BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6390
(197 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 207 bits (527), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ SFC +KP++ +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 112 LLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 207 bits (526), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 119 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 178
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 179 PEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 238
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 239 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 298
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 207 bits (526), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 172 PEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 206 bits (524), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 172
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 233 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 206 bits (524), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 206 bits (524), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 206 bits (524), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 206 bits (524), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 119 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 178
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 179 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 238
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 239 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 298
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 206 bits (524), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 206 bits (524), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 116 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 175
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 235
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 236 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 295
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 206 bits (524), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 206 bits (524), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 206 bits (523), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 204 bits (519), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 116 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 175
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 235
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 236 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 295
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 204 bits (519), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 204 bits (519), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 204 bits (519), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 204 bits (519), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 170
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 204 bits (519), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 204 bits (519), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 204 bits (519), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 204 bits (519), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 233 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 204 bits (519), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 204 bits (519), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 233 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 204 bits (519), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 233 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 204 bits (519), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 204 bits (519), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 204 bits (519), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 204 bits (519), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 170
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 204 bits (519), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 204 bits (518), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 204 bits (518), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 233 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 204 bits (518), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 204 bits (518), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D T
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 203 bits (517), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 122/178 (68%), Gaps = 15/178 (8%)
Query: 24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
PE+LLG + YS VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E WPGV
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
+ +PDYK +FP+W+ K V LD+DG LL + L Y P RI+A+ AL H +F D
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 185 bits (470), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 106/150 (70%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFGLARAFG+PVR YTHEVVTLWYRAP+VL+GS++YS +D+WS+GCIFAE+
Sbjct: 139 LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGA 198
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
PLF G SE DQL RIFR+L TP NWP V++LP Y F + + +K LD+ G+
Sbjct: 199 PLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGI 258
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKT 188
DLL K L P RI A+ AL+H YF +
Sbjct: 259 DLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 185 bits (470), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 106/150 (70%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFGLARAFG+PVR YTHEVVTLWYRAP+VL+GS++YS +D+WS+GCIFAE+
Sbjct: 139 LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
PLF G SE DQL RIFR+L TP NWP V++LP Y F + + +K LD+ G+
Sbjct: 199 PLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGI 258
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKT 188
DLL K L P RI A+ AL+H YF +
Sbjct: 259 DLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 185 bits (469), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 106/150 (70%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFGLARAFG+PVR YTHE+VTLWYRAP+VL+GS++YS +D+WS+GCIFAE+
Sbjct: 139 LKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
PLF G SE DQL RIFR+L TP NWP V++LP Y F + + +K LD+ G+
Sbjct: 199 PLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGI 258
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKT 188
DLL K L P RI A+ AL+H YF +
Sbjct: 259 DLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 167 bits (423), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 78/149 (52%), Positives = 107/149 (71%), Gaps = 1/149 (0%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
++K+ DFGLARAFG+P+R +THE++TLWYR PE+LLGS+ YS VD+WSI CI+AE+ +
Sbjct: 175 VLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMK 234
Query: 98 KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
PLF GDSEIDQLF+IF VL P + WPGV+ LPD+K +FP++ L + + L D
Sbjct: 235 TPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDE 294
Query: 158 LDLLEKTLIYC-PATRINAENALKHKYFA 185
L ++ P RI+A+NAL+H YF+
Sbjct: 295 GLDLLTAMLEMDPVKRISAKNALEHPYFS 323
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 167 bits (422), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/187 (47%), Positives = 118/187 (63%), Gaps = 16/187 (8%)
Query: 16 QVKITTRLFLQATSFC---------IKPKSNIV------KVADFGLARAFGVPVRIYTHE 60
Q+KI L+ + C +KP++ ++ K+ADFGLARAFG+PVR YTHE
Sbjct: 120 QIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE 179
Query: 61 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTP 120
VVTLWYRAP+VL+GS++YS VD+WSIGCIFAE+ T KPLF G ++ DQL +IF +L TP
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP 239
Query: 121 TEDNWPGVSKLPDYKT-TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENAL 179
WP V +LP +K TF + + Q+G+DLL L + P RI+A +A+
Sbjct: 240 NPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAM 299
Query: 180 KHKYFAD 186
H YF D
Sbjct: 300 NHPYFKD 306
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 167 bits (422), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/187 (47%), Positives = 118/187 (63%), Gaps = 16/187 (8%)
Query: 16 QVKITTRLFLQATSFC---------IKPKSNIV------KVADFGLARAFGVPVRIYTHE 60
Q+KI L+ + C +KP++ ++ K+ADFGLARAFG+PVR YTHE
Sbjct: 120 QIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE 179
Query: 61 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTP 120
VVTLWYRAP+VL+GS++YS VD+WSIGCIFAE+ T KPLF G ++ DQL +IF +L TP
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP 239
Query: 121 TEDNWPGVSKLPDYKT-TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENAL 179
WP V +LP +K TF + + Q+G+DLL L + P RI+A +A+
Sbjct: 240 NPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAM 299
Query: 180 KHKYFAD 186
H YF D
Sbjct: 300 NHPYFKD 306
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 162 bits (411), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 109/154 (70%), Gaps = 3/154 (1%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
++ +K+ADFGLARAFG+PVR Y+ EVVTLWYR P+VL G++ YS +D+WS GCIFAE+
Sbjct: 136 RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
Query: 95 AT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW-SNFCLDKHVKN 152
A +PLF G+ DQL RIFR+L TPTE+ WP ++KLPDYK +P + + L V
Sbjct: 196 ANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK-PYPMYPATTSLVNVVPK 254
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
L+ G DLL+ L P RI+AE AL+H YF+D
Sbjct: 255 LNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 161 bits (407), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/154 (53%), Positives = 109/154 (70%), Gaps = 3/154 (1%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
++ +K+A+FGLARAFG+PVR Y+ EVVTLWYR P+VL G++ YS +D+WS GCIFAE+
Sbjct: 136 RNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
Query: 95 ATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW-SNFCLDKHVKN 152
A +PLF G+ DQL RIFR+L TPTE+ WP ++KLPDYK +P + + L V
Sbjct: 196 ANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK-PYPMYPATTSLVNVVPK 254
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
L+ G DLL+ L P RI+AE AL+H YF+D
Sbjct: 255 LNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 159 bits (401), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 117/189 (61%), Gaps = 16/189 (8%)
Query: 12 VGTYQVKITTRLFLQATSFC---------IKPKSNIV------KVADFGLARAFGVPVRI 56
+ + VK+ L+ ++C +KP++ ++ K+ADFGLARA +P +
Sbjct: 97 INMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 156
Query: 57 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRV 116
Y +EVVTLWYR P++LLGS YS +D+W +GCIF E+AT +PLF G + +QL IFR+
Sbjct: 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRI 216
Query: 117 LTTPTEDNWPGVSKLPDYKT-TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINA 175
L TPTE+ WPG+ ++KT +P++ L H LD DG DLL K L + RI+A
Sbjct: 217 LGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISA 276
Query: 176 ENALKHKYF 184
E+A+KH +F
Sbjct: 277 EDAMKHPFF 285
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 155 bits (393), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 99/153 (64%), Gaps = 1/153 (0%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
++ ++K+ADFGLA++FG P R Y H+VVT WYRAPE+L G++ Y VD+W++GCI AE+
Sbjct: 147 ENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL 206
Query: 95 ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
R P GDS++DQL RIF L TPTE+ WP + LPDY TF + L
Sbjct: 207 LLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDY-VTFKSFPGIPLHHIFSAAG 265
Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYFADK 187
D LDL++ ++ P RI A ALK KYF+++
Sbjct: 266 DDLLDLIQGLFLFNPCARITATQALKMKYFSNR 298
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 108/183 (59%), Gaps = 20/183 (10%)
Query: 24 FLQATSFC---------IKPKSNIV------KVADFGLARAFGVPVRIYTHEVVTLWYRA 68
LQ +FC +KP++ ++ K+ DFGLARAFG+PV ++ EVVTLWYRA
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRA 176
Query: 69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
P+VL+GS+ YS +D+WS GCI AE+ T KPLF G ++ +QL IF ++ TP E WP V
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV 236
Query: 129 SKLPDYKTTF----PEWSNFCLDKHVKN-LDQDGLDLLEKTLIYCPATRINAENALKHKY 183
+KLP Y P L H K LD + +D L L P R++A+ AL H +
Sbjct: 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296
Query: 184 FAD 186
FA+
Sbjct: 297 FAE 299
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 101/151 (66%), Gaps = 4/151 (2%)
Query: 36 SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
S +K+ADFGLAR + + + T VVTLWYRAPEVLL S Y+ PVD+WS+GCIFAE+
Sbjct: 156 SGQIKLADFGLARIYSFQMAL-TSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMF 213
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
RKPLF+G S++DQL +I V+ P E++WP LP + F S ++K V ++D+
Sbjct: 214 RRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP--RQAFHSKSAQPIEKFVTDIDE 271
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFAD 186
G DLL K L + PA RI+A +AL H YF D
Sbjct: 272 LGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 141 bits (355), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 101/151 (66%), Gaps = 4/151 (2%)
Query: 36 SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
S +K+ADFGLAR + + + T VVTLWYRAPEVLL S Y+ PVD+WS+GCIFAE+
Sbjct: 156 SGQIKLADFGLARIYSFQMAL-TSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMF 213
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
RKPLF+G S++DQL +I V+ P E++WP LP + F S ++K V ++D+
Sbjct: 214 RRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP--RQAFHSKSAQPIEKFVTDIDE 271
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFAD 186
G DLL K L + PA RI+A +AL H YF D
Sbjct: 272 LGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 139 bits (351), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 100/149 (67%), Gaps = 4/149 (2%)
Query: 36 SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
S +K+ADFGLAR + + + T VVTLWYRAPEVLL S Y+ PVD+WS+GCIFAE+
Sbjct: 156 SGQIKLADFGLARIYSFQMAL-TSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMF 213
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
RKPLF+G S++DQL +I V+ P E++WP LP + F S ++K V ++D+
Sbjct: 214 RRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP--RQAFHSKSAQPIEKFVTDIDE 271
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYF 184
G DLL K L + PA RI+A +AL H YF
Sbjct: 272 LGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 130 bits (327), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 106/183 (57%), Gaps = 19/183 (10%)
Query: 17 VKITTRLFLQATSF----CI-----KPKS------NIVKVADFGLARAFGVPVRIYTHEV 61
+K R FL+ F CI KP++ VK+ADFGLAR + + ++ V
Sbjct: 114 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP-VV 172
Query: 62 VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPT 121
VTLWYRAPEVLL S Y+ PVD+WS+GCIFAE+ RKPLF G+SE DQL +IF ++ P
Sbjct: 173 VTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 231
Query: 122 EDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
ED+WP LP + FP + V +++ G LL + L + P RI+A AL+H
Sbjct: 232 EDDWPRDVSLP--RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 289
Query: 182 KYF 184
Y
Sbjct: 290 SYL 292
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 130 bits (327), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 106/183 (57%), Gaps = 19/183 (10%)
Query: 17 VKITTRLFLQATSF----CI-----KPKS------NIVKVADFGLARAFGVPVRIYTHEV 61
+K R FL+ F CI KP++ VK+ADFGLAR + + + T V
Sbjct: 122 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL-TPVV 180
Query: 62 VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPT 121
VTLWYRAPEVLL S Y+ PVD+WS+GCIFAE+ RKPLF G+SE DQL +IF ++ P
Sbjct: 181 VTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 239
Query: 122 EDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
ED+WP LP + FP + V +++ G LL + L + P RI+A AL+H
Sbjct: 240 EDDWPRDVSLP--RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297
Query: 182 KYF 184
Y
Sbjct: 298 SYL 300
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 129 bits (323), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 105/183 (57%), Gaps = 19/183 (10%)
Query: 17 VKITTRLFLQATSF----CI-----KPKS------NIVKVADFGLARAFGVPVRIYTHEV 61
+K R FL+ F CI KP++ VK+ADFGLAR + + + V
Sbjct: 114 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL-APVV 172
Query: 62 VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPT 121
VTLWYRAPEVLL S Y+ PVD+WS+GCIFAE+ RKPLF G+SE DQL +IF ++ P
Sbjct: 173 VTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 231
Query: 122 EDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
ED+WP LP + FP + V +++ G LL + L + P RI+A AL+H
Sbjct: 232 EDDWPRDVSLP--RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 289
Query: 182 KYF 184
Y
Sbjct: 290 SYL 292
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 107/189 (56%), Gaps = 31/189 (16%)
Query: 17 VKITTRLFLQATSF----CI-----KPKS------NIVKVADFGLARAFGVPVRIYTHE- 60
+K R FL+ F CI KP++ VK+ADFGLAR IY+++
Sbjct: 114 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR-------IYSYQM 166
Query: 61 -----VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFR 115
VVTLWYRAPEVLL S Y+ PVD+WS+GCIFAE+ RKPLF G+SE DQL +IF
Sbjct: 167 ALDPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD 225
Query: 116 VLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINA 175
++ P ED+WP LP + FP + V +++ G LL + L + P RI+A
Sbjct: 226 LIGLPPEDDWPRDVSLP--RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISA 283
Query: 176 ENALKHKYF 184
AL+H Y
Sbjct: 284 FRALQHSYL 292
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 9/158 (5%)
Query: 35 KSNIVKVADFGLARAFGV-----PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
+ ++K+ADFGLARAF + P R Y + VVTLWYR PE+LLG + Y P+D+W GC
Sbjct: 160 RDGVLKLADFGLARAFSLAKNSQPNR-YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGC 218
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY-KTTFPEWSNFCLDK 148
I AE+ TR P+ QG++E QL I ++ + T + WP V Y K + +
Sbjct: 219 IMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKD 278
Query: 149 HVKNLDQD--GLDLLEKTLIYCPATRINAENALKHKYF 184
+K +D LDL++K L+ PA RI++++AL H +F
Sbjct: 279 RLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 9/158 (5%)
Query: 35 KSNIVKVADFGLARAFGV-----PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
+ ++K+ADFGLARAF + P R Y + VVTLWYR PE+LLG + Y P+D+W GC
Sbjct: 160 RDGVLKLADFGLARAFSLAKNSQPNR-YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGC 218
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY-KTTFPEWSNFCLDK 148
I AE+ TR P+ QG++E QL I ++ + T + WP V Y K + +
Sbjct: 219 IMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKD 278
Query: 149 HVKNLDQD--GLDLLEKTLIYCPATRINAENALKHKYF 184
+K +D LDL++K L+ PA RI++++AL H +F
Sbjct: 279 RLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 9/158 (5%)
Query: 35 KSNIVKVADFGLARAFGV-----PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
+ ++K+ADFGLARAF + P R Y + VVTLWYR PE+LLG + Y P+D+W GC
Sbjct: 159 RDGVLKLADFGLARAFSLAKNSQPNR-YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGC 217
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY-KTTFPEWSNFCLDK 148
I AE+ TR P+ QG++E QL I ++ + T + WP V Y K + +
Sbjct: 218 IMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKD 277
Query: 149 HVKNLDQD--GLDLLEKTLIYCPATRINAENALKHKYF 184
+K +D LDL++K L+ PA RI++++AL H +F
Sbjct: 278 RLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 9/158 (5%)
Query: 35 KSNIVKVADFGLARAFGV-----PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
+ ++K+ADFGLARAF + P R Y + VVTLWYR PE+LLG + Y P+D+W GC
Sbjct: 160 RDGVLKLADFGLARAFSLAKNSQPNR-YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGC 218
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY-KTTFPEWSNFCLDK 148
I AE+ TR P+ QG++E QL I ++ + T + WP V Y K + +
Sbjct: 219 IMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKD 278
Query: 149 HVKNLDQD--GLDLLEKTLIYCPATRINAENALKHKYF 184
+K +D LDL++K L+ PA RI++++AL H +F
Sbjct: 279 RLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 93/172 (54%), Gaps = 21/172 (12%)
Query: 34 PKSNIVKVADFGLARAFGVPVRIYTH---EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI 90
P+ VK+AD G AR F P++ VVT WYRAPE+LLG++ Y+ +D+W+IGCI
Sbjct: 166 PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCI 225
Query: 91 FAEIATRKPLFQGDSE---------IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE- 140
FAE+ T +P+F E DQL RIF V+ P + +W + K+P++ T +
Sbjct: 226 FAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDF 285
Query: 141 ----WSNFCL----DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
++N L +KH D LL+K L P RI +E A++ YF
Sbjct: 286 RRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 337
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 109 bits (273), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 97/175 (55%), Gaps = 9/175 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCP 81
L+ ++ + S++ K+ DFGLAR T V T WYRAPE++L S+ Y+
Sbjct: 152 LKPSNLLLNTTSDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 210
Query: 82 VDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP-GVS-KLPDYKTTFP 139
+D+WS+GCI AE+ + +P+F G +DQL I +L +P++++ G++ K +Y + P
Sbjct: 211 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYLLSLP 270
Query: 140 EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLP 191
+ ++ N D LDLL+K L + P RI E AL H Y A D +D P
Sbjct: 271 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSDEP 325
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39 VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ DFGLAR T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 165 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
+ +P+F G +DQL I +L +P++++ + L +Y + P + ++ N
Sbjct: 225 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 284
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLP 191
D LDLL+K L + P RI E AL H Y A D +D P
Sbjct: 285 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSDEP 325
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 90/170 (52%), Gaps = 16/170 (9%)
Query: 39 VKVADFGLARAFGVPV----------RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIG 88
+KV DFGLAR T V T WYRAPEV+L S +YS +DVWS G
Sbjct: 151 LKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCG 210
Query: 89 CIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP---DYKTTFPEWSNFC 145
CI AE+ R+P+F G QL IF ++ TP DN + P +Y + P +
Sbjct: 211 CILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAP 270
Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLPK 192
L+K ++ G+DLL++ L++ PA RI A+ AL+H Y + D D P+
Sbjct: 271 LEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPE 320
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 90/170 (52%), Gaps = 16/170 (9%)
Query: 39 VKVADFGLARAFGVPV----------RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIG 88
+KV DFGLAR T V T WYRAPEV+L S +YS +DVWS G
Sbjct: 151 LKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCG 210
Query: 89 CIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP---DYKTTFPEWSNFC 145
CI AE+ R+P+F G QL IF ++ TP DN + P +Y + P +
Sbjct: 211 CILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAP 270
Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLPK 192
L+K ++ G+DLL++ L++ PA RI A+ AL+H Y + D D P+
Sbjct: 271 LEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPE 320
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39 VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ DFGLAR T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 163 LKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
+ +P+F G +DQL I +L +P++++ + L +Y + P + ++ N
Sbjct: 223 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNA 282
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
D LDLL+K L + P RI E AL H Y + D +D P
Sbjct: 283 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 323
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 104/210 (49%), Gaps = 31/210 (14%)
Query: 12 VGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI 56
V + VK T LQA +FC +KP K +++K+ DFG AR P
Sbjct: 99 VPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158
Query: 57 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRV 116
Y EV T WYR+PE+L+G +Y PVDVW+IGC+FAE+ + PL+ G S++DQL+ I +
Sbjct: 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKT 218
Query: 117 LTT---------PTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIY 167
L T + GV K+PD + P L+ N+ L LL+ L
Sbjct: 219 LGDLIPRHQQVFSTNQYFSGV-KIPDPEDMEP------LELKFPNISYPALGLLKGCLHM 271
Query: 168 CPATRINAENALKHKYFADKTDLPKFAEYY 197
P R+ E L H YF + ++ A+ +
Sbjct: 272 DPTERLTCEQLLHHPYFENIREIEDLAKEH 301
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 97/186 (52%), Gaps = 39/186 (20%)
Query: 39 VKVADFGLARAF--------GVPVRI-------------YTHEVVTLWYRAPEVLLGSQR 77
VKVADFGL+R+F +P+ I T V T WYRAPE+LLGS +
Sbjct: 148 VKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTK 207
Query: 78 YSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS-------- 129
Y+ +D+WS+GCI EI KP+F G S ++QL RI V+ P+ ++ +
Sbjct: 208 YTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMI 267
Query: 130 ---------KLPDYKTTFPEWSNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENAL 179
+ + + F +W N L + K + +++ LDLL+K L + P RI+A +AL
Sbjct: 268 ESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDAL 327
Query: 180 KHKYFA 185
KH + +
Sbjct: 328 KHPFVS 333
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39 VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ DFGLAR T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
+ +P+F G +DQL I +L +P++++ + L +Y + P + ++ N
Sbjct: 223 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNA 282
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
D LDLL+K L + P RI E AL H Y + D +D P
Sbjct: 283 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 323
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 90/162 (55%), Gaps = 10/162 (6%)
Query: 39 VKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+K+ DFGLAR P +T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 167 LKICDFGLARV-ADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
Query: 95 ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKN 152
+ +P+F G +DQL I +L +P++++ + L +Y + P + ++ N
Sbjct: 226 LSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 285
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
D LDLL+K L + P RI E AL H Y + D +D P
Sbjct: 286 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 327
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 90/162 (55%), Gaps = 10/162 (6%)
Query: 39 VKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+K+ DFGLAR P +T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 168 LKICDFGLARV-ADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 226
Query: 95 ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKN 152
+ +P+F G +DQL I +L +P++++ + L +Y + P + ++ N
Sbjct: 227 LSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 286
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
D LDLL+K L + P RI E AL H Y + D +D P
Sbjct: 287 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 328
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39 VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ DFGLAR T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 161 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 220
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
+ +P+F G +DQL I +L +P++++ + L +Y + P + ++ N
Sbjct: 221 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 280
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
D LDLL+K L + P RI E AL H Y + D +D P
Sbjct: 281 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 321
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39 VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ DFGLAR T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 183 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 242
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
+ +P+F G +DQL I +L +P++++ + L +Y + P + ++ N
Sbjct: 243 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 302
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
D LDLL+K L + P RI E AL H Y + D +D P
Sbjct: 303 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 343
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39 VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ DFGLAR T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 171 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 230
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
+ +P+F G +DQL I +L +P++++ + L +Y + P + ++ N
Sbjct: 231 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 290
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
D LDLL+K L + P RI E AL H Y + D +D P
Sbjct: 291 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 331
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39 VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ DFGLAR T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
+ +P+F G +DQL I +L +P++++ + L +Y + P + ++ N
Sbjct: 223 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 282
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
D LDLL+K L + P RI E AL H Y + D +D P
Sbjct: 283 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 323
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39 VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ DFGLAR T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 168 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 227
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
+ +P+F G +DQL I +L +P++++ + L +Y + P + ++ N
Sbjct: 228 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 287
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
D LDLL+K L + P RI E AL H Y + D +D P
Sbjct: 288 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 328
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39 VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ DFGLAR T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 169 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 228
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
+ +P+F G +DQL I +L +P++++ + L +Y + P + ++ N
Sbjct: 229 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 288
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
D LDLL+K L + P RI E AL H Y + D +D P
Sbjct: 289 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 329
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39 VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ DFGLAR T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 160 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 219
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
+ +P+F G +DQL I +L +P++++ + L +Y + P + ++ N
Sbjct: 220 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 279
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
D LDLL+K L + P RI E AL H Y + D +D P
Sbjct: 280 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 320
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39 VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ DFGLAR T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
+ +P+F G +DQL I +L +P++++ + L +Y + P + ++ N
Sbjct: 227 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 286
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
D LDLL+K L + P RI E AL H Y + D +D P
Sbjct: 287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 327
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39 VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ DFGLAR T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
+ +P+F G +DQL I +L +P++++ + L +Y + P + ++ N
Sbjct: 227 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 286
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
D LDLL+K L + P RI E AL H Y + D +D P
Sbjct: 287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 327
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39 VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ DFGLAR T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
+ +P+F G +DQL I +L +P++++ + L +Y + P + ++ N
Sbjct: 227 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 286
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
D LDLL+K L + P RI E AL H Y + D +D P
Sbjct: 287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 327
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39 VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ DFGLAR T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
+ +P+F G +DQL I +L +P++++ + L +Y + P + ++ N
Sbjct: 223 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 282
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
D LDLL+K L + P RI E AL H Y + D +D P
Sbjct: 283 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 323
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39 VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ DFGLAR T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
+ +P+F G +DQL I +L +P++++ + L +Y + P + ++ N
Sbjct: 223 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 282
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
D LDLL+K L + P RI E AL H Y + D +D P
Sbjct: 283 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 323
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39 VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ DFGLAR T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 165 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
+ +P+F G +DQL I +L +P++++ + L +Y + P + ++ N
Sbjct: 225 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 284
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
D LDLL+K L + P RI E AL H Y + D +D P
Sbjct: 285 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 325
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39 VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ DFGLAR T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
+ +P+F G +DQL I +L +P++++ + L +Y + P + ++ N
Sbjct: 227 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 286
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
D LDLL+K L + P RI E AL H Y + D +D P
Sbjct: 287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 327
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39 VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ DFGLAR T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
+ +P+F G +DQL I +L +P++++ + L +Y + P + ++ N
Sbjct: 227 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 286
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
D LDLL+K L + P RI E AL H Y + D +D P
Sbjct: 287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 327
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39 VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ DFGLAR T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 183 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 242
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
+ +P+F G +DQL I +L +P++++ + L +Y + P + ++ N
Sbjct: 243 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 302
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
D LDLL+K L + P RI E AL H Y + D +D P
Sbjct: 303 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 343
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 107 bits (267), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 90/170 (52%), Gaps = 16/170 (9%)
Query: 39 VKVADFGLARAFGVPVRIYTHE----------VVTLWYRAPEVLLGSQRYSCPVDVWSIG 88
+KV DFGLAR + V T WYRAPEV+L S +YS +DVWS G
Sbjct: 151 LKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCG 210
Query: 89 CIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP---DYKTTFPEWSNFC 145
CI AE+ R+P+F G QL IF ++ TP DN + P +Y + P +
Sbjct: 211 CILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAP 270
Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLPK 192
L+K ++ G+DLL++ L++ PA RI A+ AL+H Y + D D P+
Sbjct: 271 LEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPE 320
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 107 bits (266), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 8/161 (4%)
Query: 39 VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ DFGLAR T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 161 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 220
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
+ +P+F G +DQL I +L +P +++ + L +Y + P + ++ N
Sbjct: 221 SNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 280
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
D LDLL+K L + P RI E AL H Y + D +D P
Sbjct: 281 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 321
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 106 bits (265), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 89/166 (53%), Gaps = 10/166 (6%)
Query: 39 VKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+K+ DFGLAR P +T V T WYRAPE++L S+ Y+ +D+WS+GCI AE+
Sbjct: 183 LKICDFGLAR-IADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
Query: 95 ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV--SKLPDYKTTFPEWSNFCLDKHVKN 152
+ +P+F G +DQL I +L +P++++ + K +Y + P + K
Sbjct: 242 LSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPK 301
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLPKFAE 195
D LDLL++ L + P RI E AL H Y + D TD P E
Sbjct: 302 SDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDEPVAEE 347
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 93/166 (56%), Gaps = 13/166 (7%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
++ + + K N +K+ DFG A+ +P + + +YRAPE++LG+ Y+ +D+
Sbjct: 167 IKPQNLLVNSKDNTLKLCDFGSAKKL-IPSEPSVAXICSRFYRAPELMLGATEYTPSIDL 225
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY-KTTFP---- 139
WSIGC+F E+ KPLF G++ IDQL RI +++ TPT++ + P Y + FP
Sbjct: 226 WSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQM--IRMNPHYTEVRFPTLKA 283
Query: 140 -EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+W L + +L +DLLE+ L Y P RIN A+ H +F
Sbjct: 284 KDWRKI-LPEGTPSL---AIDLLEQILRYEPDLRINPYEAMAHPFF 325
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 87/172 (50%), Gaps = 20/172 (11%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+S +VK+ DFG AR P +Y EV T WYRAPE+L+G +Y VDVW+IGC+ E+
Sbjct: 159 QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEM 218
Query: 95 ATRKPLFQGDSEIDQLFRIFRVLTT--PTEDN-------WPGVSKLPDYKTTFPEWSNFC 145
+PLF GDS+IDQL+ I L P + GV +LP+ K P
Sbjct: 219 FMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV-RLPEIKEREP------ 271
Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAEYY 197
L++ L + +DL +K L P R L H +F + FAE +
Sbjct: 272 LERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ----MDGFAERF 319
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 100 bits (248), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 93/181 (51%), Gaps = 16/181 (8%)
Query: 23 LFLQATSFC---IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL 72
L L + + C IKP + +V K+ DFG A+ P + + +YRAPE++
Sbjct: 145 LHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS-PSEPNVAYICSRYYRAPELI 203
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNW----PGV 128
G+Q Y+ VD+WS+GCIFAE+ +P+F+GD+ QL I RVL P+ + P
Sbjct: 204 FGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSH 263
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ + Y + WSN D +K+ ++ DLL L Y P R+ AL H YF +
Sbjct: 264 TDVDLYNSKGIPWSNVFSDHSLKDA-KEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322
Query: 189 D 189
D
Sbjct: 323 D 323
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 99.8 bits (247), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 82/163 (50%), Gaps = 8/163 (4%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + VVT WYRAPEV+L RY+ VD+WS+GCI AE+ T K
Sbjct: 167 LKILDFGLARQADSEM---XGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTED--NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF+G +DQL I +V TP + + +Y PE + N
Sbjct: 224 TLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPL 283
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLPKFAEY 196
++LLEK L+ R+ A AL H YF D D P+ +Y
Sbjct: 284 AVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQVQKY 326
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 9/164 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P S ++K+ DFG A+ G P + + +YRAPE++ G+ Y+ +
Sbjct: 167 IKPQNLLLDPPSGVLKLIDFGSAKILIAGEP---NVSXICSRYYRAPELIFGATNYTTNI 223
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY-KTTFPEW 141
D+WS GC+ AE+ +PLF G+S IDQL I +VL TP+ + ++ P+Y + FP+
Sbjct: 224 DIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN--PNYMEHKFPQI 281
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
K + D +DL+ + L Y P+ R+ A AL H +F
Sbjct: 282 RPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 97.1 bits (240), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L + Y+ VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 88/177 (49%), Gaps = 9/177 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
L+ ++ + S + ++ DFGLAR + Y V T WYRAPE++L Y+ VD+
Sbjct: 157 LKPSNVAVNEDSEL-RILDFGLARQADEEMTGY---VATRWYRAPEIMLNWMHYNQTVDI 212
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK--LPDYKTTFPEWS 142
WS+GCI AE+ K LF G IDQL RI V+ TP+ + +S Y + P
Sbjct: 213 WSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMP 272
Query: 143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLPKFAEY 196
L + + +DLL + L+ R++A AL H YF+ D D P+ Y
Sbjct: 273 QKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEAEPY 329
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 88/177 (49%), Gaps = 9/177 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
L+ ++ + S + ++ DFGLAR + Y V T WYRAPE++L Y+ VD+
Sbjct: 157 LKPSNVAVNEDSEL-RILDFGLARQADEEMTGY---VATRWYRAPEIMLNWMHYNQTVDI 212
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK--LPDYKTTFPEWS 142
WS+GCI AE+ K LF G IDQL RI V+ TP+ + +S Y + P
Sbjct: 213 WSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMP 272
Query: 143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLPKFAEY 196
L + + +DLL + L+ R++A AL H YF+ D D P+ Y
Sbjct: 273 QKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEAEPY 329
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 83/167 (49%), Gaps = 6/167 (3%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
L+ ++ + S + K+ DFGLAR + Y V T WYRAPE++L Y+ VD+
Sbjct: 157 LKPSNLAVNEDSEL-KILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDI 212
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWS 142
WS+GCI AE+ T + LF G IDQL I R++ TP + +S +Y + +
Sbjct: 213 WSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMP 272
Query: 143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+ +DLLEK L+ RI A AL H YFA D
Sbjct: 273 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 83/167 (49%), Gaps = 6/167 (3%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
L+ ++ + S + K+ DFGLAR + Y V T WYRAPE++L Y+ VD+
Sbjct: 153 LKPSNLAVNEDSEL-KILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDI 208
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWS 142
WS+GCI AE+ T + LF G IDQL I R++ TP + +S +Y + +
Sbjct: 209 WSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMP 268
Query: 143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+ +DLLEK L+ RI A AL H YFA D
Sbjct: 269 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 193 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP-----DYKTTFPEWSNFCLDKHVKNL 153
LF G I+QL +I R+ TP +S++P +Y + P+
Sbjct: 250 TLFPGTDHINQLQQIMRLTGTPPAS---VISRMPSHEARNYINSLPQMPKRNFADVFIGA 306
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLPKFAEY 196
+ +DLLEK L+ RI A AL H YF+ D D P+ Y
Sbjct: 307 NPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHDPDDEPESEPY 352
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 171 LKILDFGLARHTADEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 228 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 287
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 288 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 171 LKILDFGLARHTADEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 228 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 287
