Query psy6391
Match_columns 313
No_of_seqs 130 out of 2204
Neff 10.4
Searched_HMMs 46136
Date Fri Aug 16 16:41:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6391.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6391hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0659|consensus 100.0 4.6E-56 9.9E-61 350.5 22.9 285 14-302 2-286 (318)
2 KOG0615|consensus 100.0 3.4E-57 7.5E-62 376.6 15.9 267 10-304 168-444 (475)
3 KOG0575|consensus 100.0 3.4E-55 7.4E-60 381.5 24.7 267 8-308 7-280 (592)
4 KOG0593|consensus 100.0 4.3E-56 9.4E-61 356.7 16.6 287 13-302 1-289 (396)
5 KOG0581|consensus 100.0 1.8E-55 4E-60 363.1 20.7 261 8-303 73-341 (364)
6 KOG0663|consensus 100.0 1.3E-54 2.9E-59 352.4 24.3 289 11-302 73-366 (419)
7 KOG0600|consensus 100.0 2.3E-54 5E-59 368.1 24.8 289 10-302 113-405 (560)
8 KOG0661|consensus 100.0 2.4E-55 5.1E-60 371.6 16.3 293 9-306 5-300 (538)
9 KOG0594|consensus 100.0 1.9E-53 4.1E-58 350.7 26.9 294 13-307 10-312 (323)
10 cd07871 STKc_PCTAIRE3 Catalyti 100.0 7.5E-51 1.6E-55 347.8 28.6 285 12-300 3-288 (288)
11 KOG0598|consensus 100.0 8.5E-52 1.8E-56 341.3 20.1 260 10-302 21-286 (357)
12 KOG0592|consensus 100.0 2E-51 4.3E-56 352.9 22.2 260 10-303 69-344 (604)
13 KOG0583|consensus 100.0 1.4E-50 3.1E-55 352.0 25.9 260 10-302 13-280 (370)
14 cd07861 STKc_CDK1_euk Catalyti 100.0 2.1E-49 4.5E-54 338.3 27.9 285 15-300 1-285 (285)
15 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.6E-49 1E-53 339.2 29.3 287 13-303 4-294 (303)
16 KOG0578|consensus 100.0 1.3E-50 2.8E-55 350.1 18.7 264 11-308 270-534 (550)
17 KOG0660|consensus 100.0 9.1E-51 2E-55 334.0 16.1 285 14-302 22-315 (359)
18 KOG0582|consensus 100.0 2.7E-49 6E-54 332.5 23.5 281 4-306 16-302 (516)
19 KOG0616|consensus 100.0 3.4E-50 7.4E-55 321.8 17.2 255 11-302 41-302 (355)
20 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1E-48 2.2E-53 338.0 27.2 288 12-303 4-292 (309)
21 KOG0595|consensus 100.0 3.8E-49 8.2E-54 328.7 21.1 264 9-303 5-274 (429)
22 KOG0658|consensus 100.0 1.2E-49 2.6E-54 328.0 17.9 287 12-306 22-315 (364)
23 KOG0591|consensus 100.0 3.6E-51 7.9E-56 325.3 8.4 253 10-291 15-275 (375)
24 cd07873 STKc_PCTAIRE1 Catalyti 100.0 7.1E-48 1.5E-52 331.5 29.4 289 12-304 4-293 (301)
25 KOG0588|consensus 100.0 2.4E-49 5.2E-54 347.0 20.2 265 10-308 8-274 (786)
26 KOG0585|consensus 100.0 4.1E-49 8.8E-54 333.7 20.1 270 7-307 90-382 (576)
27 PLN00009 cyclin-dependent kina 100.0 1.1E-47 2.4E-52 329.3 29.1 294 13-307 1-294 (294)
28 KOG0033|consensus 100.0 5.6E-51 1.2E-55 318.5 7.7 264 12-304 9-274 (355)
29 cd07862 STKc_CDK6 Catalytic do 100.0 1.1E-47 2.3E-52 328.7 28.1 281 14-300 1-290 (290)
30 cd07848 STKc_CDKL5 Catalytic d 100.0 1.1E-47 2.3E-52 328.2 27.8 283 14-300 1-287 (287)
31 KOG0605|consensus 100.0 1.7E-48 3.6E-53 334.8 21.7 262 10-302 137-450 (550)
32 KOG0198|consensus 100.0 1.2E-48 2.5E-53 327.5 20.3 261 13-305 16-284 (313)
33 cd07839 STKc_CDK5 Catalytic do 100.0 1E-47 2.2E-52 327.8 26.5 282 15-300 1-284 (284)
34 KOG0597|consensus 100.0 2.8E-49 6.1E-54 340.9 16.1 257 13-303 1-257 (808)
35 cd07860 STKc_CDK2_3 Catalytic 100.0 1.2E-47 2.6E-52 327.3 25.2 284 15-300 1-284 (284)
36 KOG0662|consensus 100.0 7.8E-48 1.7E-52 288.0 19.8 289 13-304 1-290 (292)
37 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.5E-47 3.3E-52 334.7 24.4 287 15-305 1-298 (338)
38 cd07845 STKc_CDK10 Catalytic d 100.0 1.5E-46 3.3E-51 324.4 29.4 294 12-309 5-301 (309)
39 PTZ00263 protein kinase A cata 100.0 2.1E-47 4.5E-52 332.3 23.9 259 7-302 11-276 (329)
40 cd07863 STKc_CDK4 Catalytic do 100.0 1.5E-46 3.3E-51 321.2 28.9 280 15-300 1-288 (288)
41 PTZ00036 glycogen synthase kin 100.0 6.9E-47 1.5E-51 340.2 26.7 284 13-304 65-358 (440)
42 KOG0580|consensus 100.0 1.7E-48 3.7E-53 303.3 13.9 264 6-303 14-279 (281)
43 cd07836 STKc_Pho85 Catalytic d 100.0 1.8E-46 3.8E-51 320.1 27.7 284 15-300 1-284 (284)
44 cd05612 STKc_PRKX_like Catalyt 100.0 4.1E-47 8.9E-52 325.1 23.0 252 14-302 1-259 (291)
45 KOG0667|consensus 100.0 2E-47 4.3E-52 336.2 20.1 281 15-303 187-508 (586)
46 cd07835 STKc_CDK1_like Catalyt 100.0 2.3E-46 5E-51 319.3 26.2 283 16-300 1-283 (283)
47 KOG0192|consensus 100.0 1.2E-46 2.6E-51 324.6 24.4 260 7-296 34-298 (362)
48 cd07837 STKc_CdkB_plant Cataly 100.0 7.3E-46 1.6E-50 318.1 29.0 287 14-301 1-295 (295)
49 cd07843 STKc_CDC2L1 Catalytic 100.0 2.5E-46 5.5E-51 320.6 25.3 286 12-300 3-293 (293)
50 cd05571 STKc_PKB Catalytic dom 100.0 1.1E-46 2.3E-51 327.2 22.1 249 20-302 1-256 (323)
51 KOG0032|consensus 100.0 4.5E-46 9.8E-51 323.6 25.9 264 10-304 31-300 (382)
52 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.5E-46 3.3E-51 329.0 23.0 287 11-305 12-306 (343)
53 cd07832 STKc_CCRK Catalytic do 100.0 9.8E-46 2.1E-50 315.8 27.2 284 15-301 1-286 (286)
54 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.2E-46 6.9E-51 325.6 24.4 261 14-303 1-263 (333)
55 cd07841 STKc_CDK7 Catalytic do 100.0 1.6E-45 3.4E-50 316.5 28.1 290 15-308 1-293 (298)
56 PTZ00426 cAMP-dependent protei 100.0 3E-46 6.5E-51 325.9 23.7 258 8-302 24-289 (340)
57 cd05631 STKc_GRK4 Catalytic do 100.0 5.8E-46 1.3E-50 317.1 24.2 260 15-303 1-267 (285)
58 cd07844 STKc_PCTAIRE_like Cata 100.0 3.2E-45 7E-50 313.5 28.8 285 12-300 3-291 (291)
59 cd07853 STKc_NLK Catalytic dom 100.0 2.7E-46 5.8E-51 330.8 22.6 285 15-303 1-294 (372)
60 KOG0201|consensus 100.0 3.6E-48 7.9E-53 325.3 9.9 260 14-307 13-273 (467)
61 cd07876 STKc_JNK2 Catalytic do 100.0 6.2E-46 1.3E-50 327.0 24.6 284 11-302 18-320 (359)
62 KOG0694|consensus 100.0 3.8E-46 8.2E-51 328.8 23.0 261 9-303 363-630 (694)
63 KOG0589|consensus 100.0 4.7E-47 1E-51 325.8 16.7 259 12-301 2-262 (426)
64 cd05573 STKc_ROCK_NDR_like Cat 100.0 4E-46 8.7E-51 327.3 22.4 258 14-302 1-290 (350)
65 PHA03212 serine/threonine kina 100.0 1.9E-45 4.2E-50 326.0 25.9 277 12-303 90-382 (391)
66 cd05585 STKc_YPK1_like Catalyt 100.0 8.2E-46 1.8E-50 320.1 22.9 248 22-303 1-253 (312)
67 cd07874 STKc_JNK3 Catalytic do 100.0 1.7E-45 3.8E-50 323.7 25.1 287 9-303 12-317 (355)
68 cd07875 STKc_JNK1 Catalytic do 100.0 3.1E-45 6.7E-50 323.2 26.0 284 11-302 21-323 (364)
69 cd06649 PKc_MEK2 Catalytic dom 100.0 6E-45 1.3E-49 317.2 27.5 284 13-304 4-308 (331)
70 KOG0599|consensus 100.0 4.1E-47 8.9E-52 301.3 12.5 264 9-302 12-288 (411)
71 cd05595 STKc_PKB_beta Catalyti 100.0 1.1E-45 2.4E-50 320.7 22.7 250 20-303 1-257 (323)
72 cd05593 STKc_PKB_gamma Catalyt 100.0 1.4E-45 3.1E-50 320.6 23.2 250 20-303 1-257 (328)
73 cd05628 STKc_NDR1 Catalytic do 100.0 2.8E-45 6E-50 323.2 25.4 259 14-303 1-299 (363)
74 cd05596 STKc_ROCK Catalytic do 100.0 1.8E-45 4E-50 324.7 24.1 264 9-302 38-309 (370)
75 cd07829 STKc_CDK_like Catalyti 100.0 4E-45 8.8E-50 311.3 24.9 282 16-300 1-282 (282)
76 cd07868 STKc_CDK8 Catalytic do 100.0 4.5E-45 9.7E-50 316.4 25.4 278 19-300 6-317 (317)
77 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.9E-44 6.3E-49 306.7 30.1 283 14-300 1-286 (286)
78 cd05599 STKc_NDR_like Catalyti 100.0 1.4E-45 3.1E-50 325.4 22.6 259 14-303 1-302 (364)
79 KOG0611|consensus 100.0 1.6E-46 3.4E-51 312.7 15.5 260 13-307 52-313 (668)
80 cd05589 STKc_PKN Catalytic dom 100.0 3.5E-45 7.7E-50 317.8 24.7 252 16-302 1-262 (324)
81 KOG0610|consensus 100.0 1.8E-45 3.8E-50 307.1 20.9 266 7-302 70-397 (459)
82 cd05590 STKc_nPKC_eta Catalyti 100.0 2.8E-45 6.2E-50 317.7 23.2 249 20-302 1-258 (320)
83 PLN00034 mitogen-activated pro 100.0 1.9E-45 4E-50 323.2 22.2 261 9-303 69-334 (353)
84 cd05587 STKc_cPKC Catalytic do 100.0 5.2E-45 1.1E-49 316.8 24.7 254 15-302 1-262 (324)
85 cd07866 STKc_BUR1 Catalytic do 100.0 1.6E-44 3.4E-49 312.0 27.6 285 13-300 7-311 (311)
86 cd05626 STKc_LATS2 Catalytic d 100.0 5.4E-45 1.2E-49 323.3 24.8 259 14-302 1-310 (381)
87 cd05601 STKc_CRIK Catalytic do 100.0 2.2E-45 4.8E-50 320.0 21.3 260 14-302 1-268 (330)
88 cd05621 STKc_ROCK2 Catalytic d 100.0 5.7E-45 1.2E-49 321.3 24.0 266 8-303 37-310 (370)
89 cd05598 STKc_LATS Catalytic do 100.0 3.2E-45 7E-50 324.4 22.3 258 14-302 1-306 (376)
90 cd05591 STKc_nPKC_epsilon Cata 100.0 5.7E-45 1.2E-49 316.1 23.2 249 20-302 1-259 (321)
91 cd05608 STKc_GRK1 Catalytic do 100.0 9.9E-45 2.1E-49 308.7 23.7 255 22-303 1-263 (280)
92 cd07865 STKc_CDK9 Catalytic do 100.0 5.5E-44 1.2E-48 308.5 28.6 292 6-300 4-310 (310)
93 cd05625 STKc_LATS1 Catalytic d 100.0 8.1E-45 1.7E-49 322.5 23.3 259 14-303 1-311 (382)
94 cd05594 STKc_PKB_alpha Catalyt 100.0 2.9E-45 6.2E-50 318.5 19.9 250 20-303 1-258 (325)
95 cd07870 STKc_PFTAIRE2 Catalyti 100.0 7.6E-44 1.6E-48 305.0 28.3 284 13-300 4-291 (291)
96 cd05584 STKc_p70S6K Catalytic 100.0 6.6E-45 1.4E-49 315.9 22.0 251 19-303 1-262 (323)
97 cd05629 STKc_NDR_like_fungal C 100.0 8.1E-45 1.8E-49 321.9 23.0 258 14-302 1-310 (377)
98 cd05614 STKc_MSK2_N N-terminal 100.0 9.4E-45 2E-49 316.3 22.9 257 15-303 1-273 (332)
99 PF00069 Pkinase: Protein kina 100.0 1.8E-45 4E-50 309.7 17.8 259 16-300 1-260 (260)
100 cd05616 STKc_cPKC_beta Catalyt 100.0 2E-44 4.3E-49 312.9 24.6 254 15-302 1-262 (323)
101 KOG0666|consensus 100.0 2.5E-45 5.3E-50 295.9 17.0 293 11-303 21-343 (438)
102 cd07864 STKc_CDK12 Catalytic d 100.0 8.6E-44 1.9E-48 306.2 27.8 288 10-300 3-302 (302)
103 cd08529 STKc_FA2-like Catalyti 100.0 6.9E-44 1.5E-48 299.5 26.4 255 15-300 1-256 (256)
104 cd05570 STKc_PKC Catalytic dom 100.0 1.8E-44 3.8E-49 312.6 23.4 250 20-303 1-258 (318)
105 cd07831 STKc_MOK Catalytic dom 100.0 5.7E-44 1.2E-48 304.3 26.1 279 16-300 1-282 (282)
106 cd05118 STKc_CMGC Catalytic do 100.0 2.7E-44 5.8E-49 306.4 24.1 282 16-300 1-283 (283)
107 cd05620 STKc_nPKC_delta Cataly 100.0 2.5E-44 5.4E-49 311.3 24.0 250 20-303 1-254 (316)
108 cd07846 STKc_CDKL2_3 Catalytic 100.0 3.7E-44 8.1E-49 306.1 24.7 284 14-300 1-286 (286)
109 cd07834 STKc_MAPK Catalytic do 100.0 2.2E-44 4.7E-49 313.8 23.6 289 15-307 1-299 (330)
110 cd05605 STKc_GRK4_like Catalyt 100.0 3.6E-44 7.8E-49 306.1 24.4 259 15-302 1-266 (285)
111 cd05582 STKc_RSK_N N-terminal 100.0 3.5E-45 7.5E-50 317.1 18.3 250 19-302 1-259 (318)
112 cd05592 STKc_nPKC_theta_delta 100.0 2.7E-44 5.8E-49 311.1 23.8 250 20-303 1-254 (316)
113 cd07867 STKc_CDC2L6 Catalytic 100.0 7.5E-44 1.6E-48 308.7 26.6 278 19-300 6-317 (317)
114 cd05588 STKc_aPKC Catalytic do 100.0 2.9E-44 6.2E-49 312.6 23.9 250 20-302 1-267 (329)
115 PTZ00284 protein kinase; Provi 100.0 5.3E-44 1.2E-48 324.7 26.4 281 12-303 127-444 (467)
116 cd05622 STKc_ROCK1 Catalytic d 100.0 3.4E-44 7.4E-49 316.6 24.4 266 8-303 37-310 (371)
117 cd05575 STKc_SGK Catalytic dom 100.0 1.6E-44 3.5E-49 313.5 21.8 249 20-302 1-256 (323)
118 cd07833 STKc_CDKL Catalytic do 100.0 1.8E-43 3.8E-48 302.2 27.8 284 14-300 1-288 (288)
119 cd05597 STKc_DMPK_like Catalyt 100.0 6.4E-44 1.4E-48 310.7 25.3 262 14-302 1-271 (331)
120 cd05619 STKc_nPKC_theta Cataly 100.0 5.8E-44 1.3E-48 308.9 24.4 250 20-303 1-254 (316)
121 cd05627 STKc_NDR2 Catalytic do 100.0 2.5E-44 5.3E-49 316.9 22.3 258 14-302 1-298 (360)
122 cd08223 STKc_Nek4 Catalytic do 100.0 2.1E-43 4.5E-48 296.8 26.9 255 15-300 1-257 (257)
123 cd06656 STKc_PAK3 Catalytic do 100.0 7.5E-44 1.6E-48 305.8 24.5 268 9-310 14-282 (297)
124 cd05615 STKc_cPKC_alpha Cataly 100.0 9.7E-44 2.1E-48 308.5 25.2 255 15-303 1-263 (323)
125 PTZ00283 serine/threonine prot 100.0 6.1E-44 1.3E-48 324.9 24.9 269 4-302 22-302 (496)
126 cd07842 STKc_CDK8_like Catalyt 100.0 1.8E-43 3.8E-48 306.2 26.5 285 15-300 1-316 (316)
127 cd07840 STKc_CDK9_like Catalyt 100.0 2.5E-43 5.4E-48 301.0 26.9 282 16-300 1-287 (287)
128 cd06650 PKc_MEK1 Catalytic dom 100.0 1.3E-43 2.7E-48 309.0 25.5 280 13-304 4-306 (333)
129 cd06611 STKc_SLK_like Catalyti 100.0 3.4E-44 7.4E-49 305.5 21.4 263 14-307 5-272 (280)
130 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.1E-43 2.4E-48 310.0 25.1 287 13-303 4-297 (337)
131 cd06655 STKc_PAK2 Catalytic do 100.0 2.5E-43 5.4E-48 302.4 26.8 267 9-309 14-281 (296)
132 PTZ00024 cyclin-dependent prot 100.0 2.3E-43 5E-48 307.9 27.0 287 12-303 6-319 (335)
133 cd05618 STKc_aPKC_iota Catalyt 100.0 6.7E-44 1.5E-48 310.2 23.4 251 20-303 1-268 (329)
134 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.3E-43 4.9E-48 298.1 26.1 262 14-300 1-267 (267)
135 cd07855 STKc_ERK5 Catalytic do 100.0 8.1E-44 1.7E-48 310.6 23.5 286 14-303 5-300 (334)
136 cd06654 STKc_PAK1 Catalytic do 100.0 3.8E-43 8.2E-48 301.3 26.8 264 8-305 14-278 (296)
137 cd08218 STKc_Nek1 Catalytic do 100.0 2.4E-43 5.1E-48 296.4 25.1 255 15-300 1-256 (256)
138 KOG0197|consensus 100.0 2.8E-44 6.1E-49 309.8 19.5 255 7-296 199-456 (468)
139 cd06625 STKc_MEKK3_like Cataly 100.0 3.3E-43 7.1E-48 296.6 25.7 255 14-300 2-263 (263)
140 cd07849 STKc_ERK1_2_like Catal 100.0 1.9E-43 4.1E-48 308.5 25.0 288 13-306 4-301 (336)
141 KOG4717|consensus 100.0 1.8E-44 4E-49 308.4 17.8 262 14-307 18-280 (864)
142 cd05586 STKc_Sck1_like Catalyt 100.0 1.6E-44 3.5E-49 314.5 17.9 250 22-303 1-259 (330)
143 cd06643 STKc_SLK Catalytic dom 100.0 3.3E-43 7.1E-48 299.7 25.3 261 16-307 7-272 (282)
144 PHA03209 serine/threonine kina 100.0 4.1E-43 8.8E-48 308.5 26.4 274 13-302 65-356 (357)
145 cd05604 STKc_SGK3 Catalytic do 100.0 3.3E-44 7.1E-49 311.9 19.2 249 20-302 1-256 (325)
146 cd06609 STKc_MST3_like Catalyt 100.0 3.2E-43 6.9E-48 298.6 24.4 258 14-305 1-259 (274)
147 cd06644 STKc_STK10_LOK Catalyt 100.0 4.3E-43 9.3E-48 300.5 25.4 260 14-304 12-276 (292)
148 KOG0604|consensus 100.0 6.1E-45 1.3E-49 292.1 12.4 263 12-309 59-334 (400)
149 PTZ00267 NIMA-related protein 100.0 2.9E-43 6.3E-48 320.1 25.1 258 13-302 66-328 (478)
150 PHA03211 serine/threonine kina 100.0 9.7E-43 2.1E-47 312.6 28.1 276 13-302 168-460 (461)
151 cd08220 STKc_Nek8 Catalytic do 100.0 9.4E-43 2E-47 292.6 26.3 255 15-300 1-256 (256)
152 cd05623 STKc_MRCK_alpha Cataly 100.0 3.2E-43 6.9E-48 306.5 23.8 262 14-302 1-271 (332)
153 cd07850 STKc_JNK Catalytic dom 100.0 3E-43 6.6E-48 309.2 23.8 284 11-302 13-316 (353)
154 cd05602 STKc_SGK1 Catalytic do 100.0 1.8E-43 3.9E-48 307.2 21.9 249 20-302 1-256 (325)
155 cd05603 STKc_SGK2 Catalytic do 100.0 1.8E-43 3.9E-48 306.8 21.7 249 20-302 1-256 (321)
156 cd05617 STKc_aPKC_zeta Catalyt 100.0 3.7E-43 7.9E-48 305.4 23.6 251 20-303 1-266 (327)
157 cd08227 PK_STRAD_alpha Pseudok 100.0 5.3E-43 1.2E-47 304.6 24.5 285 18-304 2-314 (327)
158 cd05580 STKc_PKA Catalytic dom 100.0 8.9E-43 1.9E-47 298.3 25.2 254 14-304 1-261 (290)
159 cd07851 STKc_p38 Catalytic dom 100.0 3.2E-43 6.8E-48 307.9 22.8 288 11-306 12-307 (343)
160 cd08221 STKc_Nek9 Catalytic do 100.0 2.2E-42 4.7E-47 290.5 26.9 255 15-300 1-256 (256)
161 cd05630 STKc_GRK6 Catalytic do 100.0 5.5E-43 1.2E-47 298.7 23.6 259 15-302 1-266 (285)
162 cd08225 STKc_Nek5 Catalytic do 100.0 1.2E-42 2.6E-47 292.1 25.3 256 15-300 1-257 (257)
163 cd06612 STKc_MST1_2 Catalytic 100.0 7.3E-43 1.6E-47 293.3 24.0 253 14-300 3-256 (256)
164 cd05574 STKc_phototropin_like 100.0 1E-42 2.3E-47 301.4 25.6 265 14-309 1-300 (316)
165 cd05632 STKc_GRK5 Catalytic do 100.0 1.1E-42 2.4E-47 296.9 25.3 260 15-303 1-267 (285)
166 cd06619 PKc_MKK5 Catalytic dom 100.0 4.5E-43 9.8E-48 298.4 22.7 258 14-305 1-261 (279)
167 PTZ00266 NIMA-related protein 100.0 6.3E-43 1.4E-47 329.3 25.7 270 5-303 4-301 (1021)
168 cd06608 STKc_myosinIII_like Ca 100.0 7.9E-43 1.7E-47 296.0 24.0 261 10-300 2-275 (275)
169 cd05607 STKc_GRK7 Catalytic do 100.0 9.4E-43 2E-47 296.1 24.5 253 22-302 1-259 (277)
170 cd05624 STKc_MRCK_beta Catalyt 100.0 5.3E-43 1.2E-47 304.9 23.1 262 14-302 1-271 (331)
171 cd06639 STKc_myosinIIIB Cataly 100.0 2.2E-42 4.7E-47 296.0 26.4 266 6-301 14-291 (291)
172 cd06637 STKc_TNIK Catalytic do 100.0 1.3E-42 2.8E-47 294.4 24.8 257 12-300 4-272 (272)
173 cd06613 STKc_MAP4K3_like Catal 100.0 2.3E-42 5E-47 291.2 26.2 257 14-299 3-262 (262)
174 PHA03207 serine/threonine kina 100.0 1.7E-42 3.6E-47 308.3 26.5 275 13-302 91-380 (392)
175 cd07879 STKc_p38delta_MAPK13 C 100.0 1.2E-42 2.6E-47 304.1 25.0 285 13-306 14-306 (342)
176 cd06645 STKc_MAP4K3 Catalytic 100.0 1.1E-42 2.4E-47 294.1 23.7 257 13-299 8-267 (267)
177 cd06646 STKc_MAP4K5 Catalytic 100.0 1.2E-42 2.7E-47 293.8 23.9 257 13-299 8-267 (267)
178 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.7E-42 3.8E-47 303.1 25.6 284 13-302 4-305 (342)
179 cd06648 STKc_PAK_II Catalytic 100.0 3.7E-42 8E-47 293.7 27.0 261 15-309 20-281 (285)
180 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 9.5E-43 2.1E-47 297.5 23.3 262 14-304 1-269 (286)
181 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.5E-42 3.3E-47 295.7 24.0 261 14-304 1-268 (283)
182 cd07838 STKc_CDK4_6_like Catal 100.0 5.9E-42 1.3E-46 292.5 27.6 279 16-300 1-287 (287)
183 KOG0193|consensus 100.0 2.4E-44 5.3E-49 312.9 13.0 261 5-296 383-648 (678)
184 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.8E-42 6.1E-47 291.6 25.3 253 15-300 1-267 (267)
185 cd08217 STKc_Nek2 Catalytic do 100.0 2.7E-42 5.9E-47 291.0 24.8 256 15-300 1-265 (265)
186 cd06630 STKc_MEKK1 Catalytic d 100.0 1.9E-42 4.1E-47 292.8 23.5 259 15-301 1-268 (268)
187 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.8E-42 3.9E-47 295.1 23.5 264 5-300 7-282 (282)
188 cd07830 STKc_MAK_like Catalyti 100.0 2.8E-42 6E-47 294.1 24.6 281 16-300 1-283 (283)
189 cd06647 STKc_PAK_I Catalytic d 100.0 1.9E-42 4.1E-47 296.6 23.2 267 10-310 15-282 (293)
190 cd06917 STKc_NAK1_like Catalyt 100.0 2.7E-42 5.9E-47 293.3 23.9 261 15-308 2-266 (277)
191 cd06658 STKc_PAK5 Catalytic do 100.0 1.5E-42 3.3E-47 297.0 22.3 262 14-309 22-284 (292)
192 KOG0596|consensus 100.0 3.5E-43 7.6E-48 302.6 18.2 265 8-302 355-632 (677)
193 KOG0574|consensus 100.0 1E-45 2.2E-50 297.2 2.5 256 16-305 35-291 (502)
194 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.2E-42 4.7E-47 302.5 23.7 288 8-303 9-304 (343)
195 cd07877 STKc_p38alpha_MAPK14 C 100.0 3.2E-42 6.9E-47 301.7 24.5 289 9-305 12-308 (345)
196 KOG0579|consensus 100.0 4.3E-44 9.3E-49 312.7 12.2 262 14-306 32-298 (1187)
197 cd06624 STKc_ASK Catalytic dom 100.0 7.6E-42 1.6E-46 289.2 25.5 264 9-300 3-268 (268)
198 cd05102 PTKc_VEGFR3 Catalytic 100.0 2E-42 4.4E-47 302.4 22.7 258 9-296 2-329 (338)
199 cd07852 STKc_MAPK15 Catalytic 100.0 9.9E-43 2.1E-47 304.2 20.3 287 11-302 4-300 (337)
200 cd06638 STKc_myosinIIIA Cataly 100.0 6.1E-42 1.3E-46 292.4 24.7 263 8-300 12-286 (286)
201 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 9.2E-42 2E-46 296.7 26.2 288 11-306 7-297 (328)
202 cd06615 PKc_MEK Catalytic doma 100.0 1.4E-41 2.9E-46 293.3 26.8 279 14-303 1-293 (308)
203 cd06605 PKc_MAPKK Catalytic do 100.0 1.9E-42 4.1E-47 292.3 21.0 256 14-303 1-263 (265)
204 cd06607 STKc_TAO Catalytic dom 100.0 4.9E-42 1.1E-46 296.0 24.0 259 13-305 14-275 (307)
205 cd08215 STKc_Nek Catalytic dom 100.0 1.4E-41 3E-46 285.5 26.0 256 15-300 1-258 (258)
206 cd08219 STKc_Nek3 Catalytic do 100.0 1E-41 2.2E-46 286.3 25.2 252 15-298 1-253 (255)
207 cd06626 STKc_MEKK4 Catalytic d 100.0 1.4E-41 3E-46 286.8 26.1 257 15-300 1-264 (264)
208 cd06631 STKc_YSK4 Catalytic do 100.0 1.5E-41 3.2E-46 286.9 25.9 254 15-300 1-265 (265)
209 cd06614 STKc_PAK Catalytic dom 100.0 7.8E-42 1.7E-46 291.9 24.2 267 11-310 16-283 (286)
210 cd06640 STKc_MST4 Catalytic do 100.0 4.6E-42 9.9E-47 292.0 22.3 259 14-307 4-263 (277)
211 cd06632 STKc_MEKK1_plant Catal 100.0 1.9E-41 4.1E-46 284.9 25.7 254 15-300 1-258 (258)
212 cd05578 STKc_Yank1 Catalytic d 100.0 4.9E-42 1.1E-46 288.7 22.2 252 15-300 1-258 (258)
213 cd07857 STKc_MPK1 Catalytic do 100.0 1E-41 2.2E-46 297.2 24.8 285 15-303 1-298 (332)
214 cd06629 STKc_MAPKKK_Bck1_like 100.0 2E-41 4.4E-46 287.2 25.6 259 15-300 2-272 (272)
215 KOG0669|consensus 100.0 5.8E-44 1.3E-48 280.4 9.0 293 8-303 11-321 (376)
216 cd06623 PKc_MAPKK_plant_like C 100.0 1.7E-41 3.7E-46 286.2 24.5 256 14-303 1-262 (264)
217 cd06659 STKc_PAK6 Catalytic do 100.0 1.4E-41 3E-46 291.7 24.3 260 15-308 22-282 (297)
218 cd06627 STKc_Cdc7_like Catalyt 100.0 3.6E-41 7.8E-46 282.5 26.2 253 15-300 1-254 (254)
219 cd06651 STKc_MEKK3 Catalytic d 100.0 3.1E-41 6.7E-46 285.2 26.0 254 15-301 3-265 (266)
220 cd08228 STKc_Nek6 Catalytic do 100.0 1.5E-41 3.3E-46 287.1 23.9 255 13-296 1-260 (267)
221 cd06616 PKc_MKK4 Catalytic dom 100.0 7E-42 1.5E-46 292.4 22.1 265 13-303 3-273 (288)
222 KOG4236|consensus 100.0 1.1E-43 2.4E-48 304.4 10.7 259 20-308 570-830 (888)
223 KOG2345|consensus 100.0 7.1E-43 1.5E-47 273.3 14.3 264 6-297 13-296 (302)
224 cd05572 STKc_cGK_PKG Catalytic 100.0 1.5E-41 3.3E-46 286.4 23.5 248 22-302 1-257 (262)
225 KOG0983|consensus 100.0 7E-43 1.5E-47 277.2 13.9 267 6-303 84-355 (391)
226 cd06641 STKc_MST3 Catalytic do 100.0 1.9E-41 4.1E-46 288.1 23.9 258 15-307 5-263 (277)
227 cd05609 STKc_MAST Catalytic do 100.0 3.8E-41 8.2E-46 290.2 26.0 258 14-302 1-278 (305)
228 KOG0607|consensus 100.0 5.7E-43 1.2E-47 283.2 13.5 254 20-303 84-367 (463)
229 PHA03390 pk1 serine/threonine- 100.0 4.6E-41 1E-45 284.2 25.8 259 3-302 3-267 (267)
230 cd06652 STKc_MEKK2 Catalytic d 100.0 8.5E-41 1.8E-45 282.3 26.9 255 14-301 2-265 (265)
231 cd06633 STKc_TAO3 Catalytic do 100.0 7.3E-41 1.6E-45 289.3 26.9 253 16-302 23-278 (313)
232 cd06642 STKc_STK25-YSK1 Cataly 100.0 4.8E-42 1E-46 291.8 19.2 255 14-303 4-259 (277)
233 KOG4279|consensus 100.0 1.5E-42 3.3E-47 305.7 16.3 256 20-303 581-838 (1226)
234 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 6.9E-41 1.5E-45 286.1 25.8 264 14-304 1-273 (287)
235 cd06606 STKc_MAPKKK Catalytic 100.0 8.8E-41 1.9E-45 280.7 25.9 255 15-300 1-260 (260)
236 cd05048 PTKc_Ror Catalytic Dom 100.0 2.6E-41 5.7E-46 288.1 23.0 255 12-297 3-279 (283)
237 cd05104 PTKc_Kit Catalytic dom 100.0 3.8E-41 8.1E-46 297.8 24.5 263 5-297 26-370 (375)
238 cd05096 PTKc_DDR1 Catalytic do 100.0 6.5E-41 1.4E-45 288.6 25.2 259 13-295 4-299 (304)
239 cd05577 STKc_GRK Catalytic dom 100.0 3.9E-41 8.4E-46 286.2 23.5 252 22-302 1-259 (277)
240 cd05064 PTKc_EphR_A10 Catalyti 100.0 4.8E-41 1E-45 284.0 23.8 252 12-296 3-260 (266)
241 cd05581 STKc_PDK1 Catalytic do 100.0 3.5E-41 7.6E-46 286.7 23.1 253 14-300 1-280 (280)
242 cd06657 STKc_PAK4 Catalytic do 100.0 5.5E-41 1.2E-45 287.3 24.4 257 19-309 25-282 (292)
243 cd08530 STKc_CNK2-like Catalyt 100.0 5.8E-41 1.3E-45 281.6 24.1 254 15-300 1-256 (256)
244 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 5.7E-41 1.2E-45 286.2 24.3 260 12-303 3-272 (284)
245 cd05122 PKc_STE Catalytic doma 100.0 1.6E-40 3.5E-45 277.9 26.4 252 15-299 1-253 (253)
246 cd06635 STKc_TAO1 Catalytic do 100.0 1.4E-40 3E-45 288.2 26.7 259 14-306 25-286 (317)
247 PHA03210 serine/threonine kina 100.0 1.1E-41 2.5E-46 310.8 20.8 289 11-304 145-461 (501)
248 KOG0577|consensus 100.0 8E-43 1.7E-47 302.5 12.4 256 15-304 27-285 (948)
249 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.7E-40 3.6E-45 279.1 25.4 248 13-296 3-253 (256)
250 cd05052 PTKc_Abl Catalytic dom 100.0 1.5E-40 3.3E-45 280.5 25.2 252 11-296 3-257 (263)
251 cd06634 STKc_TAO2 Catalytic do 100.0 9.4E-41 2E-45 288.1 24.3 258 13-304 14-274 (308)
252 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.7E-40 5.8E-45 279.4 26.3 255 13-296 1-260 (267)
253 cd08229 STKc_Nek7 Catalytic do 100.0 6.9E-41 1.5E-45 283.1 22.5 255 13-296 1-260 (267)
254 cd05579 STKc_MAST_like Catalyt 100.0 9.3E-41 2E-45 281.6 22.6 249 22-302 1-262 (265)
255 cd05106 PTKc_CSF-1R Catalytic 100.0 5.5E-41 1.2E-45 296.5 22.1 260 7-296 31-367 (374)
256 cd05633 STKc_GRK3 Catalytic do 100.0 1.9E-40 4.1E-45 282.3 24.5 249 21-303 1-261 (279)
257 KOG0586|consensus 100.0 6.3E-42 1.4E-46 298.9 15.7 262 8-303 50-312 (596)
258 cd05072 PTKc_Lyn Catalytic dom 100.0 2E-40 4.4E-45 279.3 24.5 252 10-296 2-256 (261)
259 PHA02988 hypothetical protein; 100.0 1.8E-40 3.9E-45 282.7 24.4 241 20-296 26-274 (283)
260 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.8E-40 6E-45 277.8 24.9 249 13-297 3-254 (256)
261 cd05061 PTKc_InsR Catalytic do 100.0 2.5E-40 5.4E-45 282.9 25.0 263 10-303 2-286 (288)
262 cd06618 PKc_MKK7 Catalytic dom 100.0 2.2E-40 4.8E-45 284.2 24.5 266 7-303 8-279 (296)
263 cd05611 STKc_Rim15_like Cataly 100.0 1.6E-40 3.6E-45 279.7 23.3 250 20-303 2-257 (260)
264 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.3E-40 2.9E-45 280.4 22.4 251 12-296 4-256 (261)
265 cd08226 PK_STRAD_beta Pseudoki 100.0 5.5E-41 1.2E-45 292.1 19.9 283 20-304 4-315 (328)
266 cd08222 STKc_Nek11 Catalytic d 100.0 2.6E-40 5.7E-45 278.5 23.1 255 15-300 1-260 (260)
267 cd05068 PTKc_Frk_like Catalyti 100.0 7.2E-40 1.6E-44 276.0 25.7 250 12-296 4-256 (261)
268 KOG0690|consensus 100.0 4.6E-42 1E-46 278.8 11.7 262 8-303 162-430 (516)
269 cd05049 PTKc_Trk Catalytic dom 100.0 2.1E-40 4.6E-45 282.0 22.5 254 12-296 3-276 (280)
270 cd05062 PTKc_IGF-1R Catalytic 100.0 3.2E-40 7E-45 280.6 23.5 256 11-297 3-274 (277)
271 PRK13184 pknD serine/threonine 100.0 2.7E-40 5.9E-45 310.3 25.2 256 13-296 1-284 (932)
272 cd05067 PTKc_Lck_Blk Catalytic 100.0 5.6E-40 1.2E-44 276.5 24.8 251 10-296 2-255 (260)
273 KOG1989|consensus 100.0 1.6E-41 3.4E-46 307.8 16.2 262 11-307 34-317 (738)
274 cd00192 PTKc Catalytic domain 100.0 5.3E-40 1.1E-44 276.5 24.3 247 20-297 1-260 (262)
275 cd05033 PTKc_EphR Catalytic do 100.0 5.9E-40 1.3E-44 277.3 24.4 252 13-297 3-261 (266)
276 cd05090 PTKc_Ror1 Catalytic do 100.0 4.6E-40 1E-44 280.5 23.9 255 12-297 3-279 (283)
277 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.9E-39 4.1E-44 273.9 27.3 254 14-300 2-264 (264)
278 cd05606 STKc_beta_ARK Catalyti 100.0 8.1E-40 1.8E-44 278.2 25.1 249 21-303 1-261 (278)
279 cd05071 PTKc_Src Catalytic dom 100.0 6.9E-40 1.5E-44 276.3 24.3 250 11-296 3-255 (262)
280 cd08216 PK_STRAD Pseudokinase 100.0 4.7E-40 1E-44 284.6 23.8 280 26-307 12-305 (314)
281 cd05059 PTKc_Tec_like Catalyti 100.0 6.2E-40 1.3E-44 275.6 23.8 249 13-297 3-254 (256)
282 KOG0584|consensus 100.0 1.3E-41 2.9E-46 297.3 13.9 252 18-303 44-302 (632)
283 cd05036 PTKc_ALK_LTK Catalytic 100.0 7.1E-40 1.5E-44 278.5 24.2 256 12-297 4-274 (277)
284 cd05084 PTKc_Fes Catalytic dom 100.0 5.2E-40 1.1E-44 275.4 23.0 244 20-296 1-248 (252)
285 cd05093 PTKc_TrkB Catalytic do 100.0 8.1E-40 1.8E-44 279.7 24.5 253 12-296 3-274 (288)
286 cd05123 STKc_AGC Catalytic dom 100.0 8E-40 1.7E-44 273.8 23.7 245 22-300 1-250 (250)
287 PF07714 Pkinase_Tyr: Protein 100.0 2.2E-40 4.7E-45 278.8 20.2 248 17-296 2-257 (259)
288 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.2E-39 2.6E-44 274.6 24.4 250 11-296 3-255 (260)
289 cd05034 PTKc_Src_like Catalyti 100.0 1.9E-39 4.2E-44 273.3 25.4 252 10-296 2-256 (261)
290 cd05032 PTKc_InsR_like Catalyt 100.0 8.6E-40 1.9E-44 277.9 23.2 256 10-296 2-273 (277)
291 cd05053 PTKc_FGFR Catalytic do 100.0 6.1E-40 1.3E-44 281.1 22.4 259 8-297 6-287 (293)
292 cd05116 PTKc_Syk Catalytic dom 100.0 1.1E-39 2.4E-44 274.2 23.5 242 21-296 2-250 (257)
293 cd05091 PTKc_Ror2 Catalytic do 100.0 6.3E-40 1.4E-44 279.6 21.7 254 12-296 3-278 (283)
294 KOG0612|consensus 100.0 2.6E-41 5.7E-46 311.5 13.7 265 8-302 69-343 (1317)
295 KOG1187|consensus 100.0 7.6E-40 1.6E-44 284.3 21.6 270 5-296 66-347 (361)
296 cd05069 PTKc_Yes Catalytic dom 100.0 4.5E-39 9.7E-44 271.1 25.6 249 12-296 4-255 (260)
297 cd05088 PTKc_Tie2 Catalytic do 100.0 1E-39 2.2E-44 280.9 22.2 255 11-297 4-276 (303)
298 cd05108 PTKc_EGFR Catalytic do 100.0 1.7E-39 3.6E-44 281.3 23.6 251 13-297 6-264 (316)
299 cd05094 PTKc_TrkC Catalytic do 100.0 2.5E-39 5.4E-44 277.1 24.3 253 12-296 3-277 (291)
300 cd05089 PTKc_Tie1 Catalytic do 100.0 2.1E-39 4.5E-44 278.4 23.6 253 13-297 1-271 (297)
301 cd05075 PTKc_Axl Catalytic dom 100.0 2.2E-39 4.8E-44 274.7 23.4 252 16-297 1-267 (272)
302 KOG4721|consensus 100.0 2.4E-41 5.1E-46 292.3 11.3 252 6-302 116-369 (904)
303 KOG0603|consensus 100.0 2.5E-40 5.5E-45 290.3 17.8 250 12-306 320-572 (612)
304 cd05035 PTKc_Axl_like Catalyti 100.0 2.3E-39 4.9E-44 274.6 23.1 252 16-297 1-268 (273)
305 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.1E-39 4.6E-44 287.7 23.8 261 6-296 29-392 (400)
306 cd05039 PTKc_Csk_like Catalyti 100.0 5E-39 1.1E-43 270.1 24.7 247 11-296 3-251 (256)
307 cd05066 PTKc_EphR_A Catalytic 100.0 3.1E-39 6.6E-44 273.1 23.5 251 13-296 3-261 (267)
308 cd05055 PTKc_PDGFR Catalytic d 100.0 4.3E-39 9.3E-44 276.9 24.8 258 8-296 29-296 (302)
309 cd05092 PTKc_TrkA Catalytic do 100.0 3.2E-39 7E-44 274.9 23.6 253 12-296 3-276 (280)
310 cd05054 PTKc_VEGFR Catalytic d 100.0 1.3E-39 2.8E-44 284.1 21.3 256 12-297 5-329 (337)
311 cd05082 PTKc_Csk Catalytic dom 100.0 7.1E-39 1.5E-43 269.2 25.1 247 10-296 2-251 (256)
312 cd05060 PTKc_Syk_like Catalyti 100.0 4.8E-39 1E-43 270.4 24.0 242 20-296 1-250 (257)
313 cd05109 PTKc_HER2 Catalytic do 100.0 4.8E-39 1E-43 273.6 24.1 251 12-296 5-263 (279)
314 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.9E-39 8.4E-44 278.0 23.8 258 8-296 12-294 (307)
315 cd05073 PTKc_Hck Catalytic dom 100.0 7.1E-39 1.5E-43 269.8 24.7 251 10-296 2-255 (260)
316 cd05112 PTKc_Itk Catalytic dom 100.0 1.1E-38 2.3E-43 268.1 25.5 249 13-297 3-254 (256)
317 KOG0671|consensus 100.0 3.4E-41 7.4E-46 278.8 10.1 283 13-303 88-412 (415)
318 cd05051 PTKc_DDR Catalytic dom 100.0 5.9E-39 1.3E-43 275.4 24.4 261 12-296 3-292 (296)
319 cd05063 PTKc_EphR_A2 Catalytic 100.0 7.2E-39 1.6E-43 271.0 24.4 252 12-296 3-262 (268)
320 cd05613 STKc_MSK1_N N-terminal 100.0 8.7E-39 1.9E-43 273.6 25.1 261 15-304 1-275 (290)
321 cd05065 PTKc_EphR_B Catalytic 100.0 5.6E-39 1.2E-43 271.8 23.5 252 12-296 2-263 (269)
322 KOG1035|consensus 100.0 3E-40 6.5E-45 306.6 16.9 260 11-302 476-876 (1351)
323 cd05107 PTKc_PDGFR_beta Cataly 100.0 7.5E-39 1.6E-43 284.1 24.6 264 4-297 27-395 (401)
324 cd05111 PTK_HER3 Pseudokinase 100.0 1E-38 2.2E-43 271.7 24.4 251 12-296 5-263 (279)
325 KOG0986|consensus 100.0 1.8E-40 3.8E-45 279.9 12.9 265 9-302 180-451 (591)
326 cd05045 PTKc_RET Catalytic dom 100.0 8E-39 1.7E-43 273.8 23.4 251 15-296 1-281 (290)
327 cd05115 PTKc_Zap-70 Catalytic 100.0 1.3E-38 2.9E-43 267.7 24.2 242 21-296 2-250 (257)
328 cd05041 PTKc_Fes_like Catalyti 100.0 1E-38 2.3E-43 267.3 23.3 243 20-296 1-247 (251)
329 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.4E-38 3.1E-43 275.3 24.8 257 9-296 7-288 (314)
330 cd05097 PTKc_DDR_like Catalyti 100.0 1.1E-38 2.4E-43 273.6 23.4 260 13-296 4-291 (295)
331 cd05040 PTKc_Ack_like Catalyti 100.0 1.7E-38 3.6E-43 267.0 23.9 245 20-296 1-253 (257)
332 cd05043 PTK_Ryk Pseudokinase d 100.0 1.3E-38 2.9E-43 271.1 23.5 255 11-296 3-271 (280)
333 cd08528 STKc_Nek10 Catalytic d 100.0 1.4E-38 2.9E-43 269.4 23.4 253 15-297 1-266 (269)
334 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.6E-38 3.5E-43 273.7 24.0 259 8-297 9-292 (304)
335 cd05050 PTKc_Musk Catalytic do 100.0 1.2E-38 2.6E-43 272.4 23.0 254 12-296 3-284 (288)
336 cd05057 PTKc_EGFR_like Catalyt 100.0 2.3E-38 5E-43 269.5 24.5 251 12-296 5-263 (279)
337 smart00219 TyrKc Tyrosine kina 100.0 2.5E-38 5.3E-43 265.9 24.1 249 16-296 1-256 (258)
338 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.6E-38 3.4E-43 277.3 23.6 260 7-297 5-289 (334)
339 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4.6E-39 9.9E-44 270.7 18.9 240 20-297 1-256 (258)
340 cd05046 PTK_CCK4 Pseudokinase 100.0 3.2E-38 7E-43 268.0 24.3 255 13-297 4-272 (275)
341 cd05095 PTKc_DDR2 Catalytic do 100.0 3.4E-38 7.3E-43 270.7 24.5 259 14-296 5-292 (296)
342 cd05083 PTKc_Chk Catalytic dom 100.0 3.5E-38 7.5E-43 264.7 23.5 245 11-296 3-249 (254)
343 cd05056 PTKc_FAK Catalytic dom 100.0 3.1E-38 6.7E-43 267.4 23.4 250 13-296 5-260 (270)
344 cd05085 PTKc_Fer Catalytic dom 100.0 4.6E-38 9.9E-43 263.3 24.1 243 20-296 1-246 (250)
345 cd05583 STKc_MSK_N N-terminal 100.0 2.5E-38 5.5E-43 270.4 22.7 256 15-303 1-272 (288)
346 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2E-38 4.3E-43 269.1 21.6 239 21-297 2-272 (274)
347 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 4.3E-38 9.3E-43 265.3 23.2 240 20-297 1-260 (262)
348 KOG1026|consensus 100.0 1.8E-39 4E-44 293.4 15.5 256 9-295 481-756 (774)
349 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 4.1E-38 9E-43 268.6 23.1 266 14-297 4-279 (284)
350 cd05103 PTKc_VEGFR2 Catalytic 100.0 3E-38 6.5E-43 276.4 22.5 256 12-297 5-335 (343)
351 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 6.9E-38 1.5E-42 267.1 23.7 263 14-296 3-276 (283)
352 cd05042 PTKc_Aatyk Catalytic d 100.0 7.7E-38 1.7E-42 264.8 23.6 251 20-296 1-265 (269)
353 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.1E-37 2.4E-42 265.9 24.6 265 14-296 4-278 (284)
354 cd05047 PTKc_Tie Catalytic dom 100.0 8.9E-38 1.9E-42 264.6 23.1 245 20-296 1-263 (270)
355 cd05610 STKc_MASTL Catalytic d 100.0 1.1E-37 2.5E-42 292.9 26.0 149 12-164 2-152 (669)
356 cd05044 PTKc_c-ros Catalytic d 100.0 5.8E-38 1.3E-42 265.5 21.6 247 20-296 1-265 (269)
357 KOG1290|consensus 100.0 2.7E-38 5.8E-43 268.8 19.4 285 14-306 78-559 (590)
358 KOG4645|consensus 100.0 4.3E-40 9.3E-45 307.1 9.3 262 12-305 1233-1502(1509)
359 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.1E-37 4.6E-42 262.1 24.5 251 20-296 1-265 (269)
360 KOG1006|consensus 100.0 1.2E-40 2.7E-45 263.4 3.9 265 12-302 62-332 (361)
361 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.3E-37 2.8E-42 261.9 22.5 237 20-296 1-256 (259)
362 cd05110 PTKc_HER4 Catalytic do 100.0 1.6E-37 3.4E-42 267.4 23.1 252 12-297 5-264 (303)
363 cd05058 PTKc_Met_Ron Catalytic 100.0 1.9E-37 4.1E-42 261.4 22.7 244 20-296 1-254 (262)
364 KOG0668|consensus 100.0 2E-39 4.4E-44 251.4 9.5 283 7-302 32-327 (338)
365 PHA02882 putative serine/threo 100.0 4.1E-37 8.9E-42 263.6 24.6 255 14-296 12-291 (294)
366 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.9E-37 4.2E-42 264.3 22.3 255 13-296 3-278 (284)
367 cd05576 STKc_RPK118_like Catal 100.0 7.8E-38 1.7E-42 259.9 18.1 228 25-300 4-237 (237)
368 cd05074 PTKc_Tyro3 Catalytic d 100.0 4.8E-37 1E-41 260.4 22.4 251 16-296 1-267 (273)
369 KOG0194|consensus 100.0 4.9E-38 1.1E-42 275.1 16.2 257 8-296 151-415 (474)
370 KOG0670|consensus 100.0 9.7E-39 2.1E-43 273.4 10.7 284 13-302 431-751 (752)
371 KOG1095|consensus 100.0 2.4E-37 5.1E-42 289.1 20.5 253 13-296 691-956 (1025)
372 KOG0696|consensus 100.0 7.1E-38 1.5E-42 261.7 13.9 259 10-302 345-611 (683)
373 KOG0587|consensus 100.0 3.8E-37 8.2E-42 277.9 19.4 266 7-303 12-288 (953)
374 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.1E-36 8.8E-41 254.2 24.6 250 20-296 1-264 (268)
375 smart00220 S_TKc Serine/Threon 100.0 4.6E-36 1E-40 249.4 24.0 243 26-300 1-244 (244)
376 KOG0614|consensus 100.0 8.9E-39 1.9E-43 273.0 7.8 258 12-302 418-682 (732)
377 PLN03225 Serine/threonine-prot 100.0 2.4E-36 5.1E-41 277.7 22.5 279 8-304 126-457 (566)
378 KOG4250|consensus 100.0 1.4E-37 3.1E-42 275.4 12.9 269 14-289 13-296 (732)
379 KOG1151|consensus 100.0 1.2E-37 2.6E-42 262.6 10.1 265 13-302 462-746 (775)
380 KOG0695|consensus 100.0 1E-36 2.2E-41 248.9 14.8 261 8-302 244-521 (593)
381 KOG0196|consensus 100.0 8.2E-37 1.8E-41 272.5 12.1 259 12-303 627-895 (996)
382 KOG4257|consensus 100.0 3.3E-36 7.1E-41 262.9 14.8 248 14-296 389-644 (974)
383 PLN03224 probable serine/threo 100.0 1.2E-34 2.5E-39 260.5 24.0 279 7-302 138-505 (507)
384 KOG0199|consensus 100.0 3.8E-36 8.3E-41 265.4 13.9 259 11-302 107-373 (1039)
385 KOG0664|consensus 100.0 1.2E-37 2.7E-42 247.7 2.8 277 14-303 53-349 (449)
386 KOG1094|consensus 100.0 2.7E-35 5.8E-40 255.4 17.0 257 13-295 537-798 (807)
387 KOG0608|consensus 100.0 6.5E-36 1.4E-40 261.5 12.9 258 15-303 630-934 (1034)
388 KOG0665|consensus 100.0 4.6E-36 1E-40 243.1 10.8 280 13-301 16-314 (369)
389 KOG4278|consensus 100.0 6.4E-35 1.4E-39 255.0 16.7 255 7-295 260-517 (1157)
390 KOG1027|consensus 100.0 4.2E-36 9.1E-41 269.9 9.5 248 19-302 514-772 (903)
391 KOG1167|consensus 100.0 3E-35 6.6E-40 246.6 11.3 287 7-303 29-387 (418)
392 KOG1152|consensus 100.0 1.2E-34 2.5E-39 251.2 12.1 206 8-219 555-771 (772)
393 PLN00113 leucine-rich repeat r 100.0 1.5E-33 3.3E-38 277.5 20.2 258 8-297 684-947 (968)
394 KOG0984|consensus 100.0 1.8E-34 3.9E-39 220.6 10.4 215 14-231 46-267 (282)
395 KOG2052|consensus 100.0 1.1E-32 2.5E-37 232.3 17.0 248 13-295 210-497 (513)
396 KOG0576|consensus 100.0 7.1E-34 1.5E-38 249.9 8.4 263 11-303 12-277 (829)
397 KOG3653|consensus 100.0 5.2E-33 1.1E-37 236.0 11.3 246 12-292 208-494 (534)
398 KOG1025|consensus 100.0 2.6E-32 5.6E-37 245.1 15.7 246 17-296 699-952 (1177)
399 cd00180 PKc Catalytic domain o 100.0 7.5E-31 1.6E-35 213.1 22.6 213 22-298 1-215 (215)
400 KOG0200|consensus 100.0 4.2E-31 9E-36 245.2 22.6 258 8-296 290-574 (609)
401 KOG1345|consensus 100.0 1.5E-31 3.2E-36 212.6 10.5 250 11-295 21-285 (378)
402 smart00221 STYKc Protein kinas 100.0 5.6E-29 1.2E-33 204.6 20.9 211 16-230 1-215 (225)
403 KOG1024|consensus 100.0 5.5E-30 1.2E-34 213.2 13.8 255 11-296 281-550 (563)
404 PLN00181 protein SPA1-RELATED; 100.0 3.8E-30 8.2E-35 247.5 12.4 202 69-303 28-271 (793)
405 smart00750 KIND kinase non-cat 100.0 4.9E-28 1.1E-32 191.7 13.0 167 97-302 1-170 (176)
406 KOG1164|consensus 99.9 2.5E-25 5.5E-30 192.5 23.8 254 15-296 19-292 (322)
407 KOG1163|consensus 99.9 7.8E-26 1.7E-30 177.3 17.6 255 8-290 9-273 (341)
408 KOG0590|consensus 99.9 1.9E-27 4.1E-32 218.4 5.8 263 17-303 321-591 (601)
409 KOG1165|consensus 99.9 6.8E-25 1.5E-29 179.5 16.7 217 8-231 22-250 (449)
410 PF14531 Kinase-like: Kinase-l 99.9 2.6E-25 5.5E-30 184.5 10.8 237 15-288 13-288 (288)
411 COG0515 SPS1 Serine/threonine 99.9 8.5E-23 1.8E-27 177.2 26.5 265 16-303 2-281 (384)
412 PRK09188 serine/threonine prot 99.9 4E-24 8.6E-29 184.9 14.5 172 4-189 8-193 (365)
413 KOG0195|consensus 99.9 6.9E-25 1.5E-29 175.0 8.1 247 11-295 187-440 (448)
414 KOG0603|consensus 99.9 4.8E-24 1E-28 188.2 5.7 239 22-303 2-249 (612)
415 cd05147 RIO1_euk RIO kinase fa 99.9 1E-22 2.3E-27 162.3 12.2 141 19-167 2-168 (190)
416 KOG1240|consensus 99.9 1.6E-23 3.5E-28 194.3 8.5 248 15-297 24-291 (1431)
417 PRK10359 lipopolysaccharide co 99.9 3.8E-22 8.2E-27 160.9 11.5 171 13-211 30-216 (232)
418 KOG4158|consensus 99.9 2.8E-21 6E-26 162.1 14.9 191 71-292 274-505 (598)
419 cd05145 RIO1_like RIO kinase f 99.9 2.3E-21 5.1E-26 155.0 13.0 141 18-167 1-168 (190)
420 KOG0606|consensus 99.9 1.6E-21 3.5E-26 180.7 11.8 223 12-303 81-321 (1205)
421 KOG1166|consensus 99.8 3.1E-20 6.6E-25 174.8 13.6 196 10-215 694-901 (974)
422 PRK12274 serine/threonine prot 99.8 1.1E-19 2.3E-24 143.7 14.1 187 17-220 5-210 (218)
423 KOG1023|consensus 99.8 3E-19 6.5E-24 157.6 13.5 204 68-296 2-219 (484)
424 smart00090 RIO RIO-like kinase 99.8 4.7E-19 1E-23 146.0 12.6 148 12-168 26-200 (237)
425 PRK10345 hypothetical protein; 99.8 1.2E-18 2.6E-23 140.2 14.5 137 16-163 4-156 (210)
426 PRK14879 serine/threonine prot 99.8 8.6E-18 1.9E-22 137.0 13.5 135 20-165 2-143 (211)
427 KOG1033|consensus 99.8 6.5E-19 1.4E-23 153.0 4.9 181 86-301 329-516 (516)
428 KOG0590|consensus 99.7 1.3E-19 2.8E-24 166.9 -0.4 264 13-302 19-291 (601)
429 cd05144 RIO2_C RIO kinase fami 99.7 3.5E-17 7.6E-22 131.9 11.7 139 15-168 16-177 (198)
430 TIGR03724 arch_bud32 Kae1-asso 99.7 5.4E-17 1.2E-21 131.0 12.7 131 21-165 1-138 (199)
431 PRK09605 bifunctional UGMP fam 99.7 1.6E-16 3.5E-21 146.6 13.5 137 15-166 334-477 (535)
432 cd05119 RIO RIO kinase family, 99.7 5.2E-16 1.1E-20 124.0 12.2 137 19-167 2-165 (187)
433 KOG0601|consensus 99.7 1.5E-16 3.4E-21 140.7 8.2 255 14-302 114-384 (524)
434 PRK01723 3-deoxy-D-manno-octul 99.6 4.2E-15 9.1E-20 122.8 13.7 136 20-166 37-192 (239)
435 cd05120 APH_ChoK_like Aminogly 99.6 5.2E-15 1.1E-19 113.7 11.2 132 18-165 2-138 (155)
436 KOG1243|consensus 99.6 2.1E-14 4.6E-19 128.7 14.6 169 32-213 30-199 (690)
437 KOG1266|consensus 99.5 1.1E-15 2.5E-20 125.7 1.1 201 67-302 121-336 (458)
438 cd05146 RIO3_euk RIO kinase fa 99.5 1.3E-13 2.9E-18 109.0 11.9 139 19-167 2-175 (197)
439 TIGR01982 UbiB 2-polyprenylphe 99.5 7.4E-13 1.6E-17 118.7 12.5 153 8-168 112-309 (437)
440 KOG3087|consensus 99.4 2E-12 4.4E-17 98.6 12.4 146 18-166 11-166 (229)
441 KOG0606|consensus 99.4 9.9E-14 2.1E-18 129.8 4.6 264 9-303 799-1098(1205)
442 cd05151 ChoK Choline Kinase (C 99.4 1.3E-12 2.7E-17 102.6 10.3 127 19-165 3-136 (170)
443 KOG3741|consensus 99.4 2.3E-11 5E-16 106.5 18.8 231 9-296 268-520 (655)
444 PRK04750 ubiB putative ubiquin 99.4 1.5E-13 3.2E-18 124.7 5.4 153 7-168 113-316 (537)
445 KOG0601|consensus 99.3 8.5E-13 1.8E-17 117.3 4.3 257 9-302 260-519 (524)
446 COG3642 Mn2+-dependent serine/ 99.3 2.2E-11 4.7E-16 93.4 11.3 133 20-166 2-141 (204)
447 PRK15123 lipopolysaccharide co 99.2 3.9E-10 8.4E-15 94.3 14.1 141 22-165 30-194 (268)
448 cd05154 ACAD10_11_like Acyl-Co 99.2 2.9E-10 6.4E-15 93.1 12.2 141 19-165 3-206 (223)
449 COG4248 Uncharacterized protei 99.2 1.7E-09 3.6E-14 92.9 16.7 251 18-293 15-292 (637)
450 KOG2137|consensus 99.2 1.1E-11 2.3E-16 112.0 3.6 154 123-303 107-271 (700)
451 PF01163 RIO1: RIO1 family; I 99.2 5E-10 1.1E-14 88.4 11.1 128 29-167 1-157 (188)
452 COG0478 RIO-like serine/threon 99.1 1E-09 2.2E-14 89.4 10.2 139 17-168 94-254 (304)
453 PF06293 Kdo: Lipopolysacchari 99.0 8.9E-09 1.9E-13 83.3 13.8 106 58-166 56-171 (206)
454 PRK09902 hypothetical protein; 99.0 1.8E-08 3.8E-13 80.2 14.3 141 23-166 27-180 (216)
455 PF06176 WaaY: Lipopolysacchar 98.8 2.1E-07 4.5E-12 74.4 12.9 135 14-165 31-183 (229)
456 COG1718 RIO1 Serine/threonine 98.7 3.9E-08 8.4E-13 79.4 7.2 138 20-168 54-218 (268)
457 TIGR02172 Fb_sc_TIGR02172 Fibr 98.6 1E-06 2.2E-11 72.2 12.5 71 20-98 7-79 (226)
458 COG0661 AarF Predicted unusual 98.5 2.9E-07 6.2E-12 83.6 7.7 153 8-168 120-317 (517)
459 KOG1035|consensus 98.4 1.5E-06 3.3E-11 83.7 10.4 204 62-308 231-445 (1351)
460 COG2112 Predicted Ser/Thr prot 98.4 3.1E-06 6.7E-11 64.9 9.8 130 17-167 25-157 (201)
461 cd05150 APH Aminoglycoside 3'- 98.3 1.6E-05 3.4E-10 66.2 12.7 71 20-97 4-76 (244)
462 PF01636 APH: Phosphotransfera 98.3 1.7E-05 3.7E-10 65.3 12.8 73 19-97 2-79 (239)
463 PF10707 YrbL-PhoP_reg: PhoP r 98.2 1.7E-05 3.8E-10 63.2 11.1 133 19-162 6-169 (199)
464 PLN02876 acyl-CoA dehydrogenas 98.2 2.3E-05 5E-10 76.5 13.9 80 18-98 42-129 (822)
465 PF13095 FTA2: Kinetochore Sim 98.1 0.00013 2.9E-09 57.8 12.7 128 13-163 36-206 (207)
466 KOG2270|consensus 98.1 6.6E-05 1.4E-09 64.4 11.2 144 18-168 148-316 (520)
467 cd05157 ETNK_euk Ethanolamine 97.9 0.00025 5.5E-09 58.5 12.9 72 19-97 3-76 (235)
468 KOG1235|consensus 97.9 0.00018 3.9E-09 65.6 12.7 154 6-168 154-357 (538)
469 KOG0576|consensus 97.9 2E-06 4.4E-11 78.0 0.2 248 13-302 241-489 (829)
470 cd05153 HomoserineK_II Homoser 97.9 0.00042 9E-09 59.4 13.4 149 9-165 4-205 (296)
471 cd05155 APH_ChoK_like_1 Unchar 97.9 0.00017 3.7E-09 59.6 10.3 70 19-97 2-78 (235)
472 PRK05231 homoserine kinase; Pr 97.8 0.00068 1.5E-08 58.8 13.8 88 4-98 7-107 (319)
473 PRK09550 mtnK methylthioribose 97.8 0.00077 1.7E-08 59.7 14.0 77 19-97 31-115 (401)
474 KOG2268|consensus 97.8 2.3E-05 5E-10 66.1 4.3 136 16-166 94-252 (465)
475 PRK10593 hypothetical protein; 97.7 0.00093 2E-08 57.3 13.3 75 17-97 17-97 (297)
476 TIGR02721 ycfN_thiK thiamine k 97.7 0.00035 7.6E-09 58.6 10.5 136 21-166 3-176 (256)
477 TIGR00938 thrB_alt homoserine 97.7 0.00057 1.2E-08 59.0 12.1 152 7-165 10-217 (307)
478 PF12260 PIP49_C: Protein-kina 97.7 0.00016 3.4E-09 57.4 7.3 101 61-166 7-112 (188)
479 cd05156 ChoK_euk Choline Kinas 97.4 0.0028 6E-08 54.5 11.4 72 19-97 3-81 (302)
480 PLN02421 phosphotransferase, a 97.3 0.0044 9.6E-08 54.0 11.8 143 17-166 17-214 (330)
481 PLN02236 choline kinase 97.3 0.0064 1.4E-07 53.3 12.5 143 17-166 39-232 (344)
482 PLN02756 S-methyl-5-thioribose 97.2 0.0075 1.6E-07 53.5 12.5 76 18-97 36-119 (418)
483 COG3173 Predicted aminoglycosi 97.2 0.0092 2E-07 51.2 12.4 148 16-167 27-230 (321)
484 TIGR01767 MTRK 5-methylthiorib 97.2 0.0078 1.7E-07 52.5 11.5 76 21-97 2-84 (370)
485 PRK12396 5-methylribose kinase 97.1 0.0038 8.2E-08 55.1 9.7 78 19-97 34-117 (409)
486 cd05152 MPH2' Macrolide 2'-Pho 97.1 0.0047 1E-07 52.3 9.8 32 135-166 186-217 (276)
487 KOG1093|consensus 97.1 0.0019 4.1E-08 58.1 7.3 173 58-303 27-200 (725)
488 TIGR02906 spore_CotS spore coa 96.8 0.067 1.5E-06 46.1 14.4 30 134-165 187-216 (313)
489 KOG1826|consensus 96.7 0.00018 3.9E-09 72.0 -2.2 263 8-303 1223-1498(2724)
490 TIGR02904 spore_ysxE spore coa 96.7 0.031 6.7E-07 48.3 11.7 30 135-165 197-226 (309)
491 PRK11768 serine/threonine prot 96.6 0.11 2.4E-06 45.2 14.7 88 5-97 12-111 (325)
492 PTZ00384 choline kinase; Provi 96.6 0.051 1.1E-06 48.3 12.7 74 17-97 53-133 (383)
493 PF03881 Fructosamin_kin: Fruc 96.6 0.026 5.6E-07 48.0 10.4 74 17-97 20-96 (288)
494 COG5072 ALK1 Serine/threonine 96.3 0.026 5.6E-07 49.0 8.1 103 86-204 299-402 (488)
495 PTZ00296 choline kinase; Provi 95.5 0.25 5.4E-06 44.9 11.6 73 18-97 109-190 (442)
496 COG3231 Aph Aminoglycoside pho 94.6 0.47 1E-05 38.5 9.4 130 20-165 24-215 (266)
497 COG0510 ycfN Thiamine kinase a 94.5 0.076 1.6E-06 44.8 5.2 31 135-166 154-184 (269)
498 COG3001 Uncharacterized protei 94.0 0.36 7.9E-06 39.4 7.8 72 19-97 21-95 (286)
499 KOG1236|consensus 93.9 0.34 7.5E-06 43.0 7.9 61 88-152 320-382 (565)
500 PRK10271 thiK thiamine kinase; 93.6 0.072 1.6E-06 42.0 3.1 31 135-167 78-108 (188)
No 1
>KOG0659|consensus
Probab=100.00 E-value=4.6e-56 Score=350.50 Aligned_cols=285 Identities=52% Similarity=0.900 Sum_probs=264.6
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
.+|..++.||+|.+|.||+|++..+|+.||+|.++..+..........+|+..|+.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 57999999999999999999999999999999999988887788899999999999999999999999999999999999
Q ss_pred ccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccc
Q psy6391 94 FMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIY 173 (313)
Q Consensus 94 ~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~ 173 (313)
|++.+|...+.. +...++...++.++.+++.|++|||++.|+|+||||.|+|++.+|. +||+|||++...+.+....
T Consensus 82 fm~tdLe~vIkd--~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~-lKiADFGLAr~f~~p~~~~ 158 (318)
T KOG0659|consen 82 FMPTDLEVVIKD--KNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQ-LKIADFGLARFFGSPNRIQ 158 (318)
T ss_pred eccccHHHHhcc--cccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCc-EEeecccchhccCCCCccc
Confidence 999999999876 5667999999999999999999999999999999999999999987 9999999999999888888
