Your job contains 1 sequence.
>psy639
AEDRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFR
DKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAIPTNNMLMKETLP
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy639
(114 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|C9J330 - symbol:NCOR2 "Nuclear receptor corepre... 254 4.0e-21 1
UNIPROTKB|E7EVU5 - symbol:NCOR1 "Nuclear receptor corepre... 254 5.2e-21 1
UNIPROTKB|E7EW50 - symbol:NCOR1 "Nuclear receptor corepre... 254 5.4e-21 1
UNIPROTKB|J3KS51 - symbol:NCOR1 "Nuclear receptor corepre... 254 5.4e-21 1
UNIPROTKB|E9PGV6 - symbol:NCOR1 "Nuclear receptor corepre... 254 1.5e-20 1
UNIPROTKB|J9P1J2 - symbol:NCOR1 "Uncharacterized protein"... 254 3.0e-20 1
UNIPROTKB|C9JQE8 - symbol:NCOR2 "Nuclear receptor corepre... 254 3.0e-20 1
UNIPROTKB|F1RFN4 - symbol:F1RFN4 "Uncharacterized protein... 253 3.2e-20 1
UNIPROTKB|J9NUC7 - symbol:NCOR2 "Uncharacterized protein"... 253 3.7e-20 1
UNIPROTKB|F1SDC8 - symbol:NCOR1 "Uncharacterized protein"... 254 4.3e-20 1
UNIPROTKB|F1MGM4 - symbol:NCOR1 "Uncharacterized protein"... 254 5.6e-20 1
UNIPROTKB|O75376 - symbol:NCOR1 "Nuclear receptor corepre... 254 5.6e-20 1
UNIPROTKB|E2RKW5 - symbol:NCOR1 "Uncharacterized protein"... 254 5.6e-20 1
UNIPROTKB|F1LS83 - symbol:Ncor1 "Nuclear receptor corepre... 254 5.6e-20 1
MGI|MGI:1349717 - symbol:Ncor1 "nuclear receptor co-repre... 254 5.7e-20 1
UNIPROTKB|F1LS82 - symbol:Ncor1 "Nuclear receptor corepre... 254 5.7e-20 1
UNIPROTKB|F1LSA0 - symbol:Ncor1 "Nuclear receptor corepre... 254 5.7e-20 1
UNIPROTKB|C9JE98 - symbol:NCOR2 "Nuclear receptor corepre... 254 5.7e-20 1
UNIPROTKB|C9J239 - symbol:NCOR2 "Nuclear receptor corepre... 254 5.7e-20 1
MGI|MGI:1337080 - symbol:Ncor2 "nuclear receptor co-repre... 254 5.7e-20 1
RGD|1310293 - symbol:Ncor2 "nuclear receptor co-repressor... 254 5.7e-20 1
UNIPROTKB|C9J0Q5 - symbol:NCOR2 "Nuclear receptor corepre... 254 5.8e-20 1
UNIPROTKB|C9JFD3 - symbol:NCOR2 "Nuclear receptor corepre... 254 5.8e-20 1
UNIPROTKB|Q9Y618 - symbol:NCOR2 "Nuclear receptor corepre... 254 5.9e-20 1
UNIPROTKB|G3X7K5 - symbol:NCOR2 "Uncharacterized protein"... 253 6.7e-20 1
UNIPROTKB|F1PQQ7 - symbol:NCOR2 "Uncharacterized protein"... 253 7.4e-20 1
ZFIN|ZDB-GENE-040426-993 - symbol:ncor1 "nuclear receptor... 250 1.5e-19 1
UNIPROTKB|E1BSW5 - symbol:NCOR1 "Uncharacterized protein"... 248 2.5e-19 1
ZFIN|ZDB-GENE-030616-81 - symbol:ncor2 "nuclear receptor ... 246 3.8e-19 1
UNIPROTKB|F1RFN3 - symbol:LOC733643 "Uncharacterized prot... 202 1.5e-14 1
UNIPROTKB|C9J7T7 - symbol:NCOR2 "Nuclear receptor corepre... 202 1.6e-14 1
DICTYBASE|DDB_G0270560 - symbol:mybP "myb domain-containi... 162 1.9e-10 1
TAIR|locus:2100529 - symbol:AT3G52250 species:3702 "Arabi... 145 1.4e-08 1
SGD|S000000629 - symbol:SNT1 "Subunit of the Set3C deacet... 140 3.3e-08 1
POMBASE|SPAC22E12.19 - symbol:snt1 "Set3 complex subunit ... 127 3.8e-07 1
WB|WBGene00001565 - symbol:gei-8 species:6239 "Caenorhabd... 120 7.2e-06 1
UNIPROTKB|P34333 - symbol:gei-8 "Gex-3-interacting protei... 120 7.2e-06 1
ZFIN|ZDB-GENE-050208-795 - symbol:mier2 "mesoderm inducti... 111 9.7e-06 1
CGD|CAL0003554 - symbol:SNT1 species:5476 "Candida albica... 115 1.2e-05 1
UNIPROTKB|Q5A3N0 - symbol:SNT1 "Potential SET3 histone de... 115 1.2e-05 1
UNIPROTKB|A5PJX4 - symbol:MIER2 "Mesoderm induction early... 112 1.2e-05 1
UNIPROTKB|F1N3Q8 - symbol:MIER2 "Mesoderm induction early... 112 1.2e-05 1
UNIPROTKB|F1S5Q8 - symbol:MIER2 "Uncharacterized protein"... 112 1.2e-05 1
UNIPROTKB|H9L3B7 - symbol:H9L3B7 "Uncharacterized protein... 112 1.3e-05 1
UNIPROTKB|E1BF07 - symbol:ZNF541 "Uncharacterized protein... 112 3.6e-05 1
UNIPROTKB|F1MLU0 - symbol:ZNF541 "Uncharacterized protein... 112 3.6e-05 1
UNIPROTKB|F1S3J3 - symbol:LOC100153684 "Uncharacterized p... 88 3.9e-05 2
WB|WBGene00022278 - symbol:rcor-1 species:6239 "Caenorhab... 107 4.2e-05 1
UNIPROTKB|I3LLB8 - symbol:ZNF541 "Uncharacterized protein... 108 5.2e-05 1
UNIPROTKB|F1PNN3 - symbol:ZNF541 "Uncharacterized protein... 109 7.5e-05 1
UNIPROTKB|J9NY16 - symbol:ZNF541 "Uncharacterized protein... 109 7.6e-05 1
UNIPROTKB|J9NYD8 - symbol:ZNF541 "Uncharacterized protein... 109 7.7e-05 1
UNIPROTKB|F1PE97 - symbol:MIER2 "Uncharacterized protein"... 104 8.1e-05 1
MGI|MGI:1917677 - symbol:Mier2 "mesoderm induction early ... 104 8.4e-05 1
RGD|1307278 - symbol:Mier2 "mesoderm induction early resp... 104 8.5e-05 1
UNIPROTKB|Q8N344 - symbol:MIER2 "Mesoderm induction early... 104 8.5e-05 1
UNIPROTKB|E1BI11 - symbol:C10H14orf43 "Uncharacterized pr... 89 9.6e-05 2
UNIPROTKB|Q9H0D2 - symbol:ZNF541 "Zinc finger protein 541... 108 9.7e-05 1
UNIPROTKB|F1RLY4 - symbol:ZNF541 "Uncharacterized protein... 108 9.7e-05 1
UNIPROTKB|F1RLY3 - symbol:ZNF541 "Uncharacterized protein... 108 9.7e-05 1
UNIPROTKB|F1NVK5 - symbol:F1NVK5 "Uncharacterized protein... 103 0.00012 1
MGI|MGI:3647699 - symbol:Zfp541 "zinc finger protein 541"... 107 0.00012 1
UNIPROTKB|F6RU81 - symbol:ELMSAN1 "ELM2 and SANT domain-c... 89 0.00015 2
UNIPROTKB|Q6PJG2 - symbol:ELMSAN1 "ELM2 and SANT domain-c... 89 0.00015 2
UNIPROTKB|E2RQ12 - symbol:C14orf43 "Uncharacterized prote... 89 0.00017 2
WB|WBGene00005006 - symbol:spr-1 species:6239 "Caenorhabd... 101 0.00018 1
RGD|1310756 - symbol:Zfp541 "zinc finger protein 541" spe... 105 0.00019 1
UNIPROTKB|E1C1W0 - symbol:TRERF1 "Uncharacterized protein... 101 0.00045 1
DICTYBASE|DDB_G0293468 - symbol:mybS "myb domain-containi... 86 0.00069 2
>UNIPROTKB|C9J330 [details] [associations]
symbol:NCOR2 "Nuclear receptor corepressor 2" species:9606
"Homo sapiens" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0001012 "RNA polymerase II regulatory
region DNA binding" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003007 "heart morphogenesis"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0007595 "lactation" evidence=IEA] [GO:0010243 "response to
organic nitrogen" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=IEA] [GO:0021537 "telencephalon development"
evidence=IEA] [GO:0021846 "cell proliferation in forebrain"
evidence=IEA] [GO:0032355 "response to estradiol stimulus"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0035259 "glucocorticoid receptor binding" evidence=IEA]
[GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045599 "negative
regulation of fat cell differentiation" evidence=IEA] [GO:0046965
"retinoid X receptor binding" evidence=IEA] [GO:0050872 "white fat
cell differentiation" evidence=IEA] [GO:0060206 "estrous cycle
phase" evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
SMART:SM00717 GO:GO:0003714 GO:GO:0003007 GO:GO:0043565
GO:GO:0001701 GO:GO:0050872 GO:GO:0003682 GO:GO:0042593
SUPFAM:SSF46689 GO:GO:0000122 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0045599 GO:GO:0016604 GO:GO:0021846 GO:GO:0021537
GO:GO:0000118 EMBL:AC069261 EMBL:AC073916 HGNC:HGNC:7673
ChiTaRS:NCOR2 EMBL:AC073592 IPI:IPI00878709
ProteinModelPortal:C9J330 SMR:C9J330 STRING:C9J330
Ensembl:ENST00000420698 UCSC:uc001ugk.1 ArrayExpress:C9J330
Bgee:C9J330 Uniprot:C9J330
Length = 493
Score = 254 (94.5 bits), Expect = 4.0e-21, P = 4.0e-21
Identities = 48/100 (48%), Positives = 68/100 (68%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ L+VIPP++ D +FIN NG + D +DR MW++QE+E FR+K
Sbjct: 386 EKQMRQLAVIPPMLYDADQQRI--KFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREK 443
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAI 102
++ H KNFGLIASFLER+T ++CV YYYL+KK ENYK +
Sbjct: 444 FMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLV 483
>UNIPROTKB|E7EVU5 [details] [associations]
symbol:NCOR1 "Nuclear receptor corepressor 1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 HGNC:HGNC:7672
ChiTaRS:NCOR1 EMBL:AC002553 EMBL:AC005971 IPI:IPI00790393
ProteinModelPortal:E7EVU5 SMR:E7EVU5 PRIDE:E7EVU5
Ensembl:ENST00000436828 ArrayExpress:E7EVU5 Bgee:E7EVU5
Uniprot:E7EVU5
Length = 537
Score = 254 (94.5 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 49/103 (47%), Positives = 67/103 (65%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ LSVIPP++ D +FIN NG + D +DR +WT E+E+F+DK
Sbjct: 403 EKQMRQLSVIPPMMFDAEQRRV--KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDK 460
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAIPTN 105
+I H KNFGLIAS+LER++ DCV YYYL+KK ENYK + N
Sbjct: 461 FIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRN 503
>UNIPROTKB|E7EW50 [details] [associations]
symbol:NCOR1 "Nuclear receptor corepressor 1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 HGNC:HGNC:7672
ChiTaRS:NCOR1 EMBL:AC002553 EMBL:AC005971 IPI:IPI00793653
SMR:E7EW50 Ensembl:ENST00000411510 UCSC:uc010cpa.2 Uniprot:E7EW50
Length = 545
Score = 254 (94.5 bits), Expect = 5.4e-21, P = 5.4e-21
Identities = 49/103 (47%), Positives = 67/103 (65%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ LSVIPP++ D +FIN NG + D +DR +WT E+E+F+DK
Sbjct: 394 EKQMRQLSVIPPMMFDAEQRRV--KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDK 451
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAIPTN 105
+I H KNFGLIAS+LER++ DCV YYYL+KK ENYK + N
Sbjct: 452 FIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRN 494
>UNIPROTKB|J3KS51 [details] [associations]
symbol:NCOR1 "Nuclear receptor corepressor 1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 HGNC:HGNC:7672
ChiTaRS:NCOR1 EMBL:AC002553 EMBL:AC005971 Ensembl:ENST00000582357
Uniprot:J3KS51
Length = 546
Score = 254 (94.5 bits), Expect = 5.4e-21, P = 5.4e-21
Identities = 49/103 (47%), Positives = 67/103 (65%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ LSVIPP++ D +FIN NG + D +DR +WT E+E+F+DK
Sbjct: 403 EKQMRQLSVIPPMMFDAEQRRV--KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDK 460
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAIPTN 105
+I H KNFGLIAS+LER++ DCV YYYL+KK ENYK + N
Sbjct: 461 FIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRN 503
>UNIPROTKB|E9PGV6 [details] [associations]
symbol:NCOR1 "Nuclear receptor corepressor 1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 UniGene:Hs.462323 GeneID:9611 KEGG:hsa:9611
CTD:9611 HGNC:HGNC:7672 KO:K04650 ChiTaRS:NCOR1 GenomeRNAi:9611
NextBio:36055 EMBL:AC002553 EMBL:AC005971 IPI:IPI00793060
RefSeq:NP_001177367.1 ProteinModelPortal:E9PGV6 SMR:E9PGV6
PRIDE:E9PGV6 Ensembl:ENST00000395848 UCSC:uc002gpr.3
ArrayExpress:E9PGV6 Bgee:E9PGV6 Uniprot:E9PGV6
Length = 914
Score = 254 (94.5 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 49/103 (47%), Positives = 67/103 (65%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ LSVIPP++ D +FIN NG + D +DR +WT E+E+F+DK
Sbjct: 285 EKQMRQLSVIPPMMFDAEQRRV--KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDK 342
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAIPTN 105
+I H KNFGLIAS+LER++ DCV YYYL+KK ENYK + N
