Query psy6388
Match_columns 480
No_of_seqs 276 out of 1539
Neff 7.0
Searched_HMMs 46136
Date Fri Aug 16 16:36:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6388.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6388hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1627|consensus 100.0 2.4E-68 5.2E-73 463.7 10.1 158 266-480 1-160 (160)
2 PF00647 EF1G: Elongation fact 100.0 7.6E-56 1.7E-60 372.8 4.0 106 263-368 1-107 (107)
3 PLN02473 glutathione S-transfe 100.0 9.5E-29 2.1E-33 236.6 21.4 198 4-204 2-211 (214)
4 PRK13972 GSH-dependent disulfi 100.0 6.1E-29 1.3E-33 238.6 19.2 197 5-208 2-209 (215)
5 PRK09481 sspA stringent starva 100.0 3.1E-28 6.7E-33 233.3 22.0 188 4-204 10-202 (211)
6 PLN02395 glutathione S-transfe 100.0 3.8E-28 8.2E-33 232.5 21.7 200 4-206 2-212 (215)
7 KOG0867|consensus 100.0 3.1E-28 6.7E-33 236.2 18.4 200 4-205 2-210 (226)
8 PRK10542 glutathionine S-trans 100.0 5.3E-28 1.2E-32 228.9 19.3 190 6-204 2-197 (201)
9 PRK15113 glutathione S-transfe 100.0 3.9E-27 8.4E-32 226.2 20.5 193 4-204 5-208 (214)
10 PRK10357 putative glutathione 100.0 4.8E-27 1E-31 222.9 20.6 193 6-203 2-199 (202)
11 TIGR01262 maiA maleylacetoacet 100.0 4E-27 8.7E-32 224.4 19.2 195 6-204 1-204 (210)
12 COG0625 Gst Glutathione S-tran 99.9 9.6E-27 2.1E-31 222.6 20.4 189 6-199 2-199 (211)
13 PRK11752 putative S-transferas 99.9 1.5E-26 3.3E-31 229.5 21.3 197 4-203 44-257 (264)
14 KOG0406|consensus 99.9 3.3E-24 7.2E-29 204.9 20.3 193 4-207 9-214 (231)
15 KOG0868|consensus 99.9 7.5E-25 1.6E-29 197.8 14.6 198 2-204 3-207 (217)
16 PTZ00057 glutathione s-transfe 99.9 1.9E-23 4.2E-28 199.3 18.9 187 1-204 1-199 (205)
17 PF00647 EF1G: Elongation fact 99.9 2.3E-24 4.9E-29 182.0 4.4 65 359-425 43-107 (107)
18 PRK10387 glutaredoxin 2; Provi 99.9 7.3E-23 1.6E-27 195.1 14.9 182 6-198 2-207 (210)
19 PLN02378 glutathione S-transfe 99.9 1.2E-22 2.6E-27 195.1 16.3 179 11-211 18-206 (213)
20 KOG1695|consensus 99.9 1E-21 2.2E-26 186.4 17.4 195 2-204 1-200 (206)
21 PLN02817 glutathione dehydroge 99.9 4.6E-21 9.9E-26 190.2 17.9 172 12-205 72-252 (265)
22 TIGR00862 O-ClC intracellular 99.9 1E-20 2.2E-25 184.2 19.8 179 11-208 17-224 (236)
23 PLN02907 glutamate-tRNA ligase 99.9 5E-21 1.1E-25 211.8 18.3 162 4-205 2-169 (722)
24 TIGR02182 GRXB Glutaredoxin, G 99.8 2.7E-20 5.9E-25 178.3 14.4 177 6-198 1-206 (209)
25 KOG4420|consensus 99.8 4.9E-18 1.1E-22 161.9 13.1 197 4-205 26-288 (325)
26 cd03181 GST_C_EFB1gamma GST_C 99.6 8.9E-16 1.9E-20 133.7 10.6 123 89-211 1-123 (123)
27 KOG1627|consensus 99.6 8.3E-16 1.8E-20 135.0 2.9 101 259-373 4-109 (160)
28 cd03196 GST_C_5 GST_C family, 99.5 4.8E-14 1E-18 122.5 10.4 112 86-201 3-114 (115)
29 cd03182 GST_C_GTT2_like GST_C 99.5 1E-13 2.2E-18 119.6 11.5 111 86-198 1-117 (117)
30 cd03178 GST_C_Ure2p_like GST_C 99.5 6.6E-14 1.4E-18 120.1 9.0 112 89-202 1-112 (113)
31 cd03188 GST_C_Beta GST_C famil 99.5 9.4E-14 2E-18 118.9 9.8 111 89-202 2-114 (114)
32 cd03044 GST_N_EF1Bgamma GST_N 99.5 9E-14 1.9E-18 111.4 8.1 73 5-79 1-74 (75)
33 cd03189 GST_C_GTT1_like GST_C 99.5 2.8E-13 6.1E-18 117.3 11.6 110 84-196 2-119 (119)
34 cd03187 GST_C_Phi GST_C family 99.5 2.6E-13 5.6E-18 117.0 11.1 112 89-202 2-118 (118)
35 cd03045 GST_N_Delta_Epsilon GS 99.5 3.1E-13 6.7E-18 107.4 8.8 73 5-79 1-74 (74)
36 cd03185 GST_C_Tau GST_C family 99.4 6.6E-13 1.4E-17 116.0 11.4 111 88-205 2-116 (126)
37 cd03052 GST_N_GDAP1 GST_N fami 99.4 3.3E-13 7.1E-18 107.9 8.4 72 5-78 1-73 (73)
38 cd03186 GST_C_SspA GST_N famil 99.4 8.9E-13 1.9E-17 112.2 11.5 106 87-201 1-106 (107)
39 PF02798 GST_N: Glutathione S- 99.4 2.9E-13 6.2E-18 109.0 7.9 73 4-79 2-76 (76)
40 cd03180 GST_C_2 GST_C family, 99.4 8E-13 1.7E-17 112.4 10.9 107 89-198 2-110 (110)
41 cd03177 GST_C_Delta_Epsilon GS 99.4 6.4E-13 1.4E-17 115.3 10.3 108 89-202 2-110 (118)
42 KOG1422|consensus 99.4 3.1E-12 6.7E-17 119.5 14.6 183 12-212 20-213 (221)
43 cd03191 GST_C_Zeta GST_C famil 99.4 8.4E-13 1.8E-17 114.9 9.6 114 87-203 1-118 (121)
44 cd03060 GST_N_Omega_like GST_N 99.4 9.5E-13 2.1E-17 104.2 8.6 69 5-77 1-70 (71)
45 cd03051 GST_N_GTT2_like GST_N 99.4 1E-12 2.2E-17 103.8 8.5 72 6-78 2-74 (74)
46 cd03183 GST_C_Theta GST_C fami 99.4 3E-12 6.5E-17 112.2 11.3 114 89-204 1-122 (126)
47 cd03048 GST_N_Ure2p_like GST_N 99.4 1.8E-12 3.9E-17 105.1 9.0 73 5-79 2-77 (81)
48 cd03190 GST_C_ECM4_like GST_C 99.4 3.3E-12 7.2E-17 115.1 11.6 112 88-205 3-119 (142)
49 cd03053 GST_N_Phi GST_N family 99.4 2.1E-12 4.5E-17 103.2 9.1 73 5-79 2-75 (76)
50 cd03056 GST_N_4 GST_N family, 99.4 2E-12 4.4E-17 102.1 8.6 72 5-78 1-73 (73)
51 cd03059 GST_N_SspA GST_N famil 99.4 2.3E-12 4.9E-17 102.0 8.5 69 6-79 2-71 (73)
52 cd03057 GST_N_Beta GST_N famil 99.4 2.2E-12 4.8E-17 103.5 8.5 72 6-79 2-74 (77)
53 cd03200 GST_C_JTV1 GST_C famil 99.4 1.6E-12 3.5E-17 109.4 8.1 95 74-195 1-96 (96)
54 cd03050 GST_N_Theta GST_N fami 99.4 2.5E-12 5.4E-17 103.0 8.7 73 5-79 1-74 (76)
55 cd03041 GST_N_2GST_N GST_N fam 99.4 2E-12 4.3E-17 104.2 7.5 73 5-79 2-75 (77)
56 cd03047 GST_N_2 GST_N family, 99.3 3.4E-12 7.4E-17 101.5 8.5 71 6-78 2-73 (73)
57 cd03049 GST_N_3 GST_N family, 99.3 3.5E-12 7.6E-17 101.2 8.4 69 6-78 2-73 (73)
58 cd03058 GST_N_Tau GST_N family 99.3 5.7E-12 1.2E-16 100.4 8.4 69 6-79 2-72 (74)
59 cd03042 GST_N_Zeta GST_N famil 99.3 6.2E-12 1.3E-16 99.4 8.3 71 6-78 2-73 (73)
60 cd03039 GST_N_Sigma_like GST_N 99.3 3.6E-12 7.8E-17 101.0 6.7 71 5-79 1-72 (72)
61 cd03207 GST_C_8 GST_C family, 99.3 3.5E-12 7.6E-17 107.8 6.7 100 94-203 2-101 (103)
62 cd03076 GST_N_Pi GST_N family, 99.3 4.8E-12 1E-16 100.9 7.1 70 5-79 2-72 (73)
63 PF13417 GST_N_3: Glutathione 99.3 4.4E-12 9.6E-17 101.6 6.7 68 7-79 1-69 (75)
64 cd03055 GST_N_Omega GST_N fami 99.3 1.1E-11 2.3E-16 102.8 8.9 71 4-78 18-89 (89)
65 cd03206 GST_C_7 GST_C family, 99.3 4.7E-12 1E-16 106.7 6.6 100 93-198 1-100 (100)
66 COG0435 ECM4 Predicted glutath 99.3 2.2E-11 4.8E-16 117.8 11.7 191 4-202 51-284 (324)
67 PF13409 GST_N_2: Glutathione 99.3 9.4E-12 2E-16 98.5 7.2 68 12-79 1-69 (70)
68 cd03046 GST_N_GTT1_like GST_N 99.3 1.5E-11 3.3E-16 98.0 8.4 71 6-79 2-73 (76)
69 cd03037 GST_N_GRX2 GST_N famil 99.3 1.3E-11 2.8E-16 97.5 7.8 70 6-79 2-71 (71)
70 cd03179 GST_C_1 GST_C family, 99.3 1E-11 2.2E-16 104.8 7.0 101 89-192 2-104 (105)
71 cd03209 GST_C_Mu GST_C family, 99.2 5.9E-11 1.3E-15 103.6 11.2 113 89-209 2-114 (121)
72 cd03075 GST_N_Mu GST_N family, 99.2 2E-11 4.4E-16 99.7 7.8 73 6-79 2-80 (82)
73 cd03184 GST_C_Omega GST_C fami 99.2 4.2E-11 9.1E-16 105.0 9.5 109 89-206 2-115 (124)
74 cd03203 GST_C_Lambda GST_C fam 99.2 1E-10 2.2E-15 102.3 10.5 104 86-204 1-111 (120)
75 cd03210 GST_C_Pi GST_C family, 99.2 1.3E-10 2.9E-15 102.3 10.6 119 88-215 2-123 (126)
76 cd03195 GST_C_4 GST_C family, 99.2 1.2E-10 2.7E-15 100.9 10.0 109 87-204 1-113 (114)
77 KOG2903|consensus 99.2 1E-10 2.2E-15 112.3 9.4 190 4-201 37-285 (319)
78 cd03077 GST_N_Alpha GST_N fami 99.2 1.2E-10 2.6E-15 94.3 7.9 67 5-79 2-74 (79)
79 cd03204 GST_C_GDAP1 GST_C fami 99.1 1E-10 2.3E-15 101.0 7.7 79 120-198 21-111 (111)
80 cd03061 GST_N_CLIC GST_N famil 99.1 1.1E-10 2.4E-15 97.2 7.4 63 12-79 21-84 (91)
81 PF00043 GST_C: Glutathione S- 99.1 1.6E-10 3.6E-15 95.7 7.6 74 122-196 22-95 (95)
82 cd03043 GST_N_1 GST_N family, 99.1 2E-10 4.4E-15 91.5 7.4 66 10-78 7-73 (73)
83 PF14497 GST_C_3: Glutathione 99.1 4.1E-11 8.9E-16 100.9 3.3 96 86-194 2-99 (99)
84 cd03040 GST_N_mPGES2 GST_N fam 99.1 3.4E-10 7.4E-15 90.7 8.2 70 5-79 2-74 (77)
85 cd03198 GST_C_CLIC GST_C famil 99.1 5.2E-10 1.1E-14 99.8 10.0 99 100-204 7-124 (134)
86 cd00299 GST_C_family Glutathio 99.1 2.4E-10 5.2E-15 94.5 7.2 99 94-192 2-100 (100)
87 cd00570 GST_N_family Glutathio 99.1 4.3E-10 9.3E-15 86.4 8.0 69 6-78 2-71 (71)
88 PF13410 GST_C_2: Glutathione 99.1 3.1E-10 6.8E-15 88.9 6.7 68 124-191 2-69 (69)
89 KOG4244|consensus 99.1 1.7E-09 3.7E-14 104.6 12.6 178 6-195 47-273 (281)
90 cd03038 GST_N_etherase_LigE GS 99.0 7.6E-10 1.6E-14 90.4 7.8 67 11-79 14-81 (84)
91 cd03080 GST_N_Metaxin_like GST 99.0 1.1E-09 2.4E-14 87.6 7.9 64 5-79 2-72 (75)
92 cd03208 GST_C_Alpha GST_C fami 99.0 2.1E-09 4.6E-14 96.3 10.6 111 88-205 2-116 (137)
93 COG2999 GrxB Glutaredoxin 2 [P 99.0 2.9E-09 6.2E-14 97.1 10.9 181 6-199 2-208 (215)
94 KOG3029|consensus 99.0 4E-09 8.6E-14 102.4 12.0 183 4-194 90-354 (370)
95 cd03192 GST_C_Sigma_like GST_C 99.0 1.4E-09 3E-14 91.9 7.0 100 89-192 2-104 (104)
96 KOG3027|consensus 98.9 1.3E-08 2.9E-13 94.9 13.3 175 11-195 32-248 (257)
97 cd03201 GST_C_DHAR GST_C famil 98.9 5E-09 1.1E-13 92.0 9.5 78 127-204 29-110 (121)
98 cd03194 GST_C_3 GST_C family, 98.9 1.1E-08 2.4E-13 88.7 10.9 104 94-203 4-113 (114)
99 cd03205 GST_C_6 GST_C family, 98.9 9.5E-09 2.1E-13 86.3 8.1 96 94-192 2-98 (98)
100 cd03054 GST_N_Metaxin GST_N fa 98.8 1.3E-08 2.9E-13 80.5 7.7 63 6-79 2-71 (72)
101 cd03193 GST_C_Metaxin GST_C fa 98.8 2.2E-08 4.9E-13 82.2 7.9 65 128-192 19-87 (88)
102 KOG3028|consensus 98.7 1.2E-06 2.6E-11 87.1 18.0 173 12-194 16-233 (313)
103 cd03202 GST_C_etherase_LigE GS 98.6 7.6E-08 1.7E-12 84.7 7.5 69 126-195 56-124 (124)
104 cd03079 GST_N_Metaxin2 GST_N f 98.6 1.3E-07 2.9E-12 75.7 6.9 59 11-79 15-73 (74)
105 KOG1147|consensus 98.6 5.7E-08 1.2E-12 101.7 5.7 125 62-212 43-172 (712)
106 cd03212 GST_C_Metaxin1_3 GST_C 98.3 1.6E-06 3.4E-11 77.9 6.7 71 124-194 60-134 (137)
107 cd03211 GST_C_Metaxin2 GST_C f 98.3 2.1E-06 4.5E-11 75.9 6.6 70 123-192 52-125 (126)
108 PRK10638 glutaredoxin 3; Provi 98.0 1.5E-05 3.4E-10 64.9 7.3 78 2-82 1-78 (83)
109 cd03197 GST_C_mPGES2 GST_C fam 98.0 1.7E-05 3.7E-10 71.8 6.5 64 130-194 81-145 (149)
110 TIGR02190 GlrX-dom Glutaredoxi 97.9 5.2E-05 1.1E-09 61.2 7.4 71 4-78 9-79 (79)
111 cd03078 GST_N_Metaxin1_like GS 97.8 7.4E-05 1.6E-09 59.6 7.5 57 12-79 15-71 (73)
112 cd03029 GRX_hybridPRX5 Glutare 97.6 0.00028 6E-09 55.6 7.9 71 4-78 2-72 (72)
113 PF14834 GST_C_4: Glutathione 97.6 0.00075 1.6E-08 58.1 10.8 109 86-204 1-114 (117)
114 TIGR02196 GlrX_YruB Glutaredox 97.3 0.00078 1.7E-08 52.1 6.5 70 5-77 2-73 (74)
115 cd02066 GRX_family Glutaredoxi 97.2 0.001 2.2E-08 51.1 6.6 69 5-76 2-70 (72)
116 cd03027 GRX_DEP Glutaredoxin ( 97.2 0.00095 2.1E-08 52.8 6.5 68 4-74 2-69 (73)
117 TIGR02200 GlrX_actino Glutared 97.2 0.0008 1.7E-08 53.0 5.4 66 4-71 1-67 (77)
118 cd02976 NrdH NrdH-redoxin (Nrd 97.1 0.0012 2.6E-08 51.0 5.7 62 5-69 2-63 (73)
119 cd03418 GRX_GRXb_1_3_like Glut 96.8 0.0042 9.2E-08 48.9 6.7 71 5-78 2-73 (75)
120 PRK10329 glutaredoxin-like pro 96.7 0.0048 1E-07 50.2 6.3 57 4-63 2-58 (81)
121 TIGR02181 GRX_bact Glutaredoxi 96.6 0.0061 1.3E-07 48.7 6.3 75 5-82 1-75 (79)
122 COG0695 GrxC Glutaredoxin and 96.4 0.012 2.7E-07 47.7 6.7 65 4-70 2-67 (80)
123 TIGR02194 GlrX_NrdH Glutaredox 96.4 0.0095 2.1E-07 46.9 5.9 57 5-64 1-57 (72)
124 PF10568 Tom37: Outer mitochon 96.2 0.02 4.4E-07 45.6 6.9 57 12-78 13-72 (72)
125 cd03419 GRX_GRXh_1_2_like Glut 96.0 0.026 5.7E-07 45.0 7.1 77 5-82 2-79 (82)
126 PRK11200 grxA glutaredoxin 1; 96.0 0.028 6E-07 45.7 7.0 73 4-79 2-81 (85)
127 TIGR02189 GlrX-like_plant Glut 95.8 0.031 6.8E-07 47.2 6.9 77 4-82 9-87 (99)
128 PF04399 Glutaredoxin2_C: Glut 95.4 0.039 8.5E-07 49.2 6.3 68 126-198 57-124 (132)
129 TIGR02180 GRX_euk Glutaredoxin 95.3 0.064 1.4E-06 42.8 6.7 75 5-82 1-80 (84)
130 PF00462 Glutaredoxin: Glutare 95.1 0.02 4.3E-07 43.3 3.0 59 5-66 1-59 (60)
131 TIGR02183 GRXA Glutaredoxin, G 95.1 0.095 2.1E-06 42.9 7.1 72 5-79 2-80 (86)
132 PHA03050 glutaredoxin; Provisi 94.4 0.17 3.7E-06 43.5 7.3 71 4-76 14-89 (108)
133 cd03199 GST_C_GRX2 GST_C famil 94.3 0.18 4E-06 44.6 7.5 65 128-197 60-124 (128)
134 TIGR00365 monothiol glutaredox 93.5 0.32 7E-06 40.8 7.2 76 4-82 13-93 (97)
135 cd03028 GRX_PICOT_like Glutare 93.0 0.45 9.7E-06 39.2 7.2 74 4-80 9-87 (90)
136 COG4545 Glutaredoxin-related p 92.3 0.42 9.1E-06 38.2 5.6 66 2-68 1-77 (85)
137 KOG1668|consensus 90.4 0.14 3.1E-06 49.4 1.7 59 134-199 10-68 (231)
138 PRK12759 bifunctional gluaredo 90.3 0.89 1.9E-05 48.3 7.7 70 2-75 1-79 (410)
139 PRK10026 arsenate reductase; P 88.0 0.66 1.4E-05 41.9 4.1 34 2-36 1-34 (141)
140 cd03031 GRX_GRX_like Glutaredo 87.7 1.9 4.1E-05 39.2 6.9 72 5-79 2-83 (147)
141 PF09635 MetRS-N: MetRS-N bind 86.4 0.81 1.8E-05 40.0 3.6 24 56-79 36-60 (122)
142 cd02973 TRX_GRX_like Thioredox 86.4 2.2 4.8E-05 32.4 5.8 58 4-68 2-64 (67)
143 COG1393 ArsC Arsenate reductas 82.8 1.6 3.5E-05 38.1 3.9 32 4-36 2-33 (117)
144 cd03036 ArsC_like Arsenate Red 80.6 2.2 4.7E-05 36.7 3.9 31 5-36 1-31 (111)
145 cd02977 ArsC_family Arsenate R 80.2 2.1 4.6E-05 36.1 3.7 31 5-36 1-31 (105)
146 cd03032 ArsC_Spx Arsenate Redu 79.9 2.7 5.9E-05 36.2 4.3 31 5-36 2-32 (115)
147 PRK10824 glutaredoxin-4; Provi 79.7 6.1 0.00013 34.4 6.4 75 4-81 16-95 (115)
148 PRK01655 spxA transcriptional 79.5 2.6 5.7E-05 37.3 4.2 31 5-36 2-32 (131)
149 PRK13344 spxA transcriptional 76.0 3.8 8.3E-05 36.4 4.2 31 5-36 2-32 (132)
150 PRK12559 transcriptional regul 74.8 4.3 9.3E-05 36.1 4.2 31 5-36 2-32 (131)
151 cd03033 ArsC_15kD Arsenate Red 74.4 4.4 9.5E-05 35.1 4.0 31 5-36 2-32 (113)
152 TIGR01617 arsC_related transcr 73.9 4.1 8.9E-05 35.2 3.8 31 5-36 1-31 (117)
153 PRK10853 putative reductase; P 73.5 4.3 9.3E-05 35.4 3.8 31 5-36 2-32 (118)
154 KOG1752|consensus 73.4 13 0.00029 31.7 6.6 76 4-83 15-94 (104)
155 PTZ00062 glutaredoxin; Provisi 72.5 13 0.00028 35.6 7.2 75 4-81 114-193 (204)
156 cd03035 ArsC_Yffb Arsenate Red 72.1 5 0.00011 34.2 3.8 31 5-36 1-31 (105)
157 TIGR01616 nitro_assoc nitrogen 70.5 6.2 0.00013 34.9 4.1 32 4-36 2-33 (126)
158 PF05768 DUF836: Glutaredoxin- 68.6 23 0.0005 28.3 6.8 54 4-63 1-57 (81)
159 cd03034 ArsC_ArsC Arsenate Red 64.4 8.8 0.00019 32.9 3.8 31 5-36 1-31 (112)
160 TIGR00014 arsC arsenate reduct 64.0 9 0.00019 33.0 3.8 31 5-36 1-31 (114)
161 PF11801 Tom37_C: Tom37 C-term 59.9 14 0.00029 34.4 4.4 37 133-169 113-153 (168)
162 TIGR00412 redox_disulf_2 small 56.7 45 0.00097 26.2 6.4 56 4-68 2-61 (76)
163 KOG0867|consensus 54.7 3.6 7.9E-05 39.9 -0.4 80 128-211 91-171 (226)
164 TIGR00411 redox_disulf_1 small 53.7 60 0.0013 25.0 6.7 55 5-65 3-62 (82)
165 cd01659 TRX_superfamily Thiore 48.3 43 0.00092 23.0 4.7 55 6-63 2-61 (69)
166 cd03026 AhpF_NTD_C TRX-GRX-lik 46.3 50 0.0011 27.0 5.3 57 4-67 15-76 (89)
167 PF13192 Thioredoxin_3: Thiore 41.6 60 0.0013 25.4 4.9 56 4-68 2-61 (76)
168 cd03030 GRX_SH3BGR Glutaredoxi 40.2 1.3E+02 0.0028 25.0 6.8 68 5-75 2-79 (92)
169 PHA02125 thioredoxin-like prot 37.4 95 0.0021 24.1 5.5 50 5-60 2-51 (75)
170 PF11287 DUF3088: Protein of u 31.2 53 0.0012 28.4 3.2 27 53-79 66-105 (112)
171 PF03960 ArsC: ArsC family; I 31.2 49 0.0011 28.0 3.0 28 8-36 1-28 (110)
172 PF13418 Kelch_4: Galactose ox 27.0 46 0.00099 23.4 1.8 29 418-446 15-44 (49)
173 PF12569 NARP1: NMDA receptor- 23.7 43 0.00092 36.8 1.6 25 180-204 356-380 (517)
174 PF09868 DUF2095: Uncharacteri 23.1 24 0.00052 30.7 -0.4 27 263-289 2-28 (128)
175 PHA03236 DNA packaging protein 22.1 56 0.0012 28.9 1.7 49 294-344 24-79 (127)
No 1
>KOG1627|consensus
Probab=100.00 E-value=2.4e-68 Score=463.70 Aligned_cols=158 Identities=63% Similarity=1.174 Sum_probs=151.0
Q ss_pred CCCCCCCCCCCCcccccccccccCc-ccchhhhhhhcCCCCceEEEEEeeCCccceeeeeechhhhHHhhhHHHHhhhhc
Q psy6388 266 DPFDLLPKGTFNMEDFKRFYSNNDE-AKSIPYFWEKFDKENYSIWFGEYKYPEELQKVFMSCNLITGMFQRLDKMRKQTF 344 (480)
Q Consensus 266 ~p~~~~~~~~~~~d~~k~~y~n~~~-~~~~~~~~~~~~~~~~s~w~~~yky~~e~~~~fm~~nli~g~~qr~~~~~k~~f 344 (480)
||||+||+++|++|+|||.|||.|+ .+||||||+|||+|+||||+|+||||+||+++|||||||+|||
T Consensus 1 ~pl~~lp~~~Fvldd~kr~ySn~dt~~~a~P~f~e~~d~e~ys~w~~~Yky~eeL~~~fms~nli~g~~----------- 69 (160)
T KOG1627|consen 1 DPLDLLPKSTFVLDDWKRKYSNEDTREVALPWFWEHFDPEGYSLWKVDYKYNEELTLTFMSCNLIGGFF----------- 69 (160)
T ss_pred CchhhCCCCccchhhhhhhhcccccccccchHHHHHhCcccceeeeccccCchHHHHHHHHhhhhhHHH-----------
Confidence 7999999999999999999999998 5999999999999999999999999999999999999997555
Q ss_pred ceeeeeccCCCCceeeEEEeeccccccCCchhhhhhhhchhhhhHhhhHHhhhhhhceeEEEeccCCCCceeEEEEEecc
Q psy6388 345 ASVCLFGTDNDSTISGVWVWRGQELAFNPDELQKVFMSCNLITGMFQRLDKMRKQAFASVCLFGTDNDSTISGVWVWRGQ 424 (480)
Q Consensus 345 ~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~g~~qr~~~~~k~~~~~~~~~g~~~~~~i~g~~~~~g~ 424 (480)
|||+++|||+||++++||++++++|+|+|++|||
T Consensus 70 ----------------------------------------------qrl~~~rk~~f~~~~~~g~~~~~~i~g~~~~rg~ 103 (160)
T KOG1627|consen 70 ----------------------------------------------QRLDKSRKYAFGSMVLFGENGNSTISGAWVFRGQ 103 (160)
T ss_pred ----------------------------------------------HHHHHHHHhhheeEEEeccCCCCcceEEEEEecc
Confidence 5555589999999999999999999999999999
Q ss_pred ccccccCCCcCCcccceeeEEcCCCCHHHHHHHHHHhcccCC-CCCCcccccccccC
Q psy6388 425 ELAFNLSPDWKVDYESYDWKKLDPEAKETKNLVAQYFSWDGT-DSKGRKFNQGKIFK 480 (480)
Q Consensus 425 ~~~~~~~~~~~~~~~~y~~~kld~~~~~~k~~~~~~~~~~~~-~~~g~~~~~~k~~k 480 (480)
|++|.++|||++|||||+||||||+++|+|++|++||+|+++ ++.||.|+||||||
T Consensus 104 ela~~~spDwq~D~EsY~~tKLD~~see~k~~V~ey~sWeg~f~~~Gkaf~qgKi~K 160 (160)
T KOG1627|consen 104 ELAPAFSPDWQPDYESYTWTKLDPGSEETKELVNEYFSWEGPFEGNGKAFNDGKIFK 160 (160)
T ss_pred ccccccCccccccccceeeeecCCCCHHHHHHHHHHHhhcccccccchhhhcccccC
Confidence 999999999999999999999999999999999999999998 78889999999998
No 2
>PF00647 EF1G: Elongation factor 1 gamma, conserved domain; InterPro: IPR001662 Translation elongation factors are responsible for two main processes during protein synthesis on the ribosome [, , ]. EF1A (or EF-Tu) is responsible for the selection and binding of the cognate aminoacyl-tRNA to the A-site (acceptor site) of the ribosome. EF2 (or EF-G) is responsible for the translocation of the peptidyl-tRNA from the A-site to the P-site (peptidyl-tRNA site) of the ribosome, thereby freeing the A-site for the next aminoacyl-tRNA to bind. Elongation factors are responsible for achieving accuracy of translation and both EF1A and EF2 are remarkably conserved throughout evolution. Elongation factor EF1B (also known as EF-Ts or EF-1beta/gamma/delta) is a nucleotide exchange factor that is required to regenerate EF1A from its inactive form (EF1A-GDP) to its active form (EF1A-GTP). EF1A is then ready to interact with a new aminoacyl-tRNA to begin the cycle again. EF1B is more complex in eukaryotes than in bacteria, and can consist of three subunits: EF1B-alpha (or EF-1beta), EF1B-gamma (or EF-1gamma) and EF1B-beta (or EF-1delta) []. This entry represents a conserved domain usually found near the C terminus of EF1B-gamma chains, a peptide of 410-440 residues. The gamma chain appears to play a role in anchoring the EF1B complex to the beta and delta chains and to other cellular components. More information about these proteins can be found at Protein of the Month: Elongation Factors [].; GO: 0003746 translation elongation factor activity, 0006414 translational elongation, 0005853 eukaryotic translation elongation factor 1 complex; PDB: 1PBU_A.
Probab=100.00 E-value=7.6e-56 Score=372.79 Aligned_cols=106 Identities=59% Similarity=1.173 Sum_probs=82.3
Q ss_pred CCCCCCCCCCCCCCCcccccccccccCc-ccchhhhhhhcCCCCceEEEEEeeCCccceeeeeechhhhHHhhhHHHHhh
Q psy6388 263 KSKDPFDLLPKGTFNMEDFKRFYSNNDE-AKSIPYFWEKFDKENYSIWFGEYKYPEELQKVFMSCNLITGMFQRLDKMRK 341 (480)
Q Consensus 263 K~k~p~~~~~~~~~~~d~~k~~y~n~~~-~~~~~~~~~~~~~~~~s~w~~~yky~~e~~~~fm~~nli~g~~qr~~~~~k 341 (480)
|+|||||+||+++|+||+|||.|||+|+ ++||||||||||+||||||+|+||||+||+++|||||||||||||||++||
T Consensus 1 K~k~Pl~~lp~s~f~lD~wKr~YSN~d~~~~a~p~Fwe~~d~eg~Slw~~~Yky~~El~~~fmt~Nli~Gf~QRle~~rK 80 (107)
T PF00647_consen 1 KPKNPLDLLPKSTFVLDEWKRKYSNEDTRTVAMPWFWENFDPEGYSLWFCDYKYNDELTMTFMTCNLIGGFFQRLEKLRK 80 (107)
T ss_dssp ----GGGSS----S-HHHHHHHHHHS-GGGTHHHHHHSS--TTT-EEEEE--S-GGG---STTHHHHHHHHHHHGGGTGG
T ss_pred CCCChHHHCCCCCCCHHHhhhhhcCCCchhhHHHHHHHhCCccccEEEEEecCChhhhccceeehhHHHHHHHHHHHHhh
Confidence 6899999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred hhcceeeeeccCCCCceeeEEEeeccc
Q psy6388 342 QTFASVCLFGTDNDSTISGVWVWRGQE 368 (480)
Q Consensus 342 ~~f~~~~~~g~~~~~~i~~~~~~~~~~ 368 (480)
||||+|+|+|++++++|+|||+|||||
T Consensus 81 ~aFg~~~v~G~~~~~~I~Gvwv~rG~e 107 (107)
T PF00647_consen 81 YAFGSMSVFGEDNNSDISGVWVFRGQE 107 (107)
T ss_dssp GEEE--EEES-STT-EEEEEEEESSSS
T ss_pred hheeEEEEEecCCCCceEEEEEEecCC
Confidence 999999999999999999999999996
No 3
>PLN02473 glutathione S-transferase
Probab=99.96 E-value=9.5e-29 Score=236.64 Aligned_cols=198 Identities=22% Similarity=0.273 Sum_probs=160.6
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhcC--
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVANE-- 80 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~~-- 80 (480)
.+|||+++.++++++|+++++++|++|+. .++...+ ++.+++|+++||+|+||+|++ +|.+|+||.||++||++.
T Consensus 2 ~~kLy~~~~s~~~~rv~~~L~e~gi~ye~~~v~~~~~-~~~~~~~~~~nP~g~vP~L~~-~g~~l~ES~aI~~YL~~~~~ 79 (214)
T PLN02473 2 VVKVYGQIKAANPQRVLLCFLEKGIEFEVIHVDLDKL-EQKKPEHLLRQPFGQVPAIED-GDLKLFESRAIARYYATKYA 79 (214)
T ss_pred ceEEecCCCCCchHHHHHHHHHcCCCceEEEecCccc-ccCCHHHHhhCCCCCCCeEEE-CCEEEEehHHHHHHHHHHcC
Confidence 57999999999999999999999999998 4454333 467899999999999999996 778999999999999871
Q ss_pred ----CCCCCCHHHHHHHHHHHHHHhhhhhhHHHHh-----hhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCCccc
Q psy6388 81 ----QLKGKTEAEKSKIFDYVCFAQDELLPNACRW-----VFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLV 151 (480)
Q Consensus 81 ----~Llg~t~~e~A~V~qwl~f~~~~l~~~~~~~-----~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLv 151 (480)
+|+|.++.+++++++|+.+..+.+.+..... +.+..+ .+.+....+.....+.+.++.||++|++++||+
T Consensus 80 ~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~ 158 (214)
T PLN02473 80 DQGTDLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRLG-EPCDVALVEELKVKFDKVLDVYENRLATNRYLG 158 (214)
T ss_pred CcCCCCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhccccc-CCCChHHHHHHHHHHHHHHHHHHHHhccCCccc
Confidence 5899999999999999998877665432211 111111 234455667778899999999999999999999
Q ss_pred CCCCChhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcChhHHHHhhh
Q psy6388 152 GDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGE 204 (480)
Q Consensus 152 Ge~lTlADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~ 204 (480)
|+++|+|||++++.+.++........+.+.||+|.+|+++|.++|.+++++..
