RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6388
(480 letters)
>d1pbua_ d.58.46.1 (A:) Elongation factor 1-gamma C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 162
Score = 213 bits (543), Expect = 4e-68
Identities = 101/219 (46%), Positives = 129/219 (58%), Gaps = 59/219 (26%)
Query: 264 SKDPFDLLPKGTFNMEDFKRFYSNNDE-AKSIPYFWEKFDKENYSIWFGEYKYPEELQKV 322
+KDPF LPK TF +++FKR YSN D + ++PYFWE FDK+ +S+W+ EY++PEEL +
Sbjct: 1 AKDPFAHLPKSTFALDEFKRKYSNEDTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQT 60
Query: 323 FMSCNLITGMFQRLDKMRKQTFASVCLFGTDNDSTISGVWVWRGQELAFNPDELQKVFMS 382
FMSCNLITGMFQRLDK+RK FASV LFGT+N S+ISGVWV+RGQELAF
Sbjct: 61 FMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQELAF----------- 109
Query: 383 CNLITGMFQRLDKMRKQAFASVCLFGTDNDSTISGVWVWRGQELAFNLSPDWKVDYESYD 442
L+ + D+ ESY
Sbjct: 110 ------------------------------------------PLSPDWQVDY----ESYT 123
Query: 443 WKKLDPEAKETKNLVAQYFSWDGTDSK-GRKFNQGKIFK 480
W+KLDP ++ET+ LV +YFSW+G G+ FNQGKIFK
Sbjct: 124 WRKLDPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 162
>d1nhya1 a.45.1.1 (A:76-219) GST-like domain of elongation factor
1-gamma {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 144
Score = 88.4 bits (218), Expect = 2e-21
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 2/137 (1%)
Query: 79 NEQLKGKTE--AEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRN 136
QL G + +++I + A +L + P+ PYNK++VDSA D + +
Sbjct: 5 KTQLLGADDDLNAQAQIIRWQSLANSDLCIQIANTIVPLKGGAPYNKKSVDSAMDAVDKI 64
Query: 137 LAKLDKHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQP 196
+ + L TYL + I+LAD+ A + ++ +R + + RWF T+ P
Sbjct: 65 VDIFENRLKNYTYLATENISLADLVAASIFTRYFESLFGTEWRAQHPAIVRWFNTVRASP 124
Query: 197 EFKKIVGEVKLCEKQVN 213
K + K +K ++
Sbjct: 125 FLKDEYKDFKFADKPLS 141
>d1v2aa1 a.45.1.1 (A:84-208) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-6 [TaxId: 123217]}
Length = 125
Score = 61.2 bits (148), Expect = 4e-12
Identities = 25/122 (20%), Positives = 52/122 (42%), Gaps = 8/122 (6%)
Query: 85 KTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHL 144
K +S + + F L + ++ +Q D + LK L L++ +
Sbjct: 1 KDPKVRSVVNQRLFFDIGTLYKRIIDVIHLVM----KKEQPSDEQMEKLKGALDLLEQFV 56
Query: 145 LTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQ-PEFKKIVG 203
R Y D++T+ADIC T+ + DL +P+ ++ W + + P++++
Sbjct: 57 TERAYAAADHLTVADICLLGTVTALNWLKHDL---EPFPHIRAWLERVRAEMPDYEEFSK 113
Query: 204 EV 205
+V
Sbjct: 114 QV 115
>d1aw9a1 a.45.1.1 (A:83-217) Class phi GST {Maize (Zea mays), type
III [TaxId: 4577]}
Length = 135
Score = 59.8 bits (144), Expect = 1e-11
Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 86 TEAEKSKIFDYVCFAQDELLPNACRWVF-----PILEIYPYNKQTVDSAKDGLKRNLAKL 140
A +K+ ++ PNA VF P+L P + VD + L + L
Sbjct: 7 ATASAAKLEVWLEVESHHFYPNASPLVFQLLVRPLLGGAP-DAAVVDKHAEQLAKVLDVY 65
Query: 141 DKHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKK 200
+ HL YL GD TLAD +A LL + + +V W+ IV +P F+K
Sbjct: 66 EAHLARNKYLAGDEFTLADANHASYLLYLSKTPKAG-LVAARPHVKAWWEAIVARPAFQK 124
Query: 201 IVGEVKL 207
V + L
Sbjct: 125 TVAAIPL 131
>d1r5aa1 a.45.1.1 (A:87-215) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-5 [TaxId: 123217]}
Length = 129
Score = 58.5 bits (141), Expect = 4e-11