Sbjct: 343 FIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRN 385
>UNIPROTKB|J9P1J2 [details] [associations]
symbol:NCOR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GeneTree:ENSGT00550000074554 EMBL:AAEX03003692
EMBL:AAEX03003691 Ensembl:ENSCAFT00000049452 Uniprot:J9P1J2
Length = 1449
Score = 254 (94.5 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 49/103 (47%), Positives = 67/103 (65%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ LSVIPP++ D +FIN NG + D +DR +WT E+E+F+DK
Sbjct: 394 EKQMRQLSVIPPMMFDAEQRRV--KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDK 451
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAIPTN 105
+I H KNFGLIAS+LER++ DCV YYYL+KK ENYK + N
Sbjct: 452 FIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRN 494
>UNIPROTKB|C9JQE8 [details] [associations]
symbol:NCOR2 "Nuclear receptor corepressor 2" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 PDB:2L5G
PDBsum:2L5G HOGENOM:HOG000113746 EMBL:AC069261 EMBL:AC073916
HGNC:HGNC:7673 ChiTaRS:NCOR2 EMBL:AC073592 IPI:IPI01017993
ProteinModelPortal:C9JQE8 SMR:C9JQE8 STRING:C9JQE8 PRIDE:C9JQE8
Ensembl:ENST00000458234 ArrayExpress:C9JQE8 Bgee:C9JQE8
Uniprot:C9JQE8
Length = 1451
Score = 254 (94.5 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 48/100 (48%), Positives = 68/100 (68%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ L+VIPP++ D +FIN NG + D +DR MW++QE+E FR+K
Sbjct: 386 EKQMRQLAVIPPMLYDADQQRI--KFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREK 443
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAI 102
++ H KNFGLIASFLER+T ++CV YYYL+KK ENYK +
Sbjct: 444 FMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLV 483
Score = 100 (40.3 bits), Expect = 0.00074, P = 0.00074
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 47 QAKMWTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAIPTNN 106
++ WT++E E + + H +N+ IA + +T S C +Y+ KKR+N + +
Sbjct: 611 ESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHK 670
Query: 107 MLMKE 111
+ M++
Sbjct: 671 LKMEK 675
>UNIPROTKB|F1RFN4 [details] [associations]
symbol:F1RFN4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
GeneTree:ENSGT00550000074554 Ensembl:ENSSSCT00000010702 OMA:DERIENN
ArrayExpress:F1RFN4 Uniprot:F1RFN4
Length = 1262
Score = 253 (94.1 bits), Expect = 3.2e-20, P = 3.2e-20
Identities = 48/100 (48%), Positives = 68/100 (68%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ L+VIPP++ D +FIN NG + D +DR MW++QE+E FR+K
Sbjct: 375 EKQMRQLAVIPPMLYDADQQRI--KFINMNGLMDDPMKVYKDRQVMNMWSEQEKETFREK 432
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAI 102
++ H KNFGLIASFLER+T ++CV YYYL+KK ENYK +
Sbjct: 433 FMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLV 472
>UNIPROTKB|J9NUC7 [details] [associations]
symbol:NCOR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GeneTree:ENSGT00550000074554 EMBL:AAEX03014626
EMBL:AAEX03014627 EMBL:AAEX03014628 EMBL:AAEX03014629
EMBL:AAEX03014630 EMBL:AAEX03014631 Ensembl:ENSCAFT00000048752
Uniprot:J9NUC7
Length = 1409
Score = 253 (94.1 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 48/100 (48%), Positives = 68/100 (68%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ L+VIPP++ D +FIN NG + D +DR MW++QE+E FR+K
Sbjct: 386 EKQMRQLAVIPPMLYDADQQRI--KFINMNGLMDDPMKVYKDRQVMNMWSEQEKETFREK 443
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAI 102
++ H KNFGLIASFLER+T ++CV YYYL+KK ENYK +
Sbjct: 444 FMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLV 483
Score = 101 (40.6 bits), Expect = 0.00056, P = 0.00056
Identities = 21/85 (24%), Positives = 44/85 (51%)
Query: 30 NNNGRVTDYE-AEMR--DRAQAKMWTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCV 86
N+ +T + AE+ + ++ WT++E E + + H +N+ IA + +T S C
Sbjct: 591 NSEEAITPQQSAELASMEMNESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCK 650
Query: 87 EYYYLSKKRENYKRAIPTNNMLMKE 111
+Y+ KKR+N + + + M++
Sbjct: 651 NFYFNYKKRQNLDEILQQHKLKMEK 675
>UNIPROTKB|F1SDC8 [details] [associations]
symbol:NCOR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072368 "regulation of lipid transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0072362 "regulation of glycolysis by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0046966 "thyroid hormone receptor binding" evidence=IEA]
[GO:0046965 "retinoid X receptor binding" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0042632 "cholesterol
homeostasis" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0035033 "histone deacetylase
regulator activity" evidence=IEA] [GO:0032922 "circadian regulation
of gene expression" evidence=IEA] [GO:0031065 "positive regulation
of histone deacetylation" evidence=IEA] [GO:0021794 "thalamus
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA]
[GO:0014067 "negative regulation of phosphatidylinositol 3-kinase
cascade" evidence=IEA] [GO:0005876 "spindle microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0002361 "CD4-positive, CD25-positive, alpha-beta
regulatory T cell differentiation" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005737 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0043565 GO:GO:0040014 GO:GO:0003700 GO:GO:0003682
GO:GO:0042632 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0032922 GO:GO:0046329
GO:GO:0005876 GO:GO:0021794 GO:GO:0016580 GO:GO:0031065
GO:GO:0060318 GO:GO:0002361 GO:GO:0014067 GO:GO:0035033 OMA:PPMDRIT
GO:GO:0072362 GO:GO:0072368 GeneTree:ENSGT00550000074554
EMBL:CU467081 Ensembl:ENSSSCT00000019634 Uniprot:F1SDC8
Length = 1952
Score = 254 (94.5 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 49/103 (47%), Positives = 67/103 (65%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ LSVIPP++ D +FIN NG + D +DR +WT E+E+F+DK
Sbjct: 314 EKQMRQLSVIPPMMFDAEQRRV--KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDK 371
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAIPTN 105
+I H KNFGLIAS+LER++ DCV YYYL+KK ENYK + N
Sbjct: 372 FIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRN 414
>UNIPROTKB|F1MGM4 [details] [associations]
symbol:NCOR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072368 "regulation of lipid transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0072362 "regulation of glycolysis by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0046966 "thyroid hormone receptor binding" evidence=IEA]
[GO:0046965 "retinoid X receptor binding" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0042632 "cholesterol
homeostasis" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0035033 "histone deacetylase
regulator activity" evidence=IEA] [GO:0032922 "circadian regulation
of gene expression" evidence=IEA] [GO:0031065 "positive regulation
of histone deacetylation" evidence=IEA] [GO:0021794 "thalamus
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA]
[GO:0014067 "negative regulation of phosphatidylinositol 3-kinase
cascade" evidence=IEA] [GO:0005876 "spindle microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0002361 "CD4-positive, CD25-positive, alpha-beta
regulatory T cell differentiation" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005737 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0043565 GO:GO:0040014 GO:GO:0003700 GO:GO:0003682
GO:GO:0042632 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0032922 GO:GO:0046329
GO:GO:0005876 GO:GO:0021794 GO:GO:0016580 GO:GO:0031065
GO:GO:0060318 GO:GO:0002361 GO:GO:0014067 GO:GO:0035033 OMA:PPMDRIT
GO:GO:0072362 GO:GO:0072368 GeneTree:ENSGT00550000074554
EMBL:DAAA02048966 EMBL:DAAA02048965 IPI:IPI00923871
UniGene:Bt.48644 Ensembl:ENSBTAT00000061343 NextBio:20868163
ArrayExpress:F1MGM4 Uniprot:F1MGM4
Length = 2436
Score = 254 (94.5 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 49/103 (47%), Positives = 67/103 (65%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ LSVIPP++ D +FIN NG + D +DR +WT E+E+F+DK
Sbjct: 396 EKQMRQLSVIPPMMFDAEQRRV--KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDK 453
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAIPTN 105
+I H KNFGLIAS+LER++ DCV YYYL+KK ENYK + N
Sbjct: 454 FIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRN 496
>UNIPROTKB|O75376 [details] [associations]
symbol:NCOR1 "Nuclear receptor corepressor 1" species:9606
"Homo sapiens" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0002361
"CD4-positive, CD25-positive, alpha-beta regulatory T cell
differentiation" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0014067 "negative regulation of
phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0021794
"thalamus development" evidence=IEA] [GO:0031065 "positive
regulation of histone deacetylation" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0035033
"histone deacetylase regulator activity" evidence=IEA] [GO:0040014
"regulation of multicellular organism growth" evidence=IEA]
[GO:0042632 "cholesterol homeostasis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046965 "retinoid
X receptor binding" evidence=IEA] [GO:0046966 "thyroid hormone
receptor binding" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0051225 "spindle assembly"
evidence=IMP] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;TAS] [GO:0005876 "spindle
microtubule" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA;IMP] [GO:0046329 "negative regulation of JNK
cascade" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0044428 "nuclear part"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0007179 "transforming growth factor beta receptor
signaling pathway" evidence=TAS] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0044255 "cellular lipid metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0042826 "histone deacetylase binding" evidence=IPI] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISS]
[GO:0072362 "regulation of glycolysis by negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0016580 "Sin3
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IC]
[GO:2000191 "regulation of fatty acid transport" evidence=IC]
[GO:0072368 "regulation of lipid transport by negative regulation
of transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IPI] Reactome:REACT_71 Reactome:REACT_111217
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0048471 Reactome:REACT_111045 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0051225 GO:GO:0044281
GO:GO:0043565 GO:GO:0040014 GO:GO:0007219 GO:GO:0003700
GO:GO:0044255 GO:GO:0003682 GO:GO:0016568 GO:GO:0042632
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0044212
GO:GO:0000790 GO:GO:0021549 GO:GO:0007179 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0032922 eggNOG:NOG12793 GO:GO:0046329
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0005876
Reactome:REACT_24941 GO:GO:0021794 GO:GO:0031065 GO:GO:0060318
GO:GO:0002361 PDB:3H52 PDBsum:3H52 GO:GO:0014067 GO:GO:0035033
EMBL:AF044209 EMBL:AB028970 EMBL:CH471222 EMBL:BC167431