T Consensus 159 Gd~~t~ADi~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~~~~~ 211 (214)
T PLN02473 159 GDEFTLADLTHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211 (214)
T ss_pred CCCCCHHHHHHHHHHHHHHhccccHHHHhcCHHHHHHHHHHhcChhhHHHHHH
Confidence 99999999999999877643211122357899999999999999999998865
No 4
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.96 E-value=6.1e-29 Score=238.59 Aligned_cols=197 Identities=18% Similarity=0.215 Sum_probs=155.6
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEE----CCC--ceeeCHHHHHHHH
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFES----SDG--TILTSSSAITYFV 77 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~----~dG--~~L~ES~AIa~YL 77 (480)
+|||+.+ ++++++|+++++++||+|+. .++...+ ++.+++|+++||.|+||+|++ ++| .+|+||.||++||
T Consensus 2 ~~Ly~~~-~~~~~~v~~~L~e~gl~~e~~~v~~~~~-~~~~~~~~~iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL 79 (215)
T PRK13972 2 IDLYFAP-TPNGHKITLFLEEAELDYRLIKVDLGKG-GQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYL 79 (215)
T ss_pred eEEEECC-CCChHHHHHHHHHcCCCcEEEEecCccc-ccCCHHHHhhCcCCCCCEEEeCCCCCCCCceeEEcHHHHHHHH
Confidence 5999987 78999999999999999998 4444322 456789999999999999997 245 4799999999999
Q ss_pred hc--CCCCCCCHHHHHHHHHHHHHHhhhhhhHHHHhhhhhcc--cCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccCC
Q psy6388 78 AN--EQLKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILE--IYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGD 153 (480)
Q Consensus 78 ~~--~~Llg~t~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g--~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe 153 (480)
++ ..|.|.++.+++++++|+.|+.+.+.+..... .... .....+...+.....+.+.+..||++|.+++||+|+
T Consensus 80 ~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd 157 (215)
T PRK13972 80 AEKTGLFLSHETRERAATLQWLFWQVGGLGPMLGQN--HHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGE 157 (215)
T ss_pred HHhcCCCCCCCHHHHHHHHHHHHHHhhccCcceeee--eeeeccCCCCCchHHHHHHHHHHHHHHHHHHHhccCccccCC
Confidence 98 34677889999999999999987776543211 0011 111234556667788999999999999999999999
Q ss_pred CCChhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcChhHHHHhhhhhhh
Q psy6388 154 YITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGEVKLC 208 (480)
Q Consensus 154 ~lTlADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~~~~~ 208 (480)
++|+|||++++.+........+ ...||+|.+|+++|.++|+|+.++....+.
T Consensus 158 ~~t~ADi~l~~~~~~~~~~~~~---~~~~P~l~~w~~r~~~rp~~~~~~~~~~~~ 209 (215)
T PRK13972 158 NYSIADIACWPWVNAWTRQRID---LAMYPAVKNWHERIRSRPATGQALLKAQLG 209 (215)
T ss_pred CCCHHHHHHHHHHHHHhhcCCc---chhCHHHHHHHHHHHhCHHHHHHHHHhccc
Confidence 9999999998877554333222 468999999999999999999988765544
No 5
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.96 E-value=3.1e-28 Score=233.31 Aligned_cols=188 Identities=15% Similarity=0.177 Sum_probs=155.1
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc---
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN--- 79 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~--- 79 (480)
.+|||+++.|+++++|+++++++|++|++ .++. .+++++|+++||.|+||+|++ +|.+|+||.||++||++
T Consensus 10 ~~~Ly~~~~s~~~~rv~~~L~e~gl~~e~~~v~~----~~~~~~~~~~nP~g~VPvL~~-~g~~l~ES~AIl~YL~~~~~ 84 (211)
T PRK09481 10 VMTLFSGPTDIYSHQVRIVLAEKGVSVEIEQVEK----DNLPQDLIDLNPYQSVPTLVD-RELTLYESRIIMEYLDERFP 84 (211)
T ss_pred eeEEeCCCCChhHHHHHHHHHHCCCCCEEEeCCc----ccCCHHHHHhCCCCCCCEEEE-CCEEeeCHHHHHHHHHHhCC
Confidence 37999999999999999999999999998 4443 356789999999999999995 78899999999999998
Q ss_pred -CCCCCCCHHHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChh
Q psy6388 80 -EQLKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLA 158 (480)
Q Consensus 80 -~~Llg~t~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlA 158 (480)
..|+|.++.+++++++|+.+....+....... . ..+....+.+.+.+.+.+..||++|.+++||+|+++|+|
T Consensus 85 ~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~A 157 (211)
T PRK09481 85 HPPLMPVYPVARGESRLMMHRIEKDWYSLMNKI----V---NGSASEADAARKQLREELLAIAPVFGEKPYFMSEEFSLV 157 (211)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH----h---cCCHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCccHH
Confidence 36999999999999999998776553322211 1 122345667788899999999999999999999999999
Q ss_pred hhhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcChhHHHHhhh
Q psy6388 159 DICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGE 204 (480)
Q Consensus 159 DI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~ 204 (480)
||++++.+.+.....++.. ...||+|.+|+++|.++|.+++++..
T Consensus 158 D~~l~~~~~~~~~~~~~~~-~~~~p~l~~w~~~~~~rp~~~~~~~~ 202 (211)
T PRK09481 158 DCYLAPLLWRLPVLGIELS-GPGAKELKGYMTRVFERDSFLASLTE 202 (211)
T ss_pred HHHHHHHHHHHHhcCCCCC-CCCChhHHHHHHHHhccHHHHHHcCH
Confidence 9999999877643333221 25799999999999999999998764
No 6
>PLN02395 glutathione S-transferase
Probab=99.96 E-value=3.8e-28 Score=232.52 Aligned_cols=200 Identities=18% Similarity=0.297 Sum_probs=159.9
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc--C
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN--E 80 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~--~ 80 (480)
++|||+.+. ++++++++++.++|++|+. .++...+ ++++++|+++||+|+||+|++ +|.+|+||.||++||++ .
T Consensus 2 ~~~ly~~~~-~~~~rv~~~L~e~gl~~e~~~v~~~~~-~~~~~~~~~~nP~g~vP~L~~-~~~~l~ES~aI~~YL~~~~~ 78 (215)
T PLN02395 2 VLKVYGPAF-ASPKRALVTLIEKGVEFETVPVDLMKG-EHKQPEYLALQPFGVVPVIVD-GDYKIFESRAIMRYYAEKYR 78 (215)
T ss_pred eEEEEcCCc-CcHHHHHHHHHHcCCCceEEEeccccC-CcCCHHHHhhCCCCCCCEEEE-CCEEEEcHHHHHHHHHHHcC
Confidence 589999665 5799999999999999998 4444332 467889999999999999996 66799999999999997 1
Q ss_pred ----CCCCCCHHHHHHHHHHHHHHhhhhhhHHHHhhhhh-cc---cCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccC
Q psy6388 81 ----QLKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPI-LE---IYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVG 152 (480)
Q Consensus 81 ----~Llg~t~~e~A~V~qwl~f~~~~l~~~~~~~~~p~-~g---~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvG 152 (480)
.|+|.++.+++++++|+++....+.+.+....... .+ ..+.+.+..+...+.+.+.++.||++|++++||+|
T Consensus 79 ~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G 158 (215)
T PLN02395 79 SQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHILFASKMGFPADEKVIKESEEKLAKVLDVYEARLSKSKYLAG 158 (215)
T ss_pred CCCcCcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHhcCCccccC
Confidence 59999999999999999998877765544332211 11 12334556677888999999999999999999999
Q ss_pred CCCChhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcChhHHHHhhhhh
Q psy6388 153 DYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGEVK 206 (480)
Q Consensus 153 e~lTlADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~~~ 206 (480)
+++|+|||++++.+.+..........+..+|+|.+|+++|.++|.++++++...
T Consensus 159 ~~~s~ADi~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~rp~~k~~~~~~~ 212 (215)
T PLN02395 159 DFVSLADLAHLPFTEYLVGPIGKAYLIKDRKHVSAWWDDISSRPAWKEVLAKYS 212 (215)
T ss_pred CCcCHHHHHHHHHHHHHhcccchhhhhccCchHHHHHHHHHcChHHHHHHHHhc
Confidence 999999999998876653211122236789999999999999999999987643
No 7
>KOG0867|consensus
Probab=99.96 E-value=3.1e-28 Score=236.19 Aligned_cols=200 Identities=29% Similarity=0.388 Sum_probs=177.3
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc---
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN--- 79 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~--- 79 (480)
.++||+++.++++++++++++++|++++. .++.. +.++.+++|+++||.|+||+|++ +|..++||.||++||++
T Consensus 2 ~~~ly~~~~s~~~r~vl~~~~~~~l~~e~~~v~~~-~ge~~~pefl~~nP~~kVP~l~d-~~~~l~eS~AI~~Yl~~ky~ 79 (226)
T KOG0867|consen 2 KLKLYGHLGSPPARAVLIAAKELGLEVELKPVDLV-KGEQKSPEFLKLNPLGKVPALED-GGLTLWESHAILRYLAEKYG 79 (226)
T ss_pred CceEeecCCCcchHHHHHHHHHcCCceeEEEeecc-ccccCCHHHHhcCcCCCCCeEec-CCeEEeeHHHHHHHHHHHcC
Confidence 57999999999999999999999999999 55554 55689999999999999999996 59999999999999988
Q ss_pred --CC-CCCCCHHHHHHHHHHHHHHhhhhhhH--HHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCC
Q psy6388 80 --EQ-LKGKTEAEKSKIFDYVCFAQDELLPN--ACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDY 154 (480)
Q Consensus 80 --~~-Llg~t~~e~A~V~qwl~f~~~~l~~~--~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~ 154 (480)
.. |+|.++.+||.|+||+.+..+.+.+. ...++.|.+...+.+..........+.+++..+|++|.++.||+|++
T Consensus 80 ~~~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g~~ 159 (226)
T KOG0867|consen 80 PLGGILLPKDLKERAIVDQWLEFENGVLDPVTFERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKTQVYLAGDQ 159 (226)
T ss_pred CCCcccCCcCHHHHHHHHHHHHhhhcccccccccceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHccCCcccCCc
Confidence 23 99999999999999999999999887 45777886666788999999999999999999999999999999999
Q ss_pred CChhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcChhHHHHhhhh
Q psy6388 155 ITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGEV 205 (480)
Q Consensus 155 lTlADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~~ 205 (480)
+|+||+.+++.+..+.....+.....+||++.||++++.++|.+++..+..
T Consensus 160 ~tlADl~~~~~~~~~~~~~~~~~~~~~~p~v~~W~~~~~~~P~~~e~~~~~ 210 (226)
T KOG0867|consen 160 LTLADLSLASTLSQFQGKFATEKDFEKYPKVARWYERIQKRPAYEEANEKG 210 (226)
T ss_pred ccHHHHHHhhHHHHHhHhhhhhhhhhhChHHHHHHHHHHhCccHHHHHHHH
Confidence 999999999999988522224556789999999999999999988876553
No 8
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.96 E-value=5.3e-28 Score=228.92 Aligned_cols=190 Identities=17% Similarity=0.277 Sum_probs=153.7
Q ss_pred EEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc----C
Q psy6388 6 TLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN----E 80 (480)
Q Consensus 6 tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~----~ 80 (480)
+||+.+.+ ++++++++++++||+|+. .+++..+....+++|+++||.|+||+|+++||.+|+||.||++||++ .
T Consensus 2 ~l~~~~~s-~~~~~~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~~~ 80 (201)
T PRK10542 2 KLFYKPGA-CSLASHITLRESGLDFTLVSVDLAKKRLENGDDYLAINPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDR 80 (201)
T ss_pred ceeecccH-HHHHHHHHHHHcCCCceEEEeecccccccCChHHHHhCcCCCCCeEEeCCCcEeecHHHHHHHHHHhCccc
Confidence 89998755 899999999999999998 55554333345689999999999999997788999999999999987 2
Q ss_pred CCC-CCCHHHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhh
Q psy6388 81 QLK-GKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLAD 159 (480)
Q Consensus 81 ~Ll-g~t~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlAD 159 (480)
.|+ |.++.+++++++|+.++.+++.+.+...+.+ .......+...+.+.+.++.||++|.+++||+|+++|+||
T Consensus 81 ~l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~AD 155 (201)
T PRK10542 81 QLLAPVGSLSRYHTIEWLNYIATELHKGFTPLFRP-----DTPEEYKPTVRAQLEKKFQYVDEALADEQWICGQRFTIAD 155 (201)
T ss_pred ccCCCCCcHHHHHHHHHHHHHHhhhhhhhhhccCC-----CChHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCCcHHh
Confidence 455 5678999999999999887776544332221 1112334566788999999999999999999999999999
Q ss_pred hhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcChhHHHHhhh
Q psy6388 160 ICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGE 204 (480)
Q Consensus 160 I~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~ 204 (480)
|++++.+.+......+ ...+|+|.+|+++|.++|.|++++..
T Consensus 156 i~l~~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~k~~~~~ 197 (201)
T PRK10542 156 AYLFTVLRWAYAVKLN---LEGLEHIAAYMQRVAERPAVAAALKA 197 (201)
T ss_pred HHHHHHHHHhhccCCC---cccchHHHHHHHHHHcCHHHHHHHHH
Confidence 9999988876443322 46899999999999999999998865
No 9
>PRK15113 glutathione S-transferase; Provisional
Probab=99.95 E-value=3.9e-27 Score=226.18 Aligned_cols=193 Identities=15% Similarity=0.151 Sum_probs=152.2
Q ss_pred ceEEEEcC--CCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc-
Q psy6388 4 SGTLYSWP--DNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN- 79 (480)
Q Consensus 4 ~~tLY~~~--~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~- 79 (480)
.++||+.+ .|+++++++++++++||+|+. .+++..+ +...++|+++||.|+||+|++ ||.+|+||.||++||++
T Consensus 5 ~~~Ly~~~~~~s~~~~rv~~~l~e~gi~~e~~~v~~~~~-~~~~~~~~~~nP~g~VP~L~~-~~~~l~ES~aI~~YL~~~ 82 (214)
T PRK15113 5 AITLYSDAHFFSPYVMSAFVALQEKGLPFELKTVDLDAG-EHLQPTYQGYSLTRRVPTLQH-DDFELSESSAIAEYLEER 82 (214)
T ss_pred eEEEEeCCCCCCchHHHHHHHHHHcCCCCeEEEeCCCCc-cccCHHHHhcCCCCCCCEEEE-CCEEEecHHHHHHHHHHH
Confidence 36999975 699999999999999999998 5555333 356799999999999999996 67899999999999998
Q ss_pred ---CC---CCCCCHHHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccC-CCcccC
Q psy6388 80 ---EQ---LKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLT-RTYLVG 152 (480)
Q Consensus 80 ---~~---Llg~t~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~-~tFLvG 152 (480)
.. |+|.++.+++++++|+.++.+++.+.........+.....++...+...+.+.+.+..||++|++ ..||+|
T Consensus 83 ~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G 162 (214)
T PRK15113 83 FAPPAWERIYPADLQARARARQIQAWLRSDLMPLREERPTDVVFAGAKKAPLSEAGKAAAEKLFAVAERLLAPGQPNLFG 162 (214)
T ss_pred cCCCCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCccchhccCCCCCcccHHHHHHHHHHHHHHHHHHhcCCCEeeC
Confidence 22 99999999999999999998776543211111111111223344566778899999999999975 469999
Q ss_pred CCCChhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcChhHHHHhhh
Q psy6388 153 DYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGE 204 (480)
Q Consensus 153 e~lTlADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~ 204 (480)
+ +|+|||++++.+.++.....+ . .|+|.+|+++|.++|.|+.+++.
T Consensus 163 ~-~TlADi~l~~~l~~~~~~~~~---~--~p~l~~~~~r~~~rp~~~~~~~~ 208 (214)
T PRK15113 163 E-WCIADTDLALMLNRLVLHGDE---V--PERLADYATFQWQRASVQRWLAL 208 (214)
T ss_pred C-ccHHHHHHHHHHHHHHHcCCC---C--CHHHHHHHHHHhcCHHHHHHHHH
Confidence 6 999999999998876432221 1 29999999999999999999876
No 10
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.95 E-value=4.8e-27 Score=222.88 Aligned_cols=193 Identities=13% Similarity=0.095 Sum_probs=153.8
Q ss_pred EEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc----C
Q psy6388 6 TLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN----E 80 (480)
Q Consensus 6 tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~----~ 80 (480)
+||+++.||++++|+++++++||+|+. .++. ....+++.+.||.|+||+|+++||.+|+||.||++||++ .
T Consensus 2 ~Ly~~~~s~~~~~v~~~L~~~gv~ye~~~~~~----~~~~~~~~~~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~~ 77 (202)
T PRK10357 2 KLIGSYTSPFVRKISILLLEKGITFEFVNELP----YNADNGVAQYNPLGKVPALVTEEGECWFDSPIIAEYIELLNVAP 77 (202)
T ss_pred eeecCCCCchHHHHHHHHHHcCCCCeEEecCC----CCCchhhhhcCCccCCCeEEeCCCCeeecHHHHHHHHHHhCCCC
Confidence 899999999999999999999999998 3332 123467778899999999997788999999999999998 2
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhh
Q psy6388 81 QLKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADI 160 (480)
Q Consensus 81 ~Llg~t~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI 160 (480)
.|+|.++.+++++++|+.++.+.+...................+..+.....+.+.|+.||++|.++. |+|+++|+|||
T Consensus 78 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi 156 (202)
T PRK10357 78 AMLPRDPLAALRVRQLEALADGIMDAALVSVREQARPAAQQSEDELLRQREKINRSLDALEGYLVDGT-LKTDTVNLATI 156 (202)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHHHHHHhhccCc-ccCCCcCHHHH
Confidence 58999999999999999987766544433222221111122344556778899999999999999888 99999999999
Q ss_pred hHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcChhHHHHhh
Q psy6388 161 CNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVG 203 (480)
Q Consensus 161 ~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~ 203 (480)
++++.+.++.....+..+...||+|.+|+++|.++|.|+.+..
T Consensus 157 ~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~i~~rp~~~~~~~ 199 (202)
T PRK10357 157 AIACAVGYLNFRRVAPGWCVDRPHLVKLVENLFQRESFARTEP 199 (202)
T ss_pred HHHHHHHHHHhcccCcchhhcChHHHHHHHHHhcChhhhhcCC
Confidence 9999988764333333345689999999999999999998654
No 11
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.95 E-value=4e-27 Score=224.41 Aligned_cols=195 Identities=20% Similarity=0.310 Sum_probs=153.2
Q ss_pred EEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc----C
Q psy6388 6 TLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN----E 80 (480)
Q Consensus 6 tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~----~ 80 (480)
+||+++.||+++++++++.++||+|+. .++.....+...++|+++||.|+||+|++ ||.+|+||.||++||++ .
T Consensus 1 ~Ly~~~~s~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~nP~g~vP~L~~-~g~~l~ES~aI~~yl~~~~~~~ 79 (210)
T TIGR01262 1 KLYSYWRSSCSYRVRIALALKGIDYEYVPVNLLRDGEQRSPEFLALNPQGLVPTLDI-DGEVLTQSLAIIEYLEETYPDP 79 (210)
T ss_pred CcccCCCCCchHHHHHHHHHCCCCceEEecccccccccCChhhhhcCCCCcCCEEEE-CCEEeecHHHHHHHHHHhCCCC
Confidence 589888999999999999999999998 33331112345788999999999999996 78999999999999998 2
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhhhhHHHHhhhhhcc-c-CCCChHhHHHHHHHHHHHHHHHHHHccCC--CcccCCCCC
Q psy6388 81 QLKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILE-I-YPYNKQTVDSAKDGLKRNLAKLDKHLLTR--TYLVGDYIT 156 (480)
Q Consensus 81 ~Llg~t~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g-~-~~~nk~~~~~a~~~l~~~L~~Le~~L~~~--tFLvGe~lT 156 (480)
.|+|.++.+++++++|+.++.+++.+.....+...+. . ........+.+.+.+.+.|+.||++|.++ .||+|+++|
T Consensus 80 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T 159 (210)
T TIGR01262 80 PLLPADPIKRARVRALALLIACDIHPLNNLRVLQYLREKLGVEEEARNRWYQHWISKGFAALEALLQPHAGAFCVGDTPT 159 (210)
T ss_pred CCCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCC
Confidence 6999999999999999999877765432211111111 1 11222334446677999999999999864 499999999
Q ss_pred hhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcChhHHHHhhh
Q psy6388 157 LADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGE 204 (480)
Q Consensus 157 lADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~ 204 (480)
+|||++++.+.+......+ ...||+|.+|+++|.++|.+++++..
T Consensus 160 ~ADi~~~~~l~~~~~~~~~---~~~~p~l~~~~~~~~~rp~~~~~~~~ 204 (210)
T TIGR01262 160 LADLCLVPQVYNAERFGVD---LTPYPTLRRIAAALAALPAFQRAHPE 204 (210)
T ss_pred HHHHHHHHHHHHHHHcCCC---cccchHHHHHHHHHhcCHHHHHhCcc
Confidence 9999999998877543322 36899999999999999999998865
No 12
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=9.6e-27 Score=222.60 Aligned_cols=189 Identities=25% Similarity=0.374 Sum_probs=162.0
Q ss_pred EEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc---CC
Q psy6388 6 TLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN---EQ 81 (480)
Q Consensus 6 tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~---~~ 81 (480)
+||+.+.||+++++++++.++|++|+. .++... +...++|+++||+|+||+|+++||.+|+||.||++||++ ..
T Consensus 2 ~L~~~~~sp~~~kv~l~l~e~g~~ye~~~v~~~~--~~~~~~~~~~nP~gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~ 79 (211)
T COG0625 2 KLYGSPTSPYSRKVRLALEEKGLPYEIVLVDLDA--EQKPPDFLALNPLGKVPALVDDDGEVLTESGAILEYLAERYPGP 79 (211)
T ss_pred eeecCCCCcchHHHHHHHHHcCCCceEEEeCccc--ccCCHHHHhcCCCCCCCEEeeCCCCeeecHHHHHHHHHhhCCCC
Confidence 899999999999999999999999998 555533 567899999999999999998777689999999999999 23
Q ss_pred -CCCCCHH---HHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCC-ChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCC
Q psy6388 82 -LKGKTEA---EKSKIFDYVCFAQDELLPNACRWVFPILEIYPY-NKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYIT 156 (480)
Q Consensus 82 -Llg~t~~---e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~-nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lT 156 (480)
|+|.++. +++++.+|+.++.+++.+.......+..+.... +....+.+.+.+...++.+|.+|..++||+|+++|
T Consensus 80 ~l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t 159 (211)
T COG0625 80 PLLPADPLARRARALLLWWLFFAASDLHPVIGQRRRALLGSEPELLEAALEAARAEIRALLALLEALLADGPYLAGDRFT 159 (211)
T ss_pred CcCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCC
Confidence 9998884 899999999999999988887766655222223 46778889999999999999999999999999999
Q ss_pred hhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcChhHH
Q psy6388 157 LADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFK 199 (480)
Q Consensus 157 lADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k 199 (480)
+|||++++.+.++.....+ ...+|+|.+|++++..+|.++
T Consensus 160 iAD~~~~~~~~~~~~~~~~---~~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 160 IADIALAPLLWRLALLGEE---LADYPALKAWYERVLARPAFR 199 (211)
T ss_pred HHHHHHHHHHHHhhhcCcc---cccChHHHHHHHHHHcCCchh
Confidence 9999999999885433222 268999999999999999976
No 13
>PRK11752 putative S-transferase; Provisional
Probab=99.95 E-value=1.5e-26 Score=229.46 Aligned_cols=197 Identities=22% Similarity=0.228 Sum_probs=152.5
Q ss_pred ceEEEEcCCCchHHHHHHHHHhc------CCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCC---ceeeCHHHH
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYS------SFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDG---TILTSSSAI 73 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~------Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG---~~L~ES~AI 73 (480)
.++||+.+ ||++++|+++++++ |++|+. .+++..+ ++.+++|+++||+|+||+|++++| .+|+||.||
T Consensus 44 ~~~Ly~~~-s~~~~rV~i~L~e~~~~~~~gl~ye~~~v~~~~~-~~~~~e~~~iNP~GkVP~Lv~~dg~~~~~L~ES~AI 121 (264)
T PRK11752 44 PLQLYSLG-TPNGQKVTIMLEELLALGVKGAEYDAWLIRIGEG-DQFSSGFVEINPNSKIPALLDRSGNPPIRVFESGAI 121 (264)
T ss_pred CeEEecCC-CCchHHHHHHHHHHHhccCCCCceEEEEecCccc-cccCHHHHhhCCCCCCCEEEeCCCCCCeEEEcHHHH
Confidence 47999975 89999999999997 889987 4554333 356889999999999999998654 689999999
Q ss_pred HHHHhc--CCCCCCCHHHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCC-hHhHHHHHHHHHHHHHHHHHHccCCCcc
Q psy6388 74 TYFVAN--EQLKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYN-KQTVDSAKDGLKRNLAKLDKHLLTRTYL 150 (480)
Q Consensus 74 a~YL~~--~~Llg~t~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~n-k~~~~~a~~~l~~~L~~Le~~L~~~tFL 150 (480)
++||++ ..|+|.++.+++++++|+.|+.+.+ +.....+....+..+.. ....+.....+.+.|+.||++|.+++||
T Consensus 122 l~YL~~~~~~L~P~~~~era~v~~wl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~le~~L~~~~fl 200 (264)
T PRK11752 122 LLYLAEKFGAFLPKDLAARTETLNWLFWQQGSA-PFLGGGFGHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQLAEHEYI 200 (264)
T ss_pred HHHHHHhcCCcCCCCHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 999998 4699999999999999999986643 21211111112212222 3345667778899999999999999999
Q ss_pred cCCCCChhhhhHHhhhHHHHHhh-CC-cc--ccCCCccHHHHHHHHhcChhHHHHhh
Q psy6388 151 VGDYITLADICNACTLLQVYQHA-MD-LT--FRKPYVNVNRWFTTIVNQPEFKKIVG 203 (480)
Q Consensus 151 vGe~lTlADI~l~~~L~~~~~~~-l~-~~--~r~~~PnL~RW~~ti~n~P~~k~v~~ 203 (480)
+|+++|+|||++++.+.++.... +. .. ....||+|.+|+++|.++|.|++++.
T Consensus 201 ~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k~~~~ 257 (264)
T PRK11752 201 AGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVKRGRI 257 (264)
T ss_pred CCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHHHHHh
Confidence 99999999999998876653211 11 11 14689999999999999999999764
No 14
>KOG0406|consensus
Probab=99.92 E-value=3.3e-24 Score=204.89 Aligned_cols=193 Identities=15% Similarity=0.191 Sum_probs=161.6
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhC-CCCcccEEEECCCceeeCHHHHHHHHhc--
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKF-SSPKVPAFESSDGTILTSSSAITYFVAN-- 79 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~n-P~gkVPvL~~~dG~~L~ES~AIa~YL~~-- 79 (480)
..+||++-.||+++|++++++++||+|+. ..+. +++++.++++| +.+|||||+. +|.+|+||..|++||++
T Consensus 9 ~vrL~~~w~sPfa~R~~iaL~~KgI~yE~veedl----~~Ks~~ll~~np~hkKVPvL~H-n~k~i~ESliiveYiDe~w 83 (231)
T KOG0406|consen 9 TVKLLGMWFSPFAQRVRIALKLKGIPYEYVEEDL----TNKSEWLLEKNPVHKKVPVLEH-NGKPICESLIIVEYIDETW 83 (231)
T ss_pred eEEEEEeecChHHHHHHHHHHhcCCceEEEecCC----CCCCHHHHHhccccccCCEEEE-CCceehhhHHHHHHHHhhc
Confidence 37999999999999999999999999998 4444 35899999999 6899999995 77789999999999998
Q ss_pred ---CCCCCCCHHHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHcc-CCCcccCCCC
Q psy6388 80 ---EQLKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLL-TRTYLVGDYI 155 (480)
Q Consensus 80 ---~~Llg~t~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~-~~tFLvGe~l 155 (480)
.+++|++|++||+.+.|+++++..+......... ....+..+.+.+++.+.|..||+.|. +.+|+.|+++
T Consensus 84 ~~~~~iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~~------~~~~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~ 157 (231)
T KOG0406|consen 84 PSGPPILPSDPYERAQARFWAEYIDKKVFFVGRFVVA------AKGGEEQEAAKEELREALKVLEEELGKGKDFFGGETI 157 (231)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHhHHHHHHHHHHh------hcCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCc
Confidence 5799999999999999999999766544433221 12336677888999999999999999 8899999999
Q ss_pred ChhhhhHHhhhHHHHHhhCC-----ccccCCCccHHHHHHHHhcChhHHHHhhhhhh
Q psy6388 156 TLADICNACTLLQVYQHAMD-----LTFRKPYVNVNRWFTTIVNQPEFKKIVGEVKL 207 (480)
Q Consensus 156 TlADI~l~~~L~~~~~~~l~-----~~~r~~~PnL~RW~~ti~n~P~~k~v~~~~~~ 207 (480)
++.||++++.+.+....... -.....+|.|.+|.++|.++|.++.++.+.+.
T Consensus 158 G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~~V~~~~p~~e~ 214 (231)
T KOG0406|consen 158 GFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDEAVKAVLPDSEK 214 (231)
T ss_pred CHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcChhHHhhcCCHHH
Confidence 99999999887777643211 11246899999999999999999999987543
No 15
>KOG0868|consensus
Probab=99.92 E-value=7.5e-25 Score=197.81 Aligned_cols=198 Identities=21% Similarity=0.296 Sum_probs=170.6
Q ss_pred CCceEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc-
Q psy6388 2 AKSGTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN- 79 (480)
Q Consensus 2 Ms~~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~- 79 (480)
+....||++-.|..++|||++++++||+|+. +++...+....+.+|...||.++||+|++ ||.+|+||.||.+||++
T Consensus 3 ~~KpiLYSYWrSSCswRVRiALaLK~iDYey~PvnLlk~~~q~~~ef~~iNPm~kVP~L~i-~g~tl~eS~AII~YLeEt 81 (217)
T KOG0868|consen 3 AAKPILYSYWRSSCSWRVRIALALKGIDYEYKPVNLLKEEDQSDSEFKEINPMEKVPTLVI-DGLTLTESLAIIEYLEET 81 (217)
T ss_pred cccchhhhhhcccchHHHHHHHHHcCCCcceeehhhhcchhhhhhHHhhcCchhhCCeEEE-CCEEeehHHHHHHHHHhc
Confidence 4468999988889999999999999999998 77776665566789999999999999997 88999999999999998
Q ss_pred ---CCCCCCCHHHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccC--CCcccCCC
Q psy6388 80 ---EQLKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLT--RTYLVGDY 154 (480)
Q Consensus 80 ---~~Llg~t~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~--~tFLvGe~ 154 (480)
..|+|.++..||.+++....+.+.+.|.-...++-.++.....-. ...+..-+.+.+..||+.|.. +.|.||+.
T Consensus 82 ~P~ppLLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ek~~~~~-~~W~q~~ItkGF~ALEklL~~~aGkycvGDe 160 (217)
T KOG0868|consen 82 YPDPPLLPKDPHKRAKARAISLLIASGIQPLQNLSVLKMLNEKEPGYG-DQWAQHFITKGFTALEKLLKSHAGKYCVGDE 160 (217)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHhcccccchh-hHHHHHHHHHhHHHHHHHHHHccCCcccCce
Confidence 589999999999999999999999988777667766664322222 567778888999999999975 57999999
Q ss_pred CChhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcChhHHHHhhh
Q psy6388 155 ITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGE 204 (480)
Q Consensus 155 lTlADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~ 204 (480)
+|+||+++.+.++.+.+...+ ...||-|.|..+++...|.|+....+
T Consensus 161 vtiADl~L~pqv~nA~rf~vd---l~PYPti~ri~e~l~elpaFq~ahP~ 207 (217)
T KOG0868|consen 161 VTIADLCLPPQVYNANRFHVD---LTPYPTITRINEELAELPAFQAAHPD 207 (217)
T ss_pred eehhhhccchhhhhhhhcccc---CCcCchHHHHHHHHHhCHHHHhcCCC
Confidence 999999999999988665555 46999999999999999999987654
No 16
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.91 E-value=1.9e-23 Score=199.33 Aligned_cols=187 Identities=19% Similarity=0.265 Sum_probs=138.3
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhh--------hhCCCCcccEEEECCCceeeCHHH
Q psy6388 1 MAKSGTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFV--------SKFSSPKVPAFESSDGTILTSSSA 72 (480)
Q Consensus 1 MMs~~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl--------~~nP~gkVPvL~~~dG~~L~ES~A 72 (480)
|..+++||+++.++++++|+++++++|++|+. +.+ + +.. ++|+ ..||.|+||+|++ ||.+|+||.|
T Consensus 1 m~~~~~L~y~~~~~~~~~vrl~L~~~gi~ye~-~~~--~-~~~-~~~~~~~~~~~~~~nP~g~vP~L~~-~~~~l~eS~A 74 (205)
T PTZ00057 1 MAEEIVLYYFDARGKAELIRLIFAYLGIEYTD-KRF--G-ENG-DAFIEFKNFKKEKDTPFEQVPILEM-DNIIFAQSQA 74 (205)
T ss_pred CCCceEEEecCCCcchHHHHHHHHHcCCCeEE-Eec--c-ccc-hHHHHHHhccccCCCCCCCCCEEEE-CCEEEecHHH
Confidence 44468999999999999999999999999998 333 1 122 2443 4799999999997 7789999999
Q ss_pred HHHHHhc-CCCCCCCHHHHHHHHHHHHHHh-hhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccCC--C
Q psy6388 73 ITYFVAN-EQLKGKTEAEKSKIFDYVCFAQ-DELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTR--T 148 (480)
Q Consensus 73 Ia~YL~~-~~Llg~t~~e~A~V~qwl~f~~-~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~--t 148 (480)
|++||++ .++.|.+..+++ ..|+.+.. .++...+... ..+.....+...+.+.+.+..||++|.++ +
T Consensus 75 I~~YLa~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~ 145 (205)
T PTZ00057 75 IVRYLSKKYKICGESELNEF--YADMIFCGVQDIHYKFNNT-------NLFKQNETTFLNEELPKWSGYFENILKKNHCN 145 (205)
T ss_pred HHHHHHHHcCCCCCCHHHHH--HHHHHHHHHHHHHHHHhhh-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999 467776654444 44544433 2332211110 00112233456688999999999999754 7
Q ss_pred cccCCCCChhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcChhHHHHhhh
Q psy6388 149 YLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGE 204 (480)
Q Consensus 149 FLvGe~lTlADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~ 204 (480)
||+|+++|+||+++++.+.+.... . +.....||+|.+|+++|.++|.+++++.+
T Consensus 146 ~l~Gd~~T~AD~~l~~~~~~~~~~-~-~~~l~~~P~l~~~~~r~~~~P~~k~y~~~ 199 (205)
T PTZ00057 146 YFVGDNLTYADLAVFNLYDDIETK-Y-PNSLKNFPLLKAHNEFISNLPNIKNYISN 199 (205)
T ss_pred eeeCCcccHHHHHHHHHHHHHHHh-C-hhhhccChhHHHHHHHHHhChHHHHHHHh
Confidence 999999999999999987765321 2 22357899999999999999999999865
No 17
>PF00647 EF1G: Elongation factor 1 gamma, conserved domain; InterPro: IPR001662 Translation elongation factors are responsible for two main processes during protein synthesis on the ribosome [, , ]. EF1A (or EF-Tu) is responsible for the selection and binding of the cognate aminoacyl-tRNA to the A-site (acceptor site) of the ribosome. EF2 (or EF-G) is responsible for the translocation of the peptidyl-tRNA from the A-site to the P-site (peptidyl-tRNA site) of the ribosome, thereby freeing the A-site for the next aminoacyl-tRNA to bind. Elongation factors are responsible for achieving accuracy of translation and both EF1A and EF2 are remarkably conserved throughout evolution. Elongation factor EF1B (also known as EF-Ts or EF-1beta/gamma/delta) is a nucleotide exchange factor that is required to regenerate EF1A from its inactive form (EF1A-GDP) to its active form (EF1A-GTP). EF1A is then ready to interact with a new aminoacyl-tRNA to begin the cycle again. EF1B is more complex in eukaryotes than in bacteria, and can consist of three subunits: EF1B-alpha (or EF-1beta), EF1B-gamma (or EF-1gamma) and EF1B-beta (or EF-1delta) []. This entry represents a conserved domain usually found near the C terminus of EF1B-gamma chains, a peptide of 410-440 residues. The gamma chain appears to play a role in anchoring the EF1B complex to the beta and delta chains and to other cellular components. More information about these proteins can be found at Protein of the Month: Elongation Factors [].; GO: 0003746 translation elongation factor activity, 0006414 translational elongation, 0005853 eukaryotic translation elongation factor 1 complex; PDB: 1PBU_A.