Q ss_pred ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcccc
Q psy6391 174 THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT 253 (313)
Q Consensus 174 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (313)
...+-|.+|.|||.+.+.+.++...|+||.||++.||+-+.+.|.+.++.+++..+++..+.|.++.|+++..++++...
T Consensus 159 ~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~ 238 (318)
T KOG0659|consen 159 THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKI 238 (318)
T ss_pred ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999885432
Q ss_pred CCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 254 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
- .+...-++..++..++++.+|+.+||..||.+|+++.|+|+|+||++
T Consensus 239 ~-~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~ 286 (318)
T KOG0659|consen 239 Q-QFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS 286 (318)
T ss_pred h-cCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence 2 23333334466789999999999999999999999999999999997
No 2
>KOG0615|consensus
Probab=100.00 E-value=3.4e-57 Score=376.61 Aligned_cols=267 Identities=30% Similarity=0.495 Sum_probs=226.5
Q ss_pred hhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCC-----CCchhHHHHHHHHhhcCCCCceeeceeEEe
Q psy6391 10 KSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDE-----GIPATAIREISVLKELNHPNIVQLHDTMIE 84 (313)
Q Consensus 10 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 84 (313)
....+.|.+.+.||.|+||.|-+|..+.+++.||+|++.+..... +....+.+|+++|+.++||+||+++++|+.
T Consensus 168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~ 247 (475)
T KOG0615|consen 168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV 247 (475)
T ss_pred chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec
Confidence 345667888899999999999999999999999999998775332 123456799999999999999999999999
Q ss_pred CcEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecC--CCeEEEecCCC
Q psy6391 85 NYRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAK--SNIVKVADFGL 162 (313)
Q Consensus 85 ~~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~--~~~~~l~df~~ 162 (313)
++..|+||||++|+ +++++.-.++.+.+..-+.+++|++.|+.|||++||+|+||||+|||+..+ .-.+||+|||+
T Consensus 248 ~ds~YmVlE~v~GG--eLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 248 PDSSYMVLEYVEGG--ELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred CCceEEEEEEecCc--cHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccch
Confidence 99999999999975 555555566778999999999999999999999999999999999999665 23599999999
Q ss_pred ccccCCCCcccccccccccccchhhhcCCC--CCCcchhHhHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHhcCCCCCC
Q psy6391 163 ARAFGVPVRIYTHEVVTLWYRAPEVLLGSQ--RYSCPVDVWSIGCIFAEIATRKPLFQGDSEID-QLFRIFRVLTTPTED 239 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~--~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~-~~~~~~~~~~~~~~~ 239 (313)
|+..+ ..+.+...+||+.|.|||++.+.+ .+..+.|||||||++|-+++|.+||....... ..+++.++-....+.
T Consensus 326 AK~~g-~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~ 404 (475)
T KOG0615|consen 326 AKVSG-EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPL 404 (475)
T ss_pred hhccc-cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccCh
Confidence 99987 556777889999999999996543 34458899999999999999999999876655 666666644333333
Q ss_pred CCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCC
Q psy6391 240 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 304 (313)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~ 304 (313)
.| .+++++..+||.+||..||++|||++|+|+||||+...
T Consensus 405 ~w-------------------------~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 405 QW-------------------------DRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP 444 (475)
T ss_pred hh-------------------------hhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence 33 35899999999999999999999999999999999643
No 3
>KOG0575|consensus
Probab=100.00 E-value=3.4e-55 Score=381.46 Aligned_cols=267 Identities=27% Similarity=0.436 Sum_probs=232.4
Q ss_pred hhhhhhcc-----ceeeeeeccccceEEEEEEeCcCCcEEEEEEecccC-CCCCCchhHHHHHHHHhhcCCCCceeecee
Q psy6391 8 DVKSRLED-----YEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEN-DDEGIPATAIREISVLKELNHPNIVQLHDT 81 (313)
Q Consensus 8 ~~~~~~~~-----y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~ 81 (313)
+++..+.+ |...+.||+|+|+.||.+++..+|+.||+|++.+.. ......+++.+|+++.++++|||||+++++
T Consensus 7 ~ip~~i~D~~~~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~ 86 (592)
T KOG0575|consen 7 EIPEVIEDPRSKRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHF 86 (592)
T ss_pred CCCCeeecCCcceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeE
Confidence 44455555 999999999999999999998899999999997644 344456889999999999999999999999
Q ss_pred EEeCcEEEEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecC
Q psy6391 82 MIENYRLYLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADF 160 (313)
Q Consensus 82 ~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df 160 (313)
|+|.+++|+|.|.|. ++|..++.. .+++++.+++.+.+||+.||.|||+.+|+|+|||..|++++.+-+ +||+||
T Consensus 87 FEDs~nVYivLELC~~~sL~el~Kr---rk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~-VKIgDF 162 (592)
T KOG0575|consen 87 FEDSNNVYIVLELCHRGSLMELLKR---RKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMN-VKIGDF 162 (592)
T ss_pred eecCCceEEEEEecCCccHHHHHHh---cCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCc-EEeccc
Confidence 999999999999998 477666663 456999999999999999999999999999999999999999877 999999
Q ss_pred CCccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCC
Q psy6391 161 GLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDN 240 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
|+|+.+..+...-...+||+.|.|||++...+ .+..+||||+||+||-|+.|++||....-.+.+.++....-..+
T Consensus 163 GLAt~le~~~Erk~TlCGTPNYIAPEVl~k~g-HsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P--- 238 (592)
T KOG0575|consen 163 GLATQLEYDGERKKTLCGTPNYIAPEVLNKSG-HSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMP--- 238 (592)
T ss_pred ceeeeecCcccccceecCCCcccChhHhccCC-CCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccc---
Confidence 99999986655556679999999999998655 79999999999999999999999999888888887765322211
Q ss_pred CCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCCC
Q psy6391 241 WPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 308 (313)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~~ 308 (313)
..+|.++.+||.++|++||.+|||++++|.|+||+....+.+
T Consensus 239 --------------------------~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~p~~ 280 (592)
T KOG0575|consen 239 --------------------------SHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSGFTPAR 280 (592)
T ss_pred --------------------------cccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCCCcCCC
Confidence 148999999999999999999999999999999977544433
No 4
>KOG0593|consensus
Probab=100.00 E-value=4.3e-56 Score=356.71 Aligned_cols=287 Identities=41% Similarity=0.720 Sum_probs=250.5
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
|+.|+.+.++|+|++|+||+++++.+|+.||||.+.....+....+-.++|+.+|++++|+|+|.++++|......++|+
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 57899999999999999999999999999999999887777777778889999999999999999999999999999999
Q ss_pred eccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 93 EFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 93 e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
||++.++.+.++..+.+ ++...++.+++|++.|+.|+|+++++|+||||+|||++..|. +||||||+|.....+...
T Consensus 81 E~~dhTvL~eLe~~p~G--~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gv-vKLCDFGFAR~L~~pgd~ 157 (396)
T KOG0593|consen 81 EYCDHTVLHELERYPNG--VPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGV-VKLCDFGFARTLSAPGDN 157 (396)
T ss_pred eecchHHHHHHHhccCC--CCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCc-EEeccchhhHhhcCCcch
Confidence 99999999999886554 899999999999999999999999999999999999999977 999999999988777788
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
++..+.|.||.|||.+.+...++.+.||||+||++.+|++|++.|.+..+.+++..+....+...+....=..+.+-|..
T Consensus 158 YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~G 237 (396)
T KOG0593|consen 158 YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHG 237 (396)
T ss_pred hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceee
Confidence 88899999999999998888899999999999999999999999999999999999998777665532222222221111
Q ss_pred -cCCCCc-hhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 253 -TFPEWS-NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 253 -~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
.+|+-- ..-++..++.++.-+.+|+++||..||++|++.+++|.||||.+
T Consensus 238 v~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 238 VRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred eecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence 122111 22255667889999999999999999999999999999999943
No 5
>KOG0581|consensus
Probab=100.00 E-value=1.8e-55 Score=363.13 Aligned_cols=261 Identities=26% Similarity=0.437 Sum_probs=224.4
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc-
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENY- 86 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 86 (313)
......++.+.++.||+|..|+||++.|+.+++.+|+|++... .+.....++.+|+++++..+||+||.+++.|.+++
T Consensus 73 ~~~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~-~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~ 151 (364)
T KOG0581|consen 73 DNGISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN-IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE 151 (364)
T ss_pred ccccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc-CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc
Confidence 3456677899999999999999999999999999999999443 44455688999999999999999999999999998
Q ss_pred EEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCCEEEecCCCeEEEecCCCcc
Q psy6391 87 RLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHK-RRVLHRDLKPQNLLIDAKSNIVKVADFGLAR 164 (313)
Q Consensus 87 ~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~-~~i~H~di~~~Nil~~~~~~~~~l~df~~~~ 164 (313)
.+.|+||||+| +|.+++... +++++..+..++.+++.||.|||+ .+|+||||||+|||++..|. +||||||.+.
T Consensus 152 ~isI~mEYMDgGSLd~~~k~~---g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGe-VKicDFGVS~ 227 (364)
T KOG0581|consen 152 EISICMEYMDGGSLDDILKRV---GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGE-VKICDFGVSG 227 (364)
T ss_pred eEEeehhhcCCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCC-EEeccccccH
Confidence 59999999985 888877754 559999999999999999999995 89999999999999999988 9999999998
Q ss_pred ccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHHhcCCCCCC
Q psy6391 165 AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGD-----SEIDQLFRIFRVLTTPTED 239 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~ 239 (313)
..-.. .....+||-.|||||.+.+. .++.++||||||++++|+++|+.||... ...+....+.....+..+.
T Consensus 228 ~lvnS--~a~tfvGT~~YMsPERi~g~-~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~ 304 (364)
T KOG0581|consen 228 ILVNS--IANTFVGTSAYMSPERISGE-SYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPE 304 (364)
T ss_pred Hhhhh--hcccccccccccChhhhcCC-cCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCc
Confidence 87654 44677999999999999875 4999999999999999999999999875 4445555554322221111
Q ss_pred CCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 240 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
..+|+++.+||..||++||.+||++.|+++|||+++.
T Consensus 305 ---------------------------~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~ 341 (364)
T KOG0581|consen 305 ---------------------------GEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKF 341 (364)
T ss_pred ---------------------------ccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhc
Confidence 1378999999999999999999999999999999974
No 6
>KOG0663|consensus
Probab=100.00 E-value=1.3e-54 Score=352.37 Aligned_cols=289 Identities=48% Similarity=0.884 Sum_probs=270.8
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC--cEE
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN--YRL 88 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~ 88 (313)
..+++|+.+..|++|.||.||+|+++.+++.||+|.++.........-..++|+.+|.+.+|||||.+-++.+.. +.+
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence 367899999999999999999999999999999999999888877788889999999999999999999998844 579
Q ss_pred EEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCC
Q psy6391 89 YLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGV 168 (313)
Q Consensus 89 ~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~ 168 (313)
|+||||+..+|.+++.... +++...+++.+..|++.|+.|||...|+|+|||++|+|++..|. +||+|||+|..++.
T Consensus 153 y~VMe~~EhDLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~-lKiaDFGLAR~ygs 229 (419)
T KOG0663|consen 153 YIVMEYVEHDLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGI-LKIADFGLAREYGS 229 (419)
T ss_pred eeeHHHHHhhHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCc-EEecccchhhhhcC
Confidence 9999999999999999865 56999999999999999999999999999999999999998877 99999999999999
Q ss_pred CCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy6391 169 PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 248 (313)
Q Consensus 169 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
+...++..+-|.||.|||.+.+.+.++.+.|+||+||++.+++++++.|.+....+++.++++..+.|.+..|++...++
T Consensus 230 p~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp 309 (419)
T KOG0663|consen 230 PLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELP 309 (419)
T ss_pred CcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccc
Confidence 98888889999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred Cc-cccCCCCchhhhhhhccCC--CHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 249 DY-KTTFPEWSNFCLDKHVKNL--DQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 249 ~~-~~~~~~~~~~~~~~~~~~~--~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
.. ...+++.....+.+.+..+ ++...+|+..+|..||.+|.||.|.|.|+||.+
T Consensus 310 ~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e 366 (419)
T KOG0663|consen 310 AVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRE 366 (419)
T ss_pred hhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccccccc
Confidence 76 4778888888888877655 499999999999999999999999999999999
No 7
>KOG0600|consensus
Probab=100.00 E-value=2.3e-54 Score=368.07 Aligned_cols=289 Identities=46% Similarity=0.822 Sum_probs=261.8
Q ss_pred hhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC--cE
Q psy6391 10 KSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN--YR 87 (313)
Q Consensus 10 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~ 87 (313)
....+.|+.+++||+|.||.||++++..+|+.||+|.++.+...........+|+.+|++++||||+++.++..+. +.
T Consensus 113 ~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~s 192 (560)
T KOG0600|consen 113 PRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGS 192 (560)
T ss_pred ccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCce
Confidence 4456789999999999999999999999999999999999988888888889999999999999999999998876 78
Q ss_pred EEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 88 LYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 88 ~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
+|+|+|||+.+|.-++.. +.-.+++.+++.++.||+.||+|+|.+|++|+|||.+|||+|.+|. +||+|||+|.+..
T Consensus 193 iYlVFeYMdhDL~GLl~~--p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~-LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 193 IYLVFEYMDHDLSGLLSS--PGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGV-LKIADFGLARFYT 269 (560)
T ss_pred EEEEEecccchhhhhhcC--CCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCC-EEeccccceeecc
Confidence 999999999988888775 4456999999999999999999999999999999999999999988 9999999999775
Q ss_pred CCC-cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 168 VPV-RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 168 ~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
... ..++..+-|.||.|||++.+...|+.+.|+||.||+|.||+.|++.|.+.+..+++..+++.-+.|.+..|+ ..+
T Consensus 270 ~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~-~~k 348 (560)
T KOG0600|consen 270 PSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP-VSK 348 (560)
T ss_pred CCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc-ccc
Confidence 443 346677889999999999998899999999999999999999999999999999999999999999999999 777
Q ss_pred CCCccccCCCCc-hhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 247 LPDYKTTFPEWS-NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 247 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
++.+...-+... +.++...+..+++...+|+..||..||.+|.||.++|.|+||+.
T Consensus 349 LP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t 405 (560)
T KOG0600|consen 349 LPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTT 405 (560)
T ss_pred CCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccccc
Confidence 776555555544 55566668889999999999999999999999999999999944
No 8
>KOG0661|consensus
Probab=100.00 E-value=2.4e-55 Score=371.59 Aligned_cols=293 Identities=40% Similarity=0.705 Sum_probs=262.7
Q ss_pred hhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcC-CCCceeeceeEEeCc-
Q psy6391 9 VKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELN-HPNIVQLHDTMIENY- 86 (313)
Q Consensus 9 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~- 86 (313)
.-..+++|.++++||.|.||.||+|+.+.++..||||.++.....- ...--++|+..|++++ ||||+++.+++.+.+
T Consensus 5 ~~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~-ee~~nLREvksL~kln~hpniikL~Evi~d~~~ 83 (538)
T KOG0661|consen 5 QVIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSW-EECMNLREVKSLRKLNPHPNIIKLKEVIRDNDR 83 (538)
T ss_pred ehhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccH-HHHHHHHHHHHHHhcCCCCcchhhHHHhhccCc
Confidence 3467899999999999999999999999999999999987543221 0122357999999998 999999999999888
Q ss_pred EEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 87 RLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 87 ~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
.+++|||||+++|+.++... +..+++..++.|+.||++||+|+|.+|+.|+|+||+|||+..... +||+|||+|+.+
T Consensus 84 ~L~fVfE~Md~NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~-iKiaDFGLARev 160 (538)
T KOG0661|consen 84 ILYFVFEFMDCNLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDV-IKIADFGLAREV 160 (538)
T ss_pred eEeeeHHhhhhhHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccce-eEeccccccccc
Confidence 99999999999999999885 667999999999999999999999999999999999999986645 999999999887
Q ss_pred CCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 167 GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
.+ ...++..+.|.||.|||++.....++.+.|+||+||+++|+.+-++.|.+.++.+++.++....+.|....|++...
T Consensus 161 ~S-kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~ 239 (538)
T KOG0661|consen 161 RS-KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYN 239 (538)
T ss_pred cc-CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHH
Confidence 53 35567778899999999998888899999999999999999999999999999999999999999999999998655
Q ss_pred C-CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCC
Q psy6391 247 L-PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL 306 (313)
Q Consensus 247 ~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~ 306 (313)
+ ......+|......+...++..+.++.++|.+|+.+||.+||||.++|+||||+.....
T Consensus 240 La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~~ 300 (538)
T KOG0661|consen 240 LASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRAS 300 (538)
T ss_pred HHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccccc
Confidence 4 34777899999999999999999999999999999999999999999999999986443
No 9
>KOG0594|consensus
Probab=100.00 E-value=1.9e-53 Score=350.66 Aligned_cols=294 Identities=61% Similarity=1.038 Sum_probs=273.4
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCC-ceeeceeEEeCc-----
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPN-IVQLHDTMIENY----- 86 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~----- 86 (313)
+..|+.+++||+|.+|+||+|+.+.+|+.||+|.++.....+.......+|+.+++.++|+| |+.+++++....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 77899999999999999999999999999999999988776667788899999999999999 999999998877
Q ss_pred -EEEEEEeccccCHHHHHhhCCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcc
Q psy6391 87 -RLYLIFEFMSMDLKKYIDTVPKG-QFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLAR 164 (313)
Q Consensus 87 -~~~lv~e~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~ 164 (313)
..++|+||++-+|...+...... +.++...++.+++||+.||+|||++||+|+||||+|||+++.|. +||+|||+|.
T Consensus 90 ~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~-lKlaDFGlAr 168 (323)
T KOG0594|consen 90 GKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGV-LKLADFGLAR 168 (323)
T ss_pred ceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCc-EeeeccchHH
Confidence 89999999999999999886643 45788999999999999999999999999999999999999887 8999999999
Q ss_pred ccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCC
Q psy6391 165 AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 244 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
....+...+...+.|.+|.|||++.+...++...||||+||++++|++++..|.+..+.++..++++..+.|....|+..
T Consensus 169 a~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v 248 (323)
T KOG0594|consen 169 AFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGV 248 (323)
T ss_pred HhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCc
Confidence 88888888899999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCCc-hhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCC
Q psy6391 245 SKLPDYKTTFPEWS-NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP 307 (313)
Q Consensus 245 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~ 307 (313)
..++++...++.+. ...+....+..+++..+++.+||+.+|.+|.|+..+|+||||.+.....
T Consensus 249 ~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~ 312 (323)
T KOG0594|consen 249 SSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKS 312 (323)
T ss_pred cccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccch
Confidence 99999999999888 7777777788889999999999999999999999999999999975443
No 10
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=7.5e-51 Score=347.76 Aligned_cols=285 Identities=50% Similarity=0.959 Sum_probs=240.2
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
.+++|++.+.||.|++|.||++.+..++..||+|+++..... .....+.+|+.+++.++||||+++++++..++..++|
T Consensus 3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC-CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 468899999999999999999999999999999998755322 2245678999999999999999999999999999999
Q ss_pred EeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 92 FEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 92 ~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
|||++++|.+.+... ...+++..+..++.||+.||.|||++|++|+||||+|||++.++. ++|+|||++........
T Consensus 82 ~e~~~~~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~-~kl~DfG~~~~~~~~~~ 158 (288)
T cd07871 82 FEYLDSDLKQYLDNC--GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGE-LKLADFGLARAKSVPTK 158 (288)
T ss_pred EeCCCcCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCC-EEECcCcceeeccCCCc
Confidence 999999988887653 335789999999999999999999999999999999999998877 99999999876544433
Q ss_pred ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcc
Q psy6391 172 IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK 251 (313)
Q Consensus 172 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (313)
......++..|+|||.+.+...++.++|+||+|+++|+|++|+.||......+....+......+....|++.....++.
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07871 159 TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFR 238 (288)
T ss_pred cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhh
Confidence 33455778999999998765668999999999999999999999999988888888888888888888887766554433
Q ss_pred cc-CCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 252 TT-FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 252 ~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
.. ++.+.........+.++.++.+||++||+.||.+|||+.|+|+||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 239 SYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred ccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 22 22222222233346789999999999999999999999999999998
No 11
>KOG0598|consensus
Probab=100.00 E-value=8.5e-52 Score=341.30 Aligned_cols=260 Identities=28% Similarity=0.455 Sum_probs=227.7
Q ss_pred hhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCC-CCchhHHHHHHHHhhcCCCCceeeceeEEeCcEE
Q psy6391 10 KSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDE-GIPATAIREISVLKELNHPNIVQLHDTMIENYRL 88 (313)
Q Consensus 10 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 88 (313)
....++|++++.||+|+||+||+++.+.+++.||+|++++..--. ...+...+|..++..++||.|++++..|++.+.+
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kL 100 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKL 100 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeE
Confidence 466899999999999999999999999999999999998876332 2347788999999999999999999999999999
Q ss_pred EEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 89 YLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 89 ~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
|+|++|++| .|...+++ .+.+++..++-.+..|+.||.|||++||+|||+||+|||++..|. ++|+|||+++..-
T Consensus 101 ylVld~~~GGeLf~hL~~---eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GH-i~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 101 YLVLDYLNGGELFYHLQR---EGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGH-IKLTDFGLCKEDL 176 (357)
T ss_pred EEEEeccCCccHHHHHHh---cCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCc-EEEeccccchhcc
Confidence 999999987 66666664 556999999999999999999999999999999999999999998 9999999998654
Q ss_pred CCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCC
Q psy6391 168 VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 247 (313)
Q Consensus 168 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
.........+||..|||||++...+ ++.++|.||||+++|+|++|..||...+.....+.+........+
T Consensus 177 ~~~~~t~tfcGT~eYmAPEil~~~g-y~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p--------- 246 (357)
T KOG0598|consen 177 KDGDATRTFCGTPEYMAPEILLGKG-YDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPP--------- 246 (357)
T ss_pred cCCCccccccCCccccChHHHhcCC-CCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCC---------
Confidence 4434445579999999999998765 899999999999999999999999999988888888764311111
Q ss_pred CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCC----CHHHHhcCCCCCC
Q psy6391 248 PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI----NAENALKHKYFAD 302 (313)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp----s~~e~l~h~~~~~ 302 (313)
.-++.++.++++++|+.||++|. ++.++-+||||.+
T Consensus 247 -------------------~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~ 286 (357)
T KOG0598|consen 247 -------------------GYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKG 286 (357)
T ss_pred -------------------ccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCccccc
Confidence 12789999999999999999996 7999999999998
No 12
>KOG0592|consensus
Probab=100.00 E-value=2e-51 Score=352.88 Aligned_cols=260 Identities=28% Similarity=0.445 Sum_probs=228.9
Q ss_pred hhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccC-CCCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcE
Q psy6391 10 KSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEN-DDEGIPATAIREISVLKEL-NHPNIVQLHDTMIENYR 87 (313)
Q Consensus 10 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~ 87 (313)
.....||...+.||+|+|++|++|+.+.+++.||||++.+.. ..+.....+..|-..|.+| +||.|++++..|.|+..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 556789999999999999999999999999999999997654 3344456777899999999 89999999999999999
Q ss_pred EEEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 88 LYLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 88 ~~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
+|+|+||+. |.|.+++.+. +.+.+.-++-.+.+|+.||+|||++||+|+||||+|||++.++. ++|+|||.+...
T Consensus 149 LYFvLe~A~nGdll~~i~K~---Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmh-ikITDFGsAK~l 224 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKY---GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGH-IKITDFGSAKIL 224 (604)
T ss_pred eEEEEEecCCCcHHHHHHHh---CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCc-EEEeeccccccC
Confidence 999999997 5888888875 45999999999999999999999999999999999999999988 999999999876
Q ss_pred CCCCc-------------ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc
Q psy6391 167 GVPVR-------------IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVL 233 (313)
Q Consensus 167 ~~~~~-------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~ 233 (313)
..... .....+||..|.+||++.. ...+.++|||+|||++|+|+.|.+||.+.++.-.+++++...
T Consensus 225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~-~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~ 303 (604)
T KOG0592|consen 225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLND-SPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALD 303 (604)
T ss_pred ChhhccccCccCcccccCcccceeeeecccCHHHhcC-CCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhc
Confidence 33211 1134689999999998865 458999999999999999999999999999999999998854
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 234 TTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
-..+ .++++.+.+||+++|..||++|+|+.+|.+||||.+.
T Consensus 304 y~fp-----------------------------~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~V 344 (604)
T KOG0592|consen 304 YEFP-----------------------------EGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGV 344 (604)
T ss_pred ccCC-----------------------------CCCCHHHHHHHHHHHccCccccccHHHHhhCcccccC
Confidence 3322 2578999999999999999999999999999999983
No 13
>KOG0583|consensus
Probab=100.00 E-value=1.4e-50 Score=351.97 Aligned_cols=260 Identities=32% Similarity=0.513 Sum_probs=227.4
Q ss_pred hhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC---CCCchhHHHHHHHHhhcC-CCCceeeceeEEeC
Q psy6391 10 KSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD---EGIPATAIREISVLKELN-HPNIVQLHDTMIEN 85 (313)
Q Consensus 10 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~---~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~ 85 (313)
....+.|.+.+.||+|+||+|+.+.+..++..||+|++...... ......+.+|+.+++.++ ||||+++++++...
T Consensus 13 ~~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~ 92 (370)
T KOG0583|consen 13 QLSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP 92 (370)
T ss_pred ccccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC
Confidence 35678999999999999999999999999999999987765221 244567789999999998 99999999999999
Q ss_pred cEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecC-CCeEEEecCCCc
Q psy6391 86 YRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAK-SNIVKVADFGLA 163 (313)
Q Consensus 86 ~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~-~~~~~l~df~~~ 163 (313)
..+++||||+.| +|.+.+.. .+++.+..++.+++||++|++|+|++||+|+||||+|||++.+ ++ +||+|||++
T Consensus 93 ~~~~ivmEy~~gGdL~~~i~~---~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~-~Kl~DFG~s 168 (370)
T KOG0583|consen 93 TKIYIVMEYCSGGDLFDYIVN---KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGN-LKLSDFGLS 168 (370)
T ss_pred CeEEEEEEecCCccHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCC-EEEeccccc
Confidence 999999999986 77777765 4569999999999999999999999999999999999999999 77 999999999
Q ss_pred cccCCCCcccccccccccccchhhhcCCC-CCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCC
Q psy6391 164 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQ-RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 242 (313)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
.............+|++.|+|||++.+.. +.+.++||||+|++||.|++|..||...+....+..+.+...
T Consensus 169 ~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~-------- 240 (370)
T KOG0583|consen 169 AISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEF-------- 240 (370)
T ss_pred cccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCc--------
Confidence 98743445667789999999999998877 668999999999999999999999999888777777654321
Q ss_pred CCCCCCCccccCCCCchhhhhhhccCC-CHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 243 GVSKLPDYKTTFPEWSNFCLDKHVKNL-DQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
.+|. .+ |+++.+|+.+||..||.+|+++.++++||||+.
T Consensus 241 ----------~~p~-----------~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 241 ----------KIPS-----------YLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred ----------cCCC-----------CcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 1222 25 899999999999999999999999999999998
No 14
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.1e-49 Score=338.34 Aligned_cols=285 Identities=74% Similarity=1.240 Sum_probs=246.9
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEec
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
+|++.+.||.|++|.||+|.+..++..|++|.++...........+.+|+.+++.++|||++++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 58999999999999999999998999999999976654444456788999999999999999999999999999999999
Q ss_pred cccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccc
Q psy6391 95 MSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYT 174 (313)
Q Consensus 95 ~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~ 174 (313)
++++|.+.+........+++..++.++.||+.||.|||+.|++|+||+|+||+++.++. ++|+|||.+...+.......
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~-~~l~dfg~~~~~~~~~~~~~ 159 (285)
T cd07861 81 LSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGV-IKLADFGLARAFGIPVRVYT 159 (285)
T ss_pred CCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCc-EEECcccceeecCCCccccc
Confidence 99998888876655567999999999999999999999999999999999999998877 99999999876655444444
Q ss_pred cccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccC
Q psy6391 175 HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTF 254 (313)
Q Consensus 175 ~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (313)
...++..|+|||.+.+...++.++|+||||+++|+|++|..||..................+....|+....+..+....
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (285)
T cd07861 160 HEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTF 239 (285)
T ss_pred CCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhc
Confidence 45668889999988765557899999999999999999999999888877777777777777777777666666666666
Q ss_pred CCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 255 PEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
+.+...........+++++.++|.+||+.||++|||+.++++||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 240 PKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred cccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 6666666666667799999999999999999999999999999998
No 15
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.6e-49 Score=339.15 Aligned_cols=287 Identities=48% Similarity=0.802 Sum_probs=229.0
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
.++|++.+.||+|++|.||+|.+..+++.||+|++....... ....+.+|+.+++.++||||+++++++.++...++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG-TPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF 82 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccc-cchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence 478999999999999999999999899999999987654322 2356788999999999999999999999999999999
Q ss_pred eccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 93 EFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 93 e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
||++++|.+.+... .+.+++..++.++.||+.||.|||+.|++|+||||+||+++.++. ++|+|||++.........
T Consensus 83 e~~~~~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~-~kl~Dfg~~~~~~~~~~~ 159 (303)
T cd07869 83 EYVHTDLCQYMDKH--PGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGE-LKLADFGLARAKSVPSHT 159 (303)
T ss_pred ECCCcCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC-EEECCCCcceeccCCCcc
Confidence 99999988887653 345889999999999999999999999999999999999998877 999999998765443333
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCCCCCCCCCCCCCCcc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE-IDQLFRIFRVLTTPTEDNWPGVSKLPDYK 251 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (313)
.....++..|+|||.+.+...++.++|+||+|+++|+|++|..||....+ ......+......+....|+.....+.+.
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (303)
T cd07869 160 YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFK 239 (303)
T ss_pred CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccc
Confidence 34456789999999987656678999999999999999999999987544 45555665555566555555544333221
Q ss_pred cc-CCCCchhhhhhhc--cCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 252 TT-FPEWSNFCLDKHV--KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 252 ~~-~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
.. +.......+.... ...++++.+|+.+||+.||.+|||+.|+++||||++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~ 294 (303)
T cd07869 240 PERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL 294 (303)
T ss_pred cccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence 11 1111111111111 2356889999999999999999999999999999984
No 16
>KOG0578|consensus
Probab=100.00 E-value=1.3e-50 Score=350.11 Aligned_cols=264 Identities=27% Similarity=0.475 Sum_probs=232.4
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEE
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYL 90 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 90 (313)
+-...|....+||+|+.|.||.+....+++.||+|++....... .+-+.+|+.+++..+|+|||.+++.|...+.+|+
T Consensus 270 dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~--keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWV 347 (550)
T KOG0578|consen 270 DPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK--KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWV 347 (550)
T ss_pred ChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc--hhhhHHHHHHHHhccchHHHHHHHHhcccceeEE
Confidence 44567888999999999999999999999999999998765433 4788999999999999999999999999999999
Q ss_pred EEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 91 IFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 91 v~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
||||++| +|.+..... .+++.+++.+++.++.||.|||.+||+|+|||.+|||+..+|. +||+|||++......
T Consensus 348 VMEym~ggsLTDvVt~~----~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~-vKltDFGFcaqi~~~ 422 (550)
T KOG0578|consen 348 VMEYMEGGSLTDVVTKT----RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGS-VKLTDFGFCAQISEE 422 (550)
T ss_pred EEeecCCCchhhhhhcc----cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCc-EEEeeeeeeeccccc
Confidence 9999986 666666543 3899999999999999999999999999999999999999988 999999999988766
Q ss_pred CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy6391 170 VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 249 (313)
Q Consensus 170 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (313)
......-+||+.|||||++.. +.++.+.||||||++++||+.|++||-..++...++.+.....+....
T Consensus 423 ~~KR~TmVGTPYWMAPEVvtr-k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~---------- 491 (550)
T KOG0578|consen 423 QSKRSTMVGTPYWMAPEVVTR-KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKN---------- 491 (550)
T ss_pred cCccccccCCCCccchhhhhh-cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCC----------
Confidence 666777899999999999865 449999999999999999999999999999988888887644332211
Q ss_pred ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCCC
Q psy6391 250 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 308 (313)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~~ 308 (313)
...+|+++.+|+.+||+.|+.+||++.|+|+||||+.+..+.+
T Consensus 492 ----------------~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~p~ss 534 (550)
T KOG0578|consen 492 ----------------PEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAKPESS 534 (550)
T ss_pred ----------------ccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcCCHHH
Confidence 1358999999999999999999999999999999987655544
No 17
>KOG0660|consensus
Probab=100.00 E-value=9.1e-51 Score=334.03 Aligned_cols=285 Identities=40% Similarity=0.666 Sum_probs=247.8
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEe-----CcEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIE-----NYRL 88 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 88 (313)
..|..++.||.|++|.|..+.++.+|+.||+|.+..........++..+|+.+++.++|+||+.+.+++.. -..+
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv 101 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV 101 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence 34455799999999999999999999999999997555555556888999999999999999999999875 3468
Q ss_pred EEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCC
Q psy6391 89 YLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGV 168 (313)
Q Consensus 89 ~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~ 168 (313)
|+|+|+|+.+|...+.. ++.+++..+.-+++||+.||.|+|+.+++|+|+||+|++++.+.. +||+|||+|.....
T Consensus 102 YiV~elMetDL~~iik~---~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~-lKI~DFGLAR~~~~ 177 (359)
T KOG0660|consen 102 YLVFELMETDLHQIIKS---QQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCD-LKICDFGLARYLDK 177 (359)
T ss_pred EEehhHHhhHHHHHHHc---CccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCC-EEeccccceeeccc
Confidence 99999999988888875 344999999999999999999999999999999999999999987 89999999987753
Q ss_pred --CCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 169 --PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 169 --~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
....++..+-|.+|.|||.+.....++.+.||||.||++.+|++|+..|.+.+...++..+....+.|.++......+
T Consensus 178 ~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s 257 (359)
T KOG0660|consen 178 FFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRS 257 (359)
T ss_pred cCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhcc
Confidence 233445667799999999998888899999999999999999999999999999999999999999887765554442
Q ss_pred C--CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 247 L--PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 247 ~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
- ..+-...+...+.-....+++.++.+.+|+.+||..||.+|+|++|+|+||||++
T Consensus 258 ~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~ 315 (359)
T KOG0660|consen 258 EKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAP 315 (359)
T ss_pred HHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhh
Confidence 1 1244456666677777888999999999999999999999999999999999987
No 18
>KOG0582|consensus
Probab=100.00 E-value=2.7e-49 Score=332.50 Aligned_cols=281 Identities=27% Similarity=0.415 Sum_probs=234.8
Q ss_pred CCCchhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEE
Q psy6391 4 KATDDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMI 83 (313)
Q Consensus 4 ~~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 83 (313)
.+...+....++|++...||.|..++||+|+...++..||||++..++.+.+ .+.+.+|+..++.++||||++++..|.
T Consensus 16 ~~~~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFv 94 (516)
T KOG0582|consen 16 SSEKEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFV 94 (516)
T ss_pred cccccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEE
Confidence 4455677888999999999999999999999999999999999999887766 588999999999999999999999999
Q ss_pred eCcEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCC
Q psy6391 84 ENYRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGL 162 (313)
Q Consensus 84 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~ 162 (313)
.+..+|+||++|.+ ++.+++...-+.+ +++..++.++++++.||.|||++|.+|||||+.|||++.+|. ++|+|||.
T Consensus 95 v~~~LWvVmpfMa~GS~ldIik~~~~~G-l~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~-VkLadFgv 172 (516)
T KOG0582|consen 95 VDSELWVVMPFMAGGSLLDIIKTYYPDG-LEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGT-VKLADFGV 172 (516)
T ss_pred ecceeEEeehhhcCCcHHHHHHHHcccc-ccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCc-EEEcCcee
Confidence 99999999999984 8888887755544 999999999999999999999999999999999999999998 99999998
Q ss_pred ccccCC---CCccc-ccccccccccchhhhc-CCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCC
Q psy6391 163 ARAFGV---PVRIY-THEVVTLWYRAPEVLL-GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPT 237 (313)
Q Consensus 163 ~~~~~~---~~~~~-~~~~~~~~~~~PE~~~-~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~ 237 (313)
+...-. ..... ...+|++.|||||++. .-..|+.++||||+|++..||.+|+.||....+...+..-.+ +.|+
T Consensus 173 sa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLq--n~pp 250 (516)
T KOG0582|consen 173 SASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQ--NDPP 250 (516)
T ss_pred eeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhc--CCCC
Confidence 765522 11122 4568999999999953 334589999999999999999999999998877666555443 2332
Q ss_pred CCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCC
Q psy6391 238 EDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL 306 (313)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~ 306 (313)
....... +. +....++.++.++|..||+.||++|||++++|+|+||+.....