EMBL:AB019524 IPI:IPI00410351 IPI:IPI00939364 RefSeq:NP_001177369.1
RefSeq:NP_006302.2 UniGene:Hs.462323 PDB:2EQR PDB:3KMZ PDB:3N00
PDBsum:2EQR PDBsum:3KMZ PDBsum:3N00 ProteinModelPortal:O75376
SMR:O75376 DIP:DIP-29402N IntAct:O75376 MINT:MINT-205170
STRING:O75376 PhosphoSite:O75376 PaxDb:O75376 PRIDE:O75376
Ensembl:ENST00000268712 Ensembl:ENST00000395851 GeneID:9611
KEGG:hsa:9611 UCSC:uc002gpn.3 UCSC:uc002gpo.3 CTD:9611
GeneCards:GC17M015933 HGNC:HGNC:7672 MIM:600849 neXtProt:NX_O75376
PharmGKB:PA31477 HOGENOM:HOG000113746 HOVERGEN:HBG052587 KO:K04650
OMA:PPMDRIT OrthoDB:EOG4J6RQ2 PhylomeDB:O75376 ChiTaRS:NCOR1
EvolutionaryTrace:O75376 GenomeRNAi:9611 NextBio:36055
ArrayExpress:O75376 Bgee:O75376 CleanEx:HS_NCOR1
Genevestigator:O75376 GermOnline:ENSG00000141027 GO:GO:2000191
GO:GO:0072362 GO:GO:0072368 Uniprot:O75376
Length = 2440
Score = 254 (94.5 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 49/103 (47%), Positives = 67/103 (65%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ LSVIPP++ D +FIN NG + D +DR +WT E+E+F+DK
Sbjct: 394 EKQMRQLSVIPPMMFDAEQRRV--KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDK 451
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAIPTN 105
+I H KNFGLIAS+LER++ DCV YYYL+KK ENYK + N
Sbjct: 452 FIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRN 494
>UNIPROTKB|E2RKW5 [details] [associations]
symbol:NCOR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 OMA:PPMDRIT GeneTree:ENSGT00550000074554
EMBL:AAEX03003692 EMBL:AAEX03003691 Ensembl:ENSCAFT00000028704
Uniprot:E2RKW5
Length = 2444
Score = 254 (94.5 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 49/103 (47%), Positives = 67/103 (65%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ LSVIPP++ D +FIN NG + D +DR +WT E+E+F+DK
Sbjct: 394 EKQMRQLSVIPPMMFDAEQRRV--KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDK 451
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAIPTN 105
+I H KNFGLIAS+LER++ DCV YYYL+KK ENYK + N
Sbjct: 452 FIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRN 494
>UNIPROTKB|F1LS83 [details] [associations]
symbol:Ncor1 "Nuclear receptor corepressor 1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GeneTree:ENSGT00550000074554
IPI:IPI00764062 Ensembl:ENSRNOT00000057681 ArrayExpress:F1LS83
Uniprot:F1LS83
Length = 2445
Score = 254 (94.5 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 49/103 (47%), Positives = 67/103 (65%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ LSVIPP++ D +FIN NG + D +DR +WT E+E+F+DK
Sbjct: 395 EKQMRQLSVIPPMMFDAEQRRV--KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDK 452
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAIPTN 105
+I H KNFGLIAS+LER++ DCV YYYL+KK ENYK + N
Sbjct: 453 FIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRN 495
>MGI|MGI:1349717 [details] [associations]
symbol:Ncor1 "nuclear receptor co-repressor 1" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IGI;IMP] [GO:0000790
"nuclear chromatin" evidence=ISO] [GO:0001012 "RNA polymerase II
regulatory region DNA binding" evidence=ISO] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=ISO] [GO:0002361 "CD4-positive, CD25-positive, alpha-beta
regulatory T cell differentiation" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=ISO;IGI] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005876
"spindle microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0010629 "negative regulation of gene expression"
evidence=ISO] [GO:0014067 "negative regulation of
phosphatidylinositol 3-kinase cascade" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO;IPI] [GO:0019904 "protein domain
specific binding" evidence=ISO;IPI] [GO:0021794 "thalamus
development" evidence=IMP] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0031065 "positive regulation of histone
deacetylation" evidence=IDA] [GO:0032922 "circadian regulation of
gene expression" evidence=IGI] [GO:0035033 "histone deacetylase
regulator activity" evidence=IDA;IMP] [GO:0040014 "regulation of
multicellular organism growth" evidence=IGI] [GO:0042632
"cholesterol homeostasis" evidence=IMP] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0042974 "retinoic acid
receptor binding" evidence=ISO;IDA] [GO:0042975 "peroxisome
proliferator activated receptor binding" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0044428 "nuclear part" evidence=ISO;IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA;IMP]
[GO:0046329 "negative regulation of JNK cascade" evidence=ISO]
[GO:0046965 "retinoid X receptor binding" evidence=ISO;IDA]
[GO:0046966 "thyroid hormone receptor binding" evidence=IDA;IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0050790 "regulation of catalytic activity" evidence=IDA;IMP]
[GO:0051225 "spindle assembly" evidence=ISO] [GO:0060318
"definitive erythrocyte differentiation" evidence=IMP] [GO:0072362
"regulation of glycolysis by negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0072368
"regulation of lipid transport by negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
MGI:MGI:1349717 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0043565 GO:GO:0040014 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 GO:GO:0042632 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
Reactome:REACT_127416 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0032922 eggNOG:NOG12793 GO:GO:0046966 GO:GO:0046965
Reactome:REACT_27166 GO:GO:0021794 GO:GO:0031065 GO:GO:0060318
GO:GO:0002361 GO:GO:0014067 GO:GO:0035033 HOVERGEN:HBG052587
OrthoDB:EOG4J6RQ2 ChiTaRS:NCOR1 EMBL:U35312 EMBL:U22016
IPI:IPI00274795 IPI:IPI00620682 PIR:S60254 UniGene:Mm.271814
UniGene:Mm.460227 ProteinModelPortal:Q60974 SMR:Q60974
DIP:DIP-32548N IntAct:Q60974 MINT:MINT-2981744 STRING:Q60974
PhosphoSite:Q60974 PaxDb:Q60974 PRIDE:Q60974 InParanoid:Q60974
CleanEx:MM_NCOR1 Genevestigator:Q60974
GermOnline:ENSMUSG00000018501 Uniprot:Q60974
Length = 2453
Score = 254 (94.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 49/103 (47%), Positives = 67/103 (65%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ LSVIPP++ D +FIN NG + D +DR +WT E+E+F+DK
Sbjct: 394 EKQMRQLSVIPPMMFDAEQRRV--KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDK 451
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAIPTN 105
+I H KNFGLIAS+LER++ DCV YYYL+KK ENYK + N
Sbjct: 452 FIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRN 494
>UNIPROTKB|F1LS82 [details] [associations]
symbol:Ncor1 "Nuclear receptor corepressor 1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 OMA:PPMDRIT IPI:IPI00780719
GeneTree:ENSGT00550000074554 PRIDE:F1LS82
Ensembl:ENSRNOT00000057682 ArrayExpress:F1LS82 Uniprot:F1LS82
Length = 2453
Score = 254 (94.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 49/103 (47%), Positives = 67/103 (65%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ LSVIPP++ D +FIN NG + D +DR +WT E+E+F+DK
Sbjct: 395 EKQMRQLSVIPPMMFDAEQRRV--KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDK 452
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAIPTN 105
+I H KNFGLIAS+LER++ DCV YYYL+KK ENYK + N
Sbjct: 453 FIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRN 495
>UNIPROTKB|F1LSA0 [details] [associations]
symbol:Ncor1 "Nuclear receptor corepressor 1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717
GO:GO:0005737 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0043565 GO:GO:0040014 GO:GO:0003700 GO:GO:0003682
GO:GO:0042632 SUPFAM:SSF46689 GO:GO:0005667 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0032922 GO:GO:0046329 GO:GO:0005876
GO:GO:0021794 GO:GO:0016580 GO:GO:0031065 GO:GO:0060318
GO:GO:0002361 GO:GO:0014067 GO:GO:0035033 GO:GO:0072362
GO:GO:0072368 GeneTree:ENSGT00550000074554 IPI:IPI00959849
Ensembl:ENSRNOT00000057680 ArrayExpress:F1LSA0 Uniprot:F1LSA0
Length = 2456
Score = 254 (94.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 49/103 (47%), Positives = 67/103 (65%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ LSVIPP++ D +FIN NG + D +DR +WT E+E+F+DK
Sbjct: 395 EKQMRQLSVIPPMMFDAEQRRV--KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDK 452
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAIPTN 105
+I H KNFGLIAS+LER++ DCV YYYL+KK ENYK + N
Sbjct: 453 FIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRN 495
>UNIPROTKB|C9JE98 [details] [associations]
symbol:NCOR2 "Nuclear receptor corepressor 2" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 EMBL:AC069261
EMBL:AC073916 IPI:IPI00923531 RefSeq:NP_001070729.2
UniGene:Hs.137510 GeneID:9612 KEGG:hsa:9612 CTD:9612 HGNC:HGNC:7673
KO:K06065 ChiTaRS:NCOR2 GenomeRNAi:9612 NextBio:36061 EMBL:AC073592
ProteinModelPortal:C9JE98 SMR:C9JE98 STRING:C9JE98 PRIDE:C9JE98
Ensembl:ENST00000404621 UCSC:uc010tbc.2 ArrayExpress:C9JE98
Bgee:C9JE98 Uniprot:C9JE98
Length = 2458
Score = 254 (94.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 48/100 (48%), Positives = 68/100 (68%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ L+VIPP++ D +FIN NG + D +DR MW++QE+E FR+K
Sbjct: 385 EKQMRQLAVIPPMLYDADQQRI--KFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREK 442
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAI 102
++ H KNFGLIASFLER+T ++CV YYYL+KK ENYK +
Sbjct: 443 FMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLV 482
>UNIPROTKB|C9J239 [details] [associations]
symbol:NCOR2 "Nuclear receptor corepressor 2" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 EMBL:AC069261
EMBL:AC073916 IPI:IPI00923531 HGNC:HGNC:7673 ChiTaRS:NCOR2
EMBL:AC073592 ProteinModelPortal:C9J239 SMR:C9J239 STRING:C9J239
PRIDE:C9J239 Ensembl:ENST00000397355 UCSC:uc021rgb.1
ArrayExpress:C9J239 Bgee:C9J239 Uniprot:C9J239
Length = 2459
Score = 254 (94.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 48/100 (48%), Positives = 68/100 (68%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ L+VIPP++ D +FIN NG + D +DR MW++QE+E FR+K
Sbjct: 386 EKQMRQLAVIPPMLYDADQQRI--KFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREK 443
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAI 102
++ H KNFGLIASFLER+T ++CV YYYL+KK ENYK +
Sbjct: 444 FMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLV 483
>MGI|MGI:1337080 [details] [associations]
symbol:Ncor2 "nuclear receptor co-repressor 2" species:10090
"Mus musculus" [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IMP;IDA]
[GO:0000785 "chromatin" evidence=ISO] [GO:0001012 "RNA polymerase
II regulatory region DNA binding" evidence=ISO] [GO:0001701 "in
utero embryonic development" evidence=IMP] [GO:0003007 "heart
morphogenesis" evidence=IGI;IMP] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=ISO;IDA]
[GO:0003714 "transcription corepressor activity"
evidence=ISO;IGI;IDA;IMP] [GO:0005112 "Notch binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016604 "nuclear body"