Probab=99.89 E-value=2.3e-24 Score=182.03 Aligned_cols=65 Identities=57% Similarity=0.981 Sum_probs=48.6
Q ss_pred eeEEEeeccccccCCchhhhhhhhchhhhhHhhhHHhhhhhhceeEEEeccCCCCceeEEEEEeccc
Q psy6388 359 SGVWVWRGQELAFNPDELQKVFMSCNLITGMFQRLDKMRKQAFASVCLFGTDNDSTISGVWVWRGQE 425 (480)
Q Consensus 359 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~g~~qr~~~~~k~~~~~~~~~g~~~~~~i~g~~~~~g~~ 425 (480)
.|--+|+..=- -++||+++|||||||||||||||++|||+||+++|||+++++.|+|||||||||
T Consensus 43 eg~Slw~~~Yk--y~~El~~~fmt~Nli~Gf~QRle~~rK~aFg~~~v~G~~~~~~I~Gvwv~rG~e 107 (107)
T PF00647_consen 43 EGYSLWFCDYK--YNDELTMTFMTCNLIGGFFQRLEKLRKYAFGSMSVFGEDNNSDISGVWVFRGQE 107 (107)
T ss_dssp TT-EEEEE--S---GGG---STTHHHHHHHHHHHGGGTGGGEEE--EEES-STT-EEEEEEEESSSS
T ss_pred cccEEEEEecC--ChhhhccceeehhHHHHHHHHHHHHhhhheeEEEEEecCCCCceEEEEEEecCC
Confidence 34344444322 489999999999999999999999999999999999999999999999999997
No 18
>PRK10387 glutaredoxin 2; Provisional
Probab=99.89 E-value=7.3e-23 Score=195.05 Aligned_cols=182 Identities=11% Similarity=0.051 Sum_probs=132.9
Q ss_pred EEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc---CCC
Q psy6388 6 TLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN---EQL 82 (480)
Q Consensus 6 tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~---~~L 82 (480)
|||+++.||+|++++++++++|++|+. +....+. ... ....+|.|+||+|+.+||.+|+||.||++||++ ..+
T Consensus 2 ~Ly~~~~sp~~~kv~~~L~~~gi~y~~-~~~~~~~-~~~--~~~~~p~~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~~~ 77 (210)
T PRK10387 2 KLYIYDHCPFCVKARMIFGLKNIPVEL-IVLANDD-EAT--PIRMIGQKQVPILQKDDGSYMPESLDIVHYIDELDGKPL 77 (210)
T ss_pred EEEeCCCCchHHHHHHHHHHcCCCeEE-EEcCCCc-hhh--HHHhcCCcccceEEecCCeEecCHHHHHHHHHHhCCCcc
Confidence 899999999999999999999999998 3332221 222 257889999999965688999999999999998 234
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCCh---------------------HhHHHHHHHHHHHHHHHH
Q psy6388 83 KGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNK---------------------QTVDSAKDGLKRNLAKLD 141 (480)
Q Consensus 83 lg~t~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk---------------------~~~~~a~~~l~~~L~~Le 141 (480)
++ ..+++.+++|+++....+...+...+....-...... ...+...+.+.+.|+.||
T Consensus 78 l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le 155 (210)
T PRK10387 78 LT--GKRSPAIEEWLRKVFGYLNKLLYPRFAKADLPEFATPSARQYFIDKKEASIGDFDALLAHTPGLIKEINADLRALD 155 (210)
T ss_pred CC--CcccHHHHHHHHHHHHHhhcchhcccccCCCcccCCHHHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHHHHHHHH
Confidence 44 1368899999998865554332211110000000000 011356778999999999
Q ss_pred HHccCCCcccCCCCChhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcChhH
Q psy6388 142 KHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEF 198 (480)
Q Consensus 142 ~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~ 198 (480)
.+|.+ +||+|+++|+|||++++.+.++... .+ ...+|+|.+|+++|.++|.+
T Consensus 156 ~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~-~~---~~~~p~l~~w~~r~~~r~~~ 207 (210)
T PRK10387 156 PLIVK-PNAVNGELSTDDIHLFPILRNLTLV-KG---IEWPPRVADYRDNMSKKTQV 207 (210)
T ss_pred HHhcC-ccccCCCCCHHHHHHHHHHhcceee-cC---CCCCHHHHHHHHHHHHHhCC
Confidence 99987 9999999999999999998887432 11 12469999999999999875
No 19
>PLN02378 glutathione S-transferase DHAR1
Probab=99.89 E-value=1.2e-22 Score=195.10 Aligned_cols=179 Identities=20% Similarity=0.247 Sum_probs=135.8
Q ss_pred CCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc--C--CCCCC
Q psy6388 11 PDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN--E--QLKGK 85 (480)
Q Consensus 11 ~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~--~--~Llg~ 85 (480)
..||++++|+++++++|++++. .+++. +++++|+++||.|+||+|++ +|.+|+||.||++||++ . .| .
T Consensus 18 ~~~p~~~rv~~~L~e~gl~~e~~~v~~~----~~~~~~l~inP~G~VPvL~~-~~~~l~ES~aI~~YL~~~~~~~~l--~ 90 (213)
T PLN02378 18 GDCPFSQRALLTLEEKSLTYKIHLINLS----DKPQWFLDISPQGKVPVLKI-DDKWVTDSDVIVGILEEKYPDPPL--K 90 (213)
T ss_pred CCCcchHHHHHHHHHcCCCCeEEEeCcc----cCCHHHHHhCCCCCCCEEEE-CCEEecCHHHHHHHHHHhCCCCCC--C
Confidence 4699999999999999999998 55542 46789999999999999996 66789999999999998 2 23 4
Q ss_pred CHHHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHcc--CCCcccCCCCChhhhhHH
Q psy6388 86 TEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLL--TRTYLVGDYITLADICNA 163 (480)
Q Consensus 86 t~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~--~~tFLvGe~lTlADI~l~ 163 (480)
++.+++.+++++.. .+..+..+ . ...+.+...+.+.|..||++|. +++||+|+++|+|||+++
T Consensus 91 ~~~~~a~i~~~~~~-------~~~~~~~~---~-----~~~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~ 155 (213)
T PLN02378 91 TPAEFASVGSNIFG-------TFGTFLKS---K-----DSNDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLA 155 (213)
T ss_pred CHHHHHHHHHHHHH-------HHHHHHhc---C-----ChhhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHH
Confidence 67888887765431 11111111 0 1123445677888999999998 478999999999999999
Q ss_pred hhhHHHHH---hhCCccccCCCccHHHHHHHHhcChhHHHHhhhhhhhhhh
Q psy6388 164 CTLLQVYQ---HAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGEVKLCEKQ 211 (480)
Q Consensus 164 ~~L~~~~~---~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~~~~~ek~ 211 (480)
+.+.++.. ..........||+|.+|+++|.++|.++.+++...++-..
T Consensus 156 ~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~rpa~~~~~~~~~~~~~~ 206 (213)
T PLN02378 156 PKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKTKTEEKYVISG 206 (213)
T ss_pred HHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhcCCCeecccCChHHHHHH
Confidence 99876532 1111122468999999999999999999998877666543
No 20
>KOG1695|consensus
Probab=99.88 E-value=1e-21 Score=186.39 Aligned_cols=195 Identities=21% Similarity=0.176 Sum_probs=152.5
Q ss_pred CCceEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc-C
Q psy6388 2 AKSGTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN-E 80 (480)
Q Consensus 2 Ms~~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~-~ 80 (480)
|..+||++++..+++..+|++++++|++|+. ..+..+. .-+......|+|++|+|.. ||..|.+|.||+|||++ -
T Consensus 1 m~~ykL~Yf~~RG~ae~iR~lf~~a~v~fEd-~r~~~~~--~w~~~K~~~pfgqlP~l~v-Dg~~i~QS~AI~RyLArk~ 76 (206)
T KOG1695|consen 1 MPPYKLTYFNIRGLAEPIRLLFAYAGVSFED-KRITMED--AWEELKDKMPFGQLPVLEV-DGKKLVQSRAILRYLARKF 76 (206)
T ss_pred CCceEEEecCcchhHHHHHHHHHhcCCCcce-eeecccc--chhhhcccCCCCCCCEEeE-CCEeeccHHHHHHHHHHHh
Confidence 5589999999999999999999999999998 3332221 1233344579999999997 79999999999999999 6
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhhhhHHHHhhh-hhcccCCCChHhHH-HHHHHHHHHHHHHHHHcc--CCCcccCCCCC
Q psy6388 81 QLKGKTEAEKSKIFDYVCFAQDELLPNACRWVF-PILEIYPYNKQTVD-SAKDGLKRNLAKLDKHLL--TRTYLVGDYIT 156 (480)
Q Consensus 81 ~Llg~t~~e~A~V~qwl~f~~~~l~~~~~~~~~-p~~g~~~~nk~~~~-~a~~~l~~~L~~Le~~L~--~~tFLvGe~lT 156 (480)
+|.|+|+.|+|+|+...+-...-........+. +..|. .....+ .......+.+..++..|. ++.||||+++|
T Consensus 77 gl~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~~~~~~~g~---~~~~~~~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT 153 (206)
T KOG1695|consen 77 GLAGKTEEEEAWVDMIVDQFKDFRWEIFRQPYTAPEAGK---SEEELDKLYLPAKPKYFKILEKILKKNKSGFLVGDKLT 153 (206)
T ss_pred CcCCCCHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhcc---chhhhhhhhccchHHHHHHHHHHHHhCCCCeeecCccc
Confidence 999999999999999887554333222222222 22222 111122 566677888999999998 45799999999
Q ss_pred hhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcChhHHHHhhh
Q psy6388 157 LADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGE 204 (480)
Q Consensus 157 lADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~ 204 (480)
.||++++..+..+... +++.....+|+|.++..+|.++|.+++++..
T Consensus 154 ~aDl~i~e~l~~l~~~-~~~~~~~~~P~L~a~~~kv~~~p~ik~~i~~ 200 (206)
T KOG1695|consen 154 WADLVIAEHLDTLEEL-LDPSALDHFPKLKAFKERVSSIPNIKKYLES 200 (206)
T ss_pred HHHHHHHHHHHHHHHh-cCchhhccChHHHHHHHHHhcCchHHHHHhc
Confidence 9999999999987554 6676678899999999999999999999875
No 21
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.87 E-value=4.6e-21 Score=190.15 Aligned_cols=172 Identities=18% Similarity=0.201 Sum_probs=131.2
Q ss_pred CCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc--C--CCCCCC
Q psy6388 12 DNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN--E--QLKGKT 86 (480)
Q Consensus 12 ~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~--~--~Llg~t 86 (480)
.||++++++++++++|++|++ .++. .+++++|+++||.|+||+|++ +|..|+||.||++||++ . .| .+
T Consensus 72 ~cp~s~rV~i~L~ekgi~ye~~~vdl----~~~~~~fl~iNP~GkVPvL~~-d~~~L~ES~aI~~YL~e~~p~~~L--~~ 144 (265)
T PLN02817 72 DCPFCQRVLLTLEEKHLPYDMKLVDL----TNKPEWFLKISPEGKVPVVKL-DEKWVADSDVITQALEEKYPDPPL--AT 144 (265)
T ss_pred CCcHHHHHHHHHHHcCCCCEEEEeCc----CcCCHHHHhhCCCCCCCEEEE-CCEEEecHHHHHHHHHHHCCCCCC--CC
Confidence 489999999999999999998 4444 246789999999999999997 55689999999999998 2 34 46
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccC-CCcccCCCCChhhhhHHhh
Q psy6388 87 EAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLT-RTYLVGDYITLADICNACT 165 (480)
Q Consensus 87 ~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~-~tFLvGe~lTlADI~l~~~ 165 (480)
+.+++++.+|+... +..++. . .+. .+...+.+.+.+..||++|.+ +.||+|+++|+|||++++.
T Consensus 145 ~~era~i~~~l~~~-------~~~~~~---~---~~~--~~~~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~ 209 (265)
T PLN02817 145 PPEKASVGSKIFST-------FIGFLK---S---KDP--GDGTEQALLDELTSFDDYIKENGPFINGEKISAADLSLGPK 209 (265)
T ss_pred HHHHHHHHHHHHHH-------HHHHhc---c---CCc--chHHHHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHH
Confidence 88999998876321 111111 1 111 122345677889999999974 6999999999999999999
Q ss_pred hHHHHHh---hCCccccCCCccHHHHHHHHhcChhHHHHhhhh
Q psy6388 166 LLQVYQH---AMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGEV 205 (480)
Q Consensus 166 L~~~~~~---~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~~ 205 (480)
+.++... ..+-.....||+|.+|+++|.++|+|+.+....
T Consensus 210 L~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~rps~~~~~~~~ 252 (265)
T PLN02817 210 LYHLEIALGHYKNWSVPDSLPFVKSYMKNIFSMESFVKTRALP 252 (265)
T ss_pred HHHHHHHHHHhcCCCccccCHHHHHHHHHHhcchhHhhcCCCH
Confidence 8765321 111112468999999999999999999987653
No 22
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.87 E-value=1e-20 Score=184.22 Aligned_cols=179 Identities=19% Similarity=0.235 Sum_probs=134.9
Q ss_pred CCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc---CC----C
Q psy6388 11 PDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN---EQ----L 82 (480)
Q Consensus 11 ~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~---~~----L 82 (480)
+.||+++++++++.++|++|+. .+++. +++++|+++||.|+||||++ +|.+|+||.||++||++ .+ +
T Consensus 17 ~~cp~~~rv~i~L~ekgi~~e~~~vd~~----~~~~~fl~inP~g~vPvL~~-~g~~l~ES~aI~eYL~e~~~~~~~p~l 91 (236)
T TIGR00862 17 GNCPFSQRLFMILWLKGVVFNVTTVDLK----RKPEDLQNLAPGTHPPFLTY-NTEVKTDVNKIEEFLEETLCPPRYPKL 91 (236)
T ss_pred CCCHhHHHHHHHHHHcCCCcEEEEECCC----CCCHHHHHHCcCCCCCEEEE-CCEEeecHHHHHHHHHHHcCCCCCCCC
Confidence 4789999999999999999998 55542 45799999999999999996 78899999999999997 22 4
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHcc-----------------
Q psy6388 83 KGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLL----------------- 145 (480)
Q Consensus 83 lg~t~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~----------------- 145 (480)
.+.++..++... ++.+.+..++ .+ ......+.+.+.+.+.|+.||++|.
T Consensus 92 ~p~~~~~~~~~~--------~l~~~~~~~~---~~---~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~ 157 (236)
T TIGR00862 92 SPKHPESNTAGL--------DIFAKFSAYI---KN---SNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKV 157 (236)
T ss_pred CCCCHHHHHHHH--------HHHHHHHHHH---Hc---CCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccc
Confidence 445555444321 2333332221 11 1233445566779999999999997
Q ss_pred -CCCcccCCCCChhhhhHHhhhHHHHHh---hCCccccCCCccHHHHHHHHhcChhHHHHhhhhhhh
Q psy6388 146 -TRTYLVGDYITLADICNACTLLQVYQH---AMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGEVKLC 208 (480)
Q Consensus 146 -~~tFLvGe~lTlADI~l~~~L~~~~~~---~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~~~~~ 208 (480)
+++|+.|+++|+|||++++.+.++... ..+-...+.||+|.+|++++.++|+|+..+..-.-+
T Consensus 158 ~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i~~~~p~l~~w~~~~~~~~sf~~t~p~~~~i 224 (236)
T TIGR00862 158 SRRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFDIPAEFTGVWRYLSNAYAREEFTNTCPDDKEI 224 (236)
T ss_pred cCCCcccCCccchhhHHHHHHHHHHHHHHHHHhCcCccccCchHHHHHHHHhccchHHhhCCChHHH
Confidence 578999999999999999999887532 223233578999999999999999999987654333
No 23
>PLN02907 glutamate-tRNA ligase
Probab=99.86 E-value=5e-21 Score=211.81 Aligned_cols=162 Identities=23% Similarity=0.322 Sum_probs=131.7
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc----
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN---- 79 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~---- 79 (480)
+++||+.+.+ .+.+++++|++.|++++.. . .+|.|+||+|+++||.+|+||.||++||++
T Consensus 2 ~~kLy~~~~S-~~~~v~~~L~~lgv~~e~~-~--------------~~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~ 65 (722)
T PLN02907 2 EAKLSFPPDS-PPLAVIAAAKVAGVPLTID-P--------------SLKSGSAPTLLFSSGEKLTGTNVLLRYIARSASL 65 (722)
T ss_pred eEEEEECCCC-ChHHHHHHHHHcCCCcEEe-e--------------cCCCCCCcEEEECCCCEEECHHHHHHHHHHhCCC
Confidence 3899998866 5778999999999999872 1 258999999998889999999999999998
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhh
Q psy6388 80 EQLKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLAD 159 (480)
Q Consensus 80 ~~Llg~t~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlAD 159 (480)
..|+|.++.+++++++|+.++..... ...+...|+.||.+|.+++||+|+++|+||
T Consensus 66 ~~L~p~d~~erAqV~qWL~~~~~~~~------------------------~~~l~~~L~~LE~~L~~rtYLvGd~lTLAD 121 (722)
T PLN02907 66 PGFYGQDAFESSQVDEWLDYAPTFSS------------------------GSEFENACEYVDGYLASRTFLVGYSLTIAD 121 (722)
T ss_pred cCCCCCCHHHHHHHHHHHHHHhhccc------------------------HHHHHHHHHHHHHHhccCCeecCCCCCHHH
Confidence 36899999999999999998754210 013567899999999999999999999999
Q ss_pred hhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcChh--HHHHhhhh
Q psy6388 160 ICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPE--FKKIVGEV 205 (480)
Q Consensus 160 I~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~--~k~v~~~~ 205 (480)
|++++.+......+........||||.||+++|.++|. |+.++...
T Consensus 122 IaL~~~L~~~~~~~~~~~~~~~yPnL~RW~erI~arPs~~~~~~~~a~ 169 (722)
T PLN02907 122 IAIWSGLAGSGQRWESLRKSKKYQNLVRWFNSISAEYSDILNEVTAAY 169 (722)
T ss_pred HHHHHHHHhhhhhhhcccccccCHHHHHHHHHHHhCCCcchhhHHHHH
Confidence 99999886652222222235789999999999999999 55555543
No 24
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.84 E-value=2.7e-20 Score=178.35 Aligned_cols=177 Identities=14% Similarity=0.137 Sum_probs=129.6
Q ss_pred EEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc---CCC
Q psy6388 6 TLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN---EQL 82 (480)
Q Consensus 6 tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~---~~L 82 (480)
|||++..||+|+++++++.++|++|+. +....+ +. ...++.||.|+||+|+.+||..|+||.+|++||++ ..+
T Consensus 1 ~Ly~~~~sp~~~kvr~~L~~~gl~~e~-~~~~~~-~~--~~~~~~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~~~~~ 76 (209)
T TIGR02182 1 KLYIYDHCPFCVRARMIFGLKNIPVEK-HVLLND-DE--ETPIRMIGAKQVPILQKDDGRAMPESLDIVAYFDKLDGEPL 76 (209)
T ss_pred CeecCCCCChHHHHHHHHHHcCCCeEE-EECCCC-cc--hhHHHhcCCCCcceEEeeCCeEeccHHHHHHHHHHhCCCcc
Confidence 689999999999999999999999997 333222 12 23478999999999985688899999999999998 234
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCC--------------h-----------HhHHHHHHHHHHHH
Q psy6388 83 KGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYN--------------K-----------QTVDSAKDGLKRNL 137 (480)
Q Consensus 83 lg~t~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~n--------------k-----------~~~~~a~~~l~~~L 137 (480)
++ +.+++++++|+.+....+...+ .|.+...... + ...+...+.+++.|
T Consensus 77 ~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l 150 (209)
T TIGR02182 77 LT--GKVSPEIEAWLRKVTGYANKLL----LPRFAKSDLPEFATQSARKYFTDKKEASAGNFSALLNHTPGLLEEINADL 150 (209)
T ss_pred CC--CCChHHHHHHHHHHHHHhhhhh----ccccccCCCcccCCHHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHH
Confidence 43 2256789999988766553322 2221110000 0 00145667899999
Q ss_pred HHHHHHccCCCcccCCCCChhhhhHHhhhHHHHHhhCCccccCCCc-cHHHHHHHHhcChhH
Q psy6388 138 AKLDKHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYV-NVNRWFTTIVNQPEF 198 (480)
Q Consensus 138 ~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~~l~~~~r~~~P-nL~RW~~ti~n~P~~ 198 (480)
+.||++|.+++||.| ++|+|||++++.+.++.... . ..+| +|.+|+++|.+++.+
T Consensus 151 ~~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~~-~----~~~p~~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 151 EELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLVA-G----INWPSRVADYLDNMSKKSKV 206 (209)
T ss_pred HHHHHHHhCccccCC-CCCHHHHHHHHHhcCeeeec-C----CCCChHHHHHHHHHHHHhCC
Confidence 999999999999965 69999999999988753211 1 1367 999999999988764
No 25
>KOG4420|consensus
Probab=99.76 E-value=4.9e-18 Score=161.88 Aligned_cols=197 Identities=16% Similarity=0.271 Sum_probs=146.7
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc---
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN--- 79 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~--- 79 (480)
.+.||.+|.|..+++||++++.+||+++. .|+...+ ++..++|..+||.|.||||+. +..+|.++.-|+.||.+
T Consensus 26 ~~vLyhhpysf~sQkVrlvi~EK~id~~~y~V~l~~g-eh~epwFmrlNp~gevPVl~~-g~~II~d~tqIIdYvErtf~ 103 (325)
T KOG4420|consen 26 SLVLYHHPYSFSSQKVRLVIAEKGIDCEEYDVSLPQG-EHKEPWFMRLNPGGEVPVLIH-GDNIISDYTQIIDYVERTFT 103 (325)
T ss_pred cceeeecCcccccceeeeehhhcccccceeeccCccc-cccCchheecCCCCCCceEec-CCeecccHHHHHHHHHHhhc
Confidence 36899999999999999999999999998 6777655 578999999999999999994 55689999999999988
Q ss_pred --CCCCC-CCHHHHHHHHHHHHHHhhhhhhHHHHh-----hh---------hhcc-------------------------
Q psy6388 80 --EQLKG-KTEAEKSKIFDYVCFAQDELLPNACRW-----VF---------PILE------------------------- 117 (480)
Q Consensus 80 --~~Llg-~t~~e~A~V~qwl~f~~~~l~~~~~~~-----~~---------p~~g------------------------- 117 (480)
..|.| .+..+..++.+.-..... .++..| ++ |..+
T Consensus 104 ger~l~pe~~S~~~d~~l~~e~~l~~---lpm~~~t~g~~lh~eL~~~s~iP~~~~iR~~~~k~~~~v~~l~~~e~pdla 180 (325)
T KOG4420|consen 104 GERVLMPEVGSLQHDRVLQYEELLDA---LPMDAYTHGCILHPELTTDSMIPKYAEIRRHLAKATTDVMKLDHEEEPDLA 180 (325)
T ss_pred ccccccccccccccHHHHHHHHHHHh---cCcchhhccccccchhhccccCcccHHHHHHHHHHHHHHHHHHhhcCchhh
Confidence 24555 122222222222111100 000000 00 1110
Q ss_pred --------------cCCCChHhHHHHHHHHHHHHHHHHHHccC----CCcccCCCCChhhhhHHhhhHHHHHhhCCcccc
Q psy6388 118 --------------IYPYNKQTVDSAKDGLKRNLAKLDKHLLT----RTYLVGDYITLADICNACTLLQVYQHAMDLTFR 179 (480)
Q Consensus 118 --------------~~~~nk~~~~~a~~~l~~~L~~Le~~L~~----~tFLvGe~lTlADI~l~~~L~~~~~~~l~~~~r 179 (480)
....+.....+....+...|+.+|+.|.. .+||+|+.+|+|||.+..+|+++....+...+.
T Consensus 181 ~ay~akqkkl~~kl~~hdd~s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e~~yw 260 (325)
T KOG4420|consen 181 EAYLAKQKKLMAKLLEHDDVSYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLEKKYW 260 (325)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccHHHhc
Confidence 00222334456777888889999999987 589999999999999999999998877776665
Q ss_pred C--CCccHHHHHHHHhcChhHHHHhhhh
Q psy6388 180 K--PYVNVNRWFTTIVNQPEFKKIVGEV 205 (480)
Q Consensus 180 ~--~~PnL~RW~~ti~n~P~~k~v~~~~ 205 (480)
. ..|||..||.++..+++|++++|+.
T Consensus 261 ~~gsrpnle~Yf~rvrrR~sf~kvlg~~ 288 (325)
T KOG4420|consen 261 EDGSRPNLESYFERVRRRFSFRKVLGDI 288 (325)
T ss_pred ccCCCccHHHHHHHHHhhhHHHHhhhhH
Confidence 4 7899999999999999999999985
No 26
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.64 E-value=8.9e-16 Score=133.71 Aligned_cols=123 Identities=50% Similarity=0.870 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHH
Q psy6388 89 EKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQ 168 (480)
Q Consensus 89 e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~ 168 (480)
+++++++|+.+..+.+.+++...+.+..+..+.+....+...+.+.+.|+.||++|..++||+|+++|+|||++++.+.+
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~ 80 (123)
T cd03181 1 EEAQVLQWVSFANTELLPAVAAWFLPLLGIAPYNKKSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLL 80 (123)
T ss_pred ChHHHHHHHHHHHhhhHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHH
Confidence 47899999999999999988877777666556677788889999999999999999999999999999999999999988
Q ss_pred HHHhhCCccccCCCccHHHHHHHHhcChhHHHHhhhhhhhhhh
Q psy6388 169 VYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGEVKLCEKQ 211 (480)
Q Consensus 169 ~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~~~~~ek~ 211 (480)
+....++......+|+|.+|++++.++|.|++++.+.++|+++
T Consensus 81 ~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~~~~~ 123 (123)
T cd03181 81 GFTYVFDKEWRAKYPNVTRWFNTVVNQPIFKAVFGEVKLCEKP 123 (123)
T ss_pred HHHHHcCHHHHHhChHHHHHHHHHHcCHHHHHHcCCCCcCCCC
Confidence 7655555444578999999999999999999999999999864
No 27
>KOG1627|consensus
Probab=99.57 E-value=8.3e-16 Score=135.03 Aligned_cols=101 Identities=33% Similarity=0.348 Sum_probs=82.3
Q ss_pred cCCCCCCCCCCCCCCCCCCccc----ccccccccC-cccchhhhhhhcCCCCceEEEEEeeCCccceeeeeechhhhHHh
Q psy6388 259 AAEPKSKDPFDLLPKGTFNMED----FKRFYSNND-EAKSIPYFWEKFDKENYSIWFGEYKYPEELQKVFMSCNLITGMF 333 (480)
Q Consensus 259 ~~~pK~k~p~~~~~~~~~~~d~----~k~~y~n~~-~~~~~~~~~~~~~~~~~s~w~~~yky~~e~~~~fm~~nli~g~~ 333 (480)
+..||....||.++|.++|.|+ .+.+|.+.| +.+|+|...|+|++|+-- .+.-+ +++.=|- +-|
T Consensus 4 ~~lp~~~Fvldd~kr~ySn~dt~~~a~P~f~e~~d~e~ys~w~~~Yky~eeL~~----~fms~--nli~g~~-qrl---- 72 (160)
T KOG1627|consen 4 DLLPKSTFVLDDWKRKYSNEDTREVALPWFWEHFDPEGYSLWKVDYKYNEELTL----TFMSC--NLIGGFF-QRL---- 72 (160)
T ss_pred hhCCCCccchhhhhhhhcccccccccchHHHHHhCcccceeeeccccCchHHHH----HHHHh--hhhhHHH-HHH----
Confidence 4568899999999999999998 579999999 499999999999999762 22111 1121122 345
Q ss_pred hhHHHHhhhhcceeeeeccCCCCceeeEEEeeccccccCC
Q psy6388 334 QRLDKMRKQTFASVCLFGTDNDSTISGVWVWRGQELAFNP 373 (480)
Q Consensus 334 qr~~~~~k~~f~~~~~~g~~~~~~i~~~~~~~~~~~~~~~ 373 (480)
|++|||+||+|+|+|++++++|+|+|+||||+|+|..
T Consensus 73 ---~~~rk~~f~~~~~~g~~~~~~i~g~~~~rg~ela~~~ 109 (160)
T KOG1627|consen 73 ---DKSRKYAFGSMVLFGENGNSTISGAWVFRGQELAPAF 109 (160)
T ss_pred ---HHHHHhhheeEEEeccCCCCcceEEEEEecccccccc
Confidence 6789999999999999999999999999999999854
No 28
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.53 E-value=4.8e-14 Score=122.50 Aligned_cols=112 Identities=21% Similarity=0.325 Sum_probs=92.1
Q ss_pred CHHHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhh
Q psy6388 86 TEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACT 165 (480)
Q Consensus 86 t~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~ 165 (480)
++.++++|+||+++.+.++.+.+..+.++.. .+++..+.+.+.+.+.+..||++|.+++||+|+++|+|||++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~ 78 (115)
T cd03196 3 DPAALKEMLALIAENDNEFKHHLDRYKYADR----YPEESEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPF 78 (115)
T ss_pred chHHHHHHHHHHHHcchhhHHHHHhccchhh----cCcccHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHH
Confidence 6889999999999999999988887776542 222357788999999999999999999999999999999999988
Q ss_pred hHHHHHhhCCccccCCCccHHHHHHHHhcChhHHHH
Q psy6388 166 LLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKI 201 (480)
Q Consensus 166 L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v 201 (480)
+.++............||+|.+|+++|.++|.|+++
T Consensus 79 l~~~~~~~~~~~~~~~~P~L~~w~~r~~~rpa~~~~ 114 (115)
T cd03196 79 VRQFAHVDPKWFDQSPYPRLRRWLNGFLASPLFSKI 114 (115)
T ss_pred HHHHHHhhhcccCcccCHHHHHHHHHHHcChHHHhh
Confidence 766532211111247899999999999999999875
No 29
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.52 E-value=1e-13 Score=119.58 Aligned_cols=111 Identities=19% Similarity=0.147 Sum_probs=92.5
Q ss_pred CHHHHHHHHHHHHHHhhhhhhHHHHhhhhhcccC------CCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhh
Q psy6388 86 TEAEKSKIFDYVCFAQDELLPNACRWVFPILEIY------PYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLAD 159 (480)
Q Consensus 86 t~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~------~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlAD 159 (480)
++.+++++++|+.|+++.+.+++...+.+..+.. .......+.....+.+.|..||++|++++|++|+++|+||
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aD 80 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIAD 80 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHH
Confidence 4679999999999999999888877766544322 3456777889999999999999999999999999999999
Q ss_pred hhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcChhH
Q psy6388 160 ICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEF 198 (480)
Q Consensus 160 I~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~ 198 (480)
|++++.+.++..... .++..+|+|.+|++++.++|++
T Consensus 81 i~l~~~~~~~~~~~~--~~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 81 ITAFVGLDFAKVVKL--RVPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHhHHHHhcCC--CCccccHHHHHHHHHHHhccCC
Confidence 999999987654333 2356899999999999999963
No 30
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.50 E-value=6.6e-14 Score=120.06 Aligned_cols=112 Identities=22% Similarity=0.265 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHH
Q psy6388 89 EKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQ 168 (480)
Q Consensus 89 e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~ 168 (480)
+++++++|+.|.++.+.+++..++.......+.++...+.....+.+.++.||++|++++|++|+++|+|||++++.+.+
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~ 80 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRYAPEKIPYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRR 80 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHH
Confidence 47899999999999999887665443221223456677888899999999999999999999999999999999998888
Q ss_pred HHHhhCCccccCCCccHHHHHHHHhcChhHHHHh
Q psy6388 169 VYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIV 202 (480)
Q Consensus 169 ~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~ 202 (480)
......+ ....||+|.+|+++|.++|.+++++
T Consensus 81 ~~~~~~~--~~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 81 LEWIGID--DLDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred HHhcccc--chhhchHHHHHHHHHhhCHHHHHhc
Confidence 7543222 3578999999999999999999865
No 31
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.50 E-value=9.4e-14 Score=118.87 Aligned_cols=111 Identities=20% Similarity=0.327 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHhhhhhcccCC--CChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhh
Q psy6388 89 EKSKIFDYVCFAQDELLPNACRWVFPILEIYP--YNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTL 166 (480)
Q Consensus 89 e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~--~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L 166 (480)
+++++++|+.|..+.+.+....++.+.....+ ..+...+...+.+.+.+..||++|.+++||+|+++|+|||++++.+
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~ 81 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWATDEAAQEEVKAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVL 81 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhcccccccccChhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHH
Confidence 58999999999999999887766554332111 1245567788899999999999999999999999999999999998
Q ss_pred HHHHHhhCCccccCCCccHHHHHHHHhcChhHHHHh
Q psy6388 167 LQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIV 202 (480)
Q Consensus 167 ~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~ 202 (480)
.++.....+ ...+|+|.+|+++|.++|.+++++
T Consensus 82 ~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 82 RWAPGVGLD---LSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHhhcCCC---hhhChHHHHHHHHHHhCHHhHhhC
Confidence 876433222 357999999999999999999863
No 32
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.49 E-value=9e-14 Score=111.36 Aligned_cols=73 Identities=51% Similarity=0.802 Sum_probs=64.4
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~ 79 (480)
++||+++.|+++++++++++++|++++. .++. ..+++.++|+++||.|+||+|+.+||.+|+||.||++||++
T Consensus 1 ~~Ly~~~~~~~~~~~~~~l~~~gi~~~~~~v~~--~~~~~~~~~~~~nP~~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 1 GTLYTYPGNPRSLKILAAAKYNGLDVEIVDFQP--GKENKTPEFLKKFPLGKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred CeEecCCCCccHHHHHHHHHHcCCceEEEeccc--ccccCCHHHHHhCCCCCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 4899999999999999999999999998 4443 22367899999999999999997778899999999999975
No 33
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.48 E-value=2.8e-13 Score=117.32 Aligned_cols=110 Identities=23% Similarity=0.316 Sum_probs=88.2
Q ss_pred CCCHHHHHHHHHHHHHHhhhhhhHHHHhh-hhhcccC-------CCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCC
Q psy6388 84 GKTEAEKSKIFDYVCFAQDELLPNACRWV-FPILEIY-------PYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYI 155 (480)
Q Consensus 84 g~t~~e~A~V~qwl~f~~~~l~~~~~~~~-~p~~g~~-------~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~l 155 (480)
|.++.+++++++|++|..+.+.+.+...+ .+..+.. +.++...+.+...+.+.|+.||++|.+++||+|+++
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~ 81 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLAKKGYFVGDKL 81 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHccCCCCCCCCC
Confidence 46789999999999999999988876433 3333321 133555667778999999999999999999999999
Q ss_pred ChhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcCh
Q psy6388 156 TLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQP 196 (480)
Q Consensus 156 TlADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P 196 (480)
|+|||++++.+.++..... .+..+|+|.+|+++|.++|
T Consensus 82 t~ADi~l~~~~~~~~~~~~---~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 82 TAADIMMSFPLEAALARGP---LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred CHHHHHHHHHHHHHHHcCc---ccccCchHHHHHHHHhcCC
Confidence 9999999988887754322 3678999999999999986
No 34
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.48 E-value=2.6e-13 Score=116.98 Aligned_cols=112 Identities=24% Similarity=0.424 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHhhh-----hhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHH
Q psy6388 89 EKSKIFDYVCFAQDELLPNACRWVF-----PILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNA 163 (480)
Q Consensus 89 e~A~V~qwl~f~~~~l~~~~~~~~~-----p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~ 163 (480)
+|+++++|+.+..+.+.+.+..+++ |..+ .+.+....+.+...+.+.++.||++|++++|++|+++|+|||+++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~ 80 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLG-LPTDEAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHL 80 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHH
Confidence 6899999999999888877655322 3222 255677778888999999999999999999999999999999999
Q ss_pred hhhHHHHHhhCCccccCCCccHHHHHHHHhcChhHHHHh
Q psy6388 164 CTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIV 202 (480)
Q Consensus 164 ~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~ 202 (480)
+.+.++... .....+..+|+|.+|+++|.++|.+++++
T Consensus 81 ~~~~~~~~~-~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 81 PYLQYLMAT-PFAKLFDSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred HHHHHHHHc-cchhhhhcCchHHHHHHHHHhCHHHHhhC
Confidence 998877432 12223568999999999999999998753
No 35
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.45 E-value=3.1e-13 Score=107.38 Aligned_cols=73 Identities=21% Similarity=0.358 Sum_probs=63.4
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~ 79 (480)
++||+++.||++++++++++++|++++. .++...+ +...++|++.||.|+||+|++ +|..|+||.||++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~i~~~~~-~~~~~~~~~~~p~~~vP~l~~-~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 1 IDLYYLPGSPPCRAVLLTAKALGLELNLKEVNLMKG-EHLKPEFLKLNPQHTVPTLVD-NGFVLWESHAILIYLVE 74 (74)
T ss_pred CEEEeCCCCCcHHHHHHHHHHcCCCCEEEEecCccC-CcCCHHHHhhCcCCCCCEEEE-CCEEEEcHHHHHHHHhC
Confidence 3899999999999999999999999998 4444323 356799999999999999996 67899999999999975
No 36
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.45 E-value=6.6e-13 Score=116.05 Aligned_cols=111 Identities=16% Similarity=0.193 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhH
Q psy6388 88 AEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLL 167 (480)
Q Consensus 88 ~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~ 167 (480)
.+++++++|+.++++.+.+++...+.+. +...+.....+.+.++.||++|..++||+|+++|+|||++++.+.