Identities = 22/116 (18%), Positives = 38/116 (32%), Gaps = 6/116 (5%)
Query: 85 KTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHL 144
K ++ + + F L + FP + + K L L + L
Sbjct: 1 KDFRSRAIVDQRLHFDLGTLYQRVVDYYFPTI---HLGAHLDQTKKAKLAEALGWFEAML 57
Query: 145 LTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKK 200
+ ++ T+ADI T+ Q+ DL PY V W ++ E
Sbjct: 58 KQYQWSAANHFTIADIALCVTVSQIEAFQFDL---HPYPRVRAWLLKCKDELEGHG 110
>d1axda1 a.45.1.1 (A:81-210) Class phi GST {Maize (Zea mays), type I
[TaxId: 4577]}
Length = 129
Score = 58.0 bits (139), Expect = 6e-11
Identities = 24/128 (18%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
Query: 80 EQLKGKTEAEKSKIFDYVCFAQDELLPNA-----CRWVFPILEIYPYNKQTVDSAKDGLK 134
E L+ E + + ++ ++ + P+L +++ VD + LK
Sbjct: 1 ELLREGNLEEAAMVDVWIEVEANQYTAALNPILFQVLISPMLGGTT-DQKVVDENLEKLK 59
Query: 135 RNLAKLDKHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVN 194
+ L + L YL GD+++LAD+ + L ++ Y +V W++ ++
Sbjct: 60 KVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFATPYAS-VLDAYPHVKAWWSGLME 118
Query: 195 QPEFKKIV 202
+P +K+
Sbjct: 119 RPSVQKVA 126
>d1gnwa1 a.45.1.1 (A:86-211) Class phi GST {Mouse-ear cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 126
Score = 56.2 bits (135), Expect = 2e-10
Identities = 19/100 (19%), Positives = 34/100 (34%), Gaps = 5/100 (5%)
Query: 106 PNACRWVFPI----LEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADIC 161
P A + F + ++ V + L + L + L YL G+ TL D+
Sbjct: 27 PVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLH 86
Query: 162 NACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKI 201
+ + + VN W I +P +K+
Sbjct: 87 HIPAIQYLLGTPTKK-LFTERPRVNEWVAEITKRPASEKV 125
>d2gsqa1 a.45.1.1 (A:76-202) Class sigma GST {Squid (Ommastrephes
sloani pacificus) [TaxId: 6634]}
Length = 127
Score = 55.5 bits (133), Expect = 3e-10
Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 2/119 (1%)
Query: 82 LKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLD 141
L GKT EK ++ + QD P + S K L
Sbjct: 1 LDGKTSLEKYRVDEITETLQDIFNDVVKIKFAPEAAKEAVQQNYEKSCKRLAPFLEGLLV 60
Query: 142 KHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKK 200
+ + VG+ +TLAD+ L +H +L P + + P+
Sbjct: 61 SNGGGDGFFVGNSMTLADLHCYVALEVPLKHTPELLKDCPK--IVALRKRVAECPKIAA 117
>d2hrkb1 a.45.1.2 (B:4-121) GU4 nucleic-binding protein 1, Arc1p
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 118
Score = 54.6 bits (131), Expect = 5e-10
Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 7/87 (8%)
Query: 121 YNKQTVDSAKDG-LKRNLAKLDKHLLTRTYLVGD-YITLADICNACTLLQVYQHAMDLTF 178
Q K G ++ +L +L+ L T++V Y T D+ L + + + +
Sbjct: 26 QAAQWESVLKSGQIQPHLDQLNLVLRDNTFIVSTLYPTSTDVHVFEVALPLIKDLVASSK 85
Query: 179 -----RKPYVNVNRWFTTIVNQPEFKK 200
Y ++ RW + N E
Sbjct: 86 DVKSTYTTYRHILRWIDYMQNLLEVSS 112
>d1k0da1 a.45.1.1 (A:201-351) Yeast prion protein ure2p, nitrogen
regulation fragment {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 151
Score = 55.3 bits (132), Expect = 6e-10
Identities = 15/91 (16%), Positives = 33/91 (36%), Gaps = 2/91 (2%)
Query: 110 RWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQV 169
+ E T ++A + +LVGD +T+AD+ V
Sbjct: 61 MALAERREALVMELDTENAAAYSAGTTPMSQSRFFDYPVWLVGDKLTIADLAFVPWNNVV 120
Query: 170 YQHAMDLTFRKPYVNVNRWFTTIVNQPEFKK 200
+ +++ + + V +W ++ +P K