T Consensus 251 ~~~t~~~--------------~~---d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~ 302 (516)
T KOG0582|consen 251 TLLTSGL--------------DK---DEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSK 302 (516)
T ss_pred CcccccC--------------Ch---HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccch
Confidence 1111110 00 1113477899999999999999999999999999999996543
No 19
>KOG0616|consensus
Probab=100.00 E-value=3.4e-50 Score=321.81 Aligned_cols=255 Identities=28% Similarity=0.463 Sum_probs=227.1
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccC-CCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEE
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEN-DDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLY 89 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 89 (313)
..+++|+.++.||.|+||.|-+++.+.+|..||+|++.++. ......+...+|-.+|+.+.||.++++.+.+.+.++++
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence 67899999999999999999999999999999999998765 23333567788999999999999999999999999999
Q ss_pred EEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCC
Q psy6391 90 LIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGV 168 (313)
Q Consensus 90 lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~ 168 (313)
+||||++| .|.+++++ .+++++..++-.+.||+.|++|||+.+|+++|+||+|||+|.+|. +||+|||+++....
T Consensus 121 mvmeyv~GGElFS~Lrk---~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~-iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRK---SGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGH-IKITDFGFAKRVSG 196 (355)
T ss_pred EEEeccCCccHHHHHHh---cCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCc-EEEEeccceEEecC
Confidence 99999986 66677665 456999999999999999999999999999999999999999988 99999999998765
Q ss_pred CCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy6391 169 PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 248 (313)
Q Consensus 169 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
. ....+||+.|+|||.+...+ +..++|-||||+++|+|+.|..||...++..+++++....-.
T Consensus 197 r---T~TlCGTPeYLAPEii~sk~-ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~------------- 259 (355)
T KOG0616|consen 197 R---TWTLCGTPEYLAPEIIQSKG-YNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVK------------- 259 (355)
T ss_pred c---EEEecCCccccChHHhhcCC-CCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCccc-------------
Confidence 4 25679999999999987654 899999999999999999999999999999999988874221
Q ss_pred CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCC-----CCHHHHhcCCCCCC
Q psy6391 249 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATR-----INAENALKHKYFAD 302 (313)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R-----ps~~e~l~h~~~~~ 302 (313)
+| +-+++++.+||.++|+.|-++| ....++..||||++
T Consensus 260 -----fP-----------~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~ 302 (355)
T KOG0616|consen 260 -----FP-----------SYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKG 302 (355)
T ss_pred -----CC-----------cccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccc
Confidence 22 2488999999999999999999 47789999999997
No 20
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1e-48 Score=337.99 Aligned_cols=288 Identities=51% Similarity=0.940 Sum_probs=237.9
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
.+++|.+.+.||+|++|.||+++++.+++.+++|.++..... .....+.+|+.+++.++|+||+++++++..++..++|
T Consensus 4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC-CcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence 467899999999999999999999989999999998765432 2235677899999999999999999999999999999
Q ss_pred EeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 92 FEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 92 ~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
|||++++|.+.+... ...++...++.++.||+.||.|||++|++|+||+|+||+++.++. ++|+|||.+........
T Consensus 83 ~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~-~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 83 FEYLDKDLKQYMDDC--GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGE-LKLADFGLARAKSVPTK 159 (309)
T ss_pred EeCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC-EEECccccceecCCCcc
Confidence 999999988877653 345789999999999999999999999999999999999998877 99999999876544433
Q ss_pred ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcc
Q psy6391 172 IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK 251 (313)
Q Consensus 172 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (313)
......++..|+|||.+.+...++.++|+||+|+++|+|++|+.||...+..+....+......+....|+.......+.
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07872 160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFK 239 (309)
T ss_pred ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhh
Confidence 33445678899999998765668999999999999999999999999988888888888877777776666544322211
Q ss_pred -ccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 252 -TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 252 -~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
..++...........+.+++++.++|.+||+.||.+|||+.|+++||||+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~ 292 (309)
T cd07872 240 NYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL 292 (309)
T ss_pred hhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhc
Confidence 1222222222223345689999999999999999999999999999999974
No 21
>KOG0595|consensus
Probab=100.00 E-value=3.8e-49 Score=328.71 Aligned_cols=264 Identities=33% Similarity=0.527 Sum_probs=226.7
Q ss_pred hhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEE
Q psy6391 9 VKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRL 88 (313)
Q Consensus 9 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 88 (313)
....+.+|.+.+.||+|+|++||+|+++.++..||||.+.+........+.+..|+.+|+.++|||||.+++++++++.+
T Consensus 5 ~~~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i 84 (429)
T KOG0595|consen 5 SMRVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFI 84 (429)
T ss_pred cccccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeE
Confidence 34678999999999999999999999999999999999988765555567788999999999999999999999999999
Q ss_pred EEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecC-C----CeEEEecCCC
Q psy6391 89 YLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAK-S----NIVKVADFGL 162 (313)
Q Consensus 89 ~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~-~----~~~~l~df~~ 162 (313)
++|||||+ |+|..+++.. +.+++..++.++.||+.||++||+++|+|+||||+|||++.. + -.+||+|||+
T Consensus 85 ~lVMEyC~gGDLs~yi~~~---~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 85 YLVMEYCNGGDLSDYIRRR---GRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EEEEEeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 99999998 5888888864 359999999999999999999999999999999999999775 2 2489999999
Q ss_pred ccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCC
Q psy6391 163 ARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 242 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
+..... .......+|++.|||||++... .|+.++|+||+|+++|+|++|+.||+..+..+.+..+.......+..
T Consensus 162 AR~L~~-~~~a~tlcGSplYMAPEV~~~~-~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~--- 236 (429)
T KOG0595|consen 162 ARFLQP-GSMAETLCGSPLYMAPEVIMSQ-QYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVL--- 236 (429)
T ss_pred hhhCCc-hhHHHHhhCCccccCHHHHHhc-cccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCch---
Confidence 998864 3455667899999999998754 59999999999999999999999999999988887655432211110
Q ss_pred CCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 243 GVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
+ ..+++.+.+++...+..+|..|-+..+-+.|+++..+
T Consensus 237 ------------~-----------~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~ 274 (429)
T KOG0595|consen 237 ------------P-----------AELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAAN 274 (429)
T ss_pred ------------h-----------hhccCchhhhhhHHHhcCccccCchHHhhhhhhcccC
Confidence 0 1366777899999999999999999999999998874
No 22
>KOG0658|consensus
Probab=100.00 E-value=1.2e-49 Score=328.02 Aligned_cols=287 Identities=37% Similarity=0.630 Sum_probs=244.4
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC--c---
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN--Y--- 86 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~--- 86 (313)
..-.|+-.+.+|.|+||.||+|....+++.+|||..-.+.... .+|+++++.++||||+++..+|... +
T Consensus 22 ~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~ 95 (364)
T KOG0658|consen 22 VEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK------NRELQIMRKLDHPNIVRLLYFFSSSTESDEV 95 (364)
T ss_pred eEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC------cHHHHHHHhcCCcCeeeEEEEEEecCCCchh
Confidence 3446888999999999999999999999999999886654322 3799999999999999999988743 2
Q ss_pred EEEEEEeccccCHHHHHhhC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 87 RLYLIFEFMSMDLKKYIDTV-PKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 87 ~~~lv~e~~~~~l~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
...+||||++.+|...++.. ..+..++.-.++-..+||+.||+|||+.||+|+||||+|+|+|.+.+.+||||||.|+.
T Consensus 96 ~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 96 YLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 45689999999999988853 23456888899999999999999999999999999999999999988899999999998
Q ss_pred cCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCC
Q psy6391 166 FGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 245 (313)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
...+... .....|..|.|||.+.+...++.+.||||.||++.||+-|++.|.+.+..+++..+.+..+.|..+....+.
T Consensus 176 L~~~epn-iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn 254 (364)
T KOG0658|consen 176 LVKGEPN-ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMN 254 (364)
T ss_pred eccCCCc-eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcC
Confidence 8654433 445668889999999999999999999999999999999999999999999999999999999887666554
Q ss_pred CCCCccccCCCCchhhhhh-hccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCC
Q psy6391 246 KLPDYKTTFPEWSNFCLDK-HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL 306 (313)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~ 306 (313)
.... ...+++..+..+.+ ....+++++.+|+.++|..+|++|.++.|++.||||.+-.+.
T Consensus 255 ~~y~-~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 255 PNYT-EFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred cccc-cccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 4322 34455555555554 346799999999999999999999999999999999986554
No 23
>KOG0591|consensus
Probab=100.00 E-value=3.6e-51 Score=325.34 Aligned_cols=253 Identities=33% Similarity=0.561 Sum_probs=222.9
Q ss_pred hhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeece-eEEeCcE-
Q psy6391 10 KSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHD-TMIENYR- 87 (313)
Q Consensus 10 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~-~~~~~~~- 87 (313)
...+.+|+|+++||+|+||.||+++...+|..+|.|.+.....+....+....|+.+|++++||||+++++ .+..+..
T Consensus 15 ~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~ev 94 (375)
T KOG0591|consen 15 QKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEV 94 (375)
T ss_pred cccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchh
Confidence 44678899999999999999999999999999999999988777777788999999999999999999998 5555544
Q ss_pred EEEEEeccc-cCHHHHHhhCCC-CCCCCHHHHHHHHHHHHHHHHHHHh--CC--ceeccCCCCCEEEecCCCeEEEecCC
Q psy6391 88 LYLIFEFMS-MDLKKYIDTVPK-GQFLAADKVKSITYQIFQAILFCHK--RR--VLHRDLKPQNLLIDAKSNIVKVADFG 161 (313)
Q Consensus 88 ~~lv~e~~~-~~l~~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~Lh~--~~--i~H~di~~~Nil~~~~~~~~~l~df~ 161 (313)
++||||+++ |+|..+++..++ .+.+++..+|.++.|++.||..+|+ .. +.|+||||.||+++.+|. +||+|||
T Consensus 95 lnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gv-vKLGDfG 173 (375)
T KOG0591|consen 95 LNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGV-VKLGDFG 173 (375)
T ss_pred hHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCc-eeeccch
Confidence 899999998 588888877543 5568999999999999999999999 44 899999999999999987 9999999
Q ss_pred CccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCC
Q psy6391 162 LARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNW 241 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
++.............+||+.|||||.+...+ ++.+|||||+||++|+|+.-+.||.+.+-.+...++.+...+|.+.
T Consensus 174 L~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~-Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~-- 250 (375)
T KOG0591|consen 174 LGRFLSSKTTFAHSLVGTPYYMSPERIHESG-YNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPD-- 250 (375)
T ss_pred hHhHhcchhHHHHhhcCCCcccCHHHHhcCC-CCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcH--
Confidence 9999988777778889999999999998765 9999999999999999999999999998888877777654333221
Q ss_pred CCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCH
Q psy6391 242 PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINA 291 (313)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~ 291 (313)
...|.++..+|..|+.+||+.||+.
T Consensus 251 -------------------------~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 251 -------------------------EHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred -------------------------HHhhhHHHHHHHHHccCCcccCCCc
Confidence 1478999999999999999999984
No 24
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=7.1e-48 Score=331.51 Aligned_cols=289 Identities=49% Similarity=0.918 Sum_probs=240.6
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
.+++|++.+.||.|++|.||++.+..+++.|++|.+....... ....+.+|+.+++.++|+||+++++++..++..++|
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEG-APCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccC-chhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEE
Confidence 4789999999999999999999999899999999987554322 235677899999999999999999999999999999
Q ss_pred EeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 92 FEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 92 ~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
+||++++|.+.+... ...+++..++.++.||+.||.+||+.|++|+||+|+||+++.++. ++|+|||.+........
T Consensus 83 ~e~~~~~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~-~kl~dfg~~~~~~~~~~ 159 (301)
T cd07873 83 FEYLDKDLKQYLDDC--GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGE-LKLADFGLARAKSIPTK 159 (301)
T ss_pred EeccccCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCc-EEECcCcchhccCCCCC
Confidence 999999988887653 335889999999999999999999999999999999999998876 99999999876544333
Q ss_pred ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcc
Q psy6391 172 IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK 251 (313)
Q Consensus 172 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (313)
......++..|+|||.+.+...++.++|+||||+++|+|++|+.||...+.......+......+....|+.......+.
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (301)
T cd07873 160 TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 239 (301)
T ss_pred cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccc
Confidence 33344668889999998765567899999999999999999999999888888888877777777777666544333322
Q ss_pred -ccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCC
Q psy6391 252 -TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 304 (313)
Q Consensus 252 -~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~ 304 (313)
...+.+...+.......+++++.+||.+||+.||.+|||+.|+++||||+.-.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 240 SYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred ccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 22344444444444567899999999999999999999999999999998754
No 25
>KOG0588|consensus
Probab=100.00 E-value=2.4e-49 Score=347.01 Aligned_cols=265 Identities=34% Similarity=0.529 Sum_probs=237.6
Q ss_pred hhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEeccc-CCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEE
Q psy6391 10 KSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRME-NDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRL 88 (313)
Q Consensus 10 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 88 (313)
...++=|++.+.||.|+.|.|-.|++..||+..|||++.+. .........+.+|+-+++.+.|||++.++++++...++
T Consensus 8 ~~tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~l 87 (786)
T KOG0588|consen 8 KNTIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHL 87 (786)
T ss_pred cccccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceE
Confidence 34677899999999999999999999999999999999877 45556678899999999999999999999999999999
Q ss_pred EEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 89 YLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 89 ~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
|+|.||++| .|.+++-. .+++++.+++.+++||+.|+.|+|..+|+|+|+||+|+|++..++ +||+|||+|...-
T Consensus 88 ylvlEyv~gGELFdylv~---kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~n-IKIADFGMAsLe~ 163 (786)
T KOG0588|consen 88 YLVLEYVPGGELFDYLVR---KGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNN-IKIADFGMASLEV 163 (786)
T ss_pred EEEEEecCCchhHHHHHh---hCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccC-Eeeeccceeeccc
Confidence 999999985 77777664 456999999999999999999999999999999999999999998 9999999997654
Q ss_pred CCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCC
Q psy6391 168 VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 247 (313)
Q Consensus 168 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
+.......+|++-|++||.+.+.++.+.++||||.|++||.|++|+.||+..+-...+.++.++....+
T Consensus 164 -~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MP---------- 232 (786)
T KOG0588|consen 164 -PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMP---------- 232 (786)
T ss_pred -CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCC----------
Confidence 456677789999999999999999889999999999999999999999998887777777766544333
Q ss_pred CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCCC
Q psy6391 248 PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 308 (313)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~~ 308 (313)
..+|+++++||.+||..||.+|.|.+||+.|||+++-.++|.
T Consensus 233 -------------------s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~~ 274 (786)
T KOG0588|consen 233 -------------------SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLPS 274 (786)
T ss_pred -------------------CcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCCh
Confidence 258999999999999999999999999999999999766654
No 26
>KOG0585|consensus
Probab=100.00 E-value=4.1e-49 Score=333.67 Aligned_cols=270 Identities=27% Similarity=0.464 Sum_probs=226.6
Q ss_pred chhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCC--------CC----chhHHHHHHHHhhcCCCC
Q psy6391 7 DDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDE--------GI----PATAIREISVLKELNHPN 74 (313)
Q Consensus 7 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--------~~----~~~~~~e~~~l~~l~~~~ 74 (313)
++-+..+++|++++.||+|.+|.|-+|++..+++.||+|++.+..... .. .++..+|+.++++++|||
T Consensus 90 ~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~n 169 (576)
T KOG0585|consen 90 DQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPN 169 (576)
T ss_pred cccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcC
Confidence 344567899999999999999999999999999999999997653211 11 147889999999999999
Q ss_pred ceeeceeEEeC--cEEEEEEeccccCHHHHHhhCCCCCC-CCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecC
Q psy6391 75 IVQLHDTMIEN--YRLYLIFEFMSMDLKKYIDTVPKGQF-LAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAK 151 (313)
Q Consensus 75 i~~~~~~~~~~--~~~~lv~e~~~~~l~~~~~~~~~~~~-l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~ 151 (313)
||+++++..+. +.+|+|+||+..+ .+ ...+..++ +++.+++.++++++.||.|||.+||+|+||||+|+|++.+
T Consensus 170 VV~LiEvLDDP~s~~~YlVley~s~G--~v-~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~ 246 (576)
T KOG0585|consen 170 VVKLIEVLDDPESDKLYLVLEYCSKG--EV-KWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSD 246 (576)
T ss_pred eeEEEEeecCcccCceEEEEEeccCC--cc-ccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCC
Confidence 99999999865 5899999999854 22 22334555 9999999999999999999999999999999999999999
Q ss_pred CCeEEEecCCCcccc-----CCCCcccccccccccccchhhhcC---CCCCCcchhHhHHHHHHHHHHhCCCCCCCCChH
Q psy6391 152 SNIVKVADFGLARAF-----GVPVRIYTHEVVTLWYRAPEVLLG---SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 223 (313)
Q Consensus 152 ~~~~~l~df~~~~~~-----~~~~~~~~~~~~~~~~~~PE~~~~---~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~ 223 (313)
|. +||+|||.+... ..........+||+.|+|||.+.+ ....+.+.||||+|++||+|+.|+.||..+...
T Consensus 247 g~-VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~ 325 (576)
T KOG0585|consen 247 GT-VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL 325 (576)
T ss_pred Cc-EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH
Confidence 77 999999999865 233344455789999999999876 234688999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 224 DQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
+.+.++.+.....+.. +.+..++.++|++||.+||++|.++.++..|||....
T Consensus 326 ~l~~KIvn~pL~fP~~---------------------------pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 326 ELFDKIVNDPLEFPEN---------------------------PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred HHHHHHhcCcccCCCc---------------------------ccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 9999988743322211 2477999999999999999999999999999999987
Q ss_pred CCCC
Q psy6391 304 TDLP 307 (313)
Q Consensus 304 ~~~~ 307 (313)
.+-|
T Consensus 379 g~~~ 382 (576)
T KOG0585|consen 379 GDSP 382 (576)
T ss_pred CCCC
Confidence 5444
No 27
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.1e-47 Score=329.27 Aligned_cols=294 Identities=60% Similarity=1.076 Sum_probs=250.3
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
+++|++.+.||.|++|.||+|.++.+++.|++|.+............+.+|+.++++++|+|++++++++.++...++||
T Consensus 1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 47899999999999999999999989999999998766544444567889999999999999999999999999999999
Q ss_pred eccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 93 EFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 93 e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
||+++++.+.+.... ...+++..++.++.||+.||.+||++|++|+||+|+||+++..+..++|+|||.+...+.....
T Consensus 81 e~~~~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~ 159 (294)
T PLN00009 81 EYLDLDLKKHMDSSP-DFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT 159 (294)
T ss_pred ecccccHHHHHHhCC-CCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccc
Confidence 999988888776432 3346888999999999999999999999999999999999876666999999999766544333
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
.....++..|+|||.+.+...++.++|+||+|+++|+|++|..||......+...++......+....|.+...++....
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (294)
T PLN00009 160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKS 239 (294)
T ss_pred cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhh
Confidence 34456688899999987655678999999999999999999999998888888888888777888888887777777666
Q ss_pred cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCC
Q psy6391 253 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP 307 (313)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~ 307 (313)
..+.+.........+.+++++.+++.+||+.+|++||++.++++||||.+..+.|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~~~~ 294 (294)
T PLN00009 240 AFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGDAP 294 (294)
T ss_pred hcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHhcCC
Confidence 6665555555555678899999999999999999999999999999999865543
No 28
>KOG0033|consensus
Probab=100.00 E-value=5.6e-51 Score=318.48 Aligned_cols=264 Identities=30% Similarity=0.499 Sum_probs=228.2
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
.-++|++.+.||+|+|+.|+++.+..+|+.+++|++..........+++.+|+.+-+.++||||+++++.+...+..++|
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 45789999999999999999999999999999999987776666678999999999999999999999999999999999
Q ss_pred EeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecC--CCeEEEecCCCccccCCC
Q psy6391 92 FEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAK--SNIVKVADFGLARAFGVP 169 (313)
Q Consensus 92 ~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~--~~~~~l~df~~~~~~~~~ 169 (313)
+|++.|+ ++...+-.....++..+-...+||+++|+|+|.+||||+|+||.|+++-.. +.-+||+|||++...+ .
T Consensus 89 Fe~m~G~--dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~-~ 165 (355)
T KOG0033|consen 89 FDLVTGG--ELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN-D 165 (355)
T ss_pred Eecccch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC-C
Confidence 9999984 232222122346788888899999999999999999999999999999433 2339999999999887 4
Q ss_pred CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy6391 170 VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 249 (313)
Q Consensus 170 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (313)
.......+|++.|+|||++...+ ++..+|||+.|++||-|+.|.+||...+....++++..+.-..+.+.|
T Consensus 166 g~~~~G~~GtP~fmaPEvvrkdp-y~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w-------- 236 (355)
T KOG0033|consen 166 GEAWHGFAGTPGYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEW-------- 236 (355)
T ss_pred ccccccccCCCcccCHHHhhcCC-CCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCccc--------
Confidence 45556678999999999997654 999999999999999999999999999999999999876444444344
Q ss_pred ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCC
Q psy6391 250 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 304 (313)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~ 304 (313)
+.+++++.+|+++||..||.+|.|+.|+|+|||+++-+
T Consensus 237 -----------------~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~ 274 (355)
T KOG0033|consen 237 -----------------DTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRE 274 (355)
T ss_pred -----------------CcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchH
Confidence 46899999999999999999999999999999999843
No 29
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.1e-47 Score=328.69 Aligned_cols=281 Identities=47% Similarity=0.852 Sum_probs=226.1
Q ss_pred ccceeeeeeccccceEEEEEEeCc-CCcEEEEEEecccCCCCCCchhHHHHHHHHhhc---CCCCceeeceeEE-----e
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKV-TGALVAIKKIRMENDDEGIPATAIREISVLKEL---NHPNIVQLHDTMI-----E 84 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l---~~~~i~~~~~~~~-----~ 84 (313)
++|++.+.||+|++|.||+|.+.. ++..+|+|.++...........+.+|+.+++.+ +||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 479999999999999999999854 467899999876654444445667788777766 6999999999885 3
Q ss_pred CcEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcc
Q psy6391 85 NYRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLAR 164 (313)
Q Consensus 85 ~~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~ 164 (313)
....++|||+++++|.+.+.... ...+++..++.++.||+.||.|||+.|++|+||||+||+++.++. ++|+|||.+.
T Consensus 81 ~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~-~kl~Dfg~~~ 158 (290)
T cd07862 81 ETKLTLVFEHVDQDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ-IKLADFGLAR 158 (290)
T ss_pred CCcEEEEEccCCCCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCC-EEEccccceE
Confidence 45689999999999988887543 334899999999999999999999999999999999999998877 9999999997
Q ss_pred ccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCC
Q psy6391 165 AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 244 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
..... .......|+..|+|||.+... .++.++||||+|+++|+|++|..||......+....+......+.+..|+..
T Consensus 159 ~~~~~-~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (290)
T cd07862 159 IYSFQ-MALTSVVVTLWYRAPEVLLQS-SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 236 (290)
T ss_pred eccCC-cccccccccccccChHHHhCC-CCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhh
Confidence 65433 222345678999999998654 4788999999999999999999999999888888888877766666655543
Q ss_pred CCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 245 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
..+... .+........+...+.++..+.+++.+||+.||++|||+.++|+||||
T Consensus 237 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 237 VALPRQ--AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hcccch--hccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 322221 111112222333445789999999999999999999999999999998
No 30
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.1e-47 Score=328.23 Aligned_cols=283 Identities=37% Similarity=0.675 Sum_probs=220.8
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
++|++.+.||+|++|.||+++++.+++.+++|++............+.+|+.+++.++|+||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 47999999999999999999999999999999998765544555778899999999999999999999999999999999
Q ss_pred ccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc-c
Q psy6391 94 FMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR-I 172 (313)
Q Consensus 94 ~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~-~ 172 (313)
|+++++.+.+... ...+++..++.++.||+.||.|||+.|++|+||||+||+++.++. ++|+|||++........ .
T Consensus 81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~-~kl~Dfg~~~~~~~~~~~~ 157 (287)
T cd07848 81 YVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDV-LKLCDFGFARNLSEGSNAN 157 (287)
T ss_pred cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCc-EEEeeccCccccccccccc
Confidence 9998776666542 345899999999999999999999999999999999999998877 99999999977543221 2
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcc-
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK- 251 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 251 (313)
.....|+..|+|||.+.+.. ++.++|+||+|+++|+|++|+.||......+....+.....+.+...+......+.+.
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd07848 158 YTEYVATRWYRSPELLLGAP-YGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHG 236 (287)
T ss_pred ccccccccccCCcHHHcCCC-CCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcc
Confidence 22346788999999987654 7899999999999999999999999877766655555443332221111000000000
Q ss_pred ccCCC--CchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 252 TTFPE--WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 252 ~~~~~--~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
...+. ............+|.++.+||++||+.||++|||++++|+||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 237 LRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred cccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 00000 00000111123578999999999999999999999999999998
No 31
>KOG0605|consensus
Probab=100.00 E-value=1.7e-48 Score=334.82 Aligned_cols=262 Identities=32% Similarity=0.509 Sum_probs=222.7
Q ss_pred hhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEE
Q psy6391 10 KSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKELNHPNIVQLHDTMIENYRL 88 (313)
Q Consensus 10 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 88 (313)
+.-+++|++++.||+|+||.||+|+.+.+|..||+|++++.... ......++.|-.+|...+++.||+++..|.+.+++
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 55789999999999999999999999999999999999887632 23357788899999999999999999999999999
Q ss_pred EEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 89 YLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 89 ~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
|+||||++| ++..++.. ...+++..++..+.+++.|+..||+.|++|+||||+|+|+|..|. +||+|||++....
T Consensus 217 YLiMEylPGGD~mTLL~~---~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GH-iKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMR---KDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGH-IKLSDFGLSTGLD 292 (550)
T ss_pred EEEEEecCCccHHHHHHh---cCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCC-Eeeccccccchhh
Confidence 999999987 66666554 556999999999999999999999999999999999999999998 9999999985331
Q ss_pred C-------------------------C----------------------CcccccccccccccchhhhcCCCCCCcchhH
Q psy6391 168 V-------------------------P----------------------VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 200 (313)
Q Consensus 168 ~-------------------------~----------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di 200 (313)
. + .......+||+.|+|||++.+.+ ++...|.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg-Y~~~cDw 371 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG-YGKECDW 371 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC-CCccccH
Confidence 1 0 00111236799999999998866 9999999
Q ss_pred hHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHH
Q psy6391 201 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKT 280 (313)
Q Consensus 201 ~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 280 (313)
|||||+|||||.|.+||.+.++.+...++.+--.... +|. -..+++++++||.+|
T Consensus 372 WSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~----------------fP~---------~~~~s~eA~DLI~rl 426 (550)
T KOG0605|consen 372 WSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLK----------------FPE---------EVDLSDEAKDLITRL 426 (550)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhcc----------------CCC---------cCcccHHHHHHHHHH
Confidence 9999999999999999999999999988876311100 000 024789999999999
Q ss_pred hccCCCCCC---CHHHHhcCCCCCC
Q psy6391 281 LIYCPATRI---NAENALKHKYFAD 302 (313)
Q Consensus 281 l~~dp~~Rp---s~~e~l~h~~~~~ 302 (313)
+. ||++|. .+.||.+||||++
T Consensus 427 l~-d~~~RLG~~G~~EIK~HPfF~~ 450 (550)
T KOG0605|consen 427 LC-DPENRLGSKGAEEIKKHPFFKG 450 (550)
T ss_pred hc-CHHHhcCcccHHHHhcCCcccc
Confidence 99 999998 5999999999998
No 32
>KOG0198|consensus
Probab=100.00 E-value=1.2e-48 Score=327.52 Aligned_cols=261 Identities=31% Similarity=0.505 Sum_probs=213.9
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc--EEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENY--RLYL 90 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~l 90 (313)
..+|...+.||+|+||.||.+.+..+|..+|+|.+....... .+.+.+|+.+|++++|||||+++|...... .+++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~--~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT--SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh--HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence 567899999999999999999999889999999998763222 467889999999999999999999855443 7999
Q ss_pred EEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEec-CCCeEEEecCCCccccCC
Q psy6391 91 IFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDA-KSNIVKVADFGLARAFGV 168 (313)
Q Consensus 91 v~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~-~~~~~~l~df~~~~~~~~ 168 (313)
+|||+++ +|.+.+..... .+++..++.+.+||+.||.|||++|++|+||||+|||++. ++. +||+|||.+.....
T Consensus 94 ~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~-~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGD-VKLADFGLAKKLES 170 (313)
T ss_pred eeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCe-EEeccCcccccccc
Confidence 9999985 88888887432 6999999999999999999999999999999999999999 455 99999999987652
Q ss_pred ---CCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHhcCCCCCCCCCCC
Q psy6391 169 ---PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGD-SEIDQLFRIFRVLTTPTEDNWPGV 244 (313)
Q Consensus 169 ---~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
.........||+.|||||++........++|||||||++.+|+||+.||... ........+......| .++
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P---~ip-- 245 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLP---EIP-- 245 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCC---CCC--
Confidence 1122334678999999999986333446999999999999999999999973 3333333333221111 111
Q ss_pred CCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCC
Q psy6391 245 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 305 (313)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~ 305 (313)
..+|.++.+||.+|+..||++||||.++|+|||+++...
T Consensus 246 ----------------------~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 246 ----------------------DSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred ----------------------cccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 258999999999999999999999999999999988544
No 33
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1e-47 Score=327.79 Aligned_cols=282 Identities=54% Similarity=0.969 Sum_probs=229.1
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEec
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
+|++.+.||.|++|.||+|.+..+|+.+++|.++...........+.+|+.+++.++|+|++++++++.+.+..++++||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 58999999999999999999999999999999987655555557788999999999999999999999999999999999
Q ss_pred cccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccc
Q psy6391 95 MSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYT 174 (313)
Q Consensus 95 ~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~ 174 (313)
++++|.+.+... ...+++..++.++.||+.||.|||+.|++|+||+|+||+++.++. ++|+|||.+...+.......
T Consensus 81 ~~~~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~-~~l~dfg~~~~~~~~~~~~~ 157 (284)
T cd07839 81 CDQDLKKYFDSC--NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGE-LKLADFGLARAFGIPVRCYS 157 (284)
T ss_pred CCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCc-EEECccchhhccCCCCCCcC
Confidence 999988877652 345899999999999999999999999999999999999998877 99999999876654444334
Q ss_pred cccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCC-CCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcccc
Q psy6391 175 HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLF-QGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT 253 (313)
Q Consensus 175 ~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (313)
...++..|+|||.+.+...++.++|+||||+++|+|++|..|+ ...+.......+.+....+....++.......+. .
T Consensus 158 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 236 (284)
T cd07839 158 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYK-P 236 (284)
T ss_pred CCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccccc-c
Confidence 4567888999999876556789999999999999999998875 5555566666666655555555444443333321 1
Q ss_pred CCCCc-hhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 254 FPEWS-NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 254 ~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
++... ...+....+.+++++.+||.+||+.||.+|||+.++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 237 YPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 11111 111233345789999999999999999999999999999998
No 34
>KOG0597|consensus
Probab=100.00 E-value=2.8e-49 Score=340.93 Aligned_cols=257 Identities=33% Similarity=0.562 Sum_probs=232.3
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
|++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+..........+.+|++++++++||||+..++.|+...+.++|.
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 57899999999999999999999999999999999988777666678899999999999999999999999999999999
Q ss_pred eccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 93 EFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 93 e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
||+.|+|..++.. ++.++++.++.++.+++.||.|||+.+|.|+|+||.|||+..++. +|++|||++...+.+...
T Consensus 81 e~a~g~L~~il~~---d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~-~KlcdFg~Ar~m~~~t~v 156 (808)
T KOG0597|consen 81 EYAVGDLFTILEQ---DGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGT-LKLCDFGLARAMSTNTSV 156 (808)
T ss_pred hhhhhhHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCc-eeechhhhhhhcccCcee
Confidence 9999988888774 556999999999999999999999999999999999999999987 999999999998888777
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
....-||+.|||||+..+ .+++..+|+|||||++|++++|++||-...-......+..-...++
T Consensus 157 ltsikGtPlYmAPElv~e-~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p--------------- 220 (808)
T KOG0597|consen 157 LTSIKGTPLYMAPELVEE-QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPP--------------- 220 (808)
T ss_pred eeeccCcccccCHHHHcC-CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCc---------------
Confidence 777789999999999986 4599999999999999999999999998777666666654222111
Q ss_pred cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 253 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
.+++..+..|+..+|.+||.+|.+..+++.|||.++.
T Consensus 221 --------------~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 221 --------------STASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred --------------ccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence 2588999999999999999999999999999999884
No 35
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.2e-47 Score=327.31 Aligned_cols=284 Identities=62% Similarity=1.085 Sum_probs=243.0
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEec
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
+|++++.||.|++|.||+|.+..+++.|++|.+............+.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 48999999999999999999998999999999876655554556788999999999999999999999999999999999
Q ss_pred cccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccc
Q psy6391 95 MSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYT 174 (313)
Q Consensus 95 ~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~ 174 (313)
+.++|.+.+.... ...+++..++.++.|++.||+|||+.|++|+||+|+||+++.++. ++|+|||.+...+.......
T Consensus 81 ~~~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~-~~l~dfg~~~~~~~~~~~~~ 158 (284)
T cd07860 81 LHQDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA-IKLADFGLARAFGVPVRTYT 158 (284)
T ss_pred cccCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC-EEEeeccchhhcccCccccc
Confidence 9988888776543 345899999999999999999999999999999999999998877 99999999876654433334
Q ss_pred cccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccC
Q psy6391 175 HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTF 254 (313)
Q Consensus 175 ~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (313)
...++..|+|||.+.+....+.++|+||||+++|++++|+.||...+......+.......+....++....+++....+
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07860 159 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSF 238 (284)
T ss_pred cccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhc
Confidence 44567889999988765557889999999999999999999999888888888888877777666666555555555666
Q ss_pred CCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 255 PEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
+.+.........+.++.++.++|.+||+.||.+|||+.++++||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 239 PKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred ccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 6666555555566789999999999999999999999999999998
No 36
>KOG0662|consensus
Probab=100.00 E-value=7.8e-48 Score=288.03 Aligned_cols=289 Identities=54% Similarity=0.938 Sum_probs=265.4
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
+..|.-+++||+|.+|+||+++++.+++.||+|.++.+..++..+...++|+-+++.+.|+||+++++....+..+.+|+
T Consensus 1 m~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 1 MQKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred CcchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence 35678889999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred eccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 93 EFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 93 e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
|++.-+|..++.... +.+..+.++.++.|++.+|.++|++++.|+|+||+|.+++.+|. +|++|||++...+.+.+.
T Consensus 81 e~cdqdlkkyfdsln--g~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~nge-lkladfglarafgipvrc 157 (292)
T KOG0662|consen 81 EFCDQDLKKYFDSLN--GDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGE-LKLADFGLARAFGIPVRC 157 (292)
T ss_pred HHhhHHHHHHHHhcC--CcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCc-EEecccchhhhcCCceEe
Confidence 999999999988753 45889999999999999999999999999999999999999988 999999999999999999
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK 251 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (313)
++..+-|.+|.+|.++.+.+-++.+.|+||.||++.++.. |.+.|.+++-.++..+++...+.|..+.|+.+.+++++.
T Consensus 158 ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk 237 (292)
T KOG0662|consen 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYK 237 (292)
T ss_pred eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCc
Confidence 9889999999999999998889999999999999999987 778899999999999999999999999999999999865
Q ss_pred ccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCC
Q psy6391 252 TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 304 (313)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~ 304 (313)
..-.--.-..+.+.++.++....+++.++|.-+|.+|.+++++++||||++..
T Consensus 238 ~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s 290 (292)
T KOG0662|consen 238 PYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFS 290 (292)
T ss_pred ccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccccC
Confidence 43222223346667788999999999999999999999999999999999854
No 37
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.5e-47 Score=334.70 Aligned_cols=287 Identities=37% Similarity=0.602 Sum_probs=220.4
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC-----cEEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN-----YRLY 89 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 89 (313)
+|++.+.||+|++|.||+|.+..++..||+|.+............+.+|+.+++.++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 58999999999999999999999999999999875433333345688999999999999999999988643 3589
Q ss_pred EEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 90 LIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 90 lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
+||||++++|.+.+.. ...+++..++.++.||+.||.|||++|++|+||||+|||++.++. ++|+|||++......
T Consensus 81 lv~e~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~-~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 81 VVFELMESDLHQVIKA---NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFND 156 (338)
T ss_pred EEEecCCCCHHHHHHh---cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCc-EEEccCccccccccc
Confidence 9999999998888764 335899999999999999999999999999999999999998877 999999998754221
Q ss_pred C---cccccccccccccchhhhcCC-CCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCC
Q psy6391 170 V---RIYTHEVVTLWYRAPEVLLGS-QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 245 (313)
Q Consensus 170 ~---~~~~~~~~~~~~~~PE~~~~~-~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
. .......|+..|+|||++.+. ..++.++||||||+++|+|++|+.||...+.......+....+.+.........
T Consensus 157 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 236 (338)
T cd07859 157 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVR 236 (338)
T ss_pred cCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 1 112334688999999988642 357899999999999999999999998877666655555544443332211111
Q ss_pred CCC--CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCC
Q psy6391 246 KLP--DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 305 (313)
Q Consensus 246 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~ 305 (313)
... .+................+.+++++.++|.+||+.||++|||++|+++||||++...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 237 NEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred hhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 000 000000011111122334567899999999999999999999999999999987433
No 38
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.5e-46 Score=324.39 Aligned_cols=294 Identities=43% Similarity=0.817 Sum_probs=239.4
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC--cEEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN--YRLY 89 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~ 89 (313)
.+++|++.+.||.|++|.||+|.+..+++.|++|.++...........+.+|+.+++.++|+|++++++++... +..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 57899999999999999999999998999999999976654444445677899999999999999999998755 5789
Q ss_pred EEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 90 LIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 90 lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
+||||++++|.+++.... ..+++..++.++.||+.+|.+||+.|++|+||+|+||+++.++. ++|+|||.+......
T Consensus 85 lv~e~~~~~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~-~kL~dfg~~~~~~~~ 161 (309)
T cd07845 85 LVMEYCEQDLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGC-LKIADFGLARTYGLP 161 (309)
T ss_pred EEEecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC-EEECccceeeecCCc
Confidence 999999999888887632 45899999999999999999999999999999999999998877 999999999876544
Q ss_pred CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy6391 170 VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 249 (313)
Q Consensus 170 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (313)
........++..|+|||.+.+....+.++|+||+|+++|+|++|..||...+.......+......+....|+....++.
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
T cd07845 162 AKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPL 241 (309)
T ss_pred cCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccc
Confidence 33333445577899999987656678999999999999999999999999988888888888777776666655544332
Q ss_pred ccc-cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCCCc
Q psy6391 250 YKT-TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF 309 (313)
Q Consensus 250 ~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~~~ 309 (313)
... ..+.............+++++.++|.+||+.||++|||+.++++||||++ ..+|..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~-~~~~~~ 301 (309)
T cd07845 242 VGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKE-KPLPCE 301 (309)
T ss_pred cccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc-CCCCCC
Confidence 111 11111112223333457899999999999999999999999999999986 444443
No 39
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.1e-47 Score=332.32 Aligned_cols=259 Identities=30% Similarity=0.431 Sum_probs=218.6
Q ss_pred chhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccC-CCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC
Q psy6391 7 DDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEN-DDEGIPATAIREISVLKELNHPNIVQLHDTMIEN 85 (313)
Q Consensus 7 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 85 (313)
......+++|++.+.||+|++|.||+++++.+++.||+|++.... ........+.+|+.+++.++||||+++++++.++
T Consensus 11 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 90 (329)
T PTZ00263 11 DTSSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDE 90 (329)
T ss_pred ccCCCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcC
Confidence 445566899999999999999999999999999999999997643 2222346788999999999999999999999999
Q ss_pred cEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcc
Q psy6391 86 YRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLAR 164 (313)
Q Consensus 86 ~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~ 164 (313)
+..++||||+.+ +|.+.+.. .+.+++..++.++.||+.||.|||++|++|+||||+|||++.++. ++|+|||++.
T Consensus 91 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~-~kl~Dfg~~~ 166 (329)
T PTZ00263 91 NRVYFLLEFVVGGELFTHLRK---AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGH-VKVTDFGFAK 166 (329)
T ss_pred CEEEEEEcCCCCChHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCC-EEEeeccCce
Confidence 999999999975 77777764 345899999999999999999999999999999999999999887 9999999997
Q ss_pred ccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCC
Q psy6391 165 AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 244 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
...... ....|+..|+|||.+.+.. .+.++|+||||+++|+|++|..||...........+.....
T Consensus 167 ~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~---------- 232 (329)
T PTZ00263 167 KVPDRT---FTLCGTPEYLAPEVIQSKG-HGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRL---------- 232 (329)
T ss_pred EcCCCc---ceecCChhhcCHHHHcCCC-CCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCc----------
Confidence 664322 2346889999999987654 78999999999999999999999998777666555543210
Q ss_pred CCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC-----HHHHhcCCCCCC
Q psy6391 245 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN-----AENALKHKYFAD 302 (313)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~e~l~h~~~~~ 302 (313)
.++ ..++..+.+||.+||+.||++||+ +.++++||||++
T Consensus 233 --------~~p-----------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 233 --------KFP-----------NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred --------CCC-----------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence 011 136789999999999999999996 799999999987
No 40
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.5e-46 Score=321.16 Aligned_cols=280 Identities=44% Similarity=0.821 Sum_probs=225.1
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc---CCCCceeeceeEEe-----Cc
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL---NHPNIVQLHDTMIE-----NY 86 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l---~~~~i~~~~~~~~~-----~~ 86 (313)
+|++.+.||+|++|.||++.++.+++.|++|.++.............+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 58999999999999999999999999999999976554444445667788777765 79999999998864 34
Q ss_pred EEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 87 RLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 87 ~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
..++++|++.++|.+++.... ...+++..++.++.||+.||.|||+.|++|+||||+||+++.++. ++|+|||++...
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~-~kl~dfg~~~~~ 158 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKVP-PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQ-VKLADFGLARIY 158 (288)
T ss_pred eEEEEEcccccCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC-EEECccCccccc
Confidence 689999999999888887643 234899999999999999999999999999999999999998877 999999998765
Q ss_pred CCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 167 GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
.... ......++..|+|||.+.+. .++.++||||+|+++|+|++|..||..........++......+....|+....
T Consensus 159 ~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07863 159 SCQM-ALTPVVVTLWYRAPEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVT 236 (288)
T ss_pred cCcc-cCCCccccccccCchHhhCC-CCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccc
Confidence 4322 22334678899999998764 489999999999999999999999998888888888777666665555543222
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
... ..+............+.++.++.++|.+||+.||++|||+.+++.||||
T Consensus 237 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 237 LPR--GAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred ccc--cccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 111 1122222223334445789999999999999999999999999999998
No 41
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=6.9e-47 Score=340.23 Aligned_cols=284 Identities=36% Similarity=0.588 Sum_probs=222.9
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC-------
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN------- 85 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 85 (313)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+|+.+++.++|+||+++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 457999999999999999999999899999999885432 3345799999999999999999887432
Q ss_pred -cEEEEEEeccccCHHHHHhhC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCc
Q psy6391 86 -YRLYLIFEFMSMDLKKYIDTV-PKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLA 163 (313)
Q Consensus 86 -~~~~lv~e~~~~~l~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~ 163 (313)
..+++||||+++++.+.+... .....+++..++.++.||+.||.|||+.|++|+||||+|||++.++..++|+|||++
T Consensus 139 ~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla 218 (440)
T PTZ00036 139 NIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSA 218 (440)
T ss_pred ceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccc
Confidence 257799999999988776543 234568999999999999999999999999999999999999877656999999999
Q ss_pred cccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCC
Q psy6391 164 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
........ .....++..|+|||++.+...++.++|||||||++|+|++|..||......+...++....+.+....+..
T Consensus 219 ~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~ 297 (440)
T PTZ00036 219 KNLLAGQR-SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKE 297 (440)
T ss_pred hhccCCCC-cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 76543222 23346789999999987666689999999999999999999999999888888888777665554332221
Q ss_pred CCCCCCccccCCCCchhhhhhhc-cCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCC
Q psy6391 244 VSKLPDYKTTFPEWSNFCLDKHV-KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 304 (313)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~ 304 (313)
+...- ....++......+...+ ...++++.+||.+||+.||.+|||+.|+|+||||.+..
T Consensus 298 ~~~~~-~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~ 358 (440)
T PTZ00036 298 MNPNY-ADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR 358 (440)
T ss_pred hchhh-hcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence 11000 00112222222222222 25789999999999999999999999999999998743
No 42
>KOG0580|consensus
Probab=100.00 E-value=1.7e-48 Score=303.34 Aligned_cols=264 Identities=28% Similarity=0.472 Sum_probs=231.2
Q ss_pred CchhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccC-CCCCCchhHHHHHHHHhhcCCCCceeeceeEEe
Q psy6391 6 TDDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEN-DDEGIPATAIREISVLKELNHPNIVQLHDTMIE 84 (313)
Q Consensus 6 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 84 (313)
...-...+++|++.+.||+|.||.||+|+.+.++-.||+|++.+.+ .......++.+|+++-..++||||++++++|.+
T Consensus 14 ~~~~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd 93 (281)
T KOG0580|consen 14 RATKTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD 93 (281)
T ss_pred ccccccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheec
Confidence 3445678999999999999999999999999999999999997665 334455788899999999999999999999999
Q ss_pred CcEEEEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCc
Q psy6391 85 NYRLYLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLA 163 (313)
Q Consensus 85 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~ 163 (313)
...+|+++||.. |.+...++.. ....+++...+....|++.|+.|+|.++++|+||||+|+|+...+. +|++|||.+
T Consensus 94 ~~riyLilEya~~gel~k~L~~~-~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~-lkiAdfGws 171 (281)
T KOG0580|consen 94 SKRIYLILEYAPRGELYKDLQEG-RMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGE-LKIADFGWS 171 (281)
T ss_pred cceeEEEEEecCCchHHHHHHhc-ccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCC-eeccCCCce
Confidence 999999999997 5777777743 3456899999999999999999999999999999999999999988 999999999
Q ss_pred cccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCC
Q psy6391 164 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
.....+ .....+||..|.+||...+.. .+...|+|++|++.|+++.|..||......+.++++.+.-..
T Consensus 172 V~~p~~--kR~tlcgt~dyl~pEmv~~~~-hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~-------- 240 (281)
T KOG0580|consen 172 VHAPSN--KRKTLCGTLDYLPPEMVEGRG-HDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLK-------- 240 (281)
T ss_pred eecCCC--CceeeecccccCCHhhcCCCC-ccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHcccc--------
Confidence 776533 335679999999999987755 799999999999999999999999999888888888763221
Q ss_pred CCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 244 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
+| ..++.++.++|.+|+..+|.+|.+..|++.|||+...
T Consensus 241 ----------~p-----------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 241 ----------FP-----------STISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred ----------CC-----------cccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 11 2589999999999999999999999999999999864
No 43
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.8e-46 Score=320.13 Aligned_cols=284 Identities=54% Similarity=0.991 Sum_probs=242.8
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEec
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
+|++.+.||.|++|.||+|.+..++..|++|+++..... .....+.+|+.+++.++|+|++++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence 589999999999999999999989999999999765432 2236677899999999999999999999999999999999
Q ss_pred cccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccc
Q psy6391 95 MSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYT 174 (313)
Q Consensus 95 ~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~ 174 (313)
++++|.+.+........+++..+..++.||+.+|.+||+.|++|+||+|+||+++.++. ++|+|||.+...........
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~-~~l~d~g~~~~~~~~~~~~~ 158 (284)
T cd07836 80 MDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGE-LKLADFGLARAFGIPVNTFS 158 (284)
T ss_pred CCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCc-EEEeecchhhhhcCCccccc
Confidence 99998888876544456899999999999999999999999999999999999998877 99999999976544433334
Q ss_pred cccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccC
Q psy6391 175 HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTF 254 (313)
Q Consensus 175 ~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (313)
...++..|+|||.+.+...++.++|+||+|+++|++++|+.||......+...++......+....+......+.+...+
T Consensus 159 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07836 159 NEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTF 238 (284)
T ss_pred cccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccc
Confidence 45668889999998765567899999999999999999999999888888888888877777777777666666666666
Q ss_pred CCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 255 PEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
+...........+.+++.+.+++.+|++.||.+||++.++++||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 239 PRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred cCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 6555555545556789999999999999999999999999999998
No 44
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=4.1e-47 Score=325.11 Aligned_cols=252 Identities=27% Similarity=0.448 Sum_probs=213.6
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
++|++.+.||+|++|.||++.+..+++.||+|++..... .......+.+|+.+++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 479999999999999999999999999999999875432 1222456788999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
||+.+ +|.+.+.. .+.+++..+..++.||+.||.|||++|++|+||||+||+++.++. ++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~-~kl~Dfg~~~~~~~~~- 155 (291)
T cd05612 81 EYVPGGELFSYLRN---SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGH-IKLTDFGFAKKLRDRT- 155 (291)
T ss_pred eCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCC-EEEEecCcchhccCCc-
Confidence 99975 78777764 345899999999999999999999999999999999999998877 9999999987654322
Q ss_pred ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcc
Q psy6391 172 IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK 251 (313)
Q Consensus 172 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (313)
....|+..|+|||.+.+.. .+.++||||||+++|+|++|..||...........+......
T Consensus 156 --~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~---------------- 216 (291)
T cd05612 156 --WTLCGTPEYLAPEVIQSKG-HNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLE---------------- 216 (291)
T ss_pred --ccccCChhhcCHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcC----------------
Confidence 2346889999999987644 789999999999999999999999988776666665442110
Q ss_pred ccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC-----HHHHhcCCCCCC
Q psy6391 252 TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN-----AENALKHKYFAD 302 (313)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~e~l~h~~~~~ 302 (313)
++ ..++..+.+||++||+.||.+||+ +.++++||||+.
T Consensus 217 --~~-----------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 259 (291)
T cd05612 217 --FP-----------RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKS 259 (291)
T ss_pred --CC-----------ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccC
Confidence 00 236789999999999999999995 999999999975
No 45
>KOG0667|consensus
Probab=100.00 E-value=2e-47 Score=336.16 Aligned_cols=281 Identities=36% Similarity=0.542 Sum_probs=231.7
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcC------CCCceeeceeEEeCcEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELN------HPNIVQLHDTMIENYRL 88 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 88 (313)
+|+|++.||+|.||.|-+|++..+++.||||+++....- ..+...|+.+|..++ .-|+|+++++|...+++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f---~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl 263 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF---LRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL 263 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHH---HHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence 799999999999999999999999999999999865433 466778999999996 34899999999999999
Q ss_pred EEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCC-CeEEEecCCCccccC
Q psy6391 89 YLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKS-NIVKVADFGLARAFG 167 (313)
Q Consensus 89 ~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~-~~~~l~df~~~~~~~ 167 (313)
+||+|.++-+|++++..-.- ..++...++.++.||+.+|..||+.||+|+||||+|||+...+ ..+||+|||.++..+
T Consensus 264 ciVfELL~~NLYellK~n~f-~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~ 342 (586)
T KOG0667|consen 264 CIVFELLSTNLYELLKNNKF-RGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFES 342 (586)
T ss_pred eeeehhhhhhHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccC
Confidence 99999999999999886433 3489999999999999999999999999999999999985433 459999999999876
Q ss_pred CCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCC
Q psy6391 168 VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 247 (313)
Q Consensus 168 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
.... ....+..|.|||++.+.+ ++.+.|||||||+++||.+|.+.|.+.+..+++.++....+.|+...+....+.
T Consensus 343 q~vy---tYiQSRfYRAPEVILGlp-Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~ 418 (586)
T KOG0667|consen 343 QRVY---TYIQSRFYRAPEVILGLP-YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKA 418 (586)
T ss_pred Ccce---eeeeccccccchhhccCC-CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhcccc
Confidence 5543 456788999999999865 999999999999999999999999999999999999999998887555443332
Q ss_pred CCcccc-------CCCCc--------------------------hhhhhhhcc-CCCHHHHHHHHHHhccCCCCCCCHHH
Q psy6391 248 PDYKTT-------FPEWS--------------------------NFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAEN 293 (313)
Q Consensus 248 ~~~~~~-------~~~~~--------------------------~~~~~~~~~-~~~~~l~~li~~~l~~dp~~Rps~~e 293 (313)
..+-.. +.... ...+...+. .-...+.+||++||..||.+|+|+.+
T Consensus 419 ~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~q 498 (586)
T KOG0667|consen 419 HKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQ 498 (586)
T ss_pred ceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHH
Confidence 211111 00000 000111122 34567789999999999999999999
Q ss_pred HhcCCCCCCC
Q psy6391 294 ALKHKYFADK 303 (313)
Q Consensus 294 ~l~h~~~~~~ 303 (313)
+|+||||++.