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~ 74 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKVLAAK-------GEEREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLG 74 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHccc-------hHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHH
Confidence 5799999999999999888776554321 445567888999999999999999999999999999999999988
Q ss_pred HHHHh--hCCcc--ccCCCccHHHHHHHHhcChhHHHHhhhh
Q psy6388 168 QVYQH--AMDLT--FRKPYVNVNRWFTTIVNQPEFKKIVGEV 205 (480)
Q Consensus 168 ~~~~~--~l~~~--~r~~~PnL~RW~~ti~n~P~~k~v~~~~ 205 (480)
++... ..+.. ....+|++.+|+++|.++|+++.++...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 116 (126)
T cd03185 75 WFRAYEEVGGVKLLDEEKTPLLAAWAERFLELEAVKEVLPDR 116 (126)
T ss_pred HHHHHHHHcCccccCcccCchHHHHHHHHHhccHHHHhCCCH
Confidence 86431 22222 2467999999999999999999998774
No 37
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.45 E-value=3.3e-13 Score=107.86 Aligned_cols=72 Identities=13% Similarity=0.305 Sum_probs=62.9
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHh
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVA 78 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~ 78 (480)
.+||+++.|+++++++++++++|++++. .++...+ +.++++|+++||.|+||+|++ ||..|+||.||++||+
T Consensus 1 ~~ly~~~~s~~s~rv~~~L~e~gl~~e~~~v~~~~~-~~~~~~~~~inP~g~vP~L~~-~g~~l~Es~aI~~yLe 73 (73)
T cd03052 1 LVLYHWTQSFSSQKVRLVIAEKGLRCEEYDVSLPLS-EHNEPWFMRLNPTGEVPVLIH-GDNIICDPTQIIDYLE 73 (73)
T ss_pred CEEecCCCCccHHHHHHHHHHcCCCCEEEEecCCcC-ccCCHHHHHhCcCCCCCEEEE-CCEEEEcHHHHHHHhC
Confidence 3899999999999999999999999998 4444333 356789999999999999985 7899999999999985
No 38
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.44 E-value=8.9e-13 Score=112.23 Aligned_cols=106 Identities=13% Similarity=0.202 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhh
Q psy6388 87 EAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTL 166 (480)
Q Consensus 87 ~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L 166 (480)
+.+|+++++|+.++++.+.+.+...+.+ .....+.+.+.+.+.|..||++|.+++||+|+++|+|||++++.+
T Consensus 1 p~~ra~~r~w~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~ 73 (107)
T cd03186 1 PVARARSRLLMHRIEQDWYPLVDTIEKG-------RKKEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLL 73 (107)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhC-------cHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHH
Confidence 3589999999999999888776554432 145567788999999999999999999999999999999999997
Q ss_pred HHHHHhhCCccccCCCccHHHHHHHHhcChhHHHH
Q psy6388 167 LQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKI 201 (480)
Q Consensus 167 ~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v 201 (480)
..+....++ ....+|+|.+|+++|.++|+++.+
T Consensus 74 ~~~~~~~~~--~~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 74 WRLPALGIE--LPKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred HHHHHcCCC--CcccchHHHHHHHHHHCCHHHHHh
Confidence 654322222 224799999999999999999875
No 39
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=99.44 E-value=2.9e-13 Score=108.98 Aligned_cols=73 Identities=32% Similarity=0.393 Sum_probs=59.5
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCC-CcccEEEECCCceeeCHHHHHHHHhc
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSS-PKVPAFESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~-gkVPvL~~~dG~~L~ES~AIa~YL~~ 79 (480)
+++||.. .+|+.++|++++++|++|++ .+++..+. +++++|++.||. |+||+|++++|.+|+||.||++||++
T Consensus 2 ~l~l~~~--~~~~~~~r~~l~~~gv~~e~~~v~~~~~~-~~~~e~~~~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 2 TLTLYNG--RGRSERIRLLLAEKGVEYEDVRVDFEKGE-HKSPEFLAINPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp EEEEESS--STTTHHHHHHHHHTT--EEEEEEETTTTG-GGSHHHHHHTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred EEEEECC--CCchHHHHHHHHHhcccCceEEEeccccc-ccchhhhhcccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 3455554 45999999999999999998 66665443 456999999999 99999998669999999999999985
No 40
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.44 E-value=8e-13 Score=112.37 Aligned_cols=107 Identities=21% Similarity=0.417 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHhhhhhcccC--CCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhh
Q psy6388 89 EKSKIFDYVCFAQDELLPNACRWVFPILEIY--PYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTL 166 (480)
Q Consensus 89 e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~--~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L 166 (480)
+|+++++|+.|..+.+.+++..++.+..... ...+...+...+.+.+.|+.||++|.+++|++|+++|+|||++++.+
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~ 81 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRTPPEQRDPAAIAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSA 81 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHH
Confidence 5899999999999999998877655543322 23445667788999999999999999999999999999999999888
Q ss_pred HHHHHhhCCccccCCCccHHHHHHHHhcChhH
Q psy6388 167 LQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEF 198 (480)
Q Consensus 167 ~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~ 198 (480)
........ .+..||+|.+|+++|.++|.|
T Consensus 82 ~~~~~~~~---~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 82 YRWFELPI---ERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHccc---ccccCchHHHHHHHHHhCCCC
Confidence 65433222 257899999999999999975
No 41
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.43 E-value=6.4e-13 Score=115.33 Aligned_cols=108 Identities=21% Similarity=0.359 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHH
Q psy6388 89 EKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQ 168 (480)
Q Consensus 89 e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~ 168 (480)
+++++++|++|+.+.+.+.....+.|..... +...+.+...+.+.++.||++|++++||+|+++|+|||++++.+.+
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~ 78 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFGG---AEPPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVST 78 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHH
Confidence 5899999999999999988877766653221 2445677889999999999999988999999999999999999988
Q ss_pred HHH-hhCCccccCCCccHHHHHHHHhcChhHHHHh
Q psy6388 169 VYQ-HAMDLTFRKPYVNVNRWFTTIVNQPEFKKIV 202 (480)
Q Consensus 169 ~~~-~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~ 202 (480)
+.. ..++ ...+|+|.+|+++|.++|.|++..
T Consensus 79 ~~~~~~~~---~~~~p~l~~w~~~~~~~p~~~~~~ 110 (118)
T cd03177 79 LEALLPLD---LSKYPNVRAWLERLKALPPYEEAN 110 (118)
T ss_pred HHHhcCCC---hhhCchHHHHHHHHHcccchHHHH
Confidence 753 2222 357999999999999999999854
No 42
>KOG1422|consensus
Probab=99.42 E-value=3.1e-12 Score=119.45 Aligned_cols=183 Identities=20% Similarity=0.238 Sum_probs=134.8
Q ss_pred CCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc---CCCCCC-C
Q psy6388 12 DNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN---EQLKGK-T 86 (480)
Q Consensus 12 ~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~---~~Llg~-t 86 (480)
.||.++++.+.+...|++|.+ -+++ ..++++|+.+.|.|++|+|.. ||..+++|..|-++|.+ ..-+++ .
T Consensus 20 dcpf~qr~~m~L~~k~~~f~vttVd~----~~kp~~f~~~sp~~~~P~l~~-d~~~~tDs~~Ie~~Lee~l~~p~~~~~~ 94 (221)
T KOG1422|consen 20 DCPFCQRLFMTLELKGVPFKVTTVDL----SRKPEWFLDISPGGKPPVLKF-DEKWVTDSDKIEEFLEEKLPPPKLPTLA 94 (221)
T ss_pred CChhHHHHHHHHHHcCCCceEEEeec----CCCcHHHHhhCCCCCCCeEEe-CCceeccHHHHHHHHHHhcCCCCCcccC
Confidence 689999999999999999988 5555 357899999999999999996 77789999999999998 222222 1
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccC---CCcccCCCCChhhhhHH
Q psy6388 87 EAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLT---RTYLVGDYITLADICNA 163 (480)
Q Consensus 87 ~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~---~tFLvGe~lTlADI~l~ 163 (480)
+.|.+. +.++++..+...+. ...+..-+.....+.+.|..||.||++ +.||.|+++|+||+.++
T Consensus 95 ~~E~as-------ag~diF~kF~~fi~------ksk~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLl 161 (221)
T KOG1422|consen 95 PPESAS-------AGSDIFAKFSAFIK------KSKDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLL 161 (221)
T ss_pred CHHHHh-------hHHHHHHHHHHHHh------CchhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhc
Confidence 344443 33455544443322 111223344556777888999999985 78999999999999999
Q ss_pred hhhHHHHH---hhCCccccCCCccHHHHHHHHhcChhHHHHhhhhhhhhhhc
Q psy6388 164 CTLLQVYQ---HAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGEVKLCEKQV 212 (480)
Q Consensus 164 ~~L~~~~~---~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~~~~~ek~f 212 (480)
+-|+.+.. +.-+-+..+.+++|.||+..+.++..|......-+.+...+
T Consensus 162 PKL~~i~va~k~yk~~~IP~~lt~V~rYl~~~ya~d~F~~tcp~d~ei~~~y 213 (221)
T KOG1422|consen 162 PKLHHIKVAAKHYKNFEIPASLTGVWRYLKNAYARDEFTNTCPADQEIILAY 213 (221)
T ss_pred hhHHHHHHHHHHhcCCCCchhhhHHHHHHHHHHhHHHhhcCCchHHHHHHhh
Confidence 99998742 22233446789999999999999998887766544444444
No 43
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.41 E-value=8.4e-13 Score=114.89 Aligned_cols=114 Identities=19% Similarity=0.266 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHhhh-hhcccCCC-ChHhHHHHHHHHHHHHHHHHHHcc--CCCcccCCCCChhhhhH
Q psy6388 87 EAEKSKIFDYVCFAQDELLPNACRWVF-PILEIYPY-NKQTVDSAKDGLKRNLAKLDKHLL--TRTYLVGDYITLADICN 162 (480)
Q Consensus 87 ~~e~A~V~qwl~f~~~~l~~~~~~~~~-p~~g~~~~-nk~~~~~a~~~l~~~L~~Le~~L~--~~tFLvGe~lTlADI~l 162 (480)
|.+++.+++|+.++.+++.+.....++ +..+.... .....+...+.+.+.|..||++|. .++||+|+++|+|||++
T Consensus 1 p~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~ 80 (121)
T cd03191 1 PKKRARVRALALIIACDIHPLNNLRVLKYLTEELGLDEEAKNAWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICL 80 (121)
T ss_pred ChhHHHHHHHHHHHHccCCccccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHH
Confidence 357999999999999988876433222 22111111 233345566778999999999998 44799999999999999
Q ss_pred HhhhHHHHHhhCCccccCCCccHHHHHHHHhcChhHHHHhh
Q psy6388 163 ACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVG 203 (480)
Q Consensus 163 ~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~ 203 (480)
++.+.++....++ ...+|+|.+|+++|.++|.|+.++.
T Consensus 81 ~~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~~~~~~ 118 (121)
T cd03191 81 VPQVYNARRFGVD---LSPYPTIARINEACLELPAFQAAHP 118 (121)
T ss_pred HHHHHHHHHhCCC---cccCcHHHHHHHHHHhChhHHHhCc
Confidence 9998876544332 3689999999999999999999764
No 44
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.41 E-value=9.5e-13 Score=104.20 Aligned_cols=69 Identities=20% Similarity=0.294 Sum_probs=61.2
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHH
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFV 77 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL 77 (480)
.+||+++.||+|++++++++++|++++. .++.. ++.++|.+.||.|+||+|+++||..|+||.||++|+
T Consensus 1 ~~ly~~~~~p~~~rv~~~L~~~gl~~e~~~v~~~----~~~~~~~~~np~~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 1 PILYSFRRCPYAMRARMALLLAGITVELREVELK----NKPAEMLAASPKGTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred CEEEecCCCcHHHHHHHHHHHcCCCcEEEEeCCC----CCCHHHHHHCCCCCCCEEEECCCcEEecHHHHHHhh
Confidence 3799999999999999999999999998 44432 356899999999999999987799999999999997
No 45
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=99.40 E-value=1e-12 Score=103.83 Aligned_cols=72 Identities=26% Similarity=0.443 Sum_probs=63.0
Q ss_pred EEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHh
Q psy6388 6 TLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVA 78 (480)
Q Consensus 6 tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~ 78 (480)
+||+++.||++++++++++++|++++. .+++..+ +...++|.+.+|.|+||+|+.++|..|+||.||++||+
T Consensus 2 ~Ly~~~~s~~~~~~~~~L~~~~l~~~~~~v~~~~~-~~~~~~~~~~~p~~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 2 KLYDSPTAPNPRRVRIFLAEKGIDVPLVTVDLAAG-EQRSPEFLAKNPAGTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred EEEeCCCCcchHHHHHHHHHcCCCceEEEeecccC-ccCCHHHHhhCCCCCCCEEEeCCCCEEecHHHHHHHhC
Confidence 899999999999999999999999988 4444322 34578899999999999999778889999999999985
No 46
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.39 E-value=3e-12 Score=112.22 Aligned_cols=114 Identities=18% Similarity=0.400 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHhhhh-----hcccCCCChHhHHHHHHHHHHHHHHHHHHc-cCCCcccCCCCChhhhhH
Q psy6388 89 EKSKIFDYVCFAQDELLPNACRWVFP-----ILEIYPYNKQTVDSAKDGLKRNLAKLDKHL-LTRTYLVGDYITLADICN 162 (480)
Q Consensus 89 e~A~V~qwl~f~~~~l~~~~~~~~~p-----~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L-~~~tFLvGe~lTlADI~l 162 (480)
+++++++|+.|..+.+.+.+...+.+ ..+..+.++...+.+.+.+.+.++.+|++| ++++|++|+++|+|||++
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l 80 (126)
T cd03183 1 KRARVDEYLAWQHTNLRLGCAKYFWQKVLLPLLGGKPVSPEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSA 80 (126)
T ss_pred CcccHHHHHHHHHhhhHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHH
Confidence 36789999999998888766543322 222234567778888999999999999984 557899999999999999
Q ss_pred HhhhHHHHHhhCCccccCCCccHHHHHHHHhc--ChhHHHHhhh
Q psy6388 163 ACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVN--QPEFKKIVGE 204 (480)
Q Consensus 163 ~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n--~P~~k~v~~~ 204 (480)
++.+.+...... ...+.||+|.+|+++|.+ +|.++.+.+-
T Consensus 81 ~~~~~~~~~~~~--~~~~~~p~l~~w~~~~~~~~~p~~~~~~~~ 122 (126)
T cd03183 81 VCEIMQPEAAGY--DVFEGRPKLAAWRKRVKEAGNPLFDEAHKI 122 (126)
T ss_pred HHHHHHHHhcCC--cccccCchHHHHHHHHHHhcchhHHHHHHH
Confidence 998876643333 235789999999999999 9999997754
No 47
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.38 E-value=1.8e-12 Score=105.11 Aligned_cols=73 Identities=23% Similarity=0.345 Sum_probs=63.2
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECC--CceeeCHHHHHHHHhc
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSD--GTILTSSSAITYFVAN 79 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~d--G~~L~ES~AIa~YL~~ 79 (480)
++||+++. |++++++++++++|++++. .++...+ ++.+++|++.||.|+||+|++++ |..|+||.||++||++
T Consensus 2 ~~Ly~~~~-~~~~~v~~~l~~~gl~~~~~~~~~~~~-~~~~~~~~~~~p~~~vP~l~~~~~~g~~l~eS~aI~~yL~~ 77 (81)
T cd03048 2 ITLYTHGT-PNGFKVSIMLEELGLPYEIHPVDISKG-EQKKPEFLKINPNGRIPAIVDHNGTPLTVFESGAILLYLAE 77 (81)
T ss_pred eEEEeCCC-CChHHHHHHHHHcCCCcEEEEecCcCC-cccCHHHHHhCcCCCCCEEEeCCCCceEEEcHHHHHHHHHH
Confidence 69999886 9999999999999999998 4444222 45678999999999999999865 8899999999999986
No 48
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.38 E-value=3.3e-12 Score=115.08 Aligned_cols=112 Identities=23% Similarity=0.285 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhH
Q psy6388 88 AEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLL 167 (480)
Q Consensus 88 ~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~ 167 (480)
+.+++|++|+++....+.+....... ..+++..+.+...+.+.|+.||++|.+++||+|+++|+|||++++.+.
T Consensus 3 ~~~a~i~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~ 76 (142)
T cd03190 3 ELRSEIDELNEWIYDNINNGVYKAGF------ATTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLI 76 (142)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHhh------ccCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHH
Confidence 56899999999999888776543211 345667788999999999999999999999999999999999999987
Q ss_pred HHHHh---hC--CccccCCCccHHHHHHHHhcChhHHHHhhhh
Q psy6388 168 QVYQH---AM--DLTFRKPYVNVNRWFTTIVNQPEFKKIVGEV 205 (480)
Q Consensus 168 ~~~~~---~l--~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~~ 205 (480)
++... .. +......||+|.+|+++|.++|.+++++...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~~~ 119 (142)
T cd03190 77 RFDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQNPGVAETTNFD 119 (142)
T ss_pred HHHHHhhhhcccccchhhhCchHHHHHHHHhcCchHhhhcCHH
Confidence 65321 11 1122458999999999999999999988763
No 49
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.38 E-value=2.1e-12 Score=103.21 Aligned_cols=73 Identities=23% Similarity=0.336 Sum_probs=63.4
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~ 79 (480)
++||+.+.||++++++++++++|++++. .++...+ ++.+++|.+.||.|+||+|++ +|..|+||.||++||++
T Consensus 2 ~~Ly~~~~s~~s~~v~~~l~~~~i~~~~~~~~~~~~-~~~~~~~~~~~P~~~vP~l~~-~g~~l~es~aI~~yL~~ 75 (76)
T cd03053 2 LKLYGAAMSTCVRRVLLCLEEKGVDYELVPVDLTKG-EHKSPEHLARNPFGQIPALED-GDLKLFESRAITRYLAE 75 (76)
T ss_pred eEEEeCCCChhHHHHHHHHHHcCCCcEEEEeCcccc-ccCCHHHHhhCCCCCCCEEEE-CCEEEEcHHHHHHHHhh
Confidence 5999999999999999999999999998 4444322 356789999999999999996 68899999999999975
No 50
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.37 E-value=2e-12 Score=102.07 Aligned_cols=72 Identities=24% Similarity=0.417 Sum_probs=62.6
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHh
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVA 78 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~ 78 (480)
++||+++.||++++++++++++|++++. .++...+ +++.++|.+.||.|+||+|++ +|..|+||.||++||+
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~~~~~~~~~i~~~~~-~~~~~~~~~~~p~~~vP~l~~-~~~~i~es~aI~~yl~ 73 (73)
T cd03056 1 MKLYGFPLSGNCYKVRLLLALLGIPYEWVEVDILKG-ETRTPEFLALNPNGEVPVLEL-DGRVLAESNAILVYLA 73 (73)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEecCCCc-ccCCHHHHHhCCCCCCCEEEE-CCEEEEcHHHHHHHhC
Confidence 3899999999999999999999999998 4444222 456789999999999999997 5889999999999985
No 51
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.37 E-value=2.3e-12 Score=101.97 Aligned_cols=69 Identities=25% Similarity=0.300 Sum_probs=61.2
Q ss_pred EEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc
Q psy6388 6 TLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 6 tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~ 79 (480)
+||+.+.||++++++++++++|++++. .++. .+..++|++.||.|+||+|++ +|..|+||.||++||++
T Consensus 2 ~ly~~~~~~~~~~v~~~l~~~gi~~~~~~v~~----~~~~~~~~~~~p~~~vP~l~~-~~~~l~es~aI~~yL~~ 71 (73)
T cd03059 2 TLYSGPDDVYSHRVRIVLAEKGVSVEIIDVDP----DNPPEDLAELNPYGTVPTLVD-RDLVLYESRIIMEYLDE 71 (73)
T ss_pred EEEECCCChhHHHHHHHHHHcCCccEEEEcCC----CCCCHHHHhhCCCCCCCEEEE-CCEEEEcHHHHHHHHHh
Confidence 899999999999999999999999998 3332 245789999999999999986 66899999999999985
No 52
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=99.37 E-value=2.2e-12 Score=103.47 Aligned_cols=72 Identities=29% Similarity=0.391 Sum_probs=62.1
Q ss_pred EEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc
Q psy6388 6 TLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 6 tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~ 79 (480)
+||+++.+ ++++++++++++|++++. .++...+ ++++++|++.||.|+||+|+++||..|+||.||++||++
T Consensus 2 ~Ly~~~~~-~~~~v~~~l~~~~i~~~~~~~~~~~~-~~~~~~~~~~np~~~vP~l~~~~g~~l~eS~aI~~yL~~ 74 (77)
T cd03057 2 KLYYSPGA-CSLAPHIALEELGLPFELVRVDLRTK-TQKGADYLAINPKGQVPALVLDDGEVLTESAAILQYLAD 74 (77)
T ss_pred EEEeCCCC-chHHHHHHHHHcCCCceEEEEecccC-ccCCHhHHHhCCCCCCCEEEECCCcEEEcHHHHHHHHHH
Confidence 89998865 689999999999999998 4454333 456899999999999999998768999999999999986
No 53
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.37 E-value=1.6e-12 Score=109.45 Aligned_cols=95 Identities=25% Similarity=0.309 Sum_probs=77.8
Q ss_pred HHHHhcC-CCCCCCHHHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccC
Q psy6388 74 TYFVANE-QLKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVG 152 (480)
Q Consensus 74 a~YL~~~-~Llg~t~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvG 152 (480)
+|||++. +|+|.++.++++|++|+++...++.. ....++.+.+..||++|.+++|++|
T Consensus 1 ~r~~~~~~~~~~~~~~~~~~vd~~~d~~~~~l~~---------------------~~~~~~~~~l~~le~~L~~~~fl~G 59 (96)
T cd03200 1 ARFLYRLLGPAPNAPNAATNIDSWVDTAIFQLAE---------------------GSSKEKAAVLRALNSALGRSPWLVG 59 (96)
T ss_pred CchHHHHhcccCCCchHHHHHHHHHHHHHHHHhc---------------------CCHHHHHHHHHHHHHHHcCCCccCC
Confidence 4899984 89999999999999999987655531 1344666888999999999999999
Q ss_pred CCCChhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcC
Q psy6388 153 DYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQ 195 (480)
Q Consensus 153 e~lTlADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~ 195 (480)
+++|+|||++++.+.+. ... ...+|||.+|+++|.++
T Consensus 60 d~~tiADi~l~~~l~~~---~~~---~~~~p~l~~w~~r~~~~ 96 (96)
T cd03200 60 SEFTVADIVSWCALLQT---GLA---SAAPANVQRWLKSCENL 96 (96)
T ss_pred CCCCHHHHHHHHHHHHc---ccc---cccChHHHHHHHHHHhC
Confidence 99999999999887643 121 35799999999999764
No 54
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.36 E-value=2.5e-12 Score=103.01 Aligned_cols=73 Identities=22% Similarity=0.189 Sum_probs=62.7
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~ 79 (480)
++||+.+.++++++++++++++|++++. .++...+ +...++|.+.||.|+||+|++ +|.+|+||.||++||++
T Consensus 1 ~~ly~~~~s~~~~~v~~~l~~~g~~~~~~~v~~~~~-~~~~~~~~~~~p~~~vP~L~~-~~~~l~eS~aI~~Yl~~ 74 (76)
T cd03050 1 LKLYYDLMSQPSRAVYIFLKLNKIPFEECPIDLRKG-EQLTPEFKKINPFGKVPAIVD-GDFTLAESVAILRYLAR 74 (76)
T ss_pred CEEeeCCCChhHHHHHHHHHHcCCCcEEEEecCCCC-CcCCHHHHHhCcCCCCCEEEE-CCEEEEcHHHHHHHHHh
Confidence 3899999999999999999999999998 4444322 345678999999999999996 67899999999999985
No 55
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.35 E-value=2e-12 Score=104.20 Aligned_cols=73 Identities=18% Similarity=0.160 Sum_probs=62.6
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEEC-CCceeeCHHHHHHHHhc
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESS-DGTILTSSSAITYFVAN 79 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~-dG~~L~ES~AIa~YL~~ 79 (480)
++||+++.||+|+++++++.++||+|+. ++...+ ....++|++.||.|+||+|+++ +|..|+||.||++||++
T Consensus 2 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~-~~v~~~-~~~~~~~~~~~p~~~vP~l~~~~~~~~l~es~~I~~yL~~ 75 (77)
T cd03041 2 LELYEFEGSPFCRLVREVLTELELDVIL-YPCPKG-SPKRDKFLEKGGKVQVPYLVDPNTGVQMFESADIVKYLFK 75 (77)
T ss_pred ceEecCCCCchHHHHHHHHHHcCCcEEE-EECCCC-hHHHHHHHHhCCCCcccEEEeCCCCeEEEcHHHHHHHHHH
Confidence 5999999999999999999999999998 343222 2346789999999999999975 47899999999999985
No 56
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.35 E-value=3.4e-12 Score=101.48 Aligned_cols=71 Identities=18% Similarity=0.281 Sum_probs=61.2
Q ss_pred EEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHh
Q psy6388 6 TLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVA 78 (480)
Q Consensus 6 tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~ 78 (480)
+||+++.++++++++++++++|++++. .++...+ +...++|.+.||.|+||+|++ +|..|+||.||++||+
T Consensus 2 ~l~~~~~s~~~~~v~~~L~~~~l~~~~~~~~~~~~-~~~~~~~~~~nP~~~vP~L~~-~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 2 TIWGRRSSINVQKVLWLLDELGLPYERIDAGGQFG-GLDTPEFLAMNPNGRVPVLED-GDFVLWESNAILRYLA 73 (73)
T ss_pred EEEecCCCcchHHHHHHHHHcCCCCEEEEeccccc-cccCHHHHhhCCCCCCCEEEE-CCEEEECHHHHHHHhC
Confidence 899999999999999999999999998 3333222 346789999999999999986 6779999999999985
No 57
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.35 E-value=3.5e-12 Score=101.25 Aligned_cols=69 Identities=19% Similarity=0.187 Sum_probs=60.9
Q ss_pred EEEEcCCCchHHHHHHHHHh--cCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHh
Q psy6388 6 TLYSWPDNFRTYQILIAAEY--SSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVA 78 (480)
Q Consensus 6 tLY~~~~spra~kv~iaa~~--~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~ 78 (480)
+||+++.||+++++++++++ +|++++. .++. ..+.++|++.+|.|+||+|+++||..|+||.||++||+
T Consensus 2 ~Ly~~~~s~~~~~~~~~l~~~~~~i~~~~~~~~~----~~~~~~~~~~~p~~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 2 KLLYSPTSPYVRKVRVAAHETGLGDDVELVLVNP----WSDDESLLAVNPLGKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred EEecCCCCcHHHHHHHHHHHhCCCCCcEEEEcCc----ccCChHHHHhCCCCCCCEEEECCCCEEECHHHHHhhhC
Confidence 89999999999999999999 8899987 3332 24578999999999999999778899999999999985
No 58
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.32 E-value=5.7e-12 Score=100.38 Aligned_cols=69 Identities=16% Similarity=0.194 Sum_probs=60.8
Q ss_pred EEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCC-CcccEEEECCCceeeCHHHHHHHHhc
Q psy6388 6 TLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSS-PKVPAFESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 6 tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~-gkVPvL~~~dG~~L~ES~AIa~YL~~ 79 (480)
+||+++.||++++++++++++|++++. .++. ..+.++|.+.||. |+||+|++ +|..|+||.||++||++
T Consensus 2 ~Ly~~~~sp~~~~v~~~l~~~gl~~~~~~~~~----~~~~~~~~~~~p~~~~vP~l~~-~~~~l~eS~aI~~yL~~ 72 (74)
T cd03058 2 KLLGAWASPFVLRVRIALALKGVPYEYVEEDL----GNKSELLLASNPVHKKIPVLLH-NGKPICESLIIVEYIDE 72 (74)
T ss_pred EEEECCCCchHHHHHHHHHHcCCCCEEEEeCc----ccCCHHHHHhCCCCCCCCEEEE-CCEEeehHHHHHHHHHh
Confidence 899999999999999999999999998 3332 2467899999995 99999996 67899999999999975
No 59
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=99.32 E-value=6.2e-12 Score=99.36 Aligned_cols=71 Identities=24% Similarity=0.382 Sum_probs=62.0
Q ss_pred EEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHh
Q psy6388 6 TLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVA 78 (480)
Q Consensus 6 tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~ 78 (480)
+||+++.++++++++++++++|++++. .+++..+ .+..++|++.+|.|+||+|++ +|..|+||.||++||+
T Consensus 2 ~L~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~-~~~~~~~~~~~p~~~vP~l~~-~~~~l~es~aI~~yL~ 73 (73)
T cd03042 2 ILYSYFRSSASYRVRIALNLKGLDYEYVPVNLLKG-EQLSPAYRALNPQGLVPTLVI-DGLVLTQSLAIIEYLD 73 (73)
T ss_pred EEecCCCCcchHHHHHHHHHcCCCCeEEEecCccC-CcCChHHHHhCCCCCCCEEEE-CCEEEEcHHHHHHHhC
Confidence 899999999999999999999999998 4454322 356789999999999999996 5789999999999985
No 60
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=99.31 E-value=3.6e-12 Score=100.98 Aligned_cols=71 Identities=20% Similarity=0.168 Sum_probs=59.9
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~ 79 (480)
++||+++.++++++++++++++|++++. .++.. .....+|.+.||.|+||+|++ +|..|+||.||++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~~~~~---~~~~~~~~~~~p~~~vP~L~~-~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 1 YKLTYFNIRGRGEPIRLLLADAGVEYEDVRITYE---EWPELDLKPTLPFGQLPVLEI-DGKKLTQSNAILRYLAR 72 (72)
T ss_pred CEEEEEcCcchHHHHHHHHHHCCCCcEEEEeCHH---HhhhhhhccCCcCCCCCEEEE-CCEEEEecHHHHHHhhC
Confidence 4899999999999999999999999998 33321 123345889999999999996 67899999999999974
No 61
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.31 E-value=3.5e-12 Score=107.77 Aligned_cols=100 Identities=18% Similarity=0.263 Sum_probs=82.5
Q ss_pred HHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHHHHHhh
Q psy6388 94 FDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQVYQHA 173 (480)
Q Consensus 94 ~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~~ 173 (480)
++|+.|..+.+.+.+...+.+. .....+.....+.+.++.||.+|++++||+|+++|+|||++++.+.++...
T Consensus 2 ~~w~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~- 74 (103)
T cd03207 2 LRWLFFYAGVVEPALIAKAMGI------EEPARMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQF- 74 (103)
T ss_pred eeeeeeccccccHHHHHHHcCC------CcchhhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHc-
Confidence 5788888888887766554432 234567788899999999999999999999999999999999999887543
Q ss_pred CCccccCCCccHHHHHHHHhcChhHHHHhh
Q psy6388 174 MDLTFRKPYVNVNRWFTTIVNQPEFKKIVG 203 (480)
Q Consensus 174 l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~ 203 (480)
+ .+..+|+|.+|++++.++|.++.+..