evidence=ISO;IDA] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=ISO] [GO:0017053 "transcriptional repressor
complex" evidence=ISO] [GO:0021537 "telencephalon development"
evidence=IMP] [GO:0021846 "cell proliferation in forebrain"
evidence=IMP] [GO:0030900 "forebrain development" evidence=IMP]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0035259
"glucocorticoid receptor binding" evidence=ISO] [GO:0042593
"glucose homeostasis" evidence=IMP] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0042974 "retinoic acid
receptor binding" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045599 "negative regulation of fat cell
differentiation" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0046965
"retinoid X receptor binding" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0050872 "white fat cell
differentiation" evidence=IMP] [GO:0072365 "regulation of cellular
ketone metabolic process by negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 MGI:MGI:1337080
GO:GO:0003714 GO:GO:0003007 GO:GO:0043565 GO:GO:0001701
GO:GO:0050872 GO:GO:0006351 GO:GO:0003682 GO:GO:0042593
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
Reactome:REACT_127416 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0045599 eggNOG:NOG12793 GO:GO:0016604 GO:GO:0021846
GO:GO:0021537 Reactome:REACT_27166 GO:GO:0000118
HOGENOM:HOG000113746 HOVERGEN:HBG052587 CTD:9612 KO:K06065
ChiTaRS:NCOR2 EMBL:AF113001 EMBL:AF113002 EMBL:AF125671
EMBL:AC132118 EMBL:AC139377 IPI:IPI00123871 IPI:IPI00222492
RefSeq:NP_001240833.1 RefSeq:NP_001240834.1 UniGene:Mm.278646
UniGene:Mm.472258 ProteinModelPortal:Q9WU42 SMR:Q9WU42
MINT:MINT-3154743 STRING:Q9WU42 PhosphoSite:Q9WU42 PaxDb:Q9WU42
PRIDE:Q9WU42 Ensembl:ENSMUST00000111394 Ensembl:ENSMUST00000111398
GeneID:20602 KEGG:mmu:20602 UCSC:uc008zqv.1 UCSC:uc008zqx.1
GeneTree:ENSGT00550000074554 NextBio:298933 Bgee:Q9WU42
CleanEx:MM_NCOR2 Genevestigator:Q9WU42
GermOnline:ENSMUSG00000029478 Uniprot:Q9WU42
Length = 2472
Score = 254 (94.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 48/100 (48%), Positives = 68/100 (68%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ L+VIPP++ D +FIN NG + D +DR MW++QER+ FR+K
Sbjct: 386 EKQMRQLAVIPPMLYDADQQRI--KFINMNGLMDDPMKVYKDRQVTNMWSEQERDTFREK 443
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAI 102
++ H KNFGLIASFLER+T ++CV YYYL+KK ENYK +
Sbjct: 444 FMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLV 483
>RGD|1310293 [details] [associations]
symbol:Ncor2 "nuclear receptor co-repressor 2" species:10116
"Rattus norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000785
"chromatin" evidence=IDA] [GO:0001012 "RNA polymerase II regulatory
region DNA binding" evidence=IDA] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003007 "heart morphogenesis"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=ISO;IDA] [GO:0003714
"transcription corepressor activity" evidence=IEA;ISO] [GO:0005112
"Notch binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0007595
"lactation" evidence=IEP] [GO:0010243 "response to organic
nitrogen" evidence=IEP] [GO:0016604 "nuclear body"
evidence=IEA;ISO] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=IPI] [GO:0017053 "transcriptional repressor
complex" evidence=ISO] [GO:0021537 "telencephalon development"
evidence=IEA;ISO] [GO:0021846 "cell proliferation in forebrain"
evidence=IEA;ISO] [GO:0030900 "forebrain development" evidence=ISO]
[GO:0032355 "response to estradiol stimulus" evidence=IEP]
[GO:0032403 "protein complex binding" evidence=IPI] [GO:0035259
"glucocorticoid receptor binding" evidence=IPI] [GO:0042593
"glucose homeostasis" evidence=IEA;ISO] [GO:0042698 "ovulation
cycle" evidence=IEP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0042974 "retinoic acid receptor binding"
evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0045599 "negative regulation of fat cell
differentiation" evidence=IEA;ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0046965
"retinoid X receptor binding" evidence=IPI] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0050872 "white fat cell
differentiation" evidence=IEA;ISO] [GO:0060206 "estrous cycle
phase" evidence=IEP] [GO:0072365 "regulation of cellular ketone
metabolic process by negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 RGD:1310293 GO:GO:0005634 GO:GO:0032355 GO:GO:0000785
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CH473973
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0001012 GO:GO:0060206
GO:GO:0010243 GO:GO:0007595 CTD:9612 KO:K06065
GeneTree:ENSGT00550000074554 IPI:IPI00391441 RefSeq:NP_001101804.1
UniGene:Rn.113362 Ensembl:ENSRNOT00000001334 GeneID:360801
KEGG:rno:360801 UCSC:RGD:1310293 NextBio:674146 Uniprot:D3ZXN9
Length = 2472
Score = 254 (94.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 48/100 (48%), Positives = 68/100 (68%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ L+VIPP++ D +FIN NG + D +DR MW++QER+ FR+K
Sbjct: 386 EKQMRQLAVIPPMLYDADQQRI--KFINMNGLMDDPMKVYKDRQVTNMWSEQERDTFREK 443
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAI 102
++ H KNFGLIASFLER+T ++CV YYYL+KK ENYK +
Sbjct: 444 FMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLV 483
>UNIPROTKB|C9J0Q5 [details] [associations]
symbol:NCOR2 "Nuclear receptor corepressor 2" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
HOGENOM:HOG000113746 EMBL:AC069261 EMBL:AC073916
RefSeq:NP_001193583.1 UniGene:Hs.137510 GeneID:9612 KEGG:hsa:9612
CTD:9612 HGNC:HGNC:7673 KO:K06065 ChiTaRS:NCOR2 GenomeRNAi:9612
NextBio:36061 EMBL:AC073592 IPI:IPI00952657
ProteinModelPortal:C9J0Q5 SMR:C9J0Q5 STRING:C9J0Q5 PRIDE:C9J0Q5
Ensembl:ENST00000429285 UCSC:uc021rgc.1 ArrayExpress:C9J0Q5
Bgee:C9J0Q5 Uniprot:C9J0Q5
Length = 2504
Score = 254 (94.5 bits), Expect = 5.8e-20, P = 5.8e-20
Identities = 48/100 (48%), Positives = 68/100 (68%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ L+VIPP++ D +FIN NG + D +DR MW++QE+E FR+K
Sbjct: 385 EKQMRQLAVIPPMLYDADQQRI--KFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREK 442
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAI 102
++ H KNFGLIASFLER+T ++CV YYYL+KK ENYK +
Sbjct: 443 FMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLV 482
>UNIPROTKB|C9JFD3 [details] [associations]
symbol:NCOR2 "Nuclear receptor corepressor 2" species:9606
"Homo sapiens" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0001012 "RNA polymerase II regulatory
region DNA binding" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003007 "heart morphogenesis"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0007595 "lactation" evidence=IEA] [GO:0010243 "response to
organic nitrogen" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=IEA] [GO:0021537 "telencephalon development"
evidence=IEA] [GO:0021846 "cell proliferation in forebrain"
evidence=IEA] [GO:0032355 "response to estradiol stimulus"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0035259 "glucocorticoid receptor binding" evidence=IEA]
[GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045599 "negative
regulation of fat cell differentiation" evidence=IEA] [GO:0046965
"retinoid X receptor binding" evidence=IEA] [GO:0050872 "white fat
cell differentiation" evidence=IEA] [GO:0060206 "estrous cycle
phase" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0005634
GO:GO:0003714 GO:GO:0003007 GO:GO:0043565 GO:GO:0001701
GO:GO:0050872 GO:GO:0003682 GO:GO:0042593 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0045599 GO:GO:0016604 GO:GO:0021846 GO:GO:0021537
GO:GO:0000118 EMBL:AC069261 EMBL:AC073916 RefSeq:NP_006303.4
UniGene:Hs.137510 GeneID:9612 KEGG:hsa:9612 CTD:9612 HGNC:HGNC:7673
KO:K06065 ChiTaRS:NCOR2 GenomeRNAi:9612 NextBio:36061 EMBL:AC073592
IPI:IPI00952937 ProteinModelPortal:C9JFD3 SMR:C9JFD3 PRIDE:C9JFD3
Ensembl:ENST00000405201 UCSC:uc010tbb.2 ArrayExpress:C9JFD3
Bgee:C9JFD3 Uniprot:C9JFD3
Length = 2514
Score = 254 (94.5 bits), Expect = 5.8e-20, P = 5.8e-20
Identities = 48/100 (48%), Positives = 68/100 (68%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ L+VIPP++ D +FIN NG + D +DR MW++QE+E FR+K
Sbjct: 386 EKQMRQLAVIPPMLYDADQQRI--KFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREK 443
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAI 102
++ H KNFGLIASFLER+T ++CV YYYL+KK ENYK +
Sbjct: 444 FMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLV 483
>UNIPROTKB|Q9Y618 [details] [associations]
symbol:NCOR2 "Nuclear receptor corepressor 2" species:9606
"Homo sapiens" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005112 "Notch binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA;IMP;TAS] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0003714 "transcription corepressor activity"
evidence=IDA;IMP] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0044255 "cellular
lipid metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0017053 "transcriptional
repressor complex" evidence=IDA] [GO:0072365 "regulation of
cellular ketone metabolic process by negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_71
Reactome:REACT_111217 InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0044281
GO:GO:0003677 GO:GO:0007219 GO:GO:0044255 GO:GO:0003682
Pathway_Interaction_DB:rxr_vdr_pathway Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0007179 InterPro:IPR017884
PROSITE:PS51293 eggNOG:NOG12793
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016604 PDB:1R2B
PDBsum:1R2B PDB:2GPV PDBsum:2GPV PDB:2L5G PDBsum:2L5G PDB:4A69
PDBsum:4A69 PDB:2ODD PDBsum:2ODD HOVERGEN:HBG052587 EMBL:S83390
EMBL:AF113003 EMBL:AF125672 EMBL:AY965853 EMBL:AC069261
EMBL:AC073916 EMBL:AB209089 EMBL:U80750 EMBL:U80761 EMBL:U37146
IPI:IPI00001735 IPI:IPI00878336 IPI:IPI00923436 IPI:IPI00923531
IPI:IPI00923596 PIR:S60255 RefSeq:NP_001070729.2
RefSeq:NP_001193583.1 RefSeq:NP_006303.4 UniGene:Hs.137510 PDB:1KKQ
PDB:1XC5 PDB:2LTP PDB:3R29 PDB:3R2A PDBsum:1KKQ PDBsum:1XC5
PDBsum:2LTP PDBsum:3R29 PDBsum:3R2A ProteinModelPortal:Q9Y618
SMR:Q9Y618 DIP:DIP-951N IntAct:Q9Y618 MINT:MINT-129997
STRING:Q9Y618 PhosphoSite:Q9Y618 DMDM:226713806 PaxDb:Q9Y618
PRIDE:Q9Y618 Ensembl:ENST00000356219 GeneID:9612 KEGG:hsa:9612
UCSC:uc001ugj.1 UCSC:uc010tax.2 CTD:9612 GeneCards:GC12M124808
H-InvDB:HIX0026341 HGNC:HGNC:7673 HPA:HPA001928 MIM:600848
neXtProt:NX_Q9Y618 PharmGKB:PA31478 KO:K06065 BindingDB:Q9Y618
ChEMBL:CHEMBL5949 ChiTaRS:NCOR2 EvolutionaryTrace:Q9Y618
GenomeRNAi:9612 NextBio:36061 ArrayExpress:Q9Y618 Bgee:Q9Y618
CleanEx:HS_NCOR2 Genevestigator:Q9Y618 GermOnline:ENSG00000196498
GO:GO:0072365 Uniprot:Q9Y618
Length = 2525
Score = 254 (94.5 bits), Expect = 5.9e-20, P = 5.9e-20
Identities = 48/100 (48%), Positives = 68/100 (68%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ L+VIPP++ D +FIN NG + D +DR MW++QE+E FR+K
Sbjct: 386 EKQMRQLAVIPPMLYDADQQRI--KFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREK 443