T Consensus 499 al~Hpfl~~~ 508 (586)
T KOG0667|consen 499 ALNHPFLTGT 508 (586)
T ss_pred HhcCcccccc
Confidence 9999999953
No 46
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.3e-46 Score=319.26 Aligned_cols=283 Identities=69% Similarity=1.176 Sum_probs=240.5
Q ss_pred ceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecc
Q psy6391 16 YEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFM 95 (313)
Q Consensus 16 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 95 (313)
|++.+.||.|++|.||+|.+..+|..|++|++............+.+|+.+++.++|++++++++++.+++..++++||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 67889999999999999999989999999999876555545567889999999999999999999999999999999999
Q ss_pred ccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccccc
Q psy6391 96 SMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTH 175 (313)
Q Consensus 96 ~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~ 175 (313)
+++|.+.+..... ..+++..+..++.|++.+|.|||+.+++|+||+|+||+++.++. ++|+|||.+............
T Consensus 81 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~-~~l~df~~~~~~~~~~~~~~~ 158 (283)
T cd07835 81 DLDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGA-LKLADFGLARAFGVPVRTYTH 158 (283)
T ss_pred CcCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCc-EEEeecccccccCCCccccCc
Confidence 8898888776432 35899999999999999999999999999999999999998776 999999998765444333334
Q ss_pred ccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCC
Q psy6391 176 EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFP 255 (313)
Q Consensus 176 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (313)
..++..|+|||.+.+....+.++|+||+|+++|+|++|+.||...+.......+......+....|+....++++...++
T Consensus 159 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07835 159 EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFP 238 (283)
T ss_pred cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcc
Confidence 45678899999886655578899999999999999999999998888877777777777666666666656666666666
Q ss_pred CCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 256 EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 256 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
.+.........+.++.++.++|.+||+.||.+|||+.+++.||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 239 KWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred cccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 555555555567789999999999999999999999999999998
No 47
>KOG0192|consensus
Probab=100.00 E-value=1.2e-46 Score=324.55 Aligned_cols=260 Identities=27% Similarity=0.372 Sum_probs=219.5
Q ss_pred chhhhhhccceeeeeeccccceEEEEEEeCcCCcE-EEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC
Q psy6391 7 DDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGAL-VAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN 85 (313)
Q Consensus 7 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~-~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 85 (313)
....+...+..+.+.+|.|+||+||++.+. |.. +|+|++............+.+|+.++.+++|||||+++|++.++
T Consensus 34 ~~~~i~~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~ 111 (362)
T KOG0192|consen 34 PEEEIDPDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSP 111 (362)
T ss_pred cceecChHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 455666777788888999999999999998 556 99999987665544467899999999999999999999999988
Q ss_pred c-EEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ceeccCCCCCEEEecCCCeEEEecCCC
Q psy6391 86 Y-RLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRR-VLHRDLKPQNLLIDAKSNIVKVADFGL 162 (313)
Q Consensus 86 ~-~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~-i~H~di~~~Nil~~~~~~~~~l~df~~ 162 (313)
. ...+||||+.+ +|..++... ....++...+..++.||+.|++|||+++ |+|+||||+|||++.++.++||+|||+
T Consensus 112 ~~~~~iVtEy~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGl 190 (362)
T KOG0192|consen 112 PGSLCIVTEYMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGL 190 (362)
T ss_pred CCceEEEEEeCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCcc
Confidence 7 89999999985 888888764 3556999999999999999999999999 999999999999999974599999999
Q ss_pred ccccCCCCcccccccccccccchhhhcC-CCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCC
Q psy6391 163 ARAFGVPVRIYTHEVVTLWYRAPEVLLG-SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNW 241 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
+..............||..|||||++.+ ...++.++||||+|+++|+|+||+.||...........+......+..+
T Consensus 191 sr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p-- 268 (362)
T KOG0192|consen 191 SREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIP-- 268 (362)
T ss_pred ceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC--
Confidence 9877654333344689999999999985 3469999999999999999999999999998866666655433333222
Q ss_pred CCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 242 PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
..+++.+..++.+||+.||.+||+..+++.
T Consensus 269 -------------------------~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 269 -------------------------KECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred -------------------------ccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 136799999999999999999999999875
No 48
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=7.3e-46 Score=318.07 Aligned_cols=287 Identities=57% Similarity=1.015 Sum_probs=233.5
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcC-CCCceeeceeEEeCcE-----
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELN-HPNIVQLHDTMIENYR----- 87 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~----- 87 (313)
++|++.+.||.|++|.||+|.+..+++.|++|.+............+.+|+.+++.++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 4799999999999999999999989999999998776554445567889999999994 6999999999987655
Q ss_pred EEEEEeccccCHHHHHhhCCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 88 LYLIFEFMSMDLKKYIDTVPK--GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 88 ~~lv~e~~~~~l~~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
.+++|||++++|.+.+..... ...+++..++.++.||+.||.|||+.|++|+||+|+||+++.+++.++|+|||.+..
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 899999999998888765322 346899999999999999999999999999999999999998445599999999876
Q ss_pred cCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCC
Q psy6391 166 FGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 245 (313)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
............++..|+|||.+.+...++.++|+||+|+++|+|++|..||...........+......+....++...
T Consensus 161 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T cd07837 161 FSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVS 240 (295)
T ss_pred cCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchh
Confidence 54433333444668889999988665567899999999999999999999999888877777777766666655555444
Q ss_pred CCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCC
Q psy6391 246 KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA 301 (313)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~ 301 (313)
.+.... ..+.+.........+.++.++.+||.+||+.||.+||++.|++.||||+
T Consensus 241 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 241 KLRDWH-EFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred hccchh-hcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 333221 2333333333444467899999999999999999999999999999995
No 49
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.5e-46 Score=320.64 Aligned_cols=286 Identities=49% Similarity=0.918 Sum_probs=236.0
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC--cEEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN--YRLY 89 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~ 89 (313)
.+++|++.+.||.|++|.||+|.+..+++.+++|.++...........+.+|+.+++.++||||+++++++... +..+
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 35789999999999999999999998899999999986655544455678899999999999999999999877 8999
Q ss_pred EEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 90 LIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 90 lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
+|+||++++|.+++.... ..+++.+++.++.||+.||.|||+.|++|+||+|+||+++.++. ++|+|||.+......
T Consensus 83 lv~e~~~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~-~~l~d~g~~~~~~~~ 159 (293)
T cd07843 83 MVMEYVEHDLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGI-LKICDFGLAREYGSP 159 (293)
T ss_pred EEehhcCcCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCc-EEEeecCceeeccCC
Confidence 999999999988887633 35899999999999999999999999999999999999998877 999999999877654
Q ss_pred CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy6391 170 VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 249 (313)
Q Consensus 170 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (313)
........++..|+|||.+.+....+.++|+||+|+++|+|++|..||......+...++......+....|+....++.
T Consensus 160 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (293)
T cd07843 160 LKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPG 239 (293)
T ss_pred ccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccch
Confidence 33334456788899999987655578999999999999999999999999888888888877777766666655444332
Q ss_pred cc-ccCCCCchhhhhhhccC--CCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 250 YK-TTFPEWSNFCLDKHVKN--LDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 250 ~~-~~~~~~~~~~~~~~~~~--~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
.. ..........+...++. +++.+.++|++||+.+|++|||+.|+|.||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 240 AKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred hcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 22 11111122222333333 48999999999999999999999999999998
No 50
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.1e-46 Score=327.16 Aligned_cols=249 Identities=27% Similarity=0.409 Sum_probs=207.7
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc-
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM- 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~- 97 (313)
+.||+|++|.||++.+..+++.||+|+++.... .......+.+|+.+++.++||||+++++++..++..++||||+.+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 468999999999999999999999999975432 122235677899999999999999999999999999999999986
Q ss_pred CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccccccc
Q psy6391 98 DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHEV 177 (313)
Q Consensus 98 ~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~~ 177 (313)
+|.+.+.. ...+++.+++.++.||+.||+|||+.|++|+||||+||+++.++. ++|+|||++..............
T Consensus 81 ~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~-~kl~DfG~a~~~~~~~~~~~~~~ 156 (323)
T cd05571 81 ELFFHLSR---ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFC 156 (323)
T ss_pred cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCC-EEEeeCCCCcccccCCCccccee
Confidence 77666654 345899999999999999999999999999999999999998877 99999999875433223334456
Q ss_pred ccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCC
Q psy6391 178 VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW 257 (313)
Q Consensus 178 ~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (313)
|+..|+|||.+.+. .++.++||||+|+++|+|++|..||...+.......+...... ++
T Consensus 157 gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~------------------~p-- 215 (323)
T cd05571 157 GTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR------------------FP-- 215 (323)
T ss_pred cCccccChhhhcCC-CCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCC------------------CC--
Confidence 89999999998764 4799999999999999999999999887766655554331100 01
Q ss_pred chhhhhhhccCCCHHHHHHHHHHhccCCCCCC-----CHHHHhcCCCCCC
Q psy6391 258 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFAD 302 (313)
Q Consensus 258 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~e~l~h~~~~~ 302 (313)
..+++++.+||.+||+.||++|| ++.++++||||++
T Consensus 216 ---------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~ 256 (323)
T cd05571 216 ---------RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFAS 256 (323)
T ss_pred ---------CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 24789999999999999999999 8999999999987
No 51
>KOG0032|consensus
Probab=100.00 E-value=4.5e-46 Score=323.65 Aligned_cols=264 Identities=34% Similarity=0.519 Sum_probs=230.6
Q ss_pred hhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCC-CCchhHHHHHHHHhhcC-CCCceeeceeEEeCcE
Q psy6391 10 KSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDE-GIPATAIREISVLKELN-HPNIVQLHDTMIENYR 87 (313)
Q Consensus 10 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~ 87 (313)
...-..|++.+.||.|.||.||.+..+.+|+.+|+|++.+..... .....+.+|+.+++++. ||||+.+.+.|++...
T Consensus 31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~ 110 (382)
T KOG0032|consen 31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDS 110 (382)
T ss_pred ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCe
Confidence 344567999999999999999999999999999999998776433 23468899999999997 9999999999999999
Q ss_pred EEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCC---eEEEecCCCc
Q psy6391 88 LYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSN---IVKVADFGLA 163 (313)
Q Consensus 88 ~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~---~~~l~df~~~ 163 (313)
+++|||++.| .|.+.+... .+++..+..++.||+.+++|||+.|++|+|+||+|+|+..... .++++|||++
T Consensus 111 ~~lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla 186 (382)
T KOG0032|consen 111 VYLVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLA 186 (382)
T ss_pred EEEEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence 9999999985 777777664 2999999999999999999999999999999999999965532 5999999999
Q ss_pred cccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCC
Q psy6391 164 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
..... .......+||+.|+|||++... .++...||||+|+++|.|++|..||...........+.........+.|
T Consensus 187 ~~~~~-~~~~~~~~Gtp~y~APEvl~~~-~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w-- 262 (382)
T KOG0032|consen 187 KFIKP-GERLHTIVGTPEYVAPEVLGGR-PYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPW-- 262 (382)
T ss_pred eEccC-CceEeeecCCccccCchhhcCC-CCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCc--
Confidence 98876 4555678999999999998754 4899999999999999999999999999988888877765444444444
Q ss_pred CCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCC
Q psy6391 244 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 304 (313)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~ 304 (313)
+.++..+.+||++||..||.+|+|+.++|+|||+++..
T Consensus 263 -----------------------~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~ 300 (382)
T KOG0032|consen 263 -----------------------DDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIG 300 (382)
T ss_pred -----------------------cccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCc
Confidence 45889999999999999999999999999999999853
No 52
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.5e-46 Score=329.02 Aligned_cols=287 Identities=34% Similarity=0.584 Sum_probs=226.8
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC-----
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN----- 85 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 85 (313)
...++|++++.||.|+||.||++.+..+++.||+|.+............+.+|+.+++.++|+||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 456789999999999999999999998999999999876543333345677899999999999999999988643
Q ss_pred -cEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcc
Q psy6391 86 -YRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLAR 164 (313)
Q Consensus 86 -~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~ 164 (313)
...++++++++++|..++.. ..+++..++.++.||+.||.|||+.|++|+||||+||+++.++. ++|+|||++.
T Consensus 92 ~~~~~~~~~~~~~~l~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~-~kl~Dfg~~~ 166 (343)
T cd07878 92 FNEVYLVTNLMGADLNNIVKC----QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCE-LRILDFGLAR 166 (343)
T ss_pred cCcEEEEeecCCCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCC-EEEcCCccce
Confidence 35789999998888777653 34899999999999999999999999999999999999998877 9999999998
Q ss_pred ccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCC
Q psy6391 165 AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 244 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
...... ....++..|+|||.+.+...++.++||||||+++|+|++|+.||...+..+....+......+....+...
T Consensus 167 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd07878 167 QADDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKI 243 (343)
T ss_pred ecCCCc---CCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 654322 34468899999999876556899999999999999999999999988877777777665544433322111
Q ss_pred CCC--CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCC
Q psy6391 245 SKL--PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 305 (313)
Q Consensus 245 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~ 305 (313)
..- ..+....+......+...+.+.++.+.+||.+||+.||.+|||+.|+|+||||.+..+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~ 306 (343)
T cd07878 244 SSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHD 306 (343)
T ss_pred chhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCC
Confidence 100 0011111222222233334567888999999999999999999999999999987543
No 53
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=9.8e-46 Score=315.79 Aligned_cols=284 Identities=43% Similarity=0.810 Sum_probs=234.7
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEec
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
+|++.+.||.|++|.||+|.+..++..+++|++............+.+|+.++++++|+|++++++++.++...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 58999999999999999999988899999999987654445557888999999999999999999999999999999999
Q ss_pred cccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCC-ccc
Q psy6391 95 MSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV-RIY 173 (313)
Q Consensus 95 ~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~-~~~ 173 (313)
++++|.+.+.... ..+++.+++.++.||+.+|.|||+.|++|+||+|+||+++.++. ++|+|||.+....... ...
T Consensus 81 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~-~~l~dfg~~~~~~~~~~~~~ 157 (286)
T cd07832 81 MPSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGV-LKIADFGLARLFSEEEPRLY 157 (286)
T ss_pred cCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCc-EEEeeeeecccccCCCCCcc
Confidence 9779988876533 45899999999999999999999999999999999999998876 9999999987664332 123
Q ss_pred ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc-
Q psy6391 174 THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT- 252 (313)
Q Consensus 174 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 252 (313)
....++..|+|||.+.+....+.++||||+|++++++++|..||..................+....+++...+.....
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07832 158 SHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKI 237 (286)
T ss_pred ccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcc
Confidence 3456788999999987666678999999999999999999999988888888888877777766666655444332211
Q ss_pred cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCC
Q psy6391 253 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA 301 (313)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~ 301 (313)
.++......+....+..+.++.++|.+||+.||++||+++++|+||||.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 238 TFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred cCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 1111111123333456789999999999999999999999999999995
No 54
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3.2e-46 Score=325.63 Aligned_cols=261 Identities=28% Similarity=0.430 Sum_probs=216.7
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
++|++.+.||+|++|.||+|.+..+++.||+|++...... ......+.+|+.+++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 4799999999999999999999989999999999765321 222356788999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
||++| +|.+++.. ...+++..++.++.||+.||.|||+.|++|+||||+||+++.++. ++|+|||++.....
T Consensus 81 e~~~g~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~-~kL~Dfg~a~~~~~--- 153 (333)
T cd05600 81 EYVPGGDFRTLLNN---LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGH-IKLTDFGLSKGIVT--- 153 (333)
T ss_pred eCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCC-EEEEeCcCCccccc---
Confidence 99975 88888764 345899999999999999999999999999999999999998877 99999999876543
Q ss_pred ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcc
Q psy6391 172 IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK 251 (313)
Q Consensus 172 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (313)
......|+..|+|||.+.+. .++.++||||||+++|+|++|..||...+..+....+.........+....
T Consensus 154 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~-------- 224 (333)
T cd05600 154 YANSVVGSPDYMAPEVLRGK-GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDD-------- 224 (333)
T ss_pred ccCCcccCccccChhHhcCC-CCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCc--------
Confidence 22345789999999998765 589999999999999999999999998877666555543211111110000
Q ss_pred ccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 252 TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
....+++++.+||.+||..+|.+||++.++++||||++.
T Consensus 225 -------------~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 225 -------------PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred -------------cccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 002478999999999999999999999999999999973
No 55
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.6e-45 Score=316.47 Aligned_cols=290 Identities=48% Similarity=0.825 Sum_probs=234.8
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC---CCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD---EGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
+|++.+.||.|++|.||+|.+..+++.|++|.+...... ......+.+|+.+++.++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 588999999999999999999888999999999766533 23345667899999999999999999999999999999
Q ss_pred EeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 92 FEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 92 ~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
|||+.++|.+++.... ..+++..++.++.||+.||.|||++|++|+||+|+||+++.++. ++|+|||++........
T Consensus 81 ~e~~~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~-~~l~dfg~~~~~~~~~~ 157 (298)
T cd07841 81 FEFMETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGV-LKLADFGLARSFGSPNR 157 (298)
T ss_pred EcccCCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCC-EEEccceeeeeccCCCc
Confidence 9999778888886532 35899999999999999999999999999999999999998876 99999999987655433
Q ss_pred ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcc
Q psy6391 172 IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK 251 (313)
Q Consensus 172 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (313)
......++..|+|||.+.+...++.++|+||+|+++|++++|..||....+.....++......+....++....+....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (298)
T cd07841 158 KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYV 237 (298)
T ss_pred cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccc
Confidence 33444567889999988665567899999999999999999998898888777777777666666555555444433221
Q ss_pred ccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCCC
Q psy6391 252 TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 308 (313)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~~ 308 (313)
.. ..............++.++.++|.+||+.||++|||+.|++.||||++...++.
T Consensus 238 ~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~~ 293 (298)
T cd07841 238 EF-KPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPTP 293 (298)
T ss_pred cc-cccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCCC
Confidence 11 111111122233567899999999999999999999999999999999655544
No 56
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3e-46 Score=325.87 Aligned_cols=258 Identities=27% Similarity=0.403 Sum_probs=216.3
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcCC-cEEEEEEecccCC-CCCCchhHHHHHHHHhhcCCCCceeeceeEEeC
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTG-ALVAIKKIRMEND-DEGIPATAIREISVLKELNHPNIVQLHDTMIEN 85 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~-~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 85 (313)
.....+++|++.+.||+|++|.||+|.+..++ ..||+|++..... .......+.+|+.+++.++||||+++++++.++
T Consensus 24 ~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~ 103 (340)
T PTZ00426 24 KNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE 103 (340)
T ss_pred CCCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC
Confidence 34557889999999999999999999876554 6899999865432 223345678899999999999999999999999
Q ss_pred cEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcc
Q psy6391 86 YRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLAR 164 (313)
Q Consensus 86 ~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~ 164 (313)
+..++||||+.+ +|.+.+.. .+.+++..++.++.||+.||.|||+.|++|+||||+|||++.++. ++|+|||++.
T Consensus 104 ~~~~lv~Ey~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~-ikL~DFG~a~ 179 (340)
T PTZ00426 104 SYLYLVLEFVIGGEFFTFLRR---NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGF-IKMTDFGFAK 179 (340)
T ss_pred CEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCC-EEEecCCCCe
Confidence 999999999975 78777764 345899999999999999999999999999999999999998877 9999999997
Q ss_pred ccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCC
Q psy6391 165 AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 244 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
...... ....|+..|+|||++.+.. ++.++|+||+|+++|+|++|..||...+.......+......
T Consensus 180 ~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~--------- 246 (340)
T PTZ00426 180 VVDTRT---YTLCGTPEYIAPEILLNVG-HGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIY--------- 246 (340)
T ss_pred ecCCCc---ceecCChhhcCHHHHhCCC-CCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC---------
Confidence 654322 3456899999999987644 789999999999999999999999988777666665442111
Q ss_pred CCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCC-----CHHHHhcCCCCCC
Q psy6391 245 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFAD 302 (313)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~e~l~h~~~~~ 302 (313)
++ ..+++.+.++|++||+.||++|+ ++.++++||||++
T Consensus 247 ---------~p-----------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~ 289 (340)
T PTZ00426 247 ---------FP-----------KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGN 289 (340)
T ss_pred ---------CC-----------CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 01 23678999999999999999995 9999999999986
No 57
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=5.8e-46 Score=317.12 Aligned_cols=260 Identities=23% Similarity=0.370 Sum_probs=210.2
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
.|++.+.||+|+||.||++.+..+++.||+|.+...... ......+.+|+.+++.++|++++++.+++.+++..++|+|
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 478999999999999999999989999999998754322 2223457789999999999999999999999999999999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
|+.+ +|...+... ....+++..+..++.|++.||.|||+.|++|+||||+||+++.++. ++|+|||++....... .
T Consensus 81 ~~~~g~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~-~kl~Dfg~~~~~~~~~-~ 157 (285)
T cd05631 81 IMNGGDLKFHIYNM-GNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGH-IRISDLGLAVQIPEGE-T 157 (285)
T ss_pred ecCCCcHHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCC-EEEeeCCCcEEcCCCC-e
Confidence 9985 776665432 2335899999999999999999999999999999999999998876 9999999987653322 2
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
.....|+..|+|||.+.+. .++.++||||+|+++|+|++|+.||......................
T Consensus 158 ~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~------------- 223 (285)
T cd05631 158 VRGRVGTVGYMAPEVINNE-KYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEE------------- 223 (285)
T ss_pred ecCCCCCCCccCHhhhcCC-CCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccccc-------------
Confidence 2345689999999998764 48999999999999999999999998765433322222211111000
Q ss_pred cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC-----HHHHhcCCCCCCC
Q psy6391 253 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN-----AENALKHKYFADK 303 (313)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~e~l~h~~~~~~ 303 (313)
+ ...++.++.+||++||+.||.+||+ ++++++||||.+.
T Consensus 224 -~-----------~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05631 224 -Y-----------SEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNI 267 (285)
T ss_pred -C-----------CccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence 0 1247899999999999999999997 9999999999884
No 58
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3.2e-45 Score=313.47 Aligned_cols=285 Identities=52% Similarity=0.924 Sum_probs=227.6
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
.+++|++.+.||.|++|.||++.++.+++.|++|.+....... ....+.+|+.+++.++|+||+++++++.+++..++|
T Consensus 3 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 3 KLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG-APFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred CccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC-CchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence 4689999999999999999999999889999999987654322 234567899999999999999999999999999999
Q ss_pred EeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 92 FEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 92 ~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
|||++++|.+.+.... ..+++..++.++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||.+........
T Consensus 82 ~e~~~~~L~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~-~kl~dfg~~~~~~~~~~ 158 (291)
T cd07844 82 FEYLDTDLKQYMDDCG--GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGE-LKLADFGLARAKSVPSK 158 (291)
T ss_pred EecCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCC-EEECccccccccCCCCc
Confidence 9999999888876532 35899999999999999999999999999999999999998877 99999999876543322
Q ss_pred ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHhcCCCCCCCCCCCCCCCCc
Q psy6391 172 IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS-EIDQLFRIFRVLTTPTEDNWPGVSKLPDY 250 (313)
Q Consensus 172 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (313)
......++..|+|||.+.+...++.++|+||+|+++|+|++|..||.... ..+....+......+....++.......+
T Consensus 159 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (291)
T cd07844 159 TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEF 238 (291)
T ss_pred cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccc
Confidence 22334567889999988765557899999999999999999999997665 45556666666666655555544433222
Q ss_pred ccc-CCCCchhhhhhhccCCC--HHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 251 KTT-FPEWSNFCLDKHVKNLD--QDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 251 ~~~-~~~~~~~~~~~~~~~~~--~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
... .+.............++ .++.+++.+||+.+|++|||+.++++||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 239 KPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred ccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 211 11222222333334555 899999999999999999999999999998
No 59
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.7e-46 Score=330.77 Aligned_cols=285 Identities=35% Similarity=0.549 Sum_probs=221.7
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc-----EEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENY-----RLY 89 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~ 89 (313)
+|++.+.||+|++|.||++.+..+++.||+|.+............+.+|+.+++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 588999999999999999999889999999998654333333467889999999999999999999998776 789
Q ss_pred EEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 90 LIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 90 lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
+|+||+.++|...+.. ...+++..++.++.||+.||.|||+.|++|+||||+|||++.++. ++|+|||++......
T Consensus 81 lv~e~~~~~l~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~-~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 81 VVTELMQSDLHKIIVS---PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCV-LKICDFGLARVEEPD 156 (372)
T ss_pred EEeeccccCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCC-EEeccccceeecccC
Confidence 9999999988777653 345899999999999999999999999999999999999998877 999999998765332
Q ss_pred C-cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC-C
Q psy6391 170 V-RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK-L 247 (313)
Q Consensus 170 ~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 247 (313)
. .......++..|+|||.+.+...++.++||||+|+++|+|++|+.||...+.......+....+.+....+..... .
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 236 (372)
T cd07853 157 ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGA 236 (372)
T ss_pred ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHH
Confidence 2 2223346788899999987766678999999999999999999999999888877777766554443221110000 0
Q ss_pred CCccccCCCC--chhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 248 PDYKTTFPEW--SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 248 ~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
.......+.. ............++++.+||.+||+.||++|||+.|+|+||||.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 237 RAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred HHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence 0000000000 0000001113468899999999999999999999999999999884
No 60
>KOG0201|consensus
Probab=100.00 E-value=3.6e-48 Score=325.29 Aligned_cols=260 Identities=29% Similarity=0.471 Sum_probs=221.4
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
..|..++.||+|+||.||+|.+..+++.||+|++........ .+.+.+|+.++.+++++||.++++.|..+..++++||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~de-Iediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDE-IEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchh-hHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 357778999999999999999999999999999988765544 3788999999999999999999999999999999999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
|+.| ++.+++. .+..+.+..+..++++++.|+.|||.++.+|+|||+.||++..+|+ ++|+|||++.........
T Consensus 92 y~~gGsv~~lL~---~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~-vkl~DfgVa~ql~~~~~r 167 (467)
T KOG0201|consen 92 YCGGGSVLDLLK---SGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGD-VKLADFGVAGQLTNTVKR 167 (467)
T ss_pred HhcCcchhhhhc---cCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCc-EEEEecceeeeeechhhc
Confidence 9986 6556655 3555688899999999999999999999999999999999999977 999999999988766666
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
....+||+.|||||++... .++.++||||||++.++|++|.+|+....+......+-+ ..+|..+
T Consensus 168 r~tfvGTPfwMAPEVI~~~-~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk-~~PP~L~------------- 232 (467)
T KOG0201|consen 168 RKTFVGTPFWMAPEVIKQS-GYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPK-SAPPRLD------------- 232 (467)
T ss_pred cccccccccccchhhhccc-cccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccC-CCCCccc-------------
Confidence 6778999999999999854 499999999999999999999999998777333222211 0111111
Q ss_pred cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCC
Q psy6391 253 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP 307 (313)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~ 307 (313)
...++.+++|+..||+.||+.||+|.++|.|+|++....-+
T Consensus 233 --------------~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~k~s 273 (467)
T KOG0201|consen 233 --------------GDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAKKTS 273 (467)
T ss_pred --------------cccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcCCch
Confidence 13789999999999999999999999999999999855333
No 61
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.2e-46 Score=327.01 Aligned_cols=284 Identities=34% Similarity=0.589 Sum_probs=218.4
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc----
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENY---- 86 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---- 86 (313)
..+++|++.+.||+|++|.||++.+..+++.||+|++............+.+|+.+++.++||||+++++++...+
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 4679999999999999999999999989999999999765444444567889999999999999999999987443
Q ss_pred --EEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcc
Q psy6391 87 --RLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLAR 164 (313)
Q Consensus 87 --~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~ 164 (313)
..++||||+++++...+.. .+++..+..++.||+.||.|||++|++|+||||+||+++.++. ++|+|||++.
T Consensus 98 ~~~~~lv~e~~~~~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~-~kl~Dfg~a~ 171 (359)
T cd07876 98 FQDVYLVMELMDANLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFGLAR 171 (359)
T ss_pred cceeEEEEeCCCcCHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCC-EEEecCCCcc
Confidence 5799999999987776642 3788999999999999999999999999999999999999877 9999999987
Q ss_pred ccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCC
Q psy6391 165 AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 244 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
..... .......++..|+|||.+.+. .++.++||||||+++|+|++|+.||...+..............+....+...
T Consensus 172 ~~~~~-~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (359)
T cd07876 172 TACTN-FMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRL 249 (359)
T ss_pred ccccC-ccCCCCcccCCCCCchhccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHH
Confidence 64332 222345678899999998764 4789999999999999999999999988776665555554433322111000
Q ss_pred C-----------CCC--CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 245 S-----------KLP--DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 245 ~-----------~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
. ..+ .+...++.+............++++.+||.+||+.||.+|||+.|+|+||||+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 250 QPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred HHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 0 000 000011111100000111235788999999999999999999999999999975
No 62
>KOG0694|consensus
Probab=100.00 E-value=3.8e-46 Score=328.75 Aligned_cols=261 Identities=24% Similarity=0.399 Sum_probs=227.5
Q ss_pred hhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccC-CCCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCc
Q psy6391 9 VKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEN-DDEGIPATAIREISVLKEL-NHPNIVQLHDTMIENY 86 (313)
Q Consensus 9 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 86 (313)
.+..+++|..++.||+|+||+|+++..+.+++.||||+++++. ...+..+..+.|..++... +||.++.++..|...+
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 4677899999999999999999999999999999999999876 3334457788899998888 5999999999999999
Q ss_pred EEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 87 RLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 87 ~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
++++||||+.|+ +++ .......+++..++-++..++.||.|||++||+|+|||.+|||+|.+|. +||+|||+++..
T Consensus 443 ~l~fvmey~~Gg--dm~-~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh-~kiADFGlcKe~ 518 (694)
T KOG0694|consen 443 HLFFVMEYVAGG--DLM-HHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGH-VKIADFGLCKEG 518 (694)
T ss_pred eEEEEEEecCCC--cEE-EEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCc-EEeccccccccc
Confidence 999999999987 333 3334456999999999999999999999999999999999999999998 999999999876
Q ss_pred CCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 167 GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
-.........+||+.|+|||++.+.. |+.+.|.|||||+||+||.|+.||.+.+.++.++.+....-
T Consensus 519 m~~g~~TsTfCGTpey~aPEil~e~~-Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~------------ 585 (694)
T KOG0694|consen 519 MGQGDRTSTFCGTPEFLAPEVLTEQS-YTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEV------------ 585 (694)
T ss_pred CCCCCccccccCChhhcChhhhccCc-ccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCC------------
Confidence 43334556779999999999987654 99999999999999999999999999999999999876211
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC-----HHHHhcCCCCCCC
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN-----AENALKHKYFADK 303 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~e~l~h~~~~~~ 303 (313)
.+| ..+|.+..++++++|..||++|.- +.+|..||||...
T Consensus 586 ------~yP-----------~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i 630 (694)
T KOG0694|consen 586 ------RYP-----------RFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSI 630 (694)
T ss_pred ------CCC-----------CcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccC
Confidence 111 248999999999999999999995 5899999999983
No 63
>KOG0589|consensus
Probab=100.00 E-value=4.7e-47 Score=325.75 Aligned_cols=259 Identities=30% Similarity=0.511 Sum_probs=236.9
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcE-EEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYR-LYL 90 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-~~l 90 (313)
.+++|.+++.+|+|+||.++.++++.+++.|++|.+..........+...+|+.+++++.||||+.+.+.|+.++. .+|
T Consensus 2 ~m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 2 EMDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred ccchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence 5789999999999999999999999999999999999988777777788999999999999999999999999888 999
Q ss_pred EEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 91 IFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 91 v~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
+|+|++| ++.+.+...+ +..++++++..|+-||+.|+.|||+++|+|+|||+.||+++.++. ++|+|||+++..+..
T Consensus 82 vm~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~-VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKK-VKLGDFGLAKILNPE 159 (426)
T ss_pred EEeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCc-eeecchhhhhhcCCc
Confidence 9999986 7777777654 566899999999999999999999999999999999999999987 799999999999877
Q ss_pred CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy6391 170 VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 249 (313)
Q Consensus 170 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (313)
.......+||+.|++||.+.+. ++..++|||||||++|+|++-+++|...+....+.++.+....|.+.
T Consensus 160 ~~~a~tvvGTp~YmcPEil~d~-pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~---------- 228 (426)
T KOG0589|consen 160 DSLASTVVGTPYYMCPEILSDI-PYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPS---------- 228 (426)
T ss_pred hhhhheecCCCcccCHHHhCCC-CCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCc----------
Confidence 6666778999999999988764 59999999999999999999999999999999999999876444433
Q ss_pred ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCC
Q psy6391 250 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA 301 (313)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~ 301 (313)
..+.++..+|..||..+|..||++.++|.+|.+.
T Consensus 229 ------------------~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 229 ------------------MYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL 262 (426)
T ss_pred ------------------cccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence 4789999999999999999999999999998877
No 64
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=4e-46 Score=327.29 Aligned_cols=258 Identities=29% Similarity=0.455 Sum_probs=216.4
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
++|++.+.||+|++|.||+|.+..+++.||+|++...... ......+.+|+.++..++|++|+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 4799999999999999999999999999999999765322 233466788999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCC-
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV- 170 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~- 170 (313)
||+.+ +|.+.+... +.+++..++.++.||+.||.|||+.|++|+||||+||+++.++. ++|+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~-~kL~Dfg~~~~~~~~~~ 156 (350)
T cd05573 81 EYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGH-IKLADFGLCKKMNKAKD 156 (350)
T ss_pred cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCC-EEeecCCCCccCcccCc
Confidence 99975 888887653 45899999999999999999999999999999999999999877 9999999987654332
Q ss_pred ----------------------------cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCCh
Q psy6391 171 ----------------------------RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE 222 (313)
Q Consensus 171 ----------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~ 222 (313)
.......|+..|+|||.+.+. .++.++||||||+++|+|++|..||.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT-PYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCC-CCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 222345689999999998765 589999999999999999999999998887
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC-HHHHhcCCCCC
Q psy6391 223 IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN-AENALKHKYFA 301 (313)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-~~e~l~h~~~~ 301 (313)
.....++......... +. ...+++++.+||.+||. ||.+||+ +.++++||||+
T Consensus 236 ~~~~~~i~~~~~~~~~----------------p~---------~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~ 289 (350)
T cd05573 236 QETYNKIINWKESLRF----------------PP---------DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFK 289 (350)
T ss_pred HHHHHHHhccCCcccC----------------CC---------CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcC
Confidence 6666655441111100 00 02368999999999998 9999999 99999999998
Q ss_pred C
Q psy6391 302 D 302 (313)
Q Consensus 302 ~ 302 (313)
+
T Consensus 290 ~ 290 (350)
T cd05573 290 G 290 (350)
T ss_pred C
Confidence 7
No 65
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.9e-45 Score=326.03 Aligned_cols=277 Identities=26% Similarity=0.308 Sum_probs=212.6
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
...+|++++.||+|++|.||++.+..+++.||+|.... ..+.+|+.+++.++||||+++++++..+...+++
T Consensus 90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv 161 (391)
T PHA03212 90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLI 161 (391)
T ss_pred ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEE
Confidence 44689999999999999999999999999999997532 3567899999999999999999999999999999
Q ss_pred EeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCC-CC
Q psy6391 92 FEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGV-PV 170 (313)
Q Consensus 92 ~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~-~~ 170 (313)
+|++.++|...+.. ...+++..+..++.||+.||.|||++||+|+||||+|||++.++. ++|+|||++..... ..
T Consensus 162 ~e~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~-vkL~DFG~a~~~~~~~~ 237 (391)
T PHA03212 162 LPRYKTDLYCYLAA---KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGD-VCLGDFGAACFPVDINA 237 (391)
T ss_pred EecCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCC-EEEEeCCcccccccccc
Confidence 99999988877764 234889999999999999999999999999999999999998877 99999999865322 22
Q ss_pred cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCC-------ChHHHHHHHHHhcCCCCCCCCCC
Q psy6391 171 RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGD-------SEIDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 171 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
.......||..|+|||++... .++.++||||||+++|+|++|..||... .....+..+....+.++.....+
T Consensus 238 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 238 NKYYGWAGTIATNAPELLARD-PYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred cccccccCccCCCChhhhcCC-CCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 223345789999999998764 4899999999999999999999877532 22334444544443332211100
Q ss_pred C-CCCCCcc-------ccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 244 V-SKLPDYK-------TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 244 ~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
. ..+.... ...+.. .........++.++.+||.+||+.||.+|||+.|+|+||||++.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~ 382 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGS--RPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI 382 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCC--CCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence 0 0000000 000000 00001123467899999999999999999999999999999884
No 66
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=8.2e-46 Score=320.13 Aligned_cols=248 Identities=29% Similarity=0.447 Sum_probs=206.8
Q ss_pred eccccceEEEEEEeCcCCcEEEEEEecccC-CCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc-CH
Q psy6391 22 IGEGTYGVVYKAKNKVTGALVAIKKIRMEN-DDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM-DL 99 (313)
Q Consensus 22 lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~-~l 99 (313)
||+|+||.||++.+..+++.||+|++.... ........+.+|+.+++.++||||+++++++.+++..++||||+++ +|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999999899999999987543 1222235677899999999999999999999999999999999986 77
Q ss_pred HHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccccccccc
Q psy6391 100 KKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHEVVT 179 (313)
Q Consensus 100 ~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 179 (313)
.+.+.. .+.+++..+..++.||+.||.|||++|++|+||||+||+++.++. ++|+|||++..............|+
T Consensus 81 ~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~-~kl~Dfg~~~~~~~~~~~~~~~~gt 156 (312)
T cd05585 81 FHHLQR---EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGH-IALCDFGLCKLNMKDDDKTNTFCGT 156 (312)
T ss_pred HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCc-EEEEECcccccCccCCCccccccCC
Confidence 777754 345899999999999999999999999999999999999998877 9999999987543332333345689
Q ss_pred ccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCch
Q psy6391 180 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN 259 (313)
Q Consensus 180 ~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (313)
..|+|||.+.+. .++.++||||+|+++|+|++|..||...........+...... ++
T Consensus 157 ~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~------------------~~---- 213 (312)
T cd05585 157 PEYLAPELLLGH-GYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLR------------------FP---- 213 (312)
T ss_pred cccCCHHHHcCC-CCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCC------------------CC----
Confidence 999999998764 4799999999999999999999999987776665554431100 00
Q ss_pred hhhhhhccCCCHHHHHHHHHHhccCCCCCC---CHHHHhcCCCCCCC
Q psy6391 260 FCLDKHVKNLDQDGLDLLEKTLIYCPATRI---NAENALKHKYFADK 303 (313)
Q Consensus 260 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp---s~~e~l~h~~~~~~ 303 (313)
..+++++.+||.+||+.||.+|| ++.++++||||++.
T Consensus 214 -------~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 214 -------DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred -------CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 24789999999999999999997 68999999999974
No 67
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.7e-45 Score=323.74 Aligned_cols=287 Identities=34% Similarity=0.558 Sum_probs=219.9
Q ss_pred hhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC---
Q psy6391 9 VKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN--- 85 (313)
Q Consensus 9 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--- 85 (313)
.-..+++|++.+.||+|++|.||.+.+..+++.+++|.+............+.+|+.+++.++||||+++++++...
T Consensus 12 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 91 (355)
T cd07874 12 TFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSL 91 (355)
T ss_pred hhhhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccc
Confidence 33567999999999999999999999998999999999976554444456778899999999999999999988643
Q ss_pred ---cEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCC
Q psy6391 86 ---YRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGL 162 (313)
Q Consensus 86 ---~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~ 162 (313)
...++||||+++++...+.. .+++..++.++.||+.||.|||++|++|+||||+||+++.++. ++|+|||+
T Consensus 92 ~~~~~~~lv~e~~~~~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~-~kl~Dfg~ 165 (355)
T cd07874 92 EEFQDVYLVMELMDANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFGL 165 (355)
T ss_pred cccceeEEEhhhhcccHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCC-EEEeeCcc
Confidence 35799999999988776653 3788999999999999999999999999999999999998877 99999999
Q ss_pred ccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCC
Q psy6391 163 ARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 242 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
+...+... ......++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...+..............+....+.
T Consensus 166 ~~~~~~~~-~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (355)
T cd07874 166 ARTAGTSF-MMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 243 (355)
T ss_pred cccCCCcc-ccCCccccCCccCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 97654332 22345678999999998764 48899999999999999999999999887766666555544333221111
Q ss_pred CCCC--------CCC-----ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 243 GVSK--------LPD-----YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 243 ~~~~--------~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
.... .+. +...++..............+.++.+||.+||+.||.+|||+.|+|+||||...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred hhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 0000 000 000000000000000112356788999999999999999999999999999753
No 68
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.1e-45 Score=323.16 Aligned_cols=284 Identities=33% Similarity=0.560 Sum_probs=221.0
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC-----
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN----- 85 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 85 (313)
..+++|++.+.||+|++|.||.+.+..+++.|++|++............+.+|+.+++.++||||+++++++...
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 457899999999999999999999998999999999976554444456788999999999999999999987643
Q ss_pred -cEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcc
Q psy6391 86 -YRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLAR 164 (313)
Q Consensus 86 -~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~ 164 (313)
...++||||+++++...+.. .++...++.++.|++.||.|||++|++|+||||+||+++.++. ++|+|||++.
T Consensus 101 ~~~~~lv~e~~~~~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~-~kL~DfG~a~ 174 (364)
T cd07875 101 FQDVYIVMELMDANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFGLAR 174 (364)
T ss_pred cCeEEEEEeCCCCCHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCc-EEEEeCCCcc
Confidence 35799999999988877653 2788999999999999999999999999999999999998877 9999999997
Q ss_pred ccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCC
Q psy6391 165 AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 244 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
..+... ......++..|+|||.+.+. .++.++||||||+++|+|++|+.||...+.......+......+.+..+...
T Consensus 175 ~~~~~~-~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (364)
T cd07875 175 TAGTSF-MMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 252 (364)
T ss_pred ccCCCC-cccCCcccCCcCCHHHHhCC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh
Confidence 654332 22344678999999998764 4889999999999999999999999988887777777665544433221111
Q ss_pred CCC--------CCcc-----ccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 245 SKL--------PDYK-----TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 245 ~~~--------~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
... +.+. ..++..............+.++.+||.+||+.||.+|||+.++|+||||..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred hHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 100 0000 000000000000011124678999999999999999999999999999975
No 69
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=6e-45 Score=317.20 Aligned_cols=284 Identities=24% Similarity=0.412 Sum_probs=214.1
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
-++|++++.||+|++|.||++.+..++..+++|.+..... ......+.+|+.+++.++||||+++++++.+++..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence 4789999999999999999999999999999999875422 222357889999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCCEEEecCCCeEEEecCCCccccCCCC
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKR-RVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV 170 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~-~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~ 170 (313)
||+++ +|.+++.. ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++. ++|+|||++.......
T Consensus 83 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~-~kl~Dfg~~~~~~~~~ 158 (331)
T cd06649 83 EHMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE-IKLCDFGVSGQLIDSM 158 (331)
T ss_pred ecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCc-EEEccCcccccccccc
Confidence 99986 88887765 23489999999999999999999986 6999999999999998877 9999999987653322
Q ss_pred cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC-
Q psy6391 171 RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD- 249 (313)
Q Consensus 171 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 249 (313)
.....|+..|+|||.+.+. .++.++||||||+++|+|++|..||...+..+.........................
T Consensus 159 --~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (331)
T cd06649 159 --ANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRP 235 (331)
T ss_pred --cccCCCCcCcCCHhHhcCC-CCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccc
Confidence 2344688999999998764 489999999999999999999999987665443322211100000000000000000
Q ss_pred -------cc-ccCCCCc-----hhhhhh-----hccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCC
Q psy6391 250 -------YK-TTFPEWS-----NFCLDK-----HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 304 (313)
Q Consensus 250 -------~~-~~~~~~~-----~~~~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~ 304 (313)
.. ...+... ...... ....+++++.+||.+||+.||++|||+.++++||||+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 236 PGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred ccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 00 0000000 000000 0124788999999999999999999999999999998753
No 70
>KOG0599|consensus
Probab=100.00 E-value=4.1e-47 Score=301.26 Aligned_cols=264 Identities=30% Similarity=0.488 Sum_probs=228.3
Q ss_pred hhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCC------CchhHHHHHHHHhhc-CCCCceeecee
Q psy6391 9 VKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEG------IPATAIREISVLKEL-NHPNIVQLHDT 81 (313)
Q Consensus 9 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~------~~~~~~~e~~~l~~l-~~~~i~~~~~~ 81 (313)
-......|.-.+.||.|..++|-++.++.++..+++|++........ ..+.-..|+.+|+++ .||+|+++.++
T Consensus 12 a~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ 91 (411)
T KOG0599|consen 12 AKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDV 91 (411)
T ss_pred HhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeee
Confidence 34567788889999999999999999999999999999875542221 123344689999998 79999999999
Q ss_pred EEeCcEEEEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecC
Q psy6391 82 MIENYRLYLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADF 160 (313)
Q Consensus 82 ~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df 160 (313)
|+.+...++|+|.++ |.|.+++.. .-.+++.+.+++++|++.++.|||.++|||+|+||+|||++.+-+ ++|+||
T Consensus 92 yes~sF~FlVFdl~prGELFDyLts---~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~-i~isDF 167 (411)
T KOG0599|consen 92 YESDAFVFLVFDLMPRGELFDYLTS---KVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMN-IKISDF 167 (411)
T ss_pred ccCcchhhhhhhhcccchHHHHhhh---heeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccc-eEEecc
Confidence 999999999999997 688888775 345999999999999999999999999999999999999999988 999999
Q ss_pred CCccccCCCCcccccccccccccchhhhcC-----CCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCC
Q psy6391 161 GLARAFGVPVRIYTHEVVTLWYRAPEVLLG-----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT 235 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-----~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~ 235 (313)
|+++....+.. ....+||++|+|||.+.. .+.++...|+|++|++||-|+.|.+||.......++..++.+...
T Consensus 168 GFa~~l~~Gek-LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyq 246 (411)
T KOG0599|consen 168 GFACQLEPGEK-LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQ 246 (411)
T ss_pred ceeeccCCchh-HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccc
Confidence 99999876544 456799999999999853 345889999999999999999999999988888888888876665
Q ss_pred CCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 236 PTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
...+.|. .++...++||.+||+.||++|.|+.|+|+||||.+
T Consensus 247 F~speWa-------------------------dis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q 288 (411)
T KOG0599|consen 247 FRSPEWA-------------------------DISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ 288 (411)
T ss_pred cCCcchh-------------------------hccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence 5555554 37899999999999999999999999999999954
No 71
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.1e-45 Score=320.65 Aligned_cols=250 Identities=26% Similarity=0.408 Sum_probs=207.5
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc-
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM- 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~- 97 (313)
+.||+|+||.||++.+..++..||+|++..... .......+.+|+.+++.++||||+++++.+...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 468999999999999998999999999976432 122234567899999999999999999999999999999999986
Q ss_pred CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccccccc
Q psy6391 98 DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHEV 177 (313)
Q Consensus 98 ~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~~ 177 (313)
+|...+.. ...+++..++.++.||+.||.|||++|++|+||||+|||++.++. ++|+|||++..............
T Consensus 81 ~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~-~kL~Dfg~~~~~~~~~~~~~~~~ 156 (323)
T cd05595 81 ELFFHLSR---ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFC 156 (323)
T ss_pred cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCC-EEecccHHhccccCCCCcccccc
Confidence 77666654 345899999999999999999999999999999999999998877 99999998875433222333456
Q ss_pred ccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCC
Q psy6391 178 VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW 257 (313)
Q Consensus 178 ~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (313)
|+..|+|||.+.+. .++.++|+||||+++|+|++|..||...+.......+...... ++
T Consensus 157 gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~------------------~p-- 215 (323)
T cd05595 157 GTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR------------------FP-- 215 (323)
T ss_pred CCcCcCCcccccCC-CCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC------------------CC--
Confidence 89999999998654 4799999999999999999999999887776665555431110 01
Q ss_pred chhhhhhhccCCCHHHHHHHHHHhccCCCCCC-----CHHHHhcCCCCCCC
Q psy6391 258 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK 303 (313)
Q Consensus 258 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~e~l~h~~~~~~ 303 (313)
..+++++.++|.+||+.||.+|| ++.++++||||.+.
T Consensus 216 ---------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 216 ---------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred ---------CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence 24789999999999999999998 99999999999873
No 72
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.4e-45 Score=320.59 Aligned_cols=250 Identities=26% Similarity=0.428 Sum_probs=206.7
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc-
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM- 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~- 97 (313)
+.||+|++|.||++.+..+++.||+|++..... .......+.+|+.+++.++||+|+++++.+..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 368999999999999999999999999975432 222235677899999999999999999999999999999999986
Q ss_pred CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccccccc
Q psy6391 98 DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHEV 177 (313)
Q Consensus 98 ~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~~ 177 (313)
+|...+.. ...+++..++.++.||+.||+|||++|++|+||||+|||++.++. ++|+|||++..............
T Consensus 81 ~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~-~kL~DfG~~~~~~~~~~~~~~~~ 156 (328)
T cd05593 81 ELFFHLSR---ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGH-IKITDFGLCKEGITDAATMKTFC 156 (328)
T ss_pred CHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCc-EEEecCcCCccCCCccccccccc
Confidence 77666653 345899999999999999999999999999999999999998877 99999999875433223333456
Q ss_pred ccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCC
Q psy6391 178 VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW 257 (313)
Q Consensus 178 ~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (313)
|+..|+|||.+.+.. ++.++||||||+++|+|++|..||...+.......+..... .++
T Consensus 157 gt~~y~aPE~~~~~~-~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~------------------~~p-- 215 (328)
T cd05593 157 GTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDI------------------KFP-- 215 (328)
T ss_pred CCcCccChhhhcCCC-CCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCc------------------cCC--
Confidence 899999999987544 78999999999999999999999987766555544332100 001
Q ss_pred chhhhhhhccCCCHHHHHHHHHHhccCCCCCC-----CHHHHhcCCCCCCC
Q psy6391 258 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK 303 (313)
Q Consensus 258 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~e~l~h~~~~~~ 303 (313)
..+++++.+||.+||+.||.+|+ ++.++++||||++.
T Consensus 216 ---------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 216 ---------RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred ---------CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 24789999999999999999997 89999999999873
No 73
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.8e-45 Score=323.19 Aligned_cols=259 Identities=27% Similarity=0.398 Sum_probs=210.4
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
++|++++.||+|++|+||++.+..+++.||+|++..... .......+.+|+.++..++|++|+++++.+.+...+++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 579999999999999999999999999999999975432 2222356778999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
||++| +|.+.+.. .+.+++..++.++.||+.||.|||++|++|+||||+|||++.++. ++|+|||++........
T Consensus 81 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~-vkL~DFGla~~~~~~~~ 156 (363)
T cd05628 81 EFLPGGDMMTLLMK---KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGH-VKLSDFGLCTGLKKAHR 156 (363)
T ss_pred cCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCC-EEEeeccCccccccccc
Confidence 99975 77777764 345899999999999999999999999999999999999998877 99999999865422100
Q ss_pred -----------------------------------ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCC
Q psy6391 172 -----------------------------------IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPL 216 (313)
Q Consensus 172 -----------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~p 216 (313)
.....+||..|+|||.+.+.. ++.++|+||||+++|+|++|..|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTG-YNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCC-CCCchhhhhhHHHHHHHHhCCCC
Confidence 012346899999999987644 78999999999999999999999
Q ss_pred CCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCC---CCCCHHH
Q psy6391 217 FQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPA---TRINAEN 293 (313)
Q Consensus 217 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~---~Rps~~e 293 (313)
|...........+........ ++. ...+++++.++|.+|+. +|. .||+++|
T Consensus 236 f~~~~~~~~~~~i~~~~~~~~----------------~p~---------~~~~s~~~~~li~~l~~-~~~~r~~r~~~~e 289 (363)
T cd05628 236 FCSETPQETYKKVMNWKETLI----------------FPP---------EVPISEKAKDLILRFCC-EWEHRIGAPGVEE 289 (363)
T ss_pred CCCCCHHHHHHHHHcCcCccc----------------CCC---------cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHH
Confidence 998877776666654211110 000 02378999999999775 344 4689999
Q ss_pred HhcCCCCCCC
Q psy6391 294 ALKHKYFADK 303 (313)
Q Consensus 294 ~l~h~~~~~~ 303 (313)
+++||||++.
T Consensus 290 i~~hp~f~~~ 299 (363)
T cd05628 290 IKTNPFFEGV 299 (363)
T ss_pred HhCCCCCCCC
Confidence 9999999873
No 74
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.8e-45 Score=324.68 Aligned_cols=264 Identities=25% Similarity=0.371 Sum_probs=217.2
Q ss_pred hhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcE
Q psy6391 9 VKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELNHPNIVQLHDTMIENYR 87 (313)
Q Consensus 9 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 87 (313)
.....++|++.+.||+|++|.||++.+..+++.||+|++..... .......+.+|+.+++.++||+|+++++++.+++.