T Consensus 75 -~--~~~~~p~l~~w~~~~~~~p~~~~~~~ 101 (103)
T cd03207 75 -G--LLPERPAFDAYIARITDRPAFQRAAA 101 (103)
T ss_pred -C--CCCCChHHHHHHHHHHcCHHHHHHhc
Confidence 2 25689999999999999999998764
No 62
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.31 E-value=4.8e-12 Score=100.86 Aligned_cols=70 Identities=17% Similarity=0.159 Sum_probs=60.7
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~ 79 (480)
++||+++.++++++++++++++|++++. .++. ....++|.+.+|.|+||+|++ +|..|+||.||++||++
T Consensus 2 ~~Ly~~~~~~~~~~v~~~L~~~~i~~e~~~v~~----~~~~~~~~~~~p~~~vP~l~~-~~~~l~es~aI~~yL~~ 72 (73)
T cd03076 2 YTLTYFPVRGRAEAIRLLLADQGISWEEERVTY----EEWQESLKPKMLFGQLPCFKD-GDLTLVQSNAILRHLGR 72 (73)
T ss_pred cEEEEeCCcchHHHHHHHHHHcCCCCEEEEecH----HHhhhhhhccCCCCCCCEEEE-CCEEEEcHHHHHHHHhc
Confidence 5999999999999999999999999998 3333 123558999999999999996 67899999999999975
No 63
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.30 E-value=4.4e-12 Score=101.57 Aligned_cols=68 Identities=28% Similarity=0.471 Sum_probs=60.8
Q ss_pred EEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc
Q psy6388 7 LYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 7 LY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~ 79 (480)
||+++.||+|++++++++++||+++. .++. . .+.++|.+.+|.|+||+|+ +||..|+||.+|++||++
T Consensus 1 Ly~~~~Sp~~~kv~~~l~~~~i~~~~~~v~~--~--~~~~~~~~~~p~~~vPvL~-~~g~~l~dS~~I~~yL~~ 69 (75)
T PF13417_consen 1 LYGFPGSPYSQKVRLALEEKGIPYELVPVDP--E--EKRPEFLKLNPKGKVPVLV-DDGEVLTDSAAIIEYLEE 69 (75)
T ss_dssp EEEETTSHHHHHHHHHHHHHTEEEEEEEEBT--T--STSHHHHHHSTTSBSSEEE-ETTEEEESHHHHHHHHHH
T ss_pred CCCcCCChHHHHHHHHHHHcCCeEEEeccCc--c--cchhHHHhhcccccceEEE-ECCEEEeCHHHHHHHHHH
Confidence 89999999999999999999999998 3332 2 3478999999999999999 578999999999999987
No 64
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=99.30 E-value=1.1e-11 Score=102.84 Aligned_cols=71 Identities=20% Similarity=0.193 Sum_probs=62.1
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHh
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVA 78 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~ 78 (480)
.++||+.+.||+|++++++++++|++|+. .++.. ...++|.+.||.|+||+|++++|..|+||.||++||+
T Consensus 18 ~~~Ly~~~~sp~~~kv~~~L~~~gl~~~~~~v~~~----~~~~~~~~~np~~~vPvL~~~~g~~l~eS~aI~~yLe 89 (89)
T cd03055 18 IIRLYSMRFCPYAQRARLVLAAKNIPHEVININLK----DKPDWFLEKNPQGKVPALEIDEGKVVYESLIICEYLD 89 (89)
T ss_pred cEEEEeCCCCchHHHHHHHHHHcCCCCeEEEeCCC----CCcHHHHhhCCCCCcCEEEECCCCEEECHHHHHHhhC
Confidence 57999999999999999999999999998 33331 3457799999999999999866889999999999985
No 65
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.29 E-value=4.7e-12 Score=106.72 Aligned_cols=100 Identities=23% Similarity=0.297 Sum_probs=77.8
Q ss_pred HHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHHHHHh
Q psy6388 93 IFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQVYQH 172 (480)
Q Consensus 93 V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~ 172 (480)
+++|++|..+.+.+......+...+..+ ...+.+.+.+.+.++.||++|++++|++|+++|+|||++++.+.+....
T Consensus 1 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~ 77 (100)
T cd03206 1 VQRWLSVAAGEIANGPAAARLITLFGAP---LDKETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPEG 77 (100)
T ss_pred CceehhhhhhhcccchhHHHHHHHhCCH---hHHHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhcc
Confidence 4689999999987655444433333222 2456788999999999999999999999999999999999888654332
Q ss_pred hCCccccCCCccHHHHHHHHhcChhH
Q psy6388 173 AMDLTFRKPYVNVNRWFTTIVNQPEF 198 (480)
Q Consensus 173 ~l~~~~r~~~PnL~RW~~ti~n~P~~ 198 (480)
.. .+..||+|.+|+++|.++|.|
T Consensus 78 ~~---~~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 78 GV---DLEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred CC---ChhhCcHHHHHHHHHHhCcCC
Confidence 22 246899999999999999975
No 66
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.29 E-value=2.2e-11 Score=117.85 Aligned_cols=191 Identities=19% Similarity=0.184 Sum_probs=138.8
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEe---eccCCCCC--CCCC------------------hhhhhhCCC--C--cc
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNI---PKDFVFGK--SNKN------------------ADFVSKFSS--P--KV 56 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~---~v~~~~~~--~~~~------------------~efl~~nP~--g--kV 56 (480)
.+.||.+-.||+++|.+|.-+++||.--+ .++..+.+ .... +-|....|. | +|
T Consensus 51 RYhLYvslaCPWAHRTLI~R~LkgLE~~Isvsvv~~~m~~~GW~F~~~~~g~t~dpl~g~~~L~~~Y~~adP~YsgRvTV 130 (324)
T COG0435 51 RYHLYVSLACPWAHRTLIFRALKGLEPVISVSVVHPLMDENGWTFDPEFPGATGDPLYGIERLSQLYTRADPDYSGRVTV 130 (324)
T ss_pred eEEEEEEecCchHHHHHHHHHHhcccccceEEEecccccCCCceEcCCCCCCCCCcccchhHHHHHHhhcCCCCCCceeE
Confidence 46899999999999999999999985433 12211111 0000 111222332 2 69
Q ss_pred cEEEECCC--ceeeCHHHHHHHHhc---------CCCCCCCHHHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHh
Q psy6388 57 PAFESSDG--TILTSSSAITYFVAN---------EQLKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQT 125 (480)
Q Consensus 57 PvL~~~dG--~~L~ES~AIa~YL~~---------~~Llg~t~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~ 125 (480)
|||-+..- .+-.||..|++.+.. ..|+| ..-|.+|+.|.+++...+...+...- .....++
T Consensus 131 PVLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~dlyP--~~Lr~eId~~n~~Iy~~vNNGVYk~G------FA~tq~a 202 (324)
T COG0435 131 PVLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVDLYP--EALRTEIDELNKWIYDTVNNGVYKAG------FATTQEA 202 (324)
T ss_pred EEEEecCCCeeecCCcHHHHHHHHHHHHHHhhhccccCC--HHHHHHHHHHHhhhcccccCceeeec------ccchHHH
Confidence 99997643 345799999999976 36888 56789999999988766654433221 2456788
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHHHHHh---h--CCccccCCCccHHHHHHHHhcChhHHH
Q psy6388 126 VDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQVYQH---A--MDLTFRKPYVNVNRWFTTIVNQPEFKK 200 (480)
Q Consensus 126 ~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~---~--l~~~~r~~~PnL~RW~~ti~n~P~~k~ 200 (480)
.+++...+-..|+.||..|+++.||+|+++|-||+-++++|.+.-.. . ....-...||||..|+..+-+.|.|.+
T Consensus 203 Yeea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq~pg~~~ 282 (324)
T COG0435 203 YEEAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQLPGFAE 282 (324)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHhcCccccc
Confidence 89999999999999999999999999999999999999999886221 1 122223569999999999999999987
Q ss_pred Hh
Q psy6388 201 IV 202 (480)
Q Consensus 201 v~ 202 (480)
..
T Consensus 283 T~ 284 (324)
T COG0435 283 TV 284 (324)
T ss_pred cc
Confidence 54
No 67
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.28 E-value=9.4e-12 Score=98.51 Aligned_cols=68 Identities=22% Similarity=0.258 Sum_probs=56.3
Q ss_pred CCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc
Q psy6388 12 DNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 12 ~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~ 79 (480)
.||+++|++++++++|+++++ .+..........++|.+.||.|+||+|++++|.+++||.+|++||++
T Consensus 1 ~sP~a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~~~p~~~VP~L~~~~g~vi~eS~~I~~yL~~ 69 (70)
T PF13409_consen 1 FSPFAHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLALNPRGKVPVLVDPDGTVINESLAILEYLEE 69 (70)
T ss_dssp T-HHHHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHHHSTT-SSSEEEETTTEEEESHHHHHHHHHH
T ss_pred CchHhHHHHHHHHHhCCCCEEEEEeeecCccccChhhhccCcCeEEEEEEECCCCEeeCHHHHHHHHhc
Confidence 389999999999999999998 33222233456689999999999999999899999999999999975
No 68
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.28 E-value=1.5e-11 Score=98.00 Aligned_cols=71 Identities=27% Similarity=0.374 Sum_probs=60.6
Q ss_pred EEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc
Q psy6388 6 TLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 6 tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~ 79 (480)
+||+++. +++++++++++++|++++. .++...+ ..+.++|.+.+|.|+||+|++ +|..|+||.||++||++
T Consensus 2 ~l~~~~~-~~~~~v~~~l~~~~i~~~~~~~~~~~~-~~~~~~~~~~~p~~~vP~l~~-~g~~l~es~aI~~yL~~ 73 (76)
T cd03046 2 TLYHLPR-SRSFRILWLLEELGLPYELVLYDRGPG-EQAPPEYLAINPLGKVPVLVD-GDLVLTESAAIILYLAE 73 (76)
T ss_pred EEEeCCC-CChHHHHHHHHHcCCCcEEEEeCCCCC-ccCCHHHHhcCCCCCCCEEEE-CCEEEEcHHHHHHHHHH
Confidence 8999875 6899999999999999998 4443222 356789999999999999985 77899999999999986
No 69
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=99.27 E-value=1.3e-11 Score=97.49 Aligned_cols=70 Identities=19% Similarity=0.249 Sum_probs=58.2
Q ss_pred EEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc
Q psy6388 6 TLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 6 tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~ 79 (480)
+||+++.||+|+++|+++.++|++++. +..... ......+.+|.|+||+|+++||..|+||.||++||++
T Consensus 2 ~Ly~~~~~p~~~rvr~~L~~~gl~~~~-~~~~~~---~~~~~~~~~~~~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 2 KLYIYEHCPFCVKARMIAGLKNIPVEQ-IILQND---DEATPIRMIGAKQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred ceEecCCCcHhHHHHHHHHHcCCCeEE-EECCCC---chHHHHHhcCCCccCEEEeCCCeEeehHHHHHHHHhC
Confidence 899999999999999999999999997 222211 1234467899999999998668899999999999974
No 70
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.26 E-value=1e-11 Score=104.80 Aligned_cols=101 Identities=24% Similarity=0.373 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHhhhhhc--ccCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhh
Q psy6388 89 EKSKIFDYVCFAQDELLPNACRWVFPIL--EIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTL 166 (480)
Q Consensus 89 e~A~V~qwl~f~~~~l~~~~~~~~~p~~--g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L 166 (480)
+||++++|+.+..+.+.+.......+.. +..+.+.+..+.....+.+.++.||.+|++++|++|+++|+|||++++.+
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~ 81 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLGLGEADAEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYT 81 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHH
Confidence 6899999999998888877655433322 23455567788899999999999999999889999999999999999998
Q ss_pred HHHHHhhCCccccCCCccHHHHHHHH
Q psy6388 167 LQVYQHAMDLTFRKPYVNVNRWFTTI 192 (480)
Q Consensus 167 ~~~~~~~l~~~~r~~~PnL~RW~~ti 192 (480)
.++....++ ...+|+|.+|++++
T Consensus 82 ~~~~~~~~~---~~~~p~l~~~~~~~ 104 (105)
T cd03179 82 HVADEGGFD---LADYPAIRAWLARI 104 (105)
T ss_pred HhccccCCC---hHhCccHHHHHHhh
Confidence 886433232 46799999999987
No 71
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.25 E-value=5.9e-11 Score=103.64 Aligned_cols=113 Identities=16% Similarity=0.162 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHH
Q psy6388 89 EKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQ 168 (480)
Q Consensus 89 e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~ 168 (480)
+++.|++.++.+. ++......+++. +......+...+.+.+.+..||++|.+++||+|+++|+||+++++.+.+
T Consensus 2 e~~~id~~~~~~~-d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~ 75 (121)
T cd03209 2 ERIRVDMLEQQAM-DLRMGLARICYS-----PDFEKLKPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQ 75 (121)
T ss_pred chHHHHHHHHHHH-HHHHHHHHhhcC-----cchHHHHHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHH
Confidence 5788888887543 454544444331 1223555667888999999999999999999999999999999998887
Q ss_pred HHHhhCCccccCCCccHHHHHHHHhcChhHHHHhhhhhhhh
Q psy6388 169 VYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGEVKLCE 209 (480)
Q Consensus 169 ~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~~~~~e 209 (480)
+.. ........||+|.+|+++|.++|.+++++..-+...
T Consensus 76 ~~~--~~~~~~~~~P~l~~~~~rv~~~p~vk~~~~~~~~~~ 114 (121)
T cd03209 76 HRI--FEPDCLDAFPNLKDFLERFEALPKISAYMKSDRFIK 114 (121)
T ss_pred HHH--hCccccccChHHHHHHHHHHHCHHHHHHHhcccCcC
Confidence 743 222235689999999999999999999987755443
No 72
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=99.24 E-value=2e-11 Score=99.69 Aligned_cols=73 Identities=21% Similarity=0.253 Sum_probs=58.2
Q ss_pred EEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhh-----hCCCCcccEEEECCCceeeCHHHHHHHHhc
Q psy6388 6 TLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVS-----KFSSPKVPAFESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 6 tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~-----~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~ 79 (480)
+||++..++++++++++++++|++++. .+++..++....+++.. .+|.|+||+|++ ||.+|+||.||++||++
T Consensus 2 ~l~y~~~~~~~~~~~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~~~~P~g~vP~L~~-~g~~l~ES~AIl~YLa~ 80 (82)
T cd03075 2 TLGYWDIRGLAQPIRLLLEYTGEKYEEKRYELGDAPDYDRSQWLNEKFKLGLDFPNLPYYID-GDVKLTQSNAILRYIAR 80 (82)
T ss_pred EEEEeCCccccHHHHHHHHHcCCCcEEEEeccCCccccchHhhhccchhcCCcCCCCCEEEE-CCEEEeehHHHHHHHhh
Confidence 799999999999999999999999998 55553332212345542 229999999996 78899999999999986
No 73
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.23 E-value=4.2e-11 Score=105.04 Aligned_cols=109 Identities=11% Similarity=0.139 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccC--CCcccCCCCChhhhhHHhhh
Q psy6388 89 EKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLT--RTYLVGDYITLADICNACTL 166 (480)
Q Consensus 89 e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~--~tFLvGe~lTlADI~l~~~L 166 (480)
+||..+.|+.+++ .+.+.....+. . ++..+.+.+.+.+.|+.||++|.+ ++||+|+++|+|||++++.+
T Consensus 2 ~ra~~r~~~~~~~-~~~~~~~~~~~----~----~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~ 72 (124)
T cd03184 2 EKAQQKLLLERFS-KVVSAFYKLLG----A----PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWF 72 (124)
T ss_pred hHHHHHHHHHHHh-hhhHHHHHHHh----c----cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHH
Confidence 6899999999997 45444443332 2 445567888999999999999985 79999999999999999988
Q ss_pred HHHHHhhCC---ccccCCCccHHHHHHHHhcChhHHHHhhhhh
Q psy6388 167 LQVYQHAMD---LTFRKPYVNVNRWFTTIVNQPEFKKIVGEVK 206 (480)
Q Consensus 167 ~~~~~~~l~---~~~r~~~PnL~RW~~ti~n~P~~k~v~~~~~ 206 (480)
.++...... ......+|+|.+|+++|.++|.++.++.+.+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~p~l~~w~~r~~~~p~v~~~~~~~~ 115 (124)
T cd03184 73 ERLEALKLLLGYEFPLDRFPKLKKWMDAMKEDPAVQAFYTDTE 115 (124)
T ss_pred HHHHHHHhhccccCCcccChHHHHHHHHhccChHHHHHhCCHH
Confidence 776432111 1125789999999999999999999987643
No 74
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.20 E-value=1e-10 Score=102.27 Aligned_cols=104 Identities=9% Similarity=0.175 Sum_probs=73.9
Q ss_pred CHHHHHHHHHHHHHHhhhhhhHHHH-hhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHcc---CCCcccCCCCChhhhh
Q psy6388 86 TEAEKSKIFDYVCFAQDELLPNACR-WVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLL---TRTYLVGDYITLADIC 161 (480)
Q Consensus 86 t~~e~A~V~qwl~f~~~~l~~~~~~-~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~---~~tFLvGe~lTlADI~ 161 (480)
++.+||+|+||+.|.. .+.. ++.|.++.. ..+.+.+.++.||++|. +++|++| ++|+|||+
T Consensus 1 d~~~ra~~~~~~~~~~-----~~~~~~~~~~~~~~---------~~~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~ 65 (120)
T cd03203 1 DPAKREFADELLAYTD-----AFTKALYSSLIKGD---------PSAEAAAALDYIENALSKFDDGPFFLG-QFSLVDIA 65 (120)
T ss_pred CHHHHHHHHHHHHHHH-----HHHHHHHHHHhcCC---------chHHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHH
Confidence 4678999999999822 2222 223333221 12244667788888886 4799999 99999999
Q ss_pred HHhhhHHHHH---hhCCccccCCCccHHHHHHHHhcChhHHHHhhh
Q psy6388 162 NACTLLQVYQ---HAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGE 204 (480)
Q Consensus 162 l~~~L~~~~~---~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~ 204 (480)
+++.+.++.. ...+......+|+|.+|+++|.++|+++.+..+
T Consensus 66 l~~~~~~~~~~~~~~~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~~ 111 (120)
T cd03203 66 YVPFIERFQIFLSELFNYDITEGRPNLAAWIEEMNKIEAYTQTKQD 111 (120)
T ss_pred HHHHHHHHHHHHHHhcCccccccCcHHHHHHHHHhcchHHHhHcCC
Confidence 9999876532 112222346899999999999999999998765
No 75
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.19 E-value=1.3e-10 Score=102.26 Aligned_cols=119 Identities=16% Similarity=0.153 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccC---CCcccCCCCChhhhhHHh
Q psy6388 88 AEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLT---RTYLVGDYITLADICNAC 164 (480)
Q Consensus 88 ~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~---~tFLvGe~lTlADI~l~~ 164 (480)
.|++.|++.++.+ +++.......+++ + .....+...+.+.+.|..||++|.+ ++||+|+++|+|||++++
T Consensus 2 ~e~~~vd~~~~~~-~d~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~ 74 (126)
T cd03210 2 KEAALIDMVNDGV-EDLRLKYVRMIYQ-----N-YEAGKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFD 74 (126)
T ss_pred hHHHHHHHHHHHH-HHHHHHHHHHhcC-----c-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHH
Confidence 3677888877644 4565555444332 1 1334456777889999999999974 589999999999999999
Q ss_pred hhHHHHHhhCCccccCCCccHHHHHHHHhcChhHHHHhhhhhhhhhhcchh
Q psy6388 165 TLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGEVKLCEKQVNEA 215 (480)
Q Consensus 165 ~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~~~~~ek~f~~~ 215 (480)
.+.++... .......||+|.+|+++|.++|.+++++..-.....+++++
T Consensus 75 ~~~~~~~~--~~~~~~~~P~l~~~~~rv~~~p~v~~~~~~~~~~~~~~~~~ 123 (126)
T cd03210 75 LLDIHLVL--APGCLDAFPLLKAFVERLSARPKLKAYLESDAFKNRPINGN 123 (126)
T ss_pred HHHHHHHh--ChHhhhcChHHHHHHHHHHhCcHHHHHHhCcCCCCCCCCCC
Confidence 88776421 12235789999999999999999999998877666555444
No 76
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.18 E-value=1.2e-10 Score=100.87 Aligned_cols=109 Identities=12% Similarity=0.096 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHhhhh-h--cccCCCChHhHHHHHHHHHHHHHHHHHHcc-CCCcccCCCCChhhhhH
Q psy6388 87 EAEKSKIFDYVCFAQDELLPNACRWVFP-I--LEIYPYNKQTVDSAKDGLKRNLAKLDKHLL-TRTYLVGDYITLADICN 162 (480)
Q Consensus 87 ~~e~A~V~qwl~f~~~~l~~~~~~~~~p-~--~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~-~~tFLvGe~lTlADI~l 162 (480)
+.+++++++|+.|+.+++.+.. ...| . +.. +......+.+...+.+.+..+|.+|. +++||+| .+|+||+++
T Consensus 1 ~~~ra~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l 76 (114)
T cd03195 1 PRQRARARQVQAWLRSDLLPIR--VERSTEVVFAG-AKAEPLSEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDL 76 (114)
T ss_pred CHhhHHHHHHHHHHHhhHHHHH--HhCCccceecC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHH
Confidence 3579999999999999998762 2222 1 111 11123456778888999999999995 5589999 599999999
Q ss_pred HhhhHHHHHhhCCccccCCCccHHHHHHHHhcChhHHHHhhh
Q psy6388 163 ACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGE 204 (480)
Q Consensus 163 ~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~ 204 (480)
++.+.++....++. . |++.+|+++|.++|.|+.+++.
T Consensus 77 ~~~~~~~~~~g~~l---~--p~l~ay~~r~~~rPa~~~~~~~ 113 (114)
T cd03195 77 ALMLNRLVLNGDPV---P--ERLRDYARRQWQRPSVQAWLAL 113 (114)
T ss_pred HHHHHHHHHcCCCC---C--HHHHHHHHHHHCCHHHHHHHhc
Confidence 99999886655543 2 9999999999999999998753
No 77
>KOG2903|consensus
Probab=99.17 E-value=1e-10 Score=112.33 Aligned_cols=190 Identities=18% Similarity=0.225 Sum_probs=136.5
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCC-CCCCChhhhh------------------------------hCC
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFG-KSNKNADFVS------------------------------KFS 52 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~-~~~~~~efl~------------------------------~nP 52 (480)
.+.||..-.||+++|++++.+++||+--+.+..... .+++...|+. ..|
T Consensus 37 ryhLYvslaCPWAhRtLi~r~LKGL~~~i~~s~v~~~~d~~gW~F~~~~~~~nDs~~l~~~~d~~~g~k~l~elY~~~~p 116 (319)
T KOG2903|consen 37 RYHLYVSLACPWAHRTLIVRALKGLEPAIGVSVVHWHLDDKGWRFLDEHIIINDSERLGVTPDPLNGAKRLRELYYIASP 116 (319)
T ss_pred eEEEEEeccCcHHHHHHHHHHHcCccccceeEEeccccCCCcccCCCcccCCCchhcccCCCcccccchhHHHHHhhcCC
Confidence 467999889999999999999999965441111111 1122222222 112
Q ss_pred C--C--cccEEEECC--CceeeCHHHHHHHHhc-------------CCCCCCCHHHHHHHHHHHHHHhhhhhhHHHHhhh
Q psy6388 53 S--P--KVPAFESSD--GTILTSSSAITYFVAN-------------EQLKGKTEAEKSKIFDYVCFAQDELLPNACRWVF 113 (480)
Q Consensus 53 ~--g--kVPvL~~~d--G~~L~ES~AIa~YL~~-------------~~Llg~t~~e~A~V~qwl~f~~~~l~~~~~~~~~ 113 (480)
. | +||||-+.. ..+-.||..|++.+.+ -.|+| +.-+++|+.|.++....+...+...
T Consensus 117 ~Y~grfTVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P--~~L~~~Ide~N~wvy~~INNGVYk~-- 192 (319)
T KOG2903|consen 117 NYTGRFTVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYP--SSLRAQIDETNSWVYDKINNGVYKC-- 192 (319)
T ss_pred CCCceEEEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCC--HHHHHHHhhhhceecccccCceeee--
Confidence 1 2 699998643 3456799999999983 25777 5678999999988776665443321
Q ss_pred hhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCC--cccCCCCChhhhhHHhhhHHHHH---hhC--C-ccccCCCccH
Q psy6388 114 PILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRT--YLVGDYITLADICNACTLLQVYQ---HAM--D-LTFRKPYVNV 185 (480)
Q Consensus 114 p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~t--FLvGe~lTlADI~l~~~L~~~~~---~~l--~-~~~r~~~PnL 185 (480)
....+.+..+.+...+-+.|+.+|.+|+.+- |++|+++|.|||-+++++.+.-. +.+ . ...|..||+|
T Consensus 193 ----GFA~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l 268 (319)
T KOG2903|consen 193 ----GFAEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNL 268 (319)
T ss_pred ----ccccccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHH
Confidence 1245677888999999999999999999876 99999999999999999887521 111 1 1247799999
Q ss_pred HHHHHHHhc-ChhHHHH
Q psy6388 186 NRWFTTIVN-QPEFKKI 201 (480)
Q Consensus 186 ~RW~~ti~n-~P~~k~v 201 (480)
.-|...+-. .|.|...
T Consensus 269 ~~~lk~iY~~~~~~~~T 285 (319)
T KOG2903|consen 269 HNWLKNIYWNIPGFSST 285 (319)
T ss_pred HHHHHHHHhhccchhhc
Confidence 999999977 7888764
No 78
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=99.15 E-value=1.2e-10 Score=94.35 Aligned_cols=67 Identities=19% Similarity=0.156 Sum_probs=55.2
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhh-----CCCCcccEEEECCCceeeCHHHHHHHHh
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSK-----FSSPKVPAFESSDGTILTSSSAITYFVA 78 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~-----nP~gkVPvL~~~dG~~L~ES~AIa~YL~ 78 (480)
++||+++.++++++++++++++|++++. .++. .++|.+. .|.|+||+|++ ||.+|+||.||++||+
T Consensus 2 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~v~~-------~~~~~~~~~~~~~~~g~vP~L~~-~g~~l~ES~AI~~YL~ 73 (79)
T cd03077 2 PVLHYFNGRGRMESIRWLLAAAGVEFEEKFIES-------AEDLEKLKKDGSLMFQQVPMVEI-DGMKLVQTRAILNYIA 73 (79)
T ss_pred CEEEEeCCCChHHHHHHHHHHcCCCcEEEEecc-------HHHHHhhccccCCCCCCCCEEEE-CCEEEeeHHHHHHHHH
Confidence 5899999999999999999999999998 3332 1233322 36899999996 7789999999999998
Q ss_pred c
Q psy6388 79 N 79 (480)
Q Consensus 79 ~ 79 (480)
+
T Consensus 74 ~ 74 (79)
T cd03077 74 G 74 (79)
T ss_pred H
Confidence 7
No 79
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.15 E-value=1e-10 Score=101.04 Aligned_cols=79 Identities=24% Similarity=0.368 Sum_probs=67.9
Q ss_pred CCChHhHHHHHHHHHHHHHHHHHHccCC----------CcccCCCCChhhhhHHhhhHHHHHhhCCccc--cCCCccHHH
Q psy6388 120 PYNKQTVDSAKDGLKRNLAKLDKHLLTR----------TYLVGDYITLADICNACTLLQVYQHAMDLTF--RKPYVNVNR 187 (480)
Q Consensus 120 ~~nk~~~~~a~~~l~~~L~~Le~~L~~~----------tFLvGe~lTlADI~l~~~L~~~~~~~l~~~~--r~~~PnL~R 187 (480)
+.|...++.....+.+.|+.||.+|.++ +||+|+++|+|||++++.+.++....++... +..||+|.+
T Consensus 21 ~~~~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~P~l~~ 100 (111)
T cd03204 21 HDNVEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLGLSRRYWGNGKRPNLEA 100 (111)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcCccccccccccChHHHH
Confidence 6788888999999999999999999865 3999999999999999999988654444321 468999999
Q ss_pred HHHHHhcChhH
Q psy6388 188 WFTTIVNQPEF 198 (480)
Q Consensus 188 W~~ti~n~P~~ 198 (480)
|+++|.++|+|
T Consensus 101 w~~rv~aRpsf 111 (111)
T cd03204 101 YFERVLQRESF 111 (111)
T ss_pred HHHHHHcCCCC
Confidence 99999999975
No 80
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.14 E-value=1.1e-10 Score=97.16 Aligned_cols=63 Identities=14% Similarity=0.199 Sum_probs=56.4
Q ss_pred CCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc
Q psy6388 12 DNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 12 ~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~ 79 (480)
.||+|+++|++++++||+|++ .++. .+++++|+++||.|+||+|++ +|..|+||.+|++||++
T Consensus 21 ~cpf~~rvrl~L~eKgi~ye~~~vd~----~~~p~~~~~~nP~g~vPvL~~-~~~~i~eS~~I~eYLde 84 (91)
T cd03061 21 NCPFCQRLFMVLWLKGVVFNVTTVDM----KRKPEDLKDLAPGTQPPFLLY-NGEVKTDNNKIEEFLEE 84 (91)
T ss_pred CChhHHHHHHHHHHCCCceEEEEeCC----CCCCHHHHHhCCCCCCCEEEE-CCEEecCHHHHHHHHHH
Confidence 689999999999999999998 4444 256789999999999999996 67899999999999987
No 81
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.12 E-value=1.6e-10 Score=95.74 Aligned_cols=74 Identities=27% Similarity=0.467 Sum_probs=64.0
Q ss_pred ChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcCh
Q psy6388 122 NKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQP 196 (480)
Q Consensus 122 nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P 196 (480)
.....+.....+.+.|..+|++|++++||+|+++|+|||++++.+.++........ .++||+|.+|+++|.++|
T Consensus 22 ~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~~~-~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 22 DEEMVEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLGPDFL-FEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHTTTTT-HTTSHHHHHHHHHHHTSH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhCCCcc-cccCHHHHHHHHHHHcCC
Confidence 44567888999999999999999999999999999999999999998876544432 489999999999999998
No 82
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.11 E-value=2e-10 Score=91.55 Aligned_cols=66 Identities=14% Similarity=0.105 Sum_probs=55.8
Q ss_pred cCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHh
Q psy6388 10 WPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVA 78 (480)
Q Consensus 10 ~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~ 78 (480)
...++++++++++++++|++++. .++... ....++|.+.+|.|+||+|++ +|..|+||.||++||+
T Consensus 7 ~~~s~~s~~v~~~L~~~gl~~e~~~v~~~~--~~~~~~~~~~nP~g~vP~L~~-~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 7 KNYSSWSLRPWLLLKAAGIPFEEILVPLYT--PDTRARILEFSPTGKVPVLVD-GGIVVWDSLAICEYLA 73 (73)
T ss_pred CCCCHHHHHHHHHHHHcCCCCEEEEeCCCC--ccccHHHHhhCCCCcCCEEEE-CCEEEEcHHHHHHHhC
Confidence 45789999999999999999998 444322 235689999999999999996 6789999999999985
No 83
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.11 E-value=4.1e-11 Score=100.92 Aligned_cols=96 Identities=28% Similarity=0.341 Sum_probs=67.3
Q ss_pred CHHHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCC--cccCCCCChhhhhHH
Q psy6388 86 TEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRT--YLVGDYITLADICNA 163 (480)
Q Consensus 86 t~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~t--FLvGe~lTlADI~l~ 163 (480)
++.++++|++|++|.. .+..............+...+++.+.|..||++|+.++ ||+|+++|+||++++
T Consensus 2 ~~~~~a~i~~W~~f~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~ 72 (99)
T PF14497_consen 2 DPYWRALIDRWLDFSV---------AFRRRKARLEKDEASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVF 72 (99)
T ss_dssp --TTHHHHHHHHH-GH---------CCHCCHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHH
T ss_pred chHHHHHHHHHHhccc---------hhhhHHHHHHHhhhhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHH
Confidence 4567899999999661 11111111112234567788999999999999999888 999999999999999
Q ss_pred hhhHHHHHhhCCccccCCCccHHHHHHHHhc
Q psy6388 164 CTLLQVYQHAMDLTFRKPYVNVNRWFTTIVN 194 (480)
Q Consensus 164 ~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n 194 (480)
+.|..... . ...+.||||.+|+++|.+
T Consensus 73 ~~l~~~~~---~-~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 73 GFLASLRW---A-DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp HHHHHHHC---C-HHTTTCHHHHHHHHHHHT
T ss_pred HHHHHHhh---c-ccccccHHHHHHHHhhcC
Confidence 99866642 1 122689999999999964
No 84
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=99.10 E-value=3.4e-10 Score=90.72 Aligned_cols=70 Identities=20% Similarity=0.199 Sum_probs=57.8
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEEC---CCceeeCHHHHHHHHhc
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESS---DGTILTSSSAITYFVAN 79 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~---dG~~L~ES~AIa~YL~~ 79 (480)
++||+++.||+|+++++++.++|++|+. +..... ..++ ++.+|.++||+|+.+ +|.+|+||.+|++||++
T Consensus 2 i~Ly~~~~~p~c~kv~~~L~~~gi~y~~-~~~~~~---~~~~-~~~~~~~~vP~l~~~~~~~~~~l~eS~~I~~yL~~ 74 (77)
T cd03040 2 ITLYQYKTCPFCCKVRAFLDYHGIPYEV-VEVNPV---SRKE-IKWSSYKKVPILRVESGGDGQQLVDSSVIISTLKT 74 (77)
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCceEE-EECCch---hHHH-HHHhCCCccCEEEECCCCCccEEEcHHHHHHHHHH
Confidence 6999999999999999999999999998 222111 1223 467999999999976 47899999999999986
No 85
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.09 E-value=5.2e-10 Score=99.80 Aligned_cols=99 Identities=22% Similarity=0.284 Sum_probs=75.3
Q ss_pred HhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccC----------------CCcccCCCCChhhhhHH
Q psy6388 100 AQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLT----------------RTYLVGDYITLADICNA 163 (480)
Q Consensus 100 ~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~----------------~tFLvGe~lTlADI~l~ 163 (480)
..+.|++.+..++. ..+++..+...+.+.+.|+.||++|.+ +.||+|+++|+|||.++
T Consensus 7 ~~~~~f~~~~~~~~------~~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~ 80 (134)
T cd03198 7 AGEDIFAKFSAYIK------NSNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLL 80 (134)
T ss_pred hHHHHHHHHHHHHc------CCChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHH
Confidence 34455665555433 234456677888999999999999987 67999999999999999
Q ss_pred hhhHHHHHh---hCCccccCCCccHHHHHHHHhcChhHHHHhhh
Q psy6388 164 CTLLQVYQH---AMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGE 204 (480)
Q Consensus 164 ~~L~~~~~~---~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~ 204 (480)
+.+.++... ..+......+|+|.+|+++|.++|+|+.++..
T Consensus 81 p~L~~~~~~~~~~~g~~i~~~~P~L~aw~~ri~aRPsfk~t~~~ 124 (134)
T cd03198 81 PKLHIVKVVAKKYRNFEIPADLTGLWRYLKNAYQREEFTNTCPA 124 (134)
T ss_pred HHHHHHHHHHHhhcCCCccccCHHHHHHHHHHHCCHHHHHHcCC
Confidence 998866321 11222236899999999999999999998754
No 86
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.09 E-value=2.4e-10 Score=94.51 Aligned_cols=99 Identities=26% Similarity=0.362 Sum_probs=78.1
Q ss_pred HHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHHHHHhh
Q psy6388 94 FDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQVYQHA 173 (480)
Q Consensus 94 ~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~~ 173 (480)
++|++|....+.+.....+.+.....+..+...+...+.+.+.++.||++|.++.|++|+++|+|||++++.+.++....