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAI 102
++ H KNFGLIASFLER+T ++CV YYYL+KK ENYK +
Sbjct: 444 FMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLV 483
>UNIPROTKB|G3X7K5 [details] [associations]
symbol:NCOR2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050872 "white fat cell differentiation" evidence=IEA]
[GO:0045599 "negative regulation of fat cell differentiation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0042593 "glucose homeostasis" evidence=IEA]
[GO:0021846 "cell proliferation in forebrain" evidence=IEA]
[GO:0021537 "telencephalon development" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0003714
GO:GO:0003007 GO:GO:0043565 GO:GO:0001701 GO:GO:0050872
GO:GO:0003682 GO:GO:0042593 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000122 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0045599
GO:GO:0016604 GO:GO:0021846 GO:GO:0021537 GO:GO:0000118
GeneTree:ENSGT00550000074554 OMA:MHHNAAT EMBL:DAAA02045216
EMBL:DAAA02045217 EMBL:DAAA02045218 EMBL:DAAA02045219
EMBL:DAAA02045220 EMBL:DAAA02045221 EMBL:DAAA02045222
EMBL:DAAA02045223 Ensembl:ENSBTAT00000034273 Uniprot:G3X7K5
Length = 2294
Score = 253 (94.1 bits), Expect = 6.7e-20, P = 6.7e-20
Identities = 48/100 (48%), Positives = 68/100 (68%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ L+VIPP++ D +FIN NG + D +DR MW++QE+E FR+K
Sbjct: 222 EKQMRQLAVIPPMLYDADQQRI--KFINMNGLMDDPMKVYKDRQVMNMWSEQEKETFREK 279
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAI 102
++ H KNFGLIASFLER+T ++CV YYYL+KK ENYK +
Sbjct: 280 FMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLV 319
>UNIPROTKB|F1PQQ7 [details] [associations]
symbol:NCOR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GeneTree:ENSGT00550000074554 EMBL:AAEX03014626
EMBL:AAEX03014627 EMBL:AAEX03014628 EMBL:AAEX03014629
EMBL:AAEX03014630 EMBL:AAEX03014631 Ensembl:ENSCAFT00000011198
OMA:MHHNAAT Uniprot:F1PQQ7
Length = 2509
Score = 253 (94.1 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 48/100 (48%), Positives = 68/100 (68%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ L+VIPP++ D +FIN NG + D +DR MW++QE+E FR+K
Sbjct: 386 EKQMRQLAVIPPMLYDADQQRI--KFINMNGLMDDPMKVYKDRQVMNMWSEQEKETFREK 443
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAI 102
++ H KNFGLIASFLER+T ++CV YYYL+KK ENYK +
Sbjct: 444 FMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLV 483
>ZFIN|ZDB-GENE-040426-993 [details] [associations]
symbol:ncor1 "nuclear receptor co-repressor 1"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
ZFIN:ZDB-GENE-040426-993 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 OMA:PPMDRIT GeneTree:ENSGT00550000074554
EMBL:CR931763 EMBL:AL953908 IPI:IPI00489826
Ensembl:ENSDART00000097574 ArrayExpress:F1QWG8 Bgee:F1QWG8
Uniprot:F1QWG8
Length = 2409
Score = 250 (93.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 48/103 (46%), Positives = 67/103 (65%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ LSVIPP++ D +FIN NG + D + R +WT+ E+E+FR+K
Sbjct: 382 EKQMRQLSVIPPMMYDSEQRRV--KFINMNGLMDDPMKVYKSRQFMNVWTEHEKEIFREK 439
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAIPTN 105
++ H KNFGLIASFLER+ SDCV YYYL+KK +NYK + N
Sbjct: 440 FVQHPKNFGLIASFLERKCVSDCVLYYYLTKKSQNYKTLVRRN 482
>UNIPROTKB|E1BSW5 [details] [associations]
symbol:NCOR1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0001102
"RNA polymerase II activating transcription factor binding"
evidence=IEA] [GO:0002361 "CD4-positive, CD25-positive, alpha-beta
regulatory T cell differentiation" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0014067 "negative
regulation of phosphatidylinositol 3-kinase cascade" evidence=IEA]
[GO:0016580 "Sin3 complex" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0021794
"thalamus development" evidence=IEA] [GO:0031065 "positive
regulation of histone deacetylation" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0035033
"histone deacetylase regulator activity" evidence=IEA] [GO:0040014
"regulation of multicellular organism growth" evidence=IEA]
[GO:0042632 "cholesterol homeostasis" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046329 "negative
regulation of JNK cascade" evidence=IEA] [GO:0046965 "retinoid X
receptor binding" evidence=IEA] [GO:0046966 "thyroid hormone
receptor binding" evidence=IEA] [GO:0051225 "spindle assembly"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0072362 "regulation of glycolysis by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0072368 "regulation of lipid transport by
negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005737 GO:GO:0017053
GO:GO:0003714 GO:GO:0051225 GO:GO:0043565 GO:GO:0040014
GO:GO:0003700 GO:GO:0003682 GO:GO:0042632 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0032922 GO:GO:0046329 GO:GO:0005876 GO:GO:0016580
GO:GO:0031065 GO:GO:0014067 GO:GO:0035033 OMA:PPMDRIT GO:GO:0072362
GO:GO:0072368 GeneTree:ENSGT00550000074554 EMBL:AADN02025813
IPI:IPI00588780 Ensembl:ENSGALT00000007130 Uniprot:E1BSW5
Length = 2480
Score = 248 (92.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 47/103 (45%), Positives = 66/103 (64%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ LSVIPP++ D +FIN NG + D +DR +WT E+E+F++K
Sbjct: 397 EKQMRQLSVIPPMMFDAEQRRV--KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKEK 454
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAIPTN 105
++ H KNFGLIAS+LER+ DCV YYYL+KK ENYK + N
Sbjct: 455 FVQHPKNFGLIASYLERKNVPDCVLYYYLTKKNENYKALVRRN 497
>ZFIN|ZDB-GENE-030616-81 [details] [associations]
symbol:ncor2 "nuclear receptor co-repressor 2"
species:7955 "Danio rerio" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0030097 "hemopoiesis" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
ZFIN:ZDB-GENE-030616-81 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0030097 GeneTree:ENSGT00550000074554
EMBL:AL590153 EMBL:CABZ01054154 EMBL:CABZ01054155 EMBL:CABZ01054156
EMBL:CABZ01054157 IPI:IPI00932107 Ensembl:ENSDART00000051139
ArrayExpress:E7FF48 Bgee:E7FF48 Uniprot:E7FF48
Length = 2325
Score = 246 (91.7 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 46/100 (46%), Positives = 67/100 (67%)
Query: 3 DRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDK 62
+++ L+VIPP++ D +FIN NG + D +DR MW++QE++ FR+K
Sbjct: 384 EKQMRQLAVIPPMLFDAEQQRI--KFINMNGLMDDPMKVYKDRQVMNMWSEQEKDTFREK 441
Query: 63 YIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAI 102
+I H KNF LIASFLER+T ++CV +YYL+KK ENYK +
Sbjct: 442 FIQHPKNFALIASFLERKTVAECVLFYYLTKKNENYKNIV 481
>UNIPROTKB|F1RFN3 [details] [associations]
symbol:LOC733643 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GeneTree:ENSGT00550000074554 OMA:MHHNAAT
EMBL:AEMK01107266 EMBL:CT737269 EMBL:CU468470
Ensembl:ENSSSCT00000010703 ArrayExpress:F1RFN3 Uniprot:F1RFN3
Length = 2042
Score = 202 (76.2 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 34/53 (64%), Positives = 45/53 (84%)
Query: 50 MWTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAI 102
MW++QE+E FR+K++ H KNFGLIASFLER+T ++CV YYYL+KK ENYK +
Sbjct: 1 MWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLV 53
Score = 102 (41.0 bits), Expect = 0.00065, P = 0.00065
Identities = 22/85 (25%), Positives = 44/85 (51%)
Query: 30 NNNGRVTDYE-AEMR--DRAQAKMWTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCV 86
N+ VT + AE+ + ++ WT++E E + + H +N+ IA + +T S C
Sbjct: 158 NSEETVTPQQSAELASMEMNESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCK 217
Query: 87 EYYYLSKKRENYKRAIPTNNMLMKE 111
+Y+ KKR+N + + + M++
Sbjct: 218 NFYFNYKKRQNLDEILQQHKLKMEK 242
>UNIPROTKB|C9J7T7 [details] [associations]
symbol:NCOR2 "Nuclear receptor corepressor 2" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
HOGENOM:HOG000113746 EMBL:AC069261 EMBL:AC073916 HGNC:HGNC:7673
ChiTaRS:NCOR2 EMBL:AC073592 IPI:IPI00952657
ProteinModelPortal:C9J7T7 SMR:C9J7T7 STRING:C9J7T7 PRIDE:C9J7T7
Ensembl:ENST00000404121 OrthoDB:EOG4S4PF9 ArrayExpress:C9J7T7
Bgee:C9J7T7 Uniprot:C9J7T7
Length = 2075
Score = 202 (76.2 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 34/53 (64%), Positives = 45/53 (84%)
Query: 50 MWTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAI 102
MW++QE+E FR+K++ H KNFGLIASFLER+T ++CV YYYL+KK ENYK +
Sbjct: 1 MWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLV 53
>DICTYBASE|DDB_G0270560 [details] [associations]
symbol:mybP "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 dictyBase:DDB_G0270560 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003677
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 eggNOG:NOG12793 RefSeq:XP_646082.1
ProteinModelPortal:Q55DP9 EnsemblProtists:DDB0233335 GeneID:8617032
KEGG:ddi:DDB_G0270560 OMA:IYEENRD Uniprot:Q55DP9
Length = 1448
Score = 162 (62.1 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 32/97 (32%), Positives = 55/97 (56%)
Query: 6 RHSLSVIPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDKYIH 65
+ +++IPP++ P +IN+NG + D A+ + R +WT+ E++ F KY+
Sbjct: 1038 QQGVAIIPPML-SPEE--RNIHYINHNGFIVDPIAQEKQRKSLIIWTEDEKQKFVKKYLQ 1094
Query: 66 HQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAI 102
+ K F IASF + RT D + +YY +KK N K+ +
Sbjct: 1095 YPKKFSKIASFFDNRTTEDMIVFYYNNKKTLNLKQLL 1131
Score = 106 (42.4 bits), Expect = 0.00017, P = 0.00017
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 19 PRHPFTGPRFINNNGRVTDYEAEMRDRAQAKM-WTQQEREVFRDKYIHHQKNFGLIASFL 77
P P G +I D E +D+ + WT+ ERE+F H F LIA ++
Sbjct: 1338 PSSPLIGSLYIG------DKEYNNKDKESENLRWTEHERELFNIAVQKHGTQFNLIADYV 1391
Query: 78 ERRTPSDCVEYYYLSKKR 95
+ +T + C +YY SK++
Sbjct: 1392 QSKTGAQCRSFYYNSKRK 1409
>TAIR|locus:2100529 [details] [associations]
symbol:AT3G52250 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008380 "RNA
splicing" evidence=ISS] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 EMBL:CP002686
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 IPI:IPI00524249
RefSeq:NP_190793.2 UniGene:At.35314 PRIDE:F4J6V1
EnsemblPlants:AT3G52250.1 GeneID:824390 KEGG:ath:AT3G52250
OMA:SYGFWDG Uniprot:F4J6V1
Length = 1656
Score = 145 (56.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 29/85 (34%), Positives = 49/85 (57%)
Query: 12 IPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKMWTQQEREVFRDKYIHHQKNFG 71
+P +I D + RFI++NG + D ++R WT +E+E+F + H K+F
Sbjct: 830 MPAMILDEKERVMS-RFISSNGLIEDPCDVEKERTMINPWTSEEKEIFLNLLAMHGKDFK 888
Query: 72 LIASFLERRTPSDCVEYYYLSKKRE 96
IAS L ++T +DC++YYY + K +
Sbjct: 889 KIASSLTQKTTADCIDYYYKNHKSD 913
>SGD|S000000629 [details] [associations]
symbol:SNT1 "Subunit of the Set3C deacetylase complex"
species:4932 "Saccharomyces cerevisiae" [GO:0070210 "Rpd3L-Expanded
complex" evidence=IDA] [GO:0032874 "positive regulation of
stress-activated MAPK cascade" evidence=IMP] [GO:0045835 "negative