T Consensus 38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~ 117 (370)
T cd05596 38 LRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKY 117 (370)
T ss_pred CCCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 44567899999999999999999999999999999999975432 22223457789999999999999999999999999
Q ss_pred EEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 88 LYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 88 ~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
.++||||++| +|.+++.. ..+++..+..++.||+.||.|||+.|++|+||||+|||++.++. ++|+|||++...
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~-~kL~DfG~~~~~ 192 (370)
T cd05596 118 LYMVMEYMPGGDLVNLMSN----YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGH-LKLADFGTCMKM 192 (370)
T ss_pred EEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCC-EEEEeccceeec
Confidence 9999999975 78777654 24789999999999999999999999999999999999998877 999999998765
Q ss_pred CCCCc-ccccccccccccchhhhcCC---CCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCC
Q psy6391 167 GVPVR-IYTHEVVTLWYRAPEVLLGS---QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 242 (313)
Q Consensus 167 ~~~~~-~~~~~~~~~~~~~PE~~~~~---~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
..... ......|+..|+|||.+.+. ..++.++|+||||+++|+|++|..||...........+........ +
T Consensus 193 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~---~- 268 (370)
T cd05596 193 DANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLT---F- 268 (370)
T ss_pred cCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCC---C-
Confidence 43211 22345689999999998643 2478899999999999999999999998877766666654211110 0
Q ss_pred CCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCC--CCCHHHHhcCCCCCC
Q psy6391 243 GVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPAT--RINAENALKHKYFAD 302 (313)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~--Rps~~e~l~h~~~~~ 302 (313)
+. ...+|.++.+||++||+.+|.+ |+++.++++||||++
T Consensus 269 ------------~~---------~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~ 309 (370)
T cd05596 269 ------------PD---------DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKN 309 (370)
T ss_pred ------------CC---------cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCC
Confidence 00 0247899999999999999998 999999999999987
No 75
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=4e-45 Score=311.30 Aligned_cols=282 Identities=63% Similarity=1.130 Sum_probs=247.0
Q ss_pred ceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecc
Q psy6391 16 YEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFM 95 (313)
Q Consensus 16 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 95 (313)
|++.+.||+|++|.||++.+..+++.+++|++............+.+|+.+++.++|++++++++++.+.+..++|+|++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 67889999999999999999988999999999876544555677889999999999999999999999999999999999
Q ss_pred ccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccccc
Q psy6391 96 SMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTH 175 (313)
Q Consensus 96 ~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~ 175 (313)
+++|.+.+.... ..+++..+..++.|++.+|.+||+.|++|+||+|+||+++.++. ++|+|||.+............
T Consensus 81 ~~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~-~~l~d~g~~~~~~~~~~~~~~ 157 (282)
T cd07829 81 DMDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGV-LKLADFGLARAFGIPLRTYTH 157 (282)
T ss_pred CcCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCC-EEEecCCcccccCCCccccCc
Confidence 999988887632 35899999999999999999999999999999999999999877 999999998776554433344
Q ss_pred ccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCC
Q psy6391 176 EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFP 255 (313)
Q Consensus 176 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (313)
..++..|+|||.+.....++.++|+||+|++++++++|..||..........++......+....|+.+..+..+...++
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd07829 158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFP 237 (282)
T ss_pred cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccccc
Confidence 45677899999987654689999999999999999999999999988888888888888888888877777766666777
Q ss_pred CCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 256 EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 256 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
.+........++.++..+.++|.+||..||++||++.+++.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 238 KFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred ccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 776666666677889999999999999999999999999999998
No 76
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=4.5e-45 Score=316.37 Aligned_cols=278 Identities=41% Similarity=0.721 Sum_probs=210.8
Q ss_pred eeeeccccceEEEEEEeC--cCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEe--CcEEEEEEec
Q psy6391 19 VEKIGEGTYGVVYKAKNK--VTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIE--NYRLYLIFEF 94 (313)
Q Consensus 19 ~~~lg~g~~~~v~~~~~~--~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~ 94 (313)
.++||+|+||.||+|.++ .+++.+++|.+.... ....+.+|+.+++.++||||+++++.+.. +..+++++||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG----ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 81 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC----CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence 468999999999999965 467889999986432 23567889999999999999999999864 4578999999
Q ss_pred cccCHHHHHhhCC------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecC---CCeEEEecCCCccc
Q psy6391 95 MSMDLKKYIDTVP------KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAK---SNIVKVADFGLARA 165 (313)
Q Consensus 95 ~~~~l~~~~~~~~------~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~---~~~~~l~df~~~~~ 165 (313)
++++|..++.... ....+++..++.++.||+.||.|||+.|++|+||||+|||++.+ ...++|+|||++..
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 82 AEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred cCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 9999888775422 12358999999999999999999999999999999999999422 23499999999976
Q ss_pred cCCCCc---ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHHhc
Q psy6391 166 FGVPVR---IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE---------IDQLFRIFRVL 233 (313)
Q Consensus 166 ~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~---------~~~~~~~~~~~ 233 (313)
...... ......++..|+|||.+.+...++.++|+||+|+++|+|++|+.||..... .....++....
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 241 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence 543321 223456789999999987766689999999999999999999999975432 34556666666
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCc---------hhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 234 TTPTEDNWPGVSKLPDYKTTFPEWS---------NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
+.+....|......+........+. ...........+.++.+||.+||+.||.+|||++|+|+||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 6666555554433322111110000 001111122456789999999999999999999999999998
No 77
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.9e-44 Score=306.69 Aligned_cols=283 Identities=40% Similarity=0.698 Sum_probs=219.2
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
++|++.+.||+|++|.||++.++.+++.|++|++..........+.+.+|+.+++.++|+|++++++++..+...++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 47999999999999999999999889999999987654444444667899999999999999999999999999999999
Q ss_pred ccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccc
Q psy6391 94 FMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIY 173 (313)
Q Consensus 94 ~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~ 173 (313)
|+++++.+.+.. ....+++..++.++.||+.+|.|||+.|++|+||+|+||+++.++. ++|+|||++..........
T Consensus 81 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~-~~l~dfg~~~~~~~~~~~~ 157 (286)
T cd07847 81 YCDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQ-IKLCDFGFARILTGPGDDY 157 (286)
T ss_pred ccCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCc-EEECccccceecCCCcccc
Confidence 999865554433 2335899999999999999999999999999999999999998876 9999999998765443223
Q ss_pred ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCC---CCCCCCCCCCc
Q psy6391 174 THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED---NWPGVSKLPDY 250 (313)
Q Consensus 174 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 250 (313)
....++..|+|||.+.+...++.++|+||+|+++|+|++|..||......+....+.......... .+.........
T Consensus 158 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07847 158 TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGL 237 (286)
T ss_pred cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccc
Confidence 344567889999998765567899999999999999999999999877766655544432221110 00000000000
Q ss_pred cccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 251 KTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
....+ ..........+.++..+.+|+.+||+.||++||++.+++.||||
T Consensus 238 ~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 238 SIPEP-ETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred cCCCc-ccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 00000 00011222345679999999999999999999999999999998
No 78
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.4e-45 Score=325.44 Aligned_cols=259 Identities=29% Similarity=0.464 Sum_probs=211.8
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
++|++++.||+|++|.||++.+..+++.||+|++..... .......+.+|+.+++.++|+||+++++++.+++.+++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 479999999999999999999999999999999976432 2222356778999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
||+.+ +|.+.+.. .+.+++..++.++.||+.||.|||+.|++|+||||+|||++.++. ++|+|||++........
T Consensus 81 E~~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~-~kl~Dfg~~~~~~~~~~ 156 (364)
T cd05599 81 EYLPGGDMMTLLMK---KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGH-IKLSDFGLCTGLKKSHR 156 (364)
T ss_pred CCCCCcHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCC-EEEeecccceecccccc
Confidence 99975 77777654 345899999999999999999999999999999999999999887 99999999865422110
Q ss_pred --------------------------------------ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhC
Q psy6391 172 --------------------------------------IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 213 (313)
Q Consensus 172 --------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g 213 (313)
.....+||+.|+|||++.... ++.++|||||||++|+|++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTG-YNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCC-CCCeeeeecchhHHHHhhcC
Confidence 011235899999999987644 78999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC---
Q psy6391 214 KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN--- 290 (313)
Q Consensus 214 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps--- 290 (313)
..||...........+........ ++. ...+++++.+||.+|+. +|.+|++
T Consensus 236 ~~Pf~~~~~~~~~~~i~~~~~~~~----------------~~~---------~~~~s~~~~~li~~ll~-~p~~R~~~~~ 289 (364)
T cd05599 236 YPPFCSDNPQETYRKIINWKETLQ----------------FPD---------EVPLSPEAKDLIKRLCC-EAERRLGNNG 289 (364)
T ss_pred CCCCCCCCHHHHHHHHHcCCCccC----------------CCC---------CCCCCHHHHHHHHHHcc-CHhhcCCCCC
Confidence 999998877666555543111000 000 01478999999999997 8999998
Q ss_pred HHHHhcCCCCCCC
Q psy6391 291 AENALKHKYFADK 303 (313)
Q Consensus 291 ~~e~l~h~~~~~~ 303 (313)
+.++++||||++.
T Consensus 290 ~~~ll~h~~~~~~ 302 (364)
T cd05599 290 VNEIKSHPFFKGV 302 (364)
T ss_pred HHHHhcCCCcCCC
Confidence 9999999999873
No 79
>KOG0611|consensus
Probab=100.00 E-value=1.6e-46 Score=312.74 Aligned_cols=260 Identities=30% Similarity=0.485 Sum_probs=229.4
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccC-CCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEN-DDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
--+|++.+.||+|.+|.|-+++....|+.||||.++++. .+....-.+.+|++++..++||||+.++++|+..+.++||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 347999999999999999999998899999999998876 3333346788999999999999999999999999999999
Q ss_pred Eecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCC
Q psy6391 92 FEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV 170 (313)
Q Consensus 92 ~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~ 170 (313)
|||..+ .|++++... +.+++.+++.+++||.+|+.|+|.++++|+|||.+|||+|.+++ +||+|||++......
T Consensus 132 MEYaS~GeLYDYiSer---~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~N-iKIADFGLSNly~~~- 206 (668)
T KOG0611|consen 132 MEYASGGELYDYISER---GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNN-IKIADFGLSNLYADK- 206 (668)
T ss_pred EEecCCccHHHHHHHh---ccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCC-eeeeccchhhhhccc-
Confidence 999985 888888764 45999999999999999999999999999999999999999999 999999999877543
Q ss_pred cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCc
Q psy6391 171 RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY 250 (313)
Q Consensus 171 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (313)
...+..+|++.|.+||.+.+.++-++..|.||||++||-|..|..||++.+...+..++.++.-..
T Consensus 207 kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrE-------------- 272 (668)
T KOG0611|consen 207 KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYRE-------------- 272 (668)
T ss_pred cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccC--------------
Confidence 556778999999999999888878999999999999999999999999998888888876643221
Q ss_pred cccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCC
Q psy6391 251 KTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP 307 (313)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~ 307 (313)
+.-|..+.-||+.||..||++|.|+.++-+|=|++=+...|
T Consensus 273 ----------------P~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNwgy~~~ 313 (668)
T KOG0611|consen 273 ----------------PETPSDASGLIRWMLMVNPERRATIEDIASHWWVNWGYNMP 313 (668)
T ss_pred ----------------CCCCchHHHHHHHHHhcCcccchhHHHHhhhheeecccccc
Confidence 23568889999999999999999999999999987654443
No 80
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.5e-45 Score=317.80 Aligned_cols=252 Identities=25% Similarity=0.396 Sum_probs=207.8
Q ss_pred ceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHH---hhcCCCCceeeceeEEeCcEEEEE
Q psy6391 16 YEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVL---KELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 16 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l---~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
|++++.||+|++|.||++.+..+++.||+|+++.... .....+.+.+|..++ +.++||||+++++++.+.+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 7889999999999999999999999999999975431 122235566666655 456799999999999999999999
Q ss_pred Eecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCC
Q psy6391 92 FEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV 170 (313)
Q Consensus 92 ~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~ 170 (313)
|||+++ +|...+. ...+++..++.++.||+.||.|||+.|++|+||||+||+++.++. ++|+|||++.......
T Consensus 81 ~E~~~~~~L~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~-~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 81 MEYAAGGDLMMHIH----TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGF-VKIADFGLCKEGMGFG 155 (324)
T ss_pred EcCCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCc-EEeCcccCCccCCCCC
Confidence 999986 6655543 235899999999999999999999999999999999999999877 9999999886543332
Q ss_pred cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCc
Q psy6391 171 RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY 250 (313)
Q Consensus 171 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (313)
.......|+..|+|||.+.+. .++.++|+||||+++|+|++|..||...+.......+.......
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~-------------- 220 (324)
T cd05589 156 DRTSTFCGTPEFLAPEVLTET-SYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRY-------------- 220 (324)
T ss_pred CcccccccCccccCHhHhcCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC--------------
Confidence 333445689999999998764 47899999999999999999999999887776666554421110
Q ss_pred cccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCC-----CHHHHhcCCCCCC
Q psy6391 251 KTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFAD 302 (313)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~e~l~h~~~~~ 302 (313)
+ ..+++++.++|.+||+.||.+|| ++.++++||||++
T Consensus 221 ----p-----------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~ 262 (324)
T cd05589 221 ----P-----------RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRD 262 (324)
T ss_pred ----C-----------CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCC
Confidence 0 24789999999999999999999 7999999999987
No 81
>KOG0610|consensus
Probab=100.00 E-value=1.8e-45 Score=307.08 Aligned_cols=266 Identities=24% Similarity=0.361 Sum_probs=226.2
Q ss_pred chhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhcCCCCceeeceeEEeC
Q psy6391 7 DDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKELNHPNIVQLHDTMIEN 85 (313)
Q Consensus 7 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 85 (313)
....-.++.|++++.||.|.-|+||++..+.++..+|+|++.+.... .....+...|-+||+.++||.++.+++.|+.+
T Consensus 70 ~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~ 149 (459)
T KOG0610|consen 70 KDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETD 149 (459)
T ss_pred CCCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecc
Confidence 44556678999999999999999999999999999999999877532 33346677899999999999999999999999
Q ss_pred cEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcc
Q psy6391 86 YRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLAR 164 (313)
Q Consensus 86 ~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~ 164 (313)
...+++||||+| +|..+.+++ +++.++++.++-.+..++.||+|||-.|||++||||+|||+.++|. ++|+||+++.
T Consensus 150 ~~~cl~meyCpGGdL~~LrqkQ-p~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGH-IMLsDFDLS~ 227 (459)
T KOG0610|consen 150 KYSCLVMEYCPGGDLHSLRQKQ-PGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGH-IMLSDFDLSL 227 (459)
T ss_pred ceeEEEEecCCCccHHHHHhhC-CCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCc-EEeeeccccc
Confidence 999999999986 777777764 5677999999999999999999999999999999999999999988 9999998874
Q ss_pred ccCC---------------------------------C-C----------------------cccccccccccccchhhh
Q psy6391 165 AFGV---------------------------------P-V----------------------RIYTHEVVTLWYRAPEVL 188 (313)
Q Consensus 165 ~~~~---------------------------------~-~----------------------~~~~~~~~~~~~~~PE~~ 188 (313)
.... . . ......+||-.|.|||++
T Consensus 228 ~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI 307 (459)
T KOG0610|consen 228 RCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVI 307 (459)
T ss_pred cCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceee
Confidence 3310 0 0 011123678899999999
Q ss_pred cCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccC
Q psy6391 189 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 268 (313)
Q Consensus 189 ~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (313)
.+.+ -+.+.|.|+||+++|||+.|..||.+.+..+.+..+.......+.. +.
T Consensus 308 ~G~G-HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~---------------------------~~ 359 (459)
T KOG0610|consen 308 RGEG-HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEE---------------------------PE 359 (459)
T ss_pred ecCC-CCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCC---------------------------Cc
Confidence 8876 6899999999999999999999999999988888887632221111 25
Q ss_pred CCHHHHHHHHHHhccCCCCCCC----HHHHhcCCCCCC
Q psy6391 269 LDQDGLDLLEKTLIYCPATRIN----AENALKHKYFAD 302 (313)
Q Consensus 269 ~~~~l~~li~~~l~~dp~~Rps----~~e~l~h~~~~~ 302 (313)
++..+.+||+++|.+||++|.. |.||.+||||++
T Consensus 360 vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~g 397 (459)
T KOG0610|consen 360 VSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEG 397 (459)
T ss_pred chhHHHHHHHHHhccChhhhhccccchHHhhcCccccC
Confidence 7899999999999999999998 999999999998
No 82
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.8e-45 Score=317.70 Aligned_cols=249 Identities=27% Similarity=0.440 Sum_probs=207.1
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcEEEEEEecccc
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKEL-NHPNIVQLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (313)
+.||+|++|.||++.++.+++.||+|++..... .......+..|..++..+ +||+|+++++++...+.+++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 468999999999999999999999999875431 222335667788888876 799999999999999999999999986
Q ss_pred -CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccc
Q psy6391 98 -DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHE 176 (313)
Q Consensus 98 -~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~ 176 (313)
+|...+.. ...+++..++.++.||+.||.|||+.|++|+||||+|||++.++. ++|+|||++.............
T Consensus 81 g~L~~~i~~---~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~-~kL~DfG~~~~~~~~~~~~~~~ 156 (320)
T cd05590 81 GDLMFHIQK---SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGH-CKLADFGMCKEGIFNGKTTSTF 156 (320)
T ss_pred chHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCc-EEEeeCCCCeecCcCCCccccc
Confidence 77666654 345899999999999999999999999999999999999998877 9999999987543333333445
Q ss_pred cccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCC
Q psy6391 177 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE 256 (313)
Q Consensus 177 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (313)
.|+..|+|||.+.+. .++.++|+||+|+++|+|++|+.||...+.......+...... .+
T Consensus 157 ~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~------------------~~- 216 (320)
T cd05590 157 CGTPDYIAPEILQEM-LYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVV------------------YP- 216 (320)
T ss_pred ccCccccCHHHHcCC-CCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCC------------------CC-
Confidence 789999999998654 4789999999999999999999999988877766665432110 01
Q ss_pred CchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCH------HHHhcCCCCCC
Q psy6391 257 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINA------ENALKHKYFAD 302 (313)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~------~e~l~h~~~~~ 302 (313)
..++.++.++|.+||+.||.+||++ .++++||||+.
T Consensus 217 ----------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~ 258 (320)
T cd05590 217 ----------TWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKE 258 (320)
T ss_pred ----------CCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCC
Confidence 1367999999999999999999998 99999999986
No 83
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.9e-45 Score=323.18 Aligned_cols=261 Identities=28% Similarity=0.449 Sum_probs=207.9
Q ss_pred hhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEE
Q psy6391 9 VKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRL 88 (313)
Q Consensus 9 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 88 (313)
....+++|+.++.||+|++|.||++.+..+++.|++|++..... ......+.+|+.+++.++|+||+++++++.+++.+
T Consensus 69 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 147 (353)
T PLN00034 69 AAKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE-DTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEI 147 (353)
T ss_pred CCCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc-HHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeE
Confidence 44457899999999999999999999998999999999865432 22235788999999999999999999999999999
Q ss_pred EEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 89 YLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 89 ~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
++||||+.+ +|.. ....++..+..++.||+.||.|||++|++|+||||+|||++.++. ++|+|||++....
T Consensus 148 ~lv~e~~~~~~L~~-------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~-~kL~DfG~~~~~~ 219 (353)
T PLN00034 148 QVLLEFMDGGSLEG-------THIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKN-VKIADFGVSRILA 219 (353)
T ss_pred EEEEecCCCCcccc-------cccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCC-EEEcccccceecc
Confidence 999999987 4322 123567888999999999999999999999999999999998877 9999999997765
Q ss_pred CCCcccccccccccccchhhhcC----CCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCC
Q psy6391 168 VPVRIYTHEVVTLWYRAPEVLLG----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 168 ~~~~~~~~~~~~~~~~~PE~~~~----~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
..........|+..|+|||.+.. ....+.++||||||+++|+|++|+.||......+...............
T Consensus 220 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---- 295 (353)
T PLN00034 220 QTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPE---- 295 (353)
T ss_pred cccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCC----
Confidence 43333344578999999998743 2234678999999999999999999998443322221111110000000
Q ss_pred CCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 244 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
....++.++.+||.+||+.||++||++.|+|+||||.+.
T Consensus 296 ---------------------~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~ 334 (353)
T PLN00034 296 ---------------------APATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRA 334 (353)
T ss_pred ---------------------CCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence 002478999999999999999999999999999999996
No 84
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=5.2e-45 Score=316.76 Aligned_cols=254 Identities=26% Similarity=0.421 Sum_probs=210.4
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcCC-CCceeeceeEEeCcEEEEEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELNH-PNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~ 92 (313)
+|++++.||+|++|.||+|.+..+++.||+|++..... .......+..|..++..++| ++|+.+++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 58999999999999999999998999999999976432 22223567788999999865 56888999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
||+++ +|.+.+.. ...+++..++.++.||+.||.|||++|++|+||||+|||++.++. ++|+|||++........
T Consensus 81 E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~-~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05587 81 EYVNGGDLMYHIQQ---VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGH-IKIADFGMCKENIFGGK 156 (324)
T ss_pred cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCC-EEEeecCcceecCCCCC
Confidence 99975 77777654 335889999999999999999999999999999999999998877 99999999865432223
Q ss_pred ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcc
Q psy6391 172 IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK 251 (313)
Q Consensus 172 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (313)
......|+..|+|||++.+.. ++.++|+||+|+++|+|++|+.||...+.......+......
T Consensus 157 ~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~---------------- 219 (324)
T cd05587 157 TTRTFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS---------------- 219 (324)
T ss_pred ceeeecCCccccChhhhcCCC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC----------------
Confidence 333456899999999987644 789999999999999999999999988777666665432110
Q ss_pred ccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCH-----HHHhcCCCCCC
Q psy6391 252 TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINA-----ENALKHKYFAD 302 (313)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~e~l~h~~~~~ 302 (313)
++ ..++.++.+++.+||+.||.+|++. .++++||||+.
T Consensus 220 --~~-----------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~ 262 (324)
T cd05587 220 --YP-----------KSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRR 262 (324)
T ss_pred --CC-----------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 01 2478999999999999999999976 89999999986
No 85
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.6e-44 Score=311.98 Aligned_cols=285 Identities=45% Similarity=0.805 Sum_probs=230.9
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC-------
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN------- 85 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 85 (313)
+++|++.+.||.|++|.||+|.++.+++.+++|.+............+.+|+++++.++|+||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 7899999999999999999999998999999999876554444445678999999999999999999987543
Q ss_pred -cEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcc
Q psy6391 86 -YRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLAR 164 (313)
Q Consensus 86 -~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~ 164 (313)
...++|++|+.+++...+.. ....+++.+++.++.||+.+|.|||++|++|+||+|+||+++.++. ++|+|||++.
T Consensus 87 ~~~~~lv~~~~~~~l~~~~~~--~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~-~~l~dfg~~~ 163 (311)
T cd07866 87 RGSVYMVTPYMDHDLSGLLEN--PSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGI-LKIADFGLAR 163 (311)
T ss_pred CceEEEEEecCCcCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC-EEECcCccch
Confidence 35799999999988777664 3345899999999999999999999999999999999999999877 9999999987
Q ss_pred ccCCCCc-----------ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc
Q psy6391 165 AFGVPVR-----------IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVL 233 (313)
Q Consensus 165 ~~~~~~~-----------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~ 233 (313)
....... ......++..|+|||.+.+...++.++|+||+|+++|+|++|+.||...........+....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~ 243 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLC 243 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 6532211 11123457789999988765567899999999999999999999999888888888888777
Q ss_pred CCCCCCCCCCCCCCCCccc-cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 234 TTPTEDNWPGVSKLPDYKT-TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
..+.+..++....++.... ................+++.+.+||.+||+.||.+|||+.++++||||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred CCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 7777666666554444321 111111222333445677899999999999999999999999999998
No 86
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=5.4e-45 Score=323.29 Aligned_cols=259 Identities=26% Similarity=0.396 Sum_probs=208.1
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccC-CCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEN-DDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
+.|++++.||+|+||+||+|.+..+++.||+|++.... ........+.+|+.+++.++|++|+++++++.+.+.+++||
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence 36899999999999999999999999999999997543 22223456888999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCC-
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV- 170 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~- 170 (313)
||++| +|.+++.. ...+++..++.++.||+.||.|||+.|++|+||||+|||++.++. ++|+|||++.......
T Consensus 81 E~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~-~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 81 DYIPGGDMMSLLIR---MEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGH-IKLTDFGLCTGFRWTHN 156 (381)
T ss_pred ecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCC-EEEeeCcCCcccccccc
Confidence 99975 77777764 345899999999999999999999999999999999999998876 9999999875321000
Q ss_pred ----------------------------------------------cccccccccccccchhhhcCCCCCCcchhHhHHH
Q psy6391 171 ----------------------------------------------RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIG 204 (313)
Q Consensus 171 ----------------------------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG 204 (313)
......+||..|+|||.+.+.. ++.++||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~DiwSlG 235 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKG-YTQLCDWWSVG 235 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCC-CCCccceeehh
Confidence 0012246899999999987644 78999999999
Q ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHh--c
Q psy6391 205 CIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTL--I 282 (313)
Q Consensus 205 ~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l--~ 282 (313)
|++|+|++|..||...+.......+........ ++. ...+++++.+||.+|+ .
T Consensus 236 ~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~----------------~~~---------~~~~s~~~~dli~~ll~~~ 290 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPTETQLKVINWENTLH----------------IPP---------QVKLSPEAVDLITKLCCSA 290 (381)
T ss_pred hHHHHHHhCCCCCcCCCHHHHHHHHHccccccC----------------CCC---------CCCCCHHHHHHHHHHccCc
Confidence 999999999999998776555444432111100 000 0247899999999955 4
Q ss_pred cCCCCCCCHHHHhcCCCCCC
Q psy6391 283 YCPATRINAENALKHKYFAD 302 (313)
Q Consensus 283 ~dp~~Rps~~e~l~h~~~~~ 302 (313)
.+|..||++.++++||||++
T Consensus 291 ~~~~~R~~~~~~l~hp~f~~ 310 (381)
T cd05626 291 EERLGRNGADDIKAHPFFSE 310 (381)
T ss_pred ccccCCCCHHHHhcCcccCC
Confidence 55566999999999999986
No 87
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2.2e-45 Score=319.97 Aligned_cols=260 Identities=27% Similarity=0.384 Sum_probs=215.3
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
++|++.+.||+|++|.||++.+..+++.||+|+++.... .......+.+|+.+++.++|++|+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 479999999999999999999999999999999986542 2223456778999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
||+++ +|.+++... ...+++..++.++.||+.||.|||+.|++|+||||+||+++.++. ++|+|||++........
T Consensus 81 e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~-~kL~Dfg~a~~~~~~~~ 157 (330)
T cd05601 81 EYQPGGDLLSLLNRY--EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGH-IKLADFGSAARLTANKM 157 (330)
T ss_pred CCCCCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCC-EEeccCCCCeECCCCCc
Confidence 99975 888887763 245899999999999999999999999999999999999998877 99999999976543322
Q ss_pred -ccccccccccccchhhhcC-----CCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCC
Q psy6391 172 -IYTHEVVTLWYRAPEVLLG-----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 245 (313)
Q Consensus 172 -~~~~~~~~~~~~~PE~~~~-----~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
......|+..|+|||.+.. ...++.++||||||+++|+|++|..||...........+........
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~-------- 229 (330)
T cd05601 158 VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLK-------- 229 (330)
T ss_pred eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccC--------
Confidence 1223467899999999863 33468899999999999999999999998877666665544211000
Q ss_pred CCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 246 KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
++. .+.+++++.+||.+||. +|.+||++.++++||||++
T Consensus 230 --------~~~---------~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~ 268 (330)
T cd05601 230 --------FPE---------DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSK 268 (330)
T ss_pred --------CCC---------CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCC
Confidence 000 12478999999999998 9999999999999999986
No 88
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=5.7e-45 Score=321.28 Aligned_cols=266 Identities=25% Similarity=0.366 Sum_probs=216.5
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELNHPNIVQLHDTMIENY 86 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 86 (313)
+.....++|++.+.||+|++|.||++.+..+++.+|+|++..... .......+.+|+.+++.++||||+++++.+.+++
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK 116 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence 344556899999999999999999999999999999999875332 2222355778999999999999999999999999
Q ss_pred EEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 87 RLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 87 ~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
..++||||+++ +|.+++... .+++..+..++.||+.||.|||++|++|+||||+|||++.++. ++|+|||++..
T Consensus 117 ~~~lv~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~-~kL~DFG~a~~ 191 (370)
T cd05621 117 YLYMVMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGH-LKLADFGTCMK 191 (370)
T ss_pred EEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCC-EEEEeccccee
Confidence 99999999975 888877542 3789999999999999999999999999999999999998877 99999999976
Q ss_pred cCCCCc-ccccccccccccchhhhcCCC---CCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCC
Q psy6391 166 FGVPVR-IYTHEVVTLWYRAPEVLLGSQ---RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNW 241 (313)
Q Consensus 166 ~~~~~~-~~~~~~~~~~~~~PE~~~~~~---~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
...... ......||..|+|||++.... .++.++|+||+|+++|+|++|..||...........+........ +
T Consensus 192 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~---~ 268 (370)
T cd05621 192 MDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLN---F 268 (370)
T ss_pred cccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccC---C
Confidence 543221 223456899999999986432 367899999999999999999999998877766666654221111 0
Q ss_pred CCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCC--CCCHHHHhcCCCCCCC
Q psy6391 242 PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPAT--RINAENALKHKYFADK 303 (313)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~--Rps~~e~l~h~~~~~~ 303 (313)
+. ...++..+.+++..||..++.+ |+++.++++||||+..
T Consensus 269 -------------p~---------~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 269 -------------PE---------DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred -------------CC---------cccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 00 0247899999999999866654 8999999999999873
No 89
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.2e-45 Score=324.40 Aligned_cols=258 Identities=27% Similarity=0.424 Sum_probs=209.6
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
++|++++.||+|++|.||++.+..+++.||+|++..... .......+.+|+.+++.++|++|+++++.+.+++.+++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 479999999999999999999999999999999865432 2223466788999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC--
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP-- 169 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~-- 169 (313)
||+++ +|.+++.. .+.+++..++.++.||+.||+|||++|++|+||||+|||++.++. ++|+|||++......
T Consensus 81 E~~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~-ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 81 DYIPGGDMMSLLIR---LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLCTGFRWTHD 156 (376)
T ss_pred eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCC-EEEEeCCCCcccccccc
Confidence 99975 78787764 345899999999999999999999999999999999999998877 999999987432100
Q ss_pred -----------------------------------------CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHH
Q psy6391 170 -----------------------------------------VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 208 (313)
Q Consensus 170 -----------------------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~ 208 (313)
.......+|+..|+|||++.+.. ++.++|||||||++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvily 235 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILY 235 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCC-CCcceeeeeccceee
Confidence 00011246899999999987644 789999999999999
Q ss_pred HHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCC
Q psy6391 209 EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATR 288 (313)
Q Consensus 209 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 288 (313)
+|++|+.||...........+........ ++. ...+++++.++|.+|+ .+|.+|
T Consensus 236 ell~G~~Pf~~~~~~~~~~~i~~~~~~~~----------------~~~---------~~~~s~~~~~li~~l~-~~p~~R 289 (376)
T cd05598 236 EMLVGQPPFLADTPAETQLKVINWETTLH----------------IPS---------QAKLSREASDLILRLC-CGAEDR 289 (376)
T ss_pred ehhhCCCCCCCCCHHHHHHHHhccCcccc----------------CCC---------CCCCCHHHHHHHHHHh-cCHhhc
Confidence 99999999998877655544432111000 000 1247899999999977 599999
Q ss_pred C---CHHHHhcCCCCCC
Q psy6391 289 I---NAENALKHKYFAD 302 (313)
Q Consensus 289 p---s~~e~l~h~~~~~ 302 (313)
+ ++.++++||||++
T Consensus 290 ~~~~t~~ell~h~~~~~ 306 (376)
T cd05598 290 LGKNGADEIKAHPFFKG 306 (376)
T ss_pred CCCCCHHHHhCCCCcCC
Confidence 9 9999999999987
No 90
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=5.7e-45 Score=316.11 Aligned_cols=249 Identities=26% Similarity=0.409 Sum_probs=207.6
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcEEEEEEecccc
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKEL-NHPNIVQLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (313)
+.||+|++|.||+|.+..+++.||+|++..... .......+..|..+++.+ +||+|+++++++.+++.+++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 468999999999999998999999999976432 222235567788888876 799999999999999999999999986
Q ss_pred -CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccc
Q psy6391 98 -DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHE 176 (313)
Q Consensus 98 -~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~ 176 (313)
+|...+.. ...+++..++.++.||+.||.|||+.|++|+||||+||+++.++. ++|+|||++.............
T Consensus 81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~-~kL~Dfg~~~~~~~~~~~~~~~ 156 (321)
T cd05591 81 GDLMFQIQR---SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGH-CKLADFGMCKEGILNGVTTTTF 156 (321)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCC-EEEeecccceecccCCcccccc
Confidence 77766654 345899999999999999999999999999999999999999877 9999999987543333333445
Q ss_pred cccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCC
Q psy6391 177 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE 256 (313)
Q Consensus 177 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (313)
.|+..|+|||.+.+. .++.++|+||+|+++|+|++|+.||...+.......+....... +
T Consensus 157 ~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~------------------p- 216 (321)
T cd05591 157 CGTPDYIAPEILQEL-EYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLY------------------P- 216 (321)
T ss_pred ccCccccCHHHHcCC-CCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC------------------C-
Confidence 689999999998754 47899999999999999999999999888877776665421110 0
Q ss_pred CchhhhhhhccCCCHHHHHHHHHHhccCCCCCC-------CHHHHhcCCCCCC
Q psy6391 257 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI-------NAENALKHKYFAD 302 (313)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-------s~~e~l~h~~~~~ 302 (313)
..++.++.++|.+||+.||++|| ++.++++||||..
T Consensus 217 ----------~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~ 259 (321)
T cd05591 217 ----------VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE 259 (321)
T ss_pred ----------CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence 13679999999999999999999 9999999999976
No 91
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=9.9e-45 Score=308.74 Aligned_cols=255 Identities=25% Similarity=0.348 Sum_probs=204.3
Q ss_pred eccccceEEEEEEeCcCCcEEEEEEecccCCCC-CCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc-CH
Q psy6391 22 IGEGTYGVVYKAKNKVTGALVAIKKIRMENDDE-GIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM-DL 99 (313)
Q Consensus 22 lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~-~l 99 (313)
||+|+||+||++.+..+++.+++|.+....... .....+..|+.+++.++|++|+++.+.+..+...++||||+++ +|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999999999999999987543221 1224567899999999999999999999999999999999975 77
Q ss_pred HHHHhhC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccccc
Q psy6391 100 KKYIDTV-PKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHEVV 178 (313)
Q Consensus 100 ~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~ 178 (313)
...+... .....+++..++.++.||+.||.|||+.|++|+||+|+||+++.++. ++|+|||.+..............|
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~-~~l~dfg~~~~~~~~~~~~~~~~g 159 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGN-VRISDLGLAVELKDGQSKTKGYAG 159 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC-EEEeeCccceecCCCCccccccCC
Confidence 6665432 23456899999999999999999999999999999999999998877 999999998766444333344567
Q ss_pred cccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCc
Q psy6391 179 TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS 258 (313)
Q Consensus 179 ~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (313)
+..|+|||.+.+. .++.++|+||+|+++|+|++|+.||..................... . +
T Consensus 160 ~~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~-------------~---- 220 (280)
T cd05608 160 TPGFMAPELLQGE-EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSV-T-------------Y---- 220 (280)
T ss_pred CcCccCHHHhcCC-CCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCC-C-------------C----
Confidence 8899999998764 4789999999999999999999999865432222222211110000 0 0
Q ss_pred hhhhhhhccCCCHHHHHHHHHHhccCCCCCC-----CHHHHhcCCCCCCC
Q psy6391 259 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK 303 (313)
Q Consensus 259 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~e~l~h~~~~~~ 303 (313)
...++.++.+++.+||+.||++|| +++++++||||++.
T Consensus 221 -------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 221 -------PDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDL 263 (280)
T ss_pred -------cccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence 024789999999999999999999 88999999999883
No 92
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=5.5e-44 Score=308.46 Aligned_cols=292 Identities=40% Similarity=0.726 Sum_probs=226.1
Q ss_pred CchhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC
Q psy6391 6 TDDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN 85 (313)
Q Consensus 6 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 85 (313)
...+...+++|++.+.||+|++|.||++.+..+++.|++|.+............+.+|+.++++++||+|+++++++...
T Consensus 4 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 83 (310)
T cd07865 4 EFPFCDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTK 83 (310)
T ss_pred cCcccchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecc
Confidence 44567788999999999999999999999999999999999876554444445667899999999999999999998754
Q ss_pred c--------EEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEE
Q psy6391 86 Y--------RLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKV 157 (313)
Q Consensus 86 ~--------~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l 157 (313)
+ ..++|+||+++++.+.+... ...+++..++.++.||+.||.|||+.|++|+||+|+||+++.++. ++|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~l~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~-~kl 160 (310)
T cd07865 84 ATPYNRYKGSFYLVFEFCEHDLAGLLSNK--NVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGI-LKL 160 (310)
T ss_pred cccccCCCceEEEEEcCCCcCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCc-EEE
Confidence 3 46999999999888887653 335899999999999999999999999999999999999998876 999
Q ss_pred ecCCCccccCCCCc----ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc
Q psy6391 158 ADFGLARAFGVPVR----IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVL 233 (313)
Q Consensus 158 ~df~~~~~~~~~~~----~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~ 233 (313)
+|||.+........ ......++..|+|||.+.+....+.++|+||+|+++|+|++|..||...+.......+....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~ 240 (310)
T cd07865 161 ADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLC 240 (310)
T ss_pred CcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 99999876533221 11233567789999988765557889999999999999999999999887766666666555
Q ss_pred CCCCCCCCCCCCCCCCccc-cCCCCchhhhhhhc--cCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 234 TTPTEDNWPGVSKLPDYKT-TFPEWSNFCLDKHV--KNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
+..+...++.......+.. .++..........+ ...+..+.+||.+||+.||.+|||++++|+||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 241 GSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred CCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 5544444444322211110 01111111111111 1246788899999999999999999999999998
No 93
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=8.1e-45 Score=322.45 Aligned_cols=259 Identities=26% Similarity=0.406 Sum_probs=209.5
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
++|++++.||+|++|.||+|.+..+++.||+|++..... .......+.+|+.+++.++|++|+++++.+.+++..++||
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence 368999999999999999999999999999999875432 2222356788999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC--
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP-- 169 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~-- 169 (313)
||+++ +|.+.+.. .+.+++..++.++.||+.||.|||++||+|+||||+|||++.++. ++|+|||++......
T Consensus 81 E~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~-~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 81 DYIPGGDMMSLLIR---MGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLCTGFRWTHD 156 (382)
T ss_pred eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC-EEEeECCCCcccccccc
Confidence 99975 77777764 245899999999999999999999999999999999999998877 999999987432100
Q ss_pred ---------------------------------------------CcccccccccccccchhhhcCCCCCCcchhHhHHH
Q psy6391 170 ---------------------------------------------VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIG 204 (313)
Q Consensus 170 ---------------------------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG 204 (313)
.......+||..|+|||++.+.. ++.++||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~DiwSlG 235 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVG 235 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCC-CCCeeeEEech
Confidence 00011236889999999987654 78999999999
Q ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccC
Q psy6391 205 CIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 284 (313)
Q Consensus 205 ~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 284 (313)
|++|+|++|+.||...+.......+.........+. ...+++++.++|.+|+ .+
T Consensus 236 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~-------------------------~~~~s~~~~~li~~l~-~~ 289 (382)
T cd05625 236 VILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPP-------------------------QAKLSPEASDLIIKLC-RG 289 (382)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCC-------------------------cccCCHHHHHHHHHHc-cC
Confidence 999999999999998776655555443111111000 0247899999999986 59
Q ss_pred CCCCCC---HHHHhcCCCCCCC
Q psy6391 285 PATRIN---AENALKHKYFADK 303 (313)
Q Consensus 285 p~~Rps---~~e~l~h~~~~~~ 303 (313)
|.+|++ +.++++||||++.
T Consensus 290 p~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 290 PEDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred HhHcCCCCCHHHHhcCCCcCCc
Confidence 999997 9999999999873
No 94
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.9e-45 Score=318.50 Aligned_cols=250 Identities=27% Similarity=0.411 Sum_probs=206.0
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc-
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM- 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~- 97 (313)
+.||+|+||.||++.+..+++.||+|++..... .......+.+|+.+++.++||||+++++.+..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 468999999999999999999999999976432 122235667899999999999999999999999999999999986
Q ss_pred CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccc
Q psy6391 98 DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHK-RRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHE 176 (313)
Q Consensus 98 ~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~-~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~ 176 (313)
+|...+.. ...+++..++.++.||+.||.|||+ .|++|+||||+|||++.++. ++|+|||++.............
T Consensus 81 ~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~-~kL~Dfg~~~~~~~~~~~~~~~ 156 (325)
T cd05594 81 ELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTF 156 (325)
T ss_pred cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCC-EEEecCCCCeecCCCCcccccc
Confidence 66666553 3458999999999999999999997 79999999999999998877 9999999986543222222345
Q ss_pred cccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCC
Q psy6391 177 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE 256 (313)
Q Consensus 177 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (313)
.|+..|+|||++.+. .++.++||||||+++|+|++|..||...+.......+...... ++
T Consensus 157 ~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~------------------~p- 216 (325)
T cd05594 157 CGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR------------------FP- 216 (325)
T ss_pred cCCcccCCHHHHccC-CCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCC------------------CC-
Confidence 689999999998764 4789999999999999999999999887766555544321100 01
Q ss_pred CchhhhhhhccCCCHHHHHHHHHHhccCCCCCC-----CHHHHhcCCCCCCC
Q psy6391 257 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK 303 (313)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~e~l~h~~~~~~ 303 (313)
..+++++.+||.+||+.||.+|+ ++.++++||||++.
T Consensus 217 ----------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 217 ----------RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred ----------CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 24789999999999999999997 99999999999874
No 95
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=7.6e-44 Score=305.01 Aligned_cols=284 Identities=45% Similarity=0.771 Sum_probs=220.6
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
.++|.+.+.||+|++|.||.|.+..++..+++|++..... ......+.+|+.+++.++|+||+++++++.+++..++|+
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE-EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc-CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4789999999999999999999998899999999875532 223356788999999999999999999999999999999
Q ss_pred eccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 93 EFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 93 e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
||+++++.+.+... ...+++..+..++.||+.||.|||+.|++|+||+|+||+++.++. ++|+|||.+.........
T Consensus 83 e~~~~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~-~~l~Dfg~~~~~~~~~~~ 159 (291)
T cd07870 83 EYMHTDLAQYMIQH--PGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGE-LKLADFGLARAKSIPSQT 159 (291)
T ss_pred ecccCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCc-EEEeccccccccCCCCCC
Confidence 99998887776542 345788899999999999999999999999999999999998877 999999998765443333
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCCCCCCCCCCCCCCcc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE-IDQLFRIFRVLTTPTEDNWPGVSKLPDYK 251 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (313)
.....++..|+|||.+.+....+.++|+||+|+++|++++|..||..... .+...........+....++....++.+.
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (291)
T cd07870 160 YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYK 239 (291)
T ss_pred CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhccccc
Confidence 34445688899999886655578899999999999999999999986543 34445555545555444444433333222
Q ss_pred ccCCCCc-hhhhhhhc--cCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 252 TTFPEWS-NFCLDKHV--KNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 252 ~~~~~~~-~~~~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
....... ........ ...+.++.+++.+|+..||++|||+.+++.||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 240 PEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred chhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 1111100 00011111 1236789999999999999999999999999998
No 96
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=6.6e-45 Score=315.90 Aligned_cols=251 Identities=28% Similarity=0.461 Sum_probs=207.0
Q ss_pred eeeeccccceEEEEEEeC---cCCcEEEEEEecccCC--CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 19 VEKIGEGTYGVVYKAKNK---VTGALVAIKKIRMEND--DEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 19 ~~~lg~g~~~~v~~~~~~---~~~~~~~~K~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
++.||+|+||.||++... .+++.||+|+++.... .......+.+|+.+++.++||||+++++.+..++..++|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 368999999999999863 4688999999875431 22223567789999999999999999999999999999999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
|+.+ +|.+.+.. .+.+++..++.++.||+.||.|||+.|++|+||||+|||++.++. ++|+|||++.........
T Consensus 81 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~-~kl~Dfg~~~~~~~~~~~ 156 (323)
T cd05584 81 YLSGGELFMHLER---EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGH-VKLTDFGLCKESIHEGTV 156 (323)
T ss_pred CCCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCC-EEEeeCcCCeecccCCCc
Confidence 9986 77776654 345889999999999999999999999999999999999998877 999999998754333333
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
.....|+..|+|||.+.+.. .+.++||||||+++|+|++|+.||...+.......+......
T Consensus 157 ~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~----------------- 218 (323)
T cd05584 157 THTFCGTIEYMAPEILMRSG-HGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLN----------------- 218 (323)
T ss_pred ccccCCCccccChhhccCCC-CCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC-----------------
Confidence 33456899999999987644 789999999999999999999999988776666555432110
Q ss_pred cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCC-----CHHHHhcCCCCCCC
Q psy6391 253 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK 303 (313)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~e~l~h~~~~~~ 303 (313)
++ +.+++++.+||.+||+.||++|| ++.++++||||...
T Consensus 219 -~~-----------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 219 -LP-----------PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred -CC-----------CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 00 24679999999999999999999 89999999999763
No 97
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=8.1e-45 Score=321.89 Aligned_cols=258 Identities=29% Similarity=0.423 Sum_probs=208.3
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
++|.+++.||+|++|.||++.+..+++.||+|++..... .......+.+|+.+++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 479999999999999999999999999999999865431 2222356788999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCC-
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV- 170 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~- 170 (313)
||++| +|.+.+.. .+.+++..++.++.|++.||.|||+.|++|+||||+|||++.++. ++|+|||++.......
T Consensus 81 E~~~gg~L~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~-~kl~DfGla~~~~~~~~ 156 (377)
T cd05629 81 EFLPGGDLMTMLIK---YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGH-IKLSDFGLSTGFHKQHD 156 (377)
T ss_pred eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCC-EEEeecccccccccccc
Confidence 99975 88777764 345899999999999999999999999999999999999998877 9999999885321100
Q ss_pred ------------c----------------------------------ccccccccccccchhhhcCCCCCCcchhHhHHH
Q psy6391 171 ------------R----------------------------------IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIG 204 (313)
Q Consensus 171 ------------~----------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG 204 (313)
. ......||..|+|||++.+. .++.++||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG 235 (377)
T cd05629 157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ-GYGQECDWWSLG 235 (377)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccC-CCCCceeeEecc
Confidence 0 00123589999999998764 479999999999
Q ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccC
Q psy6391 205 CIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 284 (313)
Q Consensus 205 ~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 284 (313)
|++|+|++|..||...........+........ ++. ...++.++.+||.+||. +
T Consensus 236 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~----------------~p~---------~~~~s~~~~dli~~lL~-~ 289 (377)
T cd05629 236 AIMFECLIGWPPFCSENSHETYRKIINWRETLY----------------FPD---------DIHLSVEAEDLIRRLIT-N 289 (377)
T ss_pred hhhhhhhcCCCCCCCCCHHHHHHHHHccCCccC----------------CCC---------CCCCCHHHHHHHHHHhc-C
Confidence 999999999999988777666555543111000 000 02478999999999998 6
Q ss_pred CCCC---CCHHHHhcCCCCCC
Q psy6391 285 PATR---INAENALKHKYFAD 302 (313)
Q Consensus 285 p~~R---ps~~e~l~h~~~~~ 302 (313)
|.+| +++.++++||||++
T Consensus 290 ~~~r~~r~~~~~~l~hp~~~~ 310 (377)
T cd05629 290 AENRLGRGGAHEIKSHPFFRG 310 (377)
T ss_pred HhhcCCCCCHHHHhcCCCcCC
Confidence 6665 69999999999986
No 98
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=9.4e-45 Score=316.28 Aligned_cols=257 Identities=26% Similarity=0.400 Sum_probs=205.9
Q ss_pred cceeeeeeccccceEEEEEEeC---cCCcEEEEEEecccCC--CCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNK---VTGALVAIKKIRMEND--DEGIPATAIREISVLKEL-NHPNIVQLHDTMIENYRL 88 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~---~~~~~~~~K~~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~ 88 (313)
+|++.+.||+|++|.||+++.. .+++.||+|++..... .......+..|+.+++.+ +|++|+.+++++..++.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 5899999999999999998863 4688999999875432 222335677899999999 599999999999999999
Q ss_pred EEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 89 YLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 89 ~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
++||||+.+ +|.+.+.. ...+++..++.++.||+.||.|||++|++|+||||+|||++.++. ++|+|||++....
T Consensus 81 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~-~kl~DfG~~~~~~ 156 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ---RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGH-VVLTDFGLSKEFL 156 (332)
T ss_pred EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCC-EEEeeCcCCcccc
Confidence 999999986 77777654 345899999999999999999999999999999999999998877 9999999987643
Q ss_pred CCC-cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHhcCCCCCCCCCC
Q psy6391 168 VPV-RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE---IDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 168 ~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~ 243 (313)
... .......|+..|+|||.+.+....+.++||||||+++|+|++|+.||..... .............+.
T Consensus 157 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~------ 230 (332)
T cd05614 157 SEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPF------ 230 (332)
T ss_pred ccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCC------
Confidence 221 1222346899999999987655578899999999999999999999974322 122211111111100
Q ss_pred CCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCC-----CHHHHhcCCCCCCC
Q psy6391 244 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK 303 (313)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~e~l~h~~~~~~ 303 (313)
+ ..+++.+.+++.+||+.||++|| +++++++||||++.
T Consensus 231 -----------~-----------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 231 -----------P-----------SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred -----------C-----------CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 0 24789999999999999999999 88999999999873
No 99
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.8e-45 Score=309.68 Aligned_cols=259 Identities=36% Similarity=0.593 Sum_probs=211.0
Q ss_pred ceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecc
Q psy6391 16 YEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFM 95 (313)
Q Consensus 16 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 95 (313)
|++.+.||+|++|+||++.+..+++.+|+|++...............|+.++++++|++|+++++++.+....+++||++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 78999999999999999999999999999999876544332234456999999999999999999999999999999999
Q ss_pred cc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccc
Q psy6391 96 SM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYT 174 (313)
Q Consensus 96 ~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~ 174 (313)
.+ +|.+++.. ...++...++.++.||+.+|.+||+.|++|+||+|+||+++.++. ++|+|||.+...........
T Consensus 81 ~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~-~~l~Dfg~~~~~~~~~~~~~ 156 (260)
T PF00069_consen 81 PGGSLQDYLQK---NKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGE-VKLIDFGSSVKLSENNENFN 156 (260)
T ss_dssp TTEBHHHHHHH---HSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSE-EEESSGTTTEESTSTTSEBS
T ss_pred ccccccccccc---ccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccc
Confidence 98 89888873 345899999999999999999999999999999999999997766 99999999976433334445
Q ss_pred cccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccC
Q psy6391 175 HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTF 254 (313)
Q Consensus 175 ~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (313)
...++..|+|||.+......+.++|+||||+++++|++|..||........................
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~------------- 223 (260)
T PF00069_consen 157 PFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSS------------- 223 (260)
T ss_dssp SSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHT-------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccc-------------
Confidence 5678999999999873456899999999999999999999999987433333333221111000000
Q ss_pred CCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 255 PEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
......+.++.++|.+||+.||++||++.++++||||
T Consensus 224 ---------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 224 ---------QQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp ---------TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred ---------cccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 0001124899999999999999999999999999997
No 100
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2e-44 Score=312.94 Aligned_cols=254 Identities=24% Similarity=0.376 Sum_probs=210.7
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcEEEEEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKEL-NHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
+|.+.+.||+|++|.||++.+..+++.||+|++...... ......+..|..++..+ +|++++.+++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 589999999999999999999989999999998765321 22224566778888777 5899999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
||+++ +|...+.. ...+++..+..++.||+.||.|||+.|++|+||||+|||++.++. ++|+|||++........
T Consensus 81 E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~-~kL~DfG~~~~~~~~~~ 156 (323)
T cd05616 81 EYVNGGDLMYQIQQ---VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGH-IKIADFGMCKENMWDGV 156 (323)
T ss_pred cCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCc-EEEccCCCceecCCCCC
Confidence 99975 77777654 335899999999999999999999999999999999999999877 99999999875433222
Q ss_pred ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcc
Q psy6391 172 IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK 251 (313)
Q Consensus 172 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (313)
......|+..|+|||.+... .++.++|+||+|+++|+|++|+.||...+.......+.......
