELILQWKWNEAYEA 300
LKG +GNGL D + V + + G+V D+ + ++E + + A +
Sbjct: 177 LKGFMVGNGLIDDYHDYVGTFEFWWNHGIVSDDTYRRLKEACLHDSFIHPSPACDAATDV 236
Query: 301 FDQIINGDFNKSTIFHTLTNFTNYFNYLVPVADNTSDVLMEELFKNTAFRQAVHLGNATF 360
S + A + L N
Sbjct: 237 ATAEQGNIDMYSLYTPVCNISYDPCTERYSTAYYNRRDVQMALHANVTGAMNYTWAT--- 293
Query: 361 HSDDTVEKFLKSDVMSSVKIWIEILLNSTNPSYKVLFYNGQLDIIVAYPLTVNFLKTLDW 420
DT+ S + I+ E++ ++ ++G D +V T + L
Sbjct: 294 -CSDTINTHWHDAPRSMLPIYRELI----AAGLRIWVFSGDTDAVVPLTATRYSIGALGL 348
Query: 421 TGKEAYKTAPRTAWYYQNDIAGYVKNVNKNFYEVLVRNAGHMVPKDQSEWAFDLITRFTH 480
++ WY ++ G+ + K V VR AGH VP + A L F
Sbjct: 349 PTTTSWY-----PWYDDQEVGGWSQVY-KGLTLVSVRGAGHEVPLHRPRQALVLFQYFLQ 402
Query: 481 G 481
G
Sbjct: 403 G 403
>g1gxs.1 c.69.1.5 (A:,B:) Hydroxynitrile lyase {Sorghum (Sorghum
bicolor) [TaxId: 4558]}
Length = 425
Score = 263 bits (673), Expect = 5e-84
Identities = 90/430 (20%), Positives = 171/430 (39%), Gaps = 28/430 (6%)
Query: 62 VNLPG----LNITSYSGFFRVNSTVDKNHSSALFFWFFPAQEKNASEAPVLVWLQGGPGA 117
+ LPG + Y G+ T+D N+ AL++WF A + + AP+++WL GGPG
Sbjct: 8 LGLPGQPNGVAFGMYGGYV----TIDDNNGRALYYWFQEADTADPAAAPLVLWLNGGPGC 63
Query: 118 SSM-FGLFQEHGPLMLNKTKKNQTLPYLDTRKTHWTKNHNVIYIDNPVGTGFSFVEHNDL 176
SS+ G QE G ++ ++ L + W K N+++ ++P G GFS+ +
Sbjct: 64 SSIGLGAMQELGAFRVHTNGESLLL-----NEYAWNKAANILFAESPAGVGFSYSNTSSD 118
Query: 177 YSRNESHVGVNLYIGLVQFFKIFKEYQSNDFYVTGESYAGKYVPALAYTIHLNNPEQGSE 236
S + + + Y LV++F+ F Y +FY+ GES ++P L+ ++ N
Sbjct: 119 LSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGESGH--FIPQLSQVVYRNRN----N 172
Query: 237 KDKINLKGIAIGNGLCDP-LNMMVYSSYLYQLGLVDDNGKKAIEEKEKQAMELILQWKWN 295
IN +G+ + +GL + +M+ + GL+ D + + + + +
Sbjct: 173 SPFINFQGLLVSSGLTNDHEDMIGMFESWWHHGLISDETRDSGLKVCPGTSFMHPTPECT 232
Query: 296 EAYEAFDQIINGDFNKSTIFHTLTNFTNYFN--YLVPVADNTSDVLMEELFKNTAFRQAV 353
E + + T + + + +P D + + A+
Sbjct: 233 EVWNKALAEQGNINPYTIYTPTCDREPSPYQRRFWLPPYDPCAVFNSINYLNLPEVQTAL 292
Query: 354 H--LGNATFHSDDTVEKFLKSDVMSSVKIWIEILLNSTNPSYKVLFYNGQLDIIVAYPLT 411
H + + + + + + +V Y+G D +V T
Sbjct: 293 HANVSGIVEYPWTVCSNTIFDQWGQAADDLLPVYRELIQAGLRVWVYSGDTDSVVPVSST 352
Query: 412 VNFLKTLDWTGKEAYKTAPRTAWYYQNDIAGYVKNVNKNFYEVLVRNAGHMVPKDQSEWA 471
L L+ K ++ P + ++ G+ + V VR AGH+VP + A
Sbjct: 353 RRSLAALELPVKTSW--YPWYMAPTEREVGGWSVQY-EGLTYVTVRGAGHLVPVHRPAQA 409
Query: 472 FDLITRFTHG 481
F L +F G
Sbjct: 410 FLLFKQFLKG 419
>g1qd6.1 f.4.2.1 (A:,C:) Outer membrane phospholipase A (OMPLA)
{Escherichia coli [TaxId: 562]}
Length = 253
Score = 29.7 bits (67), Expect = 0.59
Identities = 12/79 (15%), Positives = 19/79 (24%), Gaps = 4/79 (5%)