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 288 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 171 LKILDFGLARHTADEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 228 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 287
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 288 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 82/163 (50%), Gaps = 8/163 (4%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+++ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ K
Sbjct: 162 LRILDFGLARQADEEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK--LPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL RI V+ TP+ + +S Y + P L + +
Sbjct: 219 ALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPL 278
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLPKFAEY 196
+DLL + L+ R++A AL H YF+ D D P+ Y
Sbjct: 279 AIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEAEPY 321
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 170 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 227 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL 286
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 287 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 160 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 217 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL 276
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 277 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 184 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 241 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL 300
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 301 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 175 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 232 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 291
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 292 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 324
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 187 LKILDFGLARHTDDEMXGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 244 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 303
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 304 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 336
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 176 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 233 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 292
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 293 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 325
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 183 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 240 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL 299
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 300 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 332
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 174 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 231 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL 290
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 291 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 323
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 175 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 232 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 291
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 292 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 324
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 169 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 226 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 285
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 286 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 170 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 227 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 286
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 287 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 184 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 241 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 300
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 301 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 160 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 217 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL 276
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 277 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 187 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 244 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 303
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 304 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 336
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 170 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 227 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 286
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 287 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 90/210 (42%), Gaps = 54/210 (25%)
Query: 39 VKVADFGLARAFGVP----------------------VRIYTHEVVTLWYRAPEVLLGSQ 76
VKV DFGLAR + T VVT WYRAPE++L +
Sbjct: 168 VKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQE 227
Query: 77 RYSCPVDVWSIGCIFAEI-----------ATRKPLFQGD-----------------SEID 108
Y+ +D+WS GCIFAE+ R PLF G S D
Sbjct: 228 NYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRD 287
Query: 109 QLFRIFRVLTTPTEDNWPGVSK--LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLI 166
QL IF ++ TPTED+ ++K + Y FP L + ++ DG++LLE L
Sbjct: 288 QLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLK 347
Query: 167 YCPATRINAENALKHKYFAD--KTDLPKFA 194
+ P RI + AL H Y D K L F+
Sbjct: 348 FNPNKRITIDQALDHPYLKDVRKKKLENFS 377
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 169 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 226 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 285
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 286 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 176 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 233 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 292
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 293 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 325
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 176 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 233 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 292
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 293 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 325
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 166 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 223 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 282
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 283 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 169 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 226 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 285
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 286 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 166 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 223 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 282
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 283 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 169 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 226 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 285
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 286 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 163 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 220 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 279
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 280 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 312
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 171 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 228 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 287
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 288 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 183 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 240 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 299
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 300 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 332
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 161 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 218 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 277
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 278 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 310
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 160 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 217 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 276
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 277 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + T V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEM---TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 161 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 218 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 277
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 278 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 310
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 162 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 219 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 278
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 279 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 311
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 166 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 223 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 282
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 283 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 39 VKVADFGLARAF-GVPVR---IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+K+ DFG+AR P T V T WYRAPE++L Y+ +D+WS+GCIF E+
Sbjct: 197 LKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEM 256
Query: 95 ATRKPLFQGDSEIDQLFRIFRVLTTPTED--NWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
R+ LF G + + QL I VL TP+ G ++ Y + P +
Sbjct: 257 LARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPG 316
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
D+ L LL + L + P+ RI+A AL+H + A D
Sbjct: 317 ADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD 353
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 39 VKVADFGLARAF-GVPVR---IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+K+ DFG+AR P T V T WYRAPE++L Y+ +D+WS+GCIF E+
Sbjct: 198 LKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEM 257
Query: 95 ATRKPLFQGDSEIDQLFRIFRVLTTPTED--NWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
R+ LF G + + QL I VL TP+ G ++ Y + P +
Sbjct: 258 LARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPG 317
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
D+ L LL + L + P+ RI+A AL+H + A D
Sbjct: 318 ADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD 354
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 93.6 bits (231), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ D+GLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 164 LKILDYGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 93.6 bits (231), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + + V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMAGF---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 93.6 bits (231), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
L+ ++ + S + K+ DFGL R + Y V T WYRAPE++L Y+ VD+
Sbjct: 151 LKPSNLAVNEDSEL-KILDFGLCRHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDI 206
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWS 142
WS+GCI AE+ T + LF G IDQL I R++ TP + +S +Y + +
Sbjct: 207 WSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMP 266
Query: 143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+ +DLLEK L+ RI A AL H YFA D
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 93.6 bits (231), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + + V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 160 LKILDFGLARHTDDEMAGF---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 217 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL 276
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 277 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 93.2 bits (230), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + + V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMAGF---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 93.2 bits (230), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 10/168 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHE------VVTLWYRAPEVLLGSQRY 78
L+ + I + ++K+ DFGLAR Y+H+ +VT WYR+P +LL Y
Sbjct: 146 LKPANLFINTEDLVLKIGDFGLARIMDPH---YSHKGHLSEGLVTKWYRSPRLLLSPNNY 202
Query: 79 SCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVL-TTPTEDNWPGVSKLPDYKTT 137
+ +D+W+ GCIFAE+ T K LF G E++Q+ I + ED +S +P Y
Sbjct: 203 TKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRN 262
Query: 138 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA 185
+ L + + + ++ +D LE+ L + P R+ AE AL H Y +
Sbjct: 263 DMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMS 310
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 93.2 bits (230), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 184 LKILDFGLARHTDDEM---XGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 241 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL 300
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 301 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 94/221 (42%), Gaps = 57/221 (25%)
Query: 31 CIKPKSNIVKVADFGLARAFGVPVRIY-------------------------THEVVTLW 65
C+ + VK+ DFGLAR I+ T VVT W
Sbjct: 162 CLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRW 221
Query: 66 YRAPEVLLGSQRYSCPVDVWSIGCIFAEI-----------ATRKPLFQGD---------- 104
YRAPE++L + Y+ +D+WS GCIFAE+ R PLF G
Sbjct: 222 YRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFPLSPDHN 281
Query: 105 -------SEIDQLFRIFRVLTTPTEDNWPGVSK--LPDYKTTFPEWSNFCLDKHVKNLDQ 155
S DQL IF V+ TP E++ ++K + Y FP L K ++ +
Sbjct: 282 SKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPTRDGIDLSKKYSSISK 341
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFAD--KTDLPKFA 194
+G+DLLE L + RI + AL H Y D K +L F+
Sbjct: 342 EGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKENLENFS 382
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ FGLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 164 LKILGFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ D GLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 164 LKILDAGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ D GLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 164 LKILDRGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ D GLAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 164 LKILDGGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DF LAR + Y V T WYRAPE++L Y+ VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFYLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
LF G IDQL I R++ TP + +S +Y + + +
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
+DLLEK L+ RI A AL H YFA D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 89/175 (50%), Gaps = 27/175 (15%)
Query: 32 IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
+KP SNIV K+ DFGLAR G + T VVT +YRAPEV+LG Y VD+
Sbjct: 152 LKP-SNIVVKSDXTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 208
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT----------PTEDNWPGVSKLPDY 134
WS+GCI E+ K LF G IDQ ++ L T PT N+ V P Y
Sbjct: 209 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKY 266
Query: 135 KT-TFPEW---SNFCLD-KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
TFP+ S F D +H K DLL K L+ PA RI+ ++AL+H Y
Sbjct: 267 AGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1 FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
C +IQ+E + YQ+ + A +KP SNIV K+ DFGLA
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDXTLKILDFGLA 173
Query: 48 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
R G + T VVT +YRAPEV+LG Y VD+WS+GCI E+ K LF G I
Sbjct: 174 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 231
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
DQ ++ L T PT N+ V P Y TFP+ S F D +H K
Sbjct: 232 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 289
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
DLL K L+ PA RI+ ++AL+H Y
Sbjct: 290 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y VVT WYRAPEV+L Y+ VD+WS+GCI AE+ T K
Sbjct: 165 LKILDFGLARHADAEMTGY---VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD-----YKTTFPEWSNFCLDKHVKNL 153
LF+G +DQL +I +V P + V KL D Y + P+ +
Sbjct: 222 TLFKGKDYLDQLTQILKVTGVPGTEF---VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRA 278
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYF 184
DLLEK L R+ A AL H +F
Sbjct: 279 SPQAADLLEKMLELDVDKRLTAAQALTHPFF 309
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 90.1 bits (222), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLAR + Y VVT WYRAPEV+L Y+ VD+WS+GCI AE+ T K
Sbjct: 183 LKILDFGLARHADAEMTGY---VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD-----YKTTFPEWSNFCLDKHVKNL 153
LF+G +DQL +I +V P + V KL D Y + P+ +
Sbjct: 240 TLFKGKDYLDQLTQILKVTGVPGTEF---VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRA 296
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYF 184
DLLEK L R+ A AL H +F
Sbjct: 297 SPQAADLLEKMLELDVDKRLTAAQALTHPFF 327
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 90.1 bits (222), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1 FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
C +IQ+E + YQ+ + A +KP SNIV K+ DFGLA
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 173
Query: 48 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
R G + T VVT +YRAPEV+LG Y VD+WS+GCI E+ K LF G I
Sbjct: 174 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 231
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
DQ ++ L T PT N+ V P Y TFP+ S F D +H K
Sbjct: 232 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 289
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
DLL K L+ PA RI+ ++AL+H Y
Sbjct: 290 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 90.1 bits (222), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1 FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
C +IQ+E + YQ+ + A +KP SNIV K+ DFGLA
Sbjct: 153 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 211
Query: 48 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
R G + T VVT +YRAPEV+LG Y VD+WS+GCI E+ K LF G I
Sbjct: 212 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 269
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
DQ ++ L T PT N+ V P Y TFP+ S F D +H K
Sbjct: 270 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 327
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
DLL K L+ PA RI+ ++AL+H Y
Sbjct: 328 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 90.1 bits (222), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 89/175 (50%), Gaps = 27/175 (15%)
Query: 32 IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
+KP SNIV K+ DFGLAR G + T VVT +YRAPEV+LG Y VD+
Sbjct: 152 LKP-SNIVVKSDXTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 208
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT----------PTEDNWPGVSKLPDY 134
WS+GCI E+ K LF G IDQ ++ L T PT N+ V P Y
Sbjct: 209 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKY 266
Query: 135 KT-TFPEW---SNFCLD-KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
TFP+ S F D +H K DLL K L+ PA RI+ ++AL+H Y
Sbjct: 267 AGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 90.1 bits (222), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1 FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
C +IQ+E + YQ+ + A +KP SNIV K+ DFGLA
Sbjct: 116 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 174
Query: 48 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
R G + T VVT +YRAPEV+LG Y VD+WS+GCI E+ K LF G I
Sbjct: 175 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 232
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
DQ ++ L T PT N+ V P Y TFP+ S F D +H K
Sbjct: 233 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 290
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
DLL K L+ PA RI+ ++AL+H Y
Sbjct: 291 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 90.1 bits (222), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1 FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
C +IQ+E + YQ+ + A +KP SNIV K+ DFGLA
Sbjct: 116 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 174
Query: 48 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
R G + T VVT +YRAPEV+LG Y VD+WS+GCI E+ K LF G I
Sbjct: 175 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 232
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
DQ ++ L T PT N+ V P Y TFP+ S F D +H K
Sbjct: 233 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 290
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
DLL K L+ PA RI+ ++AL+H Y
Sbjct: 291 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 90.1 bits (222), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1 FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
C +IQ+E + YQ+ + A +KP SNIV K+ DFGLA
Sbjct: 114 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 172
Query: 48 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
R G + T VVT +YRAPEV+LG Y VD+WS+GCI E+ K LF G I
Sbjct: 173 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 230
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
DQ ++ L T PT N+ V P Y TFP+ S F D +H K
Sbjct: 231 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 288
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
DLL K L+ PA RI+ ++AL+H Y
Sbjct: 289 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 320
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 89/175 (50%), Gaps = 27/175 (15%)
Query: 32 IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
+KP SNIV K+ DFGLAR G + T VVT +YRAPEV+LG Y VD+
Sbjct: 152 LKP-SNIVVKSDXTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 208
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT----------PTEDNWPGVSKLPDY 134
WS+GCI E+ K LF G IDQ ++ L T PT N+ V P Y
Sbjct: 209 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKY 266
Query: 135 KT-TFPEW---SNFCLD-KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
TFP+ S F D +H K DLL K L+ PA RI+ ++AL+H Y
Sbjct: 267 AGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1 FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
C +IQ+E + YQ+ + A +KP SNIV K+ DFGLA
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 173
Query: 48 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
R G + T VVT +YRAPEV+LG Y VD+WS+GCI E+ K LF G I
Sbjct: 174 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 231
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
DQ ++ L T PT N+ V P Y TFP+ S F D +H K
Sbjct: 232 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 289
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
DLL K L+ PA RI+ ++AL+H Y
Sbjct: 290 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 89/175 (50%), Gaps = 27/175 (15%)
Query: 32 IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
+KP SNIV K+ DFGLAR G + T VVT +YRAPEV+LG Y VD+
Sbjct: 145 LKP-SNIVVKSDXTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 201
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT----------PTEDNWPGVSKLPDY 134
WS+GCI E+ K LF G IDQ ++ L T PT N+ V P Y
Sbjct: 202 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKY 259
Query: 135 KT-TFPEW---SNFCLD-KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
TFP+ S F D +H K DLL K L+ PA RI+ ++AL+H Y
Sbjct: 260 AGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1 FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
C +IQ+E + YQ+ + A +KP SNIV K+ DFGLA
Sbjct: 153 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 211
Query: 48 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
R G + T VVT +YRAPEV+LG Y VD+WS+GCI E+ K LF G I
Sbjct: 212 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 269
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
DQ ++ L T PT N+ V P Y TFP+ S F D +H K
Sbjct: 270 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 327
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
DLL K L+ PA RI+ ++AL+H Y
Sbjct: 328 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1 FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
C +IQ+E + YQ+ + A +KP SNIV K+ DFGLA
Sbjct: 109 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 167
Query: 48 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
R G + T VVT +YRAPEV+LG Y VD+WS+GCI E+ K LF G I
Sbjct: 168 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 225
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
DQ ++ L T PT N+ V P Y TFP+ S F D +H K
Sbjct: 226 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 283
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
DLL K L+ PA RI+ ++AL+H Y
Sbjct: 284 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1 FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
C +IQ+E + YQ+ + A +KP SNIV K+ DFGLA
Sbjct: 109 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 167
Query: 48 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
R G + T VVT +YRAPEV+LG Y VD+WS+GCI E+ K LF G I
Sbjct: 168 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 225
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
DQ ++ L T PT N+ V P Y TFP+ S F D +H K
Sbjct: 226 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 283
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
DLL K L+ PA RI+ ++AL+H Y
Sbjct: 284 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 89.7 bits (221), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1 FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
C +IQ+E + YQ+ + A +KP SNIV K+ DFGLA
Sbjct: 108 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 166
Query: 48 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
R G + T VVT +YRAPEV+LG Y VD+WS+GCI E+ K LF G I
Sbjct: 167 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 224
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
DQ ++ L T PT N+ V P Y TFP+ S F D +H K
Sbjct: 225 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 282
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
DLL K L+ PA RI+ ++AL+H Y
Sbjct: 283 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P + ++K+ DFG A+ G P Y + + +YRAPE++ G+ Y+ +
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI 204
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
DVWS GC+ AE+ +P+F GDS +DQL I +VL TPT + ++ P+Y FP+
Sbjct: 205 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFAFPQI 262
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
K + + + L + L Y P R+ A H +F + D
Sbjct: 263 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P + ++K+ DFG A+ G P Y + + +YRAPE++ G+ Y+ +
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI 204
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
DVWS GC+ AE+ +P+F GDS +DQL I +VL TPT + ++ P+Y FP+
Sbjct: 205 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 262
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
K + + + L + L Y P R+ A H +F + D
Sbjct: 263 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P + ++K+ DFG A+ G P Y + + +YRAPE++ G+ Y+ +
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI 204
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
DVWS GC+ AE+ +P+F GDS +DQL I +VL TPT + ++ P+Y FP+
Sbjct: 205 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 262
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
K + + + L + L Y P R+ A H +F + D
Sbjct: 263 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P + ++K+ DFG A+ G P Y + + +YRAPE++ G+ Y+ +
Sbjct: 161 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI 217
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
DVWS GC+ AE+ +P+F GDS +DQL I +VL TPT + ++ P+Y FP+
Sbjct: 218 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 275
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
K + + + L + L Y P R+ A H +F + D
Sbjct: 276 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 324
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P + ++K+ DFG A+ G P Y + + +YRAPE++ G+ Y+ +
Sbjct: 176 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI 232
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
DVWS GC+ AE+ +P+F GDS +DQL I +VL TPT + ++ P+Y FP+
Sbjct: 233 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 290
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
K + + + L + L Y P R+ A H +F + D
Sbjct: 291 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 339
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P + ++K+ DFG A+ G P Y + + +YRAPE++ G+ Y+ +
Sbjct: 153 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI 209
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
DVWS GC+ AE+ +P+F GDS +DQL I +VL TPT + ++ P+Y FP+
Sbjct: 210 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 267
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
K + + + L + L Y P R+ A H +F + D
Sbjct: 268 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 316
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P + ++K+ DFG A+ G P Y + + +YRAPE++ G+ Y+ +
Sbjct: 186 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI 242
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
DVWS GC+ AE+ +P+F GDS +DQL I +VL TPT + ++ P+Y FP+
Sbjct: 243 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 300
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
K + + + L + L Y P R+ A H +F + D
Sbjct: 301 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 349
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P + ++K+ DFG A+ G P Y + + +YRAPE++ G+ Y+ +
Sbjct: 184 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI 240
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
DVWS GC+ AE+ +P+F GDS +DQL I +VL TPT + ++ P+Y FP+
Sbjct: 241 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 298
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
K + + + L + L Y P R+ A H +F + D
Sbjct: 299 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 347
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P + ++K+ DFG A+ G P Y + + +YRAPE++ G+ Y+ +
Sbjct: 182 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI 238
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
DVWS GC+ AE+ +P+F GDS +DQL I +VL TPT + ++ P+Y FP+
Sbjct: 239 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 296
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
K + + + L + L Y P R+ A H +F + D
Sbjct: 297 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 345
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P + ++K+ DFG A+ G P Y + + +YRAPE++ G+ Y+ +
Sbjct: 227 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI 283
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
DVWS GC+ AE+ +P+F GDS +DQL I +VL TPT + ++ P+Y FP+
Sbjct: 284 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 341
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
K + + + L + L Y P R+ A H +F + D
Sbjct: 342 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 390
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P + ++K+ DFG A+ G P + + +YRAPE++ G+ Y+ +
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 204
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
DVWS GC+ AE+ +P+F GDS +DQL I +VL TPT + ++ P+Y FP+
Sbjct: 205 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFAFPQI 262
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
K + + + L + L Y P R+ A H +F + D
Sbjct: 263 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 85/177 (48%), Gaps = 31/177 (17%)
Query: 32 IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
+KP SNIV K+ DFGLAR + T VVT +YRAPEV+LG Y VD+
Sbjct: 150 LKP-SNIVVKSDCTLKILDFGLARTASTNF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 206
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED-----------------NWPG 127
WS+GCI E+ +FQG IDQ ++ L TP+ + +PG
Sbjct: 207 WSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPG 266
Query: 128 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
++ ++ FP+W + K DLL K L+ P RI+ + AL+H Y
Sbjct: 267 IA----FEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 319
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P + ++K+ DFG A+ G P + + +YRAPE++ G+ Y+ +
Sbjct: 149 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 205
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
DVWS GC+ AE+ +P+F GDS +DQL I +VL TPT + ++ P+Y FP+
Sbjct: 206 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 263
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
K + + + L + L Y P R+ A H +F + D
Sbjct: 264 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 312
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P + ++K+ DFG A+ G P + + +YRAPE++ G+ Y+ +
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 204
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
DVWS GC+ AE+ +P+F GDS +DQL I +VL TPT + ++ P+Y FP+
Sbjct: 205 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 262
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
K + + + L + L Y P R+ A H +F + D
Sbjct: 263 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 88/216 (40%), Gaps = 60/216 (27%)
Query: 31 CIKPKSNIVKVADFGLARAFGVP---------------------------VRIYTHEVVT 63
C+ + VKV DFGLAR P R T VVT
Sbjct: 187 CLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVT 246
Query: 64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI-----------ATRKPLFQGDS------- 105
WYRAPE++L + Y+ +DVWSIGCIFAE+ A R PLF G S
Sbjct: 247 RWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPD 306
Query: 106 -------------EIDQLFRIFRVLTTPTEDNWPGVSK--LPDYKTTFPEWSNFCLDKHV 150
DQL IF +L TP+E++ + K Y FP+ L +
Sbjct: 307 QKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERF 366
Query: 151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
D + LL++ L++ P RI L H +F +
Sbjct: 367 PASSADAIHLLKRMLVFNPNKRITINECLAHPFFKE 402
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P + ++K+ DFG A+ G P + + +YRAPE++ G+ Y+ +
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 204
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
DVWS GC+ AE+ +P+F GDS +DQL I +VL TPT + ++ P+Y FP+
Sbjct: 205 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 262
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
K + + + L + L Y P R+ A H +F + D
Sbjct: 263 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P + ++K+ DFG A+ G P + + +YRAPE++ G+ Y+ +
Sbjct: 152 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 208
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
DVWS GC+ AE+ +P+F GDS +DQL I +VL TPT + ++ P+Y FP+
Sbjct: 209 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 266
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
K + + + L + L Y P R+ A H +F + D
Sbjct: 267 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 315
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P + ++K+ DFG A+ G P + + +YRAPE++ G+ Y+ +
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 204
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
DVWS GC+ AE+ +P+F GDS +DQL I +VL TPT + ++ P+Y FP+
Sbjct: 205 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 262
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
K + + + L + L Y P R+ A H +F + D
Sbjct: 263 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P + ++K+ DFG A+ G P + + +YRAPE++ G+ Y+ +
Sbjct: 160 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 216
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
DVWS GC+ AE+ +P+F GDS +DQL I +VL TPT + ++ P+Y FP+
Sbjct: 217 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 274
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
K + + + L + L Y P R+ A H +F + D
Sbjct: 275 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 323
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P + ++K+ DFG A+ G P + + +YRAPE++ G+ Y+ +
Sbjct: 167 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 223
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
DVWS GC+ AE+ +P+F GDS +DQL I +VL TPT + ++ P+Y FP+
Sbjct: 224 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 281
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
K + + + L + L Y P R+ A H +F + D
Sbjct: 282 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 330
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P + ++K+ DFG A+ G P + + +YRAPE++ G+ Y+ +
Sbjct: 160 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 216
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
DVWS GC+ AE+ +P+F GDS +DQL I +VL TPT + ++ P+Y FP+
Sbjct: 217 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 274
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
K + + + L + L Y P R+ A H +F + D
Sbjct: 275 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 323
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P + ++K+ DFG A+ G P + + +YRAPE++ G+ Y+ +
Sbjct: 156 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 212
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
DVWS GC+ AE+ +P+F GDS +DQL I +VL TPT + ++ P+Y FP+
Sbjct: 213 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 270
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
K + + + L + L Y P R+ A H +F + D
Sbjct: 271 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 319
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 87.0 bits (214), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
++ + + P + ++K+ DFG A+ G P + + +YRAPE++ G+ Y+ +
Sbjct: 182 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 238
Query: 83 DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
DVWS GC+ AE+ +P+F GDS +DQL I +VL TPT + ++ P+Y FP+
Sbjct: 239 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 296
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
K + + + L + L Y P R+ A H +F + D
Sbjct: 297 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 345
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 86.7 bits (213), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 85/177 (48%), Gaps = 31/177 (17%)
Query: 32 IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
+KP SNIV K+ DFGLAR + T VVT +YRAPEV+LG Y+ VD+
Sbjct: 152 LKP-SNIVVKSDCTLKILDFGLARTACTNF-MMTPYVVTRYYRAPEVILG-MGYAANVDI 208
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED-----------------NWPG 127
WS+GCI E+ +FQG IDQ ++ L TP+ + +PG
Sbjct: 209 WSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPG 268
Query: 128 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ ++ FP+W + K DLL K L+ P RI+ + AL+H Y
Sbjct: 269 IK----FEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 321
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 97/214 (45%), Gaps = 37/214 (17%)
Query: 1 FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
C +IQ+E + YQ+ + A +KP SNIV K+ DFGLA
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 173
Query: 48 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
R G + EVVT +YRAPEV+LG Y VD+WS+GCI E+ K LF G I
Sbjct: 174 RTAGTSF-MMEPEVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVCHKILFPGRDYI 231
Query: 108 DQLFRIFRVLTTPTEDNWPGVSK-----LPDYKTTFPEWSNFCLDK------------HV 150
DQ ++ L TP P K + +Y P+++ + +K H
Sbjct: 232 DQWNKVIEQLGTPC----PAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHN 287
Query: 151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
K DLL K L+ + RI+ + AL+H Y
Sbjct: 288 KLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 96/210 (45%), Gaps = 29/210 (13%)
Query: 1 FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
C +IQ+E + YQ+ + A +KP SNIV K+ DFGLA
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 173
Query: 48 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
R G + EVVT +YRAPEV+LG Y VD+WS+GCI E+ K LF G I
Sbjct: 174 RTAGTSF-MMEPEVVTRYYRAPEVILG-MGYKENVDLWSVGCIMGEMVCHKILFPGRDYI 231
Query: 108 DQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSNFCLDK------------HVKNLD 154
DQ ++ L TP + + + Y P+++ + +K H K
Sbjct: 232 DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 291
Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF 184
DLL K L+ + RI+ + AL+H Y
Sbjct: 292 SQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 16/173 (9%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
L+ ++ +K + + K+ DFGLAR G + T VVT +YRAPEV+LG Y VD+
Sbjct: 152 LKPSNIVVKSDATL-KILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 208
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSN 143
WS+GCI E+ LF G IDQ ++ L TP+ + + + Y P+++
Sbjct: 209 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAG 268
Query: 144 FCLDK------------HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ +K H K DLL K L+ + RI+ + AL+H Y
Sbjct: 269 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 16/173 (9%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
L+ ++ +K + + K+ DFGLAR G + T VVT +YRAPEV+LG Y VD+
Sbjct: 152 LKPSNIVVKSDATL-KILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 208
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSN 143
WS+GCI E+ LF G IDQ ++ L TP+ + + + Y P+++
Sbjct: 209 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAG 268
Query: 144 FCLDK------------HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ +K H K DLL K L+ + RI+ + AL+H Y
Sbjct: 269 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 16/173 (9%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
L+ ++ +K + + K+ DFGLAR G + T VVT +YRAPEV+LG Y VD+
Sbjct: 152 LKPSNIVVKSDATL-KILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 208
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSN 143
WS+GCI E+ LF G IDQ ++ L TP+ + + + Y P+++
Sbjct: 209 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAG 268
Query: 144 FCLDK------------HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ +K H K DLL K L+ + RI+ + AL+H Y
Sbjct: 269 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 96/210 (45%), Gaps = 29/210 (13%)
Query: 1 FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
C +IQ+E + YQ+ + A +KP SNIV K+ DFGLA
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 173
Query: 48 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
R G + T VVT +YRAPEV+LG Y VD+WS+GCI E+ LF G I
Sbjct: 174 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
Query: 108 DQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSNFCLDK------------HVKNLD 154
DQ ++ L TP+ + + + Y P+++ + +K H K
Sbjct: 232 DQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 291
Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF 184
DLL K L+ + RI+ + AL+H Y
Sbjct: 292 SQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 96/210 (45%), Gaps = 29/210 (13%)
Query: 1 FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
C +IQ+E + YQ+ + A +KP SNIV K+ DFGLA
Sbjct: 120 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 178
Query: 48 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
R G + T VVT +YRAPEV+LG Y VD+WS+GCI E+ K LF G I
Sbjct: 179 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDLWSVGCIMGEMVCHKILFPGRDYI 236
Query: 108 DQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSNFCLDK------------HVKNLD 154
DQ ++ L TP + + + Y P+++ + +K H K
Sbjct: 237 DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 296
Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF 184
DLL K L+ + RI+ + AL+H Y
Sbjct: 297 SQARDLLSKMLVIDASKRISVDEALQHPYI 326
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 96/210 (45%), Gaps = 29/210 (13%)
Query: 1 FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
C +IQ+E + YQ+ + A +KP SNIV K+ DFGLA
Sbjct: 109 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 167
Query: 48 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
R G + T VVT +YRAPEV+LG Y VD+WS+GCI E+ K LF G I
Sbjct: 168 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDLWSVGCIMGEMVCHKILFPGRDYI 225
Query: 108 DQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSNFCLDK------------HVKNLD 154