T Consensus 157 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~--------------- 220 (323)
T cd05616 157 TTKTFCGTPDYIAPEIIAYQ-PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY--------------- 220 (323)
T ss_pred ccccCCCChhhcCHHHhcCC-CCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC---------------
Confidence 33445689999999998764 48999999999999999999999999888777666665421110
Q ss_pred ccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC-----HHHHhcCCCCCC
Q psy6391 252 TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN-----AENALKHKYFAD 302 (313)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~e~l~h~~~~~ 302 (313)
+ ..++.++.+++.+||+.||++|++ ..++++||||+.
T Consensus 221 ---p-----------~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~ 262 (323)
T cd05616 221 ---P-----------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 262 (323)
T ss_pred ---C-----------CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCC
Confidence 0 147899999999999999999997 489999999986
No 101
>KOG0666|consensus
Probab=100.00 E-value=2.5e-45 Score=295.91 Aligned_cols=293 Identities=46% Similarity=0.794 Sum_probs=245.9
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCC----cEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEe-C
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTG----ALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIE-N 85 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~----~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~ 85 (313)
..+..|++++.||+|.+|.||++..+.++ +.+|+|.++..+.........-+|+..++.++|||++.+..++.. +
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d 100 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHD 100 (438)
T ss_pred HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccC
Confidence 45678999999999999999999654443 378999998877666677888899999999999999999999987 7
Q ss_pred cEEEEEEeccccCHHHHHhhCC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCC---CeEEEecC
Q psy6391 86 YRLYLIFEFMSMDLKKYIDTVP--KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKS---NIVKVADF 160 (313)
Q Consensus 86 ~~~~lv~e~~~~~l~~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~---~~~~l~df 160 (313)
..+++++||.+.+|..++.... ....++...++.+++||+.+++|||++=+.|+||||.|||+..++ +.+||+||
T Consensus 101 ~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 101 KKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred ceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 8999999999999999987643 345689999999999999999999999999999999999998772 34999999
Q ss_pred CCccccCCCCccc---ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCC---------ChHHHHHH
Q psy6391 161 GLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGD---------SEIDQLFR 228 (313)
Q Consensus 161 ~~~~~~~~~~~~~---~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~---------~~~~~~~~ 228 (313)
|++.....+-... ...+-|.+|.|||++.+...++.+.|+||+||++.||++.++.|... -..++..+
T Consensus 181 GlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~r 260 (438)
T KOG0666|consen 181 GLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDR 260 (438)
T ss_pred cHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHH
Confidence 9998876654433 23456999999999999999999999999999999999999888642 33578899
Q ss_pred HHHhcCCCCCCCCCCCCCCCCccccCCCCchhh-----hh---hhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 229 IFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC-----LD---KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
++...+.|....|+++.++++.......+.... +. .....-++...+|+.+||+.||.+|.|++++|+|+||
T Consensus 261 If~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF 340 (438)
T KOG0666|consen 261 IFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYF 340 (438)
T ss_pred HHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccccc
Confidence 999999999999999999998644333332111 11 1122345669999999999999999999999999999
Q ss_pred CCC
Q psy6391 301 ADK 303 (313)
Q Consensus 301 ~~~ 303 (313)
.+-
T Consensus 341 ~~d 343 (438)
T KOG0666|consen 341 TED 343 (438)
T ss_pred ccC
Confidence 984
No 102
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=8.6e-44 Score=306.23 Aligned_cols=288 Identities=43% Similarity=0.782 Sum_probs=230.8
Q ss_pred hhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc---
Q psy6391 10 KSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENY--- 86 (313)
Q Consensus 10 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 86 (313)
...+++|++.+.||.|++|.||+|.++.+++.|++|.++...........+.+|+.+++.++|||++++++++.+..
T Consensus 3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence 34678999999999999999999999988999999999766544444567788999999999999999999987654
Q ss_pred -------EEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEec
Q psy6391 87 -------RLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVAD 159 (313)
Q Consensus 87 -------~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~d 159 (313)
..++++||+++++...+... ...+++..++.++.||+.||.|||+.|++|+||+|+||+++.++. ++|+|
T Consensus 83 ~~~~~~~~~~lv~e~~~~~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~-~kl~d 159 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDHDLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQ-IKLAD 159 (302)
T ss_pred hccccCCcEEEEEcccCccHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCc-EEeCc
Confidence 78999999999887776652 335899999999999999999999999999999999999998877 99999
Q ss_pred CCCccccCCCC-cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCC
Q psy6391 160 FGLARAFGVPV-RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTE 238 (313)
Q Consensus 160 f~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~ 238 (313)
||.+....... .......++..|+|||.+.+....+.++|+||+|++++++++|+.||...........+......+..
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (302)
T cd07864 160 FGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCP 239 (302)
T ss_pred ccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 99987654332 11222345778999998866555789999999999999999999999988887777777776666666
Q ss_pred CCCCCCCCCCCccccCCCC-chhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 239 DNWPGVSKLPDYKTTFPEW-SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
..+++....+.+....... ...........++..+.+++.+||+.||.+||++.++++||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 240 AVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred hhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 6665544333221111110 0011222334579999999999999999999999999999997
No 103
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=6.9e-44 Score=299.50 Aligned_cols=255 Identities=27% Similarity=0.468 Sum_probs=215.7
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEec
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
+|.+.+.||+|++|.||++.+..+++.|++|.+............+.+|+.+++.++|||++++++++...+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 58899999999999999999998999999999876544444457788999999999999999999999999999999999
Q ss_pred ccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccc
Q psy6391 95 MSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIY 173 (313)
Q Consensus 95 ~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~ 173 (313)
+.+ +|.+++... ....+++..++.++.|++.+|.|||+.|++|+||+|+||+++.++. ++|+|||.+..........
T Consensus 81 ~~~~~L~~~l~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~-~~l~df~~~~~~~~~~~~~ 158 (256)
T cd08529 81 AENGDLHKLLKMQ-RGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDN-VKIGDLGVAKLLSDNTNFA 158 (256)
T ss_pred CCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCC-EEEcccccceeccCccchh
Confidence 975 888887753 2346899999999999999999999999999999999999998877 9999999987765443333
Q ss_pred ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcccc
Q psy6391 174 THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT 253 (313)
Q Consensus 174 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (313)
....++..|+|||.+.+.. ++.++|+||||+++++|++|+.||.................++..
T Consensus 159 ~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------- 222 (256)
T cd08529 159 NTIVGTPYYLSPELCEDKP-YNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVS--------------- 222 (256)
T ss_pred hccccCccccCHHHhcCCC-CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc---------------
Confidence 3446788899999987654 789999999999999999999999988766655554432211111
Q ss_pred CCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 254 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
..++.++.+++.+||+.+|++||++.+++.|||+
T Consensus 223 -------------~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 223 -------------QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred -------------cccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 1367899999999999999999999999999996
No 104
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.8e-44 Score=312.57 Aligned_cols=250 Identities=26% Similarity=0.422 Sum_probs=206.2
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcEEEEEEecccc
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKEL-NHPNIVQLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (313)
+.||+|++|.||++.+..+++.||+|+++.... .......+..|..+++.+ +||||+++++++.+.+.+++||||+.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 469999999999999998999999999976531 222235567788888887 799999999999999999999999975
Q ss_pred -CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccc
Q psy6391 98 -DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHE 176 (313)
Q Consensus 98 -~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~ 176 (313)
+|...+.. ...+++..+..++.||+.||.|||+.|++|+||||+||+++.++. ++|+|||++.............
T Consensus 81 ~~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~-~kl~Dfg~~~~~~~~~~~~~~~ 156 (318)
T cd05570 81 GDLMFHIQR---SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGH-IKIADFGMCKEGILGGVTTSTF 156 (318)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCc-EEecccCCCeecCcCCCcccce
Confidence 77666654 335899999999999999999999999999999999999999877 9999999886532222222344
Q ss_pred cccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCC
Q psy6391 177 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE 256 (313)
Q Consensus 177 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (313)
.|+..|+|||.+.+. .++.++|+||+|+++|+|++|..||...+.......+...... ++
T Consensus 157 ~g~~~y~aPE~~~~~-~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~------------------~~- 216 (318)
T cd05570 157 CGTPDYIAPEILSYQ-PYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVR------------------YP- 216 (318)
T ss_pred ecCccccCHHHhcCC-CCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC------------------CC-
Confidence 688999999998764 4789999999999999999999999987776665554331100 00
Q ss_pred CchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCH-----HHHhcCCCCCCC
Q psy6391 257 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINA-----ENALKHKYFADK 303 (313)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~e~l~h~~~~~~ 303 (313)
..++.++.+||.+||+.||.+||++ .++++||||+..
T Consensus 217 ----------~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 217 ----------RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred ----------CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 2478999999999999999999999 999999999873
No 105
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=5.7e-44 Score=304.30 Aligned_cols=279 Identities=39% Similarity=0.658 Sum_probs=216.9
Q ss_pred ceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEeC--cEEEEEE
Q psy6391 16 YEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIEN--YRLYLIF 92 (313)
Q Consensus 16 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~--~~~~lv~ 92 (313)
|++.+.||+|++|.||++.+..++..+++|.++....... .....+|+.++.++ +|+|++++++++.++ +..++|+
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE-QVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch-hhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 6889999999999999999998999999999876533322 23445788889888 499999999999987 8999999
Q ss_pred eccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 93 EFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 93 e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
||+++++.+.+... ...+++..++.++.||+.||.+||+.|++|+||+|+||+++. +. ++|+|||.+........
T Consensus 80 e~~~~~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~-~kl~dfg~~~~~~~~~~- 154 (282)
T cd07831 80 ELMDMNLYELIKGR--KRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DI-LKLADFGSCRGIYSKPP- 154 (282)
T ss_pred ecCCccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CC-eEEEecccccccccCCC-
Confidence 99999888877652 245899999999999999999999999999999999999998 55 99999999976643322
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
.....++..|+|||.+......+.++|+||+|+++|+|++|..||...+..+....+......+................
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07831 155 YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNY 234 (282)
T ss_pred cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccc
Confidence 12345688899999876555578999999999999999999999998877776666655444333311100000011111
Q ss_pred cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 253 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
.++.............++.++.++|.+||++||.+||++.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 235 NFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred cCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 122222222222334679999999999999999999999999999998
No 106
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.7e-44 Score=306.39 Aligned_cols=282 Identities=57% Similarity=0.975 Sum_probs=229.9
Q ss_pred ceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecc
Q psy6391 16 YEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFM 95 (313)
Q Consensus 16 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 95 (313)
|++.+.||.|++|.||++.+..+++.+++|.+............+.+|+.++++++|++++++++++.+++..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 67889999999999999999889999999998766544444577889999999999999999999999999999999999
Q ss_pred ccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccccc
Q psy6391 96 SMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTH 175 (313)
Q Consensus 96 ~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~ 175 (313)
++++...+... ...+++..+..++.||+.+|.+||+.|++|+||+|+||+++.++. ++|+|||.+............
T Consensus 81 ~~~l~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~-~~l~df~~~~~~~~~~~~~~~ 157 (283)
T cd05118 81 DTDLYKLIKDR--QRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGV-LKLADFGLARSFGSPVRPYTH 157 (283)
T ss_pred CCCHHHHHHhh--cccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCc-EEEeeeeeeEecCCCcccccC
Confidence 99988887763 246899999999999999999999999999999999999998876 999999999776554323334
Q ss_pred ccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC-ccccC
Q psy6391 176 EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD-YKTTF 254 (313)
Q Consensus 176 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 254 (313)
..++..|+|||.+.+....+.++|+||+|+++|++++|+.||...+..+....+......+....+........ ....+
T Consensus 158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05118 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSF 237 (283)
T ss_pred ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhh
Confidence 45778899999987664689999999999999999999999998888887777776665555544444332111 11111
Q ss_pred CCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 255 PEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
+...........+.++.++.+||.+||+.||.+||++.+++.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 238 PKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred ccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 2211122223335689999999999999999999999999999997
No 107
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.5e-44 Score=311.28 Aligned_cols=250 Identities=26% Similarity=0.398 Sum_probs=204.2
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcEEEEEEecccc
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKEL-NHPNIVQLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (313)
+.||+|++|.||++.++.+++.||+|+++..... .........|..++... +||+|+++++++.+.+++++||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4699999999999999999999999999764321 22234566777777765 899999999999999999999999986
Q ss_pred -CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccc
Q psy6391 98 -DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHE 176 (313)
Q Consensus 98 -~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~ 176 (313)
+|...+.. ...+++..+..++.||+.||+|||+.|++|+||||+||+++.++. ++|+|||++.............
T Consensus 81 g~L~~~i~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~-~kl~Dfg~~~~~~~~~~~~~~~ 156 (316)
T cd05620 81 GDLMFHIQD---KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGH-IKIADFGMCKENVFGDNRASTF 156 (316)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCC-EEeCccCCCeecccCCCceecc
Confidence 77776654 345899999999999999999999999999999999999998876 9999999986543222333445
Q ss_pred cccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCC
Q psy6391 177 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE 256 (313)
Q Consensus 177 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (313)
.|+..|+|||.+.+. .++.++|+||+|+++|+|++|..||...+.......+.... +. ++
T Consensus 157 ~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~--~~----------------~~- 216 (316)
T cd05620 157 CGTPDYIAPEILQGL-KYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDT--PH----------------YP- 216 (316)
T ss_pred CCCcCccCHHHHcCC-CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CC----------------CC-
Confidence 689999999998764 48899999999999999999999999877766555543211 00 01
Q ss_pred CchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCH-HHHhcCCCCCCC
Q psy6391 257 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINA-ENALKHKYFADK 303 (313)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~e~l~h~~~~~~ 303 (313)
..++.++.++|.+||+.||++||++ +++++||||+..
T Consensus 217 ----------~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 217 ----------RWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI 254 (316)
T ss_pred ----------CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence 1367899999999999999999998 589999999873
No 108
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=3.7e-44 Score=306.08 Aligned_cols=284 Identities=39% Similarity=0.692 Sum_probs=219.1
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
++|++.+.||.|++|.||++.+..+++.+++|.+............+.+|+.+++.++|+||+++++++.+++..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 47999999999999999999998889999999987655444445678899999999999999999999999999999999
Q ss_pred ccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccc
Q psy6391 94 FMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIY 173 (313)
Q Consensus 94 ~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~ 173 (313)
|+++++.+.+.. ....+++.++..++.||+.+|.|||+.|++|+||+|+||+++.++. ++|+|||++..........
T Consensus 81 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~-~~l~dfg~~~~~~~~~~~~ 157 (286)
T cd07846 81 FVDHTVLDDLEK--YPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGV-VKLCDFGFARTLAAPGEVY 157 (286)
T ss_pred cCCccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCc-EEEEeeeeeeeccCCcccc
Confidence 999855444433 2334899999999999999999999999999999999999998876 9999999987664443433
Q ss_pred ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCc-cc
Q psy6391 174 THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY-KT 252 (313)
Q Consensus 174 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 252 (313)
....++..|+|||.+.+....+.++|+||+|+++|+|++|..||......+....+..................+.. ..
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07846 158 TDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGM 237 (286)
T ss_pred CcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcc
Confidence 44567888999999876555788999999999999999999999877766665555543322111100000000000 00
Q ss_pred cCCCCc-hhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 253 TFPEWS-NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 253 ~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
..+... ........++++..+.+|+.+||+.+|++||++.+++.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 238 RLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred ccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 000000 001112235789999999999999999999999999999998
No 109
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.2e-44 Score=313.78 Aligned_cols=289 Identities=43% Similarity=0.685 Sum_probs=234.4
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc-----EEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENY-----RLY 89 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~ 89 (313)
+|++.+.||.|++|.||+|.+..+++.+++|.+............+.+|+.+++.++|+|++++.+++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 589999999999999999999888999999998765443444577889999999999999999999998775 789
Q ss_pred EEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 90 LIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 90 lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
++|+|++++|.+.+.. ...+++..++.++.||+.||.+||+.|++|+||+|+||+++.++. ++|+|||.+......
T Consensus 81 lv~e~~~~~l~~~l~~---~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~-~~L~dfg~~~~~~~~ 156 (330)
T cd07834 81 IVTELMETDLHKVIKS---PQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCD-LKICDFGLARGVDPD 156 (330)
T ss_pred EEecchhhhHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC-EEEcccCceEeeccc
Confidence 9999999888777754 336999999999999999999999999999999999999999876 999999999876544
Q ss_pred C---cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCC--
Q psy6391 170 V---RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV-- 244 (313)
Q Consensus 170 ~---~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 244 (313)
. .......++..|+|||.+.+....+.++|+||||+++|+|++|..||......+....+......+....+...
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 236 (330)
T cd07834 157 EDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITS 236 (330)
T ss_pred ccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccc
Confidence 3 12334467888999999877646899999999999999999999999999888888888777666655443311
Q ss_pred CCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCC
Q psy6391 245 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP 307 (313)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~ 307 (313)
.....+....+......+....+.++.++.++|.+||+.+|.+||++.+++.||||++..+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~ 299 (330)
T cd07834 237 EKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPE 299 (330)
T ss_pred cchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccc
Confidence 111111111222222233334466899999999999999999999999999999999865543
No 110
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3.6e-44 Score=306.05 Aligned_cols=259 Identities=25% Similarity=0.385 Sum_probs=210.3
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
.|++.+.||+|++|.||++.+..+++.||+|++...... ......+.+|+.+++.++|++|+++++.+..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 488999999999999999999888999999998754322 2223456789999999999999999999999999999999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
|+.+ +|.+.+... ....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||++....... .
T Consensus 81 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~-~~l~Dfg~~~~~~~~~-~ 157 (285)
T cd05605 81 LMNGGDLKFHIYNM-GNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGH-IRISDLGLAVEIPEGE-T 157 (285)
T ss_pred ccCCCcHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCC-EEEeeCCCceecCCCC-c
Confidence 9985 777666542 2345899999999999999999999999999999999999998876 9999999987654322 2
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
.....|+..|+|||.+.+. .++.++|+||+|+++|++++|..||...........+.......... .
T Consensus 158 ~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~----------- 224 (285)
T cd05605 158 IRGRVGTVGYMAPEVVKNE-RYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEE-Y----------- 224 (285)
T ss_pred cccccCCCCccCcHHhcCC-CCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccc-c-----------
Confidence 2334678999999998754 47889999999999999999999998765544333332211110000 0
Q ss_pred cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCC-----CHHHHhcCCCCCC
Q psy6391 253 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFAD 302 (313)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~e~l~h~~~~~ 302 (313)
...++..+.+||.+||+.||.+|| ++.++++||||++
T Consensus 225 -------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~ 266 (285)
T cd05605 225 -------------SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRT 266 (285)
T ss_pred -------------CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence 024789999999999999999999 9999999999987
No 111
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.5e-45 Score=317.10 Aligned_cols=250 Identities=27% Similarity=0.429 Sum_probs=207.9
Q ss_pred eeeeccccceEEEEEEe---CcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecc
Q psy6391 19 VEKIGEGTYGVVYKAKN---KVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFM 95 (313)
Q Consensus 19 ~~~lg~g~~~~v~~~~~---~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 95 (313)
++.||+|++|.||++.+ ..+++.||+|++............+.+|+.++++++||||+++++++.+++..++||||+
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 36799999999999876 356889999999765433333356778999999999999999999999999999999999
Q ss_pred cc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccc
Q psy6391 96 SM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYT 174 (313)
Q Consensus 96 ~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~ 174 (313)
.+ +|.+.+.. ...+++..++.++.||+.||.|||+.|++|+||||+||+++.++. ++|+|||++...........
T Consensus 81 ~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~-~kL~Dfg~~~~~~~~~~~~~ 156 (318)
T cd05582 81 RGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAY 156 (318)
T ss_pred CCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCc-EEEeeccCCcccCCCCCcee
Confidence 75 77777654 345899999999999999999999999999999999999998877 99999999876544433334
Q ss_pred cccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccC
Q psy6391 175 HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTF 254 (313)
Q Consensus 175 ~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (313)
...|+..|+|||.+.... .+.++|+||||+++|+|++|+.||...........+...... +
T Consensus 157 ~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~------------------~ 217 (318)
T cd05582 157 SFCGTVEYMAPEVVNRRG-HTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLG------------------M 217 (318)
T ss_pred cccCChhhcCHHHHcCCC-CCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCC------------------C
Confidence 457899999999987644 789999999999999999999999988776666555431110 0
Q ss_pred CCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC-----HHHHhcCCCCCC
Q psy6391 255 PEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN-----AENALKHKYFAD 302 (313)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~e~l~h~~~~~ 302 (313)
+ ..+++++.++|++||+.||++||+ +.++++||||+.
T Consensus 218 p-----------~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~ 259 (318)
T cd05582 218 P-----------QFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFST 259 (318)
T ss_pred C-----------CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCC
Confidence 0 247899999999999999999999 788999999976
No 112
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.7e-44 Score=311.06 Aligned_cols=250 Identities=26% Similarity=0.428 Sum_probs=204.0
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcEEEEEEecccc
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKEL-NHPNIVQLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (313)
+.||+|++|.||+|.+..+++.||+|+++.... .......+..|..++... +||+|+++++++..++..++||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 468999999999999998999999999976532 122234455666676654 899999999999999999999999975
Q ss_pred -CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccc
Q psy6391 98 -DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHE 176 (313)
Q Consensus 98 -~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~ 176 (313)
+|...+.. ...+++..++.++.||+.||.|||+.|++|+||||+||+++.++. ++|+|||++.............
T Consensus 81 g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~-~kL~Dfg~a~~~~~~~~~~~~~ 156 (316)
T cd05592 81 GDLMFHIQS---SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGH-IKIADFGMCKENMNGEGKASTF 156 (316)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCC-EEEccCcCCeECCCCCCccccc
Confidence 77776654 335899999999999999999999999999999999999998877 9999999987653333333445
Q ss_pred cccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCC
Q psy6391 177 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE 256 (313)
Q Consensus 177 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (313)
.|+..|+|||.+.+.. ++.++|+||+|+++|+|++|..||...+.......+... .+. ++
T Consensus 157 ~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--~~~----------------~~- 216 (316)
T cd05592 157 CGTPDYIAPEILKGQK-YNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND--RPH----------------FP- 216 (316)
T ss_pred cCCccccCHHHHcCCC-CCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCC----------------CC-
Confidence 7899999999987644 789999999999999999999999988776666554321 000 00
Q ss_pred CchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCH-HHHhcCCCCCCC
Q psy6391 257 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINA-ENALKHKYFADK 303 (313)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~e~l~h~~~~~~ 303 (313)
..++.++.++|.+||+.||.+||++ .+++.||||.+.
T Consensus 217 ----------~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 217 ----------RWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred ----------CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence 2367899999999999999999986 588899999873
No 113
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=7.5e-44 Score=308.70 Aligned_cols=278 Identities=41% Similarity=0.717 Sum_probs=209.4
Q ss_pred eeeeccccceEEEEEEeCc--CCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEE--eCcEEEEEEec
Q psy6391 19 VEKIGEGTYGVVYKAKNKV--TGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMI--ENYRLYLIFEF 94 (313)
Q Consensus 19 ~~~lg~g~~~~v~~~~~~~--~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--~~~~~~lv~e~ 94 (313)
..+||+|+||.||+|.... ++..|++|.+.... ....+.+|+.+++.++||||+++++++. .+...++++||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 3679999999999999653 56789999886432 2356788999999999999999999885 35678999999
Q ss_pred cccCHHHHHhhCC------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecC---CCeEEEecCCCccc
Q psy6391 95 MSMDLKKYIDTVP------KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAK---SNIVKVADFGLARA 165 (313)
Q Consensus 95 ~~~~l~~~~~~~~------~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~---~~~~~l~df~~~~~ 165 (313)
++++|.+.+.... ....+++..++.++.||+.||.|||+.|++|+||||+||++..+ ...++|+|||++..
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07867 82 AEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred eCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence 9999888775321 22358899999999999999999999999999999999999422 23499999999976
Q ss_pred cCCCCc---ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHHhc
Q psy6391 166 FGVPVR---IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE---------IDQLFRIFRVL 233 (313)
Q Consensus 166 ~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~---------~~~~~~~~~~~ 233 (313)
...... ......++..|+|||.+.+...++.++||||+|+++|+|++|+.||..... .....++....
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07867 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVM 241 (317)
T ss_pred cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhc
Confidence 643321 223346788999999987656689999999999999999999999975432 24455566666
Q ss_pred CCCCCCCCCCCCCCCCccccCCCC---------chhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 234 TTPTEDNWPGVSKLPDYKTTFPEW---------SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
+.+....|......+.+......+ ............+..+.+++.+||+.||.+|||+.|+|+||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 242 GFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred CCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 666666655544332211111000 0001111123456789999999999999999999999999998
No 114
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.9e-44 Score=312.60 Aligned_cols=250 Identities=28% Similarity=0.410 Sum_probs=200.4
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcEEEEEEecccc
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKEL-NHPNIVQLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (313)
+.||+|++|.||++.+..+++.||+|+++..... ......+..|..+++.+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4689999999999999999999999999765322 22235577899999888 799999999999999999999999986
Q ss_pred -CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccc
Q psy6391 98 -DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHE 176 (313)
Q Consensus 98 -~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~ 176 (313)
+|...+.. .+.+++..++.++.||+.||.|||++|++|+||||+||+++.++. ++|+|||++.............
T Consensus 81 g~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~-~kL~Dfg~~~~~~~~~~~~~~~ 156 (329)
T cd05588 81 GDLMFHMQR---QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGH-IKLTDYGMCKEGIRPGDTTSTF 156 (329)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCC-EEECcCccccccccCCCccccc
Confidence 77666654 345999999999999999999999999999999999999998877 9999999986532222223345
Q ss_pred cccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy6391 177 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE--------IDQLFRIFRVLTTPTEDNWPGVSKLP 248 (313)
Q Consensus 177 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
.|+..|+|||++.+. .++.++|+||+|+++|+|++|..||..... .....+.......
T Consensus 157 ~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 222 (329)
T cd05588 157 CGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI------------- 222 (329)
T ss_pred cCCccccCHHHHcCC-CCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC-------------
Confidence 789999999998764 478999999999999999999999963211 1111111110000
Q ss_pred CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC------HHHHhcCCCCCC
Q psy6391 249 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN------AENALKHKYFAD 302 (313)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps------~~e~l~h~~~~~ 302 (313)
.++ ..++.++.++|.+||+.||.+||+ ++++++||||+.
T Consensus 223 ----~~p-----------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 223 ----RIP-----------RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred ----CCC-----------CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 011 247899999999999999999987 799999999986
No 115
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=5.3e-44 Score=324.71 Aligned_cols=281 Identities=23% Similarity=0.332 Sum_probs=210.5
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcC------CCCceeeceeEEeC
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELN------HPNIVQLHDTMIEN 85 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~ 85 (313)
..++|++.+.||+|+||.||++.+..+++.||+|+++.... .......|+.+++.+. |.+++.+++++..+
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK---YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh---hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 45789999999999999999999998999999999864321 1244566777777764 44588888888754
Q ss_pred -cEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCCEEEecCCC----------
Q psy6391 86 -YRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHK-RRVLHRDLKPQNLLIDAKSN---------- 153 (313)
Q Consensus 86 -~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~-~~i~H~di~~~Nil~~~~~~---------- 153 (313)
+++++||++++++|.+++.. .+.+++..++.++.||+.||.|||+ .||+|+||||+|||++.++.
T Consensus 204 ~~~~~iv~~~~g~~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~ 280 (467)
T PTZ00284 204 TGHMCIVMPKYGPCLLDWIMK---HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRAL 280 (467)
T ss_pred CceEEEEEeccCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccccccc
Confidence 57899999999888887765 3458999999999999999999998 59999999999999987653
Q ss_pred -----eEEEecCCCccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy6391 154 -----IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFR 228 (313)
Q Consensus 154 -----~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~ 228 (313)
.+||+|||.+...... ....+||..|+|||++.+.. ++.++|||||||++|+|++|+.||...+..+....
T Consensus 281 ~~~~~~vkl~DfG~~~~~~~~---~~~~~gt~~Y~APE~~~~~~-~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~ 356 (467)
T PTZ00284 281 PPDPCRVRICDLGGCCDERHS---RTAIVSTRHYRSPEVVLGLG-WMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHL 356 (467)
T ss_pred CCCCceEEECCCCccccCccc---cccccCCccccCcHHhhcCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 3899999987543222 23457899999999987654 89999999999999999999999998888777777
Q ss_pred HHHhcCCCCCCCCCCCCCCCC---cccc----CCCCchhhhhhh-----c--cCCCHHHHHHHHHHhccCCCCCCCHHHH
Q psy6391 229 IFRVLTTPTEDNWPGVSKLPD---YKTT----FPEWSNFCLDKH-----V--KNLDQDGLDLLEKTLIYCPATRINAENA 294 (313)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~-----~--~~~~~~l~~li~~~l~~dp~~Rps~~e~ 294 (313)
+....+.++.... ......+ +... .+......+... . ...++.+.+||.+||+.||++|||+.|+
T Consensus 357 i~~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~ 435 (467)
T PTZ00284 357 MEKTLGRLPSEWA-GRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQM 435 (467)
T ss_pred HHHHcCCCCHHHH-hhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHH
Confidence 6665554432211 1000000 0000 000000000000 0 0124678899999999999999999999
Q ss_pred hcCCCCCCC
Q psy6391 295 LKHKYFADK 303 (313)
Q Consensus 295 l~h~~~~~~ 303 (313)
|+||||.+.
T Consensus 436 L~Hp~~~~~ 444 (467)
T PTZ00284 436 TTHPYVLKY 444 (467)
T ss_pred hcCcccccc
Confidence 999999984
No 116
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=3.4e-44 Score=316.58 Aligned_cols=266 Identities=26% Similarity=0.378 Sum_probs=216.0
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELNHPNIVQLHDTMIENY 86 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 86 (313)
+.....++|++.+.||+|++|.||++.++.+++.+|+|++..... .......+.+|..+++.++||||+++++.+.+++
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 116 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 345567899999999999999999999999999999999865331 2222345778999999999999999999999999
Q ss_pred EEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 87 RLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 87 ~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
..++||||++| +|.+++.. ..+++..++.++.||+.||.|||++|++|+||||+|||++.++. ++|+|||++..
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~-ikL~DfG~a~~ 191 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGH-LKLADFGTCMK 191 (371)
T ss_pred EEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCC-EEEEeCCceeE
Confidence 99999999975 78777754 23789999999999999999999999999999999999998877 99999999976
Q ss_pred cCCCC-cccccccccccccchhhhcCCC---CCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCC
Q psy6391 166 FGVPV-RIYTHEVVTLWYRAPEVLLGSQ---RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNW 241 (313)
Q Consensus 166 ~~~~~-~~~~~~~~~~~~~~PE~~~~~~---~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
..... .......||..|+|||++.... .++.++||||||+++|+|++|..||...+.......+........ +
T Consensus 192 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~---~ 268 (371)
T cd05622 192 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT---F 268 (371)
T ss_pred cCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCccc---C
Confidence 54322 1223456899999999986432 368899999999999999999999998887766666654221111 0
Q ss_pred CCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCC--CCCHHHHhcCCCCCCC
Q psy6391 242 PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPAT--RINAENALKHKYFADK 303 (313)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~--Rps~~e~l~h~~~~~~ 303 (313)
+. ...++.++.++|..||..++.+ |+++.++++|+||++.
T Consensus 269 ~~----------------------~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 269 PD----------------------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred CC----------------------cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 00 0247899999999999855544 8899999999999873
No 117
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.6e-44 Score=313.54 Aligned_cols=249 Identities=25% Similarity=0.381 Sum_probs=203.4
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHH-HHhhcCCCCceeeceeEEeCcEEEEEEecccc
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREIS-VLKELNHPNIVQLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (313)
+.||+|++|.||++.+..+++.||+|++...... ......+..|.. +++.++||||+++++.+.+.+..++||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 4689999999999999999999999998754321 111234445544 56778999999999999999999999999986
Q ss_pred -CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccc
Q psy6391 98 -DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHE 176 (313)
Q Consensus 98 -~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~ 176 (313)
+|...+.. .+.+++..++.++.||+.||.|||++|++|+||||+|||++.++. ++|+|||++.............
T Consensus 81 g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~-~kl~Dfg~~~~~~~~~~~~~~~ 156 (323)
T cd05575 81 GELFFHLQR---ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGH-VVLTDFGLCKEGIEHSKTTSTF 156 (323)
T ss_pred CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCc-EEEeccCCCcccccCCCccccc
Confidence 77776654 345899999999999999999999999999999999999998877 9999999986543333333445
Q ss_pred cccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCC
Q psy6391 177 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE 256 (313)
Q Consensus 177 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (313)
.|+..|+|||.+.+. .++.++||||||+++|+|++|..||...+.......+.......
T Consensus 157 ~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-------------------- 215 (323)
T cd05575 157 CGTPEYLAPEVLRKQ-PYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRL-------------------- 215 (323)
T ss_pred cCChhhcChhhhcCC-CCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCC--------------------
Confidence 689999999998764 48899999999999999999999999877766665554321100
Q ss_pred CchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCH----HHHhcCCCCCC
Q psy6391 257 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINA----ENALKHKYFAD 302 (313)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~----~e~l~h~~~~~ 302 (313)
.+.++.++.++|.+||+.||.+||++ .++++||||..
T Consensus 216 ---------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~ 256 (323)
T cd05575 216 ---------KPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSS 256 (323)
T ss_pred ---------CCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCC
Confidence 02478999999999999999999987 69999999976
No 118
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.8e-43 Score=302.15 Aligned_cols=284 Identities=41% Similarity=0.735 Sum_probs=222.2
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
++|++.+.||.|++|.||+|.+..+++.|++|.++...........+.+|+.+++.++|+||+++++++..++..++++|
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 47999999999999999999999889999999987665555555788999999999999999999999999999999999
Q ss_pred ccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc-c
Q psy6391 94 FMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR-I 172 (313)
Q Consensus 94 ~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~-~ 172 (313)
|+++++...+.. ....+++..++.++.||+.++.+||+.|++|+||+|+||+++.++. ++|+|||.+........ .
T Consensus 81 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~-~kl~d~g~~~~~~~~~~~~ 157 (288)
T cd07833 81 YVERTLLELLEA--SPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGV-LKLCDFGFARALRARPASP 157 (288)
T ss_pred cCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCC-EEEEeeecccccCCCcccc
Confidence 999876665543 2344899999999999999999999999999999999999998877 99999999877654332 2
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
.....++..|+|||.+.+...++.++|+||+|+++|++++|+.||......+.........................+..
T Consensus 158 ~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07833 158 LTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAG 237 (288)
T ss_pred ccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccc
Confidence 23456788899999987764688999999999999999999999988776665555544333322221111111111110
Q ss_pred -cCCCCc-hhhhhhhcc-CCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 253 -TFPEWS-NFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 253 -~~~~~~-~~~~~~~~~-~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
..+... ........+ .++.++.+||++||+.+|++||++++++.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 238 VAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred cccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 111111 111122222 358999999999999999999999999999998
No 119
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=6.4e-44 Score=310.67 Aligned_cols=262 Identities=25% Similarity=0.357 Sum_probs=211.2
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccC-CCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEN-DDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
++|++.+.||+|++|.||++.+..+++.||+|++.... ........+.+|..+++.++|++|+++++.+.+++++++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 57999999999999999999999999999999987532 12222355778999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
||+.| +|.+++... ...+++..++.++.||+.||+|||++|++|+||||+|||++.++. ++|+|||++........
T Consensus 81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~-~kl~Dfg~~~~~~~~~~ 157 (331)
T cd05597 81 DYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGH-IRLADFGSCLRLLADGT 157 (331)
T ss_pred ecCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCC-EEEEECCceeecCCCCC
Confidence 99975 888887652 345899999999999999999999999999999999999998877 99999999866543222
Q ss_pred -ccccccccccccchhhhcC----CCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 172 -IYTHEVVTLWYRAPEVLLG----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 172 -~~~~~~~~~~~~~PE~~~~----~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
......|+..|+|||++.. ...++.++|+||+|+++|+|++|+.||......+....+........
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~--------- 228 (331)
T cd05597 158 VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQ--------- 228 (331)
T ss_pred ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCccc---------
Confidence 1123468999999999863 23468899999999999999999999998776666555543211000
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCC--CCCHHHHhcCCCCCC
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPAT--RINAENALKHKYFAD 302 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~--Rps~~e~l~h~~~~~ 302 (313)
+ ......++.++.++|++||..++++ |+++.++++||||++
T Consensus 229 -------~--------~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~ 271 (331)
T cd05597 229 -------F--------PPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEG 271 (331)
T ss_pred -------C--------CCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCC
Confidence 0 0011247899999999998765544 889999999999976
No 120
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=5.8e-44 Score=308.87 Aligned_cols=250 Identities=26% Similarity=0.415 Sum_probs=204.3
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcEEEEEEecccc
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKEL-NHPNIVQLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (313)
+.||+|++|.||+|.+..+++.||+|+++.... ..........|..+++.. +||+|+++++++.+.+.+++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 469999999999999998999999999976532 112234566677777764 899999999999999999999999975
Q ss_pred -CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccc
Q psy6391 98 -DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHE 176 (313)
Q Consensus 98 -~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~ 176 (313)
+|...+.. ...+++..+..++.||+.||.|||+.|++|+||||+||+++.++. ++|+|||++.............
T Consensus 81 g~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~-~kl~Dfg~~~~~~~~~~~~~~~ 156 (316)
T cd05619 81 GDLMFHIQS---CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGH-IKIADFGMCKENMLGDAKTCTF 156 (316)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCC-EEEccCCcceECCCCCCceeee
Confidence 77777764 335889999999999999999999999999999999999998877 9999999987543222333445
Q ss_pred cccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCC
Q psy6391 177 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE 256 (313)
Q Consensus 177 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (313)
.|+..|+|||.+.+. .++.++|+||+|+++|+|++|..||...+.......+... .+.. +
T Consensus 157 ~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~-~~~~-----------------~- 216 (316)
T cd05619 157 CGTPDYIAPEILLGQ-KYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD-NPCY-----------------P- 216 (316)
T ss_pred cCCccccCHHHHcCC-CCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-CCCC-----------------C-
Confidence 689999999998764 4789999999999999999999999987766655554321 1100 0
Q ss_pred CchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHH-HHhcCCCCCCC
Q psy6391 257 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAE-NALKHKYFADK 303 (313)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~-e~l~h~~~~~~ 303 (313)
..++.++.++|.+||+.||.+||++. ++++||||++.
T Consensus 217 ----------~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 217 ----------RWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREI 254 (316)
T ss_pred ----------ccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCC
Confidence 13678999999999999999999996 89999999873
No 121
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.5e-44 Score=316.88 Aligned_cols=258 Identities=28% Similarity=0.432 Sum_probs=210.8
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccC-CCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEN-DDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
++|++++.||+|++|.||++.+..+++.||+|++.... ........+.+|+.++..++|++|+++++.+.+++.+++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999997543 22233466788999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCC-
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV- 170 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~- 170 (313)
||++| +|.+.+.. ...+++..++.++.|++.||.|||+.|++|+||||+|||++.++. ++|+|||++.......
T Consensus 81 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~-vkL~DfG~~~~~~~~~~ 156 (360)
T cd05627 81 EFLPGGDMMTLLMK---KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGH-VKLSDFGLCTGLKKAHR 156 (360)
T ss_pred eCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCC-EEEeeccCCcccccccc
Confidence 99985 77777764 345899999999999999999999999999999999999998877 9999999986442110
Q ss_pred ----------------------------------cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCC
Q psy6391 171 ----------------------------------RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPL 216 (313)
Q Consensus 171 ----------------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~p 216 (313)
......+||..|+|||++.+.. ++.++|+|||||++|+|++|..|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~-~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTG-YNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCC-CCCcceeccccceeeecccCCCC
Confidence 0011346899999999987644 88999999999999999999999
Q ss_pred CCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCC---CHHH
Q psy6391 217 FQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI---NAEN 293 (313)
Q Consensus 217 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp---s~~e 293 (313)
|...........+....... .++. ...+++++.++|.+|+. ||.+|+ ++.+
T Consensus 236 f~~~~~~~~~~~i~~~~~~~----------------~~p~---------~~~~s~~~~~li~~l~~-~p~~R~~~~~~~e 289 (360)
T cd05627 236 FCSETPQETYRKVMNWKETL----------------VFPP---------EVPISEKAKDLILRFCT-DSENRIGSNGVEE 289 (360)
T ss_pred CCCCCHHHHHHHHHcCCCce----------------ecCC---------CCCCCHHHHHHHHHhcc-ChhhcCCCCCHHH
Confidence 99887776666554311000 0000 01378999999999874 999998 5899
Q ss_pred HhcCCCCCC
Q psy6391 294 ALKHKYFAD 302 (313)
Q Consensus 294 ~l~h~~~~~ 302 (313)
+++||||++
T Consensus 290 i~~hp~f~~ 298 (360)
T cd05627 290 IKSHPFFEG 298 (360)
T ss_pred HhcCCCCCC
Confidence 999999987
No 122
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.1e-43 Score=296.80 Aligned_cols=255 Identities=29% Similarity=0.489 Sum_probs=211.6
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEe-CcEEEEEEe
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIE-NYRLYLIFE 93 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e 93 (313)
+|++.+.||+|++|.||.+.++.+++.+++|.+..........+.+.+|+.++++++|++++++++.+.. +..+++++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 5899999999999999999999889999999997655444445678889999999999999999998864 457899999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
|+++ +|.+.+... ....+++.+++.++.+++.++.+||+.|++|+||+|+||+++.++. ++|+|||.+.........
T Consensus 81 ~~~~~~l~~~l~~~-~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~-~~l~df~~~~~~~~~~~~ 158 (257)
T cd08223 81 FCEGGDLYHKLKEQ-KGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNI-IKVGDLGIARVLENQCDM 158 (257)
T ss_pred ccCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCc-EEEecccceEEecccCCc
Confidence 9975 777777653 2345899999999999999999999999999999999999998876 999999998766443333
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
.....++..|+|||.+.+. .++.++|+||+|++++++++|+.||...+.......+.....+...
T Consensus 159 ~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 223 (257)
T cd08223 159 ASTLIGTPYYMSPELFSNK-PYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMP-------------- 223 (257)
T ss_pred cccccCCcCccChhHhcCC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCc--------------
Confidence 3445678889999988664 4788999999999999999999999877665555444332111100
Q ss_pred cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 253 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
..+++++.+++.+|++.||++||++.+++.||||
T Consensus 224 --------------~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 224 --------------KDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred --------------cccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 2477999999999999999999999999999997
No 123
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.5e-44 Score=305.84 Aligned_cols=268 Identities=27% Similarity=0.461 Sum_probs=219.0
Q ss_pred hhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEE
Q psy6391 9 VKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRL 88 (313)
Q Consensus 9 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 88 (313)
.....++|++.+.||.|++|.||++.+..+++.|++|.+...... ..+.+.+|+.+++.++|+|++++++++..++..
T Consensus 14 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~ 91 (297)
T cd06656 14 VGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDEL 91 (297)
T ss_pred cCChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEE
Confidence 355668999999999999999999999889999999998754332 236678899999999999999999999999999
Q ss_pred EEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 89 YLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 89 ~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
++||||+++ +|.+.+.. ..+++.++..++.|++.+|.+||+.|++|+||+|+||+++.++. ++|+|||.+....
T Consensus 92 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~-~~l~Dfg~~~~~~ 166 (297)
T cd06656 92 WVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCAQIT 166 (297)
T ss_pred EEeecccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC-EEECcCccceEcc
Confidence 999999976 77777653 24789999999999999999999999999999999999998876 9999999987654
Q ss_pred CCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCC
Q psy6391 168 VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 247 (313)
Q Consensus 168 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
..........++..|+|||.+.+. .++.++|+||+|+++|++++|..||...+........... ..+...
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~-~~~~~~-------- 236 (297)
T cd06656 167 PEQSKRSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPELQ-------- 236 (297)
T ss_pred CCccCcCcccCCccccCHHHHcCC-CCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccC-CCCCCC--------
Confidence 443333345678889999988754 4789999999999999999999999876553332221111 000000
Q ss_pred CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCCCcc
Q psy6391 248 PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFA 310 (313)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~~~~ 310 (313)
....++..+.+|+.+||..||++||++.+++.||||.....++++.
T Consensus 237 -----------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~~~ 282 (297)
T cd06656 237 -----------------NPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSSLT 282 (297)
T ss_pred -----------------CccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccccccccC
Confidence 0124678999999999999999999999999999999987777653
No 124
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=9.7e-44 Score=308.51 Aligned_cols=255 Identities=25% Similarity=0.411 Sum_probs=210.2
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcC-CCCceeeceeEEeCcEEEEEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELN-HPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 92 (313)
+|+..+.||+|++|.||++.++.+++.||+|++..... .......+..|..+++.+. |++|+.+++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 57889999999999999999999999999999976432 2222345677888888885 677888999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
||+++ +|.+.+.. ...+++..+..++.||+.||.|||++|++|+||||+||+++.++. ++|+|||++........
T Consensus 81 Ey~~~g~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~-ikL~Dfg~~~~~~~~~~ 156 (323)
T cd05615 81 EYVNGGDLMYHIQQ---VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGH-IKIADFGMCKEHMVDGV 156 (323)
T ss_pred cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCC-EEEeccccccccCCCCc
Confidence 99975 77776654 345899999999999999999999999999999999999998877 99999999875433222
Q ss_pred ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcc
Q psy6391 172 IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK 251 (313)
Q Consensus 172 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (313)
......|+..|+|||.+.+. .++.++|+||+|+++|+|++|..||...........+.......
T Consensus 157 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~--------------- 220 (323)
T cd05615 157 TTRTFCGTPDYIAPEIIAYQ-PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSY--------------- 220 (323)
T ss_pred cccCccCCccccCHHHHcCC-CCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC---------------
Confidence 22344689999999998764 47899999999999999999999999887776666665421110
Q ss_pred ccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC-----HHHHhcCCCCCCC
Q psy6391 252 TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN-----AENALKHKYFADK 303 (313)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~e~l~h~~~~~~ 303 (313)
+ ..++.++.+++.+||+.||.+|++ ..++++||||...
T Consensus 221 ---p-----------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 221 ---P-----------KSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred ---C-----------ccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 0 136789999999999999999997 5799999999973
No 125
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=6.1e-44 Score=324.87 Aligned_cols=269 Identities=22% Similarity=0.348 Sum_probs=220.7
Q ss_pred CCCchhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEE
Q psy6391 4 KATDDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMI 83 (313)
Q Consensus 4 ~~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 83 (313)
.++.+.....++|++.+.||+|+||+||++.+..+++.||+|++............+.+|+..+..++|++++++++.+.
T Consensus 22 ~d~~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~ 101 (496)
T PTZ00283 22 KDEATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFA 101 (496)
T ss_pred CCcccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeeccee
Confidence 34556677778999999999999999999999989999999999766544433456778999999999999999998775
Q ss_pred eCc--------EEEEEEecccc-CHHHHHhhC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCC
Q psy6391 84 ENY--------RLYLIFEFMSM-DLKKYIDTV-PKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSN 153 (313)
Q Consensus 84 ~~~--------~~~lv~e~~~~-~l~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~ 153 (313)
..+ .+++||||+.+ +|.+.+... .....+++..++.++.|++.+|.|||+.|++|+||||+|||++.++.
T Consensus 102 ~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~ 181 (496)
T PTZ00283 102 KKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGL 181 (496)
T ss_pred cccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCC
Confidence 332 46899999985 888877643 23456899999999999999999999999999999999999998877
Q ss_pred eEEEecCCCccccCCCC--cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q psy6391 154 IVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFR 231 (313)
Q Consensus 154 ~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~ 231 (313)
++|+|||++....... .......|+..|+|||.+.+. .++.++||||||+++|+|++|+.||...+..........
T Consensus 182 -vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~ 259 (496)
T PTZ00283 182 -VKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRK-PYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLA 259 (496)
T ss_pred -EEEEecccCeeccccccccccccccCCcceeCHHHhCCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc
Confidence 9999999987653321 122345689999999998764 489999999999999999999999998777666555543
Q ss_pred hcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 232 VLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
....+.+ +.+++++.+++.+||+.||.+||++.++++|||++.
T Consensus 260 ~~~~~~~----------------------------~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 260 GRYDPLP----------------------------PSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred CCCCCCC----------------------------CCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 2211110 247899999999999999999999999999999875
No 126
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.8e-43 Score=306.16 Aligned_cols=285 Identities=46% Similarity=0.786 Sum_probs=217.9
Q ss_pred cceeeeeeccccceEEEEEEeCc--CCcEEEEEEecccC-CCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC--cEEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKV--TGALVAIKKIRMEN-DDEGIPATAIREISVLKELNHPNIVQLHDTMIEN--YRLY 89 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~--~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~ 89 (313)
+|++.+.||+|++|.||+|.+.. ++..||+|.+.... ........+.+|+.+++.++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 58899999999999999999987 78999999998654 2233346778899999999999999999999988 8899
Q ss_pred EEEeccccCHHHHHhhCCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEec----CCCeEEEecCCCc
Q psy6391 90 LIFEFMSMDLKKYIDTVPK--GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDA----KSNIVKVADFGLA 163 (313)
Q Consensus 90 lv~e~~~~~l~~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~----~~~~~~l~df~~~ 163 (313)
+||||+++++.+.+..... ...+++..++.++.||+.||.|||+.|++|+||+|+||+++. ++. ++|+|||++
T Consensus 81 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~-~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGV-VKIGDLGLA 159 (316)
T ss_pred EEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccce-EEECCCccc
Confidence 9999999988887764322 236899999999999999999999999999999999999988 655 999999998
Q ss_pred cccCCCCc---ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChH---------HHHHHHHH
Q psy6391 164 RAFGVPVR---IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI---------DQLFRIFR 231 (313)
Q Consensus 164 ~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~---------~~~~~~~~ 231 (313)
........ ......++..|+|||.+.+...++.++|+||||+++++|++|..||...... .....+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE 239 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence 76543322 1123356788999998876556789999999999999999999999865432 23344444
Q ss_pred hcCCCCCCCCCCCCCCCCccc--------cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 232 VLTTPTEDNWPGVSKLPDYKT--------TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
....+....+.....++++.. .++..............+.++.+++.+||+.||.+|||+.|+++||||
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 444444333322222222111 011000000111112578899999999999999999999999999998
No 127
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.5e-43 Score=300.97 Aligned_cols=282 Identities=48% Similarity=0.855 Sum_probs=228.5
Q ss_pred ceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC--cEEEEEEe
Q psy6391 16 YEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN--YRLYLIFE 93 (313)
Q Consensus 16 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~lv~e 93 (313)
|++.+.||.|++|.||+|.+..+++.+++|.+............+.+|+.+++.++|+|++++++++.+. +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 6889999999999999999998899999999987653444456788999999999999999999999988 89999999
Q ss_pred ccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc-c
Q psy6391 94 FMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR-I 172 (313)
Q Consensus 94 ~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~-~ 172 (313)
|++++|.+.+... ...+++..++.++.||+.||++||+.|++|+||+|+||+++.++. ++|+|||.+........ .
T Consensus 81 ~~~~~l~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~-~~l~d~g~~~~~~~~~~~~ 157 (287)
T cd07840 81 YMDHDLTGLLDSP--EVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGV-LKLADFGLARPYTKRNSAD 157 (287)
T ss_pred cccccHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCC-EEEccccceeeccCCCccc
Confidence 9999888777653 246899999999999999999999999999999999999999877 99999999977654321 1
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
.....++..|+|||.+.+...++.++|+||||++++++++|+.||...........+......+....|+....+.....
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07840 158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN 237 (287)
T ss_pred ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhh
Confidence 23345678899999876655578999999999999999999999999888888888777766666666665544311111
Q ss_pred cCC-CCchhhhhhhccC-CCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 253 TFP-EWSNFCLDKHVKN-LDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 253 ~~~-~~~~~~~~~~~~~-~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
..+ ............. ++.++.+++.+||+.+|.+||++.++++||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred ccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 100 0011111222333 48999999999999999999999999999997
No 128
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.3e-43 Score=309.00 Aligned_cols=280 Identities=24% Similarity=0.458 Sum_probs=211.6
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
-++|++.+.||.|++|.||++.+..++..+++|.+..... ......+.+|+++++.++|+||+++++++.+++..++||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 4789999999999999999999998999999998875432 222356889999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCCEEEecCCCeEEEecCCCccccCCCC
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKR-RVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV 170 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~-~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~ 170 (313)
||+.+ +|.+++.. .+.+++..+..++.|++.+|.|||+. +++|+||||+||+++.++. ++|+|||++......
T Consensus 83 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~-~kL~Dfg~~~~~~~~- 157 (333)
T cd06650 83 EHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE-IKLCDFGVSGQLIDS- 157 (333)
T ss_pred ecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCC-EEEeeCCcchhhhhh-
Confidence 99975 88888765 33588999999999999999999985 7999999999999998877 999999998755322
Q ss_pred cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCc
Q psy6391 171 RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY 250 (313)
Q Consensus 171 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (313)
......++..|+|||.+.+. .++.++|+||||+++|++++|+.||.......... .... +...........+..