regulation of meiosis" evidence=IPI] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0034967 "Set3 complex"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
SGD:S000000629 GO:GO:0006355 GO:GO:0003677 EMBL:X59720
EMBL:BK006937 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 eggNOG:NOG12793
InterPro:IPR017930 PROSITE:PS51294 GO:GO:0070210 GO:GO:0016575
EMBL:X59075 EMBL:S78624 GO:GO:0032874 GO:GO:0034967 GO:GO:0045835
GeneTree:ENSGT00550000074554 InterPro:IPR007137 Pfam:PF03990
PIR:S15053 RefSeq:NP_009962.2 ProteinModelPortal:P25357 SMR:P25357
DIP:DIP-2082N IntAct:P25357 MINT:MINT-495459 STRING:P25357
PaxDb:P25357 PeptideAtlas:P25357 PRIDE:P25357 EnsemblFungi:YCR033W
GeneID:850399 KEGG:sce:YCR033W CYGD:YCR033w OMA:FVDDAEM
OrthoDB:EOG4D82FN NextBio:965932 Genevestigator:P25357
GermOnline:YCR033W Uniprot:P25357
Length = 1226
Score = 140 (54.3 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 35/106 (33%), Positives = 57/106 (53%)
Query: 10 SVIPPIICDP--RHPFTGPRFINNNGRVTDYE--AEMRDRAQAKMWTQQEREVFRDKYIH 65
+ IPP+I DP +H + +F + N VTD + A + + +T E +F + Y+
Sbjct: 631 ATIPPLILDPIRKHSY---KFCDVNNLVTDKKLWASRILKDASDNFTDHEHSLFLEGYLI 687
Query: 66 HQKNFGLIASFLER-RTPSDCVEYYYLSKKRENYKRAIPTNNMLMK 110
H K FG I+ ++ R+P +CV +YY +KK NYK+ + N K
Sbjct: 688 HPKKFGKISHYMGGLRSPEECVLHYYRTKKTVNYKQLLIDKNKKRK 733
>POMBASE|SPAC22E12.19 [details] [associations]
symbol:snt1 "Set3 complex subunit Snt1" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IPI] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0034967 "Set3 complex" evidence=IDA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IDA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 PomBase:SPAC22E12.19
EMBL:CU329670 GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0070210 GO:GO:0016575
GO:GO:0034967 OrthoDB:EOG4D82FN EMBL:AB027908 PIR:T38176
RefSeq:NP_594845.2 ProteinModelPortal:Q10369 STRING:Q10369
EnsemblFungi:SPAC22E12.19.1 GeneID:2541792 KEGG:spo:SPAC22E12.19
NextBio:20802880 Uniprot:Q10369
Length = 661
Score = 127 (49.8 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 30/111 (27%), Positives = 54/111 (48%)
Query: 9 LSVIPPIICDPRHPFTGPRFINNNGR-VTDYEAEMRDRAQAKMWTQQEREVFRDKYIHHQ 67
++ IPP+I ++ N+ R VTD ++ +W +++ +F ++I H
Sbjct: 210 IATIPPMILSEEE--VKSQYFNDQSRLVTDCPKFYHFQSMPDIWNEEQHSIFVQQFILHG 267
Query: 68 KNFGLIASFLERRTPSDCVEYYYLSKKRENYKR----AIPTNNMLMKETLP 114
K FG IA + + +CV +YYL+K+ +Y+ A T K+ LP
Sbjct: 268 KKFGKIAEAVPGKNSKECVLHYYLTKRTTDYRALVASATKTKGRRRKKLLP 318
>WB|WBGene00001565 [details] [associations]
symbol:gei-8 species:6239 "Caenorhabditis elegans"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001005 InterPro:IPR009057
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR017877 PROSITE:PS50090 EMBL:FO080531 PIR:S44758
PIR:S44759 RefSeq:NP_498772.2 RefSeq:NP_498773.3 RefSeq:NP_741245.2
UniGene:Cel.22961 ProteinModelPortal:P34333 SMR:P34333
DIP:DIP-24789N IntAct:P34333 MINT:MINT-1101124 PaxDb:P34333
PRIDE:P34333 GeneID:176145 KEGG:cel:CELE_C14B9.6 UCSC:C14B9.6c
CTD:176145 WormBase:C14B9.6a WormBase:C14B9.6b WormBase:C14B9.6c
eggNOG:NOG289203 OMA:VAVKFCT NextBio:891320 Uniprot:P34333
Length = 1866
Score = 120 (47.3 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 28/103 (27%), Positives = 52/103 (50%)
Query: 1 AEDRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVT-DYEAEMRDRAQAKM--WTQQERE 57
A+ + R ++ IP ++ + F+ G + D + E R ++ W+ +ER
Sbjct: 167 ADKKIRLGVAKIPRLLTESERKMD--EFVERPGSILKDMKKEHRQSVLDRLEEWSPEERS 224
Query: 58 VFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKR 100
+F+ + H K F + F +T SD V +YY++KK E+YK+
Sbjct: 225 LFKSRQADHVKIFHGLTEFFVDKTASDLVLFYYMNKKTEDYKK 267
>UNIPROTKB|P34333 [details] [associations]
symbol:gei-8 "Gex-3-interacting protein 8" species:6239
"Caenorhabditis elegans" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017877 PROSITE:PS50090 EMBL:FO080531
PIR:S44758 PIR:S44759 RefSeq:NP_498772.2 RefSeq:NP_498773.3
RefSeq:NP_741245.2 UniGene:Cel.22961 ProteinModelPortal:P34333
SMR:P34333 DIP:DIP-24789N IntAct:P34333 MINT:MINT-1101124
PaxDb:P34333 PRIDE:P34333 GeneID:176145 KEGG:cel:CELE_C14B9.6
UCSC:C14B9.6c CTD:176145 WormBase:C14B9.6a WormBase:C14B9.6b
WormBase:C14B9.6c eggNOG:NOG289203 OMA:VAVKFCT NextBio:891320
Uniprot:P34333
Length = 1866
Score = 120 (47.3 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 28/103 (27%), Positives = 52/103 (50%)
Query: 1 AEDRRRHSLSVIPPIICDPRHPFTGPRFINNNGRVT-DYEAEMRDRAQAKM--WTQQERE 57
A+ + R ++ IP ++ + F+ G + D + E R ++ W+ +ER
Sbjct: 167 ADKKIRLGVAKIPRLLTESERKMD--EFVERPGSILKDMKKEHRQSVLDRLEEWSPEERS 224
Query: 58 VFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKR 100
+F+ + H K F + F +T SD V +YY++KK E+YK+
Sbjct: 225 LFKSRQADHVKIFHGLTEFFVDKTASDLVLFYYMNKKTEDYKK 267
>ZFIN|ZDB-GENE-050208-795 [details] [associations]
symbol:mier2 "mesoderm induction early response 1,
family member 2" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717
ZFIN:ZDB-GENE-050208-795 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GeneTree:ENSGT00510000046482 EMBL:BX569795 IPI:IPI00485143
Ensembl:ENSDART00000105550 Ensembl:ENSDART00000136374
Uniprot:F1Q4S8
Length = 406
Score = 111 (44.1 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 51 WTQQEREVFRDKYIHHQKNFGLI-ASFLERRTPSDCVEYYYLSKKRENYK 99
W+++ER F + H KNF LI A+ + R+ +CVEYYY+ KK E ++
Sbjct: 269 WSEEERRYFEHGFRAHGKNFNLIQANKVRTRSVGECVEYYYMWKKSERHE 318
>CGD|CAL0003554 [details] [associations]
symbol:SNT1 species:5476 "Candida albicans" [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0034967 "Set3 complex" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0045835 "negative regulation of meiosis"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0032874 "positive regulation of
stress-activated MAPK cascade" evidence=IEA] [GO:0016575 "histone
deacetylation" evidence=IEA] [GO:0009267 "cellular response to
starvation" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
CGD:CAL0003554 GO:GO:0005634 GO:GO:0071216 GO:GO:0036180
GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF46689 GO:GO:0009267
InterPro:IPR017884 PROSITE:PS51293 eggNOG:NOG12793 GO:GO:0036170
GO:GO:1900429 EMBL:AACQ01000071 RefSeq:XP_716310.1
ProteinModelPortal:Q5A3N0 GeneID:3642033 KEGG:cal:CaO19.5241
Uniprot:Q5A3N0
Length = 1001
Score = 115 (45.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 31/95 (32%), Positives = 52/95 (54%)
Query: 12 IPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKM---WTQQEREVFRDKYIHHQK 68
IP +I DP F+++N V D + E R + ++++E E+F + + H K
Sbjct: 644 IPDMILDPVKR-DKVLFMDSNNIVRD-KNEWAQRVKHDFMNNFSEREHELFCEGFCLHPK 701
Query: 69 NFGLIASFLER-RTPSDCVEYYYLSKKRENYKRAI 102
FG IA + R+ S+CV +YY++KK+ NYK +
Sbjct: 702 RFGAIARHMGGLRSASECVVHYYMTKKKVNYKELL 736
>UNIPROTKB|Q5A3N0 [details] [associations]
symbol:SNT1 "Potential SET3 histone deacetylase complex
component Snt1p" species:237561 "Candida albicans SC5314"
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP] [GO:1900429
"negative regulation of filamentous growth of a population of
unicellular organisms" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 CGD:CAL0003554
GO:GO:0005634 GO:GO:0071216 GO:GO:0036180 GO:GO:0003677
GO:GO:0003682 SUPFAM:SSF46689 GO:GO:0009267 InterPro:IPR017884
PROSITE:PS51293 eggNOG:NOG12793 GO:GO:0036170 GO:GO:1900429
EMBL:AACQ01000071 RefSeq:XP_716310.1 ProteinModelPortal:Q5A3N0
GeneID:3642033 KEGG:cal:CaO19.5241 Uniprot:Q5A3N0
Length = 1001
Score = 115 (45.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 31/95 (32%), Positives = 52/95 (54%)
Query: 12 IPPIICDPRHPFTGPRFINNNGRVTDYEAEMRDRAQAKM---WTQQEREVFRDKYIHHQK 68
IP +I DP F+++N V D + E R + ++++E E+F + + H K
Sbjct: 644 IPDMILDPVKR-DKVLFMDSNNIVRD-KNEWAQRVKHDFMNNFSEREHELFCEGFCLHPK 701
Query: 69 NFGLIASFLER-RTPSDCVEYYYLSKKRENYKRAI 102
FG IA + R+ S+CV +YY++KK+ NYK +
Sbjct: 702 RFGAIARHMGGLRSASECVVHYYMTKKKVNYKELL 736
>UNIPROTKB|A5PJX4 [details] [associations]
symbol:MIER2 "Mesoderm induction early response protein 2"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 SMART:SM00717 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448
PROSITE:PS51156 HOGENOM:HOG000015798 HOVERGEN:HBG052923
EMBL:BC142273 IPI:IPI00854559 RefSeq:NP_001092496.1
UniGene:Bt.11141 ProteinModelPortal:A5PJX4 PRIDE:A5PJX4
GeneID:523726 KEGG:bta:523726 CTD:54531 eggNOG:NOG301840
NextBio:20873811 Uniprot:A5PJX4
Length = 561
Score = 112 (44.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 51 WTQQEREVFRDKYIHHQKNFGLI-ASFLERRTPSDCVEYYYLSKKRENY 98
W+++ER F + H KNF LI A+ + R+ +CVEYYYL KK E Y
Sbjct: 302 WSEEERRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERY 350
>UNIPROTKB|F1N3Q8 [details] [associations]
symbol:MIER2 "Mesoderm induction early response protein 2"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GeneTree:ENSGT00510000046482 IPI:IPI00854559 UniGene:Bt.11141
OMA:SQQTRLG EMBL:DAAA02020213 Ensembl:ENSBTAT00000026341
ArrayExpress:F1N3Q8 Uniprot:F1N3Q8
Length = 561
Score = 112 (44.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 51 WTQQEREVFRDKYIHHQKNFGLI-ASFLERRTPSDCVEYYYLSKKRENY 98
W+++ER F + H KNF LI A+ + R+ +CVEYYYL KK E Y
Sbjct: 302 WSEEERRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERY 350
>UNIPROTKB|F1S5Q8 [details] [associations]
symbol:MIER2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GeneTree:ENSGT00510000046482 OMA:SQQTRLG EMBL:CU984591
Ensembl:ENSSSCT00000015295 Uniprot:F1S5Q8
Length = 562
Score = 112 (44.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 51 WTQQEREVFRDKYIHHQKNFGLI-ASFLERRTPSDCVEYYYLSKKRENY 98
W+++ER F + H KNF LI A+ + R+ +CVEYYYL KK E Y
Sbjct: 302 WSEEERRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERY 350
>UNIPROTKB|H9L3B7 [details] [associations]
symbol:H9L3B7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448
PROSITE:PS51156 GeneTree:ENSGT00530000063277 EMBL:AADN02024517
EMBL:AADN02024518 EMBL:AADN02024519 Ensembl:ENSGALT00000036197
OMA:KAESELI Uniprot:H9L3B7
Length = 573
Score = 112 (44.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 50 MWTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKK 94
+WT ER++FR+ + H+K+F LI ++ + S CVEYYY+ KK
Sbjct: 414 VWTPVERQLFRNAFHAHKKDFYLIQKKVQTKNVSQCVEYYYIWKK 458
>UNIPROTKB|E1BF07 [details] [associations]
symbol:ZNF541 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR007087 InterPro:IPR009057
InterPro:IPR013087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 SMART:SM00717 GO:GO:0005634
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 SUPFAM:SSF46689
Gene3D:3.30.160.60 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GeneTree:ENSGT00530000063277 EMBL:DAAA02047419 IPI:IPI00705012
Ensembl:ENSBTAT00000016738 Uniprot:E1BF07
Length = 1352
Score = 112 (44.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 50 MWTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKK 94
+WT E+ +F+ + H+K+F LI ++ +T + CVEYYY+ KK
Sbjct: 1164 IWTPMEKRLFKKAFCAHKKDFNLIHKTIQTKTVAQCVEYYYIWKK 1208