Sbjct: 121 DRIGINI--KIEFPEVYKWTKHMMRRPAVIK 149
>d1f2ea1 a.45.1.1 (A:81-201) Class beta GST {Sphingomonas
paucimobilis [TaxId: 13689]}
Length = 121
Score = 53.8 bits (129), Expect = 1e-09
Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 8/113 (7%)
Query: 88 AEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTR 147
++ ++ + F E P + + +A + +K +LA LDK L R
Sbjct: 9 LDRYRLLSRLSFLGSEFHKAFVPLFAP-----ATSDEAKAAAAESVKNHLAALDKELAGR 63
Query: 148 TYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKK 200
+ G+ ++ADI L +D+ Y + + I +P
Sbjct: 64 DHYAGNAFSVADIYLYVMLGWPAYVGIDM---AAYPALGAYAGKIAQRPAVGA 113
>d1jlva1 a.45.1.1 (A:85-207) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-3 [TaxId: 123217]}
Length = 123
Score = 53.9 bits (129), Expect = 1e-09
Identities = 18/120 (15%), Positives = 41/120 (34%), Gaps = 6/120 (5%)
Query: 85 KTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHL 144
K +++ + + F L + +P + + + +K + L+ L
Sbjct: 1 KDPQKRAVVNQRLYFDMGTLYQRFADYYYPQI---FAKQPANAENEKKMKDAVDFLNTFL 57
Query: 145 LTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGE 204
Y+ GD +T+AD+ T+ + + Y +V W+ + I
Sbjct: 58 DGHKYVAGDSLTIADLTVLATV---STYDVAGFELAKYPHVAAWYERTRKEAPGAAINEA 114
>d1pmta1 a.45.1.1 (A:81-201) Class beta GST {Proteus mirabilis
[TaxId: 584]}
Length = 121
Score = 53.1 bits (127), Expect = 2e-09
Identities = 16/113 (14%), Positives = 35/113 (30%), Gaps = 8/113 (7%)
Query: 88 AEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTR 147
E+ +++ F E+ + + K+ LK ++ L +
Sbjct: 9 LERYHQIEWLNFLASEVHKGYSPLFSS-----DTPESYLPVVKNKLKSKFVYINDVLSKQ 63
Query: 148 TYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKK 200
+ GD+ T+AD A+D ++ + I +P
Sbjct: 64 KCVCGDHFTVADAYLFTLSQWAPHVALD---LTDLSHLQDYLARIAQRPNVHS 113
>d1gsua1 a.45.1.1 (A:85-217) Class mu GST {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 133
Score = 50.8 bits (121), Expect = 2e-08
Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 8/119 (6%)
Query: 82 LKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLD 141
+ G+TE EK ++ D R F L P ++ + + L L +L
Sbjct: 1 MCGETEVEKQRVDVLENHLMD------LRMAFARLCYSPDFEKLKPAYLEQLPGKLRQLS 54
Query: 142 KHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKK 200
+ L +R++ VGD +T D L Q + N++++ +
Sbjct: 55 RFLGSRSWFVGDKLTFVDFLAYDVLDQQ--RMFVPDCPELQGNLSQFLQRFEALEKISA 111
>d1n2aa1 a.45.1.1 (A:81-201) Class beta GST {Escherichia coli
[TaxId: 562]}
Length = 121
Score = 49.6 bits (118), Expect = 4e-08
Identities = 15/117 (12%), Positives = 42/117 (35%), Gaps = 8/117 (6%)
Query: 88 AEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTR 147
+ K +++ + EL P ++ + + L++ L +++ L
Sbjct: 9 ISRYKTIEWLNYIATELHKGFTPLFRP-----DTPEEYKPTVRAQLEKKLQYVNEALKDE 63
Query: 148 TYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIVGE 204
++ G T+AD L Y ++ + ++ + + +PE + +
Sbjct: 64 HWICGQRFTIADAYLFTVLRWAYAVKLN---LEGLEHIAAFMQRMAERPEVQDALSA 117
>d2cvda1 a.45.1.1 (A:76-199) Class sigma GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 124
Score = 49.0 bits (116), Expect = 6e-08
Identities = 18/121 (14%), Positives = 35/121 (28%), Gaps = 6/121 (4%)
Query: 82 LKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLD 141
L G TE E+ + V D + W ++ + + + LD
Sbjct: 2 LAGNTEMEQCHVDAIVDTLDD--FMSCFPWAEKKQDVK--EQMFNELLTYNAPHLMQDLD 57