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~ 231 (333)
T cd06650 158 -MANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELEL-MFGC---PVEGDPAESETSPRP 231 (333)
T ss_pred -ccccCCCCccccCHHHhcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHH-HhcC---cccCCccccccCccc
Confidence 12334678899999998764 48899999999999999999999998765433322 1110 000000000000000
Q ss_pred cc---cC----CC----Cc-----hhhhhhh-----ccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCC
Q psy6391 251 KT---TF----PE----WS-----NFCLDKH-----VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 304 (313)
Q Consensus 251 ~~---~~----~~----~~-----~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~ 304 (313)
+. .+ +. .. ....... ...++.++.+||.+||+.||++|||+.|++.||||+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 306 (333)
T cd06650 232 RPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE 306 (333)
T ss_pred CCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence 00 00 00 00 0000000 113678999999999999999999999999999998853
No 129
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.4e-44 Score=305.48 Aligned_cols=263 Identities=28% Similarity=0.484 Sum_probs=215.3
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
++|++.+.||.|++|.||++.+..++..+++|++...... ....+.+|+.+++.++|+|++++++.+..+...++|||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEE--ELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHH--HHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence 5799999999999999999999888999999998654221 23567889999999999999999999999999999999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
|+++ +|.+++... ...+++..++.++.|++.+|.|||+.|++|+||+|+||+++.++. ++|+|||.+.........
T Consensus 83 ~~~~~~L~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~-~~l~d~g~~~~~~~~~~~ 159 (280)
T cd06611 83 FCDGGALDSIMLEL--ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGD-VKLADFGVSAKNKSTLQK 159 (280)
T ss_pred ccCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCC-EEEccCccchhhcccccc
Confidence 9986 777777653 345899999999999999999999999999999999999998877 999999988765443333
Q ss_pred cccccccccccchhhhcC----CCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy6391 173 YTHEVVTLWYRAPEVLLG----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 248 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~----~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
.....++..|+|||.+.. ...++.++|+||+|+++|+|++|..||...........+.....+...
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------- 229 (280)
T cd06611 160 RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLD---------- 229 (280)
T ss_pred cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcC----------
Confidence 344567888999998742 234678999999999999999999999887665544444321110000
Q ss_pred CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCC
Q psy6391 249 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP 307 (313)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~ 307 (313)
. ...++.++.++|.+||+.+|.+||++.++++||||++..+-.
T Consensus 230 -----~-----------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~ 272 (280)
T cd06611 230 -----Q-----------PSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQSDNK 272 (280)
T ss_pred -----C-----------cccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcccchhH
Confidence 0 024678999999999999999999999999999999875443
No 130
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.1e-43 Score=310.03 Aligned_cols=287 Identities=38% Similarity=0.658 Sum_probs=224.0
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC-----cE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN-----YR 87 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~ 87 (313)
.++|.+.+.||+|++|.||.+.+..++..|++|.+............+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 3579999999999999999999999999999999875433333345677899999999999999999988644 35
Q ss_pred EEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 88 LYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 88 ~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
.++++||++++|.+.+.. ...+++..+..++.||+.||.+||++|++|+||+|+||+++.++. ++|+|||++....
T Consensus 84 ~~lv~e~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~-~kL~Dfg~~~~~~ 159 (337)
T cd07858 84 VYIVYELMDTDLHQIIRS---SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCD-LKICDFGLARTTS 159 (337)
T ss_pred EEEEEeCCCCCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCC-EEECcCccccccC
Confidence 899999999988877764 345999999999999999999999999999999999999998877 9999999997664
Q ss_pred CCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCC
Q psy6391 168 VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 247 (313)
Q Consensus 168 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
..........++..|+|||.+......+.++|+||||+++|+|++|+.||...+.......+....+.+..+.+......
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd07858 160 EKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNE 239 (337)
T ss_pred CCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCch
Confidence 43222334467888999998875445889999999999999999999999887776666666655555444333211110
Q ss_pred C--CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 248 P--DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 248 ~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
. ......+...........+.+++++.++|.+||+.||.+|||+.++++||||+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 240 KARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred hhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 0 0000011111111122235689999999999999999999999999999999874
No 131
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.5e-43 Score=302.39 Aligned_cols=267 Identities=28% Similarity=0.473 Sum_probs=219.0
Q ss_pred hhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEE
Q psy6391 9 VKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRL 88 (313)
Q Consensus 9 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 88 (313)
......+|++.+.||.|++|.||++.+..+++.+++|.+...... ....+.+|+.+++.++|+|++++++++..++..
T Consensus 14 ~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 91 (296)
T cd06655 14 IGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP--KKELIINEILVMKELKNPNIVNFLDSFLVGDEL 91 (296)
T ss_pred cCCCcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc--hHHHHHHHHHHHHhcCCCceeeeeeeEecCceE
Confidence 344556799999999999999999999889999999998754322 246788999999999999999999999999999
Q ss_pred EEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 89 YLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 89 ~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
++|+||+.+ +|...+.. ..+++.++..++.|++.++.+||+.|++|+||+|+||+++.++. ++|+|||++....
T Consensus 92 ~lv~e~~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~-~kl~dfg~~~~~~ 166 (296)
T cd06655 92 FVVMEYLAGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGS-VKLTDFGFCAQIT 166 (296)
T ss_pred EEEEEecCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC-EEEccCccchhcc
Confidence 999999986 77666643 24899999999999999999999999999999999999998876 9999999987654
Q ss_pred CCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCC
Q psy6391 168 VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 247 (313)
Q Consensus 168 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
..........++..|+|||.+.+. .++.++|+||+|+++|++++|..||...+.......+..... +....
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~-~~~~~------- 237 (296)
T cd06655 167 PEQSKRSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT-PELQN------- 237 (296)
T ss_pred cccccCCCcCCCccccCcchhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-cccCC-------
Confidence 433333344678889999988654 478999999999999999999999988776555444332111 11000
Q ss_pred CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCCCc
Q psy6391 248 PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF 309 (313)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~~~ 309 (313)
...+++.+.+||.+||..||.+||++.+++.||||+...+.+..
T Consensus 238 ------------------~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~~~~~ 281 (296)
T cd06655 238 ------------------PEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLSSL 281 (296)
T ss_pred ------------------cccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhccccccC
Confidence 02478899999999999999999999999999999987665543
No 132
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.3e-43 Score=307.91 Aligned_cols=287 Identities=45% Similarity=0.735 Sum_probs=230.7
Q ss_pred hhcccee-eeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCC------------CchhHHHHHHHHhhcCCCCceee
Q psy6391 12 RLEDYEK-VEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEG------------IPATAIREISVLKELNHPNIVQL 78 (313)
Q Consensus 12 ~~~~y~~-~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~------------~~~~~~~e~~~l~~l~~~~i~~~ 78 (313)
.-++|.. .+.||.|++|.||++.+..+++.|++|.++....... ....+.+|+.+++.++|+||+++
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~ 85 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGL 85 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeee
Confidence 3467765 4679999999999999998999999999865432210 11257789999999999999999
Q ss_pred ceeEEeCcEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEe
Q psy6391 79 HDTMIENYRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVA 158 (313)
Q Consensus 79 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~ 158 (313)
++++..++..+++||+++++|.+.+.. ...+++..+..++.|++.||.+||+.|++|+||+|+||+++.++. ++|+
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~-~kl~ 161 (335)
T PTZ00024 86 VDVYVEGDFINLVMDIMASDLKKVVDR---KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGI-CKIA 161 (335)
T ss_pred eEEEecCCcEEEEEeccccCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCC-EEEC
Confidence 999999999999999999998888764 334899999999999999999999999999999999999998876 9999
Q ss_pred cCCCccccCC--------------CCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHH
Q psy6391 159 DFGLARAFGV--------------PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEID 224 (313)
Q Consensus 159 df~~~~~~~~--------------~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~ 224 (313)
|||.+...+. .........++..|+|||.+.+....+.++|+||||+++|++++|..||...+...
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 241 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID 241 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999876541 11122233457789999998765557899999999999999999999999998888
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 225 QLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
....+......+....|+....++..... ....+..........+.++.++|.+||+.+|.+||+++++|.||||++.
T Consensus 242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~ 319 (335)
T PTZ00024 242 QLGRIFELLGTPNEDNWPQAKKLPLYTEF-TPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSD 319 (335)
T ss_pred HHHHHHHHhCCCchhhCcchhhccccccc-CcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence 88888777777776666655443332211 1111222223345678999999999999999999999999999999873
No 133
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=6.7e-44 Score=310.19 Aligned_cols=251 Identities=25% Similarity=0.405 Sum_probs=199.8
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcEEEEEEecccc
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKEL-NHPNIVQLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (313)
+.||+|++|.||++.+..+++.||+|+++..... ......+.+|+.++.++ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4699999999999999999999999999765322 22234567888888777 899999999999999999999999986
Q ss_pred -CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccc
Q psy6391 98 -DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHE 176 (313)
Q Consensus 98 -~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~ 176 (313)
+|...+.. ...+++..++.++.||+.||.|||++|++|+||||+||+++.++. ++|+|||++.............
T Consensus 81 ~~L~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~-~kL~DfG~~~~~~~~~~~~~~~ 156 (329)
T cd05618 81 GDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSTF 156 (329)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCC-EEEeeCCccccccCCCCccccc
Confidence 77666654 345899999999999999999999999999999999999999887 9999999987543222233445
Q ss_pred cccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy6391 177 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS--------EIDQLFRIFRVLTTPTEDNWPGVSKLP 248 (313)
Q Consensus 177 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
.|+..|+|||.+.+. .++.++|+||||+++|+|++|..||.... ......+.......
T Consensus 157 ~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------------- 222 (329)
T cd05618 157 CGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------------- 222 (329)
T ss_pred cCCccccCHHHHcCC-CCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC-------------
Confidence 789999999998764 47899999999999999999999995311 11111111110000
Q ss_pred CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC------HHHHhcCCCCCCC
Q psy6391 249 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN------AENALKHKYFADK 303 (313)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps------~~e~l~h~~~~~~ 303 (313)
.++ ..++..+.++|++||+.||.+||+ +.++++||||++.
T Consensus 223 ----~~p-----------~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 223 ----RIP-----------RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred ----CCC-----------CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 011 247889999999999999999998 5899999999863
No 134
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.3e-43 Score=298.11 Aligned_cols=262 Identities=26% Similarity=0.384 Sum_probs=215.8
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
++|++.+.||.|++|+||+|....++..+++|++....... ....+.+|+..++.++|++++++++.+..+...++++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence 57999999999999999999998889999999987654333 34778899999999999999999999999999999999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
++.+ +|.+.+........+++..++.++.||+.|+.+||+.|++|+||+|+||+++.++. ++|+|||++.........
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~-~~l~df~~~~~~~~~~~~ 158 (267)
T cd06610 80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGS-VKIADFGVSASLADGGDR 158 (267)
T ss_pred ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCC-EEEcccchHHHhccCccc
Confidence 9976 88888765433346899999999999999999999999999999999999998876 999999998766443222
Q ss_pred ----cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy6391 173 ----YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 248 (313)
Q Consensus 173 ----~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
.....++..|+|||.+......+.++|+||+|+++++|++|+.||..........+........ +...
T Consensus 159 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~---- 230 (267)
T cd06610 159 TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPS----LETG---- 230 (267)
T ss_pred cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCC----cCCc----
Confidence 1333578889999998765458999999999999999999999998776655544443321110 0000
Q ss_pred CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 249 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
.....+++++.+++.+||..||++||++.+++.||||
T Consensus 231 ---------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 231 ---------------ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred ---------------cccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 0013578999999999999999999999999999998
No 135
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=8.1e-44 Score=310.61 Aligned_cols=286 Identities=34% Similarity=0.639 Sum_probs=225.6
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEe----CcEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIE----NYRLY 89 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~ 89 (313)
++|++.+.||.|++|.||++.+..++..|++|++............+.+|+.+++.++|+||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 78999999999999999999999999999999987654444445677889999999999999999998863 35789
Q ss_pred EEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 90 LIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 90 lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
+|+||+.++|.+.+.. ...+++..++.++.||+.||.|||+.|++|+||+|+||+++.++. ++|+|||.+......
T Consensus 85 lv~e~~~~~l~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~-~kl~dfg~~~~~~~~ 160 (334)
T cd07855 85 VVMDLMESDLHHIIHS---DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCE-LRIGDFGMARGLSSS 160 (334)
T ss_pred EEEehhhhhHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCc-EEecccccceeeccc
Confidence 9999999888777653 345899999999999999999999999999999999999998877 999999998665322
Q ss_pred Cc----ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCC
Q psy6391 170 VR----IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 245 (313)
Q Consensus 170 ~~----~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
.. ......++..|+|||.+......+.++|+||+|+++|+|++|..||...+.......+....+.++...+....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 240 (334)
T cd07855 161 PTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIG 240 (334)
T ss_pred CcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhc
Confidence 11 11234678889999998665558899999999999999999999999887777666666655555443322211
Q ss_pred CC--CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 246 KL--PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 246 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
.. ......++......+....+.+++++.++|++||+.+|++||++.+++.||||.+-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~ 300 (334)
T cd07855 241 SDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQY 300 (334)
T ss_pred hhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhc
Confidence 10 00011111111222233335679999999999999999999999999999999874
No 136
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.8e-43 Score=301.34 Aligned_cols=264 Identities=27% Similarity=0.458 Sum_probs=216.5
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcE
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYR 87 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 87 (313)
.+.....+|++.+.||+|++|.||++.+..+++.+++|.+....... ...+.+|+.+++.++|+|++++++.+..+..
T Consensus 14 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~--~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~ 91 (296)
T cd06654 14 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNIVNYLDSYLVGDE 91 (296)
T ss_pred ccCCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcch--HHHHHHHHHHHHhCCCCCEeeEEEEEEeCCE
Confidence 34556689999999999999999999998889999999987644332 3678899999999999999999999999999
Q ss_pred EEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 88 LYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 88 ~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
.++||||+.+ +|.+.+.. ..+++.++..++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||.+...
T Consensus 92 ~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~-~kl~dfg~~~~~ 166 (296)
T cd06654 92 LWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCAQI 166 (296)
T ss_pred EEEeecccCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCC-EEECccccchhc
Confidence 9999999975 78777653 24789999999999999999999999999999999999988876 999999998765
Q ss_pred CCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 167 GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
...........++..|+|||.+.+. ..+.++|+||+|+++|++++|+.||.................++. ..
T Consensus 167 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~------ 238 (296)
T cd06654 167 TPEQSKRSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL-QN------ 238 (296)
T ss_pred cccccccCcccCCccccCHHHHcCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCC-CC------
Confidence 4433333345678899999988754 478999999999999999999999987765443333222111000 00
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCC
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 305 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~ 305 (313)
...++..+.+++.+||..||++||++.++++||||.....
T Consensus 239 -------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 239 -------------------PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred -------------------ccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 0247789999999999999999999999999999988644
No 137
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.4e-43 Score=296.35 Aligned_cols=255 Identities=29% Similarity=0.528 Sum_probs=214.3
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEec
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
+|++.+.||.|++|.+|.+.+..+++.|++|.+............+.+|+.+++.++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 58999999999999999999998999999999876543333346788999999999999999999999999999999999
Q ss_pred ccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccc
Q psy6391 95 MSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIY 173 (313)
Q Consensus 95 ~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~ 173 (313)
+.+ +|.+.+.... ...+++.++..++.|++.++.+||+.|++|+||+|+||+++.++. ++|+|||.+..........
T Consensus 81 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~-~~l~d~~~~~~~~~~~~~~ 158 (256)
T cd08218 81 CEGGDLYKKINAQR-GVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGT-IKLGDFGIARVLNSTVELA 158 (256)
T ss_pred CCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCC-EEEeeccceeecCcchhhh
Confidence 975 8877776422 234789999999999999999999999999999999999998876 9999999997765443333
Q ss_pred ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcccc
Q psy6391 174 THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT 253 (313)
Q Consensus 174 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (313)
....++..|+|||.+.+.. .+.++|+||+|++++++++|..||...+..+....+......+..
T Consensus 159 ~~~~~~~~~~~pe~~~~~~-~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 222 (256)
T cd08218 159 RTCIGTPYYLSPEICENRP-YNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVS--------------- 222 (256)
T ss_pred hhccCCccccCHHHhCCCC-CCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCc---------------
Confidence 3345778899999886644 788999999999999999999999887776666555432211110
Q ss_pred CCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 254 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
..++.++.++|.+||+.+|++||++.++++||||
T Consensus 223 -------------~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 223 -------------SHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred -------------ccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 2467899999999999999999999999999998
No 138
>KOG0197|consensus
Probab=100.00 E-value=2.8e-44 Score=309.79 Aligned_cols=255 Identities=26% Similarity=0.415 Sum_probs=216.8
Q ss_pred chhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc
Q psy6391 7 DDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENY 86 (313)
Q Consensus 7 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 86 (313)
+.+...-+.++.++.||+|.||.||.|.+.. ...|++|.++..... .+.+.+|+++++.++|++||++++++..++
T Consensus 199 d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~---~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~ 274 (468)
T KOG0197|consen 199 DPWEIPREELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMS---PEAFLREAQIMKKLRHEKLVKLYGVCTKQE 274 (468)
T ss_pred CCeeecHHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccccC---hhHHHHHHHHHHhCcccCeEEEEEEEecCC
Confidence 3455556677888999999999999999983 347999999866444 378889999999999999999999999998
Q ss_pred EEEEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 87 RLYLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 87 ~~~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
.++|||||+. |+|.++++. ..+..+...+...++.||++|++||+++++||+||-..||||+.+.. +||+|||+++.
T Consensus 275 piyIVtE~m~~GsLl~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~-vKIsDFGLAr~ 352 (468)
T KOG0197|consen 275 PIYIVTEYMPKGSLLDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLV-VKISDFGLARL 352 (468)
T ss_pred ceEEEEEecccCcHHHHhhh-cCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCce-EEEcccccccc
Confidence 9999999997 799999987 34566899999999999999999999999999999999999998865 99999999996
Q ss_pred cCCCCcccc-cccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCC
Q psy6391 166 FGVPVRIYT-HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 166 ~~~~~~~~~-~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
.++...... ..--...|.|||.+.... ++.+|||||+|++|++++| |+.||......+.++.+.++-.-|.++
T Consensus 353 ~~d~~Y~~~~~~kfPIkWtAPEa~~~~~-FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~---- 427 (468)
T KOG0197|consen 353 IGDDEYTASEGGKFPIKWTAPEALNYGK-FSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPE---- 427 (468)
T ss_pred cCCCceeecCCCCCCceecCHHHHhhCC-cccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCC----
Confidence 554322111 112246699999997655 9999999999999999999 999999999989988888766555544
Q ss_pred CCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 244 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
.+|+++.+++..||..+|++|||++.+..
T Consensus 428 ------------------------~CP~~vY~lM~~CW~~~P~~RPtF~~L~~ 456 (468)
T KOG0197|consen 428 ------------------------GCPDEVYELMKSCWHEDPEDRPTFETLRE 456 (468)
T ss_pred ------------------------CCCHHHHHHHHHHhhCCcccCCCHHHHHH
Confidence 46799999999999999999999997754
No 139
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3.3e-43 Score=296.60 Aligned_cols=255 Identities=27% Similarity=0.481 Sum_probs=209.2
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCC---CchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEG---IPATAIREISVLKELNHPNIVQLHDTMIENYRLYL 90 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 90 (313)
++|++.+.||+|++|.||.+.+..+++.+++|.+........ ....+.+|+.++++++||||+++++++.++...++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 468999999999999999999988899999999875432221 23567889999999999999999999999999999
Q ss_pred EEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 91 IFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 91 v~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
++|++++ +|.+.+... ..+++..+..++.|++.++.+||+.|++|+||+|+||+++.++. ++|+|||.+......
T Consensus 82 v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~-~~l~dfg~~~~~~~~ 157 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY---GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGN-VKLGDFGASKRLQTI 157 (263)
T ss_pred EEEECCCCcHHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC-EEEeecccceecccc
Confidence 9999975 777777653 34889999999999999999999999999999999999998877 999999998755322
Q ss_pred Cccc---ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 170 VRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 170 ~~~~---~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
.... ....++..|+|||.+.+.. .+.++|+||+|+++|++++|+.||...+..............+ ..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~---~~----- 228 (263)
T cd06625 158 CSSGTGMKSVTGTPYWMSPEVISGEG-YGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNP---QL----- 228 (263)
T ss_pred ccccccccCCCcCccccCcceeccCC-CCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCC---CC-----
Confidence 1111 2335678899999987654 8899999999999999999999998776655444433211110 00
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
+ ..++.++.++|.+||+.+|.+|||+.++++|+||
T Consensus 229 --------~-----------~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 229 --------P-----------SHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred --------C-----------ccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 0 2478999999999999999999999999999997
No 140
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.9e-43 Score=308.54 Aligned_cols=288 Identities=39% Similarity=0.660 Sum_probs=222.0
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC-----cE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN-----YR 87 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~ 87 (313)
.++|++.+.||+|++|.||+|.+..+++.|++|++..... ......+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH-QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 4789999999999999999999999999999999864322 22346678899999999999999999987644 35
Q ss_pred EEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 88 LYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 88 ~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
.++++|++++++.+.+.. ..+++..++.++.|++.||.+||+.|++|+||+|+||+++.++. ++|+|||++....
T Consensus 83 ~~lv~e~~~~~l~~~~~~----~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~-~kl~dfg~~~~~~ 157 (336)
T cd07849 83 VYIVQELMETDLYKLIKT----QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCD-LKICDFGLARIAD 157 (336)
T ss_pred EEEEehhcccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCC-EEECcccceeecc
Confidence 799999999988776643 35899999999999999999999999999999999999998877 9999999987653
Q ss_pred CCCc---ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCC
Q psy6391 168 VPVR---IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 244 (313)
Q Consensus 168 ~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
.... ......++..|+|||.+.+...++.++|+||+|+++|+|++|+.||...+.......+......+..+.+...
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (336)
T cd07849 158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCI 237 (336)
T ss_pred ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence 3211 1123457888999998766556889999999999999999999999887766666655555444433332221
Q ss_pred CCCC--CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCC
Q psy6391 245 SKLP--DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL 306 (313)
Q Consensus 245 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~ 306 (313)
.... .+....+...........+.+++++.++|.+||+.||++|||+.++++||||++-.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 238 ISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDP 301 (336)
T ss_pred hchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCC
Confidence 1100 0000011111111222335678999999999999999999999999999999886543
No 141
>KOG4717|consensus
Probab=100.00 E-value=1.8e-44 Score=308.39 Aligned_cols=262 Identities=31% Similarity=0.462 Sum_probs=231.8
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
+=|.+.+.||+|.|++|-++++--+|..||+|++.+.+.+......+.+|+..++.++|||||+++++...+..+|+|+|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 44788899999999999999999999999999999998887777899999999999999999999999999999999999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
.-++ +|++++-+... .+.++.+++.+.||+.|+.|+|+..+||+||||+||.+.+.-+.+||+|||++....++ ..
T Consensus 98 LGD~GDl~DyImKHe~--Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG-~k 174 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEE--GLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG-KK 174 (864)
T ss_pred ecCCchHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCc-ch
Confidence 9875 99999887544 48999999999999999999999999999999999988766666999999999887655 44
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
....+|+..|.|||.+.+..+..++.||||||++||-|.+|+.||+..++-+.+..++.-.
T Consensus 175 L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCK------------------- 235 (864)
T KOG4717|consen 175 LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCK------------------- 235 (864)
T ss_pred hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccc-------------------
Confidence 4667999999999999988888899999999999999999999999988877777775410
Q ss_pred cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCC
Q psy6391 253 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP 307 (313)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~ 307 (313)
-.....++.+..+||..||..||.+|.+++++.+|+|++.....+
T Consensus 236 ----------YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~ 280 (864)
T KOG4717|consen 236 ----------YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGL 280 (864)
T ss_pred ----------ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCCc
Confidence 001135889999999999999999999999999999999865443
No 142
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.6e-44 Score=314.52 Aligned_cols=250 Identities=29% Similarity=0.410 Sum_probs=202.5
Q ss_pred eccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhc---CCCCceeeceeEEeCcEEEEEEecccc
Q psy6391 22 IGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKEL---NHPNIVQLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 22 lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l---~~~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (313)
||+|+||+||+|++..+++.||+|++..... ..........|..++... +||+|+.+++.+...+..++||||+.+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 6999999999999999999999999865431 111123344566666655 699999999999999999999999975
Q ss_pred -CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccc
Q psy6391 98 -DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHE 176 (313)
Q Consensus 98 -~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~ 176 (313)
+|...+.. .+.+++..++.++.||+.||.|||++|++|+||||+|||++.++. ++|+|||++.............
T Consensus 81 g~L~~~l~~---~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~-~kl~Dfg~a~~~~~~~~~~~~~ 156 (330)
T cd05586 81 GELFWHLQK---EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGH-IALCDFGLSKANLTDNKTTNTF 156 (330)
T ss_pred ChHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCC-EEEecCCcCcCCCCCCCCccCc
Confidence 77666654 345899999999999999999999999999999999999998877 9999999987643333333445
Q ss_pred cccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCC
Q psy6391 177 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE 256 (313)
Q Consensus 177 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (313)
.|+..|+|||.+.+...++.++||||+|+++|+|++|..||...+.......+....... +.
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~------------------~~ 218 (330)
T cd05586 157 CGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRF------------------PK 218 (330)
T ss_pred cCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCC------------------CC
Confidence 789999999998765557899999999999999999999998877666555543221110 00
Q ss_pred CchhhhhhhccCCCHHHHHHHHHHhccCCCCCC----CHHHHhcCCCCCCC
Q psy6391 257 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI----NAENALKHKYFADK 303 (313)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp----s~~e~l~h~~~~~~ 303 (313)
..+++++.+||.+||+.||.+|| ++.++++||||++.
T Consensus 219 ----------~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 219 ----------NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred ----------ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence 13689999999999999999998 79999999999863
No 143
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.3e-43 Score=299.75 Aligned_cols=261 Identities=26% Similarity=0.455 Sum_probs=211.8
Q ss_pred ceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecc
Q psy6391 16 YEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFM 95 (313)
Q Consensus 16 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 95 (313)
|++.+.||.|++|.||++.+..++..+++|.+..... .....+.+|+.+++.++|+|++++++++..++..++|+||+
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~ 84 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSE--EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 84 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCH--HHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEec
Confidence 7889999999999999999998899999999864321 12356788999999999999999999999999999999999
Q ss_pred cc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccc
Q psy6391 96 SM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYT 174 (313)
Q Consensus 96 ~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~ 174 (313)
++ +|...+.. ...++++..+..++.||+.+|.+||+.|++|+||+|+||+++.++. ++|+|||++...........
T Consensus 85 ~~~~l~~~~~~--~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~-~kl~dfg~~~~~~~~~~~~~ 161 (282)
T cd06643 85 AGGAVDAVMLE--LERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGD-IKLADFGVSAKNTRTIQRRD 161 (282)
T ss_pred CCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCC-EEEccccccccccccccccc
Confidence 86 55555543 2345899999999999999999999999999999999999998876 99999999876543333333
Q ss_pred cccccccccchhhhcC----CCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCc
Q psy6391 175 HEVVTLWYRAPEVLLG----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY 250 (313)
Q Consensus 175 ~~~~~~~~~~PE~~~~----~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (313)
...++..|+|||.+.. ...++.++|+||+|+++|+|++|..||...+.......+..........
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------- 230 (282)
T cd06643 162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQ----------- 230 (282)
T ss_pred cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCC-----------
Confidence 4467889999998742 2346789999999999999999999998877655555543321110000
Q ss_pred cccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCC
Q psy6391 251 KTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP 307 (313)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~ 307 (313)
...++.++.+||.+||+.||.+||++.++++||||+.....|
T Consensus 231 ---------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~ 272 (282)
T cd06643 231 ---------------PSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSNKP 272 (282)
T ss_pred ---------------ccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccCCCC
Confidence 013678999999999999999999999999999999865543
No 144
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.1e-43 Score=308.53 Aligned_cols=274 Identities=26% Similarity=0.408 Sum_probs=205.2
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
..+|++++.||+|++|.||+|.+..++..|++|+... .....|+.+++.++|+||+++++++......++|+
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~--------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK--------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc--------cccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 3469999999999999999999998899999997532 23457999999999999999999999999999999
Q ss_pred eccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 93 EFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 93 e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
|++.++|.+.+.. ....+++..+..++.||+.||.|||++|++|+||||+|||++.++. ++|+|||.+...... ..
T Consensus 137 e~~~~~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~-~kl~DfG~a~~~~~~-~~ 212 (357)
T PHA03209 137 PHYSSDLYTYLTK--RSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQ-VCIGDLGAAQFPVVA-PA 212 (357)
T ss_pred EccCCcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC-EEEecCccccccccC-cc
Confidence 9999998888765 3446899999999999999999999999999999999999998877 999999998754322 12
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCC-CCCCh---------HHHHHHHHHhcCCCCCCCCC
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLF-QGDSE---------IDQLFRIFRVLTTPTEDNWP 242 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf-~~~~~---------~~~~~~~~~~~~~~~~~~~~ 242 (313)
.....|+..|+|||.+.+.. ++.++|+||||+++|+|+++..++ ..... ...+..+.......+. .++
T Consensus 213 ~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~ 290 (357)
T PHA03209 213 FLGLAGTVETNAPEVLARDK-YNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPE-EFP 290 (357)
T ss_pred cccccccccccCCeecCCCC-CCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChh-hcC
Confidence 23346889999999987644 889999999999999999865444 32211 1222222222222111 111
Q ss_pred CCCC--C-CCcc-----ccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 243 GVSK--L-PDYK-----TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 243 ~~~~--~-~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
.... + ..+. ...+.....+. ....++.++.+||.+||+.||++|||+.|+|+||||++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 291 RDPGSRLVRGFIEYASLERQPYTRYPCF--QRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred CCCccHHHHHHHhhcccCCCcccccHHH--hccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 0000 0 0000 00000000011 11257888999999999999999999999999999986
No 145
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3.3e-44 Score=311.86 Aligned_cols=249 Identities=25% Similarity=0.372 Sum_probs=203.0
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHH-HHhhcCCCCceeeceeEEeCcEEEEEEecccc
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREIS-VLKELNHPNIVQLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (313)
+.||+|++|.||++.+..+++.+++|++..... .......+..|.. +++.++||||+++++.+..++..++||||+.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 468999999999999999999999999875432 1122234455554 56778999999999999999999999999986
Q ss_pred -CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccc
Q psy6391 98 -DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHE 176 (313)
Q Consensus 98 -~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~ 176 (313)
+|...+.. ...+++..++.++.||+.||.|||+.|++|+||||+|||++.++. ++|+|||++.............
T Consensus 81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~-~kL~DfG~~~~~~~~~~~~~~~ 156 (325)
T cd05604 81 GELFFHLQR---ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGH-VVLTDFGLCKEGIAQSDTTTTF 156 (325)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCC-EEEeecCCcccCCCCCCCcccc
Confidence 67666553 445899999999999999999999999999999999999999887 9999999987543333333445
Q ss_pred cccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCC
Q psy6391 177 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE 256 (313)
Q Consensus 177 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (313)
.|+..|+|||.+.+.. ++.++||||||+++|+|++|..||...+.......+.......
T Consensus 157 ~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~-------------------- 215 (325)
T cd05604 157 CGTPEYLAPEVIRKQP-YDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVL-------------------- 215 (325)
T ss_pred cCChhhCCHHHHcCCC-CCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccC--------------------
Confidence 6899999999987644 7899999999999999999999999877766665554321100
Q ss_pred CchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCH----HHHhcCCCCCC
Q psy6391 257 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINA----ENALKHKYFAD 302 (313)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~----~e~l~h~~~~~ 302 (313)
.+.++.++.++|.+||+.||++||++ .++++||||+.
T Consensus 216 ---------~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~ 256 (325)
T cd05604 216 ---------RPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFES 256 (325)
T ss_pred ---------CCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCC
Confidence 02478999999999999999999976 59999999986
No 146
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=3.2e-43 Score=298.58 Aligned_cols=258 Identities=27% Similarity=0.416 Sum_probs=215.5
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
++|++.+.||.|++|.||++.+..+++.+++|.+..... ......+.+|+.+++.++|+|++++++++.++...++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA-EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME 79 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc-chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence 478999999999999999999998999999999876532 2223567889999999999999999999999999999999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
++++ +|.+.+... ++++..++.++.|++.++.+||+.+++|+||+|+||+++.++. ++|+|||.+.........
T Consensus 80 ~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~-~~l~d~g~~~~~~~~~~~ 154 (274)
T cd06609 80 YCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGD-VKLADFGVSGQLTSTMSK 154 (274)
T ss_pred eeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCC-EEEcccccceeecccccc
Confidence 9986 777776642 5899999999999999999999999999999999999999877 999999999877654333
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
.....++..|+|||.+.+.. ++.++|+||+|+++|++++|..||...+.......+.....+....
T Consensus 155 ~~~~~~~~~y~~PE~~~~~~-~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------------- 220 (274)
T cd06609 155 RNTFVGTPFWMAPEVIKQSG-YDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEG------------- 220 (274)
T ss_pred cccccCCccccChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcc-------------
Confidence 34456788899999987655 8999999999999999999999998776554443333221110000
Q ss_pred cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCC
Q psy6391 253 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 305 (313)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~ 305 (313)
..++.++.+++.+||..+|++||+++++++||||++...
T Consensus 221 --------------~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 259 (274)
T cd06609 221 --------------NKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKK 259 (274)
T ss_pred --------------cccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCc
Confidence 126789999999999999999999999999999998654
No 147
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=4.3e-43 Score=300.50 Aligned_cols=260 Identities=28% Similarity=0.453 Sum_probs=210.4
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
+.|++++.||.|++|.||+|.+..+++.+++|.+.... ......+.+|+.+++.++|+|++++++.+..++..++|||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 89 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE 89 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence 67999999999999999999999899999999986542 2224667889999999999999999999999999999999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
|+++ +|...+.. ....+++..+..++.||+.++.+||+.|++|+||+|+||+++.++. ++|+|||.+.........
T Consensus 90 ~~~~~~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~-~kl~dfg~~~~~~~~~~~ 166 (292)
T cd06644 90 FCPGGAVDAIMLE--LDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGD-IKLADFGVSAKNVKTLQR 166 (292)
T ss_pred cCCCCcHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCC-EEEccCccceeccccccc
Confidence 9987 55555543 2335899999999999999999999999999999999999988776 999999988664433332
Q ss_pred cccccccccccchhhhcC----CCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy6391 173 YTHEVVTLWYRAPEVLLG----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 248 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~----~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
.....++..|+|||.+.+ ...++.++|+||||+++|+|++|..||..........+......+...
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------- 236 (292)
T cd06644 167 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLS---------- 236 (292)
T ss_pred cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCC----------
Confidence 334457888999998742 234678999999999999999999999877655444443321110000
Q ss_pred CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCC
Q psy6391 249 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 304 (313)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~ 304 (313)
....++.++.++|.+||+.||++||++.++++||||+...
T Consensus 237 ----------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 276 (292)
T cd06644 237 ----------------QPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVT 276 (292)
T ss_pred ----------------CCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 0024678999999999999999999999999999998743
No 148
>KOG0604|consensus
Probab=100.00 E-value=6.1e-45 Score=292.15 Aligned_cols=263 Identities=28% Similarity=0.391 Sum_probs=218.2
Q ss_pred hhccceee-eeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEe----C
Q psy6391 12 RLEDYEKV-EKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIE----N 85 (313)
Q Consensus 12 ~~~~y~~~-~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~ 85 (313)
.+++|.+- +.||-|-.|.|-.+.++.+++.+|+|++... .+..+|++..... .|||||.++++|+. .
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-------PKARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 56778776 5699999999999999999999999998542 4566888877666 69999999999873 3
Q ss_pred cEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCC--CeEEEecCCC
Q psy6391 86 YRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKS--NIVKVADFGL 162 (313)
Q Consensus 86 ~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~--~~~~l~df~~ 162 (313)
..+.+|||.++| .|.+.++.. .++.+++.++.++.+||..|+.|||+.+|+|+||||+|+|+...+ -.+||+|||+
T Consensus 132 kcLLiVmE~meGGeLfsriq~~-g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDR-GDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred eeeEeeeecccchHHHHHHHHc-ccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccc
Confidence 578899999986 666666653 345699999999999999999999999999999999999996554 3499999999
Q ss_pred ccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHHhcCCCCC
Q psy6391 163 ARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE----IDQLFRIFRVLTTPTE 238 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~----~~~~~~~~~~~~~~~~ 238 (313)
++....+ ......+.|+.|.|||++... .++...|+||+|++||-|++|.+||.+... ..+..++.......+.
T Consensus 211 AK~t~~~-~~L~TPc~TPyYvaPevlg~e-KydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~ 288 (400)
T KOG0604|consen 211 AKETQEP-GDLMTPCFTPYYVAPEVLGPE-KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPE 288 (400)
T ss_pred ccccCCC-ccccCCcccccccCHHHhCch-hcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCC
Confidence 9876543 334556789999999988654 499999999999999999999999987643 3456666655555444
Q ss_pred CCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCCCc
Q psy6391 239 DNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF 309 (313)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~~~ 309 (313)
+.| ..+|++.+++|+.+|..+|++|.|+.++++|||+++....|.-
T Consensus 289 pEW-------------------------s~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~t 334 (400)
T KOG0604|consen 289 PEW-------------------------SCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQT 334 (400)
T ss_pred hhH-------------------------hHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCCC
Confidence 444 4588999999999999999999999999999999998777653
No 149
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.9e-43 Score=320.13 Aligned_cols=258 Identities=26% Similarity=0.357 Sum_probs=213.2
Q ss_pred hccceeeeeeccccceEEEEEEeCcC-CcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVT-GALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~-~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
...|.+.+.||+|++|.||.+....+ +..+++|.+..... .....+.+|+.+++.++||||+++++++..++..++|
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~--~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv 143 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDE--RQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI 143 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCH--HHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEE
Confidence 34499999999999999999998777 77888887654322 2234567899999999999999999999999999999
Q ss_pred Eecccc-CHHHHHhh-CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 92 FEFMSM-DLKKYIDT-VPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 92 ~e~~~~-~l~~~~~~-~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
|||+.+ +|.+.+.. .....++++..+..++.||+.||.|||+.|++|+||||+|||++.++. ++|+|||++......
T Consensus 144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~-~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGI-IKLGDFGFSKQYSDS 222 (478)
T ss_pred EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCc-EEEEeCcCceecCCc
Confidence 999975 88777653 234456899999999999999999999999999999999999998876 999999999865432
Q ss_pred Cc--ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCC
Q psy6391 170 VR--IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 247 (313)
Q Consensus 170 ~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
.. ......||..|+|||.+.+. .++.++||||||+++|+|++|+.||...........+......+.+
T Consensus 223 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~--------- 292 (478)
T PTZ00267 223 VSLDVASSFCGTPYYLAPELWERK-RYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFP--------- 292 (478)
T ss_pred cccccccccCCCccccCHhHhCCC-CCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC---------
Confidence 21 22334689999999988764 4899999999999999999999999988776666665542221111
Q ss_pred CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 248 PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
..++.++.++|.+||+.||++||++.+++.|+|++.
T Consensus 293 -------------------~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 293 -------------------CPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred -------------------ccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 247789999999999999999999999999999864
No 150
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.7e-43 Score=312.64 Aligned_cols=276 Identities=24% Similarity=0.332 Sum_probs=207.7
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
...|.+.+.||+|++|.||++.+..+++.|++|... ...+.+|+.++++++|+||+++++++..++..++||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~--------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~ 239 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW--------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL 239 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc--------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 447999999999999999999999999999999532 234678999999999999999999999999999999
Q ss_pred eccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc-
Q psy6391 93 EFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR- 171 (313)
Q Consensus 93 e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~- 171 (313)
+++.++|...+... ...+++.+++.++.||+.||.|||++||+|+||||+|||++.++. ++|+|||++........
T Consensus 240 e~~~~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~-vkL~DFGla~~~~~~~~~ 316 (461)
T PHA03211 240 PKYRSDLYTYLGAR--LRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPED-ICLGDFGAACFARGSWST 316 (461)
T ss_pred EccCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCC-EEEcccCCceeccccccc
Confidence 99999988887652 335899999999999999999999999999999999999998877 99999999876533211
Q ss_pred -ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHHHhcCCCCCCCCCC
Q psy6391 172 -IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS-------EIDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 172 -~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
......||..|+|||++.+.. ++.++|||||||++|+|++|..++-... ....+.++......... .++.
T Consensus 317 ~~~~~~~GT~~Y~APE~~~~~~-~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~-~~~~ 394 (461)
T PHA03211 317 PFHYGIAGTVDTNAPEVLAGDP-YTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVD-EFPQ 394 (461)
T ss_pred ccccccCCCcCCcCHHHHcCCC-CCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccc-cCCC
Confidence 122346899999999987644 8999999999999999999876543211 12333333332222111 1110
Q ss_pred CCC--C-CC-----ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 244 VSK--L-PD-----YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 244 ~~~--~-~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
... + .. .....+.+....+. .+..++.++.+||.+||+.||++|||+.|+|+||||++
T Consensus 395 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 395 HAGSRLVSQYRHRAARNRRPAYTRPAWT-RYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred CcchHHHHHHHhhhhcccCCccCCcchh-hhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 000 0 00 00001111111111 12346789999999999999999999999999999975
No 151
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=9.4e-43 Score=292.58 Aligned_cols=255 Identities=29% Similarity=0.485 Sum_probs=214.7
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEec
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
+|++.+.||+|++|.||.+.+..+++.+++|.+............+.+|+.+++.++|++++++++.+..++..++|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 58999999999999999999998999999999876554444456788999999999999999999999999999999999
Q ss_pred ccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccc
Q psy6391 95 MSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIY 173 (313)
Q Consensus 95 ~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~ 173 (313)
+++ +|.+.+.... ...+++..+..++.+++.++.+||++|++|+||+|+||+++.++..++|+|||.+........ .
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~-~ 158 (256)
T cd08220 81 APGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK-A 158 (256)
T ss_pred CCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc-c
Confidence 976 8888886532 345899999999999999999999999999999999999987776689999999987654322 2
Q ss_pred ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcccc
Q psy6391 174 THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT 253 (313)
Q Consensus 174 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (313)
....++..|+|||.+... ..+.++|+||+|++++++++|+.||...+.......+......+..
T Consensus 159 ~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 222 (256)
T cd08220 159 YTVVGTPCYISPELCEGK-PYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPIS--------------- 222 (256)
T ss_pred cccccCCcccCchhccCC-CCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCC---------------
Confidence 234678889999988654 4788999999999999999999999887666555554432211111
Q ss_pred CCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 254 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
..++.++.+++.+||+.||.+|||+.++++||||
T Consensus 223 -------------~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 223 -------------DRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred -------------CCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 2467899999999999999999999999999997
No 152
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.2e-43 Score=306.49 Aligned_cols=262 Identities=25% Similarity=0.360 Sum_probs=211.4
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccC-CCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEN-DDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
++|++.+.||+|+||.||++.++.+++.+++|++.+.. ........+.+|+.++..++|++|+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47999999999999999999999899999999986532 12222345778999999999999999999999999999999
Q ss_pred eccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCC-
Q psy6391 93 EFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV- 170 (313)
Q Consensus 93 e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~- 170 (313)
||+. |+|.+++... ...+++..++.++.||+.||.|||+.|++|+||||+|||++.++. ++|+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~-~kL~DfG~a~~~~~~~~ 157 (332)
T cd05623 81 DYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGH-IRLADFGSCLKLMEDGT 157 (332)
T ss_pred eccCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCC-EEEeecchheecccCCc
Confidence 9997 5888888652 335899999999999999999999999999999999999998877 9999999986543221
Q ss_pred cccccccccccccchhhhcC----CCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 171 RIYTHEVVTLWYRAPEVLLG----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 171 ~~~~~~~~~~~~~~PE~~~~----~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
.......|+..|+|||++.. ...++.++|+||||+++|+|++|+.||...+.......+........
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~--------- 228 (332)
T cd05623 158 VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ--------- 228 (332)
T ss_pred ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCcccc---------
Confidence 12233468999999999852 33578899999999999999999999998877666666543211100
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCC--CCCHHHHhcCCCCCC
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPAT--RINAENALKHKYFAD 302 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~--Rps~~e~l~h~~~~~ 302 (313)
++ .....+++++.+||++|+..++.+ |+++.++++||||++
T Consensus 229 -------~p--------~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~ 271 (332)
T cd05623 229 -------FP--------AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTG 271 (332)
T ss_pred -------CC--------CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCC
Confidence 00 011347899999999999765554 789999999999986
No 153
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=3e-43 Score=309.21 Aligned_cols=284 Identities=35% Similarity=0.587 Sum_probs=218.7
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC-----
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN----- 85 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 85 (313)
...++|++.+.||+|++|.||++.+..+++.|++|++............+.+|+.+++.++|+||+++++++...
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 356889999999999999999999999999999999875544444445677899999999999999999988643
Q ss_pred -cEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcc
Q psy6391 86 -YRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLAR 164 (313)
Q Consensus 86 -~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~ 164 (313)
...++||||+.++|.+.+... ++...+..++.||+.||.+||+.|++|+||||+||+++.++. ++|+|||.+.
T Consensus 93 ~~~~~lv~e~~~~~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~-~kL~Dfg~~~ 166 (353)
T cd07850 93 FQDVYLVMELMDANLCQVIQMD-----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-LKILDFGLAR 166 (353)
T ss_pred cCcEEEEEeccCCCHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCC-EEEccCccce
Confidence 357999999999888877531 788999999999999999999999999999999999999887 9999999998
Q ss_pred ccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCC
Q psy6391 165 AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 244 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
....... .....++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...+.......+....+.+........
T Consensus 167 ~~~~~~~-~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T cd07850 167 TAGTSFM-MTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRL 244 (353)
T ss_pred eCCCCCC-CCCCcccccccCHHHHhCC-CCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence 7654322 2334578889999998764 4889999999999999999999999988777666666655444432211110
Q ss_pred CCC--------CC-----ccccCCCCc-hhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 245 SKL--------PD-----YKTTFPEWS-NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 245 ~~~--------~~-----~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
... +. +...++... ...........++.+.++|.+||+.||++|||+.|+|.||||+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 245 QPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred hhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence 000 00 000000000 00000001235678999999999999999999999999999975
No 154
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.8e-43 Score=307.22 Aligned_cols=249 Identities=24% Similarity=0.371 Sum_probs=202.3
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHH-HHHhhcCCCCceeeceeEEeCcEEEEEEecccc
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREI-SVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (313)
+.||+|+||.||++.+..+++.||+|++...... ......+..|. .+++.++|+||+++++++..++..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 4699999999999999989999999998754321 11123344444 356778999999999999999999999999986
Q ss_pred -CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccc
Q psy6391 98 -DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHE 176 (313)
Q Consensus 98 -~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~ 176 (313)
+|...+.. ...+++..++.++.||+.||.|||+.|++|+||||+|||++.++. ++|+|||++.............
T Consensus 81 ~~L~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~-~kl~DfG~a~~~~~~~~~~~~~ 156 (325)
T cd05602 81 GELFYHLQR---ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGH-IVLTDFGLCKENIEHNGTTSTF 156 (325)
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCC-EEEccCCCCcccccCCCCcccc
Confidence 77776654 345888999999999999999999999999999999999998877 9999999987543332333445
Q ss_pred cccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCC
Q psy6391 177 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE 256 (313)
Q Consensus 177 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (313)
.|+..|+|||.+.+. .++.++||||||+++|+|++|..||...+.......+.......
T Consensus 157 ~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~-------------------- 215 (325)
T cd05602 157 CGTPEYLAPEVLHKQ-PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL-------------------- 215 (325)
T ss_pred cCCccccCHHHHcCC-CCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCC--------------------
Confidence 689999999998764 48899999999999999999999999877766666554321100
Q ss_pred CchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHH----HHhcCCCCCC
Q psy6391 257 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAE----NALKHKYFAD 302 (313)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~----e~l~h~~~~~ 302 (313)
.+.+++++.++|.+||+.||.+||++. ++++|+||..
T Consensus 216 ---------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~ 256 (325)
T cd05602 216 ---------KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSP 256 (325)
T ss_pred ---------CCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCC
Confidence 024789999999999999999999876 8999999965
No 155
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.8e-43 Score=306.78 Aligned_cols=249 Identities=26% Similarity=0.388 Sum_probs=201.6
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHH-HHHhhcCCCCceeeceeEEeCcEEEEEEecccc
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREI-SVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (313)
+.||+|++|.||++.+..+++.|++|++..... .......+..|. .+++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 468999999999999999999999999875432 111123444554 467888999999999999999999999999986
Q ss_pred -CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccc
Q psy6391 98 -DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHE 176 (313)
Q Consensus 98 -~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~ 176 (313)
+|...+.. ...+++..++.++.||+.||.|||+.|++|+||||+||+++.++. ++|+|||++.............
T Consensus 81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~-~kl~Dfg~~~~~~~~~~~~~~~ 156 (321)
T cd05603 81 GELFFHLQR---ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGH-VVLTDFGLCKEGVEPEETTSTF 156 (321)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCC-EEEccCCCCccCCCCCCccccc
Confidence 77666653 345889999999999999999999999999999999999999877 9999999987543333333445
Q ss_pred cccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCC
Q psy6391 177 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE 256 (313)
Q Consensus 177 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (313)
.|+..|+|||.+.+. .++.++|+||||+++|+|++|..||...+.......+....... +
T Consensus 157 ~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~------------------~- 216 (321)
T cd05603 157 CGTPEYLAPEVLRKE-PYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQL------------------P- 216 (321)
T ss_pred cCCcccCCHHHhcCC-CCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCC------------------C-
Confidence 688999999998654 47899999999999999999999999887666655554321100 0
Q ss_pred CchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCH----HHHhcCCCCCC
Q psy6391 257 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINA----ENALKHKYFAD 302 (313)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~----~e~l~h~~~~~ 302 (313)
+..+.++.++|.+||+.||.+||++ .++++|+||..
T Consensus 217 ----------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~ 256 (321)
T cd05603 217 ----------GGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSP 256 (321)
T ss_pred ----------CCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCC
Confidence 2467899999999999999999875 59999999975
No 156
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=3.7e-43 Score=305.41 Aligned_cols=251 Identities=25% Similarity=0.389 Sum_probs=201.2
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcEEEEEEecccc
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKEL-NHPNIVQLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (313)
+.||+|++|.||++.+..+++.||+|+++..... ......+.+|+.++.++ +|++|+.+++++.+.+.+++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999999999999999999865322 22235577899998888 699999999999999999999999975
Q ss_pred -CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccc
Q psy6391 98 -DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHE 176 (313)
Q Consensus 98 -~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~ 176 (313)
+|...+.. .+.+++..++.++.||+.||.|||++|++|+||||+|||++.++. ++|+|||++.............
T Consensus 81 ~~L~~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~-~kl~Dfg~~~~~~~~~~~~~~~ 156 (327)
T cd05617 81 GDLMFHMQR---QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGH-IKLTDYGMCKEGLGPGDTTSTF 156 (327)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCC-EEEeccccceeccCCCCceecc
Confidence 77666654 345999999999999999999999999999999999999999877 9999999987533222233445
Q ss_pred cccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHhcCCCCCCCCCCCCCCCCc
Q psy6391 177 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS------EIDQLFRIFRVLTTPTEDNWPGVSKLPDY 250 (313)
Q Consensus 177 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (313)
.|+..|+|||.+.+. .++.++|+||||+++|+|++|..||.... ......+.......
T Consensus 157 ~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--------------- 220 (327)
T cd05617 157 CGTPNYIAPEILRGE-EYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI--------------- 220 (327)
T ss_pred cCCcccCCHHHHCCC-CCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC---------------
Confidence 789999999998764 47899999999999999999999996321 11222222211000
Q ss_pred cccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC------HHHHhcCCCCCCC
Q psy6391 251 KTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN------AENALKHKYFADK 303 (313)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps------~~e~l~h~~~~~~ 303 (313)
.++ ..++..+.++|.+||+.||.+|++ +.++++||||++.
T Consensus 221 --~~p-----------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 221 --RIP-----------RFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred --CCC-----------CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 001 237789999999999999999998 5799999999873
No 157
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=5.3e-43 Score=304.58 Aligned_cols=285 Identities=22% Similarity=0.278 Sum_probs=207.9
Q ss_pred eeeeeccc--cceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecc
Q psy6391 18 KVEKIGEG--TYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFM 95 (313)
Q Consensus 18 ~~~~lg~g--~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 95 (313)
+++.||+| ++++||++.++.+|+.||+|++............+.+|+.+++.++||||+++++++..++..++|+||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 56789999 6789999999999999999999766544444567788999999999999999999999999999999999
Q ss_pred cc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC---C-
Q psy6391 96 SM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP---V- 170 (313)
Q Consensus 96 ~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~---~- 170 (313)
++ +|.+++.... ...+++..++.++.||+.||.|||++|++|+||||+||+++.++. ++++||+.+...... .