>UNIPROTKB|F1MLU0 [details] [associations]
symbol:ZNF541 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR007087 InterPro:IPR009057
InterPro:IPR013087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 SMART:SM00717 GO:GO:0005634
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 SUPFAM:SSF46689
Gene3D:3.30.160.60 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GeneTree:ENSGT00530000063277 OMA:RNLPGCP EMBL:DAAA02047419
IPI:IPI00924257 Ensembl:ENSBTAT00000061246 Uniprot:F1MLU0
Length = 1363
Score = 112 (44.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 50 MWTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKK 94
+WT E+ +F+ + H+K+F LI ++ +T + CVEYYY+ KK
Sbjct: 1175 IWTPMEKRLFKKAFCAHKKDFNLIHKTIQTKTVAQCVEYYYIWKK 1219
>UNIPROTKB|F1S3J3 [details] [associations]
symbol:LOC100153684 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR007087 InterPro:IPR009057
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
GO:GO:0003682 SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GeneTree:ENSGT00530000063277 EMBL:CT943655 RefSeq:XP_001926219.3
Ensembl:ENSSSCT00000002609 GeneID:100153684 KEGG:ssc:100153684
OMA:RINIGQH Uniprot:F1S3J3
Length = 518
Score = 88 (36.0 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 51 WTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKKR 95
W ER++F ++K+F L+ ++ +T + CVE+YY KK+
Sbjct: 247 WKAAERKLFNKGIAIYKKDFFLVQKLIQTKTVAQCVEFYYTYKKQ 291
Score = 40 (19.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 5 RRHSLSVIPPI--ICDPRHPFT-GPRFINNNGRVTDYEAE---MRDRAQA 48
R +S V PP+ + P + PR IN R ++AE MRDRA A
Sbjct: 111 RSNSAEVTPPVLSVMGEATPVSIEPR-INVGSR---FQAEIPLMRDRALA 156
>WB|WBGene00022278 [details] [associations]
symbol:rcor-1 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR000679 InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00320 PROSITE:PS50114 SMART:SM00717 GO:GO:0005634
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0003682
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GeneTree:ENSGT00550000074554 EMBL:FO080986 eggNOG:NOG326181
GeneID:171592 KEGG:cel:CELE_Y74C9A.4 CTD:171592 RefSeq:NP_490662.1
ProteinModelPortal:Q95Y41 SMR:Q95Y41 PaxDb:Q95Y41
EnsemblMetazoa:Y74C9A.4b UCSC:Y74C9A.4b WormBase:Y74C9A.4b
InParanoid:Q95Y41 OMA:NTCRMTR NextBio:871931 ArrayExpress:Q95Y41
Uniprot:Q95Y41
Length = 564
Score = 107 (42.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 30/95 (31%), Positives = 47/95 (49%)
Query: 22 PFTGPRFINNNGRVTDYEAEMRDRAQAKM----WTQQEREVFRDKYIHHQKNFGLIASFL 77
P FI N + D++A M + K WT +E +F + H K F I + +
Sbjct: 164 PIDRALFILNK-QSNDFDAAMVQAMRRKEIHDDWTAEEISLFSTCFFHFGKRFKKIHAAM 222
Query: 78 ERRTPSDCVEYYYLSKKRENYKRAIPTNNMLMKET 112
+R+ S ++YYY +KK +NYK I N+ + ET
Sbjct: 223 PQRSLSSIIQYYYNTKKVQNYKTMI---NVHLNET 254
>UNIPROTKB|I3LLB8 [details] [associations]
symbol:ZNF541 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR007087 InterPro:IPR009057
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
GO:GO:0003682 SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GeneTree:ENSGT00530000063277 EMBL:FP104555
Ensembl:ENSSSCT00000027913 Uniprot:I3LLB8
Length = 801
Score = 108 (43.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 51 WTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKK 94
WT E+ +F+ + H+K+F LI ++ +T + CVEYYY+ KK
Sbjct: 613 WTPMEKRLFKKAFCAHKKDFYLIHKTIQTKTVAQCVEYYYIWKK 656
>UNIPROTKB|F1PNN3 [details] [associations]
symbol:ZNF541 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR007087 InterPro:IPR009057
InterPro:IPR013087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 SMART:SM00717 GO:GO:0005634
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 SUPFAM:SSF46689
Gene3D:3.30.160.60 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GeneTree:ENSGT00530000063277 EMBL:AAEX03000832
Ensembl:ENSCAFT00000006566 Uniprot:F1PNN3
Length = 1360
Score = 109 (43.4 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 50 MWTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKK 94
+WT E+ +F+ + H+K+F LI ++ +T + CVEYYY+ KK
Sbjct: 1171 IWTPMEKRLFKKAFCAHKKDFYLIHKTIQTKTVAQCVEYYYIWKK 1215
>UNIPROTKB|J9NY16 [details] [associations]
symbol:ZNF541 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR007087 InterPro:IPR009057
InterPro:IPR013087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 SMART:SM00717 GO:GO:0005634
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 SUPFAM:SSF46689
Gene3D:3.30.160.60 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GeneTree:ENSGT00530000063277 EMBL:AAEX03000832
Ensembl:ENSCAFT00000044786 Uniprot:J9NY16
Length = 1375
Score = 109 (43.4 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 50 MWTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKK 94
+WT E+ +F+ + H+K+F LI ++ +T + CVEYYY+ KK
Sbjct: 1186 IWTPMEKRLFKKAFCAHKKDFYLIHKTIQTKTVAQCVEYYYIWKK 1230
>UNIPROTKB|J9NYD8 [details] [associations]
symbol:ZNF541 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR007087 InterPro:IPR009057
InterPro:IPR013087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 SMART:SM00717 GO:GO:0005634
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 SUPFAM:SSF46689
Gene3D:3.30.160.60 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GeneTree:ENSGT00530000063277 OMA:RNLPGCP EMBL:AAEX03000832
Ensembl:ENSCAFT00000045523 Uniprot:J9NYD8
Length = 1378
Score = 109 (43.4 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 50 MWTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKK 94
+WT E+ +F+ + H+K+F LI ++ +T + CVEYYY+ KK
Sbjct: 1189 IWTPMEKRLFKKAFCAHKKDFYLIHKTIQTKTVAQCVEYYYIWKK 1233
>UNIPROTKB|F1PE97 [details] [associations]
symbol:MIER2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448
PROSITE:PS51156 GeneTree:ENSGT00510000046482 OMA:SQQTRLG
EMBL:AAEX03012675 Ensembl:ENSCAFT00000031374 Uniprot:F1PE97
Length = 526
Score = 104 (41.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 51 WTQQEREVFRDKYIHHQKNFGLI-ASFLERRTPSDCVEYYYLSKKRENY 98
W+++E F + H KNF LI A+ + R+ +CVEYYYL KK E Y
Sbjct: 266 WSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERY 314
>MGI|MGI:1917677 [details] [associations]
symbol:Mier2 "mesoderm induction early response 1, family
member 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717
MGI:MGI:1917677 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
HOGENOM:HOG000015798 HOVERGEN:HBG052923
GeneTree:ENSGT00510000046482 CTD:54531 eggNOG:NOG301840 HSSP:Q924K8
OMA:SQQTRLG OrthoDB:EOG4HX50R EMBL:AK154672 EMBL:AK173128
EMBL:BC067013 EMBL:BC080757 EMBL:BC083321 IPI:IPI00421153
IPI:IPI00881906 IPI:IPI00882151 RefSeq:NP_081698.2
UniGene:Mm.334193 ProteinModelPortal:Q3U3N0 SMR:Q3U3N0
PhosphoSite:Q3U3N0 PRIDE:Q3U3N0 DNASU:70427
Ensembl:ENSMUST00000062855 Ensembl:ENSMUST00000165028 GeneID:70427
KEGG:mmu:70427 UCSC:uc007fyw.1 UCSC:uc007fyy.1 InParanoid:Q3U3N0
NextBio:331599 Bgee:Q3U3N0 Genevestigator:Q3U3N0 Uniprot:Q3U3N0
Length = 541
Score = 104 (41.7 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 51 WTQQEREVFRDKYIHHQKNFGLI-ASFLERRTPSDCVEYYYLSKKRENY 98
W+++E F + H KNF LI A+ + R+ +CVEYYYL KK E Y
Sbjct: 301 WSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERY 349
>RGD|1307278 [details] [associations]
symbol:Mier2 "mesoderm induction early response 1, family member
2" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 SMART:SM00717 RGD:1307278 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
OMA:SQQTRLG IPI:IPI00869700 Ensembl:ENSRNOT00000000191
UCSC:RGD:1307278 ArrayExpress:F1LVW6 Uniprot:F1LVW6
Length = 544
Score = 104 (41.7 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 51 WTQQEREVFRDKYIHHQKNFGLI-ASFLERRTPSDCVEYYYLSKKRENY 98
W+++E F + H KNF LI A+ + R+ +CVEYYYL KK E Y
Sbjct: 300 WSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERY 348
>UNIPROTKB|Q8N344 [details] [associations]
symbol:MIER2 "Mesoderm induction early response protein 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 SMART:SM00717 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448
PROSITE:PS51156 HOGENOM:HOG000015798 HOVERGEN:HBG052923 CTD:54531
eggNOG:NOG301840 EMBL:BC028203 EMBL:AB033019 IPI:IPI00297301
RefSeq:NP_060020.1 UniGene:Hs.101891 HSSP:Q924K8
ProteinModelPortal:Q8N344 SMR:Q8N344 IntAct:Q8N344
PhosphoSite:Q8N344 PRIDE:Q8N344 Ensembl:ENST00000264819
GeneID:54531 KEGG:hsa:54531 UCSC:uc002lok.1 GeneCards:GC19M000257
H-InvDB:HIX0014549 HGNC:HGNC:29210 neXtProt:NX_Q8N344
PharmGKB:PA134925804 InParanoid:Q8N344 OMA:SQQTRLG
OrthoDB:EOG4HX50R PhylomeDB:Q8N344 GenomeRNAi:54531 NextBio:56944
Bgee:Q8N344 CleanEx:HS_MIER2 Genevestigator:Q8N344 Uniprot:Q8N344
Length = 545
Score = 104 (41.7 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 51 WTQQEREVFRDKYIHHQKNFGLI-ASFLERRTPSDCVEYYYLSKKRENY 98
W+++E F + H KNF LI A+ + R+ +CVEYYYL KK E Y
Sbjct: 302 WSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERY 350
>UNIPROTKB|E1BI11 [details] [associations]
symbol:C10H14orf43 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448
PROSITE:PS51156 OMA:PDMNPEL GeneTree:ENSGT00530000063277
EMBL:DAAA02029601 IPI:IPI00709490 Ensembl:ENSBTAT00000012216
Uniprot:E1BI11
Length = 1043
Score = 89 (36.4 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 51 WTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKKR 95
W ER++F ++K+F L+ ++ +T + CVE+YY KK+
Sbjct: 832 WKMAERKLFNKGIAIYKKDFFLVQKLIQTKTVAQCVEFYYTYKKQ 876
Score = 42 (19.8 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 17/47 (36%), Positives = 21/47 (44%)
Query: 5 RRHSLSVIPPI--ICDPRHPFT-GPRFINNNGRVTDYEAEMRDRAQA 48
R +S V PP+ + P + PR IN R MRDRA A
Sbjct: 696 RSNSAEVTPPVLSVMGEATPVSIEPR-INVGSRFQAEIPSMRDRALA 741
>UNIPROTKB|Q9H0D2 [details] [associations]
symbol:ZNF541 "Zinc finger protein 541" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR007087 InterPro:IPR009057 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00717 GO:GO:0007275 GO:GO:0005634 GO:GO:0030154
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0007283 GO:GO:0006351 GO:GO:0003682 SUPFAM:SSF46689
eggNOG:COG5048 Gene3D:3.30.160.60 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
EMBL:AC010331 EMBL:AC016589 EMBL:AC073548 EMBL:AL136846
EMBL:AL833862 EMBL:BC101050 EMBL:BC101051 EMBL:BC101052
EMBL:BC101053 IPI:IPI00031040 IPI:IPI00168550 IPI:IPI00789566
RefSeq:NP_001094889.1 UniGene:Hs.14161 ProteinModelPortal:Q9H0D2
SMR:Q9H0D2 IntAct:Q9H0D2 PhosphoSite:Q9H0D2 DMDM:221222508
PaxDb:Q9H0D2 PRIDE:Q9H0D2 Ensembl:ENST00000314121
Ensembl:ENST00000391901 Ensembl:ENST00000448976 GeneID:84215
KEGG:hsa:84215 UCSC:uc002phg.4 UCSC:uc010elh.3 UCSC:uc010eli.3
CTD:84215 GeneCards:GC19M048023 HGNC:HGNC:25294 neXtProt:NX_Q9H0D2
PharmGKB:PA134941115 HOGENOM:HOG000155802 HOVERGEN:HBG108770
InParanoid:Q9H0D2 OMA:RNLPGCP GenomeRNAi:84215 NextBio:73626
Bgee:Q9H0D2 CleanEx:HS_ZNF541 Genevestigator:Q9H0D2
GermOnline:ENSG00000118156 Uniprot:Q9H0D2
Length = 1365