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~ 81 (100)
T cd00299 2 RAWEEWADTTLEPAARRLLLLAFVGPEVDEAALEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLG 81 (100)
T ss_pred hHHHHHHHhhcCCcccceeeeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhh
Confidence 67899998888777665554433222345677888899999999999999999999999999999999999999886543
Q ss_pred CCccccCCCccHHHHHHHH
Q psy6388 174 MDLTFRKPYVNVNRWFTTI 192 (480)
Q Consensus 174 l~~~~r~~~PnL~RW~~ti 192 (480)
........+|++.+|+++|
T Consensus 82 ~~~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 82 PLLGLLDEYPRLAAWYDRL 100 (100)
T ss_pred hhhhhhccCccHHHHHHhC
Confidence 3322357899999999874
No 87
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=99.08 E-value=4.3e-10 Score=86.40 Aligned_cols=69 Identities=29% Similarity=0.487 Sum_probs=57.9
Q ss_pred EEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHh
Q psy6388 6 TLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVA 78 (480)
Q Consensus 6 tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~ 78 (480)
+||+++.||+|++++++++++|++++. .++.. . ....++.+.+|.+++|+|+. +|..++||.+|++||+
T Consensus 2 ~ly~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~--~-~~~~~~~~~~~~~~~P~l~~-~~~~~~es~~I~~yl~ 71 (71)
T cd00570 2 KLYYFPGSPRSLRVRLALEEKGLPYELVPVDLG--E-GEQEEFLALNPLGKVPVLED-GGLVLTESLAILEYLA 71 (71)
T ss_pred EEEeCCCCccHHHHHHHHHHcCCCcEEEEeCCC--C-CCCHHHHhcCCCCCCCEEEE-CCEEEEcHHHHHHHhC
Confidence 899999999999999999999999998 33321 1 12226888999999999997 5789999999999985
No 88
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.07 E-value=3.1e-10 Score=88.88 Aligned_cols=68 Identities=29% Similarity=0.475 Sum_probs=58.0
Q ss_pred HhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHH
Q psy6388 124 QTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTT 191 (480)
Q Consensus 124 ~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~t 191 (480)
...+.+.+.+.+.|+.||++|.+++||+|+++|+|||++++.+.++.....+...+..+|+|.+|+++
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcCcCccccCHHHHHHHhC
Confidence 45678999999999999999999999999999999999999999987654444456899999999986
No 89
>KOG4244|consensus
Probab=99.06 E-value=1.7e-09 Score=104.58 Aligned_cols=178 Identities=17% Similarity=0.226 Sum_probs=127.4
Q ss_pred EEEEcC-------CCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHh
Q psy6388 6 TLYSWP-------DNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVA 78 (480)
Q Consensus 6 tLY~~~-------~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~ 78 (480)
-||+++ -||+|.++-..+...+||||+ ++.. +...++.|++|-++. +|..+.+|.-|..+|.
T Consensus 47 YLyQF~R~~~~PnLSPfClKvEt~lR~~~IpYE~-~~~~---------~~~rSr~G~lPFIEL-NGe~iaDS~~I~~~L~ 115 (281)
T KOG4244|consen 47 YLYQFPRTKTCPNLSPFCLKVETFLRAYDIPYEI-VDCS---------LKRRSRNGTLPFIEL-NGEHIADSDLIEDRLR 115 (281)
T ss_pred EEEeccccCCCCCCChHHHHHHHHHHHhCCCcee-cccc---------ceeeccCCCcceEEe-CCeeccccHHHHHHHH
Confidence 467665 579999999999999999998 3321 113567899999986 8889999999999999
Q ss_pred cC-CCCC-CCHHHHHHHHHHHHHHhhhhhhHHHHh-------h-----------------hhhcccCCCChHh-------
Q psy6388 79 NE-QLKG-KTEAEKSKIFDYVCFAQDELLPNACRW-------V-----------------FPILEIYPYNKQT------- 125 (480)
Q Consensus 79 ~~-~Llg-~t~~e~A~V~qwl~f~~~~l~~~~~~~-------~-----------------~p~~g~~~~nk~~------- 125 (480)
.+ ++-- -+++++|+.......+++.+.-.+..+ + .|.++..-+.++.
T Consensus 116 ~hf~~~~~L~~e~~a~s~Al~rm~dnhL~~~l~y~k~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~f~~kv~~r~~g~ 195 (281)
T KOG4244|consen 116 KHFKIPDDLSAEQRAQSRALSRMADNHLFWILLYYKGADDAWLNTDRKLIGLPGFLFPLLLPLFWKAIFGKKVYKRSTGA 195 (281)
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHHHhhcc
Confidence 82 1111 357888988888888877665443321 1 1222111111111
Q ss_pred -----HHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHHHHHhhCCcc----ccCCCccHHHHHHHHhcC
Q psy6388 126 -----VDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLT----FRKPYVNVNRWFTTIVNQ 195 (480)
Q Consensus 126 -----~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~~l~~~----~r~~~PnL~RW~~ti~n~ 195 (480)
.++..+-+.+-|..+...|.++.||.|+++|-+|.++++.|..++- .+... ....+|||..|++||.+.
T Consensus 196 IG~f~~~Ei~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~Y-P~~~~i~d~le~d~p~l~eYceRIr~~ 273 (281)
T KOG4244|consen 196 IGDFESAEIDELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYY-PFRSHISDLLEGDFPNLLEYCERIRKE 273 (281)
T ss_pred ccCcCHHHHHHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheec-cCCCcHHHHHhhhchHHHHHHHHHHHH
Confidence 1234556688899999999999999999999999999999988753 22211 246799999999998653
No 90
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=99.03 E-value=7.6e-10 Score=90.43 Aligned_cols=67 Identities=13% Similarity=0.160 Sum_probs=53.3
Q ss_pred CCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc
Q psy6388 11 PDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 11 ~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~ 79 (480)
+.||+|+++++++.++|++++. .++.... ....+++ +.+|.|+||+|++++|..|+||.||++||++
T Consensus 14 ~~Sp~~~kv~~~L~~~~i~~~~~~~~~~~~-~~~~~~~-~~~p~~~vP~L~~~~~~~l~eS~aI~~yL~~ 81 (84)
T cd03038 14 AFSPNVWKTRLALNHKGLEYKTVPVEFPDI-PPILGEL-TSGGFYTVPVIVDGSGEVIGDSFAIAEYLEE 81 (84)
T ss_pred CcCChhHHHHHHHHhCCCCCeEEEecCCCc-ccccccc-cCCCCceeCeEEECCCCEEeCHHHHHHHHHH
Confidence 4689999999999999999998 4443222 2223344 7899999999997437899999999999986
No 91
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=99.01 E-value=1.1e-09 Score=87.60 Aligned_cols=64 Identities=17% Similarity=0.139 Sum_probs=54.5
Q ss_pred eEEEEcC-------CCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHH
Q psy6388 5 GTLYSWP-------DNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFV 77 (480)
Q Consensus 5 ~tLY~~~-------~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL 77 (480)
++||+++ .||+|++++++++++|++++. +... +.+.+|.|+||+|++ +|..|+||.+|++||
T Consensus 2 ~~L~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~-~~~~---------~~~~~p~g~vPvl~~-~g~~l~eS~~I~~yL 70 (75)
T cd03080 2 ITLYQFPRAFGVPSLSPFCLKVETFLRMAGIPYEN-KFGG---------LAKRSPKGKLPFIEL-NGEKIADSELIIDHL 70 (75)
T ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHCCCCcEE-eecC---------cccCCCCCCCCEEEE-CCEEEcCHHHHHHHH
Confidence 5999988 579999999999999999997 2221 125789999999996 688999999999999
Q ss_pred hc
Q psy6388 78 AN 79 (480)
Q Consensus 78 ~~ 79 (480)
++
T Consensus 71 ~~ 72 (75)
T cd03080 71 EE 72 (75)
T ss_pred HH
Confidence 86
No 92
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.01 E-value=2.1e-09 Score=96.30 Aligned_cols=111 Identities=23% Similarity=0.260 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChH-h-HHHHHHHHHHHHHHHHHHcc--CCCcccCCCCChhhhhHH
Q psy6388 88 AEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQ-T-VDSAKDGLKRNLAKLDKHLL--TRTYLVGDYITLADICNA 163 (480)
Q Consensus 88 ~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~-~-~~~a~~~l~~~L~~Le~~L~--~~tFLvGe~lTlADI~l~ 163 (480)
.+++.|++.++.+ .++...+..+++ ..+..+. . .....+.+.+.|..||++|. +++||+|+++|+|||+++
T Consensus 2 ~e~a~iD~i~~~v-~D~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~ 76 (137)
T cd03208 2 KERALIDMYVEGT-ADLMEMILMLPF----LPPEEKEAKLALIKEKAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLL 76 (137)
T ss_pred hHHHHHHHHHHHH-HHHHHHHHHHcc----CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHH
Confidence 3678888887755 344443333322 1122222 1 12233466799999999998 678999999999999999
Q ss_pred hhhHHHHHhhCCccccCCCccHHHHHHHHhcChhHHHHhhhh
Q psy6388 164 CTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGEV 205 (480)
Q Consensus 164 ~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~~ 205 (480)
+.+.++... .......||+|.+|+++|.++|.+++++..-
T Consensus 77 ~~l~~~~~~--~~~~l~~~P~l~~~~~rv~~~P~vk~~~~~~ 116 (137)
T cd03208 77 EAILMVEEL--DPSLLSDFPLLQAFKTRISNLPTIKKFLQPG 116 (137)
T ss_pred HHHHHHHHh--chhhhccChHHHHHHHHHHcCHHHHHHHhcC
Confidence 999876432 2233578999999999999999999998763
No 93
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.00 E-value=2.9e-09 Score=97.13 Aligned_cols=181 Identities=13% Similarity=0.169 Sum_probs=119.0
Q ss_pred EEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc---CC
Q psy6388 6 TLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN---EQ 81 (480)
Q Consensus 6 tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~---~~ 81 (480)
+||.|..||+|.|+|+++.++|+|++. ..... .+ .++ .++--..+||+|+-+||..+.||..|++|+++ ..
T Consensus 2 kLYIYdHCPfcvrarmi~Gl~nipve~~vL~nD--De-~Tp--~rmiG~KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~~ 76 (215)
T COG2999 2 KLYIYDHCPFCVRARMIFGLKNIPVELHVLLND--DE-ETP--IRMIGQKQVPILQKEDGRAMPESLDIVHYVDELDGKP 76 (215)
T ss_pred ceeEeccChHHHHHHHHhhccCCChhhheeccC--cc-cCh--hhhhcccccceEEccccccchhhhHHHHHHHHhcCch
Confidence 899999999999999999999999998 22221 11 111 23334568999999999999999999999998 23
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhh----hhHHHHhhhhhccc-----------------CCCChHhHHHHHHHHHHHHHHH
Q psy6388 82 LKGKTEAEKSKIFDYVCFAQDEL----LPNACRWVFPILEI-----------------YPYNKQTVDSAKDGLKRNLAKL 140 (480)
Q Consensus 82 Llg~t~~e~A~V~qwl~f~~~~l----~~~~~~~~~p~~g~-----------------~~~nk~~~~~a~~~l~~~L~~L 140 (480)
|+- ..-+-.|..|+.-+...+ .|-+...-+|-+.. ....=........++...|+.|
T Consensus 77 ~lt--~~~~pai~~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~~yf~~KKe~s~g~F~~~l~~t~~~~~~i~~dl~~l 154 (215)
T COG2999 77 LLT--GKVRPAIEAWLRKVNGYLNKLLLPRFAKSALPEFATPSARKYFTDKKEASEGSFESLLNHTAQYLKRIQADLRAL 154 (215)
T ss_pred hhc--cCcCHHHHHHHHHhcchHhhhhhhhHhhcCCccccCHHHHHHHHhhhhhccccHHHHHhchHHHHHHHHHHHHHH
Confidence 322 223455777877554432 22222111111110 0000112345567788888889
Q ss_pred HHHccCCCcccCCCCChhhhhHHhhhHHHHHhhCCccccCCCc-cHHHHHHHHhcChhHH
Q psy6388 141 DKHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYV-NVNRWFTTIVNQPEFK 199 (480)
Q Consensus 141 e~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~~l~~~~r~~~P-nL~RW~~ti~n~P~~k 199 (480)
+..+.+.+=+ ...+++-||.+++.|..+. .+-+- ++| .|..|.++|.++..+.
T Consensus 155 ~~Li~~~s~~-n~~l~~ddi~vFplLRnlt-~v~gi----~wps~v~dy~~~msektqV~ 208 (215)
T COG2999 155 DKLIVGPSAV-NGELSEDDILVFPLLRNLT-LVAGI----QWPSRVADYRDNMSEKTQVN 208 (215)
T ss_pred HHHhcCcchh-ccccchhhhhhhHHhccce-ecccC----CCcHHHHHHHHHHHHhhCcc
Confidence 9888877733 3459999999999998763 23332 234 7899999998776554
No 94
>KOG3029|consensus
Probab=98.99 E-value=4e-09 Score=102.40 Aligned_cols=183 Identities=15% Similarity=0.162 Sum_probs=114.7
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc---
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN--- 79 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~--- 79 (480)
.++||.+..||+|-+||..+.|.|++|++ +++.....+- +-+-..|||+|.. +|..+.+|.+|+.-|+.
T Consensus 90 ~l~LyQyetCPFCcKVrAFLDyhgisY~VVEVnpV~r~eI------k~SsykKVPil~~-~Geqm~dSsvIIs~laTyLq 162 (370)
T KOG3029|consen 90 DLVLYQYETCPFCCKVRAFLDYHGISYAVVEVNPVLRQEI------KWSSYKKVPILLI-RGEQMVDSSVIISLLATYLQ 162 (370)
T ss_pred eEEEEeeccCchHHHHHHHHhhcCCceEEEEecchhhhhc------cccccccccEEEe-ccceechhHHHHHHHHHHhc
Confidence 47899999999999999999999999998 4444322211 2235679999997 57779999998776632
Q ss_pred ---------CCCCC-----------------------------CCHHHHHHHHHHHHHHhhhhhhHHHHhhh--------
Q psy6388 80 ---------EQLKG-----------------------------KTEAEKSKIFDYVCFAQDELLPNACRWVF-------- 113 (480)
Q Consensus 80 ---------~~Llg-----------------------------~t~~e~A~V~qwl~f~~~~l~~~~~~~~~-------- 113 (480)
-..+| .+.+.+.+-+.|-+|+++.+...+..-++
T Consensus 163 ~~~q~l~eiiq~yPa~~~~ne~GK~v~~~~NKyflM~~e~d~~~~ke~~~eerkWR~WvDn~lVHLiSPNvYrn~~Esle 242 (370)
T KOG3029|consen 163 DKRQDLGEIIQMYPATSFFNEDGKEVNDILNKYFLMYREHDPGVSKETDEEERKWRSWVDNHLVHLISPNVYRNMGESLE 242 (370)
T ss_pred cCCCCHHHHHHhccccccccccccchhhcchhheeeeeccCCCccccchHHHhHHHHHHhhhhhhhcCcccccChhhHHH
Confidence 01122 11122334456666666554322221111
Q ss_pred -----hhccc----CCCCh----------------------HhHHHHHHHHHHHHHHHHHHc-cCCCcccCCCCChhhhh
Q psy6388 114 -----PILEI----YPYNK----------------------QTVDSAKDGLKRNLAKLDKHL-LTRTYLVGDYITLADIC 161 (480)
Q Consensus 114 -----p~~g~----~~~nk----------------------~~~~~a~~~l~~~L~~Le~~L-~~~tFLvGe~lTlADI~ 161 (480)
...|. .|.-. -.+...++.+.+.++..-+.| .+++||.|.+++|||+.
T Consensus 243 tFewf~q~G~w~~~FpawEr~lavY~GAtAM~lisK~LKkkhni~D~Re~lydA~d~Wvaalgknr~flGG~kPnLaDLs 322 (370)
T KOG3029|consen 243 TFEWFSQAGEWDVHFPAWERDLAVYCGATAMYLISKMLKKKHNISDEREHLYDAADQWVAALGKNRPFLGGKKPNLADLS 322 (370)
T ss_pred HHHHHHHcCCccccCchHHHHHHHHhhHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhCCCCCccCCCCCchhhhh
Confidence 11111 01000 011124566666777666667 67899999999999999
Q ss_pred HHhhhHHHHHhhCCccccCCCccHHHHHHHHhc
Q psy6388 162 NACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVN 194 (480)
Q Consensus 162 l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n 194 (480)
++.+|..+...-.-.. .-...+|..|+-+|.+
T Consensus 323 vfGvl~sm~gc~afkd-~~q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 323 VFGVLRSMEGCQAFKD-CLQNTSIGEWYYRMEA 354 (370)
T ss_pred hhhhhhHhhhhhHHHH-HHhcchHHHHHHHHHH
Confidence 9999998754311111 2356788899988744
No 95
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=98.96 E-value=1.4e-09 Score=91.90 Aligned_cols=100 Identities=21% Similarity=0.233 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccC--CCcccCCCCChhhhhHHhhh
Q psy6388 89 EKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLT--RTYLVGDYITLADICNACTL 166 (480)
Q Consensus 89 e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~--~tFLvGe~lTlADI~l~~~L 166 (480)
+++.|+.|++. .+++.......+++..+ .++.+...+...+.+.+.+..||++|.+ ++|++|+++|+|||++++.+
T Consensus 2 e~~~v~~~~~~-~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~ 79 (104)
T cd03192 2 EAARVDALVDT-IADLRAEFAKYFYEKDG-EEKKEKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVL 79 (104)
T ss_pred hHHHHHHHHHH-HHHHHHHHHHHhhcCch-HHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHH
Confidence 57889999997 56787777777665332 1234667778888999999999999987 89999999999999999999
Q ss_pred HHHHHhhCCccc-cCCCccHHHHHHHH
Q psy6388 167 LQVYQHAMDLTF-RKPYVNVNRWFTTI 192 (480)
Q Consensus 167 ~~~~~~~l~~~~-r~~~PnL~RW~~ti 192 (480)
.++... .+.. ...||+|.+|++++
T Consensus 80 ~~~~~~--~~~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 80 DYLLYL--DPKLLLKKYPKLKALRERV 104 (104)
T ss_pred HHHHhh--CchhhHHhChhHHHHHHhC
Confidence 887433 2222 57899999999874
No 96
>KOG3027|consensus
Probab=98.95 E-value=1.3e-08 Score=94.85 Aligned_cols=175 Identities=21% Similarity=0.321 Sum_probs=132.1
Q ss_pred CCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhcC-CCCC--CCH
Q psy6388 11 PDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVANE-QLKG--KTE 87 (480)
Q Consensus 11 ~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~~-~Llg--~t~ 87 (480)
|.+..|..|...++..++|+.+.. ....|| ++|.|+||.|.. +.+.++|-.+|..++... .-++ -+.
T Consensus 32 ~d~ascLAVqtfLrMcnLPf~v~~-------~~Naef--mSP~G~vPllr~-g~~~~aef~pIV~fVeak~~~l~s~lsE 101 (257)
T KOG3027|consen 32 PDNASCLAVQTFLRMCNLPFNVRQ-------RANAEF--MSPGGKVPLLRI-GKTLFAEFEPIVDFVEAKGVTLTSWLSE 101 (257)
T ss_pred ccchhHHHHHHHHHHcCCCceeee-------cCCccc--cCCCCCCceeee-cchhhhhhhHHHHHHHHhccchhhhhhh
Confidence 467789999999999999999821 112344 589999999997 567899999999999872 2222 456
Q ss_pred HHHHHHHHHHHHHhhhhhhHHH--Hhh------------------hhhcccC---------------CCChHhHHHHHHH
Q psy6388 88 AEKSKIFDYVCFAQDELLPNAC--RWV------------------FPILEIY---------------PYNKQTVDSAKDG 132 (480)
Q Consensus 88 ~e~A~V~qwl~f~~~~l~~~~~--~~~------------------~p~~g~~---------------~~nk~~~~~a~~~ 132 (480)
.++|.++..+++.++-+..+-. .|. +|+.... ..++...+...++
T Consensus 102 ~qkadmra~vslVen~~t~aEl~~s~~de~ty~~vT~~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~~~~~DqVie~ 181 (257)
T KOG3027|consen 102 DQKADMRAYVSLVENLLTTAELYVSWNDEETYDEVTALRYGSVYPWPLSHILPFVKRRKALRELKVYDWDDKTMDQVIEQ 181 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhccCCCCCCcHHHHHHHHHHHHHHHHHhhcCcccccHHHHHHH
Confidence 7899999999988776543221 111 1222222 2334455788899
Q ss_pred HHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHHHHHhhCCcc----ccCCCccHHHHHHHHhcC
Q psy6388 133 LKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLT----FRKPYVNVNRWFTTIVNQ 195 (480)
Q Consensus 133 l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~~l~~~----~r~~~PnL~RW~~ti~n~ 195 (480)
+..+++.|..+|+..+|+.|+++|-+|..+++.+..+.+.-+... ..++|+||..+..||.++
T Consensus 182 vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt~Lpn~ela~~lkkys~LlefcrrIeq~ 248 (257)
T KOG3027|consen 182 VDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTTRLPNMELANILKKYSNLLEFCRRIEQQ 248 (257)
T ss_pred HHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhhcCCcHHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999887655432 357899999999998654
No 97
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=98.93 E-value=5e-09 Score=91.98 Aligned_cols=78 Identities=19% Similarity=0.347 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHHHccC-CCcccCCCCChhhhhHHhhhHHHHHh-h--CCccccCCCccHHHHHHHHhcChhHHHHh
Q psy6388 127 DSAKDGLKRNLAKLDKHLLT-RTYLVGDYITLADICNACTLLQVYQH-A--MDLTFRKPYVNVNRWFTTIVNQPEFKKIV 202 (480)
Q Consensus 127 ~~a~~~l~~~L~~Le~~L~~-~tFLvGe~lTlADI~l~~~L~~~~~~-~--l~~~~r~~~PnL~RW~~ti~n~P~~k~v~ 202 (480)
+.+.+.+.+.|..||.+|.+ ++||+|+++|+|||++++.+.++... . .+......+|+|.||+++|.++|.|+..+
T Consensus 29 ~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~rps~~~t~ 108 (121)
T cd03201 29 DGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFSRESFVKTK 108 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHCCchhhhcC
Confidence 55677899999999999984 79999999999999999987665321 1 11112378999999999999999999987
Q ss_pred hh
Q psy6388 203 GE 204 (480)
Q Consensus 203 ~~ 204 (480)
..
T Consensus 109 ~~ 110 (121)
T cd03201 109 AE 110 (121)
T ss_pred CC
Confidence 64
No 98
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.91 E-value=1.1e-08 Score=88.72 Aligned_cols=104 Identities=12% Similarity=0.099 Sum_probs=66.1
Q ss_pred HHHHHHHhhhhhhHHHHhhhhhcccC---CCChHhHHHHHHHHHHHHHHHHHHc---cCCCcccCCCCChhhhhHHhhhH
Q psy6388 94 FDYVCFAQDELLPNACRWVFPILEIY---PYNKQTVDSAKDGLKRNLAKLDKHL---LTRTYLVGDYITLADICNACTLL 167 (480)
Q Consensus 94 ~qwl~f~~~~l~~~~~~~~~p~~g~~---~~nk~~~~~a~~~l~~~L~~Le~~L---~~~tFLvGe~lTlADI~l~~~L~ 167 (480)
+.|..+..+++...+...+.+..... ...+...+...+.+.+.+..+|.+| .+++||+|+ +|+|||.+++.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~ 82 (114)
T cd03194 4 RAWARSAAAEMHSGFAALRSECPMNLRARVPGFELSEAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVT 82 (114)
T ss_pred hHHHHHHHHHHHCcHHHHHHhCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHH
Confidence 34444566666655554444322110 0111222334444555555555544 577899999 9999999999988
Q ss_pred HHHHhhCCccccCCCccHHHHHHHHhcChhHHHHhh
Q psy6388 168 QVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVG 203 (480)
Q Consensus 168 ~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~ 203 (480)
++....++ ..|+|.+|+++|.++|.+++.+.
T Consensus 83 ~~~~~~~~-----~~P~l~~~~~rv~~rPsv~~~~~ 113 (114)
T cd03194 83 RFRTYGLP-----LSPAAQAYVDALLAHPAMQEWIA 113 (114)
T ss_pred HHHHcCCC-----CCHHHHHHHHHHHCCHHHHHHHh
Confidence 87543222 23999999999999999999864
No 99
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.85 E-value=9.5e-09 Score=86.25 Aligned_cols=96 Identities=19% Similarity=0.234 Sum_probs=71.0
Q ss_pred HHHHHHHhhhhhhHHHHhhh-hhcccCCCChHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHHHHHh
Q psy6388 94 FDYVCFAQDELLPNACRWVF-PILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQVYQH 172 (480)
Q Consensus 94 ~qwl~f~~~~l~~~~~~~~~-p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~ 172 (480)
.+|.++..+-+...+..... ........++...+.....+.+.|..||++|++++| +++|+|||++++.+.++...
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~ 78 (98)
T cd03205 2 LRLEALADGILDAAVAIVYERRLRPEEKRSQPWLERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFR 78 (98)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCcHhhhChHHHHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhH
Confidence 56777776666544432222 212223456678889999999999999999999898 99999999999999887543
Q ss_pred hCCccccCCCccHHHHHHHH
Q psy6388 173 AMDLTFRKPYVNVNRWFTTI 192 (480)
Q Consensus 173 ~l~~~~r~~~PnL~RW~~ti 192 (480)
..+...+..||+|.+|+++|
T Consensus 79 ~~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 79 HPDLDWRAAHPALAAWYARF 98 (98)
T ss_pred ccCcchhhhChHHHHHHHhC
Confidence 33433457899999999875
No 100
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=98.82 E-value=1.3e-08 Score=80.50 Aligned_cols=63 Identities=14% Similarity=0.195 Sum_probs=52.7
Q ss_pred EEEEcC-------CCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHh
Q psy6388 6 TLYSWP-------DNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVA 78 (480)
Q Consensus 6 tLY~~~-------~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~ 78 (480)
+||.++ .||+|++++++++++|++|+. +.... ..++|.|+||+|+. +|..++||.+|++||+
T Consensus 2 ~L~~~~~~~~~~s~sp~~~~v~~~L~~~~i~~~~-~~~~~---------~~~~p~g~vP~l~~-~g~~l~es~~I~~yL~ 70 (72)
T cd03054 2 ELYQWGRAFGLPSLSPECLKVETYLRMAGIPYEV-VFSSN---------PWRSPTGKLPFLEL-NGEKIADSEKIIEYLK 70 (72)
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHhCCCceEE-EecCC---------cccCCCcccCEEEE-CCEEEcCHHHHHHHHh
Confidence 688776 889999999999999999998 22211 01789999999996 6789999999999997
Q ss_pred c
Q psy6388 79 N 79 (480)
Q Consensus 79 ~ 79 (480)
+
T Consensus 71 ~ 71 (72)
T cd03054 71 K 71 (72)
T ss_pred h
Confidence 5
No 101
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=98.78 E-value=2.2e-08 Score=82.21 Aligned_cols=65 Identities=20% Similarity=0.200 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHHHHHhhCCc----cccCCCccHHHHHHHH
Q psy6388 128 SAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQVYQHAMDL----TFRKPYVNVNRWFTTI 192 (480)
Q Consensus 128 ~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~~l~~----~~r~~~PnL~RW~~ti 192 (480)
.+.+++.+.++.||++|++++|++|+++|+|||++++.+.++....+.. .....+|+|.+|+++|
T Consensus 19 ~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~ 87 (88)
T cd03193 19 EIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERI 87 (88)
T ss_pred HHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHh
Confidence 5677899999999999999999999999999999999988875432222 1246799999999987
No 102
>KOG3028|consensus
Probab=98.68 E-value=1.2e-06 Score=87.06 Aligned_cols=173 Identities=16% Similarity=0.173 Sum_probs=127.0
Q ss_pred CCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc--CCC-CCC--C
Q psy6388 12 DNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN--EQL-KGK--T 86 (480)
Q Consensus 12 ~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~--~~L-lg~--t 86 (480)
.++.|..+++.+++++-+.++.+... . ...|.|++|+|++++|..+..-.-|..||.. .++ ++. .
T Consensus 16 id~~sL~~l~y~kl~~~~l~v~~ssN---~-------~~s~sg~LP~l~~~ng~~va~~~~iv~~L~k~~~ky~~d~dl~ 85 (313)
T KOG3028|consen 16 IDPDSLAALIYLKLAGAPLKVVVSSN---P-------WRSPSGKLPYLITDNGTKVAGPVKIVQFLKKNTKKYNLDADLS 85 (313)
T ss_pred cChhHHHHHHHHHHhCCCceeEeecC---C-------CCCCCCCCCeEEecCCceeccHHHHHHHHHHhcccCCcCccHH
Confidence 57899999999999996666522211 1 2458899999999999999999999999976 221 222 2
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHhhh--------------------hhcccCC----------------CChHhHHHHH
Q psy6388 87 EAEKSKIFDYVCFAQDELLPNACRWVF--------------------PILEIYP----------------YNKQTVDSAK 130 (480)
Q Consensus 87 ~~e~A~V~qwl~f~~~~l~~~~~~~~~--------------------p~~g~~~----------------~nk~~~~~a~ 130 (480)
..+.+++..|+++..+.+.+++...++ |+.-..| ...+..+...
T Consensus 86 ~kq~a~~~a~~sll~~~l~~a~~~t~~v~~~Ny~e~Tkk~yak~l~fP~n~~~p~~l~~qAk~rl~l~~g~~~~~e~~i~ 165 (313)
T KOG3028|consen 86 AKQLADTLAFMSLLEENLEPALLYTFWVDTENYNEVTKKWYAKALPFPLNYILPGKLQRQAKERLQLTLGELTEREDQIY 165 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHhHHHHHhcCCCchhhcchhhhHHHHHHHHHHHhCCchhhHHHHH
Confidence 578899999999999998887654322 1111111 1112234455
Q ss_pred HHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHHHHHhhCCccc----cCCCccHHHHHHHHhc
Q psy6388 131 DGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLTF----RKPYVNVNRWFTTIVN 194 (480)
Q Consensus 131 ~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~~l~~~~----r~~~PnL~RW~~ti~n 194 (480)
....+++..|.+.|.+.+|++|+++|--|..+++.+..+++..+...- ...++||+|+.+++..
T Consensus 166 ~~Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 166 KDASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLAILLQVALPNDSLQVHLLAHKNLVRYVERIRS 233 (313)
T ss_pred HHHHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHHHHHhccCCchhHHHHHHhcchHHHHHHHHHH
Confidence 667788999999999999999999999999999999997766554321 2348999999999743
No 103
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.64 E-value=7.6e-08 Score=84.68 Aligned_cols=69 Identities=16% Similarity=0.148 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcC
Q psy6388 126 VDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQ 195 (480)
Q Consensus 126 ~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~ 195 (480)
.+...+.+.+.|+.||++|++++||+|+++|+||+++++.+.+.... .+......+|+|.+|+++|.+.
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~-~~~~~~~~~p~l~~W~~r~~~~ 124 (124)
T cd03202 56 REAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIV-SPFPLLEEDDPVYDWFERCLDL 124 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHc-CcccccccCChHHHHHHHHhcC
Confidence 45788889999999999999999999999999999999999887542 1222346899999999999763
No 104
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.59 E-value=1.3e-07 Score=75.70 Aligned_cols=59 Identities=22% Similarity=0.249 Sum_probs=47.9
Q ss_pred CCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc
Q psy6388 11 PDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 11 ~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~ 79 (480)
+.+++|.+++++++++|++|+. +++.. .+ ...|.|+||+|++ ||.+|+||.||+.||++
T Consensus 15 ~~~~~~~kv~~~L~elglpye~-~~~~~------~~--~~~P~GkVP~L~~-dg~vI~eS~aIl~yL~~ 73 (74)
T cd03079 15 PDNASCLAVQTFLKMCNLPFNV-RCRAN------AE--FMSPSGKVPFIRV-GNQIVSEFGPIVQFVEA 73 (74)
T ss_pred CCCCCHHHHHHHHHHcCCCcEE-EecCC------cc--ccCCCCcccEEEE-CCEEEeCHHHHHHHHhc
Confidence 3578999999999999999998 33311 11 2567899999997 88899999999999975
No 105
>KOG1147|consensus
Probab=98.58 E-value=5.7e-08 Score=101.72 Aligned_cols=125 Identities=27% Similarity=0.413 Sum_probs=90.1
Q ss_pred CCCceeeCHHHHHHHHhc-----CCCCCCCHHHHHHHHHHHHHHhhhhhhHHHHhhhhhcccCCCChHhHHHHHHHHHHH
Q psy6388 62 SDGTILTSSSAITYFVAN-----EQLKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRN 136 (480)
Q Consensus 62 ~dG~~L~ES~AIa~YL~~-----~~Llg~t~~e~A~V~qwl~f~~~~l~~~~~~~~~p~~g~~~~nk~~~~~a~~~l~~~ 136 (480)
.||..|..+..+++|.+. ..|+|.+ .++++|+.|++|+... ....+...
T Consensus 43 ~d~~~l~~a~~~~~~~~~~~~~~~~lf~~~-~d~~~vd~w~~~s~~~-------------------------~~~~~s~~ 96 (712)
T KOG1147|consen 43 LDGRKLNGATEPVVYSAALAKADPKLFGNN-IDRSQVDHWVSFSSTF-------------------------SFDEISSS 96 (712)
T ss_pred cccccccCCccchhhhhhhcccCHhHcCCc-ccHHHHHHHHHHhhhc-------------------------chHHHHHH
Confidence 456667777777777665 3689988 8999999999998651 23356778
Q ss_pred HHHHHHHccCCCcccCCCCChhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcChhHHHHhhhhhhhhhhc
Q psy6388 137 LAKLDKHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGEVKLCEKQV 212 (480)
Q Consensus 137 L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~~~~~ek~f 212 (480)
+..|+.+|.-+|||||.++|+||++++++|+.--.........+.+-+|.||++....++..+.+.....-..+.+
T Consensus 97 ~~~ld~~l~~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk~~k~~~~v~Rw~~~~~~~~a~~~v~~t~~~~~k~~ 172 (712)
T KOG1147|consen 97 LSELDKFLVLRTFLVGNSLSIADFAIWGALHSNGMRQEQLKAKKDYQNVERWYDLPEFQEAHNKVLATLVELKKSV 172 (712)
T ss_pred HHHHHhhhhHHHHhhccchhHHHHHHHHHHhcccchHHHHHhhCCchhhhhhcCcHhHHHHHHHHHHHHHhhcccc
Confidence 8999999999999999999999999999988631100001112467899999996666666666665553333333
No 106
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.29 E-value=1.6e-06 Score=77.91 Aligned_cols=71 Identities=18% Similarity=0.157 Sum_probs=58.4
Q ss_pred HhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHHHHHhhCCc----cccCCCccHHHHHHHHhc
Q psy6388 124 QTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQVYQHAMDL----TFRKPYVNVNRWFTTIVN 194 (480)
Q Consensus 124 ~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~~l~~----~~r~~~PnL~RW~~ti~n 194 (480)
...+...+...+.++.|++.|.+++||+|+++|+||+++++.+..+....++. ....+||||.+|+++|.+
T Consensus 60 ~~~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 60 EVEAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred hhHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHHHHH
Confidence 34566778888999999999999999999999999999999988876433431 124689999999999964
No 107
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.25 E-value=2.1e-06 Score=75.95 Aligned_cols=70 Identities=21% Similarity=0.273 Sum_probs=57.1
Q ss_pred hHhHHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHHHHHhhC-C---ccccCCCccHHHHHHHH
Q psy6388 123 KQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQVYQHAM-D---LTFRKPYVNVNRWFTTI 192 (480)
Q Consensus 123 k~~~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~~l-~---~~~r~~~PnL~RW~~ti 192 (480)
....+...+...+.|+.|++.|.+++||+|+++|.||+++++.+..+..... + ......||||.+|++||
T Consensus 52 r~~~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~Ri 125 (126)
T cd03211 52 DKTLDQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCRRI 125 (126)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHhc
Confidence 3455678888899999999999999999999999999999999888764311 1 01256899999999987
No 108
>PRK10638 glutaredoxin 3; Provisional
Probab=98.04 E-value=1.5e-05 Score=64.86 Aligned_cols=78 Identities=9% Similarity=0.017 Sum_probs=63.2
Q ss_pred CCceEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhcCC
Q psy6388 2 AKSGTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVANEQ 81 (480)
Q Consensus 2 Ms~~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~~~ 81 (480)
|+.++||+.+.||+|++++.++...|++|+. ++.... ....+++.+.++.++||++.. +|..|-+...+..+-.+..