DQ ++ L TP + + + Y P+++ + +K H K
Sbjct: 226 DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 285
Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF 184
DLL K L+ + RI+ + AL+H Y
Sbjct: 286 SQARDLLSKMLVIDASKRISVDEALQHPYI 315
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 95/210 (45%), Gaps = 29/210 (13%)
Query: 1 FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
C +IQ+E + YQ+ + A +KP SNIV K+ DFGLA
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 173
Query: 48 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
R G + T EVVT +YRAPEV+LG Y VD+WS+GCI E+ LF G I
Sbjct: 174 RTAGTSF-MMTPEVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
Query: 108 DQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSNFCLDK------------HVKNLD 154
DQ ++ L TP + + + Y P+++ + +K H
Sbjct: 232 DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKA 291
Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF 184
DLL K L+ + RI+ + AL+H Y
Sbjct: 292 SQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 84/173 (48%), Gaps = 23/173 (13%)
Query: 32 IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
+KP SNIV K+ DFGLAR G + T VVT +YRAPEV+LG Y VD+
Sbjct: 152 LKP-SNIVVKSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 208
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSN 143
WS+GCI E+ LF G IDQ ++ L TP+ + + + Y P+++
Sbjct: 209 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAG 268
Query: 144 FCLDK------------HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ +K H K DLL K L+ + RI+ + AL+H Y
Sbjct: 269 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 36 SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+N + + DF LAR TH V WYRAPE+++ + ++ VD+WS GC+ AE+
Sbjct: 170 NNDITICDFNLAREDTADAN-KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDY-KTTFPEWSNFCLDKHVKN 152
RK LF+G + +QL +I V+ TP ++ S DY + + V
Sbjct: 229 NRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT 288
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
D LDL+ K L + P RI+ E AL+H YF
Sbjct: 289 ADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 83.2 bits (204), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 36 SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+N + + DF LAR TH V WYRAPE+++ + ++ VD+WS GC+ AE+
Sbjct: 170 NNDITICDFNLAREDTADAN-KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDY-KTTFPEWSNFCLDKHVKN 152
RK LF+G + +QL +I V+ TP ++ S DY + + V
Sbjct: 229 NRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT 288
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
D LDL+ K L + P RI+ E AL+H YF
Sbjct: 289 ADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 95/210 (45%), Gaps = 29/210 (13%)
Query: 1 FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
C +IQ+E + YQ+ + A +KP SNIV K+ DFGLA
Sbjct: 116 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 174
Query: 48 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
R G + T VVT +YRAPEV+LG Y VD+WS+GCI E+ LF G I
Sbjct: 175 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 232
Query: 108 DQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSNFCLDK------------HVKNLD 154
DQ ++ L TP + + + Y P+++ + +K H K
Sbjct: 233 DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 292
Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF 184
DLL K L+ + RI+ + AL+H Y
Sbjct: 293 SQARDLLSKMLVIDASKRISVDEALQHPYI 322
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 95/210 (45%), Gaps = 29/210 (13%)
Query: 1 FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
C +IQ+E + YQ+ + A +KP SNIV K+ DFGLA
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 173
Query: 48 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
R G + T VVT +YRAPEV+LG Y VD+WS+GCI E+ LF G I
Sbjct: 174 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
Query: 108 DQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSNFCLDK------------HVKNLD 154
DQ ++ L TP + + + Y P+++ + +K H K
Sbjct: 232 DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 291
Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF 184
DLL K L+ + RI+ + AL+H Y
Sbjct: 292 SQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 14/167 (8%)
Query: 29 SFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIG 88
+ I + +++ D+GLA F P + Y V + +++ PE+L+ Q Y +D+WS+G
Sbjct: 162 NVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLG 220
Query: 89 CIFAE-IATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL-----PDYKTTFPE-- 140
C+ A I R+P F G DQL RI +VL TE+ + + K P + +
Sbjct: 221 CMLASMIFRREPFFHGQDNYDQLVRIAKVLG--TEELYGYLKKYHIDLDPHFNDILGQHS 278
Query: 141 ---WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
W NF ++ + + LDLL+K L Y R+ A+ A++H YF
Sbjct: 279 RKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 14/171 (8%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
++ + I + +++ D+GLA F P + Y V + +++ PE+L+ Q Y +D+
Sbjct: 163 VKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDM 221
Query: 85 WSIGCIFAE-IATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL-----PDYKTTF 138
WS+GC+ A I R+P F G DQL RI +VL TE+ + + K P +
Sbjct: 222 WSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLG--TEELYGYLKKYHIDLDPHFNDIL 279
Query: 139 PE-----WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ W NF ++ + + LDLL+K L Y R+ A+ A++H YF
Sbjct: 280 GQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9 WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
++ + Y ++ L+A +C +KP + ++ ++ D+GLA F
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 183
Query: 53 PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
P + Y V + +++ PE+L+ Q Y +D+WS+GC+ A + RK P F G DQL
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
RI +VL TED + + K P + + + W F ++ + + LD L
Sbjct: 244 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 162 EKTLIYCPATRINAENALKHKYF 184
+K L Y +R+ A A++H YF
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9 WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
++ + Y ++ L+A +C +KP + ++ ++ D+GLA F
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 183
Query: 53 PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
P + Y V + +++ PE+L+ Q Y +D+WS+GC+ A + RK P F G DQL
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
RI +VL TED + + K P + + + W F ++ + + LD L
Sbjct: 244 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 162 EKTLIYCPATRINAENALKHKYF 184
+K L Y +R+ A A++H YF
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9 WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
++ + Y ++ L+A +C +KP + ++ ++ D+GLA F
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 183
Query: 53 PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
P + Y V + +++ PE+L+ Q Y +D+WS+GC+ A + RK P F G DQL
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
RI +VL TED + + K P + + + W F ++ + + LD L
Sbjct: 244 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 162 EKTLIYCPATRINAENALKHKYF 184
+K L Y +R+ A A++H YF
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9 WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
++ + Y ++ L+A +C +KP + ++ ++ D+GLA F
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 183
Query: 53 PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
P + Y V + +++ PE+L+ Q Y +D+WS+GC+ A + RK P F G DQL
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
RI +VL TED + + K P + + + W F ++ + + LD L
Sbjct: 244 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 162 EKTLIYCPATRINAENALKHKYF 184
+K L Y +R+ A A++H YF
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9 WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
++ + Y ++ L+A +C +KP + ++ ++ D+GLA F
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 183
Query: 53 PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
P + Y V + +++ PE+L+ Q Y +D+WS+GC+ A + RK P F G DQL
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
RI +VL TED + + K P + + + W F ++ + + LD L
Sbjct: 244 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 162 EKTLIYCPATRINAENALKHKYF 184
+K L Y +R+ A A++H YF
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9 WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
++ + Y ++ L+A +C +KP + ++ ++ D+GLA F
Sbjct: 124 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 182
Query: 53 PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
P + Y V + +++ PE+L+ Q Y +D+WS+GC+ A + RK P F G DQL
Sbjct: 183 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 242
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
RI +VL TED + + K P + + + W F ++ + + LD L
Sbjct: 243 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 300
Query: 162 EKTLIYCPATRINAENALKHKYF 184
+K L Y +R+ A A++H YF
Sbjct: 301 DKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9 WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
++ + Y ++ L+A +C +KP + ++ ++ D+GLA F
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 183
Query: 53 PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
P + Y V + +++ PE+L+ Q Y +D+WS+GC+ A + RK P F G DQL
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
RI +VL TED + + K P + + + W F ++ + + LD L
Sbjct: 244 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 162 EKTLIYCPATRINAENALKHKYF 184
+K L Y +R+ A A++H YF
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9 WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
++ + Y ++ L+A +C +KP + ++ ++ D+GLA F
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 183
Query: 53 PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
P + Y V + +++ PE+L+ Q Y +D+WS+GC+ A + RK P F G DQL
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
RI +VL TED + + K P + + + W F ++ + + LD L
Sbjct: 244 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 162 EKTLIYCPATRINAENALKHKYF 184
+K L Y +R+ A A++H YF
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9 WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
++ + Y ++ L+A +C +KP + ++ ++ D+GLA F
Sbjct: 123 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 181
Query: 53 PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
P + Y V + +++ PE+L+ Q Y +D+WS+GC+ A + RK P F G DQL
Sbjct: 182 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 241
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
RI +VL TED + + K P + + + W F ++ + + LD L
Sbjct: 242 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 299
Query: 162 EKTLIYCPATRINAENALKHKYF 184
+K L Y +R+ A A++H YF
Sbjct: 300 DKLLRYDHQSRLTAREAMEHPYF 322
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9 WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
++ + Y ++ L+A +C +KP + ++ ++ D+GLA F
Sbjct: 124 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 182
Query: 53 PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
P + Y V + +++ PE+L+ Q Y +D+WS+GC+ A + RK P F G DQL
Sbjct: 183 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 242
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
RI +VL TED + + K P + + + W F ++ + + LD L
Sbjct: 243 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 300
Query: 162 EKTLIYCPATRINAENALKHKYF 184
+K L Y +R+ A A++H YF
Sbjct: 301 DKLLRYDHQSRLTAREAMEHPYF 323
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9 WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
++ + Y ++ L+A +C +KP + ++ ++ D+GLA F
Sbjct: 130 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 188
Query: 53 PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
P + Y V + +++ PE+L+ Q Y +D+WS+GC+ A + RK P F G DQL
Sbjct: 189 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 248
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
RI +VL TED + + K P + + + W F ++ + + LD L
Sbjct: 249 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 306
Query: 162 EKTLIYCPATRINAENALKHKYF 184
+K L Y +R+ A A++H YF
Sbjct: 307 DKLLRYDHQSRLTAREAMEHPYF 329
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9 WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
++ + Y ++ L+A +C +KP + ++ ++ D+GLA F
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 183
Query: 53 PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
P + Y V + +++ PE+L+ Q Y +D+WS+GC+ A + RK P F G DQL
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
RI +VL TED + + K P + + + W F ++ + + LD L
Sbjct: 244 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 162 EKTLIYCPATRINAENALKHKYF 184
+K L Y +R+ A A++H YF
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9 WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
++ + Y ++ L+A +C +KP + ++ ++ D+GLA F
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLA-EFYH 183
Query: 53 PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
P + Y V + +++ PE+L+ Q Y +D+WS+GC+ A + RK P F G DQL
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
RI +VL TED + + K P + + + W F ++ + + LD L
Sbjct: 244 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 162 EKTLIYCPATRINAENALKHKYF 184
+K L Y +R+ A A++H YF
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9 WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
++ + Y ++ L+A +C +KP + ++ ++ D+GLA F
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYH 183
Query: 53 PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
P + Y V + +++ PE+L+ Q Y +D+WS+GC+ A + RK P F G DQL
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
RI +VL TED + + K P + + + W F ++ + + LD L
Sbjct: 244 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 162 EKTLIYCPATRINAENALKHKYF 184
+K L Y +R+ A A++H YF
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 16/173 (9%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
L+ ++ +K + + K+ DFGLAR G + T VVT +YRAPEV+LG Y VD+
Sbjct: 152 LKPSNIVVKSDATL-KILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 208
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSN 143
WS+G I E+ LF G IDQ ++ L TP+ + + + Y P+++
Sbjct: 209 WSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAG 268
Query: 144 FCLDK------------HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ +K H K DLL K L+ + RI+ + AL+H Y
Sbjct: 269 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 16/173 (9%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
L+ ++ +K + + K+ DFGLAR G + T VVT +YRAPEV+LG Y VD+
Sbjct: 152 LKPSNIVVKSDATL-KILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 208
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSN 143
WS+G I E+ LF G IDQ ++ L TP+ + + + Y P+++
Sbjct: 209 WSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAG 268
Query: 144 FCLDK------------HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ +K H K DLL K L+ + RI+ + AL+H Y
Sbjct: 269 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 94/210 (44%), Gaps = 29/210 (13%)
Query: 1 FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
C +IQ+E + YQ+ + A +KP SNIV K+ DFGLA
Sbjct: 117 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 175
Query: 48 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
R G + VVT +YRAPEV+LG Y VD+WS+GCI E+ LF G I
Sbjct: 176 RTAGTSFMMVPF-VVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 233
Query: 108 DQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSNFCLDK------------HVKNLD 154
DQ ++ L TP + + + Y P+++ + +K H K
Sbjct: 234 DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 293
Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF 184
DLL K L+ + RI+ + AL+H Y
Sbjct: 294 SQARDLLSKMLVIDASKRISVDEALQHPYI 323
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 30/197 (15%)
Query: 15 YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
Y ++ L+A +C +KP + ++ ++ D+GLA F P + Y
Sbjct: 131 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYN 189
Query: 59 HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
V + +++ PE+L+ Q Y +D+WS+GC+ A + RK P F G DQL RI +VL
Sbjct: 190 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 118 TTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIY 167
TED + + K P + + + W F ++ + + LD L+K L Y
Sbjct: 250 G--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRY 307
Query: 168 CPATRINAENALKHKYF 184
+R+ A A++H YF
Sbjct: 308 DHQSRLTAREAMEHPYF 324
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 84/191 (43%), Gaps = 39/191 (20%)
Query: 34 PKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
PK + +K+ DFG + G RIY + + +YR+PEVLLG Y +D+WS+GCI E
Sbjct: 195 PKRSAIKIVDFGSSCQLGQ--RIY-QXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVE 250
Query: 94 IATRKPLFQGDSEIDQLFRIFRVLTTP---------------------------TEDNW- 125
+ T +PLF G +E+DQ+ +I VL P T+D
Sbjct: 251 MHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKR 310
Query: 126 ----PGVSKLPD---YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA 178
PG KL + +T P H DL+ + L Y P TRI A
Sbjct: 311 EYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYA 370
Query: 179 LKHKYFADKTD 189
L+H +F D
Sbjct: 371 LQHSFFKKTAD 381
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 84/191 (43%), Gaps = 39/191 (20%)
Query: 34 PKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
PK + +K+ DFG + G RIY + + +YR+PEVLLG Y +D+WS+GCI E
Sbjct: 176 PKRSAIKIVDFGSSCQLGQ--RIY-QXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVE 231
Query: 94 IATRKPLFQGDSEIDQLFRIFRVLTTP---------------------------TEDNW- 125
+ T +PLF G +E+DQ+ +I VL P T+D
Sbjct: 232 MHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKR 291
Query: 126 ----PGVSKLPD---YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA 178
PG KL + +T P H DL+ + L Y P TRI A
Sbjct: 292 EYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYA 351
Query: 179 LKHKYFADKTD 189
L+H +F D
Sbjct: 352 LQHSFFKKTAD 362
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 83/191 (43%), Gaps = 39/191 (20%)
Query: 34 PKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
PK +K+ DFG + G RIY + + +YR+PEVLLG Y +D+WS+GCI E
Sbjct: 195 PKRXAIKIVDFGSSCQLGQ--RIY-QXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVE 250
Query: 94 IATRKPLFQGDSEIDQLFRIFRVLTTP---------------------------TEDNW- 125
+ T +PLF G +E+DQ+ +I VL P T+D
Sbjct: 251 MHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKR 310
Query: 126 ----PGVSKLPD---YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA 178
PG KL + +T P H DL+ + L Y P TRI A
Sbjct: 311 EYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYA 370
Query: 179 LKHKYFADKTD 189
L+H +F D
Sbjct: 371 LQHSFFKKTAD 381
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 15 YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
Y ++ L+A +C +KP + ++ ++ D+GLA F P + Y
Sbjct: 146 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN 204
Query: 59 HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
V + +++ PE+L+ Q Y +D+WS+GC+FA + RK P F G DQL +I +VL
Sbjct: 205 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 264
Query: 118 TTPTEDNW---------PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 168
T + + P + L + P W F + + + +D L+K L Y
Sbjct: 265 GTDGLNAYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYD 323
Query: 169 PATRINAENALKHKYF 184
R+ A A+ H YF
Sbjct: 324 HQERLTALEAMTHPYF 339
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 15 YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
Y ++ L+A +C +KP + ++ ++ D+GLA F P + Y
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN 183
Query: 59 HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
V + +++ PE+L+ Q Y +D+WS+GC+FA + RK P F G DQL +I +VL
Sbjct: 184 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 118 TTPTEDNW---------PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 168
T + + P + L + P W F + + + +D L+K L Y
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYD 302
Query: 169 PATRINAENALKHKYF 184
R+ A A+ H YF
Sbjct: 303 HQERLTALEAMTHPYF 318
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 15 YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
Y ++ L+A +C +KP + ++ ++ D+GLA F P + Y
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN 183
Query: 59 HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
V + +++ PE+L+ Q Y +D+WS+GC+FA + RK P F G DQL +I +VL
Sbjct: 184 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 118 TTPTEDNW---------PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 168
T + + P + L + P W F + + + +D L+K L Y
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYD 302
Query: 169 PATRINAENALKHKYF 184
R+ A A+ H YF
Sbjct: 303 HQERLTALEAMTHPYF 318
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 15 YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
Y ++ L+A +C +KP + ++ ++ D+GLA F P + Y
Sbjct: 126 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN 184
Query: 59 HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
V + +++ PE+L+ Q Y +D+WS+GC+FA + RK P F G DQL +I +VL
Sbjct: 185 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 244
Query: 118 TTPTEDNW---------PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 168
T + + P + L + P W F + + + +D L+K L Y
Sbjct: 245 GTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYD 303
Query: 169 PATRINAENALKHKYF 184
R+ A A+ H YF
Sbjct: 304 HQERLTALEAMTHPYF 319
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 15 YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
Y ++ L+A +C +KP + ++ ++ D+GLA F P + Y
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN 183
Query: 59 HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
V + +++ PE+L+ Q Y +D+WS+GC+FA + RK P F G DQL +I +VL
Sbjct: 184 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 118 TTPTEDNW---------PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 168
T + + P + L + P W F + + + +D L+K L Y
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYD 302
Query: 169 PATRINAENALKHKYF 184
R+ A A+ H YF
Sbjct: 303 HQERLTALEAMTHPYF 318
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 15 YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
Y ++ L+A +C +KP + ++ ++ D+GLA F P + Y
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN 183
Query: 59 HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
V + +++ PE+L+ Q Y +D+WS+GC+FA + RK P F G DQL +I +VL
Sbjct: 184 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 118 TTPTEDNW---------PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 168
T + + P + L + P W F + + + +D L+K L Y
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYD 302
Query: 169 PATRINAENALKHKYF 184
R+ A A+ H YF
Sbjct: 303 HQERLTALEAMTHPYF 318
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 15 YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
Y ++ L+A +C +KP + ++ ++ D+GLA F P + Y
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN 183
Query: 59 HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
V + +++ PE+L+ Q Y +D+WS+GC+FA + RK P F G DQL +I +VL
Sbjct: 184 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 118 TTPTEDNW---------PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 168
T + + P + L + P W F + + + +D L+K L Y
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYD 302
Query: 169 PATRINAENALKHKYF 184
R+ A A+ H YF
Sbjct: 303 HQERLTALEAMTHPYF 318
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 15 YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
Y ++ L+A +C +KP + ++ ++ D+GLA F P + Y
Sbjct: 126 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN 184
Query: 59 HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
V + +++ PE+L+ Q Y +D+WS+GC+FA + RK P F G DQL +I +VL
Sbjct: 185 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 244
Query: 118 TTPTEDNW---------PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 168
T + + P + L + P W F + + + +D L+K L Y
Sbjct: 245 GTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYD 303
Query: 169 PATRINAENALKHKYF 184
R+ A A+ H YF
Sbjct: 304 HQERLTALEAMTHPYF 319
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 15 YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
Y ++ L+A +C +KP + ++ ++ D+GLA F P + Y
Sbjct: 127 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN 185
Query: 59 HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
V + +++ PE+L+ Q Y +D+WS+GC+FA + RK P F G DQL +I +VL
Sbjct: 186 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 245
Query: 118 TTPTEDNW---------PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 168
T + + P + L + P W F + + + +D L+K L Y
Sbjct: 246 GTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYD 304
Query: 169 PATRINAENALKHKYF 184
R+ A A+ H YF
Sbjct: 305 HQERLTALEAMTHPYF 320
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 15 YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
Y ++ L+A +C +KP + ++ ++ D+GLA F P + Y
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN 183
Query: 59 HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
V + +++ PE+L+ Q Y +D+WS+GC+FA + RK P F G DQL +I +VL
Sbjct: 184 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 118 TTPTEDNW---------PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 168
T + + P + L + P W F + + + +D L+K L Y
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYD 302
Query: 169 PATRINAENALKHKYF 184
R+ A A+ H YF
Sbjct: 303 HQERLTALEAMTHPYF 318
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 34/187 (18%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+KV DFG + R+YT + + +YRAPEV+LG+ RY P+D+WS+GCI AE+ T
Sbjct: 241 IKVIDFG--SSCYEHQRVYT-XIQSRFYRAPEVILGA-RYGMPIDMWSLGCILAELLTGY 296
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTE---------DNWPGVSKLPDY--KTTFPEWSNFCLD 147
PL G+ E DQL + +L P++ N+ P Y TT + S
Sbjct: 297 PLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNG 356
Query: 148 KHVKNLDQDG-------------------LDLLEKTLIYCPATRINAENALKHKYFADKT 188
+ G LD L++ L + PA R+ AL+H + +
Sbjct: 357 GRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRL 416
Query: 189 DLPKFAE 195
P E
Sbjct: 417 PKPPTGE 423
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+KV DFG + R+YT + + +YRAPEV+LG+ RY P+D+WS+GCI AE+ T
Sbjct: 241 IKVIDFG--SSCYEHQRVYT-XIQSRFYRAPEVILGA-RYGMPIDMWSLGCILAELLTGY 296
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTE 122
PL G+ E DQL + +L P++
Sbjct: 297 PLLPGEDEGDQLACMIELLGMPSQ 320
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 81/192 (42%), Gaps = 44/192 (22%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVV-----TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
+KV DFG + Y H+ V + +YRAPEV+LG+ RY P+D+WS+GCI AE
Sbjct: 241 IKVIDFGSS--------CYEHQRVYXXIQSRFYRAPEVILGA-RYGMPIDMWSLGCILAE 291
Query: 94 IATRKPLFQGDSEIDQLFRIFRVLTTPTE---------DNWPGVSKLPDY--KTTFPEWS 142
+ T PL G+ E DQL + +L P + N+ P Y TT + S
Sbjct: 292 LLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGS 351
Query: 143 NFCLDKHVKNLDQDG-------------------LDLLEKTLIYCPATRINAENALKHKY 183
+ G LD L++ L + PA R+ AL+H +
Sbjct: 352 VVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPW 411
Query: 184 FADKTDLPKFAE 195
+ P E
Sbjct: 412 LRRRLPKPPTGE 423
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 28/152 (18%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K K +++ DFGL+ F ++ ++ T +Y APEVL G+ C DVWS G I
Sbjct: 168 KSKDANIRIIDFGLSTHFEASKKM-KDKIGTAYYIAPEVLHGTYDEKC--DVWSTGVILY 224
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
+ + P F G +E D L ++ + Y P+W K
Sbjct: 225 ILLSGCPPFNGANEYDILKKVEK----------------GKYTFELPQW---------KK 259
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ + DL+ K L Y P+ RI+A +AL H++
Sbjct: 260 VSESAKDLIRKMLTYVPSMRISARDALDHEWI 291
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 28/152 (18%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K K +++ DFGL+ F ++ ++ T +Y APEVL G+ C DVWS G I
Sbjct: 162 KSKDANIRIIDFGLSTHFEASKKM-KDKIGTAYYIAPEVLHGTYDEKC--DVWSTGVILY 218
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
+ + P F G +E D L ++ + Y P+W K
Sbjct: 219 ILLSGCPPFNGANEYDILKKVEK----------------GKYTFELPQW---------KK 253
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ + DL+ K L Y P+ RI+A +AL H++
Sbjct: 254 VSESAKDLIRKMLTYVPSMRISARDALDHEWI 285
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 28/152 (18%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K K +++ DFGL+ F ++ ++ T +Y APEVL G+ C DVWS G I
Sbjct: 185 KSKDANIRIIDFGLSTHFEASKKM-KDKIGTAYYIAPEVLHGTYDEKC--DVWSTGVILY 241
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
+ + P F G +E D L ++ + Y P+W K
Sbjct: 242 ILLSGCPPFNGANEYDILKKVEK----------------GKYTFELPQW---------KK 276
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ + DL+ K L Y P+ RI+A +AL H++
Sbjct: 277 VSESAKDLIRKMLTYVPSMRISARDALDHEWI 308
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 28/152 (18%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K K +++ DFGL+ F ++ ++ T +Y APEVL G+ C DVWS G I
Sbjct: 186 KSKDANIRIIDFGLSTHFEASKKM-KDKIGTAYYIAPEVLHGTYDEKC--DVWSTGVILY 242
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
+ + P F G +E D L ++ + Y P+W K
Sbjct: 243 ILLSGCPPFNGANEYDILKKVEK----------------GKYTFELPQW---------KK 277
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ + DL+ K L Y P+ RI+A +AL H++
Sbjct: 278 VSESAKDLIRKMLTYVPSMRISARDALDHEWI 309
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 28/152 (18%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K K +++ DFGL+ F + ++ T +Y APEVL G+ C DVWS G I
Sbjct: 162 KSKDANIRIIDFGLSTHFEASKKX-KDKIGTAYYIAPEVLHGTYDEKC--DVWSTGVILY 218
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
+ + P F G +E D L ++ + Y P+W K
Sbjct: 219 ILLSGCPPFNGANEYDILKKVEK----------------GKYTFELPQW---------KK 253
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ + DL+ K L Y P+ RI+A +AL H++
Sbjct: 254 VSESAKDLIRKXLTYVPSXRISARDALDHEWI 285
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K K +K+ DFGL+ F ++ + T +Y APEVL G+ C DVWS G I
Sbjct: 157 KEKDCDIKIIDFGLSTCFQQNTKM-KDRIGTAYYIAPEVLRGTYDEKC--DVWSAGVILY 213
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
+ + P F G +E D L R+ + Y P+W +
Sbjct: 214 ILLSGTPPFYGKNEYDILKRV----------------ETGKYAFDLPQW---------RT 248
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKH 181
+ D DL+ K L + P+ RI A L+H
Sbjct: 249 ISDDAKDLIRKMLTFHPSLRITATQCLEH 277
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K K +K+ DFGL+ F ++ + T +Y APEVL G+ C DVWS G I
Sbjct: 157 KEKDCDIKIIDFGLSTCFQQNTKM-KDRIGTAYYIAPEVLRGTYDEKC--DVWSAGVILY 213
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
+ + P F G +E D L R+ + Y P+W +
Sbjct: 214 ILLSGTPPFYGKNEYDILKRV----------------ETGKYAFDLPQW---------RT 248
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKH 181
+ D DL+ K L + P+ RI A L+H
Sbjct: 249 ISDDAKDLIRKMLTFHPSLRITATQCLEH 277
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 35/168 (20%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K K +K+ DFGL+ F ++ + T +Y APEVL G+ C DVWS G I
Sbjct: 157 KEKDCDIKIIDFGLSTCFQQNTKM-KDRIGTAYYIAPEVLRGTYDEKC--DVWSAGVILY 213
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
+ + P F G +E D L R+ + Y P+W +
Sbjct: 214 ILLSGTPPFYGKNEYDILKRV----------------ETGKYAFDLPQW---------RT 248
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKH----KYFADK---TDLPKF 193
+ D DL+ K L + P+ RI A L+H KY ++ +DLP
Sbjct: 249 ISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSL 296
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 69/171 (40%), Gaps = 29/171 (16%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHE-----VVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
KS V+V DFG A + HE V T YRAPEV+L +S P DVWSIGC
Sbjct: 191 KSTAVRVVDFGSA--------TFDHEHHSTIVSTRHYRAPEVIL-ELGWSQPCDVWSIGC 241
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW-SNFCLDK 148
I E LFQ + L + R+L K + +W N +
Sbjct: 242 IIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGR 301
Query: 149 HVK--------------NLDQDGLDLLEKTLIYCPATRINAENALKHKYFA 185
+V+ DL+E L Y PA R+ AL+H +FA
Sbjct: 302 YVRENCKPLRRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFFA 352
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 32/151 (21%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K K ++K+ DFGL+ F ++ + T +Y APEVL ++Y DVWSIG I
Sbjct: 172 KEKDALIKIVDFGLSAVFENQKKM-KERLGTAYYIAPEVL--RKKYDEKCDVWSIGVILF 228
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTF--PEWSNFCLDKHV 150
+ P F G + DQ I R K+ K TF PEW
Sbjct: 229 ILLAGYPPFGG--QTDQ--EILR--------------KVEKGKYTFDSPEW--------- 261
Query: 151 KNLDQDGLDLLEKTLIYCPATRINAENALKH 181
KN+ + DL+++ L + RI+A+ AL+H
Sbjct: 262 KNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 74/174 (42%), Gaps = 29/174 (16%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHE-----VVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
K+ ++VADFG A + HE V T YR PEV+L ++ P DVWSIGC
Sbjct: 209 KNTSIRVADFGSA--------TFDHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGC 259
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIFRVLT-TPTEDNWPGVSKLPDYKTTFPEWSNFCLDK 148
I E LFQ + L + ++L P+ + YK N +
Sbjct: 260 ILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGR 319
Query: 149 HVKN--------LDQDGL------DLLEKTLIYCPATRINAENALKHKYFADKT 188
+VK + QD L DL+ + L + PA RI AL H +FA T
Sbjct: 320 YVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT 373
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 69/163 (42%), Gaps = 23/163 (14%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+KV DFG A ++ V T YRAPEV+L + +S P DVWSIGCI E
Sbjct: 176 IKVVDFGSA---TYDDEHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGF 231
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN--------------- 143
+F + L + R+L + K + +W
Sbjct: 232 TVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPL 291
Query: 144 --FCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
F L + V++ + DL++K L Y PA RI ALKH +F
Sbjct: 292 KEFMLSQDVEH--ERLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 74/174 (42%), Gaps = 29/174 (16%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHE-----VVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
K+ ++VADFG A + HE V T YR PEV+L ++ P DVWSIGC
Sbjct: 186 KNTSIRVADFGSA--------TFDHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGC 236
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIFRVLT-TPTEDNWPGVSKLPDYKTTFPEWSNFCLDK 148
I E LFQ + L + ++L P+ + YK N +
Sbjct: 237 ILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGR 296
Query: 149 HVKN--------LDQDGL------DLLEKTLIYCPATRINAENALKHKYFADKT 188
+VK + QD L DL+ + L + PA RI AL H +FA T
Sbjct: 297 YVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT 350
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 74/174 (42%), Gaps = 29/174 (16%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHE-----VVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
K+ ++VADFG A + HE V T YR PEV+L ++ P DVWSIGC
Sbjct: 177 KNTSIRVADFGSA--------TFDHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGC 227
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIFRVLT-TPTEDNWPGVSKLPDYKTTFPEWSNFCLDK 148
I E LFQ + L + ++L P+ + YK N +
Sbjct: 228 ILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGR 287
Query: 149 HVKN--------LDQDGL------DLLEKTLIYCPATRINAENALKHKYFADKT 188
+VK + QD L DL+ + L + PA RI AL H +FA T
Sbjct: 288 YVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT 341
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 68/163 (41%), Gaps = 23/163 (14%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+KV DFG A ++ V YRAPEV+L + +S P DVWSIGCI E
Sbjct: 176 IKVVDFGSA---TYDDEHHSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGF 231
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN--------------- 143
+F + L + R+L + K + +W
Sbjct: 232 TVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPL 291
Query: 144 --FCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
F L + V++ + DL++K L Y PA RI ALKH +F
Sbjct: 292 KEFMLSQDVEH--ERLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 37/169 (21%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K + ++K+ DFGL+ F V ++ + T +Y APEVL ++Y DVWS G I
Sbjct: 140 KSRDALIKIVDFGLSAHFEVGGKM-KERLGTAYYIAPEVL--RKKYDEKCDVWSCGVILY 196
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTF--PEWSNFCLDKHV 150
+ P F G ++ + L R+ + K +F P+W+
Sbjct: 197 ILLCGYPPFGGQTDQEILKRVEK------------------GKFSFDPPDWT-------- 230
Query: 151 KNLDQDGLDLLEKTLIYCPATRINAENALKH----KYFADK-TDLPKFA 194
+ + L++ L Y P+ RI+AE AL H K+ + K TD+ K A
Sbjct: 231 -QVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQKHTDVGKHA 278
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 28/149 (18%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K + ++K+ DFGL+ F V ++ + T +Y APEVL ++Y DVWS G I
Sbjct: 157 KSRDALIKIVDFGLSAHFEVGGKM-KERLGTAYYIAPEVL--RKKYDEKCDVWSCGVILY 213
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
+ P F G ++ + L R+ + + P+W+
Sbjct: 214 ILLCGYPPFGGQTDQEILKRVEK----------------GKFSFDPPDWT---------Q 248
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKH 181
+ + L++ L Y P+ RI+AE AL H
Sbjct: 249 VSDEAKQLVKLMLTYEPSKRISAEEALNH 277
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 36 SNIVKVADFGLARAF---GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
+N VKV DFG+ARA G V + T Y +PE G DV+S+GC+
Sbjct: 152 TNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLY 210
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 129
E+ T +P F GDS + ++ R P G+S
Sbjct: 211 EVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 247
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 36 SNIVKVADFGLARAF---GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
+N VKV DFG+ARA G V + T Y +PE G DV+S+GC+
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLY 210
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 129
E+ T +P F GDS + ++ R P G+S
Sbjct: 211 EVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 247
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 36 SNIVKVADFGLARAF---GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
+N VKV DFG+ARA G V + T Y +PE G DV+S+GC+
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLY 210
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 129
E+ T +P F GDS + ++ R P G+S
Sbjct: 211 EVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 247
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 36 SNIVKVADFGLARAF---GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
+N VKV DFG+ARA G V + T Y +PE G DV+S+GC+
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLY 210
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 129
E+ T +P F GDS + ++ R P G+S
Sbjct: 211 EVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 247
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 36 SNIVKVADFGLARAF---GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
+N VKV DFG+ARA G V + T Y +PE G DV+S+GC+
Sbjct: 169 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLY 227
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 129
E+ T +P F GDS + ++ R P G+S
Sbjct: 228 EVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 264
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 36 SNIVKVADFGLARAF---GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
+N VKV DFG+ARA G V + T Y +PE G DV+S+GC+
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLY 210
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 129
E+ T +P F GDS ++ R P G+S
Sbjct: 211 EVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGLS 247
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL-LGSQRYSCPVD 83
++ + I S ++K++DFG ++ TL Y APE++ G + Y D
Sbjct: 148 IKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAAD 207
Query: 84 VWSIGCIFAEIATRKPLF 101
+WS+GC E+AT KP F
Sbjct: 208 IWSLGCTIIEMATGKPPF 225
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL-LGSQRYSCPVD 83
++ + I S ++K++DFG ++ TL Y APE++ G + Y D
Sbjct: 134 IKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAAD 193
Query: 84 VWSIGCIFAEIATRKPLF 101
+WS+GC E+AT KP F
Sbjct: 194 IWSLGCTIIEMATGKPPF 211
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 26/156 (16%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K K VK+ADFGLA + + T Y +PEVL Y PVD+W+ G I
Sbjct: 139 KSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR-KDPYGKPVDMWACGVILY 197
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
+ P F + + R+++ + D +P P++ T PE
Sbjct: 198 ILLVGYPPFWDEDQ----HRLYQQIKAGAYD-FPS----PEWDTVTPE------------ 236
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
DL+ K L PA RI A ALKH + ++
Sbjct: 237 ----AKDLINKMLTINPAKRITASEALKHPWICQRS 268
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 26/156 (16%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K K VK+ADFGLA + + T Y +PEVL Y PVD+W+ G I
Sbjct: 139 KSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR-KDPYGKPVDMWACGVILY 197
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
+ P F + + R+++ + D +P P++ T PE
Sbjct: 198 ILLVGYPPFWDEDQ----HRLYQQIKAGAYD-FPS----PEWDTVTPE------------ 236
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
DL+ K L PA RI A ALKH + ++
Sbjct: 237 ----AKDLINKMLTINPAKRITASEALKHPWICQRS 268
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 69/169 (40%), Gaps = 33/169 (19%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K S VK+ DFG+A G + V T + APEV+ + Y PVDVW G I
Sbjct: 166 KENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVV-KREPYGKPVDVWGCGVILF 224
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
+ + F G E R+F G+ K YK +WS+
Sbjct: 225 ILLSGCLPFYGTKE-----RLFE-----------GIIK-GKYKMNPRQWSH--------- 258
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKY------FADKTDLPKFAE 195
+ + DL+ + L+ PA RI AL H + +A K LP+ E
Sbjct: 259 ISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVE 307
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 74/182 (40%), Gaps = 30/182 (16%)
Query: 7 LEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWY 66
L Q+G + L A+ K K VK+ADFGLA + + T Y
Sbjct: 117 LHCHQMGVVHRDLKPENLLLAS----KCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGY 172
Query: 67 RAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 126
+PEVL + Y PVD+W+ G I + P F + + ++++ + D +P
Sbjct: 173 LSPEVLR-KEAYGKPVDIWACGVILYILLVGYPPFWDEDQ----HKLYQQIKAGAYD-FP 226
Query: 127 GVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
P++ T PE N L+ + L PA RI A ALKH +
Sbjct: 227 S----PEWDTVTPEAKN----------------LINQMLTINPAKRITAHEALKHPWVCQ 266
Query: 187 KT 188
++
Sbjct: 267 RS 268
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 74/182 (40%), Gaps = 30/182 (16%)
Query: 7 LEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWY 66
L Q+G + L A+ K K VK+ADFGLA + + T Y
Sbjct: 124 LHCHQMGVVHRNLKPENLLLAS----KLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGY 179
Query: 67 RAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 126
+PEVL Y PVD+W+ G I + P F + + R+++ + D +P
Sbjct: 180 LSPEVLR-KDPYGKPVDLWACGVILYILLVGYPPFWDEDQ----HRLYQQIKAGAYD-FP 233
Query: 127 GVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
P++ T PE DL+ K L P+ RI A ALKH + +
Sbjct: 234 S----PEWDTVTPE----------------AKDLINKMLTINPSKRITAAEALKHPWISH 273
Query: 187 KT 188
++
Sbjct: 274 RS 275
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 74/182 (40%), Gaps = 30/182 (16%)
Query: 7 LEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWY 66
L Q+G + L A+ K K VK+ADFGLA + + T Y
Sbjct: 135 LHCHQMGVVHRDLKPENLLLAS----KLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGY 190
Query: 67 RAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 126
+PEVL Y PVD+W+ G I + P F + + R+++ + D +P
Sbjct: 191 LSPEVLR-KDPYGKPVDLWACGVILYILLVGYPPFWDEDQ----HRLYQQIKAGAYD-FP 244
Query: 127 GVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
P++ T PE DL+ K L P+ RI A ALKH + +
Sbjct: 245 S----PEWDTVTPEAK----------------DLINKMLTINPSKRITAAEALKHPWISH 284
Query: 187 KT 188
++
Sbjct: 285 RS 286
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+AD G A + YT+ + T YR+PEVLLG+ + C D+WS C+ E+ T
Sbjct: 177 IKIADLGNACWYD---EHYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGD 232
Query: 99 PLFQGDS 105
LF+ D
Sbjct: 233 FLFEPDE 239
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+AD G A + YT+ + T YR+PEVLLG+ + C D+WS C+ E+ T
Sbjct: 177 IKIADLGNACWYD---EHYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGD 232
Query: 99 PLFQGDS 105
LF+ D
Sbjct: 233 FLFEPDE 239
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
K V++ DFG+AR V + + T +Y +PE+ ++ Y+ D+W++GC+ E+
Sbjct: 160 KDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEIC-ENKPYNNKSDIWALGCVLYEL 218