Score = 108 (43.1 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 50 MWTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKK 94
+WT E+ +F+ + H+K+F LI ++ +T + CVEYYY+ KK
Sbjct: 1183 VWTPIEKRLFKKAFYAHKKDFYLIHKMIQTKTVAQCVEYYYIWKK 1227
>UNIPROTKB|F1RLY4 [details] [associations]
symbol:ZNF541 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR007087 InterPro:IPR009057
InterPro:IPR013087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 SMART:SM00717 GO:GO:0005634
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 SUPFAM:SSF46689
Gene3D:3.30.160.60 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GeneTree:ENSGT00530000063277 EMBL:FP104555
Ensembl:ENSSSCT00000003459 Uniprot:F1RLY4
Length = 1365
Score = 108 (43.1 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 51 WTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKK 94
WT E+ +F+ + H+K+F LI ++ +T + CVEYYY+ KK
Sbjct: 1177 WTPMEKRLFKKAFCAHKKDFYLIHKTIQTKTVAQCVEYYYIWKK 1220
>UNIPROTKB|F1RLY3 [details] [associations]
symbol:ZNF541 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR007087 InterPro:IPR009057
InterPro:IPR013087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 SMART:SM00717 GO:GO:0005634
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 SUPFAM:SSF46689
Gene3D:3.30.160.60 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GeneTree:ENSGT00530000063277 OMA:RNLPGCP EMBL:FP104555
Ensembl:ENSSSCT00000003460 Uniprot:F1RLY3
Length = 1372
Score = 108 (43.1 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 51 WTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKK 94
WT E+ +F+ + H+K+F LI ++ +T + CVEYYY+ KK
Sbjct: 1184 WTPMEKRLFKKAFCAHKKDFYLIHKTIQTKTVAQCVEYYYIWKK 1227
>UNIPROTKB|F1NVK5 [details] [associations]
symbol:F1NVK5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448
PROSITE:PS51156 GeneTree:ENSGT00510000046482 OMA:SQQTRLG
EMBL:AADN02066697 IPI:IPI00811763 Ensembl:ENSGALT00000001662
Uniprot:F1NVK5
Length = 571
Score = 103 (41.3 bits), Expect = 0.00012, P = 0.00012
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 42 MRDRAQAKMWTQQEREVFRDKYIHHQKNFGLI-ASFLERRTPSDCVEYYYLSKKRENY 98
+RD A W+++E F + H KNF LI A+ + R+ +CVEYYY+ KK E Y
Sbjct: 303 IRDELCA--WSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYMWKKSERY 358
>MGI|MGI:3647699 [details] [associations]
symbol:Zfp541 "zinc finger protein 541" species:10090 "Mus
musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355 SMART:SM00717
MGI:MGI:3647699 GO:GO:0007275 GO:GO:0005634 GO:GO:0030154
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0007283 GO:GO:0006351 GO:GO:0003682 SUPFAM:SSF46689
Gene3D:3.30.160.60 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GeneTree:ENSGT00530000063277 HOGENOM:HOG000155802
HOVERGEN:HBG108770 OMA:RNLPGCP EMBL:DQ864732 EMBL:BC157962
IPI:IPI00758325 IPI:IPI00919190 RefSeq:NP_001092747.1
UniGene:Mm.290718 ProteinModelPortal:Q0GGX2 SMR:Q0GGX2
STRING:Q0GGX2 PhosphoSite:Q0GGX2 PaxDb:Q0GGX2 PRIDE:Q0GGX2
Ensembl:ENSMUST00000108509 GeneID:666528 KEGG:mmu:666528
UCSC:uc009fgv.1 UCSC:uc012fab.1 CTD:666528 eggNOG:NOG293794
InParanoid:Q0GGX2 OrthoDB:EOG418BMH NextBio:430179 Bgee:Q0GGX2
Genevestigator:Q0GGX2 Uniprot:Q0GGX2
Length = 1363
Score = 107 (42.7 bits), Expect = 0.00012, P = 0.00012
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 50 MWTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKK 94
+WT E+ +F+ + H+K+F LI ++ ++ + CVEYYY+ KK
Sbjct: 1174 IWTPMEKRLFKKAFCAHKKDFYLIHKMIQTKSVAQCVEYYYIWKK 1218
>UNIPROTKB|F6RU81 [details] [associations]
symbol:ELMSAN1 "ELM2 and SANT domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
EMBL:AC006146 HGNC:HGNC:19853 ChiTaRS:C14orf43 EMBL:AC005520
IPI:IPI00878852 ProteinModelPortal:F6RU81 SMR:F6RU81 PRIDE:F6RU81
Ensembl:ENST00000435371 ArrayExpress:F6RU81 Bgee:F6RU81
Uniprot:F6RU81
Length = 1019
Score = 89 (36.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 51 WTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKKR 95
W ER++F ++K+F L+ ++ +T + CVE+YY KK+
Sbjct: 833 WKMAERKLFNKGIAIYKKDFFLVQKLIQTKTVAQCVEFYYTYKKQ 877
Score = 40 (19.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 5 RRHSLSVIPPI--ICDPRHPFT-GPRFINNNGRVTDYEAE---MRDRAQA 48
R +S V PP+ + P + PR IN R ++AE MRDRA A
Sbjct: 697 RTNSAEVTPPVLSVMGEATPVSIEPR-INVGSR---FQAEIPLMRDRALA 742
>UNIPROTKB|Q6PJG2 [details] [associations]
symbol:ELMSAN1 "ELM2 and SANT domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0003682 SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156 EMBL:AC006146
EMBL:BC006511 EMBL:BC009202 EMBL:BC015668 EMBL:AK127785
IPI:IPI00784739 RefSeq:NP_001036783.1 RefSeq:NP_919254.2
UniGene:Hs.594157 ProteinModelPortal:Q6PJG2 SMR:Q6PJG2
IntAct:Q6PJG2 STRING:Q6PJG2 PhosphoSite:Q6PJG2 DMDM:118572229
PRIDE:Q6PJG2 Ensembl:ENST00000286523 Ensembl:ENST00000394071
Ensembl:ENST00000423556 GeneID:91748 KEGG:hsa:91748 UCSC:uc001xot.3
CTD:91748 GeneCards:GC14M074181 H-InvDB:HIX0011798 HGNC:HGNC:19853
HPA:HPA003111 neXtProt:NX_Q6PJG2 PharmGKB:PA134877876
eggNOG:NOG287797 HOGENOM:HOG000111818 HOVERGEN:HBG081263
InParanoid:Q6PJG2 OMA:PDMNPEL OrthoDB:EOG451DQ2 PhylomeDB:Q6PJG2
ChiTaRS:C14orf43 GenomeRNAi:91748 NextBio:77425 ArrayExpress:Q6PJG2
Bgee:Q6PJG2 CleanEx:HS_C14orf43 Genevestigator:Q6PJG2
GermOnline:ENSG00000156030 Uniprot:Q6PJG2
Length = 1045
Score = 89 (36.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 51 WTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKKR 95
W ER++F ++K+F L+ ++ +T + CVE+YY KK+
Sbjct: 833 WKMAERKLFNKGIAIYKKDFFLVQKLIQTKTVAQCVEFYYTYKKQ 877
Score = 40 (19.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 5 RRHSLSVIPPI--ICDPRHPFT-GPRFINNNGRVTDYEAE---MRDRAQA 48
R +S V PP+ + P + PR IN R ++AE MRDRA A
Sbjct: 697 RTNSAEVTPPVLSVMGEATPVSIEPR-INVGSR---FQAEIPLMRDRALA 742
>UNIPROTKB|E2RQ12 [details] [associations]
symbol:C14orf43 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR007087 InterPro:IPR009057
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
GO:GO:0003682 SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156 OMA:PDMNPEL
GeneTree:ENSGT00530000063277 EMBL:AAEX03005839 EMBL:AAEX03005840
Ensembl:ENSCAFT00000026701 Uniprot:E2RQ12
Length = 1105
Score = 89 (36.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 51 WTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKKR 95
W ER++F ++K+F L+ ++ +T + CVE+YY KK+
Sbjct: 834 WKMAERKLFNKGIAIYKKDFFLVQKLIQTKTVAQCVEFYYTYKKQ 878
Score = 40 (19.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 5 RRHSLSVIPPI--ICDPRHPFT-GPRFINNNGRVTDYEAE---MRDRAQA 48
R +S V PP+ + P + PR IN R ++AE MRDRA A
Sbjct: 698 RSNSAEVTPPVLSVMGEATPVSIEPR-INVGSR---FQAEIPLMRDRALA 743
>WB|WBGene00005006 [details] [associations]
symbol:spr-1 species:6239 "Caenorhabditis elegans"
[GO:0003682 "chromatin binding" evidence=IEA] InterPro:IPR000679
InterPro:IPR001005 InterPro:IPR009057 PROSITE:PS00344
PROSITE:PS50114 SMART:SM00717 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GeneTree:ENSGT00550000074554 eggNOG:NOG326181 EMBL:AF548624
EMBL:AY160228 EMBL:FO080993 PIR:T29613 PIR:T29614
RefSeq:NP_505098.1 UniGene:Cel.18389 ProteinModelPortal:Q18919
SMR:Q18919 DIP:DIP-26333N IntAct:Q18919 MINT:MINT-1054625
STRING:Q18919 PaxDb:Q18919 EnsemblMetazoa:D1014.8 GeneID:179192
KEGG:cel:CELE_D1014.8 UCSC:D1014.8 CTD:179192 WormBase:D1014.8
InParanoid:Q18919 OMA:NCGEKAE NextBio:904314 Uniprot:Q18919
Length = 558
Score = 101 (40.6 bits), Expect = 0.00018, P = 0.00018
Identities = 27/69 (39%), Positives = 35/69 (50%)
Query: 31 NNGRVTDYEAEMRDRAQAK-MWTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYY 89
NN AE+ R + K +WT QE +F + Y KNF I S L R+ V++Y
Sbjct: 177 NNFNFDSAIAEVARRNELKDVWTDQEITLFENCYQIFGKNFSQIRSALCHRSLQSIVQFY 236
Query: 90 YLSKKRENY 98
Y SKKR Y
Sbjct: 237 YESKKRVKY 245
>RGD|1310756 [details] [associations]
symbol:Zfp541 "zinc finger protein 541" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR007087 InterPro:IPR009057
InterPro:IPR013087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 SMART:SM00717 RGD:1310756
GO:GO:0005634 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
SUPFAM:SSF46689 Gene3D:3.30.160.60 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GeneTree:ENSGT00530000063277 CTD:666528 OrthoDB:EOG418BMH
IPI:IPI00778769 RefSeq:XP_003748823.1 RefSeq:XP_003753266.1
PRIDE:D3Z8I0 Ensembl:ENSRNOT00000058241 GeneID:308108
KEGG:rno:308108 UCSC:RGD:1310756 Uniprot:D3Z8I0
Length = 1301
Score = 105 (42.0 bits), Expect = 0.00019, P = 0.00019
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 50 MWTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKK 94
+WT E+ +F+ + H+K+F LI ++ ++ + CVEYYY+ KK
Sbjct: 1112 IWTPMEKRLFKKAFCAHKKDFYLIHKTIQTKSVAQCVEYYYIWKK 1156
>UNIPROTKB|E1C1W0 [details] [associations]
symbol:TRERF1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001005 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 SMART:SM00717 GO:GO:0005634
GO:GO:0045893 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0003682 SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GeneTree:ENSGT00530000063277 OMA:LYYDYQQ EMBL:AADN02012058
IPI:IPI00591573 Ensembl:ENSGALT00000016090 Uniprot:E1C1W0
Length = 1165
Score = 101 (40.6 bits), Expect = 0.00045, P = 0.00045
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 46 AQAKMWTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKK 94
A + WT QER +F++ + K+F + ++ +T + CVEYYY KK
Sbjct: 858 AGSDKWTHQERRLFKEALSTYSKDFIFVQKMVKSKTVAQCVEYYYTWKK 906
>DICTYBASE|DDB_G0293468 [details] [associations]
symbol:mybS "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717
dictyBase:DDB_G0293468 GO:GO:0005634 GenomeReviews:CM000155_GR
GO:GO:0003677 GO:GO:0003682 EMBL:AAFI02000211 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 RefSeq:XP_001134490.1
EnsemblProtists:DDB0233337 GeneID:8629239 KEGG:ddi:DDB_G0293468
eggNOG:NOG243929 InParanoid:Q1ZXA2 Uniprot:Q1ZXA2
Length = 1212
Score = 86 (35.3 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 14/63 (22%), Positives = 38/63 (60%)
Query: 51 WTQQEREVFRDKYIHHQKNFGLIASFLERRTPSDCVEYYYLSKKRENYKRAIPTNNMLMK 110
W+Q ++++F + + ++K+F I++ ++ ++ D +EY++ K+ + YK +M+
Sbjct: 1027 WSQLQKDLFDEGFKIYKKDFKKISTLIKGKSCQDVIEYFFWYKQTKKYKSLYSYKYQIMQ 1086
Query: 111 ETL 113
+ L
Sbjct: 1087 QQL 1089
Score = 38 (18.4 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 25 GPRFINN-NGRVTDYEAEMRDRAQAKMWTQQERE 57
G IN+ N T+Y ++ ++ Q + QQ+++
Sbjct: 663 GVVLINDDNTNSTEYNLKLGEQQQQQQQQQQQQQ 696
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 114 114 0.00091 102 3 11 22 0.44 30
29 0.44 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 69
No. of states in DFA: 583 (62 KB)
Total size of DFA: 137 KB (2085 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.49u 0.08s 13.57t Elapsed: 00:00:11
Total cpu time: 13.50u 0.08s 13.58t Elapsed: 00:00:11
Start: Thu Aug 15 10:56:12 2013 End: Thu Aug 15 10:56:23 2013