Query: 369 FLKSDVMSSVKIWIEILLNSTNPSYKVLFYNGQLDIIVAYPLTVNFLKTLDWTGKEAYKT 428
+ + VK W + NP Y G + + Y L L
Sbjct: 148 AENGNWLVEVKPWYVVGNTDDNPDI--TKYMGYYQLKIGYHLGDAVLSAKGQYNWNTGYG 205
Query: 429 APRTAWYYQ--NDIAGYVK 445
Y + Y +
Sbjct: 206 GAELGLSYPITKHVRLYTQ 224
>d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium
radiobacter [TaxId: 358]}
Length = 293
Score = 29.5 bits (64), Expect = 0.74
Identities = 8/40 (20%), Positives = 16/40 (40%)
Query: 439 DIAGYVKNVNKNFYEVLVRNAGHMVPKDQSEWAFDLITRF 478
+ +V N+ + + GH + ++ E A D I
Sbjct: 252 PLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTA 291
>d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 322
Score = 29.5 bits (64), Expect = 0.96
Identities = 7/62 (11%), Positives = 23/62 (37%), Gaps = 8/62 (12%)
Query: 417 TLDWTGKEAYKTAPRTAWYYQNDIAGYVKNVNKNFYEVLVRNAGHMVPKDQSEWAFDLIT 476
L T ++ + P+ + + ++ I + + + GH D+ ++
Sbjct: 262 ALMVTAEKDFVLVPQMSQHMEDWI--------PHLKRGHIEDCGHWTQMDKPTEVNQILI 313
Query: 477 RF 478
++
Sbjct: 314 KW 315
>d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 268
Score = 28.9 bits (63), Expect = 1.4
Identities = 5/63 (7%), Positives = 8/63 (12%), Gaps = 1/63 (1%)
Query: 417 TLDWTGKEAYKTAPRTAWYYQNDIAGYVK-NVNKNFYEVLVRNAGHMVPKDQSEWAFDLI 475
+ Y D G + H I
Sbjct: 204 FFGFYDANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCI 263
Query: 476 TRF 478
+
Sbjct: 264 EPW 266
>d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH
{Escherichia coli [TaxId: 562]}
Length = 256
Score = 28.7 bits (62), Expect = 1.7
Identities = 10/72 (13%), Positives = 18/72 (25%), Gaps = 6/72 (8%)
Query: 413 NFLKTLDWTGKEAYKTAPRTAWYYQND------IAGYVKNVNKNFYEVLVRNAGHMVPKD 466
LKT+D + P Y D + + + + + A H
Sbjct: 179 EILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFIS 238
Query: 467 QSEWAFDLITRF 478
L+
Sbjct: 239 HPAEFCHLLVAL 250
>d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC
{Janthinobacterium sp. J3 [TaxId: 213804]}
Length = 268
Score = 27.9 bits (60), Expect = 3.0
Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 8/62 (12%)
Query: 417 TLDWTGKEAYKTAPRTAWYYQNDIAGYVKNVNKNFYEVLVRNAGHMVPKDQSEWAFDLIT 476
TL GK+ TA+ + + I + + ++ + GH + E +
Sbjct: 211 TLVVQGKDDKVVPVETAYKFLDLI--------DDSWGYIIPHCGHWAMIEHPEDFANATL 262
Query: 477 RF 478
F
Sbjct: 263 SF 264
>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis,
leukoagglutinin [TaxId: 37501]}
Length = 239
Score = 27.8 bits (61), Expect = 3.0
Identities = 19/122 (15%), Positives = 31/122 (25%), Gaps = 14/122 (11%)
Query: 65 PGLNITSYSGFFRVNSTVDKNHSSA--LFFWFFPAQEKNASEAPVLVWLQGGPGASSMFG 122
++ S+S F ++ L F+ P + S G