Query: 95 ATRKPLFQGDSEIDQLFRIF 114
T K F+ S + + +I
Sbjct: 219 CTLKHAFEAGSMKNLVLKII 238
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 26/156 (16%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K K VK+ADFGLA + + T Y +PEVL Y PVD+W+ G I
Sbjct: 166 KCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLR-KDPYGKPVDIWACGVILY 224
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
+ P F + + ++++ + D +P P++ T PE N
Sbjct: 225 ILLVGYPPFWDEDQ----HKLYQQIKAGAYD-FPS----PEWDTVTPEAKN--------- 266
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
L+ + L PA RI A+ ALKH + ++
Sbjct: 267 -------LINQMLTINPAKRITADQALKHPWVCQRS 295
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 64/119 (53%), Gaps = 9/119 (7%)
Query: 10 EQVGTYQVKITTRLFLQ---ATSFCIKPKSNIVKVADFGLARAFGVP--VRIYTHEVVTL 64
+Q+ V + ++ F+ AT C+ ++ +VK+ DFG++R R+ H ++ +
Sbjct: 135 QQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 65 WYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT--RKPLFQ-GDSEIDQLFRIFRVLTTP 120
+ PE ++ ++++ DVWS+G + EI T ++P +Q ++E+ + RVL P
Sbjct: 195 RWMPPESIM-YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRP 252
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 30/150 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFGLA +P + T Y +PE+ S + DVWS+GC+F + +
Sbjct: 151 IKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSA-HGLESDVWSLGCMFYTLLIGR 209
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F D+ + L ++ L DY+ P + L +
Sbjct: 210 PPFDTDTVKNTLNKVV----------------LADYE--MPSF-----------LSIEAK 240
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKT 188
DL+ + L PA R++ + L H + + +
Sbjct: 241 DLIHQLLRRNPADRLSLSSVLDHPFMSRNS 270
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 30/147 (20%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
K +K+ADFG+ + + T Y APE+LLG Q+Y+ VD WS G + E+
Sbjct: 154 KDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLG-QKYNHSVDWWSFGVLLYEM 212
Query: 95 ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
+ F G E ++LF R+ DN +P W L+
Sbjct: 213 LIGQSPFHGQDE-EELFHSIRM------DN-----------PFYPRW-----------LE 243
Query: 155 QDGLDLLEKTLIYCPATRINAENALKH 181
++ DLL K + P R+ ++
Sbjct: 244 KEAKDLLVKLFVREPEKRLGVRGDIRQ 270
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 9/118 (7%)
Query: 11 QVGTYQVKITTRLFLQ---ATSFCIKPKSNIVKVADFGLARAFGVP--VRIYTHEVVTLW 65
Q+ + V + ++ F+ AT C+ + +VK+ DFG++R R+ H ++ +
Sbjct: 141 QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 200
Query: 66 YRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT--RKPLFQ-GDSEIDQLFRIFRVLTTP 120
+ PE ++ ++++ DVWS G I EI T ++P FQ ++E+ + RVL P
Sbjct: 201 WMPPESIM-YRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERP 257
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 30/147 (20%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
K +K+ADFG+ + + T Y APE+LLG Q+Y+ VD WS G + E+
Sbjct: 153 KDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLG-QKYNHSVDWWSFGVLLYEM 211
Query: 95 ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
+ F G E ++LF R+ DN +P W L+
Sbjct: 212 LIGQSPFHGQDE-EELFHSIRM------DN-----------PFYPRW-----------LE 242
Query: 155 QDGLDLLEKTLIYCPATRINAENALKH 181
++ DLL K + P R+ ++
Sbjct: 243 KEAKDLLVKLFVREPEKRLGVRGDIRQ 269
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 68/169 (40%), Gaps = 33/169 (19%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K S VK+ FG+A G + V T + APEV+ + Y PVDVW G I
Sbjct: 166 KENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV-KREPYGKPVDVWGCGVILF 224
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
+ + F G E R+F G+ K YK +WS+
Sbjct: 225 ILLSGCLPFYGTKE-----RLFE-----------GIIK-GKYKMNPRQWSH--------- 258
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKY------FADKTDLPKFAE 195
+ + DL+ + L+ PA RI AL H + +A K LP+ E
Sbjct: 259 ISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVE 307
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 36 SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+ +VK+ D GL R F V T +Y +PE + Y+ D+WS+GC+ E+A
Sbjct: 172 TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE-RIHENGYNFKSDIWSLGCLLYEMA 230
Query: 96 TRKPLFQGD 104
+ F GD
Sbjct: 231 ALQSPFYGD 239
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 68/169 (40%), Gaps = 33/169 (19%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K S VK+ FG+A G + V T + APEV+ + Y PVDVW G I
Sbjct: 168 KENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV-KREPYGKPVDVWGCGVILF 226
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
+ + F G E R+F G+ K YK +WS+
Sbjct: 227 ILLSGCLPFYGTKE-----RLFE-----------GIIK-GKYKMNPRQWSH--------- 260
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKY------FADKTDLPKFAE 195
+ + DL+ + L+ PA RI AL H + +A K LP+ E
Sbjct: 261 ISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVE 309
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 28/154 (18%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK++DFG V V T ++ APEV+ S Y+ VD+WS+G + E+ +
Sbjct: 180 VKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRS-LYATEVDIWSLGIMVIEMVDGE 238
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P + DS + + R+ D+ P KL + P +F
Sbjct: 239 PPYFSDSPVQAMKRL--------RDSPP--PKLKNSHKVSPVLRDF-------------- 274
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
LE+ L+ P R A+ L H + +T LP+
Sbjct: 275 --LERMLVRDPQERATAQELLDHPFLL-QTGLPE 305
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+AD G A + +T ++ T YR+ EVL+G+ YS P D+WS C+ E+AT
Sbjct: 227 VKIADLGNACWVH---KHFTEDIQTRQYRSIEVLIGAG-YSTPADIWSTACMAFELATGD 282
Query: 99 PLFQGDSEID 108
LF+ S D
Sbjct: 283 YLFEPHSGED 292
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+AD G A + +T ++ T YR+ EVL+GS Y+ P D+WS C+ E+AT
Sbjct: 235 VKIADLGNACWVH---KHFTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGD 290
Query: 99 PLFQGDS 105
LF+ S
Sbjct: 291 YLFEPHS 297
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+AD G A + +T ++ T YR+ EVL+GS Y+ P D+WS C+ E+AT
Sbjct: 219 VKIADLGNACWVH---KHFTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGD 274
Query: 99 PLFQGDS 105
LF+ S
Sbjct: 275 YLFEPHS 281
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 15 YQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL 72
+ + IT R ++ + + + N+ K++DFGLA F R+ TL Y APE+L
Sbjct: 121 HGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
+ ++ PVDVWS G + + G+ DQ D+ S
Sbjct: 179 KRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSDSXQEYSDWK 221
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ KT W K +D L LL K L+ P+ RI + K +++
Sbjct: 222 EKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 27/157 (17%)
Query: 30 FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
C+ + +K+ DFGLAR + P T + APEV+ S P D+WS+G
Sbjct: 219 LCVNRDAKQIKIIDFGLARRYK-PREKLKVNFGTPEFLAPEVV-NYDFVSFPTDMWSVGV 276
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH 149
I + + F GD++ + L I W D+
Sbjct: 277 IAYMLLSGLSPFLGDNDAETLNNILAC-----------------------RWD--LEDEE 311
Query: 150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
+++ ++ + + K LI + RI+A ALKH + +D
Sbjct: 312 FQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSD 348
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6 QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
QL V + + IT R ++ + + + N+ K++DFGLA F R+ T
Sbjct: 112 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMXGT 169
Query: 64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
L Y APE+L + ++ PVDVWS G + + G+ DQ D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 212
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
+ S + KT W K +D L LL K L+ P+ RI + K ++
Sbjct: 213 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
Query: 184 F 184
+
Sbjct: 264 Y 264
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 15 YQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL 72
+ + IT R ++ + + + N+ K++DFGLA F R+ TL Y APE+L
Sbjct: 122 HGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 179
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
+ ++ PVDVWS G + + G+ DQ D+ S
Sbjct: 180 KRREFHAEPVDVWSCGIVLTA------MLAGELPWDQ-----------PSDSCQEYSDWK 222
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ KT W K +D L LL K L+ P+ RI + K +++
Sbjct: 223 EKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6 QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
QL V + + IT R ++ + + + N+ K++DFGLA F R+ T
Sbjct: 113 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 170
Query: 64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
L Y APE+L + ++ PVDVWS G + + G+ DQ D
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 213
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
+ S + KT W K +D L LL K L+ P+ RI + K ++
Sbjct: 214 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
Query: 184 F 184
+
Sbjct: 265 Y 265
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6 QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
QL V + + IT R ++ + + + N+ K++DFGLA F R+ T
Sbjct: 112 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMXGT 169
Query: 64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
L Y APE+L + ++ PVDVWS G + + G+ DQ D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 212
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
+ S + KT W K +D L LL K L+ P+ RI + K ++
Sbjct: 213 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
Query: 184 F 184
+
Sbjct: 264 Y 264
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6 QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
QL V + + IT R ++ + + + N+ K++DFGLA F R+ T
Sbjct: 112 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 169
Query: 64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
L Y APE+L + ++ PVDVWS G + + G+ DQ D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 212
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
+ S + KT W K +D L LL K L+ P+ RI + K ++
Sbjct: 213 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
Query: 184 F 184
+
Sbjct: 264 Y 264
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6 QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
QL V + + IT R ++ + + + N+ K++DFGLA F R+ T
Sbjct: 112 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 169
Query: 64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
L Y APE+L + ++ PVDVWS G + + G+ DQ D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 212
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
+ S + KT W K +D L LL K L+ P+ RI + K ++
Sbjct: 213 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
Query: 184 F 184
+
Sbjct: 264 Y 264
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6 QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
QL V + + IT R ++ + + + N+ K++DFGLA F R+ T
Sbjct: 113 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 170
Query: 64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
L Y APE+L + ++ PVDVWS G + + G+ DQ D
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 213
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
+ S + KT W K +D L LL K L+ P+ RI + K ++
Sbjct: 214 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
Query: 184 F 184
+
Sbjct: 265 Y 265
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6 QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
QL V + + IT R ++ + + + N+ K++DFGLA F R+ T
Sbjct: 113 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 170
Query: 64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
L Y APE+L + ++ PVDVWS G + + G+ DQ D
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 213
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
+ S + KT W K +D L LL K L+ P+ RI + K ++
Sbjct: 214 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
Query: 184 F 184
+
Sbjct: 265 Y 265
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6 QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
QL V + + IT R ++ + + + N+ K++DFGLA F R+ T
Sbjct: 112 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 169
Query: 64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
L Y APE+L + ++ PVDVWS G + + G+ DQ D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 212
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
+ S + KT W K +D L LL K L+ P+ RI + K ++
Sbjct: 213 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
Query: 184 F 184
+
Sbjct: 264 Y 264
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 42/206 (20%)
Query: 13 GTYQVKITTRLFLQATS---FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAP 69
GT+ KI F+Q+ + C + K +I +A G P +RAP
Sbjct: 167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTP-----------GFRAP 215
Query: 70 EVLLGSQRYSCPVDVWSIGCIFAEI-ATRKPLFQGDSEIDQLFRIFRVLTT--------- 119
EVL + +D+WS G IF + + R P ++ ++ L +I + +
Sbjct: 216 EVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKT 275
Query: 120 -----------PTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD------QDGLDLLE 162
P +D +L ++ P+ ++ + H NL+ + DLL+
Sbjct: 276 FGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSD-IQGHATNLEGWNEVPDEAYDLLD 334
Query: 163 KTLIYCPATRINAENALKHKYFADKT 188
K L PA+RI AE AL H +F D +
Sbjct: 335 KLLDLNPASRITAEEALLHPFFKDMS 360
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6 QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
QL V + + IT R ++ + + + N+ K++DFGLA F R+ T
Sbjct: 112 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 169
Query: 64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
L Y APE+L + ++ PVDVWS G + + G+ DQ D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 212
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
+ S + KT W K +D L LL K L+ P+ RI + K ++
Sbjct: 213 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
Query: 184 F 184
+
Sbjct: 264 Y 264
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 15 YQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL 72
+ + IT R ++ + + + N+ K++DFGLA F R+ TL Y APE+L
Sbjct: 121 HGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
+ ++ PVDVWS G + + G+ DQ D+ S
Sbjct: 179 KRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSDSCQEYSDWK 221
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ KT W K +D L LL K L+ P+ RI + K +++
Sbjct: 222 EKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6 QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
QL V + + IT R ++ + + + N+ K++DFGLA F R+ T
Sbjct: 112 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 169
Query: 64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
L Y APE+L + ++ PVDVWS G + + G+ DQ D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 212
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
+ S + KT W K +D L LL K L+ P+ RI + K ++
Sbjct: 213 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
Query: 184 F 184
+
Sbjct: 264 Y 264
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6 QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
QL V + + IT R ++ + + + N+ K++DFGLA F R+ T
Sbjct: 112 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 169
Query: 64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
L Y APE+L + ++ PVDVWS G + + G+ DQ D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 212
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
+ S + KT W K +D L LL K L+ P+ RI + K ++
Sbjct: 213 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
Query: 184 F 184
+
Sbjct: 264 Y 264
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6 QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
QL V + + IT R ++ + + + N+ K++DFGLA F R+ T
Sbjct: 112 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 169
Query: 64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
L Y APE+L + ++ PVDVWS G + + G+ DQ D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 212
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
+ S + KT W K +D L LL K L+ P+ RI + K ++
Sbjct: 213 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
Query: 184 F 184
+
Sbjct: 264 Y 264
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6 QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
QL V + + IT R ++ + + + N+ K++DFGLA F R+ T
Sbjct: 111 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 168
Query: 64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
L Y APE+L + ++ PVDVWS G + + G+ DQ D
Sbjct: 169 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 211
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
+ S + KT W K +D L LL K L+ P+ RI + K ++
Sbjct: 212 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 262
Query: 184 F 184
+
Sbjct: 263 Y 263
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 15 YQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL 72
+ + IT R ++ + + + N+ K++DFGLA F R+ TL Y APE+L
Sbjct: 122 HGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
+ ++ PVDVWS G + + G+ DQ D+ S
Sbjct: 180 KRREFHAEPVDVWSCGIVLTA------MLAGELPWDQ-----------PSDSCQEYSDWK 222
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ KT W K +D L LL K L+ P+ RI + K +++
Sbjct: 223 EKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 15 YQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL 72
+ + IT R ++ + + + N+ K++DFGLA F R+ TL Y APE+L
Sbjct: 122 HGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
+ ++ PVDVWS G + + G+ DQ D+ S
Sbjct: 180 KRREFHAEPVDVWSCGIVLTA------MLAGELPWDQ-----------PSDSCQEYSDWK 222
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ KT W K +D L LL K L+ P+ RI + K +++
Sbjct: 223 EKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 15 YQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL 72
+ + IT R ++ + + + N+ K++DFGLA F R+ TL Y APE+L
Sbjct: 122 HGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
+ ++ PVDVWS G + + G+ DQ D+ S
Sbjct: 180 KRREFHAEPVDVWSCGIVLTA------MLAGELPWDQ-----------PSDSCQEYSDWK 222
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ KT W K +D L LL K L+ P+ RI + K +++
Sbjct: 223 EKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 69/169 (40%), Gaps = 21/169 (12%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
+ KS +K+ DFG A + + T YRAPEV+L + + D+WS GC+ A
Sbjct: 195 RTKSTGIKLIDFGCAT---FKSDYHGSIINTRQYRAPEVIL-NLGWDVSSDMWSFGCVLA 250
Query: 93 EIATRKPLFQGDSEIDQLFRIFRV--------LTTPTEDNWPGVSKLPDYKTTFPE-WSN 143
E+ T LF+ ++ L + + L T+ N + K +PE S+
Sbjct: 251 ELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASS 310
Query: 144 FCLDKHVKNL--------DQDGLDLLEKTLIYCPATRINAENALKHKYF 184
KHVK + D L L P R + LKHK+
Sbjct: 311 INSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 33/148 (22%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL--LGSQRYSCPVDVWSIGCIFAEIAT 96
K+ADFG+A + + T ++ APEV+ +G Y+C D+WS+G E+A
Sbjct: 164 AKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIG---YNCVADIWSLGITAIEMAE 220
Query: 97 RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS-NFCLDKHVKNLDQ 155
KP + ++I + IF + T P P + P+ WS NF
Sbjct: 221 GKPPY---ADIHPMRAIFMIPTNP-----PPTFRKPEL------WSDNFT---------- 256
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKY 183
D +++ L+ P R A L+H +
Sbjct: 257 ---DFVKQCLVKSPEQRATATQLLQHPF 281
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 15 YQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL 72
+ + IT R ++ + + + N+ K++DFGLA F R+ TL Y APE+L
Sbjct: 122 HGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
+ ++ PVDVWS G + + G+ DQ D+ S
Sbjct: 180 KRREFHAEPVDVWSCGIVLTA------MLAGELPWDQ-----------PSDSCQEYSDWK 222
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ KT W K +D L LL K L+ P+ RI + K +++
Sbjct: 223 EKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL--GSQRYSCPVDVWSIGCIFAEIA 95
++K+ DFG ++ G + T T Y APEVL+ G+ Y+ VD WS+G I
Sbjct: 294 LIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 352
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
+ P F SE + +T+ + P V W+ + +
Sbjct: 353 SGYPPF---SEHRTQVSLKDQITSGKYNFIPEV------------WA---------EVSE 388
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE 195
LDL++K L+ P R E AL+H + D+ KF +
Sbjct: 389 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD 428
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 15 YQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL 72
+ + IT R ++ + + + N+ K++DFGLA F R+ TL Y APE+L
Sbjct: 121 HGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
+ ++ PVDVWS G + + G+ DQ D+ S
Sbjct: 179 KRREFHAEPVDVWSCGIVLTA------MLAGELPWDQ-----------PSDSCQEYSDWK 221
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ KT W K +D L LL K L+ P+ RI + K +++
Sbjct: 222 EKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL--GSQRYSCPVDVWSIGCIFAEIA 95
++K+ DFG ++ G + T T Y APEVL+ G+ Y+ VD WS+G I
Sbjct: 280 LIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 338
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
+ P F SE + +T+ + P V W+ + +
Sbjct: 339 SGYPPF---SEHRTQVSLKDQITSGKYNFIPEV------------WA---------EVSE 374
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE 195
LDL++K L+ P R E AL+H + D+ KF +
Sbjct: 375 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD 414
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL--GSQRYSCPVDVWSIGCIFAEIA 95
++K+ DFG ++ G + T T Y APEVL+ G+ Y+ VD WS+G I
Sbjct: 154 LIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 212
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
+ P F SE + +T+ + P V W+ + +
Sbjct: 213 SGYPPF---SEHRTQVSLKDQITSGKYNFIPEV------------WA---------EVSE 248
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE 195
LDL++K L+ P R E AL+H + D+ KF +
Sbjct: 249 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD 288
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL--GSQRYSCPVDVWSIGCIFAEIA 95
++K+ DFG ++ G + T T Y APEVL+ G+ Y+ VD WS+G I
Sbjct: 155 LIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 213
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
+ P F SE + +T+ + P V W+ + +
Sbjct: 214 SGYPPF---SEHRTQVSLKDQITSGKYNFIPEV------------WA---------EVSE 249
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE 195
LDL++K L+ P R E AL+H + D+ KF +
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD 289
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL--GSQRYSCPVDVWSIGCIFAEIA 95
++K+ DFG ++ G + T T Y APEVL+ G+ Y+ VD WS+G I
Sbjct: 161 LIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 219
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
+ P F SE + +T+ + P V W+ + +
Sbjct: 220 SGYPPF---SEHRTQVSLKDQITSGKYNFIPEV------------WA---------EVSE 255
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE 195
LDL++K L+ P R E AL+H + D+ KF +
Sbjct: 256 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD 295
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL--GSQRYSCPVDVWSIGCIFAEIA 95
++K+ DFG ++ G + T T Y APEVL+ G+ Y+ VD WS+G I
Sbjct: 155 LIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 213
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
+ P F SE + +T+ + P V W+ + +
Sbjct: 214 SGYPPF---SEHRTQVSLKDQITSGKYNFIPEV------------WA---------EVSE 249
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE 195
LDL++K L+ P R E AL+H + D+ KF +
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD 289
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL--GSQRYSCPVDVWSIGCIFAEIA 95
++K+ DFG ++ G + T T Y APEVL+ G+ Y+ VD WS+G I
Sbjct: 155 LIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 213
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
+ P F SE + +T+ + P V W+ + +
Sbjct: 214 SGYPPF---SEHRTQVSLKDQITSGKYNFIPEV------------WA---------EVSE 249
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE 195
LDL++K L+ P R E AL+H + D+ KF +
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD 289
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 37 NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG--SQRYSCPVDVWSIGCIFAEI 94
+VK+ DFG A + P + V T ++ APEV+L +Y VDVWS+G E+
Sbjct: 191 GLVKLGDFGSA-SIMAPANXF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
Query: 95 ATRKPLFQGDSEIDQLFRI 113
A RKP + + L+ I
Sbjct: 247 AERKPPLFNMNAMSALYHI 265
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 37 NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG--SQRYSCPVDVWSIGCIFAEI 94
+VK+ DFG A + P + V T ++ APEV+L +Y VDVWS+G E+
Sbjct: 152 GLVKLGDFGSA-SIMAPANXF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
Query: 95 ATRKPLFQGDSEIDQLFRI 113
A RKP + + L+ I
Sbjct: 208 AERKPPLFNMNAMSALYHI 226
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 29/150 (19%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ADFG+A V T ++ APEV+ S Y D+WS+G E+A +
Sbjct: 159 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSA-YDSKADIWSLGITAIELAKGE 217
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P +S++ + RVL ++N P + + D+ +F E+ + CL+K
Sbjct: 218 P---PNSDMHPM----RVLFLIPKNNPPTL--VGDFTKSFKEFIDACLNKD--------- 259
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKT 188
P+ R A+ LKHK+ +
Sbjct: 260 ----------PSFRPTAKELLKHKFIVKNS 279
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 61/157 (38%), Gaps = 29/157 (18%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI-FAEIATR 97
+++ DFG A+ + T + APEVL Q Y D+WS+G + + +A
Sbjct: 164 LRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL-KRQGYDEGCDIWSLGILLYTMLAGY 222
Query: 98 KPLFQGDSEIDQ--LFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
P G S+ + L RI T + NW VS +
Sbjct: 223 TPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVS-------------------------E 257
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
DL+ K L P R+ A+ L+H + K LP+
Sbjct: 258 TAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQ 294
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 61/157 (38%), Gaps = 29/157 (18%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI-FAEIATR 97
+++ DFG A+ + T + APEVL Q Y D+WS+G + + +A
Sbjct: 164 LRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL-KRQGYDEGCDIWSLGILLYTMLAGY 222
Query: 98 KPLFQGDSEIDQ--LFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
P G S+ + L RI T + NW VS +
Sbjct: 223 TPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVS-------------------------E 257
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
DL+ K L P R+ A+ L+H + K LP+
Sbjct: 258 TAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQ 294
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ DFGLA T Y APEVL + +S VDVWSIGCI + K
Sbjct: 156 VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGK 214
Query: 99 PLFQGDSEIDQLFRI 113
P F+ + RI
Sbjct: 215 PPFETSCLKETYLRI 229
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ DFGLA T Y APEVL + +S VDVWSIGCI + K
Sbjct: 156 VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGK 214
Query: 99 PLFQGDSEIDQLFRI 113
P F+ + RI
Sbjct: 215 PPFETSCLKETYLRI 229
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ DFGLA T Y APEVL + +S VDVWSIGCI + K
Sbjct: 160 VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGK 218
Query: 99 PLFQGDSEIDQLFRI 113
P F+ + RI
Sbjct: 219 PPFETSCLKETYLRI 233
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
L+ + + K N VK+ DFGLAR V T +Y +PE + Y+ D+
Sbjct: 142 LKPANVFLDGKQN-VKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM-NRMSYNEKSDI 199
Query: 85 WSIGCIFAEIATRKPLFQGDSE 106
WS+GC+ E+ P F S+
Sbjct: 200 WSLGCLLYELCALMPPFTAFSQ 221
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 18/123 (14%)
Query: 32 IKPKSNIV------KVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDV 84
IKP++ ++ K+ DFG+A+A T+ V+ T+ Y +PE G C D+
Sbjct: 137 IKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDEC-TDI 195
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE-WSN 143
+SIG + E+ +P F G++ + + +D+ P V+ D + P+ SN
Sbjct: 196 YSIGIVLYEMLVGEPPFNGETAV-------SIAIKHIQDSVPNVT--TDVRKDIPQSLSN 246
Query: 144 FCL 146
L
Sbjct: 247 VIL 249
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
L+ + + K N VK+ DFGLAR V T +Y +PE + Y+ D+
Sbjct: 142 LKPANVFLDGKQN-VKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM-NRMSYNEKSDI 199
Query: 85 WSIGCIFAEIATRKPLFQGDSE 106
WS+GC+ E+ P F S+
Sbjct: 200 WSLGCLLYELCALMPPFTAFSQ 221
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 31/160 (19%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
L+A + + NI K+ADFG + F ++ T + Y APE+ G + VDV
Sbjct: 132 LKAENLLLDADMNI-KIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGPEVDV 189
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
WS+G I + + F G + + R+ R G ++P Y +T
Sbjct: 190 WSLGVILYTLVSGSLPFDGQNLKELRERVLR-----------GKYRIPFYMST------- 231
Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
D +LL+K LI P+ R E +K ++
Sbjct: 232 -----------DCENLLKKFLILNPSKRGTLEQIMKDRWM 260
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 31/160 (19%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
L+A + + NI K+ADFG + F ++ T + Y APE+ G + VDV
Sbjct: 139 LKAENLLLDADMNI-KIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGPEVDV 196
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
WS+G I + + F G + + R+ R G ++P Y +T
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKELRERVLR-----------GKYRIPFYMST------- 238
Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
D +LL+K LI P+ R E +K ++
Sbjct: 239 -----------DCENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ DFGLA T Y APEVL + +S VDVWSIGCI + K
Sbjct: 178 VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGK 236
Query: 99 PLFQGDSEIDQLFRI 113
P F+ + RI
Sbjct: 237 PPFETSCLKETYLRI 251
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 31/160 (19%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
L+A + + NI K+ADFG + F ++ T + Y APE+ G + VDV
Sbjct: 139 LKAENLLLDADMNI-KIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGPEVDV 196
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
WS+G I + + F G + + R+ R G ++P Y +T
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKELRERVLR-----------GKYRIPFYMST------- 238
Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
D +LL+K LI P+ R E +K ++
Sbjct: 239 -----------DCENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
L+ + + K N VK+ DFGLAR V T +Y +PE + Y+ D+
Sbjct: 142 LKPANVFLDGKQN-VKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQM-NRMSYNEKSDI 199
Query: 85 WSIGCIFAEIATRKPLFQGDSE 106
WS+GC+ E+ P F S+
Sbjct: 200 WSLGCLLYELCALMPPFTAFSQ 221
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 31/160 (19%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
L+A + + NI K+ADFG + F ++ T + Y APE+ G + VDV
Sbjct: 139 LKAENLLLDADMNI-KIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGPEVDV 196
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
WS+G I + + F G + + R+ R G ++P Y +T
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKELRERVLR-----------GKYRIPFYMST------- 238
Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
D +LL+K LI P+ R E +K ++
Sbjct: 239 -----------DCENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 194
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 195 AFGVLLWEIAT 205
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 197
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 198 AFGVLLWEIAT 208
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ DFGLA T Y APEVL + +S VDVWSIGCI + K
Sbjct: 180 VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGK 238
Query: 99 PLFQGDSEIDQLFRI 113
P F+ + RI
Sbjct: 239 PPFETSCLKETYLRI 253
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 151 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 209
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 210 AFGVLLWEIAT 220
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 201
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 202 AFGVLLWEIAT 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 198
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 199 AFGVLLWEIAT 209
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ DFGLA T Y APEVL + +S VDVWSIGCI + K
Sbjct: 154 VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGK 212
Query: 99 PLFQGDSEIDQLFRI 113
P F+ + RI
Sbjct: 213 PPFETSCLKETYLRI 227
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 194
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 195 AFGVLLWEIAT 205
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 198
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 199 AFGVLLWEIAT 209
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 196
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 197 AFGVLLWEIAT 207
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 201
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 202 AFGVLLWEIAT 212
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 201
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 202 AFGVLLWEIAT 212
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 194
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 195 AFGVLLWEIAT 205
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 201
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 202 AFGVLLWEIAT 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 142 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 200
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 201 AFGVLLWEIAT 211
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 196
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 197 AFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 196
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 197 AFGVLLWEIAT 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 196
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 197 AFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 196
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 197 AFGVLLWEIAT 207
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 342 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 400
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 401 AFGVLLWEIAT 411
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 196
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 197 AFGVLLWEIAT 207
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 26/170 (15%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYS-CPVDVWSIG-CIFA 92
K+ VK++DFG + + V +I T + PE Y+ VD+WS+G C++
Sbjct: 187 KNGRVKLSDFGESE-YMVDKKIKGSRG-TYEFMPPEFFSNESSYNGAKVDIWSLGICLYV 244
Query: 93 EIATRKPLFQGDSEIDQLFRIFRV--LTTPTEDN---WPGVSKLPDYKTTFPEWSNFCLD 147
P F + +LF R + P + N +P L + K+T C +
Sbjct: 245 MFYNVVP-FSLKISLVELFNNIRTKNIEYPLDRNHFLYP----LTNKKST-------CSN 292
Query: 148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT--DLPKFAE 195
+ N D D L L L PA RI +E+ALKH++ AD DL +F++
Sbjct: 293 NFLSNEDIDFLKLF---LRKNPAERITSEDALKHEWLADTNIEDLREFSK 339
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 201
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 202 AFGVLLWEIAT 212
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 34/171 (19%)
Query: 15 YQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG 74
+Q +I R L+A + + NI K+ADFG + F V ++ T + Y APE+ G
Sbjct: 128 HQKRIVHR-DLKAENLLLDADMNI-KIADFGFSNEFTVGGKLDTF-CGSPPYAAPELFQG 184
Query: 75 SQRYSCP-VDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 133
++Y P VDVWS+G I + + F G + + R+ R G ++P
Sbjct: 185 -KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR-----------GKYRIPF 232
Query: 134 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
Y +T D +LL++ L+ P R E +K ++
Sbjct: 233 YMST------------------DCENLLKRFLVLNPIKRGTLEQIMKDRWI 265
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 27/147 (18%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK++DFG V V T ++ APE L+ Y VD+WS+G + E+ +
Sbjct: 166 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGE 224
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P + + + + I DN P +L + P F
Sbjct: 225 PPYFNEPPLKAMKMI--------RDNLP--PRLKNLHKVSPSLKGF-------------- 260
Query: 159 DLLEKTLIYCPATRINAENALKHKYFA 185
L++ L+ PA R A LKH + A
Sbjct: 261 --LDRLLVRDPAQRATAAELLKHPFLA 285
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 27/147 (18%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK++DFG V V T ++ APE L+ Y VD+WS+G + E+ +
Sbjct: 164 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGE 222
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P + + + + I DN P +L + P F
Sbjct: 223 PPYFNEPPLKAMKMI--------RDNLP--PRLKNLHKVSPSLKGF-------------- 258
Query: 159 DLLEKTLIYCPATRINAENALKHKYFA 185
L++ L+ PA R A LKH + A
Sbjct: 259 --LDRLLVRDPAQRATAAELLKHPFLA 283
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 345 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 403
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 404 AFGVLLWEIAT 414
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L ++S DVW
Sbjct: 384 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 442
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 443 AFGVLLWEIAT 453
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 27/147 (18%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK++DFG V V T ++ APE L+ Y VD+WS+G + E+ +
Sbjct: 155 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGE 213
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P + + + + I DN P +L + P F
Sbjct: 214 PPYFNEPPLKAMKMI--------RDNLP--PRLKNLHKVSPSLKGF-------------- 249
Query: 159 DLLEKTLIYCPATRINAENALKHKYFA 185
L++ L+ PA R A LKH + A
Sbjct: 250 --LDRLLVRDPAQRATAAELLKHPFLA 274
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 27/147 (18%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK++DFG V V T ++ APE L+ Y VD+WS+G + E+ +
Sbjct: 209 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGE 267
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P + + + + I DN P +L + P F
Sbjct: 268 PPYFNEPPLKAMKMI--------RDNLP--PRLKNLHKVSPSLKGF-------------- 303
Query: 159 DLLEKTLIYCPATRINAENALKHKYFA 185
L++ L+ PA R A LKH + A
Sbjct: 304 --LDRLLVRDPAQRATAAELLKHPFLA 328
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 27/147 (18%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK++DFG V V T ++ APE L+ Y VD+WS+G + E+ +
Sbjct: 159 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGE 217
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P + + + + I DN P +L + P F
Sbjct: 218 PPYFNEPPLKAMKMI--------RDNLP--PRLKNLHKVSPSLKGF-------------- 253
Query: 159 DLLEKTLIYCPATRINAENALKHKYFA 185
L++ L+ PA R A LKH + A
Sbjct: 254 --LDRLLVRDPAQRATAAELLKHPFLA 278
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 27/147 (18%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK++DFG V V T ++ APE L+ Y VD+WS+G + E+ +
Sbjct: 286 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGE 344
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P + + + + I DN P +L + P F
Sbjct: 345 PPYFNEPPLKAMKMI--------RDNLP--PRLKNLHKVSPSLKGF-------------- 380
Query: 159 DLLEKTLIYCPATRINAENALKHKYFA 185
L++ L+ PA R A LKH + A
Sbjct: 381 --LDRLLVRDPAQRATAAELLKHPFLA 405
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ DFGLA T Y APEVL + +S VD+WS+GCI + K
Sbjct: 165 VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGK 223
Query: 99 PLFQ 102
P F+
Sbjct: 224 PPFE 227
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 29/147 (19%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
+K+ DFG++R G + E++ T Y APE+L + D+W+IG I + T
Sbjct: 173 IKIVDFGMSRKIGHACEL--REIMGTPEYLAPEIL-NYDPITTATDMWNIGIIAYMLLTH 229
Query: 98 KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
F G+ + I +V +E+ + VS+L
Sbjct: 230 TSPFVGEDNQETYLNISQVNVDYSEETFSSVSQL-------------------------A 264
Query: 158 LDLLEKTLIYCPATRINAENALKHKYF 184
D ++ L+ P R AE L H +
Sbjct: 265 TDFIQSLLVKNPEKRPTAEICLSHSWL 291
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 27 ATSFCIKPKSNIVKVADFGLAR--AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
A C+ + N++K++DFG++R A GV V + + APE L RYS DV
Sbjct: 240 AARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEAL-NYGRYSSESDV 298
Query: 85 WSIGCIFAE 93
WS G + E
Sbjct: 299 WSFGILLWE 307
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
L+A + + NI K+ADFG + F V ++ T + Y APE+ G + VDV
Sbjct: 140 LKAENLLLDGDMNI-KIADFGFSNEFTVGNKLDTF-CGSPPYAAPELFQGKKYDGPEVDV 197
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFR 115
WS+G I + + F G + + R+ R
Sbjct: 198 WSLGVILYTLVSGSLPFDGQNLKELRERVLR 228
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 40/157 (25%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVV------TLWYRAPEVLLGSQRYSCPVDVWSIGCI-F 91
+K+ADFGL++ I H+V+ T Y APE+L G Y VD+WS+G I +
Sbjct: 190 LKIADFGLSK-------IVEHQVLMKTVCGTPGYCAPEILRGCA-YGPEVDMWSVGIITY 241
Query: 92 AEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK 151
+ +P + D DQ F R+L +Y P W L+
Sbjct: 242 ILLCGFEPFY--DERGDQ-FMFRRILNC-------------EYYFISPWWDEVSLNAK-- 283
Query: 152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
DL+ K ++ P R+ AL+H + K
Sbjct: 284 -------DLVRKLIVLDPKKRLTTFQALQHPWVTGKA 313
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ DFGLA T Y APEVL + +S VD+WS+GCI + K
Sbjct: 181 VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGK 239
Query: 99 PLFQGDSEIDQLFRI 113
P F+ + RI
Sbjct: 240 PPFETSCLKETYIRI 254
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ DFGLA T Y APEVL + +S VD+WS+GCI + K
Sbjct: 181 VKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGK 239
Query: 99 PLFQGDSEIDQLFRI 113
P F+ + RI
Sbjct: 240 PPFETSCLKETYIRI 254
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 32/138 (23%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
VK+ DFGL + + TH T+ Y APE+L+ S ++ VD WS+G + ++ T
Sbjct: 160 VKLTDFGLCKE-SIHDGTVTHXFCGTIEYMAPEILMRSG-HNRAVDWWSLGALMYDMLTG 217
Query: 98 KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
P F G++ + +I + LP Y L Q+
Sbjct: 218 APPFTGENRKKTIDKILKCKLN-----------LPPY------------------LTQEA 248
Query: 158 LDLLEKTLIYCPATRINA 175
DLL+K L A+R+ A
Sbjct: 249 RDLLKKLLKRNAASRLGA 266
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + + APE L +S DVW
Sbjct: 157 AARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNTFSIKSDVW 215
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 216 AFGVLLWEIAT 226
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 32/138 (23%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
VK+ DFGL + + TH T+ Y APE+L+ S ++ VD WS+G + ++ T
Sbjct: 160 VKLTDFGLCKE-SIHDGTVTHTFCGTIEYMAPEILMRSG-HNRAVDWWSLGALMYDMLTG 217
Query: 98 KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
P F G++ + +I + LP Y L Q+
Sbjct: 218 APPFTGENRKKTIDKILKCKLN-----------LPPY------------------LTQEA 248
Query: 158 LDLLEKTLIYCPATRINA 175
DLL+K L A+R+ A
Sbjct: 249 RDLLKKLLKRNAASRLGA 266
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ DFGLA T Y APEVL + +S VD+WS+GCI + K
Sbjct: 181 VKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGK 239
Query: 99 PLFQGDSEIDQLFRI 113
P F+ + RI
Sbjct: 240 PPFETSCLKETYIRI 254
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 31/160 (19%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
L+A + + NI K+ADFG + F ++ + Y APE+ G + VDV
Sbjct: 139 LKAENLLLDADMNI-KIADFGFSNEFTFGNKL-DEFCGSPPYAAPELFQGKKYDGPEVDV 196
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
WS+G I + + F G + + R+ R G ++P Y +T
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKELRERVLR-----------GKYRIPFYMST------- 238
Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
D +LL+K LI P+ R E +K ++
Sbjct: 239 -----------DCENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P T TL Y PE++ G + + VD+WS+G + E K
Sbjct: 147 LKIADFGWS--VHAPSSRRTELCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 203
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 204 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 234
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 235 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 60/154 (38%), Gaps = 27/154 (17%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+ ++DFGL++ P + + T Y APEVL + YS VD WSIG I +
Sbjct: 158 IMISDFGLSK-MEDPGSVLSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F +++ +I + +Y+ P W ++
Sbjct: 216 PPFYDENDAKLFEQILKA----------------EYEFDSPYWD---------DISDSAK 250
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
D + + P R E AL+H + A T L K
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDK 284
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 60/154 (38%), Gaps = 27/154 (17%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+ ++DFGL++ P + + T Y APEVL + YS VD WSIG I +