Query: 142 KHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKI 201
+L R +L+G +T AD + + + + P
Sbjct: 58 TYLGGREWLIGMSVTWADFYWEICSTTL--LVFKPDLLDNHPRLVTLRKKVQAIPAVANW 115
Query: 202 V 202
+
Sbjct: 116 I 116
>d1tw9a1 a.45.1.1 (A:78-206) Class sigma GST {Heligmosomoides
polygyrus [TaxId: 6339]}
Length = 129
Score = 47.8 bits (113), Expect = 2e-07
Identities = 24/121 (19%), Positives = 40/121 (33%), Gaps = 7/121 (5%)
Query: 84 GKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYN--KQTVDSAKDGLKRNLAKLD 141
G T E + I D + A + + + L + K D + L +
Sbjct: 2 GATPFESALI-DSLADAYTDYRAEMKTYYYTALGFMTGDVDKPKTDVLLPARTKFLGFIT 60
Query: 142 KHLLT--RTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFK 199
K L +LVGD I+ D+ A + + + + + V I P K
Sbjct: 61 KFLKKNSSGFLVGDKISWVDLLVAEHVADM--TNRVPEYIEGFPEVKAHMERIQQTPRIK 118
Query: 200 K 200
K
Sbjct: 119 K 119
>d2gsta1 a.45.1.1 (A:85-217) Class mu GST {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 133
Score = 46.5 bits (110), Expect = 6e-07
Identities = 18/119 (15%), Positives = 34/119 (28%), Gaps = 8/119 (6%)
Query: 82 LKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLD 141
L G+TE E+ + D R +L P ++ + +
Sbjct: 1 LCGETEEERIRADIVENQVMD------NRMQLIMLCYNPDFEKQKPEFLKTIPEKMKLYS 54
Query: 142 KHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKK 200
+ L R + GD +T D L H + + N+ + +
Sbjct: 55 EFLGKRPWFAGDKVTYVDFLAYDIL--DQYHIFEPKCLDAFPNLKDFLARFEGLKKISA 111
>d2c4ja1 a.45.1.1 (A:86-218) Class mu GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 133
Score = 46.2 bits (109), Expect = 6e-07
Identities = 18/119 (15%), Positives = 36/119 (30%), Gaps = 8/119 (6%)
Query: 82 LKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLD 141
L G++E E+ + D R L P ++ L L
Sbjct: 1 LCGESEKEQIREDILENQFMD------SRMQLAKLCYDPDFEKLKPEYLQALPEMLKLYS 54
Query: 142 KHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKK 200
+ L + + +GD IT D L + + + + N+ + + +
Sbjct: 55 QFLGKQPWFLGDKITFVDFIAYDVLERN--QVFEPSCLDAFPNLKDFISRFEGLEKISA 111
>d1m0ua1 a.45.1.1 (A:123-249) Class sigma GST {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 127
Score = 45.8 bits (108), Expect = 9e-07
Identities = 21/120 (17%), Positives = 37/120 (30%), Gaps = 4/120 (3%)
Query: 82 LKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLD 141
L G T E +I V D V E K+ V + + L KL+
Sbjct: 1 LCGATPWEDLQIDIVVDTIND--FRLKIAVVSYEPEDEIKEKKLVTLNAEVIPFYLEKLE 58
Query: 142 KHLL-TRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKK 200
+ + +L +T AD+ + + + +PY + + K
Sbjct: 59 QTVKDNDGHLALGKLTWADVY-FAGITDYMNYMVKRDLLEPYPALRGVVDAVNALEPIKA 117
>d1k0ma1 a.45.1.1 (A:92-240) Chloride intracellular channel 1
(clic1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 149
Score = 45.5 bits (107), Expect = 1e-06
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 3/91 (3%)
Query: 115 ILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLADICNACTLLQV---YQ 171
+L+ + S + D+ + R +L G+ +TLAD L V +
Sbjct: 42 LLKALKVLDNYLTSPLPEGVDETSAEDEGVSQRKFLDGNELTLADCNLLPKLHIVQVVCK 101
Query: 172 HAMDLTFRKPYVNVNRWFTTIVNQPEFKKIV 202
T + + V+R+ + + EF
Sbjct: 102 KYRGFTIPEAFRGVHRYLSNAYAREEFASTC 132
>d1b48a1 a.45.1.1 (A:80-222) Class alpha GST {Mouse (Mus musculus),
(a1-4) [TaxId: 10090]}