T Consensus 1 m~~v~ly~~~~Cp~C~~a~~~L~~~gi~y~~-~dv~~~-~~~~~~l~~~~g~~~vP~i~~-~g~~igG~~~~~~~~~~g~ 77 (83)
T PRK10638 1 MANVEIYTKATCPFCHRAKALLNSKGVSFQE-IPIDGD-AAKREEMIKRSGRTTVPQIFI-DAQHIGGCDDLYALDARGG 77 (83)
T ss_pred CCcEEEEECCCChhHHHHHHHHHHcCCCcEE-EECCCC-HHHHHHHHHHhCCCCcCEEEE-CCEEEeCHHHHHHHHHcCC
Confidence 6689999999999999999999999999998 444221 123567888899999999986 7788999988888777644
Q ss_pred C
Q psy6388 82 L 82 (480)
Q Consensus 82 L 82 (480)
|
T Consensus 78 l 78 (83)
T PRK10638 78 L 78 (83)
T ss_pred H
Confidence 3
No 109
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=97.96 E-value=1.7e-05 Score=71.83 Aligned_cols=64 Identities=17% Similarity=0.157 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHH-ccCCCcccCCCCChhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhc
Q psy6388 130 KDGLKRNLAKLDKH-LLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVN 194 (480)
Q Consensus 130 ~~~l~~~L~~Le~~-L~~~tFLvGe~lTlADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n 194 (480)
++.|...++..-+. +.+++|++|+++|||||++++.+..+... .+-.....||+|.+|+++|.+
T Consensus 81 r~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~-~~~~Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 81 REWLYDALNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGH-PAFKDMVEETKIGEWYERMDA 145 (149)
T ss_pred HHHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHh-ccccchhhCcCHHHHHHHHHH
Confidence 44455555443333 45678999999999999999999777543 121125689999999999864
No 110
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=97.87 E-value=5.2e-05 Score=61.24 Aligned_cols=71 Identities=10% Similarity=0.115 Sum_probs=58.6
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHh
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVA 78 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~ 78 (480)
.++||+.++||+|.+++.+++..|++|+. ++.... ....++...++...||++.. +|..+.++..|..||+
T Consensus 9 ~V~ly~~~~Cp~C~~ak~~L~~~gi~y~~-idi~~~--~~~~~~~~~~g~~~vP~i~i-~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 9 SVVVFTKPGCPFCAKAKATLKEKGYDFEE-IPLGND--ARGRSLRAVTGATTVPQVFI-GGKLIGGSDELEAYLA 79 (79)
T ss_pred CEEEEECCCCHhHHHHHHHHHHcCCCcEE-EECCCC--hHHHHHHHHHCCCCcCeEEE-CCEEEcCHHHHHHHhC
Confidence 57999999999999999999999999998 444221 22355666677789999997 7788999999999985
No 111
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=97.83 E-value=7.4e-05 Score=59.64 Aligned_cols=57 Identities=14% Similarity=0.227 Sum_probs=46.7
Q ss_pred CCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc
Q psy6388 12 DNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 12 ~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~ 79 (480)
.+|.|.++.+.++.+|+++++.... + ....|.|++|+|+. +|..+.+|..|++||.+
T Consensus 15 ~sp~clk~~~~Lr~~~~~~~v~~~~-----n-----~~~sp~gkLP~l~~-~~~~i~d~~~Ii~~L~~ 71 (73)
T cd03078 15 VDPECLAVLAYLKFAGAPLKVVPSN-----N-----PWRSPTGKLPALLT-SGTKISGPEKIIEYLRK 71 (73)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEecC-----C-----CCCCCCCccCEEEE-CCEEecChHHHHHHHHH
Confidence 5699999999999999999972111 1 13468999999996 68899999999999975
No 112
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=97.62 E-value=0.00028 Score=55.65 Aligned_cols=71 Identities=14% Similarity=0.095 Sum_probs=55.7
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHh
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVA 78 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~ 78 (480)
+++||+.++||+|.+++-++...|++|+. ++.... ....++........||++.. +|..+.++..|..||+
T Consensus 2 ~v~lys~~~Cp~C~~ak~~L~~~~i~~~~-~~v~~~--~~~~~~~~~~g~~~vP~ifi-~g~~igg~~~l~~~l~ 72 (72)
T cd03029 2 SVSLFTKPGCPFCARAKAALQENGISYEE-IPLGKD--ITGRSLRAVTGAMTVPQVFI-DGELIGGSDDLEKYFA 72 (72)
T ss_pred eEEEEECCCCHHHHHHHHHHHHcCCCcEE-EECCCC--hhHHHHHHHhCCCCcCeEEE-CCEEEeCHHHHHHHhC
Confidence 47999999999999999999999999987 344211 12234445556678999987 6778999999999985
No 113
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=97.62 E-value=0.00075 Score=58.12 Aligned_cols=109 Identities=12% Similarity=0.142 Sum_probs=72.8
Q ss_pred CHHHHHHHHHHHHHHhhhhhhHHHH----hhhhhcccCCCChHhHHHHHHHHHHHHHHHHHHccC-CCcccCCCCChhhh
Q psy6388 86 TEAEKSKIFDYVCFAQDELLPNACR----WVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLT-RTYLVGDYITLADI 160 (480)
Q Consensus 86 t~~e~A~V~qwl~f~~~~l~~~~~~----~~~p~~g~~~~nk~~~~~a~~~l~~~L~~Le~~L~~-~tFLvGe~lTlADI 160 (480)
|..+||..++...+..+++.+.=.. .++.. .-.....+.+...+.+++...+..|.. +++|+|+ -||||.
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~vvf~~----~~~~pLs~~a~~~a~kL~~~a~~ll~~g~~~LFGe-wsIAD~ 75 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTNVVFRG----ARKPPLSEAAQAAAQKLIAVAERLLADGGPNLFGE-WSIADA 75 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-THHHHS------------HHHHHHHHHHHHHHHHHTTT--SSTTSS---HHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChhhhhcC----CCCCCCCHHHHHHHHHHHHHHHHHhccCCCCcccc-chHHHH
Confidence 4578999999998888888653221 11111 111234566777778888888888875 6899998 999999
Q ss_pred hHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcChhHHHHhhh
Q psy6388 161 CNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGE 204 (480)
Q Consensus 161 ~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k~v~~~ 204 (480)
.++..+.++..+..+. -+.+.+|.+++-++|+++..+..
T Consensus 76 dlA~ml~Rl~~~gd~v-----P~~l~~Ya~~qwqrpsVQ~Wla~ 114 (117)
T PF14834_consen 76 DLALMLNRLVTYGDPV-----PERLADYAERQWQRPSVQRWLAL 114 (117)
T ss_dssp HHHHHHHHHHTTT---------HHHHHHHHHHHT-HHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCC-----CHHHHHHHHHHHCCHHHHHHHHH
Confidence 9999999997654432 25899999999999999998764
No 114
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=97.29 E-value=0.00078 Score=52.15 Aligned_cols=70 Identities=9% Similarity=0.031 Sum_probs=53.3
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCcee--eCHHHHHHHH
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTIL--TSSSAITYFV 77 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L--~ES~AIa~YL 77 (480)
++||+.+.||.|++++.++...|+++.. ++..... ...+++++.++.+.||+|+. +|..+ ++..+|.++|
T Consensus 2 i~lf~~~~C~~C~~~~~~l~~~~i~~~~-vdi~~~~-~~~~~~~~~~~~~~vP~~~~-~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 2 VKVYTTPWCPPCKKAKEYLTSKGIAFEE-IDVEKDS-AAREEVLKVLGQRGVPVIVI-GHKIIVGFDPEKLDQLL 73 (74)
T ss_pred EEEEcCCCChhHHHHHHHHHHCCCeEEE-EeccCCH-HHHHHHHHHhCCCcccEEEE-CCEEEeeCCHHHHHHHh
Confidence 7999999999999999999999999987 4542211 12345777889999999997 46666 5666666655
No 115
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=97.24 E-value=0.001 Score=51.08 Aligned_cols=69 Identities=10% Similarity=0.044 Sum_probs=54.8
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHH
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYF 76 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~Y 76 (480)
++||+.+.||+|++++.+++..|++++. ++..... ....++...++..++|++.. +|..+.++..|...
T Consensus 2 v~ly~~~~Cp~C~~~~~~L~~~~i~~~~-~di~~~~-~~~~~l~~~~~~~~~P~~~~-~~~~igg~~~~~~~ 70 (72)
T cd02066 2 VVVFSKSTCPYCKRAKRLLESLGIEFEE-IDILEDG-ELREELKELSGWPTVPQIFI-NGEFIGGYDDLKAL 70 (72)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCcEEE-EECCCCH-HHHHHHHHHhCCCCcCEEEE-CCEEEecHHHHHHh
Confidence 6899999999999999999999999987 4443222 13456677888899999986 77788888877653
No 116
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=97.23 E-value=0.00095 Score=52.76 Aligned_cols=68 Identities=10% Similarity=0.060 Sum_probs=52.8
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHH
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAIT 74 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa 74 (480)
.++||+.+.||.|.+++.+++..|++|+. ++.... ....+++.+.++.+.+|++.. +|..+-+-..+.
T Consensus 2 ~v~ly~~~~C~~C~ka~~~L~~~gi~~~~-~di~~~-~~~~~el~~~~g~~~vP~v~i-~~~~iGg~~~~~ 69 (73)
T cd03027 2 RVTIYSRLGCEDCTAVRLFLREKGLPYVE-INIDIF-PERKAELEERTGSSVVPQIFF-NEKLVGGLTDLK 69 (73)
T ss_pred EEEEEecCCChhHHHHHHHHHHCCCceEE-EECCCC-HHHHHHHHHHhCCCCcCEEEE-CCEEEeCHHHHH
Confidence 47999999999999999999999999998 454322 123567888889999999997 555565554443
No 117
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=97.17 E-value=0.0008 Score=53.01 Aligned_cols=66 Identities=20% Similarity=0.110 Sum_probs=50.6
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhC-CCCcccEEEECCCceeeCHH
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKF-SSPKVPAFESSDGTILTSSS 71 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~n-P~gkVPvL~~~dG~~L~ES~ 71 (480)
+++||+.++||.|++++..+...|++++. ++.... .....++.+.+ +...||+++.++|..+.+..
T Consensus 1 ~v~ly~~~~C~~C~~~~~~L~~~~~~~~~-idi~~~-~~~~~~~~~~~~~~~~vP~i~~~~g~~l~~~~ 67 (77)
T TIGR02200 1 TITVYGTTWCGYCAQLMRTLDKLGAAYEW-VDIEED-EGAADRVVSVNNGNMTVPTVKFADGSFLTNPS 67 (77)
T ss_pred CEEEEECCCChhHHHHHHHHHHcCCceEE-EeCcCC-HhHHHHHHHHhCCCceeCEEEECCCeEecCCC
Confidence 36899999999999999999999999987 554322 12234555665 88899999877887776644
No 118
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=97.09 E-value=0.0012 Score=51.00 Aligned_cols=62 Identities=13% Similarity=0.005 Sum_probs=47.9
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeC
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTS 69 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~E 69 (480)
++||+.+.||.|.+++.++...|++++. ++.... ....+++.+.+|.+.+|+++. +|..+.+
T Consensus 2 v~l~~~~~c~~c~~~~~~l~~~~i~~~~-~~i~~~-~~~~~~~~~~~~~~~vP~i~~-~~~~i~g 63 (73)
T cd02976 2 VTVYTKPDCPYCKATKRFLDERGIPFEE-VDVDED-PEALEELKKLNGYRSVPVVVI-GDEHLSG 63 (73)
T ss_pred EEEEeCCCChhHHHHHHHHHHCCCCeEE-EeCCCC-HHHHHHHHHHcCCcccCEEEE-CCEEEec
Confidence 5899999999999999999999999987 444221 123457778889999999997 4544544
No 119
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=96.82 E-value=0.0042 Score=48.88 Aligned_cols=71 Identities=7% Similarity=0.031 Sum_probs=52.2
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCC-cccEEEECCCceeeCHHHHHHHHh
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSP-KVPAFESSDGTILTSSSAITYFVA 78 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~g-kVPvL~~~dG~~L~ES~AIa~YL~ 78 (480)
++||+.+.||+|.+++.+++..|++++. ++.... .....++....... .||++.. +|..+.+...+.++-.
T Consensus 2 i~ly~~~~Cp~C~~ak~~L~~~~i~~~~-i~i~~~-~~~~~~~~~~~~~~~~vP~v~i-~g~~igg~~~~~~~~~ 73 (75)
T cd03418 2 VEIYTKPNCPYCVRAKALLDKKGVDYEE-IDVDGD-PALREEMINRSGGRRTVPQIFI-GDVHIGGCDDLYALER 73 (75)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCcEEE-EECCCC-HHHHHHHHHHhCCCCccCEEEE-CCEEEeChHHHHHHHh
Confidence 6899999999999999999999999998 444211 11123344444444 8999997 6777888888877643
No 120
>PRK10329 glutaredoxin-like protein; Provisional
Probab=96.69 E-value=0.0048 Score=50.21 Aligned_cols=57 Identities=16% Similarity=0.131 Sum_probs=43.0
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECC
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSD 63 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~d 63 (480)
.++||+.++||+|.+++.++...||+|+. ++.... ....+.+...+...||+++.+|
T Consensus 2 ~v~lYt~~~Cp~C~~ak~~L~~~gI~~~~-idi~~~--~~~~~~~~~~g~~~vPvv~i~~ 58 (81)
T PRK10329 2 RITIYTRNDCVQCHATKRAMESRGFDFEM-INVDRV--PEAAETLRAQGFRQLPVVIAGD 58 (81)
T ss_pred EEEEEeCCCCHhHHHHHHHHHHCCCceEE-EECCCC--HHHHHHHHHcCCCCcCEEEECC
Confidence 58999999999999999999999999998 444211 1112233446788999999744
No 121
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=96.60 E-value=0.0061 Score=48.71 Aligned_cols=75 Identities=8% Similarity=-0.017 Sum_probs=56.8
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhcCCC
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVANEQL 82 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~~~L 82 (480)
++||+.+.||+|.+++-+++..|++++. ++..... ....++.+......||++.. +|..+.+...+..+..+..|
T Consensus 1 v~ly~~~~Cp~C~~a~~~L~~~~i~~~~-~di~~~~-~~~~~~~~~~g~~~vP~i~i-~g~~igg~~~~~~~~~~g~l 75 (79)
T TIGR02181 1 VTIYTKPYCPYCTRAKALLSSKGVTFTE-IRVDGDP-ALRDEMMQRSGRRTVPQIFI-GDVHVGGCDDLYALDREGKL 75 (79)
T ss_pred CEEEecCCChhHHHHHHHHHHcCCCcEE-EEecCCH-HHHHHHHHHhCCCCcCEEEE-CCEEEcChHHHHHHHHcCCh
Confidence 4799999999999999999999999998 4442111 12345556666678999987 67778888888887776443
No 122
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=96.36 E-value=0.012 Score=47.67 Aligned_cols=65 Identities=11% Similarity=0.045 Sum_probs=46.7
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhC-CCCcccEEEECCCceeeCH
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKF-SSPKVPAFESSDGTILTSS 70 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~n-P~gkVPvL~~~dG~~L~ES 70 (480)
..++|+.+.||+|.+++-++...|++|+. ++..........+++... +..+||++..++ ..+...
T Consensus 2 ~v~iyt~~~CPyC~~ak~~L~~~g~~~~~-i~~~~~~~~~~~~~~~~~~g~~tvP~I~i~~-~~igg~ 67 (80)
T COG0695 2 NVTIYTKPGCPYCKRAKRLLDRKGVDYEE-IDVDDDEPEEAREMVKRGKGQRTVPQIFIGG-KHVGGC 67 (80)
T ss_pred CEEEEECCCCchHHHHHHHHHHcCCCcEE-EEecCCcHHHHHHHHHHhCCCCCcCEEEECC-EEEeCc
Confidence 58999999999999999999999999998 333322211233555444 778999999844 344433
No 123
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=96.36 E-value=0.0095 Score=46.94 Aligned_cols=57 Identities=16% Similarity=0.080 Sum_probs=42.1
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCC
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDG 64 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG 64 (480)
++||+.+.||.|.+++-+++..|++|+. ++.... ....+.+...+...||+++.++.
T Consensus 1 v~ly~~~~Cp~C~~ak~~L~~~~i~~~~-~di~~~--~~~~~~~~~~g~~~vP~v~~~g~ 57 (72)
T TIGR02194 1 ITVYSKNNCVQCKMTKKALEEHGIAFEE-INIDEQ--PEAIDYVKAQGFRQVPVIVADGD 57 (72)
T ss_pred CEEEeCCCCHHHHHHHHHHHHCCCceEE-EECCCC--HHHHHHHHHcCCcccCEEEECCC
Confidence 3899999999999999999999999998 444211 12233344456668999998443
No 124
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=96.18 E-value=0.02 Score=45.59 Aligned_cols=57 Identities=11% Similarity=0.139 Sum_probs=46.7
Q ss_pred CCchHHHHHHHHHhcCCC---eEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHh
Q psy6388 12 DNFRTYQILIAAEYSSFK---VNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVA 78 (480)
Q Consensus 12 ~spra~kv~iaa~~~Gl~---~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~ 78 (480)
.+|.|.++.+.++..+.+ +++.... . + .++|.|++|+|.+.+|..+.+-..|++||.
T Consensus 13 id~ecLa~~~yl~~~~~~~~~~~vv~s~------n-~---~~Sptg~LP~L~~~~~~~vsg~~~Iv~yL~ 72 (72)
T PF10568_consen 13 IDPECLAVIAYLKFAGAPEQQFKVVPSN------N-P---WLSPTGELPALIDSGGTWVSGFRNIVEYLR 72 (72)
T ss_pred cCHHHHHHHHHHHhCCCCCceEEEEEcC------C-C---CcCCCCCCCEEEECCCcEEECHHHHHHhhC
Confidence 578999999999999999 8872111 1 1 367999999999867889999999999983
No 125
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=96.03 E-value=0.026 Score=44.97 Aligned_cols=77 Identities=10% Similarity=-0.026 Sum_probs=55.8
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhcCCC
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVANEQL 82 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~~~L 82 (480)
+++|+.+.||+|.+++-++...+++++. .++..........++.+......+|++.. +|..+.++..|..+..+..|
T Consensus 2 v~~y~~~~Cp~C~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~P~v~~-~g~~igg~~~~~~~~~~g~l 79 (82)
T cd03419 2 VVVFSKSYCPYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTGQRTVPNVFI-GGKFIGGCDDLMALHKSGKL 79 (82)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCCcEEEEEeCCCChHHHHHHHHHHhCCCCCCeEEE-CCEEEcCHHHHHHHHHcCCc
Confidence 6899999999999999999999999987 33321110000123445555568999986 67789999999998877554
No 126
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=95.98 E-value=0.028 Score=45.74 Aligned_cols=73 Identities=15% Similarity=0.130 Sum_probs=54.6
Q ss_pred ceEEEEcCCCchHHHHHHHHHh-----cCCCeEeeccCCCCCCCCChhhhhhCCC--CcccEEEECCCceeeCHHHHHHH
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEY-----SSFKVNIPKDFVFGKSNKNADFVSKFSS--PKVPAFESSDGTILTSSSAITYF 76 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~-----~Gl~~e~~v~~~~~~~~~~~efl~~nP~--gkVPvL~~~dG~~L~ES~AIa~Y 76 (480)
.+++|+.++||+|.+++-++.. .|++++. ++..... ...+++....-. ..||++.. ||..+.+...|..+
T Consensus 2 ~v~iy~~~~C~~C~~a~~~L~~l~~~~~~i~~~~-idi~~~~-~~~~el~~~~~~~~~~vP~ifi-~g~~igg~~~~~~~ 78 (85)
T PRK11200 2 FVVIFGRPGCPYCVRAKELAEKLSEERDDFDYRY-VDIHAEG-ISKADLEKTVGKPVETVPQIFV-DQKHIGGCTDFEAY 78 (85)
T ss_pred EEEEEeCCCChhHHHHHHHHHhhcccccCCcEEE-EECCCCh-HHHHHHHHHHCCCCCcCCEEEE-CCEEEcCHHHHHHH
Confidence 7899999999999999999998 8999987 4442111 112344443332 57999987 78889999999988
Q ss_pred Hhc
Q psy6388 77 VAN 79 (480)
Q Consensus 77 L~~ 79 (480)
+..
T Consensus 79 ~~~ 81 (85)
T PRK11200 79 VKE 81 (85)
T ss_pred HHH
Confidence 865
No 127
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=95.83 E-value=0.031 Score=47.17 Aligned_cols=77 Identities=12% Similarity=0.072 Sum_probs=54.7
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCC--ChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhcCC
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNK--NADFVSKFSSPKVPAFESSDGTILTSSSAITYFVANEQ 81 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~--~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~~~ 81 (480)
.+++|+.+.||+|.+++-++...|++++. ++........ ..++...+....||.+.. +|..+-+...+.....+..
T Consensus 9 ~Vvvysk~~Cp~C~~ak~~L~~~~i~~~~-vdid~~~~~~~~~~~l~~~tg~~tvP~Vfi-~g~~iGG~ddl~~l~~~G~ 86 (99)
T TIGR02189 9 AVVIFSRSSCCMCHVVKRLLLTLGVNPAV-HEIDKEPAGKDIENALSRLGCSPAVPAVFV-GGKLVGGLENVMALHISGS 86 (99)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCCCEE-EEcCCCccHHHHHHHHHHhcCCCCcCeEEE-CCEEEcCHHHHHHHHHcCC
Confidence 57999999999999999999999999987 4443221111 123444556679999987 6777888777776555433
Q ss_pred C
Q psy6388 82 L 82 (480)
Q Consensus 82 L 82 (480)
|
T Consensus 87 L 87 (99)
T TIGR02189 87 L 87 (99)
T ss_pred H
Confidence 3
No 128
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=95.42 E-value=0.039 Score=49.18 Aligned_cols=68 Identities=13% Similarity=0.170 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcChhH
Q psy6388 126 VDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEF 198 (480)
Q Consensus 126 ~~~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~ 198 (480)
.....++++..|..|+..|......-| ++|+-||.+++.|+.+ +.+-+..| =|+|.+|+++|...-.+
T Consensus 57 t~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~L-tivkgi~~---P~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 57 TPELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSL-TIVKGIQW---PPKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHH-CTCTTS------HHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhh-hhccCCcC---CHHHHHHHHHHHHHcCC
Confidence 356677788888888888886666666 8999999999999876 33333322 26999999999765443
No 129
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=95.28 E-value=0.064 Score=42.75 Aligned_cols=75 Identities=11% Similarity=0.009 Sum_probs=54.5
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCC--eEeeccCCCCCCCC---ChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHhc
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFK--VNIPKDFVFGKSNK---NADFVSKFSSPKVPAFESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~--~e~~v~~~~~~~~~---~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~ 79 (480)
+++|+.++||+|.+++-++...+++ ++. ++..... +. ...+.+......+|.+.. +|..+.++..+..+..+
T Consensus 1 V~~f~~~~Cp~C~~~~~~L~~~~i~~~~~~-~~v~~~~-~~~~~~~~l~~~~g~~~vP~v~i-~g~~igg~~~~~~~~~~ 77 (84)
T TIGR02180 1 VVVFSKSYCPYCKKAKEILAKLNVKPAYEV-VELDQLS-NGSEIQDYLEEITGQRTVPNIFI-NGKFIGGCSDLLALYKS 77 (84)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCCCCCEE-EEeeCCC-ChHHHHHHHHHHhCCCCCCeEEE-CCEEEcCHHHHHHHHHc
Confidence 3689999999999999999999998 766 2322111 11 112445555668999987 77889999999998877
Q ss_pred CCC
Q psy6388 80 EQL 82 (480)
Q Consensus 80 ~~L 82 (480)
+.|
T Consensus 78 g~l 80 (84)
T TIGR02180 78 GKL 80 (84)
T ss_pred CCh
Confidence 554
No 130
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=95.14 E-value=0.02 Score=43.28 Aligned_cols=59 Identities=12% Similarity=0.032 Sum_probs=44.1
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCce
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTI 66 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~ 66 (480)
++||+.++||.|.+++-++...|++|+. ++..... ...+++.+......+|++.. ||..
T Consensus 1 V~vy~~~~C~~C~~~~~~L~~~~i~y~~-~dv~~~~-~~~~~l~~~~g~~~~P~v~i-~g~~ 59 (60)
T PF00462_consen 1 VVVYTKPGCPYCKKAKEFLDEKGIPYEE-VDVDEDE-EAREELKELSGVRTVPQVFI-DGKF 59 (60)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTBEEEE-EEGGGSH-HHHHHHHHHHSSSSSSEEEE-TTEE
T ss_pred cEEEEcCCCcCHHHHHHHHHHcCCeeeE-cccccch-hHHHHHHHHcCCCccCEEEE-CCEE
Confidence 4799999999999999999999999998 4442111 22345555556679999997 6643
No 131
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=95.06 E-value=0.095 Score=42.87 Aligned_cols=72 Identities=15% Similarity=0.137 Sum_probs=52.0
Q ss_pred eEEEEcCCCchHHHHHHHHHhcC-----CCeEeeccCCCCCCCCChhhhhhCCC--CcccEEEECCCceeeCHHHHHHHH
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSS-----FKVNIPKDFVFGKSNKNADFVSKFSS--PKVPAFESSDGTILTSSSAITYFV 77 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~G-----l~~e~~v~~~~~~~~~~~efl~~nP~--gkVPvL~~~dG~~L~ES~AIa~YL 77 (480)
.++|+.++||+|.+++-++...+ ++++. ++.... ....+++....-. ..||++.. ||..+-++..|..++
T Consensus 2 V~vys~~~Cp~C~~ak~~L~~~~~~~~~i~~~~-idi~~~-~~~~~~l~~~~g~~~~tVP~ifi-~g~~igG~~dl~~~~ 78 (86)
T TIGR02183 2 VVIFGRPGCPYCVRAKQLAEKLAIERADFEFRY-IDIHAE-GISKADLEKTVGKPVETVPQIFV-DEKHVGGCTDFEQLV 78 (86)
T ss_pred EEEEeCCCCccHHHHHHHHHHhCcccCCCcEEE-EECCCC-HHHHHHHHHHhCCCCCCcCeEEE-CCEEecCHHHHHHHH
Confidence 58999999999999999999885 45665 343211 1113445544432 58999987 777899999999988
Q ss_pred hc
Q psy6388 78 AN 79 (480)
Q Consensus 78 ~~ 79 (480)
.+
T Consensus 79 ~~ 80 (86)
T TIGR02183 79 KE 80 (86)
T ss_pred Hh
Confidence 76
No 132
>PHA03050 glutaredoxin; Provisional
Probab=94.40 E-value=0.17 Score=43.47 Aligned_cols=71 Identities=17% Similarity=-0.023 Sum_probs=50.8
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCC---CeEeeccCCCCCC--CCChhhhhhCCCCcccEEEECCCceeeCHHHHHHH
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSF---KVNIPKDFVFGKS--NKNADFVSKFSSPKVPAFESSDGTILTSSSAITYF 76 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl---~~e~~v~~~~~~~--~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~Y 76 (480)
.+++|+.+.||+|.+++-++...|+ +|+. ++...... ....++.+..-...||.+.. +|..|-+...+...
T Consensus 14 ~V~vys~~~CPyC~~ak~~L~~~~i~~~~~~~-i~i~~~~~~~~~~~~l~~~tG~~tVP~IfI-~g~~iGG~ddl~~l 89 (108)
T PHA03050 14 KVTIFVKFTCPFCRNALDILNKFSFKRGAYEI-VDIKEFKPENELRDYFEQITGGRTVPRIFF-GKTSIGGYSDLLEI 89 (108)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCCcCCcEE-EECCCCCCCHHHHHHHHHHcCCCCcCEEEE-CCEEEeChHHHHHH
Confidence 5799999999999999999999999 7776 34321111 11345666666678999987 66667666666553
No 133
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=94.32 E-value=0.18 Score=44.63 Aligned_cols=65 Identities=18% Similarity=0.179 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcChh
Q psy6388 128 SAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPE 197 (480)
Q Consensus 128 ~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~ 197 (480)
...++++..|..|+..+..... ++..+|+.||.+++.|..+. .+-+..| =|+|.+|+++|.++-.
T Consensus 60 ~~i~~l~~~L~~l~~ll~~~~~-~n~~ls~DDi~lFp~LR~Lt-~vkgi~~---P~~V~~Y~~~~s~~t~ 124 (128)
T cd03199 60 QYIAALNALLEELDPLILSSEA-VNGQLSTDDIILFPILRNLT-LVKGLVF---PPKVKAYLERMSALTK 124 (128)
T ss_pred HHHHHHHHHHHHHHHHHcCccc-cCCcCCHHHHHHHHHHhhhh-hhcCCCC---CHHHHHHHHHHHHHhC
Confidence 4556677777777777754444 45679999999999998763 3333322 2699999999977543
No 134
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=93.50 E-value=0.32 Score=40.82 Aligned_cols=76 Identities=11% Similarity=0.089 Sum_probs=52.6
Q ss_pred ceEEEEc-----CCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHh
Q psy6388 4 SGTLYSW-----PDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVA 78 (480)
Q Consensus 4 ~~tLY~~-----~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~ 78 (480)
...||.. +.||+|.+++-++...|++|+. ++..... ....++...+....||.+.. +|..+-+...+.....
T Consensus 13 ~Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~-~di~~~~-~~~~~l~~~tg~~tvP~vfi-~g~~iGG~ddl~~l~~ 89 (97)
T TIGR00365 13 PVVLYMKGTPQFPQCGFSARAVQILKACGVPFAY-VNVLEDP-EIRQGIKEYSNWPTIPQLYV-KGEFVGGCDIIMEMYQ 89 (97)
T ss_pred CEEEEEccCCCCCCCchHHHHHHHHHHcCCCEEE-EECCCCH-HHHHHHHHHhCCCCCCEEEE-CCEEEeChHHHHHHHH
Confidence 4577865 7899999999999999999997 4542111 11234445566669999997 6766777777666555
Q ss_pred cCCC
Q psy6388 79 NEQL 82 (480)
Q Consensus 79 ~~~L 82 (480)
+..|
T Consensus 90 ~g~L 93 (97)
T TIGR00365 90 SGEL 93 (97)
T ss_pred CcCh
Confidence 4433
No 135
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=92.99 E-value=0.45 Score=39.21 Aligned_cols=74 Identities=8% Similarity=0.083 Sum_probs=52.4
Q ss_pred ceEEEEc-----CCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHh
Q psy6388 4 SGTLYSW-----PDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVA 78 (480)
Q Consensus 4 ~~tLY~~-----~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~ 78 (480)
..++|.. +.||+|.+++-++...|++|+. ++.... .....++.+.....++|++.. +|..|-+...+.....
T Consensus 9 ~vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~-idv~~~-~~~~~~l~~~~g~~tvP~vfi-~g~~iGG~~~l~~l~~ 85 (90)
T cd03028 9 PVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGT-FDILED-EEVRQGLKEYSNWPTFPQLYV-NGELVGGCDIVKEMHE 85 (90)
T ss_pred CEEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEE-EEcCCC-HHHHHHHHHHhCCCCCCEEEE-CCEEEeCHHHHHHHHH
Confidence 4577765 6899999999999999999998 444211 112334445555668999987 6777888877777555
Q ss_pred cC
Q psy6388 79 NE 80 (480)
Q Consensus 79 ~~ 80 (480)
+.
T Consensus 86 ~g 87 (90)
T cd03028 86 SG 87 (90)
T ss_pred cC
Confidence 43
No 136
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=92.25 E-value=0.42 Score=38.16 Aligned_cols=66 Identities=11% Similarity=0.077 Sum_probs=48.0
Q ss_pred CCceEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCC---------CCCChhhhhh--CCCCcccEEEECCCceee
Q psy6388 2 AKSGTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGK---------SNKNADFVSK--FSSPKVPAFESSDGTILT 68 (480)
Q Consensus 2 Ms~~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~---------~~~~~efl~~--nP~gkVPvL~~~dG~~L~ 68 (480)
|+..+||+...||-|-.....++-.+++|+. |+....- .+..++|-.. |-.--+|+|.++||.++.
T Consensus 1 mskp~lfgsn~Cpdca~a~eyl~rl~v~yd~-VeIt~Sm~NlKrFl~lRDs~~~Fd~vk~~gyiGIPall~~d~~vVl 77 (85)
T COG4545 1 MSKPKLFGSNLCPDCAPAVEYLERLNVDYDF-VEITESMANLKRFLHLRDSRPEFDEVKSNGYIGIPALLTDDGKVVL 77 (85)
T ss_pred CCCceeeccccCcchHHHHHHHHHcCCCcee-eehhhhhhhHHHHHhhhccchhHHhhhhcCcccceEEEeCCCcEEE
Confidence 6778999999999999999999999999987 3332110 1234555432 223358999999998776
No 137
>KOG1668|consensus
Probab=90.40 E-value=0.14 Score=49.43 Aligned_cols=59 Identities=22% Similarity=0.354 Sum_probs=47.5
Q ss_pred HHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHHHhcChhHH
Q psy6388 134 KRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFK 199 (480)
Q Consensus 134 ~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~ti~n~P~~k 199 (480)
.+.+..++.+|.+++|.-|..++-+|+.++..+.-- .-...++|..||+.++.++-...
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~~e-------p~s~~~v~~~~w~~~l~a~~~~~ 68 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALGVE-------PQSARLVNAERWYSKLEALLRLL 68 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhcccC-------cchhhhhHHHHHHHHHHHHHHHH
Confidence 567889999999999999999999999998876421 12457899999999987664444
No 138
>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional
Probab=90.28 E-value=0.89 Score=48.29 Aligned_cols=70 Identities=9% Similarity=-0.080 Sum_probs=50.4
Q ss_pred CCceEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhh---------hhCCCCcccEEEECCCceeeCHHH
Q psy6388 2 AKSGTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFV---------SKFSSPKVPAFESSDGTILTSSSA 72 (480)
Q Consensus 2 Ms~~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl---------~~nP~gkVPvL~~~dG~~L~ES~A 72 (480)
|..+++|+.+.||+|.++.-++...||+|+. ++.... ....++. .......||++.. +|..+.+-..