Sbjct: 158 IMISDFGLSK-MEDPGSVLSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F +++ +I + +Y+ P W ++
Sbjct: 216 PPFYDENDAKLFEQILKA----------------EYEFDSPYWD---------DISDSAK 250
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
D + + P R E AL+H + A T L K
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDK 284
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 27 ATSFCIKPKSNIVKVADFGLAR--AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
A C+ + N++K++DFG++R A GV V + + APE L RYS DV
Sbjct: 240 AARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEAL-NYGRYSSESDV 298
Query: 85 WSIGCIFAE 93
WS G + E
Sbjct: 299 WSFGILLWE 307
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 39 VKVADFGLARAF---GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ADFG+ + GV R + T Y APE++ Q Y VD W+ G + E+
Sbjct: 159 IKIADFGMCKEHMMDGVTTREFCG---TPDYIAPEII-AYQPYGKSVDWWAYGVLLYEML 214
Query: 96 TRKPLFQGDSEIDQLFR 112
+P F G+ E D+LF+
Sbjct: 215 AGQPPFDGEDE-DELFQ 230
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 60/154 (38%), Gaps = 27/154 (17%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+ ++DFGL++ P + + T Y APEVL + YS VD WSIG I +
Sbjct: 158 IMISDFGLSK-MEDPGSVLSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F +++ +I + +Y+ P W ++
Sbjct: 216 PPFYDENDAKLFEQILKA----------------EYEFDSPYWD---------DISDSAK 250
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
D + + P R E AL+H + A T L K
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDK 284
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 62/155 (40%), Gaps = 32/155 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ADFGL+ + T + Y APEV+ G VDVWS G I + R+
Sbjct: 151 VKIADFGLSNIMTDGNFLKT-SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 209
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
F D I LF+ + GV LP + L
Sbjct: 210 LPFD-DESIPVLFK----------NISNGVYTLPKF------------------LSPGAA 240
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLPKF 193
L+++ LI P RI+ ++ +F K DLP++
Sbjct: 241 GLIKRMLIVNPLNRISIHEIMQDDWF--KVDLPEY 273
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 62/155 (40%), Gaps = 32/155 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ADFGL+ + T + Y APEV+ G VDVWS G I + R+
Sbjct: 146 VKIADFGLSNIMTDGNFLKT-SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 204
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
F D I LF+ + GV LP + L
Sbjct: 205 LPFD-DESIPVLFK----------NISNGVYTLPKF------------------LSPGAA 235
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLPKF 193
L+++ LI P RI+ ++ +F K DLP++
Sbjct: 236 GLIKRMLIVNPLNRISIHEIMQDDWF--KVDLPEY 268
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 62/155 (40%), Gaps = 32/155 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ADFGL+ + T + Y APEV+ G VDVWS G I + R+
Sbjct: 152 VKIADFGLSNIMTDGNFLKT-SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 210
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
F D I LF+ + GV LP + L
Sbjct: 211 LPFD-DESIPVLFK----------NISNGVYTLPKF------------------LSPGAA 241
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLPKF 193
L+++ LI P RI+ ++ +F K DLP++
Sbjct: 242 GLIKRMLIVNPLNRISIHEIMQDDWF--KVDLPEY 274
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 62/155 (40%), Gaps = 32/155 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ADFGL+ + T + Y APEV+ G VDVWS G I + R+
Sbjct: 142 VKIADFGLSNIMTDGNFLKT-SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 200
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
F D I LF+ + GV LP + L
Sbjct: 201 LPFD-DESIPVLFK----------NISNGVYTLPKF------------------LSPGAA 231
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLPKF 193
L+++ LI P RI+ ++ +F K DLP++
Sbjct: 232 GLIKRMLIVNPLNRISIHEIMQDDWF--KVDLPEY 264
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL----GSQRYSCPVDVWSIGCIFAEI 94
+K+ADFG++ ++ + T ++ APEV++ + Y DVWS+G E+
Sbjct: 174 IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
Query: 95 ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV 150
A +P RVL + P +++ + + F ++ CL+K+V
Sbjct: 234 AEIEPPHHE-------LNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNV 282
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 60/154 (38%), Gaps = 27/154 (17%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+ ++DFGL++ P + + T Y APEVL + YS VD WSIG I +
Sbjct: 158 IMISDFGLSK-MEDPGSVLSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F +++ +I + +Y+ P W ++
Sbjct: 216 PPFYDENDAKLFEQILKA----------------EYEFDSPYWD---------DISDSAK 250
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
D + + P R E AL+H + A T L K
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDK 284
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL----GSQRYSCPVDVWSIGCIFAEI 94
+K+ADFG++ ++ + T ++ APEV++ + Y DVWS+G E+
Sbjct: 174 IKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
Query: 95 ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV 150
A +P RVL + P +++ + + F ++ CL+K+V
Sbjct: 234 AEIEPPHHE-------LNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNV 282
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P T TL Y PE++ G + + VD+WS+G + E K
Sbjct: 173 LKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 229
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 230 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 260
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 261 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 293
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 64/160 (40%), Gaps = 31/160 (19%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
L+A + + NI K+ADFG + F ++ Y APE+ G + VDV
Sbjct: 139 LKAENLLLDADMNI-KIADFGFSNEFTFGNKLDAF-CGAPPYAAPELFQGKKYDGPEVDV 196
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
WS+G I + + F G + + R+ R G ++P Y +T
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKELRERVLR-----------GKYRIPFYMST------- 238
Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
D +LL+K LI P+ R E +K ++
Sbjct: 239 -----------DCENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + APE L ++S DVW
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPES-LAYNKFSIKSDVW 197
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 198 AFGVLLWEIAT 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
A C+ ++++VKVADFGL+R G + + APE L ++S DVW
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPES-LAYNKFSIKSDVW 198
Query: 86 SIGCIFAEIAT 96
+ G + EIAT
Sbjct: 199 AFGVLLWEIAT 209
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 57/152 (37%), Gaps = 19/152 (12%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFG AR + TL Y APE LL Y D+WS+G I + + +
Sbjct: 148 IKIIDFGFARLKPPDNQPLKTPCFTLHYAAPE-LLNQNGYDESCDLWSLGVILYTMLSGQ 206
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
FQ R LT + K D+ W KN+ Q+
Sbjct: 207 VPFQSHD---------RSLTCTSAVEIMKKIKKGDFSFEGEAW---------KNVSQEAK 248
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDL 190
DL++ L P R+ +++ D + L
Sbjct: 249 DLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQL 280
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 62/153 (40%), Gaps = 37/153 (24%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEV-----VTLWYRAPEVLLGSQRYSCPVDVWSI 87
K K VK+ADFGLA + + E T Y +PEVL YS PVD+W+
Sbjct: 141 KAKGAAVKLADFGLA------IEVNDSEAWHGFAGTPGYLSPEVL-KKDPYSKPVDIWAC 193
Query: 88 GCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD 147
G I + P F + + R++ + D +P P++ T PE +
Sbjct: 194 GVILYILLVGYPPFWDEDQ----HRLYAQIKAGAYD-YPS----PEWDTVTPEAKS---- 240
Query: 148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALK 180
L++ L P RI A+ ALK
Sbjct: 241 ------------LIDSMLTVNPKKRITADQALK 261
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL----GSQRYSCPVDVWSIGCIFAEI 94
+K+ADFG++ ++ + T ++ APEV++ + Y DVWS+G E+
Sbjct: 174 IKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
Query: 95 ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV 150
A +P RVL + P +++ + + F ++ CL+K+V
Sbjct: 234 AEIEPPHHE-------LNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNV 282
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 60/148 (40%), Gaps = 27/148 (18%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K K VK+ADFGLA + T Y +PEVL YS PVD+W+ G I
Sbjct: 141 KAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVL-KKDPYSKPVDIWACGVILY 198
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
+ P F + + R++ + D +P P++ T PE +
Sbjct: 199 ILLVGYPPFWDEDQ----HRLYAQIKAGAYD-YPS----PEWDTVTPEAKS--------- 240
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALK 180
L++ L P RI A+ ALK
Sbjct: 241 -------LIDSMLTVNPKKRITADQALK 261
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 62/153 (40%), Gaps = 37/153 (24%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEV-----VTLWYRAPEVLLGSQRYSCPVDVWSI 87
K K VK+ADFGLA + + E T Y +PEVL YS PVD+W+
Sbjct: 140 KAKGAAVKLADFGLA------IEVNDSEAWHGFAGTPGYLSPEVL-KKDPYSKPVDIWAC 192
Query: 88 GCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD 147
G I + P F + + R++ + D +P P++ T PE +
Sbjct: 193 GVILYILLVGYPPFWDEDQ----HRLYAQIKAGAYD-YPS----PEWDTVTPEAKS---- 239
Query: 148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALK 180
L++ L P RI A+ ALK
Sbjct: 240 ------------LIDSMLTVNPKKRITADQALK 260
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P T TL Y PE++ G + + VD+WS+G + E K
Sbjct: 147 LKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 203
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 204 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 234
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 235 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 62/153 (40%), Gaps = 37/153 (24%)
Query: 33 KPKSNIVKVADFGLARAFGVPVRIYTHEV-----VTLWYRAPEVLLGSQRYSCPVDVWSI 87
K K VK+ADFGLA + + E T Y +PEVL YS PVD+W+
Sbjct: 164 KAKGAAVKLADFGLA------IEVNDSEAWHGFAGTPGYLSPEVL-KKDPYSKPVDIWAC 216
Query: 88 GCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD 147
G I + P F + + R++ + D +P P++ T PE +
Sbjct: 217 GVILYILLVGYPPFWDEDQ----HRLYAQIKAGAYD-YPS----PEWDTVTPEAKS---- 263
Query: 148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALK 180
L++ L P RI A+ ALK
Sbjct: 264 ------------LIDSMLTVNPKKRITADQALK 284
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P T TL Y PE++ G + + VD+WS+G + E K
Sbjct: 152 LKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 208
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 209 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 239
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 240 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P T TL Y PE++ G + + VD+WS+G + E K
Sbjct: 164 LKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 220
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 221 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 251
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 252 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 284
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P T TL Y PE++ G + + VD+WS+G + E K
Sbjct: 148 LKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 204
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 205 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 235
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 236 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P T TL Y PE++ G + + VD+WS+G + E K
Sbjct: 150 LKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 206
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 207 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 237
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 238 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P T TL Y PE++ G + + VD+WS+G + E K
Sbjct: 147 LKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 203
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 204 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 234
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 235 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 14/74 (18%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY--------------THEVVTLWYRAPEVLLGSQRYSC 80
+S VK+ DFGLA+ + I T + T Y A EVL G+ Y+
Sbjct: 151 ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNE 210
Query: 81 PVDVWSIGCIFAEI 94
+D++S+G IF E+
Sbjct: 211 KIDMYSLGIIFFEM 224
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 32/170 (18%)
Query: 15 YQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG 74
+Q +I R L+A + + NI K+ADFG + F V ++ Y APE+ G
Sbjct: 131 HQKRIVHR-DLKAENLLLDADMNI-KIADFGFSNEFTVGGKLDAF-CGAPPYAAPELFQG 187
Query: 75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY 134
+ VDVWS+G I + + F G + + R+ R G ++P Y
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR-----------GKYRIPFY 236
Query: 135 KTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+T D +LL++ L+ P R E +K ++
Sbjct: 237 MST------------------DCENLLKRFLVLNPIKRGTLEQIMKDRWI 268
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P T TL Y PE++ G + + VD+WS+G + E K
Sbjct: 147 LKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 203
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 204 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 234
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 235 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P T TL Y PE++ G + + VD+WS+G + E K
Sbjct: 152 LKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 208
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 209 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 239
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 240 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P T TL Y PE++ G + + VD+WS+G + E K
Sbjct: 147 LKIADFGWS--VHAPSSRRTXLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 203
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 204 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 234
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 235 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 14/74 (18%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY--------------THEVVTLWYRAPEVLLGSQRYSC 80
+S VK+ DFGLA+ + I T + T Y A EVL G+ Y+
Sbjct: 151 ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNE 210
Query: 81 PVDVWSIGCIFAEI 94
+D++S+G IF E+
Sbjct: 211 KIDMYSLGIIFFEM 224
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P T TL Y PE++ G + + VD+WS+G + E K
Sbjct: 152 LKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 208
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 209 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 239
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 240 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P TL Y PE++ G + + VD+WS+G + E K
Sbjct: 147 LKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 203
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ D RI RV + TFP++ + +
Sbjct: 204 PPFEANTYQDTYKRISRV------------------EFTFPDF-----------VTEGAR 234
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 235 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 29/146 (19%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ADFG+A V T ++ APEV+ S Y D+WS+G E+A +
Sbjct: 158 VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSA-YDSKADIWSLGITAIELARGE 216
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P SE+ + +F + ++N P + +Y E+ CL+K
Sbjct: 217 PPH---SELHPMKVLFLI----PKNNPPTLEG--NYSKPLKEFVEACLNKE--------- 258
Query: 159 DLLEKTLIYCPATRINAENALKHKYF 184
P+ R A+ LKHK+
Sbjct: 259 ----------PSFRPTAKELLKHKFI 274
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P T TL Y PE++ G + + VD+WS+G + E K
Sbjct: 151 LKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 207
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 208 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 238
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 239 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 271
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 29/146 (19%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ADFG+A V T ++ APEV+ S Y D+WS+G E+A +
Sbjct: 163 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA-YDSKADIWSLGITAIELARGE 221
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P SE+ + +F + ++N P + +Y E+ CL+K
Sbjct: 222 P---PHSELHPMKVLFLI----PKNNPPTLEG--NYSKPLKEFVEACLNKE--------- 263
Query: 159 DLLEKTLIYCPATRINAENALKHKYF 184
P+ R A+ LKHK+
Sbjct: 264 ----------PSFRPTAKELLKHKFI 279
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P T TL Y PE++ G + + VD+WS+G + E K
Sbjct: 146 LKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 202
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 203 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 233
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 234 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 266
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 29/146 (19%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ADFG+A V T ++ APEV+ S Y D+WS+G E+A +
Sbjct: 143 VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSA-YDSKADIWSLGITAIELARGE 201
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P SE+ + +F + ++N P + +Y E+ CL+K
Sbjct: 202 P---PHSELHPMKVLFLI----PKNNPPTLEG--NYSKPLKEFVEACLNKE--------- 243
Query: 159 DLLEKTLIYCPATRINAENALKHKYF 184
P+ R A+ LKHK+
Sbjct: 244 ----------PSFRPTAKELLKHKFI 259
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P T TL Y PE + G + + VD+WS+G + E K
Sbjct: 152 LKIADFGWS--VHAPSSRRTTLCGTLDYLPPEXIEG-RXHDEKVDLWSLGVLCYEFLVGK 208
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 209 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 239
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 240 DLISRLLKHNPSQRPXLREVLEHPWITANSSKP 272
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 35 KSNIVKVADFGLARAFGV--PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
++N++K+ADFGLAR + T+ + + + APE L + Y+ DVWS G +
Sbjct: 192 ENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMW 250
Query: 93 EIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 251 EIFTLGGSPYPGIPVEELFKLLK 273
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 35 KSNIVKVADFGLARAFGV--PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
++N++K+ADFGLAR + T+ + + + APE L + Y+ DVWS G +
Sbjct: 192 ENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMW 250
Query: 93 EIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 251 EIFTLGGSPYPGIPVEELFKLLK 273
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ DFG + V T ++ APEV+ + Y VD+WS+G + E+ +
Sbjct: 155 VKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGE 213
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK 151
P + ++ + L+ I + P + F ++ N CLD V+
Sbjct: 214 PPYLNENPLRALYLI-------ATNGTPELQNPEKLSAIFRDFLNRCLDMDVE 259
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 31/159 (19%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
L+A + + NI K+ADFG + F ++ Y APE+ G + VDV
Sbjct: 139 LKAENLLLDADXNI-KIADFGFSNEFTFGNKLDAF-CGAPPYAAPELFQGKKYDGPEVDV 196
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
WS+G I + + F G + + R+ R G ++P Y +T
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKELRERVLR-----------GKYRIPFYXST------- 238
Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
D +LL+K LI P+ R E K ++
Sbjct: 239 -----------DCENLLKKFLILNPSKRGTLEQIXKDRW 266
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPV 82
AT + N VK+ DFGL + Y E WY APE L S ++S
Sbjct: 142 ATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY-APESLTES-KFSVAS 199
Query: 83 DVWSIGCIFAEIAT 96
DVWS G + E+ T
Sbjct: 200 DVWSFGVVLYELFT 213
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 29/146 (19%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ADFG+A V T ++ APEV+ S Y D+WS+G E+A +
Sbjct: 143 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA-YDSKADIWSLGITAIELARGE 201
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P SE+ + +F + ++N P + +Y E+ CL+K
Sbjct: 202 P---PHSELHPMKVLFLI----PKNNPPTLEG--NYSKPLKEFVEACLNKE--------- 243
Query: 159 DLLEKTLIYCPATRINAENALKHKYF 184
P+ R A+ LKHK+
Sbjct: 244 ----------PSFRPTAKELLKHKFI 259
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P T TL Y PE++ G + + VD+WS+G + E K
Sbjct: 148 LKIADFGWS--CHAPSSRRTTLSGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 204
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 205 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 235
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 236 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 28/162 (17%)
Query: 30 FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
C K++ VK+ DFGLA P I T + APE+ + + D+W+IG
Sbjct: 181 MCETKKASSVKIIDFGLATKLN-PDEIVKVTTATAEFAAPEI-VDREPVGFYTDMWAIGV 238
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH 149
+ + + F G+ +++ L + R ED + VS PE +F
Sbjct: 239 LGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVS---------PEAKDF----- 284
Query: 150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF-ADKTDL 190
+KN LL+K P R+ +AL+H + D ++L
Sbjct: 285 IKN-------LLQKE----PRKRLTVHDALEHPWLKGDHSNL 315
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 39 VKVADFGL-ARAFGVPVRIYTHEVVTLWYRAPEVLL----GSQRYSCPVDVWSIGCIFAE 93
+K+ADFG+ A+ ++ + T ++ APEV++ + Y DVWS+G E
Sbjct: 147 IKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIE 206
Query: 94 IATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV 150
+A +P RVL + P +++ + + F ++ CL+K+V
Sbjct: 207 MAEIEPPHHE-------LNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNV 256
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT- 96
+K+ DFG++ G + + V T Y +PE L G+ YS D+WS+G E+A
Sbjct: 163 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVG 218
Query: 97 RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD--YKTTFPEWSNFCLDKH 149
R P+ G + IF +L + P KLP + F ++ N CL K+
Sbjct: 219 RYPIGSGSGSM----AIFELLDYIVNEPPP---KLPSGVFSLEFQDFVNKCLIKN 266
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF----GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
A C+ +S VKVADFGLAR V+ + H + + + A E L + R++
Sbjct: 151 AARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALES-LQTYRFTTKS 209
Query: 83 DVWSIGCIFAEIATR 97
DVWS G + E+ TR
Sbjct: 210 DVWSFGVLLWELLTR 224
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 11 QVGTYQVKITTRLFLQ---ATSFCIKPKSNIVKVADFGLARAFGVPVRIYT--------H 59
QV ++ R F+ AT C+ ++ +VK+ADFGL+R IY+ +
Sbjct: 182 QVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR------NIYSADYYKADGN 235
Query: 60 EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+ + + + PE + RY+ DVW+ G + EI
Sbjct: 236 DAIPIRWMPPESIF-YNRYTTESDVWAYGVVLWEI 269
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
++N++K+ADFGLAR + Y T+ + + + APE L + Y+ DVWS G +
Sbjct: 179 ENNVMKIADFGLARDIN-NIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLM 236
Query: 92 AEIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 237 WEIFTLGGSPYPGIPVEELFKLLK 260
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
++N++K+ADFGLAR + Y T+ + + + APE L + Y+ DVWS G +
Sbjct: 192 ENNVMKIADFGLARDIN-NIDYYKNTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLM 249
Query: 92 AEIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 250 WEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
++N++K+ADFGLAR + Y T+ + + + APE L + Y+ DVWS G +
Sbjct: 184 ENNVMKIADFGLARDIN-NIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLM 241
Query: 92 AEIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 242 WEIFTLGGSPYPGIPVEELFKLLK 265
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
++N++K+ADFGLAR + Y T+ + + + APE L + Y+ DVWS G +
Sbjct: 192 ENNVMKIADFGLARDIN-NIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLM 249
Query: 92 AEIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 250 WEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
++N++K+ADFGLAR + Y T+ + + + APE L + Y+ DVWS G +
Sbjct: 192 ENNVMKIADFGLARDIN-NIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLM 249
Query: 92 AEIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 250 WEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
++N++K+ADFGLAR + Y T+ + + + APE L + Y+ DVWS G +
Sbjct: 181 ENNVMKIADFGLARDIN-NIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLM 238
Query: 92 AEIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 239 WEIFTLGGSPYPGIPVEELFKLLK 262
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
++N++K+ADFGLAR + Y T+ + + + APE L + Y+ DVWS G +
Sbjct: 192 ENNVMKIADFGLARDIN-NIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLM 249
Query: 92 AEIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 250 WEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
++N++K+ADFGLAR + Y T+ + + + APE L + Y+ DVWS G +
Sbjct: 192 ENNVMKIADFGLARDIN-NIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLM 249
Query: 92 AEIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 250 WEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
++N++K+ADFGLAR + Y T+ + + + APE L + Y+ DVWS G +
Sbjct: 192 ENNVMKIADFGLARDIN-NIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLM 249
Query: 92 AEIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 250 WEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ DFG + V T ++ APEV+ + Y VD+WS+G + E+ +
Sbjct: 155 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGE 213
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK 151
P + ++ + L+ I + P + F ++ N CLD V+
Sbjct: 214 PPYLNENPLRALYLI-------ATNGTPELQNPEKLSAIFRDFLNRCLDMDVE 259
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
VK+ DFGL + + T TL Y +PE + SQ Y VD++++G I AE+
Sbjct: 175 VKIGDFGLVTSLKNDGK-RTRSKGTLRYMSPEQI-SSQDYGKEVDLYALGLILAEL 228
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+A+FG + P T TL Y PE++ G + + VD+WS+G + E K
Sbjct: 149 LKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 205
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 206 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 236
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 237 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 269
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P TL Y PE++ G + + VD+WS+G + E K
Sbjct: 173 LKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 229
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 230 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 260
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 261 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 293
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
++N++K+ADFGLAR + Y T+ + + + APE L + Y+ DVWS G +
Sbjct: 238 ENNVMKIADFGLARDIN-NIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLM 295
Query: 92 AEIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 296 WEIFTLGGSPYPGIPVEELFKLLK 319
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPV 82
AT + N VK+ DFGL + + E WY APE L S ++S
Sbjct: 141 ATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY-APESLTES-KFSVAS 198
Query: 83 DVWSIGCIFAEIAT 96
DVWS G + E+ T
Sbjct: 199 DVWSFGVVLYELFT 212
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P TL Y PE++ G + + VD+WS+G + E K
Sbjct: 152 LKIADFGWS--VHAPSSRRXXLXGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 208
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 209 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 239
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 240 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P TL Y PE++ G + + VD+WS+G + E K
Sbjct: 149 LKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 205
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 206 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 236
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 237 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 269
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS---QRYSCPVDVWSIGCIF 91
+S +K+ DFG++ V T + Y APE + S Q Y DVWS+G
Sbjct: 161 RSGNIKLCDFGISGQL-VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITL 219
Query: 92 AEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK 148
E+AT R P + +S DQL ++ + P N S+ ++ +F + N CL K
Sbjct: 220 YELATGRFPYPKWNSVFDQLTQVVKG-DPPQLSN----SEEREFSPSFINFVNLCLTK 272
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 59/148 (39%), Gaps = 33/148 (22%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLA F T+ T Y APEV + C D+WS G + + T
Sbjct: 166 IKIIDFGLAELFKSDEH-STNAAGTALYMAPEVFKRDVTFKC--DIWSAGVVMYFLLTGC 222
Query: 99 PLFQGDS--EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQD 156
F G S E+ Q K T+ E N+ ++ + L
Sbjct: 223 LPFTGTSLEEVQQ-------------------------KATYKE-PNYAVE--CRPLTPQ 254
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYF 184
+DLL++ L P R +A L H++F
Sbjct: 255 AVDLLKQMLTKDPERRPSAAQVLHHEWF 282
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P TL Y PE++ G + + VD+WS+G + E K
Sbjct: 150 LKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 206
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 207 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 237
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 238 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 29/166 (17%)
Query: 30 FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
+ K + I+K+ DFG A+ + T T +Y APEVL G ++Y D+WS+G
Sbjct: 148 YTSKRPNAILKLTDFGFAKETTSHNSL-TEPCYTPYYVAPEVL-GPEKYDKSCDMWSLGV 205
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS---KLPDYKTTFPEWSNFCL 146
I + P F + + PG+ ++ Y+ PEWS +
Sbjct: 206 IMYILLCGYPPFYSNHGLAI---------------SPGMKTRIRMGQYEFPNPEWSE--V 248
Query: 147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
+ VK L+ L P R+ + H + T +P+
Sbjct: 249 SEEVKM-------LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 287
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 56/151 (37%), Gaps = 31/151 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQR-----YSCPVDVWSIGCIFAE 93
+K+ DFG + P T Y APE++ S Y VD+WS G I
Sbjct: 150 IKLTDFGFSCQLD-PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 208
Query: 94 IATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL 153
+ P F ++ L I +Y+ PEW ++ VK
Sbjct: 209 LLAGSPPFWHRKQMLMLRMIMS----------------GNYQFGSPEWDDYS--DTVK-- 248
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYF 184
DL+ + L+ P R AE AL H +F
Sbjct: 249 -----DLVSRFLVVQPQKRYTAEEALAHPFF 274
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 32/143 (22%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P T TL Y PE++ G + + VD+WS+G + E K
Sbjct: 150 LKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 206
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 207 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 237
Query: 159 DLLEKTLIYCPATRINAENALKH 181
DL+ + L + P+ R L+H
Sbjct: 238 DLISRLLKHNPSQRPMLREVLEH 260
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+A+FG + P T TL Y PE++ G + + VD+WS+G + E K
Sbjct: 150 LKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 206
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 207 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 237
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 238 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 35 KSNIVKVADFGLARAFGV--PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
+ N++K+ADFGLAR + T+ + + + APE L + Y+ DVWS G +
Sbjct: 185 EDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLW 243
Query: 93 EIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 244 EIFTLGGSPYPGVPVEELFKLLK 266
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P TL Y PE++ G + + VD+WS+G + E K
Sbjct: 147 LKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 203
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 204 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 234
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 235 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 40/171 (23%)
Query: 30 FCIKPKSNIVKVADFGLAR-----AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
+ K K ++K+ DFG A+ A P T +Y APEVL G ++Y D+
Sbjct: 161 YTSKEKDAVLKLTDFGFAKETTQNALQTPC-------YTPYYVAPEVL-GPEKYDKSCDM 212
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS---KLPDYKTTFPEW 141
WS+G I + P F ++ + PG+ +L Y PEW
Sbjct: 213 WSLGVIMYILLCGFPPFYSNT---------------GQAISPGMKRRIRLGQYGFPNPEW 257
Query: 142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
S + +D L+ L P R+ + H + +P+
Sbjct: 258 S---------EVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQ 299
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 32/143 (22%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P T TL Y PE++ G + + VD+WS+G + E K
Sbjct: 144 LKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 200
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 201 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 231
Query: 159 DLLEKTLIYCPATRINAENALKH 181
DL+ + L + P+ R L+H
Sbjct: 232 DLISRLLKHNPSQRPMLREVLEH 254
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 39 VKVADFGLARA---FGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
K++DFGLARA F V + + V T Y APE L G + D++S G + EI
Sbjct: 172 AKISDFGLARASEKFAQTV-MXSRIVGTTAYMAPEALRG--EITPKSDIYSFGVVLLEII 228
Query: 96 TRKP 99
T P
Sbjct: 229 TGLP 232
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 14/73 (19%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY--------------THEVVTLWYRAPEVLLGSQRYSC 80
+S VK+ DFGLA+ + I T + T Y A EVL G+ Y+
Sbjct: 151 ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNE 210
Query: 81 PVDVWSIGCIFAE 93
+D +S+G IF E
Sbjct: 211 KIDXYSLGIIFFE 223
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
AT C+ + +VK+ DFG++R R+ ++ + + PE +L ++++ DV
Sbjct: 185 ATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL-YRKFTTESDV 243
Query: 85 WSIGCIFAEIAT--RKPLFQ 102
WS G + EI T ++P +Q
Sbjct: 244 WSFGVVLWEIFTYGKQPWYQ 263
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 29/166 (17%)
Query: 30 FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
+ K + I+K+ DFG A+ + T T +Y APEVL G ++Y D+WS+G
Sbjct: 155 YTSKRPNAILKLTDFGFAKETTSHNSLTT-PCYTPYYVAPEVL-GPEKYDKSCDMWSLGV 212
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS---KLPDYKTTFPEWSNFCL 146
I + P F + + PG+ ++ Y+ PEWS +
Sbjct: 213 IMYILLCGYPPFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEWSE--V 255
Query: 147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
+ VK L+ L P R+ + H + T +P+
Sbjct: 256 SEEVKM-------LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 294
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P TL Y PE++ G + + VD+WS+G + E K
Sbjct: 147 LKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 203
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 204 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 234
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 235 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
AT C+ + +VK+ DFG++R R+ ++ + + PE +L ++++ DV
Sbjct: 162 ATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL-YRKFTTESDV 220
Query: 85 WSIGCIFAEIAT--RKPLFQ 102
WS G + EI T ++P +Q
Sbjct: 221 WSFGVVLWEIFTYGKQPWYQ 240
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 40/171 (23%)
Query: 30 FCIKPKSNIVKVADFGLAR-----AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
+ K K ++K+ DFG A+ A P T +Y APEVL G ++Y D+
Sbjct: 142 YTSKEKDAVLKLTDFGFAKETTQNALQTPC-------YTPYYVAPEVL-GPEKYDKSCDM 193
Query: 85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS---KLPDYKTTFPEW 141
WS+G I + P F ++ + PG+ +L Y PEW
Sbjct: 194 WSLGVIMYILLCGFPPFYSNT---------------GQAISPGMKRRIRLGQYGFPNPEW 238
Query: 142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
S + +D L+ L P R+ + H + +P+
Sbjct: 239 S---------EVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQ 280
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 29/166 (17%)
Query: 30 FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
+ K + I+K+ DFG A+ + T T +Y APEVL G ++Y D+WS+G
Sbjct: 154 YTSKRPNAILKLTDFGFAKETTSHNSLTT-PCYTPYYVAPEVL-GPEKYDKSCDMWSLGV 211
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS---KLPDYKTTFPEWSNFCL 146
I + P F + + PG+ ++ Y+ PEWS +
Sbjct: 212 IMYILLCGYPPFYSNHGLAI---------------SPGMKTRIRMGQYEFPNPEWSE--V 254
Query: 147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
+ VK L+ L P R+ + H + T +P+
Sbjct: 255 SEEVKM-------LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 293
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
AT C+ + +VK+ DFG++R R+ ++ + + PE +L ++++ DV
Sbjct: 156 ATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL-YRKFTTESDV 214
Query: 85 WSIGCIFAEIAT--RKPLFQ 102
WS G + EI T ++P +Q
Sbjct: 215 WSFGVVLWEIFTYGKQPWYQ 234
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 56/151 (37%), Gaps = 31/151 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQR-----YSCPVDVWSIGCIFAE 93
+K+ DFG + P T Y APE++ S Y VD+WS G I
Sbjct: 163 IKLTDFGFSCQLD-PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 221
Query: 94 IATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL 153
+ P F ++ L I +Y+ PEW ++ VK
Sbjct: 222 LLAGSPPFWHRKQMLMLRMIMS----------------GNYQFGSPEWDDYS--DTVK-- 261
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYF 184
DL+ + L+ P R AE AL H +F
Sbjct: 262 -----DLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
+ N++K+ADFGLAR + Y T+ + + + APE L + Y+ DVWS G +
Sbjct: 226 EDNVMKIADFGLARDIH-HIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLL 283
Query: 92 AEIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 284 WEIFTLGGSPYPGVPVEELFKLLK 307
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 29/166 (17%)
Query: 30 FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
+ K + I+K+ DFG A+ + T T +Y APEVL G ++Y D+WS+G
Sbjct: 156 YTSKRPNAILKLTDFGFAKETTSHNSLTT-PCYTPYYVAPEVL-GPEKYDKSCDMWSLGV 213
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS---KLPDYKTTFPEWSNFCL 146
I + P F + + PG+ ++ Y+ PEWS +
Sbjct: 214 IMYILLCGYPPFYSNHGLAI---------------SPGMKTRIRMGQYEFPNPEWSE--V 256
Query: 147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
+ VK L+ L P R+ + H + T +P+
Sbjct: 257 SEEVKM-------LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 295
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 29/166 (17%)
Query: 30 FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
+ K + I+K+ DFG A+ + T T +Y APEVL G ++Y D+WS+G
Sbjct: 149 YTSKRPNAILKLTDFGFAKETTSHNSLTT-PCYTPYYVAPEVL-GPEKYDKSCDMWSLGV 206
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS---KLPDYKTTFPEWSNFCL 146
I + P F + + PG+ ++ Y+ PEWS +
Sbjct: 207 IMYILLCGYPPFYSNHGLAI---------------SPGMKTRIRMGQYEFPNPEWSE--V 249
Query: 147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
+ VK L+ L P R+ + H + T +P+
Sbjct: 250 SEEVKM-------LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 288
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVD 83
A C+ +VKV+DFGL+R V YT V + + + PEVL+ S ++S D
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSVGSKFPVRWSPPEVLMYS-KFSSKSD 188
Query: 84 VWSIGCIFAEI 94
+W+ G + EI
Sbjct: 189 IWAFGVLMWEI 199
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 13/70 (18%)
Query: 37 NIVKVADFGLARAFG---------VPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDV 84
++VKV DFGL A P+ Y T +V T Y +PE + G+ YS VD+
Sbjct: 155 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNS-YSHKVDI 213
Query: 85 WSIGCIFAEI 94
+S+G I E+
Sbjct: 214 FSLGLILFEL 223
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P TL Y PE++ G + + VD+WS+G + E K
Sbjct: 150 LKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 206
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 207 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 237
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 238 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
++N++++ADFGLAR + Y T+ + + + APE L + Y+ DVWS G +
Sbjct: 192 ENNVMRIADFGLARDIN-NIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLM 249
Query: 92 AEIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 250 WEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+ KVADFGLAR + YT + + APE L R++ DVWS G + E+
Sbjct: 401 VCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTEL 457
Query: 95 ATRK----PLFQGDSEIDQLFRIFRVLTTP 120
T+ P +DQ+ R +R+ P
Sbjct: 458 TTKGRVPYPGMVNREVLDQVERGYRMPCPP 487
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 29/166 (17%)
Query: 30 FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
+ K + I+K+ DFG A+ + T T +Y APEVL G ++Y D+WS+G
Sbjct: 164 YTSKRPNAILKLTDFGFAKETTSHNSLTT-PCYTPYYVAPEVL-GPEKYDKSCDMWSLGV 221
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS---KLPDYKTTFPEWSNFCL 146
I + P F + + PG+ ++ Y+ PEWS +
Sbjct: 222 IMYILLCGYPPFYSNHGLAI---------------SPGMKTRIRMGQYEFPNPEWSE--V 264
Query: 147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
+ VK L+ L P R+ + H + T +P+
Sbjct: 265 SEEVKM-------LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 303
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P TL Y PE++ G + + VD+WS+G + E K
Sbjct: 148 LKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 204
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 205 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 235
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + P+ R L+H + + P
Sbjct: 236 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVD 83
A C+ +VKV+DFGL+R V YT V + + + PEVL+ S ++S D
Sbjct: 131 AARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSVGSKFPVRWSPPEVLMYS-KFSSKSD 187
Query: 84 VWSIGCIFAEI 94
+W+ G + EI
Sbjct: 188 IWAFGVLMWEI 198
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 29/166 (17%)
Query: 30 FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
+ K + I+K+ DFG A+ + T T +Y APEVL G ++Y D+WS+G
Sbjct: 150 YTSKRPNAILKLTDFGFAKETTSHNSLTT-PCYTPYYVAPEVL-GPEKYDKSCDMWSLGV 207
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS---KLPDYKTTFPEWSNFCL 146
I + P F + + PG+ ++ Y+ PEWS +
Sbjct: 208 IMYILLCGYPPFYSNHGLAI---------------SPGMKTRIRMGQYEFPNPEWSE--V 250
Query: 147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
+ VK L+ L P R+ + H + T +P+
Sbjct: 251 SEEVKM-------LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 289
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 39 VKVADFGLARAF---GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ADFG+ + GV + + T Y APE++ Q Y VD W+ G + E+
Sbjct: 160 IKIADFGMCKENIWDGVTTKXFCG---TPDYIAPEII-AYQPYGKSVDWWAFGVLLYEML 215
Query: 96 TRKPLFQGDSEIDQLFR 112
+ F+G+ E D+LF+
Sbjct: 216 AGQAPFEGEDE-DELFQ 231
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 39 VKVADFGLARAFGVPV-RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE-IAT 96
++++D GLA VP + V T+ Y APEV+ ++RY+ D W++GC+ E IA
Sbjct: 325 IRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVV-KNERYTFSPDWWALGCLLYEMIAG 381
Query: 97 RKPLFQGDSEIDQ 109
+ P Q +I +
Sbjct: 382 QSPFQQRKKKIKR 394
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 29/166 (17%)
Query: 30 FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
+ K + I+K+ DFG A+ + T T +Y APEVL G ++Y D+WS+G
Sbjct: 148 YTSKRPNAILKLTDFGFAKETTSHNSLTT-PCYTPYYVAPEVL-GPEKYDKSCDMWSLGV 205
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS---KLPDYKTTFPEWSNFCL 146
I + P F + + PG+ ++ Y+ PEWS +
Sbjct: 206 IMYILLCGYPPFYSNHGLAI---------------SPGMKTRIRMGQYEFPNPEWSE--V 248
Query: 147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
+ VK L+ L P R+ + H + T +P+
Sbjct: 249 SEEVKM-------LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 287
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVD 83
A C+ +VKV+DFGL+R V YT V + + + PEVL+ S ++S D
Sbjct: 138 AARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSVGSKFPVRWSPPEVLMYS-KFSSKSD 194
Query: 84 VWSIGCIFAEI 94
+W+ G + EI
Sbjct: 195 IWAFGVLMWEI 205
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 72/189 (38%), Gaps = 46/189 (24%)
Query: 16 QVKITTRLFLQATSFC---------IKPKSNI------VKVADFGLARAFGVPVRIYTHE 60
+ + R L+A SF +KP++ + ++++DFG + P
Sbjct: 201 ETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLE-PGEKLREL 259
Query: 61 VVTLWYRAPEVLLGSQRYSCP-----VDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFR 115
T Y APE+L S + P VD+W+ G I + P F +I L I
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIME 319
Query: 116 VLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINA 175
Y+ + PEW + VK DL+ + L P R+ A
Sbjct: 320 ----------------GQYQFSSPEWDDRS--STVK-------DLISRLLQVDPEARLTA 354