Sbjct: 62 TTGSVASFSTSFTFVVKAPNPDITSDGLAFYLAPPDSQI-----------PSGSVSKYLG 110
Query: 123 LFQEHGPLMLNKTKKNQTLPYLDTRKTHWTKNHNVIYIDNPVGTGFSFVEHNDLYSRNES 182
LF N+ + Y W N+ I ID G D + +
Sbjct: 111 LFNNSNSDSSNQIVAVEFDTYFAHSYDPWDPNYRHIGIDV-NGIESIKTVQWDWINGGVA 169
Query: 183 HV 184
Sbjct: 170 FA 171
>d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC
{Streptomyces purpurascens [TaxId: 1924]}
Length = 297
Score = 27.6 bits (59), Expect = 3.2
Identities = 5/29 (17%), Positives = 10/29 (34%)
Query: 454 VLVRNAGHMVPKDQSEWAFDLITRFTHGS 482
+ GH +P ++I T +
Sbjct: 268 AEIPGMGHALPSSVHGPLAEVILAHTRSA 296
>d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter
autotrophicus [TaxId: 280]}
Length = 310
Score = 27.6 bits (59), Expect = 3.4
Identities = 11/63 (17%), Positives = 23/63 (36%), Gaps = 7/63 (11%)
Query: 416 KTLDWTGKEAYKTAPRTAWYYQNDIAGYVKNVNKNFYEVLVRNAGHMVPKDQSEWAFDLI 475
+T G + P + + I G + + + +AGH V + + A + +
Sbjct: 251 QTFMAIGMKDKLLGPDVMYPMKALINGCPE-------PLEIADAGHFVQEFGEQVAREAL 303
Query: 476 TRF 478
F
Sbjct: 304 KHF 306
>d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp.
[TaxId: 1831]}
Length = 291
Score = 27.1 bits (58), Expect = 4.5
Identities = 7/40 (17%), Positives = 13/40 (32%)
Query: 439 DIAGYVKNVNKNFYEVLVRNAGHMVPKDQSEWAFDLITRF 478
A + N V + H + +D + I R+
Sbjct: 247 AEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARW 286
>d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida
cylindracea, cholesterol esterase [TaxId: 44322]}
Length = 534
Score = 27.4 bits (59), Expect = 4.7
Identities = 11/72 (15%), Positives = 23/72 (31%), Gaps = 3/72 (4%)
Query: 94 FFPAQEKNASEAPVLVWLQGGP---GASSMFGLFQEHGPLMLNKTKKNQTLPYLDTRKTH 150
P K + PV++W+ GG G+ ++F Q +L
Sbjct: 103 VRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWG 162
Query: 151 WTKNHNVIYIDN 162
+ ++ +
Sbjct: 163 FLAGDDIKAEGS 174
>d2e2aa_ a.7.2.1 (A:) Enzyme IIa from lactose specific PTS, IIa-lac
{Lactococcus lactis [TaxId: 1358]}
Length = 104
Score = 25.7 bits (57), Expect = 5.2
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 4/36 (11%)
Query: 279 EEKEKQAMELIL---QWKWNEAYEAFDQIINGDFNK 311
EE E++ + ++ EA NGDF K
Sbjct: 4 EEMTLLGFEIVAYAGDAR-SKLLEALKAAENGDFAK 38
>d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans
[TaxId: 1916]}
Length = 275
Score = 26.8 bits (57), Expect = 5.4
Identities = 6/40 (15%), Positives = 9/40 (22%)
Query: 439 DIAGYVKNVNKNFYEVLVRNAGHMVPKDQSEWAFDLITRF 478
D A + N H + E + F
Sbjct: 233 DAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAF 272
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 794
Score = 27.4 bits (60), Expect = 5.6