Length = 143
Score = 44.3 bits (104), Expect = 3e-06
Identities = 27/123 (21%), Positives = 44/123 (35%), Gaps = 7/123 (5%)
Query: 82 LKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLD 141
L GK E+ +I Y QD L+ F + + + R +
Sbjct: 2 LYGKDLKERVRIDMYADGTQD-LMMMIAVAPFKTPKEKEESYDLI--LSRAKTRYFPVFE 58
Query: 142 KHLLT--RTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFK 199
K L +LVG+ ++ ADI +L V + + + + T I N P K
Sbjct: 59 KILKDHGEAFLVGNQLSWADIQLLEAILMV--EELSAPVLSDFPLLQAFKTRISNIPTIK 116
Query: 200 KIV 202
K +
Sbjct: 117 KFL 119
>d1e6ba1 a.45.1.1 (A:88-220) Class zeta GST {Mouse-ear cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 133
Score = 43.7 bits (102), Expect = 5e-06
Identities = 16/115 (13%), Positives = 39/115 (33%), Gaps = 4/115 (3%)
Query: 88 AEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTR 147
+++ + + + P+ V +E ++ + + + L+K L+
Sbjct: 8 HKRAVNYQAMSIVLSGIQPHQNLAVIRYIEEKINVEEKTAWVNNAITKGFTALEKLLVNC 67
Query: 148 T--YLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKK 200
+ GD I LAD+ A + P + + + + P F+
Sbjct: 68 AGKHATGDEIYLADLFLAPQIHGAINRFQINMEPYP--TLAKCYESYNELPAFQN 120
>d1nhya2 c.47.1.5 (A:1-75) GST-like domain of elongation factor
1-gamma {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 75
Score = 41.9 bits (98), Expect = 7e-06
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 7/79 (8%)
Query: 1 MAKSGTLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFE 60
M++ GTLY+ RT+ + V + F F KVPAF
Sbjct: 1 MSQ-GTLYANF-RIRTWVPRGLVKALKLDVKVVT-----PDAAAEQFARDFPLKKVPAFV 53
Query: 61 SSDGTILTSSSAITYFVAN 79
G LT + AI Y++
Sbjct: 54 GPKGYKLTEAMAINYYLVK 72
>d1gula1 a.45.1.1 (A:81-220) Class alpha GST {Human (Homo sapiens),
(a1-1) [TaxId: 9606]}
Length = 140
Score = 43.2 bits (101), Expect = 1e-05
Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 7/121 (5%)
Query: 82 LKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLD 141
L GK E++ I YV D L + A + R +
Sbjct: 1 LFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKEVVNMAQKA---IIRYFPVFE 57
Query: 142 KHLLT--RTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFK 199
K L +++LVG+ ++LAD+ T+L + + + + + N P K
Sbjct: 58 KILRGHGQSFLVGNQLSLADVILLQTILAL--EEKIPNILSAFPFLQEYTVKLSNIPTIK 115
Query: 200 K 200
+
Sbjct: 116 R 116
>d1gwca1 a.45.1.1 (A:87-224) Class tau GST {Aegilops tauschii, also
known as Triticum tauschii [TaxId: 37682]}
Length = 138
Score = 42.9 bits (100), Expect = 1e-05
Identities = 15/112 (13%), Positives = 34/112 (30%), Gaps = 6/112 (5%)
Query: 99 FAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVGDYITLA 158
+ D+L+ +W+ E + A + L + + GD + L
Sbjct: 18 YVDDKLVAPWRQWLRGKTE--EEKSEGKKQAFAAVGVLEGALRECSKGGGFFGGDGVGLV 75
Query: 159 DICNACTL--LQVYQHAM--DLTFRKPYVNVNRWFTTIVNQPEFKKIVGEVK 206
D+ L ++V + + + W + K + +V
Sbjct: 76 DVALGGVLSWMKVTEALSGDKIFDAAKTPLLAAWVERFIELDAAKAALPDVG 127
>d3gtub1 a.45.1.1 (B:85-224) Class mu GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 140
Score = 42.4 bits (99), Expect = 1e-05
Identities = 18/119 (15%), Positives = 34/119 (28%), Gaps = 8/119 (6%)
Query: 82 LKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLD 141
+ G+TE EK ++ D R L +++ + L L +
Sbjct: 5 MCGETEEEKIRVDIIENQVMD------FRTQLIRLCYSSDHEKLKPQYLEELPGQLKQFS 58