Query: 176 ENALKHKYF 184
E AL+H +F
Sbjct: 355 EQALQHPFF 363
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 56/151 (37%), Gaps = 31/151 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQR-----YSCPVDVWSIGCIFAE 93
+K+ DFG + P T Y APE++ S Y VD+WS G I
Sbjct: 163 IKLTDFGFSCQLD-PGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 221
Query: 94 IATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL 153
+ P F ++ L I +Y+ PEW ++ VK
Sbjct: 222 LLAGSPPFWHRKQMLMLRMIMS----------------GNYQFGSPEWDDYS--DTVK-- 261
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYF 184
DL+ + L+ P R AE AL H +F
Sbjct: 262 -----DLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
+ N++K+ADFGLAR + Y T+ + + + APE L + Y+ DVWS G +
Sbjct: 185 EDNVMKIADFGLARDIH-HIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLL 242
Query: 92 AEIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 243 WEIFTLGGSPYPGVPVEELFKLLK 266
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
+ N++K+ADFGLAR + Y T+ + + + APE L + Y+ DVWS G +
Sbjct: 185 EDNVMKIADFGLARDIH-HIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLL 242
Query: 92 AEIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 243 WEIFTLGGSPYPGVPVEELFKLLK 266
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 39 VKVADFGLARAFGVPV-RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE-IAT 96
++++D GLA VP + V T+ Y APEV+ ++RY+ D W++GC+ E IA
Sbjct: 325 IRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVV-KNERYTFSPDWWALGCLLYEMIAG 381
Query: 97 RKPLFQGDSEIDQ 109
+ P Q +I +
Sbjct: 382 QSPFQQRKKKIKR 394
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
+ N++K+ADFGLAR + Y T+ + + + APE L + Y+ DVWS G +
Sbjct: 174 EDNVMKIADFGLARDIH-HIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLL 231
Query: 92 AEIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 232 WEIFTLGGSPYPGVPVEELFKLLK 255
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVD 83
A C+ +VKV+DFGL+R V YT V + + + PEVL+ S ++S D
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSVGSKFPVRWSPPEVLMYS-KFSSKSD 203
Query: 84 VWSIGCIFAEI 94
+W+ G + EI
Sbjct: 204 IWAFGVLMWEI 214
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+ KVADFGLAR + YT + + APE L R++ DVWS G + E+
Sbjct: 318 VCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTEL 374
Query: 95 ATRK----PLFQGDSEIDQLFRIFRVLTTP 120
T+ P +DQ+ R +R+ P
Sbjct: 375 TTKGRVPYPGMVNREVLDQVERGYRMPCPP 404
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
+ N++K+ADFGLAR + Y T+ + + + APE L + Y+ DVWS G +
Sbjct: 170 EDNVMKIADFGLARDIH-HIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLL 227
Query: 92 AEIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 228 WEIFTLGGSPYPGVPVEELFKLLK 251
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+ KVADFGLAR + YT + + APE L R++ DVWS G + E+
Sbjct: 318 VCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTEL 374
Query: 95 ATRK----PLFQGDSEIDQLFRIFRVLTTP 120
T+ P +DQ+ R +R+ P
Sbjct: 375 TTKGRVPYPGMVNREVLDQVERGYRMPCPP 404
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVD 83
A C+ +VKV+DFGL+R V YT V + + + PEVL+ S ++S D
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSVGSKFPVRWSPPEVLMYS-KFSSKSD 183
Query: 84 VWSIGCIFAEI 94
+W+ G + EI
Sbjct: 184 IWAFGVLMWEI 194
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 13/70 (18%)
Query: 37 NIVKVADFGLARAFG---------VPVRIY-TH--EVVTLWYRAPEVLLGSQRYSCPVDV 84
++VKV DFGL A P+ Y TH +V T Y +PE + G+ YS VD+
Sbjct: 201 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNN-YSHKVDI 259
Query: 85 WSIGCIFAEI 94
+S+G I E+
Sbjct: 260 FSLGLILFEL 269
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+ I+K+ DFGLAR + ++ + APEV+ S +S DVWS G + E+
Sbjct: 151 SNKILKITDFGLAREWHRTTKMSAAGAYA--WMAPEVIRASM-FSKGSDVWSYGVLLWEL 207
Query: 95 ATRKPLFQG 103
T + F+G
Sbjct: 208 LTGEVPFRG 216
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
+ N++K+ADFGLAR + Y T+ + + + APE L + Y+ DVWS G +
Sbjct: 185 EDNVMKIADFGLARDIH-HIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLL 242
Query: 92 AEIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 243 WEIFTLGGSPYPGVPVEELFKLLK 266
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+ KVADFGLAR + YT + + APE L R++ DVWS G + E+
Sbjct: 318 VCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTEL 374
Query: 95 ATRK----PLFQGDSEIDQLFRIFRVLTTP 120
T+ P +DQ+ R +R+ P
Sbjct: 375 TTKGRVPYPGMVNREVLDQVERGYRMPCPP 404
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
+ N++K+ADFGLAR + Y T+ + + + APE L + Y+ DVWS G +
Sbjct: 177 EDNVMKIADFGLARDIH-HIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLL 234
Query: 92 AEIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 235 WEIFTLGGSPYPGVPVEELFKLLK 258
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 35 KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
+ N++K+ADFGLAR + Y T+ + + + APE L + Y+ DVWS G +
Sbjct: 178 EDNVMKIADFGLARDIH-HIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLL 235
Query: 92 AEIATRKPLFQGDSEIDQLFRIFR 115
EI T +++LF++ +
Sbjct: 236 WEIFTLGGSPYPGVPVEELFKLLK 259
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 39 VKVADFGLARAF---GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
+K+ADFG+ + GV + + T Y APE++ Q Y VD W+ G + E+
Sbjct: 481 IKIADFGMCKENIWDGVTTKXFCG---TPDYIAPEII-AYQPYGKSVDWWAFGVLLYEML 536
Query: 96 TRKPLFQGDSEIDQLFR 112
+ F+G+ E D+LF+
Sbjct: 537 AGQAPFEGEDE-DELFQ 552
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL---------LGSQR 77
A C+ + VKVADFGLAR +Y E ++ + L L +Q+
Sbjct: 159 AARNCMLDEKFTVKVADFGLAR------DMYDKEXXSVHNKTGAKLPVKWMALESLQTQK 212
Query: 78 YSCPVDVWSIGCIFAEIATR 97
++ DVWS G + E+ TR
Sbjct: 213 FTTKSDVWSFGVLLWELMTR 232
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 59/154 (38%), Gaps = 27/154 (17%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+ ++DFGL++ G + + T Y APEVL + YS VD WSIG I +
Sbjct: 162 IMISDFGLSKMEG-KGDVMSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVIAYILLCGY 219
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F +++ +I + +Y+ P W ++
Sbjct: 220 PPFYDENDSKLFEQILKA----------------EYEFDSPYWD---------DISDSAK 254
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
D + + P R E A +H + A T L K
Sbjct: 255 DFIRNLMEKDPNKRYTCEQAARHPWIAGDTALNK 288
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 29/166 (17%)
Query: 30 FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
+ K + I+K+ DFG A+ + T T +Y APEVL G ++Y D+WS+G
Sbjct: 200 YTSKRPNAILKLTDFGFAKETTSHNSLTT-PCYTPYYVAPEVL-GPEKYDKSCDMWSLGV 257
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS---KLPDYKTTFPEWSNFCL 146
I + P F + + PG+ ++ Y+ PEWS +
Sbjct: 258 IMYILLCGYPPFYSNHGLAI---------------SPGMKTRIRMGQYEFPNPEWSE--V 300
Query: 147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
+ VK L+ L P R+ + H + T +P+
Sbjct: 301 SEEVKM-------LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 339
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 29/166 (17%)
Query: 30 FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
+ K + I+K+ DFG A+ + T T +Y APEVL G ++Y D+WS+G
Sbjct: 150 YTSKRPNAILKLTDFGFAKETTSHNSLTT-PCYTPYYVAPEVL-GPEKYDKSCDMWSLGV 207
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS---KLPDYKTTFPEWSNFCL 146
I + P F + + PG+ ++ Y+ PEWS +
Sbjct: 208 IMYILLCGYPPFYSNHGLAI---------------SPGMKTRIRMGQYEFPNPEWSE--V 250
Query: 147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
+ VK L+ L P R+ + H + T +P+
Sbjct: 251 SEEVKM-------LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 289
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 29/166 (17%)
Query: 30 FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
+ K + I+K+ DFG A+ + T T +Y APEVL G ++Y D+WS+G
Sbjct: 194 YTSKRPNAILKLTDFGFAKETTSHNSLTT-PCYTPYYVAPEVL-GPEKYDKSCDMWSLGV 251
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS---KLPDYKTTFPEWSNFCL 146
I + P F + + PG+ ++ Y+ PEWS +
Sbjct: 252 IMYILLCGYPPFYSNHGLAI---------------SPGMKTRIRMGQYEFPNPEWSE--V 294
Query: 147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
+ VK L+ L P R+ + H + T +P+
Sbjct: 295 SEEVKM-------LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 333
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 39 VKVADFGLARA---FGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
K++DFGLARA F V + V T Y APE L G + D++S G + EI
Sbjct: 172 AKISDFGLARASEKFAQTV-MXXRIVGTTAYMAPEALRG--EITPKSDIYSFGVVLLEII 228
Query: 96 TRKP 99
T P
Sbjct: 229 TGLP 232
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ DFG + V T ++ APEV+ + Y VD+WS+G + E+ +
Sbjct: 155 VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGE 213
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK 151
P + ++ + L+ I + P + F ++ N CL+ V+
Sbjct: 214 PPYLNENPLRALYLI-------ATNGTPELQNPEKLSAIFRDFLNRCLEMDVE 259
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 54/151 (35%), Gaps = 24/151 (15%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLW-----YRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
V++ADFG++ I ++V + + APEV+ + Y D+WS G E
Sbjct: 160 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE 219
Query: 94 IATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL 153
+AT + + L + E L Y +F + + CL K
Sbjct: 220 LATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKD---- 275
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYF 184
P R A L+HK+F
Sbjct: 276 ---------------PEKRPTAAELLRHKFF 291
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ DFG + V T ++ APEV+ + Y VD+WS+G + E+ +
Sbjct: 156 VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGE 214
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK 151
P + ++ + L+ I + P + F ++ N CL+ V+
Sbjct: 215 PPYLNENPLRALYLI-------ATNGTPELQNPEKLSAIFRDFLNRCLEMDVE 260
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 54/151 (35%), Gaps = 24/151 (15%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLW-----YRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
V++ADFG++ I ++V + + APEV+ + Y D+WS G E
Sbjct: 155 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE 214
Query: 94 IATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL 153
+AT + + L + E L Y +F + + CL K
Sbjct: 215 LATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKD---- 270
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYF 184
P R A L+HK+F
Sbjct: 271 ---------------PEKRPTAAELLRHKFF 286
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+ KVADFGLAR + YT + + APE L R++ DVWS G + E+
Sbjct: 149 VCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTEL 205
Query: 95 ATRK----PLFQGDSEIDQLFRIFRVLTTP 120
T+ P +DQ+ R +R+ P
Sbjct: 206 TTKGRVPYPGMVNREVLDQVERGYRMPCPP 235
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+ KVADFGLAR + YT + + APE L R++ DVWS G + E+
Sbjct: 152 VCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTEL 208
Query: 95 ATRK----PLFQGDSEIDQLFRIFRVLTTP 120
T+ P +DQ+ R +R+ P
Sbjct: 209 TTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ DFG + V T ++ APEV+ + Y VD+WS+G + E+ +
Sbjct: 156 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGE 214
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK 151
P + ++ + L+ I + P + F ++ N CL+ V+
Sbjct: 215 PPYLNENPLRALYLI-------ATNGTPELQNPEKLSAIFRDFLNRCLEMDVE 260
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+ KVADFGLAR + YT + + APE L R++ DVWS G + E+
Sbjct: 152 VCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTEL 208
Query: 95 ATRK----PLFQGDSEIDQLFRIFRVLTTP 120
T+ P +DQ+ R +R+ P
Sbjct: 209 TTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+ KVADFGLAR + YT + + APE L R++ DVWS G + E+
Sbjct: 152 VCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTEL 208
Query: 95 ATRK----PLFQGDSEIDQLFRIFRVLTTP 120
T+ P +DQ+ R +R+ P
Sbjct: 209 TTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+ KVADFGLAR + YT + + APE L R++ DVWS G + E+
Sbjct: 152 VCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTEL 208
Query: 95 ATRK----PLFQGDSEIDQLFRIFRVLTTP 120
T+ P +DQ+ R +R+ P
Sbjct: 209 TTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT- 96
+K+ DFG++ G + + V T Y +PE L G+ YS D+WS+G E+A
Sbjct: 144 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVG 199
Query: 97 RKPLFQGDSEIDQL--FRIFRVLTTPTEDNWPGVSKLPD--YKTTFPEWSNFCLDKH 149
R P+ D++ D IF +L + P KLP + F ++ N CL K+
Sbjct: 200 RYPIPPPDAKEDSRPPMAIFELLDYIVNEPPP---KLPSGVFSLEFQDFVNKCLIKN 253
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+ KVADFGLAR + YT + + APE L R++ DVWS G + E+
Sbjct: 152 VCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTEL 208
Query: 95 ATRK----PLFQGDSEIDQLFRIFRVLTTP 120
T+ P +DQ+ R +R+ P
Sbjct: 209 TTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 39 VKVADFGLARA---FGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
K++DFGLARA F V + V T Y APE L G + D++S G + EI
Sbjct: 166 AKISDFGLARASEKFAQXV-MXXRIVGTTAYMAPEALRG--EITPKSDIYSFGVVLLEII 222
Query: 96 TRKP 99
T P
Sbjct: 223 TGLP 226
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+ KVADFGLAR + YT + + APE L R++ DVWS G + E+
Sbjct: 152 VCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTEL 208
Query: 95 ATRK----PLFQGDSEIDQLFRIFRVLTTP 120
T+ P +DQ+ R +R+ P
Sbjct: 209 TTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+ KVADFGLAR + YT + + APE L R++ DVWS G + E+
Sbjct: 143 VCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTEL 199
Query: 95 ATRK----PLFQGDSEIDQLFRIFRVLTTP 120
T+ P +DQ+ R +R+ P
Sbjct: 200 TTKGRVPYPGMVNREVLDQVERGYRMPCPP 229
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+ KVADFGLAR + YT + + APE L R++ DVWS G + E+
Sbjct: 152 VCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTEL 208
Query: 95 ATRK----PLFQGDSEIDQLFRIFRVLTTP 120
T+ P +DQ+ R +R+ P
Sbjct: 209 TTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 15 YQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG 74
+ K+ R + F + K VK+ DFGL + + TL Y +PE +
Sbjct: 139 HSKKLINRDLKPSNIFLVDTKQ--VKIGDFGLVTSLKNDGK-RXRSKGTLRYMSPEQI-S 194
Query: 75 SQRYSCPVDVWSIGCIFAEI 94
SQ Y VD++++G I AE+
Sbjct: 195 SQDYGKEVDLYALGLILAEL 214
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPV 82
AT + N VK+ DFGL + E WY APE L S ++S
Sbjct: 145 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES-KFSVAS 202
Query: 83 DVWSIGCIFAEIAT 96
DVWS G + E+ T
Sbjct: 203 DVWSFGVVLYELFT 216
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+ KVADFGLAR + YT + + APE L R++ DVWS G + E+
Sbjct: 145 VCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTEL 201
Query: 95 ATRK----PLFQGDSEIDQLFRIFRVLTTP 120
T+ P +DQ+ R +R+ P
Sbjct: 202 TTKGRVPYPGMVNREVLDQVERGYRMPCPP 231
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPV 82
AT + N VK+ DFGL + E WY APE L S ++S
Sbjct: 144 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES-KFSVAS 201
Query: 83 DVWSIGCIFAEIAT 96
DVWS G + E+ T
Sbjct: 202 DVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPV 82
AT + N VK+ DFGL + E WY APE L S ++S
Sbjct: 141 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES-KFSVAS 198
Query: 83 DVWSIGCIFAEIAT 96
DVWS G + E+ T
Sbjct: 199 DVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPV 82
AT + N VK+ DFGL + E WY APE L S ++S
Sbjct: 140 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES-KFSVAS 197
Query: 83 DVWSIGCIFAEIAT 96
DVWS G + E+ T
Sbjct: 198 DVWSFGVVLYELFT 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPV 82
AT + N VK+ DFGL + E WY APE L S ++S
Sbjct: 144 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES-KFSVAS 201
Query: 83 DVWSIGCIFAEIAT 96
DVWS G + E+ T
Sbjct: 202 DVWSFGVVLYELFT 215
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL---------LGSQR 77
A C+ + VKVADFGLAR +Y E ++ + L L +Q+
Sbjct: 160 AARNCMLDEKFTVKVADFGLAR------DMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 213
Query: 78 YSCPVDVWSIGCIFAEIATR 97
++ DVWS G + E+ TR
Sbjct: 214 FTTKSDVWSFGVLLWELMTR 233
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL---------LGSQR 77
A C+ + VKVADFGLAR +Y E ++ + L L +Q+
Sbjct: 160 AARNCMLDEKFTVKVADFGLAR------DMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 213
Query: 78 YSCPVDVWSIGCIFAEIATR 97
++ DVWS G + E+ TR
Sbjct: 214 FTTKSDVWSFGVLLWELMTR 233
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+ KVADFGLAR + YT + + APE L R++ DVWS G + E+
Sbjct: 141 VCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTEL 197
Query: 95 ATRK----PLFQGDSEIDQLFRIFRVLTTP 120
T+ P +DQ+ R +R+ P
Sbjct: 198 TTKGRVPYPGMVNREVLDQVERGYRMPCPP 227
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPV 82
AT + N VK+ DFGL + E WY APE L S ++S
Sbjct: 141 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES-KFSVAS 198
Query: 83 DVWSIGCIFAEIAT 96
DVWS G + E+ T
Sbjct: 199 DVWSFGVVLYELFT 212
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL---------LGSQR 77
A C+ + VKVADFGLAR +Y E ++ + L L +Q+
Sbjct: 155 AARNCMLDEKFTVKVADFGLAR------DMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 208
Query: 78 YSCPVDVWSIGCIFAEIATR 97
++ DVWS G + E+ TR
Sbjct: 209 FTTKSDVWSFGVLLWELMTR 228
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPV 82
AT + N VK+ DFGL + E WY APE L S ++S
Sbjct: 139 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES-KFSVAS 196
Query: 83 DVWSIGCIFAEIAT 96
DVWS G + E+ T
Sbjct: 197 DVWSFGVVLYELFT 210
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPV 82
AT + N VK+ DFGL + E WY APE L S ++S
Sbjct: 147 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES-KFSVAS 204
Query: 83 DVWSIGCIFAEIAT 96
DVWS G + E+ T
Sbjct: 205 DVWSFGVVLYELFT 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPV 82
AT + N VK+ DFGL + E WY APE L S ++S
Sbjct: 146 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES-KFSVAS 203
Query: 83 DVWSIGCIFAEIAT 96
DVWS G + E+ T
Sbjct: 204 DVWSFGVVLYELFT 217
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL---------LGSQR 77
A C+ + VKVADFGLAR +Y E ++ + L L +Q+
Sbjct: 158 AARNCMLDEKFTVKVADFGLAR------DMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 211
Query: 78 YSCPVDVWSIGCIFAEIATR 97
++ DVWS G + E+ TR
Sbjct: 212 FTTKSDVWSFGVLLWELMTR 231
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPV 82
AT + N VK+ DFGL + E WY APE L S ++S
Sbjct: 144 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES-KFSVAS 201
Query: 83 DVWSIGCIFAEIAT 96
DVWS G + E+ T
Sbjct: 202 DVWSFGVVLYELFT 215
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL---------LGSQR 77
A C+ + VKVADFGLAR +Y E ++ + L L +Q+
Sbjct: 159 AARNCMLDEKFTVKVADFGLAR------DMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 212
Query: 78 YSCPVDVWSIGCIFAEIATR 97
++ DVWS G + E+ TR
Sbjct: 213 FTTKSDVWSFGVLLWELMTR 232
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPV 82
AT + N VK+ DFGL + E WY APE L S ++S
Sbjct: 172 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES-KFSVAS 229
Query: 83 DVWSIGCIFAEIAT 96
DVWS G + E+ T
Sbjct: 230 DVWSFGVVLYELFT 243
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPV 82
AT + N VK+ DFGL + E WY APE L S ++S
Sbjct: 159 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES-KFSVAS 216
Query: 83 DVWSIGCIFAEIAT 96
DVWS G + E+ T
Sbjct: 217 DVWSFGVVLYELFT 230
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 15/149 (10%)
Query: 7 LEWEQVGTYQVKITTRLFLQATSFCIK----------PKSNIVKVADFGLAR-AFGVPVR 55
L E + Y ++ + A+ CI + N+VK+ DFGLAR + P
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDX 204
Query: 56 IYTHEV-VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIF 114
+ + + L + APE + + Y+ DVWS G + EI + +ID+ F
Sbjct: 205 VRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--C 261
Query: 115 RVLTTPTEDNWPGVSKLPDYKTTFPEWSN 143
R L T P + Y+T W
Sbjct: 262 RRLKEGTRMRAPDYTTPEMYQTMLDCWHG 290
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL---------LGSQR 77
A C+ + VKVADFGLAR +Y E ++ + L L +Q+
Sbjct: 152 AARNCMLDEKFTVKVADFGLAR------DMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 205
Query: 78 YSCPVDVWSIGCIFAEIATR 97
++ DVWS G + E+ TR
Sbjct: 206 FTTKSDVWSFGVLLWELMTR 225
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL---------LGSQR 77
A C+ + VKVADFGLAR +Y E ++ + L L +Q+
Sbjct: 178 AARNCMLDEKFTVKVADFGLAR------DMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 231
Query: 78 YSCPVDVWSIGCIFAEIATR 97
++ DVWS G + E+ TR
Sbjct: 232 FTTKSDVWSFGVLLWELMTR 251
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPV 82
AT + N VK+ DFGL + E WY APE L S ++S
Sbjct: 148 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES-KFSVAS 205
Query: 83 DVWSIGCIFAEIAT 96
DVWS G + E+ T
Sbjct: 206 DVWSFGVVLYELFT 219
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 35.4 bits (80), Expect = 0.023, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 40 KVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
K++DFGL++A G YT W + APE + +++S DVWS G E
Sbjct: 476 KISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC-INFRKFSSRSDVWSYGVTMWE 531
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL---------LGSQR 77
A C+ + VKVADFGLAR +Y E ++ + L L +Q+
Sbjct: 179 AARNCMLDEKFTVKVADFGLAR------DMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 232
Query: 78 YSCPVDVWSIGCIFAEIATR 97
++ DVWS G + E+ TR
Sbjct: 233 FTTKSDVWSFGVLLWELMTR 252
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 39 VKVADFGLARA---FGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
K++DFGLARA F V + V T Y APE L G + D++S G + EI
Sbjct: 163 AKISDFGLARASEKFAQXVX-XSRIVGTTAYXAPEALRG--EITPKSDIYSFGVVLLEII 219
Query: 96 TRKP 99
T P
Sbjct: 220 TGLP 223
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 29/150 (19%)
Query: 41 VADFGLARAFGVPVRIYTHEV----VTLWYRAPEVLLGS--QRYSCPVDVWSIGCIFAEI 94
++DFGL + + + T +RAPE+L S +R + +D++S+GC+F I
Sbjct: 187 ISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYI 246
Query: 95 ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
++ GD + + I R G+ L + K CL H ++L
Sbjct: 247 LSKGKHPFGD-KYSRESNIIR-----------GIFSLDEMK---------CL--HDRSLI 283
Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ DL+ + + + P R A L+H F
Sbjct: 284 AEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 29/150 (19%)
Query: 41 VADFGLARAFGVPVRIYTHEV----VTLWYRAPEVLLGS--QRYSCPVDVWSIGCIFAEI 94
++DFGL + + + T +RAPE+L S +R + +D++S+GC+F I
Sbjct: 187 ISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYI 246
Query: 95 ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
++ GD + + I R G+ L + K CL H ++L
Sbjct: 247 LSKGKHPFGD-KYSRESNIIR-----------GIFSLDEMK---------CL--HDRSLI 283
Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ DL+ + + + P R A L+H F
Sbjct: 284 AEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL---------LGSQR 77
A C+ + VKVADFGLAR +Y E ++ + L L +Q+
Sbjct: 157 AARNCMLDEKFTVKVADFGLAR------DMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 210
Query: 78 YSCPVDVWSIGCIFAEIATR 97
++ DVWS G + E+ TR
Sbjct: 211 FTTKSDVWSFGVLLWELMTR 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPV 82
AT + N VK+ DFGL + E WY APE L S ++S
Sbjct: 159 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES-KFSVAS 216
Query: 83 DVWSIGCIFAEIAT 96
DVWS G + E+ T
Sbjct: 217 DVWSFGVVLYELFT 230
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVD 83
A C+ ++ ++KV+DFG+ R V YT T + + +PEV S RYS D
Sbjct: 133 AARNCLVGENQVIKVSDFGMTRF--VLDDQYTSSTGTKFPVKWASPEVFSFS-RYSSKSD 189
Query: 84 VWSIGCIFAEI 94
VWS G + E+
Sbjct: 190 VWSFGVLMWEV 200
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVD 83
A C+ ++ ++KV+DFG+ R V YT T + + +PEV S RYS D
Sbjct: 131 AARNCLVGENQVIKVSDFGMTRF--VLDDQYTSSTGTKFPVKWASPEVFSFS-RYSSKSD 187
Query: 84 VWSIGCIFAEI 94
VWS G + E+
Sbjct: 188 VWSFGVLMWEV 198
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVD 83
A C+ ++ ++KV+DFG+ R V YT T + + +PEV S RYS D
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRF--VLDDQYTSSTGTKFPVKWASPEVFSFS-RYSSKSD 186
Query: 84 VWSIGCIFAEI 94
VWS G + E+
Sbjct: 187 VWSFGVLMWEV 197
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVD 83
A C+ ++ ++KV+DFG+ R V YT T + + +PEV S RYS D
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRF--VLDDQYTSSTGTKFPVKWASPEVFSFS-RYSSKSD 186
Query: 84 VWSIGCIFAEI 94
VWS G + E+
Sbjct: 187 VWSFGVLMWEV 197
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P TL Y PE++ G + + VD+WS+G + E K
Sbjct: 150 LKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 206
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ ++ + RI RV + TFP++ + +
Sbjct: 207 PPFEANTYQETYKRISRV------------------EFTFPDF-----------VTEGAR 237
Query: 159 DLLEKTLIYCPATRINAENALKH 181
DL+ + L + P+ R L+H
Sbjct: 238 DLISRLLKHNPSQRPMLREVLEH 260
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVD 83
A C+ ++ ++KV+DFG+ R V YT T + + +PEV S RYS D
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRF--VLDDQYTSSTGTKFPVKWASPEVFSFS-RYSSKSD 184
Query: 84 VWSIGCIFAEI 94
VWS G + E+
Sbjct: 185 VWSFGVLMWEV 195
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVD 83
A C+ ++ ++KV+DFG+ R V YT T + + +PEV S RYS D
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRF--VLDDQYTSSTGTKFPVKWASPEVFSFS-RYSSKSD 206
Query: 84 VWSIGCIFAEI 94
VWS G + E+
Sbjct: 207 VWSFGVLMWEV 217
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 35 KSNIVKVADFGLAR-AFGVPVRIYTHEV-VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
++N+VK+ DFGLAR + P + + + L + APE + + YS DVWS G +
Sbjct: 234 ENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIF-DKIYSTKSDVWSYGVLLW 292
Query: 93 EI 94
EI
Sbjct: 293 EI 294
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 13/115 (11%)
Query: 35 KSNIVKVADFGLAR-AFGVPVRIYTHEV-VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
+ N+VK+ DFGLAR + P + + + L + APE + + Y+ DVWS G +
Sbjct: 179 EKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLW 237
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD 147
EI + +ID+ F R L T + PDY T PE LD
Sbjct: 238 EIFSLGASPYPGVKIDEEF--XRRLKEGTR------MRAPDYTT--PEMYQTMLD 282
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 15/149 (10%)
Query: 7 LEWEQVGTYQVKITTRLFLQATSFCIK----------PKSNIVKVADFGLAR-AFGVPVR 55
L E + Y ++ + A+ CI + N+VK+ DFGLAR + P
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
Query: 56 IYTHEV-VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIF 114
+ + + L + APE + + Y+ DVWS G + EI + +ID+ F
Sbjct: 196 VRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--C 252
Query: 115 RVLTTPTEDNWPGVSKLPDYKTTFPEWSN 143
R L T P + Y+T W
Sbjct: 253 RRLKEGTRMRAPDYTTPEMYQTMLDCWHG 281
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 15/149 (10%)
Query: 7 LEWEQVGTYQVKITTRLFLQATSFCIK----------PKSNIVKVADFGLAR-AFGVPVR 55
L E + Y ++ + A+ CI + N+VK+ DFGLAR + P
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 204
Query: 56 IYTHEV-VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIF 114
+ + + L + APE + + Y+ DVWS G + EI + +ID+ F
Sbjct: 205 VRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--C 261
Query: 115 RVLTTPTEDNWPGVSKLPDYKTTFPEWSN 143
R L T P + Y+T W
Sbjct: 262 RRLKEGTRMRAPDYTTPEMYQTMLDCWHG 290
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 35/154 (22%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV----DVWSIGCI 90
+SN +K+ DFGL A P + T + APEV G PV D+WS+G +
Sbjct: 292 RSNELKLIDFGLT-AHLDPKQSVKVTTGTAEFAAPEVAEGK-----PVGYYTDMWSVGVL 345
Query: 91 FAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV 150
+ + F G+++ D+ R + +W+ D
Sbjct: 346 SYILLSGLSPFGGEND-DETLRNVKSC----------------------DWN--MDDSAF 380
Query: 151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
+ +DG D + K L+ P TR+ AL+H +
Sbjct: 381 SGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+ KVADFGL R + YT + + APE L R++ DVWS G + E+
Sbjct: 319 VCKVADFGLGRL--IEDNEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTEL 375
Query: 95 ATRK----PLFQGDSEIDQLFRIFRVLTTP 120
T+ P +DQ+ R +R+ P
Sbjct: 376 TTKGRVPYPGMVNREVLDQVERGYRMPCPP 405
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 29/155 (18%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
VK+ADFG+A V T ++ APEV+ S Y D+WS+G E+A +
Sbjct: 155 VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSA-YDFKADIWSLGITAIELAKGE 213
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P +S++ + RVL +++ P + + F E+ CL+K
Sbjct: 214 P---PNSDLHPM----RVLFLIPKNSPPTLEG--QHSKPFKEFVEACLNKD--------- 255
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLPKF 193
P R A+ LKHK+ T F
Sbjct: 256 ----------PRFRPTAKELLKHKFITRYTKKTSF 280
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL---------LGSQR 77
A C+ + VKVADFGLAR +Y E ++ + L L +Q+
Sbjct: 161 AARNCMLDEKFTVKVADFGLAR------DMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 214
Query: 78 YSCPVDVWSIGCIFAEIATR 97
++ DVWS G + E+ TR
Sbjct: 215 FTTKSDVWSFGVLLWELMTR 234
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 35/151 (23%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV----DVWSIGCI 90
+SN +K+ DFGL A P + T + APEV G PV D+WS+G +
Sbjct: 186 RSNELKLIDFGLT-AHLDPKQSVKVTTGTAEFAAPEVAEGK-----PVGYYTDMWSVGVL 239
Query: 91 FAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV 150
+ + F G+++ D+ R + +W+ D
Sbjct: 240 SYILLSGLSPFGGEND-DETLRNVKSC----------------------DWN--MDDSAF 274
Query: 151 KNLDQDGLDLLEKTLIYCPATRINAENALKH 181
+ +DG D + K L+ P TR+ AL+H
Sbjct: 275 SGISEDGKDFIRKLLLADPNTRMTIHQALEH 305
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 15/149 (10%)
Query: 7 LEWEQVGTYQVKITTRLFLQATSFCIK----------PKSNIVKVADFGLAR-AFGVPVR 55
L E + Y ++ + A+ CI + N+VK+ DFGLAR + P
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 206
Query: 56 IYTHEV-VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIF 114
+ + + L + APE + + Y+ DVWS G + EI + +ID+ F
Sbjct: 207 VRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--C 263
Query: 115 RVLTTPTEDNWPGVSKLPDYKTTFPEWSN 143
R L T P + Y+T W
Sbjct: 264 RRLKEGTRMRAPDYTTPEMYQTMLDCWHG 292
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVT-------LWYRAPEVLLGSQRYSCPVDVWSIGCI 90
+ KVADFGLAR I +E + + APE L R++ DVWS G +
Sbjct: 142 VCKVADFGLARL------IEDNEXTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGIL 194
Query: 91 FAEIATRK----PLFQGDSEIDQLFRIFRVLTTP 120
E+ T+ P +DQ+ R +R+ P
Sbjct: 195 LTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 228
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL---------LGSQR 77
A C+ + VKVADFGLAR +Y E ++ + L L +Q+
Sbjct: 158 AARNCMLDEKFTVKVADFGLAR------DMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 211
Query: 78 YSCPVDVWSIGCIFAEIATR 97
++ DVWS G + E+ TR
Sbjct: 212 FTTKSDVWSFGVLLWELMTR 231
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVT-------LWYRAPEVLLGSQRYSCPVDVWSIGCI 90
+ KVADFGLAR I +E + + APE L R++ DVWS G +
Sbjct: 152 VCKVADFGLARL------IEDNEXTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGIL 204
Query: 91 FAEIATRK----PLFQGDSEIDQLFRIFRVLTTP 120
E+ T+ P +DQ+ R +R+ P
Sbjct: 205 LTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL---------LGSQR 77
A C+ + VKVADFGLAR +Y E ++ + L L +Q+
Sbjct: 160 AARNCMLDEKFTVKVADFGLAR------DMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 213
Query: 78 YSCPVDVWSIGCIFAEIATR 97
++ DVWS G + E+ TR
Sbjct: 214 FTTKSDVWSFGVLLWELMTR 233
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 15/149 (10%)
Query: 7 LEWEQVGTYQVKITTRLFLQATSFCIK----------PKSNIVKVADFGLAR-AFGVPVR 55
L E + Y ++ + A+ CI + N+VK+ DFGLAR + P
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
Query: 56 IYTHEV-VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIF 114
+ + + L + APE + + Y+ DVWS G + EI + +ID+ F
Sbjct: 248 VRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--C 304
Query: 115 RVLTTPTEDNWPGVSKLPDYKTTFPEWSN 143
R L T P + Y+T W
Sbjct: 305 RRLKEGTRMRAPDYTTPEMYQTMLDCWHG 333
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL---------LGSQR 77
A C+ + VKVADFGLAR +Y E ++ + L L +Q+
Sbjct: 160 AARNCMLDEKFTVKVADFGLAR------DMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 213
Query: 78 YSCPVDVWSIGCIFAEIATR 97
++ DVWS G + E+ TR
Sbjct: 214 FTTKSDVWSFGVLLWELMTR 233
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 34.7 bits (78), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL---------LGSQR 77
A C+ + VKVADFGLAR +Y E ++ + L L +Q+
Sbjct: 165 AARNCMLDEKFTVKVADFGLAR------DMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 218
Query: 78 YSCPVDVWSIGCIFAEIATR 97
++ DVWS G + E+ TR
Sbjct: 219 FTTKSDVWSFGVLLWELMTR 238
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 34.7 bits (78), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 58/170 (34%), Gaps = 44/170 (25%)
Query: 22 RLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCP 81
+L L C KPK N D+ L G +L Y APE++ G
Sbjct: 146 KLKLIDFGLCAKPKGN----KDYHLQTCCG-----------SLAYAAPELIQGKSYLGSE 190
Query: 82 VDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW 141
DVWS+G + + F D+ + +I R K P+W
Sbjct: 191 ADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRG------------------KYDVPKW 232
Query: 142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
L + LL++ L P RI+ +N L H + + P
Sbjct: 233 -----------LSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYP 271
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 34.7 bits (78), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 15/149 (10%)
Query: 7 LEWEQVGTYQVKITTRLFLQATSFCIK----------PKSNIVKVADFGLAR-AFGVPVR 55
L E + Y ++ + A+ CI + N+VK+ DFGLAR + P
Sbjct: 182 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 241
Query: 56 IYTHEV-VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIF 114
+ + + L + APE + + Y+ DVWS G + EI + +ID+ F
Sbjct: 242 VRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--C 298
Query: 115 RVLTTPTEDNWPGVSKLPDYKTTFPEWSN 143
R L T P + Y+T W
Sbjct: 299 RRLKEGTRMRAPDYTTPEMYQTMLDCWHG 327
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 34.7 bits (78), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 15/149 (10%)
Query: 7 LEWEQVGTYQVKITTRLFLQATSFCIK----------PKSNIVKVADFGLAR-AFGVPVR 55
L E + Y ++ + A+ CI + N+VK+ DFGLAR + P
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
Query: 56 IYTHEV-VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIF 114
+ + + L + APE + + Y+ DVWS G + EI + +ID+ F
Sbjct: 250 VRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--C 306
Query: 115 RVLTTPTEDNWPGVSKLPDYKTTFPEWSN 143
R L T P + Y+T W
Sbjct: 307 RRLKEGTRMRAPDYTTPEMYQTMLDCWHG 335
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 39 VKVADFGLAR-AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
+K+ DFGL++ A + Y+ T+ Y APEV+ Q +S D WS G + E+ T
Sbjct: 169 IKLTDFGLSKEAIDHEKKAYSF-CGTVEYMAPEVV-NRQGHSHSADWWSYGVLMFEMLTG 226
Query: 98 KPLFQGDSEIDQLFRIFRV 116
FQG + + I +
Sbjct: 227 SLPFQGKDRKETMTLILKA 245
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 15/149 (10%)
Query: 7 LEWEQVGTYQVKITTRLFLQATSFCIK----------PKSNIVKVADFGLAR-AFGVPVR 55
L E + Y ++ + A+ CI + N+VK+ DFGLAR + P
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
Query: 56 IYTHEV-VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIF 114
+ + + L + APE + + Y+ DVWS G + EI + +ID+ F
Sbjct: 196 VRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--C 252
Query: 115 RVLTTPTEDNWPGVSKLPDYKTTFPEWSN 143
R L T P + Y+T W
Sbjct: 253 RRLKEGTRMRAPDYTTPEMYQTMLDCWHG 281
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 34.7 bits (78), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 23/153 (15%)
Query: 7 LEWEQVGTYQVKITTRLFLQATSFCIK----------PKSNIVKVADFGLAR-AFGVPVR 55
L E + Y ++ + A+ CI + N+VK+ DFGLAR + P
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
Query: 56 IYTHEV-VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIF 114
+ + + L + APE + + Y+ DVWS G + EI + +ID+ F
Sbjct: 257 VRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--C 313
Query: 115 RVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD 147
R L T + PDY T PE LD
Sbjct: 314 RRLKEGTR------MRAPDYTT--PEMYQTMLD 338
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 34.7 bits (78), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 15/149 (10%)
Query: 7 LEWEQVGTYQVKITTRLFLQATSFCIK----------PKSNIVKVADFGLAR-AFGVPVR 55
L E + Y ++ + A+ CI + N+VK+ DFGLAR + P
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
Query: 56 IYTHEV-VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIF 114
+ + + L + APE + + Y+ DVWS G + EI + +ID+ F
Sbjct: 255 VRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--C 311
Query: 115 RVLTTPTEDNWPGVSKLPDYKTTFPEWSN 143
R L T P + Y+T W
Sbjct: 312 RRLKEGTRMRAPDYTTPEMYQTMLDCWHG 340
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 34.7 bits (78), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 60/148 (40%), Gaps = 28/148 (18%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG ++A + + + V T Y APEVLL + DVWS G +
Sbjct: 156 LKIADFGYSKASVLHSQPKS-AVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGA 214
Query: 99 PLFQGDSEIDQLFR--IFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQD 156
F+ D E + FR I R+L +PDY PE +
Sbjct: 215 YPFE-DPEEPKNFRKTIHRILNVQY--------AIPDYVHISPECRH------------- 252
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYF 184
L+ + + PA RI+ H++F
Sbjct: 253 ---LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL---------LGSQR 77
A C+ + VKVADFGLAR +Y E ++ + L L +Q+
Sbjct: 219 AARNCMLDEKFTVKVADFGLAR------DMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 272
Query: 78 YSCPVDVWSIGCIFAEIATR 97
++ DVWS G + E+ TR
Sbjct: 273 FTTKSDVWSFGVLLWELMTR 292
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 32 IKPKSNIVKVADFGLARAFGVPVRIYTHE-------VVTLWYRAPEVLLGSQRYSCPVDV 84
+KP++ +V DF FG+ + V TL+Y APE S + D+
Sbjct: 160 VKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESH-ATYRADI 218
Query: 85 WSIGCIFAEIATRKPLFQGD 104
+++ C+ E T P +QGD
Sbjct: 219 YALTCVLYECLTGSPPYQGD 238
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 15/149 (10%)
Query: 7 LEWEQVGTYQVKITTRLFLQATSFCIK----------PKSNIVKVADFGLARAFGV-PVR 55
L E + Y ++ + A+ CI + N+VK+ DFGLAR P
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 56 IYTHEV-VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIF 114
+ + + L + APE + + Y+ DVWS G + EI + +ID+ F
Sbjct: 205 VRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--C 261
Query: 115 RVLTTPTEDNWPGVSKLPDYKTTFPEWSN 143
R L T P + Y+T W
Sbjct: 262 RRLKEGTRMRAPDYTTPEMYQTMLDCWHG 290
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 34.3 bits (77), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
K++DFGL++A G YT W + APE + +++S DVWS G E
Sbjct: 149 AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC-INFRKFSSRSDVWSYGVTMWE 205
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 34.3 bits (77), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 15/149 (10%)
Query: 7 LEWEQVGTYQVKITTRLFLQATSFCIK----------PKSNIVKVADFGLARAFGV-PVR 55
L E + Y ++ + A+ CI + N+VK+ DFGLAR P
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 56 IYTHEV-VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIF 114
+ + + L + APE + + Y+ DVWS G + EI + +ID+ F
Sbjct: 205 VRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--C 261
Query: 115 RVLTTPTEDNWPGVSKLPDYKTTFPEWSN 143
R L T P + Y+T W
Sbjct: 262 RRLKEGTRMRAPDYTTPEMYQTMLDCWHG 290
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 34.3 bits (77), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 30 FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
+ K + I+K+ DFG A+ + T T +Y APEVL G ++Y D WS+G
Sbjct: 194 YTSKRPNAILKLTDFGFAKETTSHNSLTT-PCYTPYYVAPEVL-GPEKYDKSCDXWSLGV 251
Query: 90 I 90
I
Sbjct: 252 I 252
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 34.3 bits (77), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 15/149 (10%)
Query: 7 LEWEQVGTYQVKITTRLFLQATSFCIK----------PKSNIVKVADFGLARAFGV-PVR 55
L E + Y ++ + A+ CI + N+VK+ DFGLAR P
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 195
Query: 56 IYTHEV-VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIF 114
+ + + L + APE + + Y+ DVWS G + EI + +ID+ F
Sbjct: 196 VRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--C 252
Query: 115 RVLTTPTEDNWPGVSKLPDYKTTFPEWSN 143
R L T P + Y+T W
Sbjct: 253 RRLKEGTRMRAPDYTTPEMYQTMLDCWHG 281
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 34.3 bits (77), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 15/149 (10%)
Query: 7 LEWEQVGTYQVKITTRLFLQATSFCIK----------PKSNIVKVADFGLARAFGV-PVR 55
L E + Y ++ + A+ CI + N+VK+ DFGLAR P
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 195
Query: 56 IYTHEV-VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIF 114
+ + + L + APE + + Y+ DVWS G + EI + +ID+ F
Sbjct: 196 VRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--C 252
Query: 115 RVLTTPTEDNWPGVSKLPDYKTTFPEWSN 143
R L T P + Y+T W
Sbjct: 253 RRLKEGTRMRAPDYTTPEMYQTMLDCWHG 281
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 34.3 bits (77), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 57/158 (36%), Gaps = 29/158 (18%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR- 97
+++ DFG A+ + T + APEVL Q Y D+WS+G + + T
Sbjct: 159 IRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL-ERQGYDAACDIWSLGVLLYTMLTGY 217
Query: 98 KPLFQG--DSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
P G D+ + L RI + + W VS
Sbjct: 218 TPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK---------------------- 255
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF 193
DL+ K L P R+ A L+H + LP++
Sbjct: 256 ---DLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQY 290
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 22/79 (27%)
Query: 27 ATSFCIKPKSNIVKVADFGL-----------ARAFGVPVRIYTHEVVTLWYRAPEVLLGS 75
A C+ +VKV+DFGL +R PVR + PEVL+ S
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR----------WSPPEVLMYS 181
Query: 76 QRYSCPVDVWSIGCIFAEI 94
++S D+W+ G + EI
Sbjct: 182 -KFSSKSDIWAFGVLMWEI 199
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P T TL Y PE++ G + + VD+WS+G + E
Sbjct: 151 LKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGM 207
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ + + RI RV + TFP++ + +
Sbjct: 208 PPFEAHTYQETYRRISRV------------------EFTFPDF-----------VTEGAR 238
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + + R+ L+H + + P
Sbjct: 239 DLISRLLKHNASQRLTLAEVLEHPWIKANSSKP 271
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 18/90 (20%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVT-------LWYRAPEVLLGSQRYSCPVDVWSIGCI 90
I K+ADFGLAR I +E + + APE L R++ DVWS G +
Sbjct: 143 ICKIADFGLARL------IEDNEXTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGIL 195
Query: 91 FAEIATRK----PLFQGDSEIDQLFRIFRV 116
E+ T+ P ++Q+ R +R+
Sbjct: 196 LTELVTKGRVPYPGMNNREVLEQVERGYRM 225
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 13/115 (11%)
Query: 35 KSNIVKVADFGLAR-AFGVPVRIYTHEV-VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
+ N+VK+ DFGLAR + P + + + L + APE + + Y+ DVWS G +
Sbjct: 179 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLW 237
Query: 93 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD 147
EI + +ID+ F R L T + PDY T PE LD
Sbjct: 238 EIFSLGASPYPGVKIDEEF--CRRLKEGTR------MRAPDYTT--PEMYQTMLD 282
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 34.3 bits (77), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 22/79 (27%)
Query: 27 ATSFCIKPKSNIVKVADFGLAR-----------AFGVPVRIYTHEVVTLWYRAPEVLLGS 75
A C+ +VKV+DFGL+R PVR + PEVL+ S
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR----------WSPPEVLMYS 196
Query: 76 QRYSCPVDVWSIGCIFAEI 94
++S D+W+ G + EI
Sbjct: 197 -KFSSKSDIWAFGVLMWEI 214
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 33.9 bits (76), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVT-------LWYRAPEVLLGSQRYSCPVDVWSIGCI 90
+ KVADFGLAR I +E + + APE L R++ DVWS G +
Sbjct: 149 VCKVADFGLARL------IEDNEWTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGIL 201
Query: 91 FAEIATRK----PLFQGDSEIDQLFRIFRVLTTP 120
E+ T+ P +DQ+ R +R+ P
Sbjct: 202 LTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 235
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 33.9 bits (76), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 36 SNIVKVADFGLARAFG-VPVRIYTHEVVTLWYRAPEVL-LGSQRYSCPVDVWSIGCIFAE 93
S + K+ADFGLAR P++ + APE + GS ++ DVWS G + E
Sbjct: 314 SLVCKIADFGLARVGAKFPIK----------WTAPEAINFGS--FTIKSDVWSFGILLME 361
Query: 94 IAT--RKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 126
I T R P + G S + + + R P +N P
Sbjct: 362 IVTYGRIP-YPGMSNPEVIRALERGYRMPRPENCP 395
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 33.9 bits (76), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 57/158 (36%), Gaps = 29/158 (18%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC-IFAEIATR 97