Identities = 40/220 (18%), Positives = 64/220 (29%), Gaps = 38/220 (17%)
Query: 209 VTGESYAGK---------YVPALAYTIHLNNPEQGSEKDKINLKGIAIGNGLCD------ 253
+TGES AGK Y +A + EQ + I N L +
Sbjct: 128 ITGESGAGKTVNTKRVIQYFATIAASGEKKKEEQSGKMQGTLEDQIISANPLLEAFGNAK 187
Query: 254 -PLNMMVYSSYLYQLGLVDDNGKKA---IEEKEKQAMELILQWKWNEAYEAFDQIINGDF 309
N + GK A IE + + Q +Y F QI++
Sbjct: 188 TVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVTFQLPAERSYHIFYQIMSNKK 247
Query: 310 NKSTIFHTLTNFTNYFNYL------VPVADNTSD----------VLMEELFKNTAFRQAV 353
+ +T ++Y+ VP D+ + + K ++
Sbjct: 248 PELIDMLLITTNPYDYHYVSEGEITVPSIDDQEELMATDSAIDILGFSADEKTAIYKLTG 307
Query: 354 ---HLGNATFHSDDTVEKFLKSDVMSSVKIWIEILLNSTN 390
H GN F E+ + K + LNS
Sbjct: 308 AVMHYGNLKFKQKQREEQAEPDGTEVADKAAYLMGLNSAE 347
>d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens
[TaxId: 294]}
Length = 273
Score = 26.8 bits (57), Expect = 5.8
Identities = 5/39 (12%), Positives = 10/39 (25%)
Query: 443 YVKNVNKNFYEVLVRNAGHMVPKDQSEWAFDLITRFTHG 481
+ K + A H + + + F G
Sbjct: 235 ASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAFIKG 273
>d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens
[TaxId: 294]}
Length = 271
Score = 26.8 bits (57), Expect = 6.2
Identities = 8/71 (11%), Positives = 18/71 (25%), Gaps = 7/71 (9%)
Query: 408 YPLTVNFLKTLDWTGKEAYKTAPRTAWYYQNDIAGYVKNVNKNFYEVLVRNAGHMVPKDQ 467
+ + TL G T + K + ++A H
Sbjct: 205 PDMAKIDVPTLVIHGDGDQIVPFETTGKV-------AAELIKGAELKVYKDAPHGFAVTH 257
Query: 468 SEWAFDLITRF 478
++ + + F
Sbjct: 258 AQQLNEDLLAF 268
>d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae
[TaxId: 666]}
Length = 264
Score = 26.8 bits (57), Expect = 6.3
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 454 VLVRNAGHMVPKDQSEWAFDLITRF 478
V AGH V +Q + ++
Sbjct: 234 SQVAQAGHNVHHEQPQAFAKIVQAM 258
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1
(PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Length = 323
Score = 26.7 bits (57), Expect = 6.8
Identities = 6/58 (10%), Positives = 20/58 (34%)
Query: 261 SSYLYQLGLVDDNGKKAIEEKEKQAMELILQWKWNEAYEAFDQIINGDFNKSTIFHTL 318
++Y ++N + + ++ + + + A F+ + D + L
Sbjct: 2 ATYDKGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYL 59
>d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces
aureofaciens [TaxId: 1894]}
Length = 277
Score = 26.4 bits (56), Expect = 7.7
Identities = 7/40 (17%), Positives = 12/40 (30%)
Query: 439 DIAGYVKNVNKNFYEVLVRNAGHMVPKDQSEWAFDLITRF 478
+ A + V V A H + +E + F
Sbjct: 235 NTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAF 274
>d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol
esterase) {Cow (Bos taurus) [TaxId: 9913]}
Length = 579
Score = 26.5 bits (57), Expect = 8.5
Identities = 38/268 (14%), Positives = 72/268 (26%), Gaps = 26/268 (9%)
Query: 96 PAQEKNASEA-PVLVWLQGGPGASSMFGLFQEHGPLMLNKTKKNQTLPYLDTRKTHWTKN 154
P K S PV++W+ GG L D + N
Sbjct: 88 PQGRKEVSHDLPVMIWIYGG-AFLMGASQGANFLSNYL-----------YDGEEIATRGN 135
Query: 155 HNVIYIDNPVGTGFSFVEHNDLYSRNESHVGVNLYIGLVQFFKIFKEYQSNDFYVTGESY 214
V+ + VG + N ++ I V+ + + GES
Sbjct: 136 VIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGES- 194
Query: 215 AGKYVPALAYTIHLNNPEQGSEKDKINLKGIAIGNGLCDPLNMMVYSSYLYQLGLVDDNG 274
A L+ +G K I+ G+ + + ++G D+
Sbjct: 195 ---AGGASVSLQTLSPYNKGLIKRAISQSGVGLCPWAIQQDPLFWAKRIAEKVGCPVDDT 251
Query: 275 KKAIEEKEKQAMELILQWKWNEA---------YEAFDQIINGDFNKSTIFHTLTNFTNYF 325
K + + Y +F +I+GDF + N +
Sbjct: 252 SKMAGCLKITDPRALTLAYKLPLGSTEYPKLHYLSFVPVIDGDFIPDDPVNLYANAADVD 311
Query: 326 NYLVPVADNTSDVLMEELFKNTAFRQAV 353
+ + ++ + +Q V
Sbjct: 312 YIAGTNDMDGHLFVGMDVPAINSNKQDV 339
>d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 290
Score = 26.4 bits (56), Expect = 8.7
Identities = 6/40 (15%), Positives = 15/40 (37%)
Query: 439 DIAGYVKNVNKNFYEVLVRNAGHMVPKDQSEWAFDLITRF 478
++A + + R+ H+ + E L++ F
Sbjct: 246 NVARVIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLSDF 285
>d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like
protein 6, DPP6, C-terminal domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 258
Score = 26.3 bits (56), Expect = 9.5
Identities = 19/132 (14%), Positives = 41/132 (31%), Gaps = 18/132 (13%)
Query: 94 FFPAQEKNASEAPVLVWLQGGPGASSMFGLFQEHGPLMLNKTKKNQTLPYLDTRKTHWTK 153
PA + + P+L+ + G PG+ S+ F+ ++ +
Sbjct: 20 LKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVM------------------VSS 61
Query: 154 NHNVIYIDNPVGTGFSFVEHNDLYSRNESHVGVNLYIGLVQFFKIFKEYQSNDFYVTGES 213
+ V+ + G+GF + R + + V+ + V G+
Sbjct: 62 HGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKD 121
Query: 214 YAGKYVPALAYT 225
Y G +
Sbjct: 122 YGGYLSTYILPA 133
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.136 0.413
Gapped
Lambda K H
0.267 0.0504 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,826,012
Number of extensions: 85594
Number of successful extensions: 299
Number of sequences better than 10.0: 1
Number of HSP's gapped: 266
Number of HSP's successfully gapped: 36
Length of query: 483
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 394
Effective length of database: 1,185,626
Effective search space: 467136644
Effective search space used: 467136644
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.5 bits)