Query: 142 KHLLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKK 200
L ++ G+ +T D L Q P N+ + +
Sbjct: 59 MFLGKFSWFAGEKLTFVDFLTYDILDQNRIFDPKCLDEFP--NLKAFMCRFEALEKIAA 115
>d1k3ya1 a.45.1.1 (A:81-222) Class alpha GST {Human (Homo sapiens),
(a1-1) [TaxId: 9606]}
Length = 142
Score = 42.5 bits (99), Expect = 2e-05
Identities = 30/135 (22%), Positives = 48/135 (35%), Gaps = 7/135 (5%)
Query: 82 LKGKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLD 141
L GK E++ I Y+ D V P E + R +
Sbjct: 1 LYGKDIKERALIDMYIEGIADLGEMILLLPVCPPEEKDAKLALIKEKI---KNRYFPAFE 57
Query: 142 KHLLT--RTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFK 199
K L + + YLVG+ ++ ADI L V +D + + + T I N P K
Sbjct: 58 KVLKSHGQDYLVGNKLSRADIHLVELLYYV--EELDSSLISSFPLLKALKTRISNLPTVK 115
Query: 200 KIVGEVKLCEKQVNE 214
K + + ++E
Sbjct: 116 KFLQPGSPRKPPMDE 130
>d1okta1 a.45.1.1 (A:86-211) Pf GST {Malarial parasite (Plasmodium
falciparum) [TaxId: 5833]}
Length = 126
Score = 41.9 bits (98), Expect = 2e-05
Identities = 19/125 (15%), Positives = 36/125 (28%), Gaps = 18/125 (14%)
Query: 84 GKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKH 143
G++E + C QD + + + + L + +K
Sbjct: 2 GESELNEFYADMIFCGVQD--------IHYKFNNTNLFKQNETTFLNEDLPKWSGYFEKL 53
Query: 144 LL--------TRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQ 195
L + Y VG+ +T AD+ + + K + + I N
Sbjct: 54 LKKNHTNNNNDKYYFVGNNLTYADLAVFNLYDDI--ETKYPSSLKNFPLLKAHNEFISNL 111
Query: 196 PEFKK 200
P K
Sbjct: 112 PNIKN 116
>d1duga1 a.45.1.1 (A:81-220) Class alpha GST {Schistosoma japonicum
[TaxId: 6182]}
Length = 140
Score = 40.7 bits (95), Expect = 7e-05
Identities = 22/117 (18%), Positives = 38/117 (32%), Gaps = 8/117 (6%)
Query: 84 GKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKH 143
G E+++I + A ++ R + + L L +
Sbjct: 2 GGCPKERAEI-SMLEGAVLDIRYGVSRIAYS-----KDFETLKVDFLSKLPEMLKMFEDR 55
Query: 144 LLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKK 200
L +TYL GD++T D L V MD + + + I P+ K
Sbjct: 56 LCHKTYLNGDHVTHPDFMLYDALDVV--LYMDPMCLDAFPKLVCFKKRIEAIPQIDK 110
>d2fnoa2 c.47.1.5 (A:1-87) Hypothetical protein
AGR_pAT_752p/Atu5508 {Agrobacterium tumefaciens [TaxId:
358]}
Length = 87
Score = 38.2 bits (88), Expect = 2e-04
Identities = 10/74 (13%), Positives = 18/74 (24%), Gaps = 1/74 (1%)
Query: 6 TLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDG- 64
LY WP FR I + + + P +
Sbjct: 9 DLYYWPVPFRGQLIRGILAHCGCSWDEHDVDAIEGLMDCGAEKQPVAFMGPPVLIDRERN 68
Query: 65 TILTSSSAITYFVA 78
++ AI ++
Sbjct: 69 FAISQMPAIAIYLG 82
>d1oe8a1 a.45.1.1 (A:85-207) Class alpha GST {Blood fluke
(Schistosoma haematobium) [TaxId: 6185]}
Length = 123
Score = 38.5 bits (89), Expect = 3e-04
Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 7/120 (5%)
Query: 84 GKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKH 143
G TE E + + A+D + P E K+ ++ + L + +
Sbjct: 2 GGTEEEYYNVEKLIGQAEDLEHEYYKTLMKPEEEKQKIIKEILNGK---VPVLLDIICES 58
Query: 144 LLTRT--YLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIV-NQPEFKK 200
L T VGD +TLAD+ ++ Y +++ ++ + P K
Sbjct: 59 LKASTGKLAVGDKVTLADLV-LIAVIDHVTDLDKEFLTGKYPEIHKHRENLLASSPRLAK 117
>d1tu7a1 a.45.1.1 (A:78-208) Class pi GST {Onchocerca volvulus
[TaxId: 6282]}
Length = 131
Score = 38.5 bits (89), Expect = 3e-04
Identities = 18/117 (15%), Positives = 37/117 (31%), Gaps = 4/117 (3%)