+++ DFG A+ + T + APEVL Q Y D+WS+G ++ +
Sbjct: 159 IRICDFGFAKQLRAENGLLXTPCYTANFVAPEVL-ERQGYDAACDIWSLGVLLYTXLTGY 217
Query: 98 KPLFQG--DSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
P G D+ + L RI + + W VS
Sbjct: 218 TPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK---------------------- 255
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF 193
DL+ K L P R+ A L+H + LP++
Sbjct: 256 ---DLVSKXLHVDPHQRLTAALVLRHPWIVHWDQLPQY 290
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAF----GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
A C+ + VKVADFGLAR V T + + + A E L +Q+++
Sbjct: 161 AARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES-LQTQKFTTKS 219
Query: 83 DVWSIGCIFAEIATR 97
DVWS G + E+ TR
Sbjct: 220 DVWSFGVLLWELMTR 234
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 33.9 bits (76), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 35 KSNIVKVADFGLARAFGV-PVRIYTHEV-VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
+ N+VK+ DFGLAR P + + + L + APE + + Y+ DVWS G +
Sbjct: 183 EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLW 241
Query: 93 EI 94
EI
Sbjct: 242 EI 243
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 33/156 (21%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVV----TLWYRAPEVLLGS------QRYSCPVDVWSIG 88
+ ++DFGL + + + T +RAPE+L S +R + +D++S+G
Sbjct: 167 ILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG 226
Query: 89 CIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK 148
C+F I ++ GD + + I R G+ L + K CL
Sbjct: 227 CVFYYILSKGKHPFGD-KYSRESNIIR-----------GIFSLDEMK---------CL-- 263
Query: 149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
H ++L + DL+ + + + P R A L+H F
Sbjct: 264 HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 33.5 bits (75), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 73/190 (38%), Gaps = 50/190 (26%)
Query: 22 RLF---LQATSFC---------IKPKSNIV------KVADFGLARAFGVPVRIYTHEVVT 63
RLF L A +C +KP++ ++ K+ADFGL+ + T +
Sbjct: 115 RLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT-SCGS 173
Query: 64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
Y APEV+ G VD+WS G I + F D + LF+ R
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD-DEHVPTLFKKIR-------- 224
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
GV +P+Y L++ LL L P R ++ +H++
Sbjct: 225 --GGVFYIPEY------------------LNRSVATLLMHMLQVDPLKRATIKDIREHEW 264
Query: 184 FADKTDLPKF 193
F K DLP +
Sbjct: 265 F--KQDLPSY 272
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 33.5 bits (75), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 38/163 (23%)
Query: 38 IVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL--LGSQRYSCPV--------DVW 85
++K+ DFG+A + +V T+ Y PE + + S R + DVW
Sbjct: 148 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 207
Query: 86 SIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC 145
S+GCI + K FQ I+Q+ ++ ++ P+++ FP+
Sbjct: 208 SLGCILYYMTYGKTPFQ--QIINQISKLHAIID-------------PNHEIEFPDIP--- 249
Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
++D D+L+ L P RI+ L H Y +T
Sbjct: 250 --------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 284
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 33.5 bits (75), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 29/147 (19%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K++DFG V V T ++ APEV+ Y VD+WS+G + E+ +
Sbjct: 180 IKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVI-SRLPYGTEVDIWSLGIMVIEMIDGE 238
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH-VKNLDQDG 157
P + + + + RI D+ P P K D H V ++ +
Sbjct: 239 PPYFNEPPLQAMRRI--------RDSLP-----PRVK-----------DLHKVSSVLRGF 274
Query: 158 LDLLEKTLIYCPATRINAENALKHKYF 184
LDL+ L+ P+ R A+ L H +
Sbjct: 275 LDLM---LVREPSQRATAQELLGHPFL 298
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 33.5 bits (75), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 38/163 (23%)
Query: 38 IVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL--LGSQRYSCPV--------DVW 85
++K+ DFG+A + +V T+ Y PE + + S R + DVW
Sbjct: 144 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 203
Query: 86 SIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC 145
S+GCI + K FQ I+Q+ ++ ++ P+++ FP+
Sbjct: 204 SLGCILYYMTYGKTPFQ--QIINQISKLHAIID-------------PNHEIEFPDIP--- 245
Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
++D D+L+ L P RI+ L H Y +T
Sbjct: 246 --------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 280
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 33.5 bits (75), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 38/163 (23%)
Query: 38 IVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL--LGSQRYSCPV--------DVW 85
++K+ DFG+A + +V T+ Y PE + + S R + DVW
Sbjct: 145 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 204
Query: 86 SIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC 145
S+GCI + K FQ I+Q+ ++ ++ P+++ FP+
Sbjct: 205 SLGCILYYMTYGKTPFQ--QIINQISKLHAIID-------------PNHEIEFPDIP--- 246
Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
++D D+L+ L P RI+ L H Y +T
Sbjct: 247 --------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 281
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 33.5 bits (75), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 8/119 (6%)
Query: 14 TYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL 73
+ Q K L+ + + ++K+ DFG A + + ++ W APEV
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA--CDIQTHMTNNKGSAAWM-APEVFE 176
Query: 74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
GS YS DV+S G I E+ TR+ F D FRI + T P + LP
Sbjct: 177 GSN-YSEKCDVFSWGIILWEVITRRKPF--DEIGGPAFRIMWAVHNGTRP--PLIKNLP 230
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 33.5 bits (75), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 16/87 (18%)
Query: 25 LQATSFCIKPKSNIVKVADFGLA-------------RAFGVPVRIYTHEVV-TLWYRAPE 70
L + + ++ N+V VADFGLA R+ P R + VV ++ APE
Sbjct: 134 LNSHNCLVRENKNVV-VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 71 VLLGSQRYSCPVDVWSIGCIFAEIATR 97
++ G + Y VDV+S G + EI R
Sbjct: 193 MING-RSYDEKVDVFSFGIVLCEIIGR 218
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 33.5 bits (75), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 25/118 (21%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT- 96
+K+ DFG++ G + +E V T Y +PE L G+ YS D+WS+G E+A
Sbjct: 147 IKLCDFGVS---GQLIDEMANEFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVG 202
Query: 97 ---RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD--YKTTFPEWSNFCLDKH 149
R P+ IF +L + P KLP + F ++ N CL K+
Sbjct: 203 RYPRPPM-----------AIFELLDYIVNEPPP---KLPSAVFSLEFQDFVNKCLIKN 246
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 33.5 bits (75), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 38/163 (23%)
Query: 38 IVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL--LGSQRYSCPV--------DVW 85
++K+ DFG+A + +V T+ Y PE + + S R + DVW
Sbjct: 164 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 223
Query: 86 SIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC 145
S+GCI + K FQ I+Q+ ++ ++ P+++ FP+
Sbjct: 224 SLGCILYYMTYGKTPFQ--QIINQISKLHAIID-------------PNHEIEFPDIP--- 265
Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
++D D+L+ L P RI+ L H Y +T
Sbjct: 266 --------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 300
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 33.1 bits (74), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
+++ DFG A+ + V T Y +PE LL + S D+W++GCI ++
Sbjct: 171 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPE-LLTEKSASKSSDLWALGCIIYQLVA 229
Query: 97 RKPLFQGDSE 106
P F+ +E
Sbjct: 230 GLPPFRAGNE 239
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 33.1 bits (74), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 38/163 (23%)
Query: 38 IVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL--LGSQRYSCPV--------DVW 85
++K+ DFG+A + +V T+ Y PE + + S R + DVW
Sbjct: 192 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 251
Query: 86 SIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC 145
S+GCI + K FQ I+Q+ ++ ++ P+++ FP+
Sbjct: 252 SLGCILYYMTYGKTPFQ--QIINQISKLHAIID-------------PNHEIEFPDIP--- 293
Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
++D D+L+ L P RI+ L H Y +T
Sbjct: 294 --------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 328
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 33.1 bits (74), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSC-PVDVWSIGCIFAEIA 95
+++ DFG A+ + V T Y +PE+L +++ +C D+W++GCI ++
Sbjct: 169 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--TEKSACKSSDLWALGCIIYQLV 226
Query: 96 TRKPLFQGDSE 106
P F+ +E
Sbjct: 227 AGLPPFRAGNE 237
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 33.1 bits (74), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 38/163 (23%)
Query: 38 IVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL--LGSQRYSCPV--------DVW 85
++K+ DFG+A + +V T+ Y PE + + S R + DVW
Sbjct: 164 MLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 223
Query: 86 SIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC 145
S+GCI + K FQ I+Q+ ++ ++ P+++ FP+
Sbjct: 224 SLGCILYYMTYGKTPFQ--QIINQISKLHAIID-------------PNHEIEFPDIP--- 265
Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
++D D+L+ L P RI+ L H Y +T
Sbjct: 266 --------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 300
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 33.1 bits (74), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSC-PVDVWSIGCIFAEIA 95
+++ DFG A+ + V T Y +PE+L +++ +C D+W++GCI ++
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--TEKSACKSSDLWALGCIIYQLV 228
Query: 96 TRKPLFQGDSE 106
P F+ +E
Sbjct: 229 AGLPPFRAGNE 239
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 33.1 bits (74), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 8/119 (6%)
Query: 14 TYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL 73
+ Q K L+ + + ++K+ DFG A + + ++ W APEV
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA--CDIQTHMTNNKGSAAWM-APEVFE 177
Query: 74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
GS YS DV+S G I E+ TR+ F D FRI + T P + LP
Sbjct: 178 GSN-YSEKCDVFSWGIILWEVITRRKPF--DEIGGPAFRIMWAVHNGTRP--PLIKNLP 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 33.1 bits (74), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSC-PVDVWSIGCIFAEIA 95
+++ DFG A+ + V T Y +PE+L +++ +C D+W++GCI ++
Sbjct: 169 IQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL--TEKSACKSSDLWALGCIIYQLV 226
Query: 96 TRKPLFQGDSE 106
P F+ +E
Sbjct: 227 AGLPPFRAGNE 237
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 33.1 bits (74), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSC-PVDVWSIGCIFAEIA 95
+++ DFG A+ + V T Y +PE+L +++ +C D+W++GCI ++
Sbjct: 168 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--TEKSACKSSDLWALGCIIYQLV 225
Query: 96 TRKPLFQGDSE 106
P F+ +E
Sbjct: 226 AGLPPFRAGNE 236
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 33.1 bits (74), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSC-PVDVWSIGCIFAEIA 95
+++ DFG A+ + V T Y +PE+L +++ +C D+W++GCI ++
Sbjct: 168 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL--TEKSACKSSDLWALGCIIYQLV 225
Query: 96 TRKPLFQGDSE 106
P F+ +E
Sbjct: 226 AGLPPFRAGNE 236
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 33.1 bits (74), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 38/163 (23%)
Query: 38 IVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL--LGSQRYSCPV--------DVW 85
++K+ DFG+A + +V T+ Y PE + + S R + DVW
Sbjct: 192 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 251
Query: 86 SIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC 145
S+GCI + K FQ I+Q+ ++ ++ P+++ FP+
Sbjct: 252 SLGCILYYMTYGKTPFQ--QIINQISKLHAIID-------------PNHEIEFPDIP--- 293
Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
++D D+L+ L P RI+ L H Y +T
Sbjct: 294 --------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 328
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 33.1 bits (74), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSC-PVDVWSIGCIFAEIA 95
+++ DFG A+ + V T Y +PE+L +++ +C D+W++GCI ++
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--TEKSACKSSDLWALGCIIYQLV 228
Query: 96 TRKPLFQGDSE 106
P F+ +E
Sbjct: 229 AGLPPFRAGNE 239
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 33.1 bits (74), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSC-PVDVWSIGCIFAEIA 95
+++ DFG A+ + V T Y +PE+L +++ +C D+W++GCI ++
Sbjct: 153 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--TEKSACKSSDLWALGCIIYQLV 210
Query: 96 TRKPLFQGDSE 106
P F+ +E
Sbjct: 211 AGLPPFRAGNE 221
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 33.1 bits (74), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSC-PVDVWSIGCIFAEIA 95
+++ DFG A+ + V T Y +PE+L +++ +C D+W++GCI ++
Sbjct: 176 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--TEKSACKSSDLWALGCIIYQLV 233
Query: 96 TRKPLFQGDSE 106
P F+ +E
Sbjct: 234 AGLPPFRAGNE 244
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 33.1 bits (74), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSC-PVDVWSIGCIFAEIA 95
+++ DFG A+ + V T Y +PE+L +++ +C D+W++GCI ++
Sbjct: 169 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--TEKSACKSSDLWALGCIIYQLV 226
Query: 96 TRKPLFQGDSE 106
P F+ +E
Sbjct: 227 AGLPPFRAGNE 237
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 33.1 bits (74), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSC-PVDVWSIGCIFAEIA 95
+++ DFG A+ + V T Y +PE+L +++ +C D+W++GCI ++
Sbjct: 149 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--TEKSACKSSDLWALGCIIYQLV 206
Query: 96 TRKPLFQGDSE 106
P F+ +E
Sbjct: 207 AGLPPFRAGNE 217
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 33.1 bits (74), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSC-PVDVWSIGCIFAEIA 95
+++ DFG A+ + V T Y +PE+L +++ +C D+W++GCI ++
Sbjct: 169 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--TEKSACKSSDLWALGCIIYQLV 226
Query: 96 TRKPLFQGDSE 106
P F+ +E
Sbjct: 227 AGLPPFRAGNE 237
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 33.1 bits (74), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSC-PVDVWSIGCIFAEIA 95
+++ DFG A+ + V T Y +PE+L +++ +C D+W++GCI ++
Sbjct: 147 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--TEKSACKSSDLWALGCIIYQLV 204
Query: 96 TRKPLFQGDSE 106
P F+ +E
Sbjct: 205 AGLPPFRAGNE 215
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 33.1 bits (74), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSC-PVDVWSIGCIFAEIA 95
+++ DFG A+ + V T Y +PE+L +++ +C D+W++GCI ++
Sbjct: 172 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL--TEKSACKSSDLWALGCIIYQLV 229
Query: 96 TRKPLFQGDSE 106
P F+ +E
Sbjct: 230 AGLPPFRAGNE 240
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSC-PVDVWSIGCIFAEIA 95
+++ DFG A+ + V T Y +PE+L +++ +C D+W++GCI ++
Sbjct: 148 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--TEKSACKSSDLWALGCIIYQLV 205
Query: 96 TRKPLFQGDSE 106
P F+ +E
Sbjct: 206 AGLPPFRAGNE 216
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSC-PVDVWSIGCIFAEIA 95
+++ DFG A+ + V T Y +PE+L +++ +C D+W++GCI ++
Sbjct: 172 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--TEKSACKSSDLWALGCIIYQLV 229
Query: 96 TRKPLFQGDSE 106
P F+ +E
Sbjct: 230 AGLPPFRAGNE 240
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSC-PVDVWSIGCIFAEIA 95
+++ DFG A+ + V T Y +PE+L +++ +C D+W++GCI ++
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--TEKSACKSSDLWALGCIIYQLV 228
Query: 96 TRKPLFQGDSE 106
P F+ +E
Sbjct: 229 AGLPPFRAGNE 239
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSC-PVDVWSIGCIFAEIA 95
+++ DFG A+ + V T Y +PE+L +++ +C D+W++GCI ++
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--TEKSACKSSDLWALGCIIYQLV 228
Query: 96 TRKPLFQGDSE 106
P F+ +E
Sbjct: 229 AGLPPFRAGNE 239
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 33/156 (21%)
Query: 39 VKVADFGLARAFGVPVRIY----THEVVTLWYRAPEVLLGS------QRYSCPVDVWSIG 88
+ ++DFGL + + + T +RAPE+L S +R + +D++S+G
Sbjct: 167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG 226
Query: 89 CIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK 148
C+F I ++ GD + + I R G+ L + K CL
Sbjct: 227 CVFYYILSKGKHPFGD-KYSRESNIIR-----------GIFSLDEMK---------CL-- 263
Query: 149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
H ++L + DL+ + + + P R A L+H F
Sbjct: 264 HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSC-PVDVWSIGCIFAEIA 95
+++ DFG A+ + V T Y +PE+L +++ +C D+W++GCI ++
Sbjct: 146 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--TEKSACKSSDLWALGCIIYQLV 203
Query: 96 TRKPLFQGDSE 106
P F+ +E
Sbjct: 204 AGLPPFRAGNE 214
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSC-PVDVWSIGCIFAEIA 95
+++ DFG A+ + V T Y +PE+L +++ +C D+W++GCI ++
Sbjct: 174 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--TEKSACKSSDLWALGCIIYQLV 231
Query: 96 TRKPLFQGDSE 106
P F+ +E
Sbjct: 232 AGLPPFRAGNE 242
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 76/192 (39%), Gaps = 45/192 (23%)
Query: 16 QVKITTRLFLQATSFCIKPK--------SNI-------VKVADFGLARAFGVPVRIYTHE 60
Q+++ R L+A +F + N+ +++ADFG++ ++
Sbjct: 110 QIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF 169
Query: 61 VVTLWYRAPEVLLGSQRYSCP----VDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRV 116
+ T ++ APEV++ P D+WS+G E+A +P E++ + RV
Sbjct: 170 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHH---ELNPM----RV 222
Query: 117 LTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAE 176
L + + P + + F ++ LDK+ P TR +A
Sbjct: 223 LLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKN-------------------PETRPSAA 263
Query: 177 NALKHKYFADKT 188
L+H + + T
Sbjct: 264 QLLEHPFVSSIT 275
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 76/192 (39%), Gaps = 45/192 (23%)
Query: 16 QVKITTRLFLQATSFCIKPK--------SNI-------VKVADFGLARAFGVPVRIYTHE 60
Q+++ R L+A +F + N+ +++ADFG++ ++
Sbjct: 118 QIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF 177
Query: 61 VVTLWYRAPEVLLGSQRYSCP----VDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRV 116
+ T ++ APEV++ P D+WS+G E+A +P E++ + RV
Sbjct: 178 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHH---ELNPM----RV 230
Query: 117 LTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAE 176
L + + P + + F ++ LDK+ P TR +A
Sbjct: 231 LLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKN-------------------PETRPSAA 271
Query: 177 NALKHKYFADKT 188
L+H + + T
Sbjct: 272 QLLEHPFVSSIT 283
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 71/190 (37%), Gaps = 50/190 (26%)
Query: 22 RLF---LQATSFC---------IKPKSNIV------KVADFGLARAFGVPVRIYTHEVVT 63
RLF L A +C +KP++ ++ K+ADFGL+ +
Sbjct: 115 RLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRDSCGS 173
Query: 64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
Y APEV+ G VD+WS G I + F D + LF+ R
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD-DEHVPTLFKKIR-------- 224
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
GV +P+Y L++ LL L P R ++ +H++
Sbjct: 225 --GGVFYIPEY------------------LNRSVATLLMHMLQVDPLKRATIKDIREHEW 264
Query: 184 FADKTDLPKF 193
F K DLP +
Sbjct: 265 F--KQDLPSY 272
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT- 96
+K+ DFG++ G + + V T Y APE L G+ YS D+WS+G E+A
Sbjct: 154 IKLCDFGVS---GQLIDSMANSFVGTRSYMAPERLQGTH-YSVQSDIWSMGLSLVELAVG 209
Query: 97 RKPLFQGDS-EIDQLF 111
R P+ D+ E++ +F
Sbjct: 210 RYPIPPPDAKELEAIF 225
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQR-YSCPVDVWSIGCIFAEIAT 96
V + DFGL++ F ++ T+ Y AP+++ G + VD WS+G + E+ T
Sbjct: 198 VVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 257
Query: 97 RKPLFQGDSEIDQLFRIFR 115
F D E + I R
Sbjct: 258 GASPFTVDGEKNSQAEISR 276
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 40 KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKP 99
K+ DFGL G E Y APE+L GS Y DV+S+G E+A
Sbjct: 197 KLGDFGLLVELGTAGAGEVQEGDP-RYMAPELLQGS--YGTAADVFSLGLTILEVACNME 253
Query: 100 LFQGDSEIDQL 110
L G QL
Sbjct: 254 LPHGGEGWQQL 264
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 36 SNIVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVL-LGSQRYSCPVDVWSIGCIF 91
S + K+ADFGLAR + YT + + APE + GS ++ DVWS G +
Sbjct: 320 SLVCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGS--FTIKSDVWSFGILL 375
Query: 92 AEIAT--RKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 126
EI T R P + G S + + + R P +N P
Sbjct: 376 MEIVTYGRIP-YPGMSNPEVIRALERGYRMPRPENCP 411
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 36 SNIVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVL-LGSQRYSCPVDVWSIGCIF 91
S + K+ADFGLAR + YT + + APE + GS ++ DVWS G +
Sbjct: 147 SLVCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGS--FTIKSDVWSFGILL 202
Query: 92 AEIAT--RKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 126
EI T R P + G S + + + R P +N P
Sbjct: 203 MEIVTYGRIP-YPGMSNPEVIRALERGYRMPRPENCP 238
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 32.3 bits (72), Expect = 0.19, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 40 KVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
K++DFGL++A Y + W + APE + ++S DVWS G + E
Sbjct: 510 KISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWE 565
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 32.3 bits (72), Expect = 0.20, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 40 KVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
K++DFGL++A Y + W + APE + ++S DVWS G + E
Sbjct: 509 KISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWE 564
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 42/104 (40%), Gaps = 10/104 (9%)
Query: 3 NLIQLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIY----T 58
L L E VGT L++ + +K K+ +AD GLA
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVK-KNGTCCIADLGLAVRHDSATDTIDIAPN 209
Query: 59 HEVVTLWYRAPEVLLGSQRYSC-----PVDVWSIGCIFAEIATR 97
H V T Y APEVL S D++++G +F EIA R
Sbjct: 210 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 24/93 (25%)
Query: 19 ITTRLFLQ---ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL--- 72
++ R FL A C+ V VADFGL++ +IY+ + +YR +
Sbjct: 163 LSNRNFLHRDLAARNCMLRDDMTVCVADFGLSK------KIYSGD----YYRQGRIAKMP 212
Query: 73 --------LGSQRYSCPVDVWSIGCIFAEIATR 97
L + Y+ DVW+ G EIATR
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATR 245
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
+ K+ADFGL+R V V+ + W L Y+ DVWS G + EI +
Sbjct: 180 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIES--LNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
+ K+ADFGL+R V V+ + W L Y+ DVWS G + EI +
Sbjct: 170 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIES--LNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 38 IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
+ K+ADFGL+R V V+ + W L Y+ DVWS G + EI +
Sbjct: 177 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIES--LNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 60/153 (39%), Gaps = 32/153 (20%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ADFG + P TL Y PE++ G + + VD+WS+G + E
Sbjct: 151 LKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGM 207
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
P F+ + + RI RV + TFP++ + +
Sbjct: 208 PPFEAHTYQETYRRISRV------------------EFTFPDF-----------VTEGAR 238
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
DL+ + L + + R+ L+H + + P
Sbjct: 239 DLISRLLKHNASQRLTLAEVLEHPWIKANSSKP 271
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 21/154 (13%)
Query: 39 VKVADFGLARAF---GVPVRIYTHEVVT----LWYRAPEVLLG----SQRYSCPVDVWSI 87
VK+ DFGL G I T E++T Y APEV+ + Y D+WS+
Sbjct: 153 VKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSL 212
Query: 88 GCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD 147
G I + + P F G D + R P N + + K FP D
Sbjct: 213 GVILYILLSGYPPFVGRCGSDCGWD--RGEACPACQNML-FESIQEGKYEFP-------D 262
Query: 148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
K ++ DL+ K L+ R++A L+H
Sbjct: 263 KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 10/104 (9%)
Query: 3 NLIQLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIY----T 58
L L E VGT L++ + +K K+ +AD GLA
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVK-KNGTCCIADLGLAVRHDSATDTIDIAPN 170
Query: 59 HEVVTLWYRAPEVL---LGSQRYSC--PVDVWSIGCIFAEIATR 97
H V T Y APEVL + + + D++++G +F EIA R
Sbjct: 171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 32 IKPKSNI-VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI 90
+ P+ N + + DFGL++ I + T Y APEVL + YS VD WSIG I
Sbjct: 140 LTPEENSKIMITDFGLSKM--EQNGIMSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVI 196
Query: 91 FAEIATRKPLFQGDSE 106
+ P F ++E
Sbjct: 197 TYILLCGYPPFYEETE 212
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 42/104 (40%), Gaps = 10/104 (9%)
Query: 3 NLIQLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIY----T 58
L L E VGT L++ + +K K+ +AD GLA
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVK-KNGTCCIADLGLAVRHDSATDTIDIAPN 196
Query: 59 HEVVTLWYRAPEVLLGSQRYSC-----PVDVWSIGCIFAEIATR 97
H V T Y APEVL S D++++G +F EIA R
Sbjct: 197 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 240
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 36 SNIV-KVADFGLARAF-GVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
SN+V KV+DFGLAR P YT + + + +PE + ++++ DVWS G +
Sbjct: 182 SNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEA-IAYRKFTSASDVWSYGIVL 240
Query: 92 AEIAT 96
E+ +
Sbjct: 241 WEVMS 245
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 10/104 (9%)
Query: 3 NLIQLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIY----T 58
L L E VGT L++ + +K K+ +AD GLA
Sbjct: 113 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVK-KNGTCCIADLGLAVRHDSATDTIDIAPN 171
Query: 59 HEVVTLWYRAPEVL---LGSQRYSC--PVDVWSIGCIFAEIATR 97
H V T Y APEVL + + + D++++G +F EIA R
Sbjct: 172 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 215
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 37 NIVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEV--LLGSQRYSCPVDVWSIGCIF 91
N VK+ DFGLA + E ++ LW APEV + S YS DV++ G +
Sbjct: 145 NTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM-APEVIRMQDSNPYSFQSDVYAFGIVL 203
Query: 92 AEIATRKPLFQGDSEIDQLFRI 113
E+ T + + + DQ+ +
Sbjct: 204 YELMTGQLPYSNINNRDQIIEM 225
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
K++DFGL++A Y + W + APE + ++S DVWS G + E
Sbjct: 144 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWE 200
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 28/148 (18%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFG +++ + + + V T Y APEVLL + DVWS G +
Sbjct: 156 LKICDFGYSKSSVLHSQPKS-TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGA 214
Query: 99 PLFQGDSEIDQLFR--IFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQD 156
F+ D E + FR I R+L +PDY PE +
Sbjct: 215 YPFE-DPEEPKNFRKTIHRILNVQY--------AIPDYVHISPECRH------------- 252
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYF 184
L+ + + PA RI+ H++F
Sbjct: 253 ---LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
K++DFGL++A Y + W + APE + ++S DVWS G + E
Sbjct: 166 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
K++DFGL++A Y + W + APE + ++S DVWS G + E
Sbjct: 166 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWE 222
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
K++DFGL++A Y + W + APE + ++S DVWS G + E
Sbjct: 146 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWE 202
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 75/200 (37%), Gaps = 52/200 (26%)
Query: 13 GTYQVKITTRLFLQATS---FC---------IKPKSNIV------KVADFGLARAFGVPV 54
G K + RLF Q S +C +KP++ ++ K+ADFGL+
Sbjct: 111 GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DG 169
Query: 55 RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI-FAEIATRKPLFQGDSEIDQLFRI 113
+ Y APEV+ G VD+WS G I +A + P D + LF+
Sbjct: 170 EFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF--DDDHVPTLFKK 227
Query: 114 FRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI 173
G+ P Y L+ + LL+ L P R
Sbjct: 228 I----------CDGIFYTPQY------------------LNPSVISLLKHMLQVDPMKRA 259
Query: 174 NAENALKHKYFADKTDLPKF 193
++ +H++F K DLPK+
Sbjct: 260 TIKDIREHEWF--KQDLPKY 277
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
K++DFGL++A Y + W + APE + ++S DVWS G + E
Sbjct: 150 AKISDFGLSKALRADENXYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWE 206
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 28/148 (18%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFG +++ + + + V T Y APEVLL + DVWS G +
Sbjct: 155 LKICDFGYSKSSVLHSQPKS-TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGA 213
Query: 99 PLFQGDSEIDQLFR--IFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQD 156
F+ D E + FR I R+L +PDY PE +
Sbjct: 214 YPFE-DPEEPKNFRKTIHRILNVQY--------AIPDYVHISPECRH------------- 251
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYF 184
L+ + + PA RI+ H++F
Sbjct: 252 ---LISRIFVADPAKRISIPEIRNHEWF 276
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 10/104 (9%)
Query: 3 NLIQLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIY----T 58
L L E VGT L++ + +K K+ +AD GLA
Sbjct: 115 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVK-KNGTCCIADLGLAVRHDSATDTIDIAPN 173
Query: 59 HEVVTLWYRAPEVL---LGSQRYSC--PVDVWSIGCIFAEIATR 97
H V T Y APEVL + + + D++++G +F EIA R
Sbjct: 174 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 217
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 39 VKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
VK+ADFGLA+ + Y + WY APE L +S DVWS G + E+
Sbjct: 153 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APES-LSDNIFSRQSDVWSFGVVLYEL 210
Query: 95 AT 96
T
Sbjct: 211 FT 212
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
K++DFGL++A Y + W + APE + ++S DVWS G + E
Sbjct: 150 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWE 206
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
K++DFGL++A Y + W + APE + ++S DVWS G + E
Sbjct: 164 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWE 220
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
K++DFGL++A Y + W + APE + ++S DVWS G + E
Sbjct: 156 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWE 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 10/104 (9%)
Query: 3 NLIQLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIY----T 58
L L E VGT L++ + +K K+ +AD GLA
Sbjct: 118 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVK-KNGTCCIADLGLAVRHDSATDTIDIAPN 176
Query: 59 HEVVTLWYRAPEVL---LGSQRYSC--PVDVWSIGCIFAEIATR 97
H V T Y APEVL + + + D++++G +F EIA R
Sbjct: 177 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 220
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 37 NIVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEV--LLGSQRYSCPVDVWSIGCIF 91
N VK+ DFGLA + E ++ LW APEV + S YS DV++ G +
Sbjct: 157 NTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM-APEVIRMQDSNPYSFQSDVYAFGIVL 215
Query: 92 AEIATRKPLFQGDSEIDQLFRI 113
E+ T + + + DQ+ +
Sbjct: 216 YELMTGQLPYSNINNRDQIIEM 237
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFGLA+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 181 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 239
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEV--LLGSQRYSCPVDVWSIGC 89
+ N VK+ DFGLA + E ++ LW APEV + S YS DV++ G
Sbjct: 155 EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM-APEVIRMQDSNPYSFQSDVYAFGI 213
Query: 90 IFAEIATRKPLFQGDSEIDQLFRI 113
+ E+ T + + + DQ+ +
Sbjct: 214 VLYELMTGQLPYSNINNRDQIIEM 237
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT- 96
+K+ DFG++ G + + V T Y +PE L G+ YS D+WS+G E+A
Sbjct: 206 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVG 261
Query: 97 RKPLFQGDS-EIDQLF 111
R P+ D+ E++ +F
Sbjct: 262 RYPIPPPDAKELELMF 277
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 39 VKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
VK+ADFGLA+ + Y + WY APE L +S DVWS G + E+
Sbjct: 154 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APES-LSDNIFSRQSDVWSFGVVLYEL 211
Query: 95 AT 96
T
Sbjct: 212 FT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 39 VKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
VK+ADFGLA+ + Y + WY APE L +S DVWS G + E+
Sbjct: 166 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APES-LSDNIFSRQSDVWSFGVVLYEL 223
Query: 95 AT 96
T
Sbjct: 224 FT 225
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 65/163 (39%), Gaps = 38/163 (23%)
Query: 38 IVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL--LGSQRYSCPV--------DVW 85
++K+ DFG+A + +V + Y PE + + S R + DVW
Sbjct: 192 MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 251
Query: 86 SIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC 145
S+GCI + K FQ I+Q+ ++ ++ P+++ FP+
Sbjct: 252 SLGCILYYMTYGKTPFQ--QIINQISKLHAIID-------------PNHEIEFPDIP--- 293
Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
++D D+L+ L P RI+ L H Y +T
Sbjct: 294 --------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 328
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFGLA+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 166 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 224
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
+++ DFG A+ + V T Y +PE LL + D+W++GCI ++
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKSAXKSSDLWALGCIIYQLVA 229
Query: 97 RKPLFQGDSE 106
P F+ +E
Sbjct: 230 GLPPFRAGNE 239
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPV 82
L A + +K + VK+ DFGLA+ G + Y E V + + A E +L + Y+
Sbjct: 144 LAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQS 201
Query: 83 DVWSIGCIFAEIAT 96
DVWS G E+ T
Sbjct: 202 DVWSYGVTVWELMT 215
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPV 82
L A + +K + VK+ DFGLA+ G + Y E V + + A E +L + Y+
Sbjct: 143 LAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQS 200
Query: 83 DVWSIGCIFAEIAT 96
DVWS G E+ T
Sbjct: 201 DVWSYGVTVWELMT 214
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+ N+ KV+DFGL + T ++ W APE L +++S DVWS G + EI
Sbjct: 324 EDNVAKVSDFGLTKEASSTQD--TGKLPVKW-TAPEALR-EKKFSTKSDVWSFGILLWEI 379
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 15/118 (12%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL---LGSQRYSCPVDVWSIGCIFAEIA 95
VK+ DFG++ + V T + Y APE + L + YS D+WS+G E+A
Sbjct: 193 VKMCDFGIS-GYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA 251
Query: 96 TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVK 151
+ F DS ++ +V+ P+ +LP + F ++++ CL K+ K
Sbjct: 252 ILR--FPYDSWGTPFQQLKQVVEEPS-------PQLPADKFSAEFVDFTSQCLKKNSK 300
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
+K+ DFG++ G + + V T Y +PE L G+ YS D+WS+G E+A
Sbjct: 171 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVG 226
Query: 98 K 98
+
Sbjct: 227 R 227
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFGLA+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 217
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRY--SCPVDVWSIG 88
+K+ADFG++ F + ++ V T + APE L +++ +DVW++G
Sbjct: 176 IKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMG 227
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPV 82
L A + +K + VK+ DFGLA+ G + Y E V + + A E +L + Y+
Sbjct: 143 LAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQS 200
Query: 83 DVWSIGCIFAEIAT 96
DVWS G E+ T
Sbjct: 201 DVWSYGVTVWELMT 214
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFGLA+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 217
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFGLA+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 214
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFGLA+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 162 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 220
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFGLA+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 217
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPV 82
L A + +K + VK+ DFGLA+ G + Y E V + + A E +L + Y+
Sbjct: 137 LAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQS 194
Query: 83 DVWSIGCIFAEIAT 96
DVWS G E+ T
Sbjct: 195 DVWSYGVTVWELMT 208
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFGLA+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 157 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPV 82
L A + +K + VK+ DFGLA+ G + Y E V + + A E +L + Y+
Sbjct: 143 LAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQS 200
Query: 83 DVWSIGCIFAEIAT 96
DVWS G E+ T
Sbjct: 201 DVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFGLA+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFGLA+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 158 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 31.2 bits (69), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFGLA+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 158 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 216
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 31.2 bits (69), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPV 82
L A + +K + VK+ DFGLA+ G + Y E V + + A E +L + Y+
Sbjct: 177 LAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQS 234
Query: 83 DVWSIGCIFAEIAT 96
DVWS G E+ T
Sbjct: 235 DVWSYGVTVWELMT 248
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 31.2 bits (69), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPV 82
L A + +K + VK+ DFGLA+ G + Y E V + + A E +L + Y+
Sbjct: 140 LAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQS 197
Query: 83 DVWSIGCIFAEIAT 96
DVWS G E+ T
Sbjct: 198 DVWSYGVTVWELMT 211
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 31.2 bits (69), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWS 86
A + + N+ KV+DFGL + T ++ W APE L +++S DVWS
Sbjct: 129 AARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLPVKW-TAPEALR-EKKFSTKSDVWS 184
Query: 87 IGCIFAEI 94
G + EI
Sbjct: 185 FGILLWEI 192
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFGLA+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 160 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 218
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFGLA+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 163 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFGLA+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 163 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 221
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFGLA+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 163 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 55/141 (39%), Gaps = 18/141 (12%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLL---GSQRYSCPVDVWSIGCI 90
KS +K+ADFG + V T Y +PEVL G Y D WS+G
Sbjct: 208 KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 267
Query: 91 FAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN----FCL 146
E+ F DS + +I + T PD E N F
Sbjct: 268 LYEMLVGDTPFYADSLVGTYSKIMNHKNSLT---------FPDDNDISKEAKNLICAFLT 318
Query: 147 DKHVKNLDQDGLDLLEKTLIY 167
D+ V+ L ++G++ +++ L +
Sbjct: 319 DREVR-LGRNGVEEIKRHLFF 338
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT- 96
+K+ DFG++ G + + V T Y +PE L G+ YS D+WS+G E+A
Sbjct: 144 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVG 199
Query: 97 RKPLFQGDS-EIDQLF 111
R P+ D+ E++ +F
Sbjct: 200 RYPIPPPDAKELELMF 215
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT- 96
+K+ DFG++ G + + V T Y +PE L G+ YS D+WS+G E+A
Sbjct: 144 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVG 199
Query: 97 RKPLFQGDS-EIDQLF 111
R P+ D+ E++ +F
Sbjct: 200 RYPIPPPDAKELELMF 215
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFGLA+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 214
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT- 96
+K+ DFG++ G + + V T Y +PE L G+ YS D+WS+G E+A
Sbjct: 144 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVG 199
Query: 97 RKPLFQGDS-EIDQLF 111
R P+ D+ E++ +F
Sbjct: 200 RYPIPPPDAKELELMF 215
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 39 VKVADFGLAR-AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
+K+ DFGL++ + + Y+ T+ Y APEV+ + ++ D WS G + E+ T
Sbjct: 165 IKLTDFGLSKESIDHEKKAYSF-CGTVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTG 222
Query: 98 KPLFQGDSEIDQLFRIFRV 116
FQG + + I +
Sbjct: 223 TLPFQGKDRKETMTMILKA 241
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWS 86
A + + N+ KV+DFGL + T ++ W APE L +++S DVWS
Sbjct: 144 AARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLPVKW-TAPEALR-EKKFSTKSDVWS 199
Query: 87 IGCIFAEI 94
G + EI
Sbjct: 200 FGILLWEI 207
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 55/141 (39%), Gaps = 18/141 (12%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLL---GSQRYSCPVDVWSIGCI 90
KS +K+ADFG + V T Y +PEVL G Y D WS+G
Sbjct: 203 KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 262
Query: 91 FAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN----FCL 146
E+ F DS + +I + T PD E N F
Sbjct: 263 LYEMLVGDTPFYADSLVGTYSKIMNHKNSLT---------FPDDNDISKEAKNLICAFLT 313
Query: 147 DKHVKNLDQDGLDLLEKTLIY 167
D+ V+ L ++G++ +++ L +
Sbjct: 314 DREVR-LGRNGVEEIKRHLFF 333
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT- 96
+K+ DFG++ G + + V T Y +PE L G+ YS D+WS+G E+A
Sbjct: 144 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVG 199
Query: 97 RKPLFQGDS-EIDQLF 111
R P+ D+ E++ +F
Sbjct: 200 RYPIPPPDAKELELMF 215
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 37 NIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
+VK+ DFGLA+A Y + WY APE L + Y DVWS G
Sbjct: 149 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECKFYYAS-DVWSFGVTLY 206
Query: 93 EIAT 96
E+ T
Sbjct: 207 ELLT 210
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 30.8 bits (68), Expect = 0.45, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGC-IFAEIAT 96
V+++D GLA F + H V T Y APEVL Y D +S+GC +F +
Sbjct: 331 VRISDLGLACDFS---KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Query: 97 RKPLFQGDS----EIDQL 110
P Q + EID++
Sbjct: 388 HSPFRQHKTKDKHEIDRM 405
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 30.8 bits (68), Expect = 0.46, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGC-IFAEIAT 96
V+++D GLA F + H V T Y APEVL Y D +S+GC +F +
Sbjct: 330 VRISDLGLACDFS---KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
Query: 97 RKPLFQGDS----EIDQL 110
P Q + EID++
Sbjct: 387 HSPFRQHKTKDKHEIDRM 404
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 55/141 (39%), Gaps = 18/141 (12%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLL---GSQRYSCPVDVWSIGCI 90
KS +K+ADFG + V T Y +PEVL G Y D WS+G
Sbjct: 208 KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 267
Query: 91 FAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN----FCL 146
E+ F DS + +I + T PD E N F
Sbjct: 268 LYEMLVGDTPFYADSLVGTYSKIMNHKNSLT---------FPDDNDISKEAKNLICAFLT 318
Query: 147 DKHVKNLDQDGLDLLEKTLIY 167
D+ V+ L ++G++ +++ L +
Sbjct: 319 DREVR-LGRNGVEEIKRHLFF 338
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 63 TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRV 116
TL Y PE++ G + ++ VD+W IG + E+ P F+ S + RI +V
Sbjct: 184 TLDYLPPEMIEG-RMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV 236
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 30.8 bits (68), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 37 NIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
+VK+ DFGLA+A Y + WY APE L + Y DVWS G
Sbjct: 148 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECKFYYAS-DVWSFGVTLY 205
Query: 93 EIAT 96
E+ T
Sbjct: 206 ELLT 209
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 30.8 bits (68), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI-FAEIATR 97
VK+ADFGL+ + T + Y APEV+ G VDVWS G + + + R
Sbjct: 147 VKIADFGLSNIMTDGNFLKT-SCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205
Query: 98 KPLFQGDSEIDQLFR 112
P D I LF+
Sbjct: 206 LPF--DDEFIPNLFK 218
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 30.8 bits (68), Expect = 0.48, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGC-IFAEIAT 96
V+++D GLA F + H V T Y APEVL Y D +S+GC +F +
Sbjct: 331 VRISDLGLACDFS---KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Query: 97 RKPLFQGDS----EIDQL 110
P Q + EID++