T Consensus 1 m~~V~vys~~~Cp~C~~aK~~L~~~gi~~~~-idi~~~--~~~~~~~~~~~~~~~~~~~g~~tvP~ifi-~~~~igGf~~ 76 (410)
T PRK12759 1 MVEVRIYTKTNCPFCDLAKSWFGANDIPFTQ-ISLDDD--VKRAEFYAEVNKNILLVEEHIRTVPQIFV-GDVHIGGYDN 76 (410)
T ss_pred CCcEEEEeCCCCHHHHHHHHHHHHCCCCeEE-EECCCC--hhHHHHHHHHhhccccccCCCCccCeEEE-CCEEEeCchH
Confidence 4579999999999999999999999999998 455311 1112322 1234568999987 5666777776
Q ss_pred HHH
Q psy6388 73 ITY 75 (480)
Q Consensus 73 Ia~ 75 (480)
+..
T Consensus 77 l~~ 79 (410)
T PRK12759 77 LMA 79 (410)
T ss_pred HHH
Confidence 655
No 139
>PRK10026 arsenate reductase; Provisional
Probab=88.03 E-value=0.66 Score=41.89 Aligned_cols=34 Identities=18% Similarity=0.115 Sum_probs=30.7
Q ss_pred CCceEEEEcCCCchHHHHHHHHHhcCCCeEeeccC
Q psy6388 2 AKSGTLYSWPDNFRTYQILIAAEYSSFKVNIPKDF 36 (480)
Q Consensus 2 Ms~~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~ 36 (480)
|+.++||++|.|.-|++++-.++..|++|++ +++
T Consensus 1 m~~i~iY~~p~Cst~RKA~~wL~~~gi~~~~-~d~ 34 (141)
T PRK10026 1 MSNITIYHNPACGTSRNTLEMIRNSGTEPTI-IHY 34 (141)
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHHCCCCcEE-Eee
Confidence 5689999999999999999999999999998 444
No 140
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=87.71 E-value=1.9 Score=39.23 Aligned_cols=72 Identities=13% Similarity=0.123 Sum_probs=51.4
Q ss_pred eEEEEcC------CCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCC----CcccEEEECCCceeeCHHHHH
Q psy6388 5 GTLYSWP------DNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSS----PKVPAFESSDGTILTSSSAIT 74 (480)
Q Consensus 5 ~tLY~~~------~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~----gkVPvL~~~dG~~L~ES~AIa 74 (480)
++||+.+ ..|++.+++.+++..||+|+. ++..+.. ...+++.+.... ..||.+.. +|..|-+...|.
T Consensus 2 VvlYttsl~giR~t~~~C~~ak~iL~~~~V~~~e-~DVs~~~-~~~~EL~~~~g~~~~~~tvPqVFI-~G~~IGG~del~ 78 (147)
T cd03031 2 VVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDE-RDVSMDS-GFREELRELLGAELKAVSLPRVFV-DGRYLGGAEEVL 78 (147)
T ss_pred EEEEEcCCcCCCCcChhHHHHHHHHHHCCCcEEE-EECCCCH-HHHHHHHHHhCCCCCCCCCCEEEE-CCEEEecHHHHH
Confidence 6899988 799999999999999999987 4443221 123444444333 58999997 677787777777
Q ss_pred HHHhc
Q psy6388 75 YFVAN 79 (480)
Q Consensus 75 ~YL~~ 79 (480)
+.-.+
T Consensus 79 ~L~e~ 83 (147)
T cd03031 79 RLNES 83 (147)
T ss_pred HHHHc
Confidence 65544
No 141
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=86.44 E-value=0.81 Score=40.03 Aligned_cols=24 Identities=29% Similarity=0.434 Sum_probs=12.8
Q ss_pred ccEE-EECCCceeeCHHHHHHHHhc
Q psy6388 56 VPAF-ESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 56 VPvL-~~~dG~~L~ES~AIa~YL~~ 79 (480)
-|.| ...+|+.|+|++||+|||.+
T Consensus 36 ~~~L~~~~~gF~L~e~NAIvrYl~n 60 (122)
T PF09635_consen 36 GPLLKDKKSGFELFEPNAIVRYLAN 60 (122)
T ss_dssp S--EEE-S--S----HHHHHHHHTT
T ss_pred cceeeecCCceEEecccHHHHHHHh
Confidence 4677 34579999999999999998
No 142
>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri
Probab=86.41 E-value=2.2 Score=32.39 Aligned_cols=58 Identities=16% Similarity=0.174 Sum_probs=39.0
Q ss_pred ceEEEEcCCCchHHHHHHHHHhc-----CCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceee
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYS-----SFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILT 68 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~-----Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ 68 (480)
.+++|+.++||.|.++.-+++.. ++++.. ++. +..++....+-...+|++.. +|..++
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~-id~-----~~~~~l~~~~~i~~vPti~i-~~~~~~ 64 (67)
T cd02973 2 NIEVFVSPTCPYCPDAVQAANRIAALNPNISAEM-IDA-----AEFPDLADEYGVMSVPAIVI-NGKVEF 64 (67)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhCCceEEEE-EEc-----ccCHhHHHHcCCcccCEEEE-CCEEEE
Confidence 46899999999999888777654 455554 333 22345555555567999997 555443
No 143
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=82.76 E-value=1.6 Score=38.05 Aligned_cols=32 Identities=19% Similarity=0.181 Sum_probs=28.9
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEeeccC
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNIPKDF 36 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~ 36 (480)
++|||++|.|..|++++..++..|+++++ +++
T Consensus 2 ~itiy~~p~C~t~rka~~~L~~~gi~~~~-~~y 33 (117)
T COG1393 2 MITIYGNPNCSTCRKALAWLEEHGIEYTF-IDY 33 (117)
T ss_pred eEEEEeCCCChHHHHHHHHHHHcCCCcEE-EEe
Confidence 48999999999999999999999999997 444
No 144
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=80.55 E-value=2.2 Score=36.65 Aligned_cols=31 Identities=10% Similarity=0.061 Sum_probs=28.1
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccC
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDF 36 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~ 36 (480)
++||+.+.|+.|++++-.++..|++|+. +++
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~-idi 31 (111)
T cd03036 1 LKFYEYPKCSTCRKAKKWLDEHGVDYTA-IDI 31 (111)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCceEE-ecc
Confidence 4899999999999999999999999998 444
No 145
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=80.19 E-value=2.1 Score=36.06 Aligned_cols=31 Identities=19% Similarity=0.228 Sum_probs=28.0
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccC
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDF 36 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~ 36 (480)
++||+.+.|+.|++++-.++..|++|+. +++
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~-idi 31 (105)
T cd02977 1 ITIYGNPNCSTSRKALAWLEEHGIEYEF-IDY 31 (105)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCCcEE-Eee
Confidence 4899999999999999999999999998 444
No 146
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=79.87 E-value=2.7 Score=36.22 Aligned_cols=31 Identities=13% Similarity=0.056 Sum_probs=28.4
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccC
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDF 36 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~ 36 (480)
++||+.+.|+.|.+++-.++..|++|+. +++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~gi~~~~-idi 32 (115)
T cd03032 2 IKLYTSPSCSSCRKAKQWLEEHQIPFEE-RNL 32 (115)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCceEE-Eec
Confidence 7999999999999999999999999998 444
No 147
>PRK10824 glutaredoxin-4; Provisional
Probab=79.74 E-value=6.1 Score=34.39 Aligned_cols=75 Identities=15% Similarity=0.127 Sum_probs=51.2
Q ss_pred ceEEEEc-----CCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHh
Q psy6388 4 SGTLYSW-----PDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVA 78 (480)
Q Consensus 4 ~~tLY~~-----~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~ 78 (480)
.+.+|.. |.||+|.++.-++...|++|+. ++..... .-...+...+-..+||-+.. +|..|-++..+.....
T Consensus 16 ~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~-idi~~d~-~~~~~l~~~sg~~TVPQIFI-~G~~IGG~ddl~~l~~ 92 (115)
T PRK10824 16 PILLYMKGSPKLPSCGFSAQAVQALSACGERFAY-VDILQNP-DIRAELPKYANWPTFPQLWV-DGELVGGCDIVIEMYQ 92 (115)
T ss_pred CEEEEECCCCCCCCCchHHHHHHHHHHcCCCceE-EEecCCH-HHHHHHHHHhCCCCCCeEEE-CCEEEcChHHHHHHHH
Confidence 3567765 5899999999999999999987 3442111 12334445555669999987 7776777766666555
Q ss_pred cCC
Q psy6388 79 NEQ 81 (480)
Q Consensus 79 ~~~ 81 (480)
+..
T Consensus 93 ~G~ 95 (115)
T PRK10824 93 RGE 95 (115)
T ss_pred CCC
Confidence 533
No 148
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=79.53 E-value=2.6 Score=37.35 Aligned_cols=31 Identities=13% Similarity=0.072 Sum_probs=28.5
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccC
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDF 36 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~ 36 (480)
++||+.+.|+.|++++-.+...|++|+. +++
T Consensus 2 i~iY~~~~C~~C~ka~~~L~~~gi~~~~-idi 32 (131)
T PRK01655 2 VTLFTSPSCTSCRKAKAWLEEHDIPFTE-RNI 32 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCcEE-eec
Confidence 7999999999999999999999999998 444
No 149
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=75.95 E-value=3.8 Score=36.41 Aligned_cols=31 Identities=3% Similarity=-0.033 Sum_probs=28.6
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccC
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDF 36 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~ 36 (480)
++||+.+.|+.|++++-.+...|++|+. +++
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~~i~~~~-~d~ 32 (132)
T PRK13344 2 IKIYTISSCTSCKKAKTWLNAHQLSYKE-QNL 32 (132)
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCCeEE-EEC
Confidence 7999999999999999999999999998 454
No 150
>PRK12559 transcriptional regulator Spx; Provisional
Probab=74.85 E-value=4.3 Score=36.06 Aligned_cols=31 Identities=13% Similarity=0.006 Sum_probs=28.4
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccC
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDF 36 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~ 36 (480)
+++|+.+.|+.|++++-.+...|++|+. +++
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~gi~~~~-~di 32 (131)
T PRK12559 2 VVLYTTASCASCRKAKAWLEENQIDYTE-KNI 32 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCeEE-EEe
Confidence 7999999999999999999999999998 444
No 151
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=74.36 E-value=4.4 Score=35.06 Aligned_cols=31 Identities=16% Similarity=0.203 Sum_probs=28.5
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccC
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDF 36 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~ 36 (480)
++||+.|.|+-|++++-.++..|++|++ +++
T Consensus 2 i~iy~~p~C~~crkA~~~L~~~gi~~~~-~d~ 32 (113)
T cd03033 2 IIFYEKPGCANNARQKALLEAAGHEVEV-RDL 32 (113)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCCcEE-eeh
Confidence 6899999999999999999999999998 454
No 152
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=73.95 E-value=4.1 Score=35.16 Aligned_cols=31 Identities=13% Similarity=0.064 Sum_probs=28.0
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccC
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDF 36 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~ 36 (480)
++||+.+.|+.|++++-.+...|++|+. +++
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~-idi 31 (117)
T TIGR01617 1 IKVYGSPNCTTCKKARRWLEANGIEYQF-IDI 31 (117)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCceEE-Eec
Confidence 4899999999999999999999999998 454
No 153
>PRK10853 putative reductase; Provisional
Probab=73.51 E-value=4.3 Score=35.38 Aligned_cols=31 Identities=16% Similarity=0.082 Sum_probs=28.6
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccC
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDF 36 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~ 36 (480)
++||+.+.|.-|++++-.++..|+++++ +++
T Consensus 2 i~iy~~~~C~t~rkA~~~L~~~~i~~~~-~d~ 32 (118)
T PRK10853 2 VTLYGIKNCDTIKKARRWLEAQGIDYRF-HDY 32 (118)
T ss_pred EEEEcCCCCHHHHHHHHHHHHcCCCcEE-eeh
Confidence 7999999999999999999999999998 555
No 154
>KOG1752|consensus
Probab=73.36 E-value=13 Score=31.72 Aligned_cols=76 Identities=8% Similarity=0.027 Sum_probs=53.0
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhh----hhCCCCcccEEEECCCceeeCHHHHHHHHhc
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFV----SKFSSPKVPAFESSDGTILTSSSAITYFVAN 79 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl----~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~~ 79 (480)
...+|+-..||+|++++-++.-.|++..+ +.+...+ ...++. ...-..+||.+.. +|..+-.+..|..+-.+
T Consensus 15 ~VVifSKs~C~~c~~~k~ll~~~~v~~~v-vELD~~~--~g~eiq~~l~~~tg~~tvP~vFI-~Gk~iGG~~dl~~lh~~ 90 (104)
T KOG1752|consen 15 PVVIFSKSSCPYCHRAKELLSDLGVNPKV-VELDEDE--DGSEIQKALKKLTGQRTVPNVFI-GGKFIGGASDLMALHKS 90 (104)
T ss_pred CEEEEECCcCchHHHHHHHHHhCCCCCEE-EEccCCC--CcHHHHHHHHHhcCCCCCCEEEE-CCEEEcCHHHHHHHHHc
Confidence 45788888999999999999999998887 3332221 222332 2333348999998 67778888888877766
Q ss_pred CCCC
Q psy6388 80 EQLK 83 (480)
Q Consensus 80 ~~Ll 83 (480)
..|.
T Consensus 91 G~L~ 94 (104)
T KOG1752|consen 91 GELV 94 (104)
T ss_pred CCHH
Confidence 5443
No 155
>PTZ00062 glutaredoxin; Provisional
Probab=72.54 E-value=13 Score=35.64 Aligned_cols=75 Identities=11% Similarity=0.088 Sum_probs=49.9
Q ss_pred ceEEEEc-----CCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceeeCHHHHHHHHh
Q psy6388 4 SGTLYSW-----PDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILTSSSAITYFVA 78 (480)
Q Consensus 4 ~~tLY~~-----~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ES~AIa~YL~ 78 (480)
...||.- |.||+|+++.-++...|++|+. .+..... ....++...+-...||.+.. +|..|-+...+.....
T Consensus 114 ~Vvvf~Kg~~~~p~C~~C~~~k~~L~~~~i~y~~-~DI~~d~-~~~~~l~~~sg~~TvPqVfI-~G~~IGG~d~l~~l~~ 190 (204)
T PTZ00062 114 KILLFMKGSKTFPFCRFSNAVVNMLNSSGVKYET-YNIFEDP-DLREELKVYSNWPTYPQLYV-NGELIGGHDIIKELYE 190 (204)
T ss_pred CEEEEEccCCCCCCChhHHHHHHHHHHcCCCEEE-EEcCCCH-HHHHHHHHHhCCCCCCeEEE-CCEEEcChHHHHHHHH
Confidence 3567754 6899999999999999999987 4443221 12234444555568999998 6766666666655444
Q ss_pred cCC
Q psy6388 79 NEQ 81 (480)
Q Consensus 79 ~~~ 81 (480)
++.
T Consensus 191 ~G~ 193 (204)
T PTZ00062 191 SNS 193 (204)
T ss_pred cCC
Confidence 433
No 156
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=72.13 E-value=5 Score=34.18 Aligned_cols=31 Identities=16% Similarity=0.057 Sum_probs=28.1
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccC
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDF 36 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~ 36 (480)
+++|+.|.|+.|++++-.+...|++|++ +++
T Consensus 1 i~iy~~~~C~~crka~~~L~~~~i~~~~-~di 31 (105)
T cd03035 1 ITLYGIKNCDTVKKARKWLEARGVAYTF-HDY 31 (105)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCCeEE-Eec
Confidence 4899999999999999999999999998 454
No 157
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=70.50 E-value=6.2 Score=34.86 Aligned_cols=32 Identities=19% Similarity=0.206 Sum_probs=29.0
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcCCCeEeeccC
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSSFKVNIPKDF 36 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~ 36 (480)
.++||++|.|.-+++++-.+...|++|++ +++
T Consensus 2 ~i~iY~~p~Cst~RKA~~~L~~~gi~~~~-~d~ 33 (126)
T TIGR01616 2 TIIFYEKPGCANNARQKAALKASGHDVEV-QDI 33 (126)
T ss_pred eEEEEeCCCCHHHHHHHHHHHHCCCCcEE-Eec
Confidence 47999999999999999999999999998 454
No 158
>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.
Probab=68.63 E-value=23 Score=28.30 Aligned_cols=54 Identities=17% Similarity=0.277 Sum_probs=37.2
Q ss_pred ceEEEEcCCCchHHHHHHHHHhcC--CCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECC
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYSS--FKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSD 63 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~G--l~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~d 63 (480)
+++||+-++|+.|..+...++... .++++ .++.. .++++..+.- -.||||...+
T Consensus 1 ~l~l~~k~~C~LC~~a~~~L~~~~~~~~~~l~~vDI~-----~d~~l~~~Y~-~~IPVl~~~~ 57 (81)
T PF05768_consen 1 TLTLYTKPGCHLCDEAKEILEEVAAEFPFELEEVDID-----EDPELFEKYG-YRIPVLHIDG 57 (81)
T ss_dssp -EEEEE-SSSHHHHHHHHHHHHCCTTSTCEEEEEETT-----TTHHHHHHSC-TSTSEEEETT
T ss_pred CEEEEcCCCCChHHHHHHHHHHHHhhcCceEEEEECC-----CCHHHHHHhc-CCCCEEEEcC
Confidence 378999999999999998888554 34444 45653 4456655553 3899999855
No 159
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=64.41 E-value=8.8 Score=32.93 Aligned_cols=31 Identities=19% Similarity=0.264 Sum_probs=28.0
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccC
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDF 36 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~ 36 (480)
++||+.+.|.-|++++-.++..|++|+. +++
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~-~di 31 (112)
T cd03034 1 ITIYHNPRCSKSRNALALLEEAGIEPEI-VEY 31 (112)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEE-Eec
Confidence 4899999999999999999999999998 454
No 160
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=64.00 E-value=9 Score=33.01 Aligned_cols=31 Identities=16% Similarity=0.234 Sum_probs=28.0
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccC
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDF 36 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~ 36 (480)
++||+.|.|.-|++++-.++..|++++. +++
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~-~di 31 (114)
T TIGR00014 1 VTIYHNPRCSKSRNTLALLEDKGIEPEV-VKY 31 (114)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEE-Eec
Confidence 4899999999999999999999999997 454
No 161
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=59.91 E-value=14 Score=34.36 Aligned_cols=37 Identities=22% Similarity=0.170 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHccCC---CcccCCC-CChhhhhHHhhhHHH
Q psy6388 133 LKRNLAKLDKHLLTR---TYLVGDY-ITLADICNACTLLQV 169 (480)
Q Consensus 133 l~~~L~~Le~~L~~~---tFLvGe~-lTlADI~l~~~L~~~ 169 (480)
-.+++..|++.|... .|+.|+. +|-.|+.+++.|.-.
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~ 153 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALL 153 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHH
Confidence 456888999999988 9999987 999999999888765
No 162
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=56.75 E-value=45 Score=26.20 Aligned_cols=56 Identities=11% Similarity=0.146 Sum_probs=36.8
Q ss_pred ceEEEEcCCCchHHHH----HHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceee
Q psy6388 4 SGTLYSWPDNFRTYQI----LIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILT 68 (480)
Q Consensus 4 ~~tLY~~~~spra~kv----~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ 68 (480)
.+.+|+ ++||.|..+ .-+++..|+++++ +... ..++ ....-...+|++.. ||..++
T Consensus 2 ~i~~~a-~~C~~C~~~~~~~~~~~~e~~~~~~~-~~v~-----~~~~-a~~~~v~~vPti~i-~G~~~~ 61 (76)
T TIGR00412 2 KIQIYG-TGCANCQMTEKNVKKAVEELGIDAEF-EKVT-----DMNE-ILEAGVTATPGVAV-DGELVI 61 (76)
T ss_pred EEEEEC-CCCcCHHHHHHHHHHHHHHcCCCeEE-EEeC-----CHHH-HHHcCCCcCCEEEE-CCEEEE
Confidence 577887 899999988 5577778888877 2321 1122 22233458999998 765443
No 163
>KOG0867|consensus
Probab=54.66 E-value=3.6 Score=39.87 Aligned_cols=80 Identities=15% Similarity=0.139 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHHccCCCcccCCCCChhhhhHHhhhHHHHHhhCCccccCCCccHHHHHHH-HhcChhHHHHhhhhh
Q psy6388 128 SAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTT-IVNQPEFKKIVGEVK 206 (480)
Q Consensus 128 ~a~~~l~~~L~~Le~~L~~~tFLvGe~lTlADI~l~~~L~~~~~~~l~~~~r~~~PnL~RW~~t-i~n~P~~k~v~~~~~ 206 (480)
..+..+...|...+.+|...++ .+++++|+.+.+.+............+..++++.+|+.+ ....+ .+..++++.
T Consensus 91 ~~ra~v~~~l~~~~~~l~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g-~~~tlADl~ 166 (226)
T KOG0867|consen 91 KERAIVDQWLEFENGVLDPVTF---ERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKTQVYLAG-DQLTLADLS 166 (226)
T ss_pred HHHHHHHHHHHhhhcccccccc---cceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHccCCcccC-CcccHHHHH
Confidence 5777888888888888888777 899999987777766666656666678889999999999 55566 888999998
Q ss_pred hhhhh
Q psy6388 207 LCEKQ 211 (480)
Q Consensus 207 ~~ek~ 211 (480)
++...
T Consensus 167 ~~~~~ 171 (226)
T KOG0867|consen 167 LASTL 171 (226)
T ss_pred HhhHH
Confidence 88876
No 164
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=53.69 E-value=60 Score=25.04 Aligned_cols=55 Identities=16% Similarity=0.113 Sum_probs=35.9
Q ss_pred eEEEEcCCCchHHHHHHHHH----hcCCCeEe-eccCCCCCCCCChhhhhhCCCCcccEEEECCCc
Q psy6388 5 GTLYSWPDNFRTYQILIAAE----YSSFKVNI-PKDFVFGKSNKNADFVSKFSSPKVPAFESSDGT 65 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~----~~Gl~~e~-~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~ 65 (480)
++||+.++|+.|..+.-.+. ..+..+.. .++.. ..++..+......+|++.. +|.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~vd~~-----~~~~~~~~~~v~~vPt~~~-~g~ 62 (82)
T TIGR00411 3 IELFTSPTCPYCPAAKRVVEEVAKEMGDAVEVEYINVM-----ENPQKAMEYGIMAVPAIVI-NGD 62 (82)
T ss_pred EEEEECCCCcchHHHHHHHHHHHHHhcCceEEEEEeCc-----cCHHHHHHcCCccCCEEEE-CCE
Confidence 68999999999997766653 23434544 34432 3345555666668999997 553
No 165
>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.
Probab=48.32 E-value=43 Score=22.98 Aligned_cols=55 Identities=11% Similarity=-0.013 Sum_probs=34.7
Q ss_pred EEEEcCCCchHHHHHHHHH-----hcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECC
Q psy6388 6 TLYSWPDNFRTYQILIAAE-----YSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSD 63 (480)
Q Consensus 6 tLY~~~~spra~kv~iaa~-----~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~d 63 (480)
.+|+...|+.|.+.+..+. ..++.+.. ++.... .........++...+|+++..+
T Consensus 2 ~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~P~~~~~~ 61 (69)
T cd01659 2 VLFYAPWCPFCQALRPVLAELALLNKGVKFEA-VDVDED--PALEKELKRYGVGGVPTLVVFG 61 (69)
T ss_pred EEEECCCChhHHhhhhHHHHHHhhCCCcEEEE-EEcCCC--hHHhhHHHhCCCccccEEEEEe
Confidence 5677788999999988888 34555544 333211 1112223467888999998754
No 166
>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.
Probab=46.27 E-value=50 Score=27.01 Aligned_cols=57 Identities=16% Similarity=0.074 Sum_probs=36.9
Q ss_pred ceEEEEcCCCchHHHHHHHHHhc-----CCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCcee
Q psy6388 4 SGTLYSWPDNFRTYQILIAAEYS-----SFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTIL 67 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~iaa~~~-----Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L 67 (480)
.+.+|+.++|++|..+.-++... ++.++. ++. ...++.....--..+|+++. ||..+
T Consensus 15 ~i~~F~~~~C~~C~~~~~~~~~l~~~~~~i~~~~-vd~-----~~~~e~a~~~~V~~vPt~vi-dG~~~ 76 (89)
T cd03026 15 NFETYVSLSCHNCPDVVQALNLMAVLNPNIEHEM-IDG-----ALFQDEVEERGIMSVPAIFL-NGELF 76 (89)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHHCCCceEEE-EEh-----HhCHHHHHHcCCccCCEEEE-CCEEE
Confidence 36788889999988776554333 566665 343 23355555666668999997 56433
No 167
>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B ....
Probab=41.65 E-value=60 Score=25.44 Aligned_cols=56 Identities=21% Similarity=0.249 Sum_probs=33.4
Q ss_pred ceEEEEcCCCchHHHHHH----HHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEEECCCceee
Q psy6388 4 SGTLYSWPDNFRTYQILI----AAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTILT 68 (480)
Q Consensus 4 ~~tLY~~~~spra~kv~i----aa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~~~dG~~L~ 68 (480)
.+++ ..++||.|..+.- ++...|+++++ ++. ...++. ...-...+|+++. ||...+
T Consensus 2 ~I~v-~~~~C~~C~~~~~~~~~~~~~~~i~~ei-~~~-----~~~~~~-~~ygv~~vPalvI-ng~~~~ 61 (76)
T PF13192_consen 2 KIKV-FSPGCPYCPELVQLLKEAAEELGIEVEI-IDI-----EDFEEI-EKYGVMSVPALVI-NGKVVF 61 (76)
T ss_dssp EEEE-ECSSCTTHHHHHHHHHHHHHHTTEEEEE-EET-----TTHHHH-HHTT-SSSSEEEE-TTEEEE
T ss_pred EEEE-eCCCCCCcHHHHHHHHHHHHhcCCeEEE-EEc-----cCHHHH-HHcCCCCCCEEEE-CCEEEE
Confidence 5677 4567999996654 45556777766 232 112333 4555668999998 454433
No 168
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=40.23 E-value=1.3e+02 Score=24.99 Aligned_cols=68 Identities=12% Similarity=0.062 Sum_probs=42.0
Q ss_pred eEEEEcCCC------chHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCC----CcccEEEECCCceeeCHHHHH
Q psy6388 5 GTLYSWPDN------FRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSS----PKVPAFESSDGTILTSSSAIT 74 (480)
Q Consensus 5 ~tLY~~~~s------pra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~----gkVPvL~~~dG~~L~ES~AIa 74 (480)
++||+...+ -+++.++.++.-+||+|+. ++....+ ....+..+..+. ..||-+.. +|..+-+.-.+.
T Consensus 2 i~vY~ts~~g~~~~k~~~~~v~~lL~~k~I~f~e-iDI~~d~-~~r~em~~~~~~~~g~~tvPQIFi-~~~~iGg~ddl~ 78 (92)
T cd03030 2 IKVYIASSSGSTEIKKRQQEVLGFLEAKKIEFEE-VDISMNE-ENRQWMRENVPNENGKPLPPQIFN-GDEYCGDYEAFF 78 (92)
T ss_pred EEEEEecccccHHHHHHHHHHHHHHHHCCCceEE-EecCCCH-HHHHHHHHhcCCCCCCCCCCEEEE-CCEEeeCHHHHH
Confidence 577876533 3677889999999999998 4553222 223444455433 57896654 555565555554
Q ss_pred H
Q psy6388 75 Y 75 (480)
Q Consensus 75 ~ 75 (480)
.
T Consensus 79 ~ 79 (92)
T cd03030 79 E 79 (92)
T ss_pred H
Confidence 4
No 169
>PHA02125 thioredoxin-like protein
Probab=37.44 E-value=95 Score=24.10 Aligned_cols=50 Identities=8% Similarity=0.040 Sum_probs=33.7
Q ss_pred eEEEEcCCCchHHHHHHHHHhcCCCeEeeccCCCCCCCCChhhhhhCCCCcccEEE
Q psy6388 5 GTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFE 60 (480)
Q Consensus 5 ~tLY~~~~spra~kv~iaa~~~Gl~~e~~v~~~~~~~~~~~efl~~nP~gkVPvL~ 60 (480)
+.+|+.++|+.|..+.-.++ ++.++. ++.. .+..++....+-...+|++.
T Consensus 2 iv~f~a~wC~~Ck~~~~~l~--~~~~~~-~~vd---~~~~~~l~~~~~v~~~PT~~ 51 (75)
T PHA02125 2 IYLFGAEWCANCKMVKPMLA--NVEYTY-VDVD---TDEGVELTAKHHIRSLPTLV 51 (75)
T ss_pred EEEEECCCCHhHHHHHHHHH--HHhheE-Eeee---CCCCHHHHHHcCCceeCeEE
Confidence 78899999999998766654 344444 2221 12345677777777899998
No 170
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=31.24 E-value=53 Score=28.44 Aligned_cols=27 Identities=19% Similarity=0.449 Sum_probs=22.9
Q ss_pred CCcccEEEECCCc-------------eeeCHHHHHHHHhc
Q psy6388 53 SPKVPAFESSDGT-------------ILTSSSAITYFVAN 79 (480)
Q Consensus 53 ~gkVPvL~~~dG~-------------~L~ES~AIa~YL~~ 79 (480)
....|+|+.++|. .|.++..|++||++
T Consensus 66 ~QslPvLVL~~~~~~~~~~~~~~~~rfi~d~~~I~~~La~ 105 (112)
T PF11287_consen 66 NQSLPVLVLADGAPSPDDAGSHGGRRFIDDPRRILRYLAE 105 (112)
T ss_pred ccCCCEEEeCCCCCCcccccccCCeEEeCCHHHHHHHHHH
Confidence 4568999988775 69999999999987
No 171
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=31.17 E-value=49 Score=27.99 Aligned_cols=28 Identities=18% Similarity=0.216 Sum_probs=21.7
Q ss_pred EEcCCCchHHHHHHHHHhcCCCeEeeccC
Q psy6388 8 YSWPDNFRTYQILIAAEYSSFKVNIPKDF 36 (480)
Q Consensus 8 Y~~~~spra~kv~iaa~~~Gl~~e~~v~~ 36 (480)
|+.+.|..|++++-.++..|++|+. +++
T Consensus 1 Y~~~~C~t~rka~~~L~~~gi~~~~-~d~ 28 (110)
T PF03960_consen 1 YGNPNCSTCRKALKWLEENGIEYEF-IDY 28 (110)
T ss_dssp EE-TT-HHHHHHHHHHHHTT--EEE-EET
T ss_pred CcCCCCHHHHHHHHHHHHcCCCeEe-ehh
Confidence 7889999999999999999999998 555
No 172
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B.
Probab=26.99 E-value=46 Score=23.42 Aligned_cols=29 Identities=28% Similarity=0.694 Sum_probs=18.2
Q ss_pred EEEEeccccc-cccCCCcCCcccceeeEEc
Q psy6388 418 VWVWRGQELA-FNLSPDWKVDYESYDWKKL 446 (480)
Q Consensus 418 ~~~~~g~~~~-~~~~~~~~~~~~~y~~~kl 446 (480)
++|+=|.+.. -.+++-|.+|.+.-+|++|
T Consensus 15 i~v~GG~~~~~~~~~d~~~~d~~~~~W~~~ 44 (49)
T PF13418_consen 15 IYVFGGRDSSGSPLNDLWIFDIETNTWTRL 44 (49)
T ss_dssp EEEE--EEE-TEE---EEEEETTTTEEEE-
T ss_pred EEEECCCCCCCcccCCEEEEECCCCEEEEC
Confidence 6677777765 4777889999999999999
No 173
>PF12569 NARP1: NMDA receptor-regulated protein 1 ; InterPro: IPR021183 This group represents N-terminal acetyltransferase A (NatA) auxiliary subunit and represents a non-catalytic component of the NatA N-terminal acetyltransferase, which catalyzes acetylation of proteins beginning with Met-Ser, Met-Gly and Met-Ala. N-terminal acetylation plays a role in normal eukaryotic translation and processing, protect against proteolytic degradation and protein turnover. NAT1 anchors ARD1 and NAT5 to the ribosome and may present the N- terminal of nascent polypeptides for acetylation [], [].
Probab=23.71 E-value=43 Score=36.82 Aligned_cols=25 Identities=20% Similarity=0.595 Sum_probs=20.2
Q ss_pred CCCccHHHHHHHHhcChhHHHHhhh
Q psy6388 180 KPYVNVNRWFTTIVNQPEFKKIVGE 204 (480)
Q Consensus 180 ~~~PnL~RW~~ti~n~P~~k~v~~~ 204 (480)
..|-.+.||-+++..+|.+......
T Consensus 356 r~Y~~~L~~ed~l~~~~~y~raa~~ 380 (517)
T PF12569_consen 356 RAYVDMLRWEDKLRSHPFYRRAAKG 380 (517)
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHH
Confidence 3567889999999999998776643
No 174
>PF09868 DUF2095: Uncharacterized protein conserved in archaea (DUF2095); InterPro: IPR018662 This domain, found in various hypothetical prokaryotic proteins, has no known function.
Probab=23.10 E-value=24 Score=30.69 Aligned_cols=27 Identities=30% Similarity=0.619 Sum_probs=23.6
Q ss_pred CCCCCCCCCCCCCCCcccccccccccC
Q psy6388 263 KSKDPFDLLPKGTFNMEDFKRFYSNND 289 (480)
Q Consensus 263 K~k~p~~~~~~~~~~~d~~k~~y~n~~ 289 (480)
|.|.|.|.||=-..++++||+.|-+.-
T Consensus 2 ~kk~p~d~~~wqeyd~eEFkkkfP~La 28 (128)
T PF09868_consen 2 KKKKPIDEFPWQEYDIEEFKKKFPALA 28 (128)
T ss_pred CCcCcccccchhHhhHHHHHHHhHHHH
Confidence 567899999999999999999997754
No 175
>PHA03236 DNA packaging protein UL33; Provisional
Probab=22.14 E-value=56 Score=28.89 Aligned_cols=49 Identities=31% Similarity=0.654 Sum_probs=36.7
Q ss_pred hhhhhhhc---CCCCceEEEEEeeCCccceeeeeec----hhhhHHhhhHHHHhhhhc
Q psy6388 294 IPYFWEKF---DKENYSIWFGEYKYPEELQKVFMSC----NLITGMFQRLDKMRKQTF 344 (480)
Q Consensus 294 ~~~~~~~~---~~~~~s~w~~~yky~~e~~~~fm~~----nli~g~~qr~~~~~k~~f 344 (480)
+.-+.+.| |...|+||| |+-.|+|+..+|=|. |.|+ |=||+-.+-+|.-
T Consensus 24 ld~L~~~Y~~~~~~~~~iwF-E~llP~eie~i~PTTDaKLNyLs-~tqrLasfl~h~~ 79 (127)
T PHA03236 24 LDALEEKYLIDDDFQYRIWF-EYLIPDEIEAIFPTTDSKLNYLS-FTRRLASVLRHGR 79 (127)
T ss_pred HHHHHHHhccCCccceeeee-cccCchHHHhhccchHHHHHHHH-HHHHHHHHHhhcc
Confidence 33445565 556788887 888999999988875 7775 7799998777754
Done!