Query: 84 GKTEAEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKH 143
G+ E E + I + +D L + + + L + L
Sbjct: 1 GENEMETTYIDMFCEGVRD--LHVKYTRMIYMAYETEKDPYIKSILPGELAKFEKLLATR 58
Query: 144 LLTRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKK 200
R ++GD I+ AD L + P + + + ++P+ K+
Sbjct: 59 GNGRNLILGDKISYADYALFEELDVHQILDPHCLDKFP--LLKVFHQRMKDRPKLKE 113
>d1fw1a1 a.45.1.1 (A:88-212) Class zeta GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 125
Score = 36.5 bits (83), Expect = 0.002
Identities = 14/115 (12%), Positives = 37/115 (32%), Gaps = 9/115 (7%)
Query: 88 AEKSKIFDYVCFAQDELLPNACRWVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTR 147
+++ + + + + + A++ + L++ L +
Sbjct: 7 KKRASVRMISDLIAGGI----QPLQNLSVLKQVGEEMQLTWAQNAITCGFNALEQILQST 62
Query: 148 T--YLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKK 200
Y VGD +T+AD+C + PY ++ ++ F+
Sbjct: 63 AGIYCVGDEVTMADLCLVPQV---ANAERFKVDLTPYPTISSINKRLLVLEAFQV 114
>d1oyja1 a.45.1.1 (A:86-230) Class tau GST {Rice (Oryza sativa)
[TaxId: 4530]}
Length = 145
Score = 33.9 bits (77), Expect = 0.014
Identities = 10/97 (10%), Positives = 24/97 (24%), Gaps = 5/97 (5%)
Query: 111 WVFPILEIYPYNKQTVDSAKDGLKRNLAKLDKHLLTRTYLVG---DYITLADICNACTL- 166
++ + +A + L L+ L R + G + D+
Sbjct: 30 LYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTA 89
Query: 167 -LQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIV 202
Y+ + + + W K +
Sbjct: 90 WFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHL 126
>d1eema2 c.47.1.5 (A:5-102) Class omega GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 98
Score = 30.7 bits (69), Expect = 0.085
Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 5/74 (6%)
Query: 6 TLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVF-GKSNKNADFVSKFSSPKVPAFESSDG 64
+YS + + + I + + NK F K VP E+S G
Sbjct: 21 RIYSMRFCPFAERTRLVLKAK----GIRHEVININLKNKPEWFFKKNPFGLVPVLENSQG 76
Query: 65 TILTSSSAITYFVA 78
++ S+ ++
Sbjct: 77 QLIYESAITCEYLD 90
>d1jlva2 c.47.1.5 (A:1-84) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-3 [TaxId: 123217]}
Length = 84
Score = 29.1 bits (65), Expect = 0.23
Identities = 12/74 (16%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Query: 6 TLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGT 65
Y P + + + A ++N+ + + +F+ +P +G
Sbjct: 2 DFYYLPGSAPCRAVQMTAAAVGVELNLKLTNLMAGEHMKPEFLKINPQHCIPTLV-DNGF 60
Query: 66 ILTSSSAITYFVAN 79
L S AI ++A
Sbjct: 61 ALWESRAICTYLAE 74
>d1g7oa2 c.47.1.5 (A:1-75) Glutaredoxin 2 {Escherichia coli
[TaxId: 562]}
Length = 75
Score = 28.6 bits (63), Expect = 0.33
Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 6/79 (7%)
Query: 7 LYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGTI 66
LY + + + NIP + ++ +VP + D
Sbjct: 3 LYIYDHCPYCLKARMIFGL----KNIPVELHVLLNDDAETPTRMVGQKQVPILQKDDSRY 58
Query: 67 LTSSSAITYFVANEQLKGK 85
+ S I ++V ++L GK
Sbjct: 59 MPESMDIVHYV--DKLDGK 75
>d1r5aa2 c.47.1.5 (A:2-86) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-5 [TaxId: 123217]}
Length = 85
Score = 27.6 bits (61), Expect = 1.0
Identities = 11/70 (15%), Positives = 25/70 (35%)
Query: 6 TLYSWPDNFRTYQILIAAEYSSFKVNIPKDFVFGKSNKNADFVSKFSSPKVPAFESSDGT 65
LY P + +L+ A+ ++++ + DFV +P +