Sbjct: 388 HSPFRQHKTKDKHEIDRM 405
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 30.8 bits (68), Expect = 0.48, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGC-IFAEIAT 96
V+++D GLA F + H V T Y APEVL Y D +S+GC +F +
Sbjct: 331 VRISDLGLACDFS---KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Query: 97 RKPLFQGDS----EIDQL 110
P Q + EID++
Sbjct: 388 HSPFRQHKTKDKHEIDRM 405
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 39 VKVADFGLAR-AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
+K+ DFGL++ + + Y+ T+ Y APEV+ + ++ D WS G + E+ T
Sbjct: 166 IKLTDFGLSKESIDHEKKAYSF-CGTVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTG 223
Query: 98 KPLFQGDSEIDQLFRIFRV 116
FQG + + I +
Sbjct: 224 TLPFQGKDRKETMTMILKA 242
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 39 VKVADFGLAR-AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
+K+ DFGL++ + + Y+ T+ Y APEV+ + ++ D WS G + E+ T
Sbjct: 165 IKLTDFGLSKESIDHEKKAYSF-CGTVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTG 222
Query: 98 KPLFQGDSEIDQLFRIFRV 116
FQG + + I +
Sbjct: 223 TLPFQGKDRKETMTMILKA 241
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPV 82
L A + +K N VK+ DFGLAR + Y + V + + A E +L +R++
Sbjct: 145 LAARNVLVK-SPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL-RRRFTHQS 202
Query: 83 DVWSIGCIFAEIAT 96
DVWS G E+ T
Sbjct: 203 DVWSYGVTVWELMT 216
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 15/99 (15%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVL-LGSQRYSCPVDVWSIGCI 90
+S + K+ADFGLAR + YT + + APE + G ++ DVWS G +
Sbjct: 145 ESLMCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGC--FTIKSDVWSFGIL 200
Query: 91 FAEIATRKPL-FQGDSEID------QLFRIFRVLTTPTE 122
EI T + + G + D Q +R+ RV P E
Sbjct: 201 LYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDE 239
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 41/169 (24%)
Query: 25 LQATSFCIKPKSNI----------VKVADFGLARA--FGVPVRIYTHEVVTLWYRAPEVL 72
LQ F +KP++ + +K+ DFGLA FG + + T + APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGTPEFVAPEIV 189
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
+ D+WSIG I + + F GD++ + L + V
Sbjct: 190 -NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---------------- 232
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
+Y+ D++ N D + + L+ P R+ +++L+H
Sbjct: 233 NYEFE---------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 30.8 bits (68), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Query: 37 NIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
+VK+ DFGLA+A Y + WY APE L + Y DVWS G
Sbjct: 154 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYAS-DVWSFGVTLY 211
Query: 93 EIATR 97
E+ T
Sbjct: 212 ELLTH 216
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Query: 37 NIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
+VK+ DFGLA+A Y + WY APE L + Y DVWS G
Sbjct: 154 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYAS-DVWSFGVTLY 211
Query: 93 EIATR 97
E+ T
Sbjct: 212 ELLTH 216
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 48/125 (38%), Gaps = 26/125 (20%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLL---GSQRYSCPVDVWSIGCI 90
K +K+ADFG ++ V T Y +PEVL G Y D WS+G
Sbjct: 209 KHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 268
Query: 91 FAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT--FPEWSNFCLDK 148
E+ F DS + SK+ D+K + FPE + + K
Sbjct: 269 LFEMLVGDTPFYADSLVGTY------------------SKIMDHKNSLCFPEDAE--ISK 308
Query: 149 HVKNL 153
H KNL
Sbjct: 309 HAKNL 313
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 70/175 (40%), Gaps = 41/175 (23%)
Query: 25 LQATSFCIKPKSNI----------VKVADFGLARA--FGVPVRIYTHEVVTLWYRAPEVL 72
LQ F +KP++ + +K+ DFGLA FG + + T + APE++
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGTPEFVAPEIV 188
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
+ D+WSIG I + + F GD++ + L + V
Sbjct: 189 -NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---------------- 231
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 187
+Y+ D++ N D + + L+ P R+ +++L+H + K
Sbjct: 232 NYEFE---------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 277
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 41/169 (24%)
Query: 25 LQATSFCIKPKSNI----------VKVADFGLARA--FGVPVRIYTHEVVTLWYRAPEVL 72
LQ F +KP++ + +K+ DFGLA FG + + T + APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGTPEFVAPEIV 189
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
+ D+WSIG I + + F GD++ + L + V
Sbjct: 190 -NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---------------- 232
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
+Y+ D++ N D + + L+ P R+ +++L+H
Sbjct: 233 NYEFE---------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 41/169 (24%)
Query: 25 LQATSFCIKPKSNI----------VKVADFGLARA--FGVPVRIYTHEVVTLWYRAPEVL 72
LQ F +KP++ + +K+ DFGLA FG + + T + APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGTPEFVAPEIV 189
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
+ D+WSIG I + + F GD++ + L + V
Sbjct: 190 -NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---------------- 232
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
+Y+ D++ N D + + L+ P R+ +++L+H
Sbjct: 233 NYEFE---------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 30.4 bits (67), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Query: 37 NIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
+VK+ DFGLA+A Y + WY APE L + Y DVWS G
Sbjct: 171 RLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECLKEYKFYYAS-DVWSFGVTLY 228
Query: 93 EIATR 97
E+ T
Sbjct: 229 ELLTH 233
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 30.4 bits (67), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 41/169 (24%)
Query: 25 LQATSFCIKPKSNI----------VKVADFGLARA--FGVPVRIYTHEVVTLWYRAPEVL 72
LQ F +KP++ + +K+ DFGLA FG + + T + APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
+ D+WSIG I + + F GD++ + L + V
Sbjct: 190 -NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---------------- 232
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
+Y+ D++ N D + + L+ P R+ +++L+H
Sbjct: 233 NYEFE---------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 30.4 bits (67), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 41/169 (24%)
Query: 25 LQATSFCIKPKSNI----------VKVADFGLARA--FGVPVRIYTHEVVTLWYRAPEVL 72
LQ F +KP++ + +K+ DFGLA FG + + T + APE++
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGTPEFVAPEIV 188
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
+ D+WSIG I + + F GD++ + L + V
Sbjct: 189 -NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---------------- 231
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
+Y+ D++ N D + + L+ P R+ +++L+H
Sbjct: 232 NYEFE---------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 271
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 30.4 bits (67), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 41/169 (24%)
Query: 25 LQATSFCIKPKSNI----------VKVADFGLARA--FGVPVRIYTHEVVTLWYRAPEVL 72
LQ F +KP++ + +K+ DFGLA FG + + T + APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
+ D+WSIG I + + F GD++ + L + V
Sbjct: 190 -NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---------------- 232
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
+Y+ D++ N D + + L+ P R+ +++L+H
Sbjct: 233 NYEFE---------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 30.4 bits (67), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 41/169 (24%)
Query: 25 LQATSFCIKPKSNI----------VKVADFGLARA--FGVPVRIYTHEVVTLWYRAPEVL 72
LQ F +KP++ + +K+ DFGLA FG + + T + APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGTPEFVAPEIV 189
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
+ D+WSIG I + + F GD++ + L + V
Sbjct: 190 -NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---------------- 232
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
+Y+ D++ N D + + L+ P R+ +++L+H
Sbjct: 233 NYEFE---------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 30.4 bits (67), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 41/169 (24%)
Query: 25 LQATSFCIKPKS------NI----VKVADFGLARA--FGVPVRIYTHEVVTLWYRAPEVL 72
LQ F +KP++ N+ +K+ DFGLA FG + + T + APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
+ D+WSIG I + + F GD++ + L + V
Sbjct: 190 -NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---------------- 232
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
+Y+ D++ N D + + L+ P R+ +++L+H
Sbjct: 233 NYEFE---------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 30.4 bits (67), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 35 KSNIVKVADFGLARAF----GVPVRIYTHEVVTLWYRAPEVL-LGSQRYSCPVDVWSIGC 89
KS +K+ DFGL++ F T + T ++ APEVL ++ Y D WS G
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264
Query: 90 IFAEIATRKPLFQGDSEIDQLFRIF 114
+ + F G ++ D + ++
Sbjct: 265 LLHLLLMGAVPFPGVNDADTISQVL 289
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 30.0 bits (66), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 41/169 (24%)
Query: 25 LQATSFCIKPKS------NI----VKVADFGLARA--FGVPVRIYTHEVVTLWYRAPEVL 72
LQ F +KP++ N+ +K+ DFGLA FG + + T + APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
+ D+WSIG I + + F GD++ + L + V
Sbjct: 190 -NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---------------- 232
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
+Y+ D++ N D + + L+ P R+ +++L+H
Sbjct: 233 NYEFE---------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 30.0 bits (66), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 41/169 (24%)
Query: 25 LQATSFCIKPKS------NI----VKVADFGLARA--FGVPVRIYTHEVVTLWYRAPEVL 72
LQ F +KP++ N+ +K+ DFGLA FG + + T + APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
+ D+WSIG I + + F GD++ + L + V
Sbjct: 190 -NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---------------- 232
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
+Y+ D++ N D + + L+ P R+ +++L+H
Sbjct: 233 NYEFE---------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 30.0 bits (66), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 67/177 (37%), Gaps = 57/177 (32%)
Query: 25 LQATSFCIKPKS------NI----VKVADFGLARA----------FGVPVRIYTHEVVTL 64
LQ F +KP++ N+ +K+ DFGLA FG P
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPA---------- 182
Query: 65 WYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDN 124
+ APE++ + D+WSIG I + + F GD++ + L + V
Sbjct: 183 -FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV-------- 232
Query: 125 WPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
+Y+ D++ N D + + L+ P R+ +++L+H
Sbjct: 233 --------NYEFE---------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 30.0 bits (66), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 41/169 (24%)
Query: 25 LQATSFCIKPKS------NI----VKVADFGLARA--FGVPVRIYTHEVVTLWYRAPEVL 72
LQ F +KP++ N+ +K+ DFGLA FG + + T + APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
+ D+WSIG I + + F GD++ + L + V
Sbjct: 190 -NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---------------- 232
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
+Y+ D++ N D + + L+ P R+ +++L+H
Sbjct: 233 NYEFE---------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 30.0 bits (66), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVD 83
A C+ + VKV+DFG+ R V Y V T + + APEV +YS D
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTRY--VLDDQYVSSVGTKFPVKWSAPEV-FHYFKYSSKSD 187
Query: 84 VWSIGCIFAEI 94
VW+ G + E+
Sbjct: 188 VWAFGILMWEV 198
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 30.0 bits (66), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 41/169 (24%)
Query: 25 LQATSFCIKPKS------NI----VKVADFGLARA--FGVPVRIYTHEVVTLWYRAPEVL 72
LQ F +KP++ N+ +K+ DFGLA FG + + T + APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
+ D+WSIG I + + F GD++ + L + V
Sbjct: 190 -NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---------------- 232
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
+Y+ D++ N D + + L+ P R+ +++L+H
Sbjct: 233 NYEFE---------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Query: 10 EQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYT---HEVVTLWY 66
E +G + K L A + + + ++VK+ DFGL RA Y H V +
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATR-DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 67 RAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
APE L ++ +S D W G E+ T
Sbjct: 181 CAPES-LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 30.0 bits (66), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIG 88
+K+ DFG A YT T+ Y APEVL+G+ +++WS+G
Sbjct: 169 IKLIDFGSAAYLERGKLFYTF-CGTIEYCAPEVLMGNPYRGPELEMWSLG 217
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 29.6 bits (65), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
K VKV DFGL+R T + APEVL + + DV+S G I E+
Sbjct: 174 KKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLR-DEPSNEKSDVYSFGVILWEL 232
Query: 95 AT 96
AT
Sbjct: 233 AT 234
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 29.6 bits (65), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Query: 10 EQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYT---HEVVTLWY 66
E +G + K L A + + + ++VK+ DFGL RA Y H V +
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATR-DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 67 RAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
APE L ++ +S D W G E+ T
Sbjct: 181 CAPES-LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Query: 10 EQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYT---HEVVTLWY 66
E +G + K L A + + + ++VK+ DFGL RA Y H V +
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATR-DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 190
Query: 67 RAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
APE L ++ +S D W G E+ T
Sbjct: 191 CAPES-LKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Query: 10 EQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYT---HEVVTLWY 66
E +G + K L A + + + ++VK+ DFGL RA Y H V +
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATR-DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 67 RAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
APE L ++ +S D W G E+ T
Sbjct: 185 CAPES-LKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
A C+ + VK+ DFG+ R R ++ + + +PE L ++ DV
Sbjct: 150 AARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGV-FTTYSDV 208
Query: 85 WSIGCIFAEIAT--RKPLFQGDSEIDQLFR 112
WS G + EIAT +P +QG S +Q+ R
Sbjct: 209 WSFGVVLWEIATLAEQP-YQGLSN-EQVLR 236
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Query: 10 EQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYT---HEVVTLWY 66
E +G + K L A + + + ++VK+ DFGL RA Y H V +
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATR-DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 67 RAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
APE L ++ +S D W G E+ T
Sbjct: 185 CAPES-LKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
A C+ + VK+ DFG+ R R ++ + + +PE L ++ DV
Sbjct: 159 AARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGV-FTTYSDV 217
Query: 85 WSIGCIFAEIAT--RKPLFQGDSEIDQLFR 112
WS G + EIAT +P +QG S +Q+ R
Sbjct: 218 WSFGVVLWEIATLAEQP-YQGLSN-EQVLR 245
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
K VKV DFGL+R T + APEVL + + DV+S G I E+
Sbjct: 174 KKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLR-DEPSNEKSDVYSFGVILWEL 232
Query: 95 AT 96
AT
Sbjct: 233 AT 234
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 47/126 (37%), Gaps = 27/126 (21%)
Query: 61 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFR--IFRVLT 118
V T Y APEVLL + DVWS G + F+ D E + FR I R+L
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE-DPEEPKNFRKTIHRILN 235
Query: 119 TPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA 178
+PDY PE + L+ + + PA RI+
Sbjct: 236 VQY--------AIPDYVHISPECRH----------------LISRIFVADPAKRISIPEI 271
Query: 179 LKHKYF 184
H++F
Sbjct: 272 RNHEWF 277
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 47/126 (37%), Gaps = 27/126 (21%)
Query: 61 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFR--IFRVLT 118
V T Y APEVLL + DVWS G + F+ D E + FR I R+L
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE-DPEEPKNFRKTIHRILN 235
Query: 119 TPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA 178
+PDY PE + L+ + + PA RI+
Sbjct: 236 VQY--------AIPDYVHISPECRH----------------LISRIFVADPAKRISIPEI 271
Query: 179 LKHKYF 184
H++F
Sbjct: 272 RNHEWF 277
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 19 ITTRLFLQ---ATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLL 73
+++R F+ A C+ + V VADFGL+R G R + + + A E L
Sbjct: 153 LSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALES-L 211
Query: 74 GSQRYSCPVDVWSIGCIFAEIATR 97
Y+ DVW+ G EI TR
Sbjct: 212 ADNLYTVHSDVWAFGVTMWEIMTR 235
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 39 VKVADFGLARAFGV----PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
VK+ADFGLA+ + V + WY APE L +S DVWS G + E+
Sbjct: 150 VKIADFGLAKLLPLDKDXXVVREPGQSPIFWY-APES-LSDNIFSRQSDVWSFGVVLYEL 207
Query: 95 AT 96
T
Sbjct: 208 FT 209
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 40 KVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
K+ADFGLAR + YT + + APE + ++ DVWS G + EI T
Sbjct: 159 KIADFGLARL--IEDNEYTAREGAKFPIKWTAPEA-INYGTFTIKSDVWSFGILLTEIVT 215
Query: 97 RK----PLFQGDSEIDQLFRIFRVL 117
P I L R +R++
Sbjct: 216 HGRIPYPGMTNPEVIQNLERGYRMV 240
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 40 KVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
K+ADFGLAR + YT + + APE + ++ DVWS G + EI T
Sbjct: 155 KIADFGLARL--IEDNEYTAREGAKFPIKWTAPEA-INYGTFTIKSDVWSFGILLTEIVT 211
Query: 97 RK----PLFQGDSEIDQLFRIFRVL 117
P I L R +R++
Sbjct: 212 HGRIPYPGMTNPEVIQNLERGYRMV 236
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 40 KVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
K+ADFGLAR + YT + + APE + ++ DVWS G + EI T
Sbjct: 154 KIADFGLARL--IEDNEYTAREGAKFPIKWTAPEA-INYGTFTIKSDVWSFGILLTEIVT 210
Query: 97 RK----PLFQGDSEIDQLFRIFRVL 117
P I L R +R++
Sbjct: 211 HGRIPYPGMTNPEVIQNLERGYRMV 235
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 38 IVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+VK+ DFGLAR + + + + + APE L Y+ DVWS G + EI
Sbjct: 210 VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF-EGIYTIKSDVWSYGILLWEI 267
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 40 KVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
K+ADFGLAR + YT + + APE + ++ DVWS G + EI T
Sbjct: 149 KIADFGLARL--IEDNEYTAREGAKFPIKWTAPEA-INYGTFTIKSDVWSFGILLTEIVT 205
Query: 97 RK----PLFQGDSEIDQLFRIFRVL 117
P I L R +R++
Sbjct: 206 HGRIPYPGMTNPEVIQNLERGYRMV 230
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 13/94 (13%)
Query: 40 KVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
K+ADFGLAR + YT + + APE + ++ DVWS G + EI T
Sbjct: 145 KIADFGLARL--IEDNEYTAREGAKFPIKWTAPEA-INYGTFTIKSDVWSFGILLTEIVT 201
Query: 97 RK----PLFQGDSEIDQLFRIFRVLTTPTEDNWP 126
P I L R +R++ DN P
Sbjct: 202 HGRIPYPGMTNPEVIQNLERGYRMVRP---DNCP 232
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 40 KVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
K+ADFGLAR + YT + + APE + ++ DVWS G + EI T
Sbjct: 144 KIADFGLARL--IEDNEYTAREGAKFPIKWTAPEA-INYGTFTIKSDVWSFGILLTEIVT 200
Query: 97 RK----PLFQGDSEIDQLFRIFRVL 117
P I L R +R++
Sbjct: 201 HGRIPYPGMTNPEVIQNLERGYRMV 225
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 6/83 (7%)
Query: 40 KVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
K+ADFGLAR + + APE + ++ DVWS G + EI T
Sbjct: 149 KIADFGLARLIEDAEXTAREGAKFPIKWTAPEA-INYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 99 ----PLFQGDSEIDQLFRIFRVL 117
P I L R +R++
Sbjct: 208 RIPYPGMTNPEVIQNLERGYRMV 230
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 10/104 (9%)
Query: 3 NLIQLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIY----T 58
L L E GT L++ + +K K+ +AD GLA
Sbjct: 146 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVK-KNGQCCIADLGLAVMHSQSTNQLDVGNN 204
Query: 59 HEVVTLWYRAPEVLLGSQRYSC-----PVDVWSIGCIFAEIATR 97
V T Y APEVL + + C VD+W+ G + E+A R
Sbjct: 205 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 248
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 63/167 (37%), Gaps = 28/167 (16%)
Query: 30 FCIKP-KSNIVKVADFGLARAFGVP---VRIYTHEVVT----LWYRAPEVLL----GSQR 77
C P K + VK+ DF L + I T E+ T Y APEV+ +
Sbjct: 143 LCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATF 202
Query: 78 YSCPVDVWSIGCIFAEIATRKPLFQGDSEID---QLFRIFRVLTTPTEDNWPGVSKLPDY 134
Y D+WS+G + + + P F G D + RV + +
Sbjct: 203 YDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKL------FESIQEG 256
Query: 135 KTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
K FP DK ++ + DL+ K L+ R++A L+H
Sbjct: 257 KYEFP-------DKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQH 296
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 10/104 (9%)
Query: 3 NLIQLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIY----T 58
L L E GT L++ + +K K+ +AD GLA
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVK-KNGQCCIADLGLAVMHSQSTNQLDVGNN 175
Query: 59 HEVVTLWYRAPEVLLGSQRYSC-----PVDVWSIGCIFAEIATR 97
V T Y APEVL + + C VD+W+ G + E+A R
Sbjct: 176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 10/104 (9%)
Query: 3 NLIQLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIY----T 58
L L E GT L++ + +K K+ +AD GLA
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVK-KNGQCCIADLGLAVMHSQSTNQLDVGNN 175
Query: 59 HEVVTLWYRAPEVLLGSQRYSC-----PVDVWSIGCIFAEIATR 97
V T Y APEVL + + C VD+W+ G + E+A R
Sbjct: 176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVL-LGSQRYSCPVDVWSIGCI 90
+S + K+ADFGLAR + YT + + APE + G ++ +VWS G +
Sbjct: 144 ESLMCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGC--FTIKSNVWSFGIL 199
Query: 91 FAEIATRKPL-FQGDSEIDQLFRIFRVLTTPTEDNWP 126
EI T + + G + D + + + P +N P
Sbjct: 200 LYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCP 236
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFG A+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 158 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFG A+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 158 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFG A+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 156 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 214
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 18/89 (20%)
Query: 40 KVADFGLARAFGVPVRIYTHEVVT-------LWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K+ADFGLAR I +E + + APE + ++ DVWS G +
Sbjct: 157 KIADFGLARL------IEDNEXTAREGAKFPIKWTAPEA-INYGTFTIKSDVWSFGILLT 209
Query: 93 EIATRK----PLFQGDSEIDQLFRIFRVL 117
EI T P I L R +R++
Sbjct: 210 EIVTHGRIPYPGMTNPEVIQNLERGYRMV 238
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+ N+ KV+DFGL + T ++ W APE L +S DVWS G + EI
Sbjct: 143 EDNVAKVSDFGLTKE--ASSTQDTGKLPVKW-TAPEALR-EAAFSTKSDVWSFGILLWEI 198
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFG A+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 158 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 18/89 (20%)
Query: 40 KVADFGLARAFGVPVRIYTHEVVT-------LWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K+ADFGLAR I +E + + APE + ++ DVWS G +
Sbjct: 155 KIADFGLARL------IEDNEXTAREGAKFPIKWTAPEA-INYGTFTIKSDVWSFGILLT 207
Query: 93 EIATRK----PLFQGDSEIDQLFRIFRVL 117
EI T P I L R +R++
Sbjct: 208 EIVTHGRIPYPGMTNPEVIQNLERGYRMV 236
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 18/89 (20%)
Query: 40 KVADFGLARAFGVPVRIYTHEVVT-------LWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K+ADFGLAR I +E + + APE + ++ DVWS G +
Sbjct: 151 KIADFGLARL------IEDNEXTAREGAKFPIKWTAPEA-INYGTFTIKSDVWSFGILLT 203
Query: 93 EIATRK----PLFQGDSEIDQLFRIFRVL 117
EI T P I L R +R++
Sbjct: 204 EIVTHGRIPYPGMTNPEVIQNLERGYRMV 232
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Query: 10 EQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF---GVPVRIYTHEVVTLWY 66
E +G + K L A + + + ++VK+ DFGL RA + H V +
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATR-DLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 180
Query: 67 RAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
APE L ++ +S D W G E+ T
Sbjct: 181 CAPES-LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 18/89 (20%)
Query: 40 KVADFGLARAFGVPVRIYTHEVVT-------LWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K+ADFGLAR I +E + + APE + ++ DVWS G +
Sbjct: 150 KIADFGLARL------IEDNEXTAREGAKFPIKWTAPEA-INYGTFTIKSDVWSFGILLT 202
Query: 93 EIATRK----PLFQGDSEIDQLFRIFRVL 117
EI T P I L R +R++
Sbjct: 203 EIVTHGRIPYPGMTNPEVIQNLERGYRMV 231
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFG A+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 160 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 218
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLA V + + T + APE++ + D+WSIG I + +
Sbjct: 158 IKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGA 215
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 131
F GD++ + L I V E+ + S+L
Sbjct: 216 SPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 18/89 (20%)
Query: 40 KVADFGLARAFGVPVRIYTHEVVT-------LWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K+ADFGLAR I +E + + APE + ++ DVWS G +
Sbjct: 149 KIADFGLARL------IEDNEXTAREGAKFPIKWTAPEA-INYGTFTIKSDVWSFGILLT 201
Query: 93 EIATRK----PLFQGDSEIDQLFRIFRVL 117
EI T P I L R +R++
Sbjct: 202 EIVTHGRIPYPGMTNPEVIQNLERGYRMV 230
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 18/89 (20%)
Query: 40 KVADFGLARAFGVPVRIYTHEVVT-------LWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K+ADFGLAR I +E + + APE + ++ DVWS G +
Sbjct: 158 KIADFGLARL------IEDNEXTAREGAKFPIKWTAPEA-INYGTFTIKSDVWSFGILLT 210
Query: 93 EIATRK----PLFQGDSEIDQLFRIFRVL 117
EI T P I L R +R++
Sbjct: 211 EIVTHGRIPYPGMTNPEVIQNLERGYRMV 239
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 10 EQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVR-----IYTHEVVTL 64
E +G + K L A + + + ++VK+ DFGL RA +P + H V
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATR-DLVKIGDFGLMRA--LPQNDDHXVMQEHRKVPF 188
Query: 65 WYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
+ APE L ++ +S D W G E+ T
Sbjct: 189 AWCAPES-LKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 18/89 (20%)
Query: 40 KVADFGLARAFGVPVRIYTHEVVT-------LWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
K+ADFGLAR I +E + + APE + ++ DVWS G +
Sbjct: 149 KIADFGLARL------IEDNEXTAREGAKFPIKWTAPEA-INYGTFTIKSDVWSFGILLT 201
Query: 93 EIATRK----PLFQGDSEIDQLFRIFRVL 117
EI T P I L R +R++
Sbjct: 202 EIVTHGRIPYPGMTNPEVIQNLERGYRMV 230
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 13/104 (12%)
Query: 37 NIVKVADFGLARAFGVP---VRIYTHEVV---TLWYRAPEVLLGSQRYSCPVDVWSIGCI 90
++ K+ DFG AR V +Y E ++ RA ++Y VD+WSIG
Sbjct: 153 SVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVT 212
Query: 91 FAEIATR----KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 130
F AT +P F+G ++ +++++T GV K
Sbjct: 213 FYHAATGSLPFRP-FEGPRRNKEV--MYKIITGKPSGAISGVQK 253
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 39 VKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
VK+ DFG A+ G + Y E V + + A E +L + Y+ DVWS G E+ T
Sbjct: 163 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMT 221
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 60/154 (38%), Gaps = 21/154 (13%)
Query: 39 VKVADFGLARAF---GVPVRIYTHEVVT----LWYRAPEVLLG----SQRYSCPVDVWSI 87
VK+ DF L G I T E++T Y APEV+ + Y D+WS+
Sbjct: 153 VKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSL 212
Query: 88 GCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD 147
G I + + P F G D + R P N + + K FP D
Sbjct: 213 GVILYILLSGYPPFVGRCGSDCGWD--RGEACPACQNML-FESIQEGKYEFP-------D 262
Query: 148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
K ++ DL+ K L+ R++A L+H
Sbjct: 263 KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 27/143 (18%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLA V + + T + APE++ + D+WSIG I + +
Sbjct: 158 IKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGA 215
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
F GD++ + L I V E+ + S+L
Sbjct: 216 SPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK------------------------- 250
Query: 159 DLLEKTLIYCPATRINAENALKH 181
D + K L+ R+ + AL+H
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRH 273
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
A C+ + VK+ DFG+ R R ++ + + +PE L ++ DV
Sbjct: 187 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDV 245
Query: 85 WSIGCIFAEIAT--RKPLFQGDSEIDQLFR 112
WS G + EIAT +P +QG S +Q+ R
Sbjct: 246 WSFGVVLWEIATLAEQP-YQGLSN-EQVLR 273
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 25/99 (25%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCP----- 81
A C+ + VK+ DFG+ R IY T +YR L R+ P
Sbjct: 158 AARNCMVAEDFTVKIGDFGMTRD------IYE----TDYYRKGGKGLLPVRWMSPESLKD 207
Query: 82 ------VDVWSIGCIFAEIAT--RKPLFQGDSEIDQLFR 112
DVWS G + EIAT +P +QG S +Q+ R
Sbjct: 208 GVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSN-EQVLR 244
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
A C+ + VK+ DFG+ R R ++ + + +PE L ++ DV
Sbjct: 158 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDV 216
Query: 85 WSIGCIFAEIAT--RKPLFQGDSEIDQLFR 112
WS G + EIAT +P +QG S +Q+ R
Sbjct: 217 WSFGVVLWEIATLAEQP-YQGLSN-EQVLR 244
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
A C+ + VK+ DFG+ R R ++ + + +PE L ++ DV
Sbjct: 159 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDV 217
Query: 85 WSIGCIFAEIAT--RKPLFQGDSEIDQLFR 112
WS G + EIAT +P +QG S +Q+ R
Sbjct: 218 WSFGVVLWEIATLAEQP-YQGLSN-EQVLR 245
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLA V + + T + APE++ + D+WSIG I + +
Sbjct: 158 IKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGA 215
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 131
F GD++ + L I V E+ + S+L
Sbjct: 216 SPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
A C+ + VK+ DFG+ R R ++ + + +PE L ++ DV
Sbjct: 165 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDV 223
Query: 85 WSIGCIFAEIAT--RKPLFQGDSEIDQLFR 112
WS G + EIAT +P +QG S +Q+ R
Sbjct: 224 WSFGVVLWEIATLAEQP-YQGLSN-EQVLR 251
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
A C+ + VK+ DFG+ R R ++ + + +PE L ++ DV
Sbjct: 152 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDV 210
Query: 85 WSIGCIFAEIAT--RKPLFQGDSEIDQLFR 112
WS G + EIAT +P +QG S +Q+ R
Sbjct: 211 WSFGVVLWEIATLAEQP-YQGLSN-EQVLR 238
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
A C+ + VK+ DFG+ R R ++ + + +PE L ++ DV
Sbjct: 156 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDV 214
Query: 85 WSIGCIFAEIAT--RKPLFQGDSEIDQLFR 112
WS G + EIAT +P +QG S +Q+ R
Sbjct: 215 WSFGVVLWEIATLAEQP-YQGLSN-EQVLR 242
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
A C+ + VK+ DFG+ R R ++ + + +PE L ++ DV
Sbjct: 155 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDV 213
Query: 85 WSIGCIFAEIAT--RKPLFQGDSEIDQLFR 112
WS G + EIAT +P +QG S +Q+ R
Sbjct: 214 WSFGVVLWEIATLAEQP-YQGLSN-EQVLR 241
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 14/92 (15%)
Query: 66 YRAPEVL---LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTE 122
Y APE + L + YS D+WS+G E+A + F DS ++ +V+ P+
Sbjct: 175 YMAPERINPELNQKGYSVKSDIWSLGITMIELAILR--FPYDSWGTPFQQLKQVVEEPS- 231
Query: 123 DNWPGVSKLP--DYKTTFPEWSNFCLDKHVKN 152
+LP + F ++++ CL K+ K
Sbjct: 232 ------PQLPADKFSAEFVDFTSQCLKKNSKE 257
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 25/99 (25%)
Query: 27 ATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCP----- 81
A C+ + VK+ DFG+ R IY T +YR L R+ P
Sbjct: 165 AARNCMVAEDFTVKIGDFGMTR------DIYE----TDYYRKGGKGLLPVRWMSPESLKD 214
Query: 82 ------VDVWSIGCIFAEIAT--RKPLFQGDSEIDQLFR 112
DVWS G + EIAT +P +QG S +Q+ R
Sbjct: 215 GVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSN-EQVLR 251
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLA V + + T + APE++ + D+WSIG I + +
Sbjct: 158 IKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGA 215
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 131
F GD++ + L I V E+ + S+L
Sbjct: 216 SPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 13/104 (12%)
Query: 37 NIVKVADFGLARAFGVP---VRIYTHEVV---TLWYRAPEVLLGSQRYSCPVDVWSIGCI 90
++ K+ DFG AR V +Y E ++ RA ++Y VD+WSIG
Sbjct: 153 SVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVT 212
Query: 91 FAEIATR----KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 130
F AT +P F+G ++ +++++T GV K
Sbjct: 213 FYHAATGSLPFRP-FEGPRRNKEV--MYKIITGKPSGAISGVQK 253
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 26/129 (20%)
Query: 32 IKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRY-----------SC 80
+ K N+V + DFGLA+ + R + H + YR + L G+ RY S
Sbjct: 140 LGKKGNLVYIIDFGLAKKY-RDARTHQH----IPYRENKNLTGTARYASINTHLGIEQSR 194
Query: 81 PVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRV----LTTPTEDNWPGVSKLPDYKT 136
D+ S+G + +QG + + R+ ++TP E G Y +
Sbjct: 195 RDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKG------YPS 248
Query: 137 TFPEWSNFC 145
F + NFC
Sbjct: 249 EFSTYLNFC 257
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 26/129 (20%)
Query: 32 IKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRY-----------SC 80
+ K N+V + DFGLA+ + R + H + YR + L G+ RY S
Sbjct: 140 LGKKGNLVYIIDFGLAKKY-RDARTHQH----IPYRENKNLTGTARYASINTHLGIEQSR 194
Query: 81 PVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRV----LTTPTEDNWPGVSKLPDYKT 136
D+ S+G + +QG + + R+ ++TP E G Y +
Sbjct: 195 RDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKG------YPS 248
Query: 137 TFPEWSNFC 145
F + NFC
Sbjct: 249 EFATYLNFC 257
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 26/129 (20%)
Query: 32 IKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRY-----------SC 80
+ K N+V + DFGLA+ + R + H + YR + L G+ RY S
Sbjct: 138 LGKKGNLVYIIDFGLAKKY-RDARTHQH----IPYRENKNLTGTARYASINTHLGIEQSR 192
Query: 81 PVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRV----LTTPTEDNWPGVSKLPDYKT 136
D+ S+G + +QG + + R+ ++TP E G Y +
Sbjct: 193 RDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKG------YPS 246
Query: 137 TFPEWSNFC 145
F + NFC
Sbjct: 247 EFATYLNFC 255
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 6/33 (18%)
Query: 63 TLWYRAPEVLLGSQRYSCPVD----VWSIGCIF 91
T+ YRAPE+ S + C +D VWS+GC+
Sbjct: 206 TISYRAPELF--SVQSHCVIDERTDVWSLGCVL 236
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLA V + + T + APE++ + D+WSIG I + +
Sbjct: 158 IKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGA 215
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 131
F GD++ + L I V E+ + S+L
Sbjct: 216 SPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 48/123 (39%), Gaps = 30/123 (24%)
Query: 66 YRAPEVLLGSQRYSC-PVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDN 124
++ PE+ G +S VD+WS G I T F+GD+ ++++F E+
Sbjct: 177 FQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN----IYKLF-------ENI 225
Query: 125 WPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
G +P P S DLL+ L Y PA R + +H +F
Sbjct: 226 GKGSYAIPG--DCGPPLS----------------DLLKGMLEYEPAKRFSIRQIRQHSWF 267
Query: 185 ADK 187
K
Sbjct: 268 RKK 270
>pdb|2W8Y|A Chain A, Ru486 Bound To The Progesterone Receptor In A Destabilized
Agonistic Conformation
pdb|2W8Y|B Chain B, Ru486 Bound To The Progesterone Receptor In A Destabilized
Agonistic Conformation
pdb|3ZR7|A Chain A, Structural Basis For Agonism And Antagonism For A Set Of
Chemically Related Progesterone Receptor Modulators
pdb|3ZR7|B Chain B, Structural Basis For Agonism And Antagonism For A Set Of
Chemically Related Progesterone Receptor Modulators
pdb|3ZRA|A Chain A, Structural Basis For Agonism And Antagonism For A Set Of
Chemically Related Progesterone Receptor Modulators
pdb|3ZRA|B Chain B, Structural Basis For Agonism And Antagonism For A Set Of
Chemically Related Progesterone Receptor Modulators
pdb|3ZRB|A Chain A, Structural Basis For Agonism And Antagonism For A Set Of
Chemically Related Progesterone Receptor Modulators
pdb|3ZRB|B Chain B, Structural Basis For Agonism And Antagonism For A Set Of
Chemically Related Progesterone Receptor Modulators
pdb|4A2J|A Chain A, Pr X-Ray Structures In Agonist Conformations Reveal Two
Different Mechanisms For Partial Agonism In 11beta-
Substituted Steroids
pdb|4A2J|B Chain B, Pr X-Ray Structures In Agonist Conformations Reveal Two
Different Mechanisms For Partial Agonism In 11beta-
Substituted Steroids
pdb|4APU|A Chain A, Pr X-Ray Structures In Agonist Conformations Reveal Two
Different Mechanisms For Partial Agonism In
11beta-Substituted Steroid
pdb|4APU|B Chain B, Pr X-Ray Structures In Agonist Conformations Reveal Two
Different Mechanisms For Partial Agonism In
11beta-Substituted Steroid
Length = 260
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 49 AFGVPVRIYTHEVVTLWYRAPEVLLGSQR------YSCPVDVWSIGCIFAEIATRKPLF 101
FG+ R Y H + Y AP+++L QR YS + +W I F ++ + F
Sbjct: 87 VFGLGWRSYKHVSGQMLYFAPDLILNEQRMKESSFYSLCLTMWQIPQEFVKLQVSQEEF 145
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 57/147 (38%), Gaps = 26/147 (17%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC-IFAEIATR 97
+K+ DFG +++ + + + V T Y APEVLL + DVWS G ++ +
Sbjct: 157 LKICDFGYSKSSVLHSQPKS-TVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGA 215
Query: 98 KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
P + D I R+L+ +PD PE +
Sbjct: 216 YPFEDPEEPRDYRKTIQRILSVKY--------SIPDDIRISPECCH-------------- 253
Query: 158 LDLLEKTLIYCPATRINAENALKHKYF 184
L+ + + PATRI+ H +F
Sbjct: 254 --LISRIFVADPATRISIPEIKTHSWF 278
>pdb|1SQN|A Chain A, Progesterone Receptor Ligand Binding Domain With Bound
Norethindrone
pdb|1SQN|B Chain B, Progesterone Receptor Ligand Binding Domain With Bound
Norethindrone
Length = 261
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 49 AFGVPVRIYTHEVVTLWYRAPEVLLGSQR------YSCPVDVWSIGCIFAEIATRKPLF 101
FG+ R Y H + Y AP+++L QR YS + +W I F ++ + F
Sbjct: 88 VFGLGWRSYKHVSGQMLYFAPDLILNEQRMKESSFYSLCLTMWQIPQEFVKLQVSQEEF 146
>pdb|3G8O|A Chain A, Progesterone Receptor With Bound Pyrrolidine 1
pdb|3G8O|B Chain B, Progesterone Receptor With Bound Pyrrolidine 1
Length = 263
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 49 AFGVPVRIYTHEVVTLWYRAPEVLLGSQR------YSCPVDVWSIGCIFAEIATRKPLF 101
FG+ R Y H + Y AP+++L QR YS + +W I F ++ + F
Sbjct: 90 VFGLGWRSYKHVSGQMLYFAPDLILNEQRMKESSFYSLCLTMWQIPQEFVKLQVSQEEF 148
>pdb|1A28|A Chain A, Hormone-Bound Human Progesterone Receptor Ligand-Binding
Domain
pdb|1A28|B Chain B, Hormone-Bound Human Progesterone Receptor Ligand-Binding
Domain
pdb|2OVH|A Chain A, Progesterone Receptor With Bound Asoprisnil And A Peptide
From The Co-Repressor Smrt
pdb|2OVM|A Chain A, Progesterone Receptor With Bound Asoprisnil And A Peptide
From The Co-Repressor Ncor
pdb|3HQ5|A Chain A, Progesterone Receptor Bound To An Alkylpyrrolidine Ligand.
pdb|3HQ5|B Chain B, Progesterone Receptor Bound To An Alkylpyrrolidine Ligand
Length = 256
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 49 AFGVPVRIYTHEVVTLWYRAPEVLLGSQR------YSCPVDVWSIGCIFAEIATRKPLF 101
FG+ R Y H + Y AP+++L QR YS + +W I F ++ + F
Sbjct: 83 VFGLGWRSYKHVSGQMLYFAPDLILNEQRMKESSFYSLCLTMWQIPQEFVKLQVSQEEF 141
>pdb|1SR7|A Chain A, Progesterone Receptor Hormone Binding Domain With Bound
Mometasone Furoate
pdb|1SR7|B Chain B, Progesterone Receptor Hormone Binding Domain With Bound
Mometasone Furoate
pdb|1ZUC|B Chain B, Progesterone Receptor Ligand Binding Domain In Complex
With The Nonsteroidal Agonist Tanaproget
pdb|1ZUC|A Chain A, Progesterone Receptor Ligand Binding Domain In Complex
With The Nonsteroidal Agonist Tanaproget
Length = 259
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 49 AFGVPVRIYTHEVVTLWYRAPEVLLGSQR------YSCPVDVWSIGCIFAEIATRKPLF 101
FG+ R Y H + Y AP+++L QR YS + +W I F ++ + F
Sbjct: 86 VFGLGWRSYKHVSGQMLYFAPDLILNEQRMKESSFYSLCLTMWQIPQEFVKLQVSQEEF 144
>pdb|1E3K|A Chain A, Human Progesteron Receptor Ligand Binding Domain In
Complex With The Ligand Metribolone (R1881)
pdb|1E3K|B Chain B, Human Progesteron Receptor Ligand Binding Domain In
Complex With The Ligand Metribolone (R1881)
pdb|3D90|A Chain A, Crystal Structure Of The Human Progesterone Receptor
Ligand- Binding Domain Bound To Levonorgestrel
pdb|3D90|B Chain B, Crystal Structure Of The Human Progesterone Receptor
Ligand- Binding Domain Bound To Levonorgestrel
Length = 258
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 49 AFGVPVRIYTHEVVTLWYRAPEVLLGSQR------YSCPVDVWSIGCIFAEIATRKPLF 101
FG+ R Y H + Y AP+++L QR YS + +W I F ++ + F
Sbjct: 85 VFGLGWRSYKHVSGQMLYFAPDLILNEQRMKESSFYSLCLTMWQIPQEFVKLQVSQEEF 143
>pdb|3KBA|A Chain A, Progesterone Receptor Bound To Sulfonamide Pyrrolidine
Partial Agonist
pdb|3KBA|B Chain B, Progesterone Receptor Bound To Sulfonamide Pyrrolidine
Partial Agonist
Length = 253
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 49 AFGVPVRIYTHEVVTLWYRAPEVLLGSQR------YSCPVDVWSIGCIFAEIATRKPLF 101
FG+ R Y H + Y AP+++L QR YS + +W I F ++ + F
Sbjct: 80 VFGLGWRSYKHVSGQMLYFAPDLILNEQRMKESSFYSLCLTMWQIPQEFVKLQVSQEEF 138
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 39 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
+K+ DFGLA V + + T + APE++ + D+WSIG I + +
Sbjct: 158 IKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGA 215
Query: 99 PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 131
F GD++ + L I V E+ + S+L
Sbjct: 216 SPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 35 KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
+ K+ DFG YT T Y PE + Q ++ P VWS+G + ++
Sbjct: 175 RRGCAKLIDFGSGALLHD--EPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDM 232
Query: 95 ATRKPLFQGDSEI 107
F+ D EI
Sbjct: 233 VCGDIPFERDQEI 245
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 44/112 (39%), Gaps = 24/112 (21%)
Query: 2 CNLIQLEWEQVGTY-QVKITTRLFLQATSFCIKPKSNI-VKVADFGLARA---------F 50
C L L E GT + I R F S + KSN+ +AD GLA
Sbjct: 116 CGLAHLHVEIFGTQGKPAIAHRDF---KSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDI 172
Query: 51 GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCP-----VDVWSIGCIFAEIATR 97
G R+ T Y APEVL R C D+W+ G + EIA R
Sbjct: 173 GNNPRVGTKR-----YMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARR 219
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 25 LQATSFCIKPKSNIVKVADFGLA---RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCP 81
L+ + I + VK+ D GLA RA I T E + APE ++Y
Sbjct: 157 LKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPE-----FXAPEXY--EEKYDES 209
Query: 82 VDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT 119
VDV++ G E AT + + SE +I+R +T+
Sbjct: 210 VDVYAFGXCXLEXATSEYPY---SECQNAAQIYRRVTS 244
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 14/91 (15%)
Query: 66 YRAPEVL---LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTE 122
Y APE + L + YS D+WS+G E+A + F DS ++ +V+ P+
Sbjct: 202 YXAPERINPELNQKGYSVKSDIWSLGITXIELAILR--FPYDSWGTPFQQLKQVVEEPS- 258
Query: 123 DNWPGVSKLP--DYKTTFPEWSNFCLDKHVK 151
+LP + F ++++ CL K+ K
Sbjct: 259 ------PQLPADKFSAEFVDFTSQCLKKNSK 283
>pdb|1S5J|A Chain A, Insight In Dna Replication: The Crystal Structure Of Dna
Polymerase B1 From The Archaeon Sulfolobus Solfataricus
Length = 847
Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 98 KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV 150
KP F D E D++ +I +++ P+ D+ VSK+ Y W+ F L K V
Sbjct: 52 KPYFLVDLEPDKVGKIPKIVRDPSFDHIETVSKIDPY-----TWNKFKLTKIV 99
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.140 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,103,904
Number of Sequences: 62578
Number of extensions: 243230
Number of successful extensions: 1811
Number of sequences better than 100.0: 852
Number of HSP's better than 100.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 432
Number of HSP's that attempted gapping in prelim test: 884
Number of HSP's gapped (non-prelim): 870
length of query: 197
length of database: 14,973,337
effective HSP length: 94
effective length of query: 103
effective length of database: 9,091,005
effective search space: 936373515
effective search space used: 936373515
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 49 (23.5 bits)