Diaphorina citri psyllid: psy6387

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480---
MYIRGVFLVLLVVTCAQCSINKYPRIADLYQPQPGDNVSAPLILTDYIERGELVKAKNLSKVNLPGLNITSYSGFFRVNSTVDKNHSSALFFWFFPAQEKNASEAPVLVWLQGGPGASSMFGLFQEHGPLMLNKTKKNQTLPYLDTRKTHWTKNHNVIYIDNPVGTGFSFVEHNDLYSRNESHVGVNLYIGLVQFFKIFKEYQSNDFYVTGESYAGKYVPALAYTIHLNNPEQGSEKDKINLKGIAIGNGLCDPLNMMVYSSYLYQLGLVDDNGKKAIEEKEKQAMELILQWKWNEAYEAFDQIINGDFNKSTIFHTLTNFTNYFNYLVPVADNTSDVLMEELFKNTAFRQAVHLGNATFHSDDTVEKFLKSDVMSSVKIWIEILLNSTNPSYKVLFYNGQLDIIVAYPLTVNFLKTLDWTGKEAYKTAPRTAWYYQNDIAGYVKNVNKNFYEVLVRNAGHMVPKDQSEWAFDLITRFTHGSL
cHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHcccHHHHHHcccccccccccccccccEECccccccccccccEEEEEEEccccccccccEEEEccccccHHHHHHHHHHccccEEccccccccccccccccccccccccEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccEEEEcccccccHHHHHHHHHHHHccccccccccCEEEEEEEcccccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHcccHHHHHHHccccccccccHHHHHHHHHcccccHHHHHHHHHHHcccccEEEEEEccccccccHHHHHHHHHHccccccccccccccccEEEccEEEEEEEEEcccEEEEEEcccccccccccHHHHHHHHHHHHcccc
*YIRGVFLVLLVVTCAQCSINKYPRIADLY**********PLILTDYIE*GELVKAKNLSKVNLPGLNITSYSGFFRVNSTVDKNHSSALFFWFFPAQEKNASEAPVLVWLQGGPGASSMFGLFQEHGPLMLNKTKKNQTLPYLDTRKTHWTKNHNVIYIDNPVGTGFSFVEHNDLYSRNESHVGVNLYIGLVQFFKIFKEYQSNDFYVTGESYAGKYVPALAYTIHLNNPEQGSEKDKINLKGIAIGNGLCDPLNMMVYSSYLYQLGLVDDNGKKAIEEKEKQAMELILQWKWNEAYEAFDQIINGDFNKSTIFHTLTNFTNYFNYLVPVADNTSDVLMEELFKNTAFRQAVHLGNATFHSDDTVEKFLKSDVMSSVKIWIEILLNSTNPSYKVLFYNGQLDIIVAYPLTVNFLKTLDWTGKEAYKTAPRTAWYYQNDIAGYVKNVNKNFYEVLVRNAGHMVPKDQSEWAFDLITRFTHGSL
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MYIRGVFLVLLVVTCAQCSINKYPRIADLYQPQPGDNVSAPLILTDYIERGELVKAKNLSKVNLPGLNITSYSGFFRVNSTVDKNHSSALFFWFFPAQEKNASEAPVLVWLQGGPGASSMFGLFQEHGPLMLNKTKKNQTLPYLDTRKTHWTKNHNVIYIDNPVGTGFSFVEHNDLYSRNESHVGVNLYIGLVQFFKIFKEYQSNDFYVTGESYAGKYVPALAYTIHLNNPEQGSEKDKINLKGIAIGNGLCDPLNMMVYSSYLYQLGLVDDNGKKAIEEKEKQAMELILQWKWNEAYEAFDQIINGDFNKSTIFHTLTNFTNYFNYLVPVADNTSDVLMEELFKNTAFRQAVHLGNATFHSDDTVEKFLKSDVMSSVKIWIEILLNSTNPSYKVLFYNGQLDIIVAYPLTVNFLKTLDWTGKEAYKTAPRTAWYYQNDIAGYVKNVNKNFYEVLVRNAGHMVPKDQSEWAFDLITRFTHGSL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Serine carboxypeptidase-like 50 Probable carboxypeptidase.confidentQ9M9Q6
Probable serine carboxypeptidase CPVL May be involved in the digestion of phagocytosed particles in the lysosome, participation in an inflammatory protease cascade, and trimming of peptides for antigen presentation.confidentQ9H3G5
Probable serine carboxypeptidase CPVL May be involved in the digestion of phagocytosed particles in the lysosome, participation in an inflammatory protease cascade, and trimming of peptides for antigen presentation.confidentQ4QR71

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0009505 [CC]plant-type cell wallprobableGO:0005618, GO:0044464, GO:0005623, GO:0030312, GO:0005575, GO:0071944
GO:0005615 [CC]extracellular spaceprobableGO:0005575, GO:0005576, GO:0044421
GO:0019915 [BP]lipid storageprobableGO:0008150, GO:0033036, GO:0010876, GO:0051179
GO:0033227 [BP]dsRNA transportprobableGO:0015931, GO:0050658, GO:0051234, GO:0006810, GO:0050657, GO:0071705, GO:0044765, GO:0008150, GO:0071702, GO:0033036, GO:0051236, GO:0006403, GO:0051179, GO:0044699
GO:0000324 [CC]fungal-type vacuoleprobableGO:0005737, GO:0000323, GO:0000322, GO:0005773, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226, GO:0043231
GO:0006508 [BP]proteolysisprobableGO:0044238, GO:0019538, GO:0043170, GO:0071704, GO:0008150, GO:0008152
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0004185 [MF]serine-type carboxypeptidase activityprobableGO:0016787, GO:0017171, GO:0003824, GO:0004180, GO:0008238, GO:0070011, GO:0003674, GO:0070008, GO:0008233, GO:0008236
GO:0009506 [CC]plasmodesmaprobableGO:0055044, GO:0005575, GO:0030054, GO:0005911

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1AC5, chain A
Confidence level:very confident
Coverage over the Query: 69-482
View the alignment between query and template
View the model in PyMOL