Sbjct: 3 VLYYLPASPPCRSVLLLAKMIGVELDLKVLNIMEGEQLKPDFVELNPQHCIPTMDDHGLV 62
Query: 66 ILTSSSAITY 75
+ S ++Y
Sbjct: 63 LWESRVILSY 72
>d1eema1 a.45.1.1 (A:103-241) Class omega GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 139
Score = 28.3 bits (62), Expect = 1.2
Identities = 6/55 (10%), Positives = 16/55 (29%), Gaps = 1/55 (1%)
Query: 148 TYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNVNRWFTTIVNQPEFKKIV 202
T+ G+ I++ D + + + W + P ++
Sbjct: 61 TFFGGNSISMIDYL-IWPWFERLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALL 114
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 471
Score = 27.4 bits (59), Expect = 4.4
Identities = 17/168 (10%), Positives = 52/168 (30%), Gaps = 14/168 (8%)
Query: 251 DDPMDDILAAEPKSKDPFDLLPKGTFNMEDFKRF--YSNNDEAKSIPYFWEKFDKENYSI 308
+ ++++ S+ F + + + + F +S D +P + + K+ +
Sbjct: 278 CEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFV 337
Query: 309 WFGEYKYPEELQKVFMSCNLITGMFQRLDKMRKQTFASVCL-FGTD---NDSTIS----- 359
+ L L + + + + N +S
Sbjct: 338 IPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRA 397
Query: 360 GVWVWRGQELAFNPDELQKV---FMSCNLITGMFQRLDKMRKQAFASV 404
+ G + +E+ +V M G+ ++ ++++ A +
Sbjct: 398 ALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVL 445
>d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP
module {Pseudomonas putida [TaxId: 303]}
Length = 407
Score = 27.1 bits (59), Expect = 4.8
Identities = 10/71 (14%), Positives = 18/71 (25%), Gaps = 20/71 (28%)
Query: 192 IVNQPEFKKIVGEVKLCEKQVNEAALASQSGNVPAAKEEKPKKEKKEAPKKEKEPEPEAD 251
++ E + E + V A KE ++ P A
Sbjct: 347 HWSEEEHQATTAEFE---AAVIAAQ-----------------KEAEQYGTLANGHIPSAA 386
Query: 252 DPMDDILAAEP 262
+D+ P
Sbjct: 387 SMFEDVYKEMP 397
>d1z9ha1 a.45.1.1 (A:213-373) Microsomal prostaglandin E synthase-2
{Crab-eating macaque (Macaca fascicularis) [TaxId:
9541]}
Length = 161
Score = 26.3 bits (58), Expect = 5.3
Identities = 11/79 (13%), Positives = 27/79 (34%), Gaps = 8/79 (10%)
Query: 127 DSAKDGLKRNLAKLDKHLL-TRTYLVGDYITLADICNACTLLQVYQHAMDLTFRKPYVNV 185
D+ ++ L K + R ++ G LAD+ L + + ++
Sbjct: 89 DNVREDLYEAADKWVAAVGKDRPFMGGQKPNLADLAVYGVLRVMEGLDAFDDL-MQHTHI 147
Query: 186 NRWFTTIVNQPEFKKIVGE 204
W+ + ++ + E
Sbjct: 148 QPWYLRV------ERAITE 160
>d1h2vc2 a.118.1.14 (C:291-480) CBP80, 80KDa nuclear cap-binding
protein {Human (Homo sapiens) [TaxId: 9606]}
Length = 190
Score = 25.9 bits (57), Expect = 8.6
Identities = 12/71 (16%), Positives = 18/71 (25%), Gaps = 12/71 (16%)
Query: 373 PDELQKVFMSCNLITGMFQRLDKMRKQAFASVCLFGTDNDSTISGVWVWRGQELAFNLSP 432
P L +V ++ RLD M + + + S W W
Sbjct: 94 PGSLPQVLAQA--TEMLYMRLDTMNTTCVDRFINWFSHHLSNFQFRWSWE---------- 141
Query: 433 DWKVDYESYDW 443
DW
Sbjct: 142 DWSDCLSQDPE 152
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.134 0.409
Gapped
Lambda K H
0.267 0.0508 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,853,006
Number of extensions: 88826
Number of successful extensions: 300
Number of sequences better than 10.0: 1
Number of HSP's gapped: 283
Number of HSP's successfully gapped: 53
Length of query: 480
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 391
Effective length of database: 1,185,626
Effective search space: 463579766
Effective search space used: 463579766
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.5 bits)