T Consensus 82 ~~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~-~~l~~~~~~~~~~~~~~~~~ 159 (327)
T cd08227 82 AYGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGK-VYLSGLRSNLSMINHGQRLR 159 (327)
T ss_pred CCCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCc-EEEcccchhhcccccccccc
Confidence 85 7877775432 234899999999999999999999999999999999999998876 899999765432111 0
Q ss_pred ---cccccccccccccchhhhcCC-CCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCC-------
Q psy6391 171 ---RIYTHEVVTLWYRAPEVLLGS-QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED------- 239 (313)
Q Consensus 171 ---~~~~~~~~~~~~~~PE~~~~~-~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~------- 239 (313)
.......++..|+|||++.+. ..++.++||||+|+++|++++|..||.................+....
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (327)
T cd08227 160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAE 239 (327)
T ss_pred ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhh
Confidence 011223456779999998653 347899999999999999999999998665544333332211110000
Q ss_pred CCCCCCCCCCccccC----------CCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCC
Q psy6391 240 NWPGVSKLPDYKTTF----------PEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 304 (313)
Q Consensus 240 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~ 304 (313)
............... +.............+++++.+||.+||+.||.+|||++++++||||++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~ 314 (327)
T cd08227 240 ELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 314 (327)
T ss_pred hcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence 000000000000000 00000000111234678999999999999999999999999999998754
No 158
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=8.9e-43 Score=298.26 Aligned_cols=254 Identities=25% Similarity=0.422 Sum_probs=214.1
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
++|++.+.||+|++|.||.+.+..+++.+++|++..... .......+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 479999999999999999999998999999999875432 2223467888999999999999999999999999999999
Q ss_pred eccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 93 EFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 93 e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
||++ ++|.+.+... ..+++..+..++.||+.+|.+||+.|++|+||+|+||+++.++. ++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~-~kl~dfg~~~~~~~~-- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS---GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGY-IKITDFGFAKRVKGR-- 154 (290)
T ss_pred ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCC-EEEeeCCCccccCCC--
Confidence 9995 5888887653 45899999999999999999999999999999999999998877 999999998776443
Q ss_pred ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcc
Q psy6391 172 IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK 251 (313)
Q Consensus 172 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (313)
.....++..|+|||.+.+. ..+.++|+||||+++|+|++|..||...........+..... +.
T Consensus 155 -~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~-------------- 217 (290)
T cd05580 155 -TYTLCGTPEYLAPEIILSK-GYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKV-RF-------------- 217 (290)
T ss_pred -CCCCCCCccccChhhhcCC-CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc-cC--------------
Confidence 2334678889999988654 478999999999999999999999988776555555432110 00
Q ss_pred ccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCC-----CHHHHhcCCCCCCCC
Q psy6391 252 TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADKT 304 (313)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~e~l~h~~~~~~~ 304 (313)
+ ..++..+.++|.+||..||.+|+ +++|+++||||+...
T Consensus 218 ---~-----------~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 261 (290)
T cd05580 218 ---P-----------SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID 261 (290)
T ss_pred ---C-----------ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence 0 13679999999999999999999 999999999998743
No 159
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=3.2e-43 Score=307.86 Aligned_cols=288 Identities=35% Similarity=0.603 Sum_probs=225.1
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcE---
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYR--- 87 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--- 87 (313)
..-++|++.+.||+|++|.||+|.+..+++.|++|++............+.+|+.+++.++|+|++++++++...+.
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 45678999999999999999999999899999999987544333334667789999999999999999998876554
Q ss_pred ---EEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcc
Q psy6391 88 ---LYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLAR 164 (313)
Q Consensus 88 ---~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~ 164 (313)
.++|+|+++++|.+++.. .++++..++.++.||+.+|.+||+.|++|+||+|+||+++.++. ++|+|||.+.
T Consensus 92 ~~~~~lv~e~~~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~-~kL~dfg~~~ 166 (343)
T cd07851 92 FQDVYLVTHLMGADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE-LKILDFGLAR 166 (343)
T ss_pred cccEEEEEecCCCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCC-EEEccccccc
Confidence 899999998898888764 35899999999999999999999999999999999999998877 9999999997
Q ss_pred ccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCC
Q psy6391 165 AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 244 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
..... .....++..|+|||.+.+....+.++|+||||+++|++++|+.||...........+......+.+..+...
T Consensus 167 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (343)
T cd07851 167 HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKI 243 (343)
T ss_pred ccccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Confidence 66433 233456788999999866546789999999999999999999999988777777666665444433222211
Q ss_pred CCC--CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCC
Q psy6391 245 SKL--PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL 306 (313)
Q Consensus 245 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~ 306 (313)
..- ..+....+.............+++++.+||.+||+.||.+|||+.++++||||.+....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~ 307 (343)
T cd07851 244 SSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDP 307 (343)
T ss_pred cchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCC
Confidence 100 00000000000111112224578999999999999999999999999999999985444
No 160
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.2e-42 Score=290.50 Aligned_cols=255 Identities=25% Similarity=0.459 Sum_probs=217.0
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEec
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
+|++.+.||.|++|.||.+++..+++.+++|.+............+.+|+.++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 58999999999999999999999999999999876654444456788999999999999999999999999999999999
Q ss_pred ccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccc
Q psy6391 95 MSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIY 173 (313)
Q Consensus 95 ~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~ 173 (313)
+++ +|.+.+.... ...+++..+..++.|++.++.+||+.|++|+||+|+||+++.++. ++|+|||.+..........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~-~kl~d~~~~~~~~~~~~~~ 158 (256)
T cd08221 81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGL-IKLGDFGISKILGSEYSMA 158 (256)
T ss_pred cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCC-EEECcCcceEEcccccccc
Confidence 975 8888876542 345899999999999999999999999999999999999998877 9999999987764443333
Q ss_pred ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcccc
Q psy6391 174 THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT 253 (313)
Q Consensus 174 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (313)
....++..|+|||.+.+.. .+.++|+||+|+++++|++|..||......+....+......+..
T Consensus 159 ~~~~~~~~y~ape~~~~~~-~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 222 (256)
T cd08221 159 ETVVGTPYYMSPELCQGVK-YNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVV--------------- 222 (256)
T ss_pred cccCCCccccCHhhcCCCC-CCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCc---------------
Confidence 4456789999999887644 788999999999999999999999887776666665432111110
Q ss_pred CCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 254 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
..++.++.++|.+||+.+|.+||++.++++|+|+
T Consensus 223 -------------~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 223 -------------SVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred -------------cccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 2478999999999999999999999999999996
No 161
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=5.5e-43 Score=298.73 Aligned_cols=259 Identities=24% Similarity=0.366 Sum_probs=207.3
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCC-CCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDE-GIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
.|++.+.||+|++|.||.+.+..+++.|++|.+....... .....+.+|+.+++.++|++++.+++.+.+.+..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 4788899999999999999999999999999987543222 122456789999999999999999999999999999999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
|+.+ +|.+.+.... ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||++....... .
T Consensus 81 ~~~g~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~-~~l~Dfg~~~~~~~~~-~ 157 (285)
T cd05630 81 LMNGGDLKFHIYHMG-EAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGH-IRISDLGLAVHVPEGQ-T 157 (285)
T ss_pred ecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCC-EEEeeccceeecCCCc-c
Confidence 9975 7877765432 335899999999999999999999999999999999999998877 9999999987653322 2
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
.....|+..|+|||.+.+.. ++.++|+||+|+++|+|++|..||.....................
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~-------------- 222 (285)
T cd05630 158 IKGRVGTVGYMAPEVVKNER-YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQE-------------- 222 (285)
T ss_pred ccCCCCCccccChHHHcCCC-CCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhh--------------
Confidence 23346889999999987644 889999999999999999999999865432111111110000000
Q ss_pred cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC-----HHHHhcCCCCCC
Q psy6391 253 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN-----AENALKHKYFAD 302 (313)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~e~l~h~~~~~ 302 (313)
.....+++++.+|+.+||+.||.+||| +.|+++||||++
T Consensus 223 -----------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~ 266 (285)
T cd05630 223 -----------EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ 266 (285)
T ss_pred -----------hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence 001247789999999999999999999 999999999987
No 162
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.2e-42 Score=292.14 Aligned_cols=256 Identities=30% Similarity=0.530 Sum_probs=213.9
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEec
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
+|++.+.||.|++|.||++.++.++..+++|.+............+.+|+.+++.++|+|++++++.+.+++..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 58899999999999999999998999999999876544333456788999999999999999999999999999999999
Q ss_pred ccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccc
Q psy6391 95 MSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIY 173 (313)
Q Consensus 95 ~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~ 173 (313)
+.+ +|.+.+.... ...+++..+..++.|++.++.|||+.+++|+||+|+||+++.++..++|+|||.+..........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (257)
T cd08225 81 CDGGDLMKRINRQR-GVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA 159 (257)
T ss_pred CCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccc
Confidence 975 8888776532 23478999999999999999999999999999999999999887668999999987765443333
Q ss_pred ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcccc
Q psy6391 174 THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT 253 (313)
Q Consensus 174 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (313)
....|+..|+|||.+.+. .++.++|+||+|++++++++|..||...+..............+.
T Consensus 160 ~~~~~~~~~~ape~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---------------- 222 (257)
T cd08225 160 YTCVGTPYYLSPEICQNR-PYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPI---------------- 222 (257)
T ss_pred cccCCCccccCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCC----------------
Confidence 344678889999988654 488999999999999999999999987766555444332111000
Q ss_pred CCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 254 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
.+.++.++.++|.+|+..+|++|||+.+++.||||
T Consensus 223 ------------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 223 ------------SPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred ------------CCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 12477899999999999999999999999999997
No 163
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=7.3e-43 Score=293.26 Aligned_cols=253 Identities=29% Similarity=0.513 Sum_probs=210.5
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
++|++.+.||.|++|.||++.+..+++.+++|.+..... ...+.+|+.+++.++|+|++++++++.++...++++|
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e 78 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED----LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME 78 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH----HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence 579999999999999999999998889999999875432 4788899999999999999999999999999999999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
++++ +|.+.+... ...+++..++.++.|++.++.+||+.|++|+||+|+||+++.++. ++|+|||.+.........
T Consensus 79 ~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~-~~l~dfg~~~~~~~~~~~ 155 (256)
T cd06612 79 YCGAGSVSDIMKIT--NKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQ-AKLADFGVSGQLTDTMAK 155 (256)
T ss_pred cCCCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCc-EEEcccccchhcccCccc
Confidence 9986 787877652 345899999999999999999999999999999999999998877 999999999876554433
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
.....++..|+|||.+.+. ..+.++|+||+|+++++|++|..||................ ...+.
T Consensus 156 ~~~~~~~~~y~~PE~~~~~-~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~----~~~~~---------- 220 (256)
T cd06612 156 RNTVIGTPFWMAPEVIQEI-GYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKP----PPTLS---------- 220 (256)
T ss_pred cccccCCccccCHHHHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCC----CCCCC----------
Confidence 3445578889999988664 47899999999999999999999998765543322221100 00000
Q ss_pred cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 253 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
....++.++.++|.+||+.||++|||+.++|.||||
T Consensus 221 ------------~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 221 ------------DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred ------------chhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 002367899999999999999999999999999997
No 164
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1e-42 Score=301.41 Aligned_cols=265 Identities=24% Similarity=0.416 Sum_probs=216.6
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCC-CCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDE-GIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
++|++.+.||+|++|.||.+.+..+++.+++|.+....... .....+.+|+.+++.++|++|+++++.+.++...++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 47999999999999999999999889999999997654332 23456888999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
||+.+ +|.+++... ....+++..++.++.||+.+|.|||+.|++|+||||+||+++.++. ++|+|||++........
T Consensus 81 e~~~~~~L~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~-~~l~dfg~~~~~~~~~~ 158 (316)
T cd05574 81 DYCPGGELFRLLQRQ-PGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGH-IMLSDFDLSKQSDVEPP 158 (316)
T ss_pred EecCCCCHHHHHHhC-CCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCC-EEEeecchhhccccccc
Confidence 99976 888877643 3456899999999999999999999999999999999999998877 99999998865432211
Q ss_pred -----------------------------ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCCh
Q psy6391 172 -----------------------------IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE 222 (313)
Q Consensus 172 -----------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~ 222 (313)
......|+..|+|||.+.+.. .+.++||||||+++|++++|..||...+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 159 PVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDG-HGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred ccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCC-CCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 011235678899999987644 78999999999999999999999988777
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC----HHHHhcCC
Q psy6391 223 IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN----AENALKHK 298 (313)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~e~l~h~ 298 (313)
......+...... ++. ...++.++.++|.+||..||++||+ +.++|.||
T Consensus 238 ~~~~~~~~~~~~~-----~~~----------------------~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~ 290 (316)
T cd05574 238 DETFSNILKKEVT-----FPG----------------------SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHP 290 (316)
T ss_pred HHHHHHHhcCCcc-----CCC----------------------ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCc
Confidence 6655554421110 000 0136899999999999999999999 99999999
Q ss_pred CCCCCCCCCCc
Q psy6391 299 YFADKTDLPKF 309 (313)
Q Consensus 299 ~~~~~~~~~~~ 309 (313)
||++. ++|..
T Consensus 291 ~~~~~-~~~~~ 300 (316)
T cd05574 291 FFRGV-NWALI 300 (316)
T ss_pred hhhcC-Chhhc
Confidence 99984 35443
No 165
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.1e-42 Score=296.88 Aligned_cols=260 Identities=23% Similarity=0.378 Sum_probs=211.3
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
.|+..+.||+|+||.||.+.+..+++.+|+|.+...... ......+.+|+.+++.++|++++.+.+.+..++..+++||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 478889999999999999999999999999998754322 2223456789999999999999999999999999999999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
|+.+ +|.+.+... ....+++..+..++.|++.+|.|||+.|++|+||+|+||+++.++. ++|+|||++....... .
T Consensus 81 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~-~kl~Dfg~~~~~~~~~-~ 157 (285)
T cd05632 81 IMNGGDLKFHIYNM-GNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGH-IRISDLGLAVKIPEGE-S 157 (285)
T ss_pred eccCccHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCC-EEEecCCcceecCCCC-c
Confidence 9986 676666542 2345899999999999999999999999999999999999998876 9999999886653322 2
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
.....|+..|+|||.+.+. .++.++|+||+|+++|++++|..||...........+.......... +
T Consensus 158 ~~~~~g~~~~~aPE~~~~~-~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~-~----------- 224 (285)
T cd05632 158 IRGRVGTVGYMAPEVLNNQ-RYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEV-Y----------- 224 (285)
T ss_pred ccCCCCCcCccChHHhcCC-CCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccc-c-----------
Confidence 2344688999999998664 48899999999999999999999998776554444433321111110 0
Q ss_pred cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC-----HHHHhcCCCCCCC
Q psy6391 253 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN-----AENALKHKYFADK 303 (313)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~e~l~h~~~~~~ 303 (313)
...++.++.+|+.+||+.||.+||+ +.+++.|+||++.
T Consensus 225 -------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 225 -------------SAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred -------------CccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 1247789999999999999999999 8999999999874
No 166
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4.5e-43 Score=298.42 Aligned_cols=258 Identities=22% Similarity=0.391 Sum_probs=204.6
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
++|++++.||.|++|.||++.+..+++.|++|++..... ......+.+|+.++++++||||+++++++..++..++|+|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT-VELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE 79 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC-hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence 478999999999999999999988999999999865432 2223568899999999999999999999999999999999
Q ss_pred ccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccc
Q psy6391 94 FMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIY 173 (313)
Q Consensus 94 ~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~ 173 (313)
|++++..+... .+++..+..++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||++....... .
T Consensus 80 ~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~-~~l~dfg~~~~~~~~~--~ 150 (279)
T cd06619 80 FMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQ-VKLCDFGVSTQLVNSI--A 150 (279)
T ss_pred cCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCC-EEEeeCCcceeccccc--c
Confidence 99974333322 3688899999999999999999999999999999999999877 9999999987654322 2
Q ss_pred ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHhcCCCCCCCCCCCCCCCCc
Q psy6391 174 THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQ---LFRIFRVLTTPTEDNWPGVSKLPDY 250 (313)
Q Consensus 174 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (313)
....++..|+|||.+.+. .++.++|+||+|+++|++++|..||........ ................
T Consensus 151 ~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 220 (279)
T cd06619 151 KTYVGTNAYMAPERISGE-QYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVL--------- 220 (279)
T ss_pred cCCCCChhhcCceeecCC-CCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCC---------
Confidence 345678899999988764 488999999999999999999999975322110 0011110000000000
Q ss_pred cccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCC
Q psy6391 251 KTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 305 (313)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~ 305 (313)
.....++++.++|.+||+.||.+||++.++++||||.....
T Consensus 221 --------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~ 261 (279)
T cd06619 221 --------------PVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYND 261 (279)
T ss_pred --------------CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccC
Confidence 00236789999999999999999999999999999988643
No 167
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6.3e-43 Score=329.32 Aligned_cols=270 Identities=31% Similarity=0.526 Sum_probs=217.7
Q ss_pred CCchhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEe
Q psy6391 5 ATDDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIE 84 (313)
Q Consensus 5 ~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 84 (313)
.-.+....+++|.+++.||.|+||.||++.+..++..+++|++............+..|+.+++.++||||++++++|.+
T Consensus 4 ~~~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d 83 (1021)
T PTZ00266 4 KYDDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLN 83 (1021)
T ss_pred cccCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEe
Confidence 34456677899999999999999999999999999999999997665444445678899999999999999999998864
Q ss_pred --CcEEEEEEecccc-CHHHHHhhC-CCCCCCCHHHHHHHHHHHHHHHHHHHhC-------CceeccCCCCCEEEecC--
Q psy6391 85 --NYRLYLIFEFMSM-DLKKYIDTV-PKGQFLAADKVKSITYQIFQAILFCHKR-------RVLHRDLKPQNLLIDAK-- 151 (313)
Q Consensus 85 --~~~~~lv~e~~~~-~l~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~Lh~~-------~i~H~di~~~Nil~~~~-- 151 (313)
...+++||||+++ +|.+++... .....+++..++.++.||+.||.|||+. +|+|+||||+|||++..
T Consensus 84 e~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~ 163 (1021)
T PTZ00266 84 KANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIR 163 (1021)
T ss_pred cCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcc
Confidence 4578999999985 888887653 2235699999999999999999999984 49999999999999642
Q ss_pred --------------CCeEEEecCCCccccCCCCcccccccccccccchhhhcCC-CCCCcchhHhHHHHHHHHHHhCCCC
Q psy6391 152 --------------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS-QRYSCPVDVWSIGCIFAEIATRKPL 216 (313)
Q Consensus 152 --------------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~~Di~slG~~l~~ll~g~~p 216 (313)
...++|+|||++....... ......|++.|+|||++... ..++.++|||||||+||+|++|..|
T Consensus 164 ~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~P 242 (1021)
T PTZ00266 164 HIGKITAQANNLNGRPIAKIGDFGLSKNIGIES-MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTP 242 (1021)
T ss_pred ccccccccccccCCCCceEEccCCccccccccc-cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCC
Confidence 1238999999997664332 22345789999999998543 3578999999999999999999999
Q ss_pred CCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 217 FQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 217 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
|...................+ ....+.++.+||..||+.+|.+||++.++|.
T Consensus 243 F~~~~~~~qli~~lk~~p~lp----------------------------i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 243 FHKANNFSQLISELKRGPDLP----------------------------IKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCcCCcHHHHHHHHhcCCCCC----------------------------cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 987655444433332110000 1246799999999999999999999999999
Q ss_pred CCCCCCC
Q psy6391 297 HKYFADK 303 (313)
Q Consensus 297 h~~~~~~ 303 (313)
||||+..
T Consensus 295 h~~ik~i 301 (1021)
T PTZ00266 295 YQIIKNV 301 (1021)
T ss_pred cHHHhhc
Confidence 9999864
No 168
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=7.9e-43 Score=295.96 Aligned_cols=261 Identities=30% Similarity=0.486 Sum_probs=212.2
Q ss_pred hhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEeC---
Q psy6391 10 KSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIEN--- 85 (313)
Q Consensus 10 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~--- 85 (313)
+...++|++.+.||.|++|.||+|.++.+++.+++|++...... ...+.+|+.+++++ +|+||+++++++...
T Consensus 2 ~~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (275)
T cd06608 2 PDPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDE---EEEIKEEYNILRKYSNHPNIATFYGAFIKKNPP 78 (275)
T ss_pred CCchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchh---HHHHHHHHHHHHHhcCCCChheEEEEEEecCCC
Confidence 34568999999999999999999999888999999998755432 36788999999999 799999999999754
Q ss_pred ---cEEEEEEecccc-CHHHHHhhCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecC
Q psy6391 86 ---YRLYLIFEFMSM-DLKKYIDTVP-KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADF 160 (313)
Q Consensus 86 ---~~~~lv~e~~~~-~l~~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df 160 (313)
..++++|||+++ +|.+++.... .+..+++..++.++.|++.||.|||+.|++|+||+|+||+++.++. ++|+||
T Consensus 79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~-~~l~d~ 157 (275)
T cd06608 79 GNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAE-VKLVDF 157 (275)
T ss_pred CcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCe-EEECCC
Confidence 458999999986 7877776532 2456899999999999999999999999999999999999998876 999999
Q ss_pred CCccccCCCCcccccccccccccchhhhcC----CCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCC
Q psy6391 161 GLARAFGVPVRIYTHEVVTLWYRAPEVLLG----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTP 236 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~----~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~ 236 (313)
|.+..............++..|+|||.+.. ...++.++|+||||+++|++++|+.||..........++.....+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~- 236 (275)
T cd06608 158 GVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPP- 236 (275)
T ss_pred ccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCC-
Confidence 998766544443444567889999998743 234678999999999999999999999876555544443321110
Q ss_pred CCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 237 TEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
.+. .....++++.+||.+||+.||++|||+.++++|||+
T Consensus 237 ---~~~----------------------~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 237 ---TLK----------------------SPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred ---CCC----------------------chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 000 001367899999999999999999999999999996
No 169
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=9.4e-43 Score=296.11 Aligned_cols=253 Identities=28% Similarity=0.400 Sum_probs=200.2
Q ss_pred eccccceEEEEEEeCcCCcEEEEEEecccCCCC-CCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc-CH
Q psy6391 22 IGEGTYGVVYKAKNKVTGALVAIKKIRMENDDE-GIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM-DL 99 (313)
Q Consensus 22 lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~-~l 99 (313)
||+|+||.||++..+.+++.|++|.+....... .....+..|+++++.++||||+++++.+.++...++||||+.| +|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999999899999999987543221 1123456799999999999999999999999999999999975 77
Q ss_pred HHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccccccccc
Q psy6391 100 KKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHEVVT 179 (313)
Q Consensus 100 ~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 179 (313)
.+.+... ....+++..+..++.||+.||.|||+.|++|+||+|+||+++.++. ++|+|||++....... ......++
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~-~~l~Dfg~~~~~~~~~-~~~~~~~~ 157 (277)
T cd05607 81 KYHIYNV-GERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGN-CRLSDLGLAVELKDGK-TITQRAGT 157 (277)
T ss_pred HHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCC-EEEeeceeeeecCCCc-eeeccCCC
Confidence 7666543 2334889999999999999999999999999999999999998877 9999999987664332 22334678
Q ss_pred ccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCch
Q psy6391 180 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN 259 (313)
Q Consensus 180 ~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (313)
..|+|||.+.+.. ++.++|+||+|+++|+|++|..||......................
T Consensus 158 ~~y~aPE~~~~~~-~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------- 216 (277)
T cd05607 158 NGYMAPEILKEEP-YSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVK-------------------- 216 (277)
T ss_pred CCccCHHHHccCC-CCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccc--------------------
Confidence 8999999987655 8999999999999999999999997643322111221111000000
Q ss_pred hhhhhhccCCCHHHHHHHHHHhccCCCCCCCH----HHHhcCCCCCC
Q psy6391 260 FCLDKHVKNLDQDGLDLLEKTLIYCPATRINA----ENALKHKYFAD 302 (313)
Q Consensus 260 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~----~e~l~h~~~~~ 302 (313)
.....+++++.+++.+||+.||.+||++ .+++.||||+.
T Consensus 217 ----~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~ 259 (277)
T cd05607 217 ----FEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKT 259 (277)
T ss_pred ----cccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcC
Confidence 0002478999999999999999999999 77889999987
No 170
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=5.3e-43 Score=304.89 Aligned_cols=262 Identities=25% Similarity=0.371 Sum_probs=211.6
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccC-CCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEN-DDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
++|++.+.||+|+||.||++.+..+++.||+|++.... ........+.+|..++..++|++|+.+++++.+++..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 58999999999999999999999999999999987532 11222345778899999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
||+.| +|.+++... ...+++..+..++.||+.||.|||++|++|+||||+||+++.++. ++|+|||++........
T Consensus 81 Ey~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~-~kl~DfG~a~~~~~~~~ 157 (331)
T cd05624 81 DYYVGGDLLTLLSKF--EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGH-IRLADFGSCLKMNQDGT 157 (331)
T ss_pred eCCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCC-EEEEeccceeeccCCCc
Confidence 99975 888887652 335899999999999999999999999999999999999998877 99999999876543322
Q ss_pred -ccccccccccccchhhhcCC----CCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 172 -IYTHEVVTLWYRAPEVLLGS----QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 172 -~~~~~~~~~~~~~PE~~~~~----~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
......|+..|+|||.+... ..++.++|+||+|+++|+|++|+.||...+.......+........
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~--------- 228 (331)
T cd05624 158 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ--------- 228 (331)
T ss_pred eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCccc---------
Confidence 11234689999999988642 3468899999999999999999999998777666665543211110
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCC--CCCHHHHhcCCCCCC
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPAT--RINAENALKHKYFAD 302 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~--Rps~~e~l~h~~~~~ 302 (313)
++ .....++.++.++|.+||..++.+ |++++++++||||..
T Consensus 229 -------~p--------~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~ 271 (331)
T cd05624 229 -------FP--------SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG 271 (331)
T ss_pred -------CC--------CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence 00 011247899999999999976655 579999999999986
No 171
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.2e-42 Score=296.01 Aligned_cols=266 Identities=26% Similarity=0.430 Sum_probs=213.4
Q ss_pred CchhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEe
Q psy6391 6 TDDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIE 84 (313)
Q Consensus 6 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~ 84 (313)
..++....++|.+.+.||.|++|.||++.+..+++.+++|++.... .....+.+|+.+++++ +|||++++++++..
T Consensus 14 ~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 14 LESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred cccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 3556667899999999999999999999999899999999986532 2235677899999998 89999999999874
Q ss_pred C-----cEEEEEEecccc-CHHHHHhhC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEE
Q psy6391 85 N-----YRLYLIFEFMSM-DLKKYIDTV-PKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKV 157 (313)
Q Consensus 85 ~-----~~~~lv~e~~~~-~l~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l 157 (313)
. +..++|+||+++ +|.+++... .....+++..++.++.|++.+|++||+.|++|+||+|+||+++.++. ++|
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~-~kl 169 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGG-VKL 169 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCC-EEE
Confidence 3 468999999975 887776542 23456899999999999999999999999999999999999998877 999
Q ss_pred ecCCCccccCCCCcccccccccccccchhhhcCCC----CCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc
Q psy6391 158 ADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQ----RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVL 233 (313)
Q Consensus 158 ~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~----~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~ 233 (313)
+|||.+..............++..|+|||.+.... ..+.++|+||+|+++|++++|..||...........+....
T Consensus 170 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~ 249 (291)
T cd06639 170 VDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNP 249 (291)
T ss_pred eecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCC
Confidence 99999876543322223446788899999875432 25789999999999999999999998776655554433211
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCC
Q psy6391 234 TTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA 301 (313)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~ 301 (313)
... ... ....+.++.++|.+||+.+|++||++.++++||||+
T Consensus 250 ~~~----~~~----------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 250 PPT----LLH----------------------PEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred CCC----CCc----------------------ccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 100 000 023567899999999999999999999999999995
No 172
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.3e-42 Score=294.42 Aligned_cols=257 Identities=29% Similarity=0.473 Sum_probs=207.6
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEeC-----
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIEN----- 85 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~----- 85 (313)
.-+.|++.+.||+|++|.||.|.+..+++.+++|.+...... ...+.+|+.+++.+ +|+|++++++++...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~---~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE---EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCcc---HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 346788999999999999999999989999999998754322 36788999999998 799999999998753
Q ss_pred -cEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCc
Q psy6391 86 -YRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLA 163 (313)
Q Consensus 86 -~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~ 163 (313)
..++++|||+++ +|.+++... ....+++..+..++.|++.+++|||+++++|+||+|+||+++.++. ++|+|||++
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~-~~l~Dfg~~ 158 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAE-VKLVDFGVS 158 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCC-EEEccCCCc
Confidence 468999999985 888877653 2345899999999999999999999999999999999999998877 999999998
Q ss_pred cccCCCCcccccccccccccchhhhcC----CCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCC
Q psy6391 164 RAFGVPVRIYTHEVVTLWYRAPEVLLG----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 239 (313)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~PE~~~~----~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
..............|+..|+|||++.. ...++.++|+||+|+++|+|++|..||....................
T Consensus 159 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-- 236 (272)
T cd06637 159 AQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRL-- 236 (272)
T ss_pred eecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCC--
Confidence 765433333344567889999999853 22477899999999999999999999986655443333221100000
Q ss_pred CCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 240 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
....++.++.+|+.+||+.||.+|||+.+++.||||
T Consensus 237 -------------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 237 -------------------------KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred -------------------------CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 002467899999999999999999999999999998
No 173
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=2.3e-42 Score=291.19 Aligned_cols=257 Identities=30% Similarity=0.476 Sum_probs=211.2
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
++|++.+.||.|++|.||.+.+..+++.+++|++...... ....+.+|+.++++++|||++++++++.+.+..+++||
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e 80 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD--DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVME 80 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh--hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEe
Confidence 6899999999999999999999888899999999765433 34778899999999999999999999999999999999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
|+++ +|.+++... ...+++..++.++.|++.++.|||+.|++|+||+|+||+++.++. ++|+|||.+.........
T Consensus 81 ~~~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~-~~l~d~g~~~~~~~~~~~ 157 (262)
T cd06613 81 YCGGGSLQDIYQVT--RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGD-VKLADFGVSAQLTATIAK 157 (262)
T ss_pred CCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCC-EEECccccchhhhhhhhc
Confidence 9986 777776652 245899999999999999999999999999999999999998877 999999998766443322
Q ss_pred cccccccccccchhhhcCC--CCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCc
Q psy6391 173 YTHEVVTLWYRAPEVLLGS--QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY 250 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~--~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (313)
.....++..|+|||.+... ...+.++|+||+|+++|+|++|..||..................+.. ..
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~-------- 227 (262)
T cd06613 158 RKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPK--LK-------- 227 (262)
T ss_pred cccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCcc--cc--------
Confidence 3344678889999988654 24788999999999999999999999877655544433321111100 00
Q ss_pred cccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCC
Q psy6391 251 KTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 299 (313)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~ 299 (313)
....++.++.+|+.+||..+|.+|||+.+++.|+|
T Consensus 228 --------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 228 --------------DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred --------------chhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 00235788999999999999999999999999998
No 174
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.7e-42 Score=308.27 Aligned_cols=275 Identities=23% Similarity=0.351 Sum_probs=208.7
Q ss_pred hccceeeeeeccccceEEEEEEeC--cCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNK--VTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYL 90 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~--~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 90 (313)
..+|.+++.||+|++|.||++... .++..|++|.+... ....+|+.+++.++||||+++++.+......++
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l 163 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRWKSTVCM 163 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence 357999999999999999999754 34678999987543 234689999999999999999999999999999
Q ss_pred EEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCC
Q psy6391 91 IFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV 170 (313)
Q Consensus 91 v~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~ 170 (313)
+||++.++|...+.. ...+++..++.++.||+.||.|||++|++|+||||+|||++.++. ++|+|||++.......
T Consensus 164 v~e~~~~~l~~~l~~---~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~-~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 164 VMPKYKCDLFTYVDR---SGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPEN-AVLGDFGAACKLDAHP 239 (392)
T ss_pred EehhcCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCC-EEEccCccccccCccc
Confidence 999999998888743 345899999999999999999999999999999999999998877 9999999987654322
Q ss_pred c--ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHhcCCCCCCCCCCCC
Q psy6391 171 R--IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE---IDQLFRIFRVLTTPTEDNWPGVS 245 (313)
Q Consensus 171 ~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
. ......|+..|+|||++... .++.++||||||+++|+|++|..||..... ...+..+.+.....+.. ++...
T Consensus 240 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~-~~~~~ 317 (392)
T PHA03207 240 DTPQCYGWSGTLETNSPELLALD-PYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLE-FPQNG 317 (392)
T ss_pred ccccccccccccCccCHhHhcCC-CCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccc-cCCcc
Confidence 1 12235689999999998754 478999999999999999999999976432 33334444332222111 11100
Q ss_pred C--C----CCccccCCCCchhhhhhh--ccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 246 K--L----PDYKTTFPEWSNFCLDKH--VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 246 ~--~----~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
. + ..+...... ....+.. -..++.++.+||++||..||++|||+.|+|.||||++
T Consensus 318 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~ 380 (392)
T PHA03207 318 STNLCKHFKQYAIVLRP--PYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTK 380 (392)
T ss_pred chhHHHHHHhhcccccC--CccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhc
Confidence 0 0 000000000 0000000 0246788999999999999999999999999999987
No 175
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.2e-42 Score=304.07 Aligned_cols=285 Identities=36% Similarity=0.616 Sum_probs=221.0
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC------c
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN------Y 86 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~ 86 (313)
.++|.+.+.||+|++|.||+|.+..+++.|++|.+............+.+|+.+++.++|+||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 4789999999999999999999988899999999876544444446688999999999999999999998754 3
Q ss_pred EEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 87 RLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 87 ~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
.+++|++|+..++..... ..+++..+..++.|++.||.+||+.|++|+||+|+||+++.++. ++|+|||.+...
T Consensus 94 ~~~lv~e~~~~~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~-~kL~dfg~~~~~ 167 (342)
T cd07879 94 DFYLVMPYMQTDLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCE-LKILDFGLARHA 167 (342)
T ss_pred eEEEEecccccCHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC-EEEeeCCCCcCC
Confidence 569999999887665542 24889999999999999999999999999999999999999877 999999998765
Q ss_pred CCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 167 GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
.... ....++..|+|||.+.+...++.++|+||||+++|+|++|+.||...........+....+.+.+........
T Consensus 168 ~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (342)
T cd07879 168 DAEM---TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLED 244 (342)
T ss_pred CCCC---CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcc
Confidence 3321 2345678899999987655578999999999999999999999998877666666665443332221111110
Q ss_pred CC--CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCC
Q psy6391 247 LP--DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL 306 (313)
Q Consensus 247 ~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~ 306 (313)
.. .+....+......+....+.++.++.+||.+||+.||.+||++.+++.||||.+..+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 245 KAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred cchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 00 0000111111122222335678999999999999999999999999999999986543
No 176
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.1e-42 Score=294.07 Aligned_cols=257 Identities=28% Similarity=0.455 Sum_probs=208.2
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
.++|++.+.||+|++|.||.|.+..+++.|++|+++..... ....+.+|+.+++.++||||+++++.+..++..++++
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~ 85 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGE--DFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM 85 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchh--HHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence 46899999999999999999999989999999998755322 1346778999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
||+++ +|.+++.. .+.+++..++.++.|++.++.|||+.|++|+||+|+||+++.++. ++|+|||.+........
T Consensus 86 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~-~~l~dfg~~~~~~~~~~ 161 (267)
T cd06645 86 EFCGGGSLQDIYHV---TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGH-VKLADFGVSAQITATIA 161 (267)
T ss_pred eccCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC-EEECcceeeeEccCccc
Confidence 99986 78777654 345899999999999999999999999999999999999998877 99999999876544333
Q ss_pred ccccccccccccchhhhc--CCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy6391 172 IYTHEVVTLWYRAPEVLL--GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 249 (313)
Q Consensus 172 ~~~~~~~~~~~~~PE~~~--~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (313)
......|+..|+|||.+. ....++.++|+||||+++|+|++|..||..................+ ..+.
T Consensus 162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~------- 232 (267)
T cd06645 162 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQP--PKLK------- 232 (267)
T ss_pred ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCC--Cccc-------
Confidence 334456889999999874 23347889999999999999999999997655433332222111110 0000
Q ss_pred ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCC
Q psy6391 250 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 299 (313)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~ 299 (313)
....++..+.++|.+||+.||++||++.++++|||
T Consensus 233 ---------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 233 ---------------DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred ---------------ccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 00236788999999999999999999999999998
No 177
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.2e-42 Score=293.81 Aligned_cols=257 Identities=28% Similarity=0.435 Sum_probs=206.3
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
.++|++.+.||+|++|.||+|.+..+++.+++|++...... ....+.+|+.+++.++|||++++++++..++..++|+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~--~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~ 85 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGD--DFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM 85 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccc--hHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence 46899999999999999999999889999999998654322 2356778999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
||+++ +|.+.+.. ...+++..+..++.|++.++.|||+.|++|+|++|+||+++.++. ++|+|||.+........
T Consensus 86 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~-~~l~dfg~~~~~~~~~~ 161 (267)
T cd06646 86 EYCGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGD-VKLADFGVAAKITATIA 161 (267)
T ss_pred eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCC-EEECcCccceeeccccc
Confidence 99985 77777754 345899999999999999999999999999999999999998877 99999999976643332
Q ss_pred ccccccccccccchhhhcC--CCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy6391 172 IYTHEVVTLWYRAPEVLLG--SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 249 (313)
Q Consensus 172 ~~~~~~~~~~~~~PE~~~~--~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (313)
......++..|+|||.+.. ....+.++|+||+|+++|+|++|+.||...........+......+ +.+
T Consensus 162 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~-------- 231 (267)
T cd06646 162 KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQP--PKL-------- 231 (267)
T ss_pred ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCC--CCC--------
Confidence 2233467888999998742 2346789999999999999999999997554433222211110000 000
Q ss_pred ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCC
Q psy6391 250 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 299 (313)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~ 299 (313)
.....++.++.+||.+||+.+|++||+++++++|+|
T Consensus 232 --------------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 232 --------------KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred --------------ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 001246889999999999999999999999999987
No 178
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.7e-42 Score=303.06 Aligned_cols=284 Identities=31% Similarity=0.584 Sum_probs=215.5
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC-------
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN------- 85 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 85 (313)
-++|.+.+.||.|++|.||+|.+..++..|++|.+..... .....+.+|+.+++.++|||++++++.+...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 3789999999999999999999999999999999865543 2246788999999999999999999876643
Q ss_pred -------cEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEe
Q psy6391 86 -------YRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVA 158 (313)
Q Consensus 86 -------~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~ 158 (313)
...++|+||++++|.+.+.. ..+++..++.++.||+.||.|||+.|++|+||+|+||+++.++..++++
T Consensus 82 ~~~~~~~~~~~lv~e~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 82 VGSLTELNSVYIVQEYMETDLANVLEQ----GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred cccccccceEEEEeecccccHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEEC
Confidence 35789999999888776643 3488999999999999999999999999999999999998776668999
Q ss_pred cCCCccccCCCCc---ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCC
Q psy6391 159 DFGLARAFGVPVR---IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT 235 (313)
Q Consensus 159 df~~~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~ 235 (313)
|||.+........ ......++..|+|||.+.....++.++||||||+++|+|++|..||..................
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPV 237 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 9999876532211 1122356788999998765556789999999999999999999999888776665555543222
Q ss_pred CCCCCCCCCC-CCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 236 PTEDNWPGVS-KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 236 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
.......... ..+..................+.++.++.+||.+||+.||.+|||+.+++.||||+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~ 305 (342)
T cd07854 238 VREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC 305 (342)
T ss_pred CChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence 1111111000 000000000000001112223468899999999999999999999999999999975
No 179
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=3.7e-42 Score=293.66 Aligned_cols=261 Identities=26% Similarity=0.489 Sum_probs=213.4
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEec
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
.|...+.||.|++|.||++.+..+++.+++|++...... ....+.+|+.+++.++|+|++++++++..++..++++||
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~ 97 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEF 97 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchh--HHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEec
Confidence 455568999999999999999888999999988643322 235678999999999999999999999999999999999
Q ss_pred ccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccc
Q psy6391 95 MSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIY 173 (313)
Q Consensus 95 ~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~ 173 (313)
+.+ +|.+.+.. ..+++..+..++.|++.++++||+.|++|+||+|+||+++.++. ++|+|||.+..........
T Consensus 98 ~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~-~~l~d~g~~~~~~~~~~~~ 172 (285)
T cd06648 98 LEGGALTDIVTH----TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGR-VKLSDFGFCAQVSKEVPRR 172 (285)
T ss_pred cCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCc-EEEcccccchhhccCCccc
Confidence 975 88777764 34889999999999999999999999999999999999998876 9999999876554332222
Q ss_pred ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcccc
Q psy6391 174 THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT 253 (313)
Q Consensus 174 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (313)
....++..|+|||.+.+. .++.++|+||+|+++|++++|+.||...+............ .+... .
T Consensus 173 ~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~-~~~~~---~---------- 237 (285)
T cd06648 173 KSLVGTPYWMAPEVISRL-PYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNL-PPKLK---N---------- 237 (285)
T ss_pred ccccCCccccCHHHhcCC-CCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcC-CCCCc---c----------
Confidence 334678899999998654 47899999999999999999999998877665555443321 10000 0
Q ss_pred CCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCCCc
Q psy6391 254 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF 309 (313)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~~~ 309 (313)
...++..+.+|+.+||+.+|++||++.++++||||++..+.+.+
T Consensus 238 ------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~~ 281 (285)
T cd06648 238 ------------LHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPPSSI 281 (285)
T ss_pred ------------cccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCCcchh
Confidence 02377899999999999999999999999999999997765544
No 180
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.5e-43 Score=297.46 Aligned_cols=262 Identities=25% Similarity=0.452 Sum_probs=210.2
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
++|++++.||+|++|.||++.+..++..+++|.+..... ......+.+|+.++++++|+||+++++.+..++..++|+|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELD-ESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCME 79 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEe
Confidence 478999999999999999999998999999998865422 2223578899999999999999999999999999999999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHK-RRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~-~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
|+++ +|..++........+++..+..++.||+.+|.|||+ .|++|+||+|+||+++.++. ++|+|||.+........
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~-~~l~dfg~~~~~~~~~~ 158 (286)
T cd06622 80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQ-VKLCDFGVSGNLVASLA 158 (286)
T ss_pred ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCC-EEEeecCCcccccCCcc
Confidence 9986 776766653334468999999999999999999997 59999999999999998766 99999999876533222
Q ss_pred ccccccccccccchhhhcCCC-----CCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 172 IYTHEVVTLWYRAPEVLLGSQ-----RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 172 ~~~~~~~~~~~~~PE~~~~~~-----~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
....++..|+|||.+.+.. .++.++|+||+|+++|++++|..||...................... .
T Consensus 159 --~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~----- 230 (286)
T cd06622 159 --KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPT-L----- 230 (286)
T ss_pred --ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCC-C-----
Confidence 3345678899999875432 25789999999999999999999997655443333322211111100 0
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCC
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 304 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~ 304 (313)
.+.++.++.+||.+||+.+|.+||++.++++||||....
T Consensus 231 -------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~ 269 (286)
T cd06622 231 -------------------PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK 269 (286)
T ss_pred -------------------CcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence 024789999999999999999999999999999998753
No 181
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.5e-42 Score=295.73 Aligned_cols=261 Identities=27% Similarity=0.462 Sum_probs=207.5
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHH-HhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISV-LKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~-l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
++|++.+.||+|++|.||++.++.+++.||+|+++....... ...+..|+.. ++..+|||++++++++..++..++++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE-QKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH-HHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 479999999999999999999999999999999876533222 2345556654 56668999999999999999999999
Q ss_pred eccccCHHHHHhhC-CCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCCEEEecCCCeEEEecCCCccccCCCC
Q psy6391 93 EFMSMDLKKYIDTV-PKGQFLAADKVKSITYQIFQAILFCHKR-RVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV 170 (313)
Q Consensus 93 e~~~~~l~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~Lh~~-~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~ 170 (313)
||++++|.+.++.. .....+++..++.++.||+.||.|||++ +++|+||+|+||+++.++. ++|+|||.+.......
T Consensus 80 e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~-~kl~dfg~~~~~~~~~ 158 (283)
T cd06617 80 EVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQ-VKLCDFGISGYLVDSV 158 (283)
T ss_pred hhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCC-EEEeeccccccccccc
Confidence 99999988887653 2345689999999999999999999997 9999999999999998877 9999999987653321
Q ss_pred cccccccccccccchhhhcCC---CCCCcchhHhHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 171 RIYTHEVVTLWYRAPEVLLGS---QRYSCPVDVWSIGCIFAEIATRKPLFQGDS-EIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 171 ~~~~~~~~~~~~~~PE~~~~~---~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
......++..|+|||.+.+. ...+.++|+||+|+++|+|++|+.||.... .............+.. +
T Consensus 159 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~---- 229 (283)
T cd06617 159 -AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQL----P---- 229 (283)
T ss_pred -ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCC----C----
Confidence 11234577889999988542 236889999999999999999999997532 2233333222111100 0
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCC
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 304 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~ 304 (313)
...+|.++.++|.+||+.+|.+||++.++++||||....
T Consensus 230 -------------------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 230 -------------------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred -------------------ccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 023789999999999999999999999999999999854
No 182
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=5.9e-42 Score=292.55 Aligned_cols=279 Identities=48% Similarity=0.880 Sum_probs=221.6
Q ss_pred ceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc---CCCCceeeceeEEeCcE-----
Q psy6391 16 YEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL---NHPNIVQLHDTMIENYR----- 87 (313)
Q Consensus 16 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l---~~~~i~~~~~~~~~~~~----- 87 (313)
|++.+.||.|++|.||++.++.+++.+++|.+............+.+|+.+++.+ +|++++++++++.+.+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 7889999999999999999988899999999976554444445677788877766 59999999999988776
Q ss_pred EEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 88 LYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 88 ~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
.+++||+++++|.+.+..... ..+++..++.++.|++.||.+||+.|++|+||+|+||+++.++. ++|+|||.+....
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~-~~l~dfg~~~~~~ 158 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQ-VKIADFGLARIYS 158 (287)
T ss_pred eEEEehhcccCHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCC-EEEeccCcceecc
Confidence 999999999988887765332 35899999999999999999999999999999999999999976 9999999987764
Q ss_pred CCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCC
Q psy6391 168 VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 247 (313)
Q Consensus 168 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
.... .....++..|+|||.+.+.. .+.++|+||+|+++|+|++|..||......+...++......+....++.....
T Consensus 159 ~~~~-~~~~~~~~~~~~PE~~~~~~-~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd07838 159 FEMA-LTSVVVTLWYRAPEVLLQSS-YATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSL 236 (287)
T ss_pred CCcc-cccccccccccChHHhccCC-CCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCccc
Confidence 3322 12335678899999987644 789999999999999999999999998888888777765554444333322111
Q ss_pred CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 248 PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
. ...++...........+.++..+.++|.+||+.||.+||++.+++.||||
T Consensus 237 ~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 237 P--RSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred c--hhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 0 11112222222233335678999999999999999999999999999997
No 183
>KOG0193|consensus
Probab=100.00 E-value=2.4e-44 Score=312.88 Aligned_cols=261 Identities=23% Similarity=0.313 Sum_probs=218.1
Q ss_pred CCchhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEe
Q psy6391 5 ATDDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIE 84 (313)
Q Consensus 5 ~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 84 (313)
+..+|.+..++..+...||+|.||+||+|.+. | .||||++.....+.+..+.|++|+.+++..+|.||+-+.|++..
T Consensus 383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--G-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWH--G-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred cccccccCHHHhhccceeccccccceeecccc--c-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 34788889999999999999999999999997 3 49999999988777788999999999999999999999999999
Q ss_pred CcEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCc
Q psy6391 85 NYRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLA 163 (313)
Q Consensus 85 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~ 163 (313)
+.. .||+-+++| +|+..+... ...+...+...|++||++|+.|||.++|+|+|||+.||++.+++. |+|+|||++
T Consensus 460 p~~-AIiTqwCeGsSLY~hlHv~--etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~k-VkIgDFGLa 535 (678)
T KOG0193|consen 460 PPL-AIITQWCEGSSLYTHLHVQ--ETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLK-VKIGDFGLA 535 (678)
T ss_pred Cce-eeeehhccCchhhhhccch--hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCc-EEEecccce
Confidence 977 999999998 777777653 345889999999999999999999999999999999999998866 999999998
Q ss_pred cccC--CCCcccccccccccccchhhhcC--CCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCC
Q psy6391 164 RAFG--VPVRIYTHEVVTLWYRAPEVLLG--SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 239 (313)
Q Consensus 164 ~~~~--~~~~~~~~~~~~~~~~~PE~~~~--~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
.... ..........|...|||||+++. ..++++.+||||+|+++|||++|..||.......++..+-++-..+
T Consensus 536 tvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~p--- 612 (678)
T KOG0193|consen 536 TVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMP--- 612 (678)
T ss_pred eeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCc---
Confidence 6542 33344455677889999999853 3468999999999999999999999999555544443332221111
Q ss_pred CCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 240 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
.+.+.....+.++.+|+..||..++++||.+.+||+
T Consensus 613 ---------------------d~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 613 ---------------------DLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred ---------------------cchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 112222457789999999999999999999999987
No 184
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.8e-42 Score=291.62 Aligned_cols=253 Identities=28% Similarity=0.519 Sum_probs=207.0
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCC-------CchhHHHHHHHHhhcCCCCceeeceeEEeCcE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEG-------IPATAIREISVLKELNHPNIVQLHDTMIENYR 87 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 87 (313)
+|.+.+.||.|++|.||.|.+..+++.+++|.+........ ..+.+.+|+.+++.++||+|+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 47888999999999999999988899999998875543221 12457789999999999999999999999999
Q ss_pred EEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 88 LYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 88 ~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
.++++||+.+ +|.+.+... +.+++..+..++.|++.+|.+||+.|++|+||+|+||+++.++. ++|+|||.+...
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~-~~l~dfg~~~~~ 156 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY---GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGG-IKISDFGISKKL 156 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCC-EEecccCCCccc
Confidence 9999999976 787887653 34889999999999999999999999999999999999998877 999999998766
Q ss_pred CCCCc------ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCC
Q psy6391 167 GVPVR------IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDN 240 (313)
Q Consensus 167 ~~~~~------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
..... ......++..|+|||.+.+. .++.++|+||+|+++|++++|+.||...+.............+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--- 232 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQT-SYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEI--- 232 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccC-CCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcC---
Confidence 42211 11223467889999988654 478899999999999999999999987766544443332111100
Q ss_pred CCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 241 WPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
...++.++.++|.+||+.||++||++.++++||||
T Consensus 233 -------------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 233 -------------------------PSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred -------------------------CcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 02467999999999999999999999999999997
No 185
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.7e-42 Score=291.02 Aligned_cols=256 Identities=31% Similarity=0.537 Sum_probs=212.0
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEe--CcEEEEEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIE--NYRLYLIF 92 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~ 92 (313)
+|++.+.||.|++|.||++.+..++..+++|.+............+.+|+++++.++|+|++++++++.. +...++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 5899999999999999999999899999999987654444344678889999999999999999998764 45789999
Q ss_pred ecccc-CHHHHHhhC-CCCCCCCHHHHHHHHHHHHHHHHHHH-----hCCceeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 93 EFMSM-DLKKYIDTV-PKGQFLAADKVKSITYQIFQAILFCH-----KRRVLHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 93 e~~~~-~l~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~Lh-----~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
||+++ +|.+.+... ....++++..++.++.||+.+|.+|| +.+++|+||+|+||+++.++. ++|+|||.+..
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~-~kl~d~g~~~~ 159 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNN-VKLGDFGLAKI 159 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCC-EEEeccccccc
Confidence 99975 888887653 23456899999999999999999999 889999999999999998876 99999999987
Q ss_pred cCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCC
Q psy6391 166 FGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 245 (313)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
............++..|+|||.+.+.. .+.++|+||||++++++++|..||...........+........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------- 230 (265)
T cd08217 160 LGHDSSFAKTYVGTPYYMSPEQLNHMS-YDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRI-------- 230 (265)
T ss_pred ccCCcccccccccCCCccChhhhcCCC-CCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCC--------
Confidence 755443233456788999999986644 78999999999999999999999998775554444432211110
Q ss_pred CCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 246 KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
...++.++.+++.+||+.+|++||++.++++|||+
T Consensus 231 --------------------~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 231 --------------------PYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred --------------------ccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 02467999999999999999999999999999996
No 186
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.9e-42 Score=292.77 Aligned_cols=259 Identities=27% Similarity=0.498 Sum_probs=207.4
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCC----CCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDE----GIPATAIREISVLKELNHPNIVQLHDTMIENYRLYL 90 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 90 (313)
+|+..+.||+|++|.||.+.+..+++.+++|++....... .....+.+|+.++++++|+|++++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4888999999999999999998899999999987543221 123578899999999999999999999999999999
Q ss_pred EEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 91 IFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 91 v~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
|+||+.+ +|.+++.. ..++++..+..++.||+.||.+||++|++|+||+|+||+++.++..++|+|||.+......
T Consensus 81 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 81 FVEWMAGGSVSHLLSK---YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EEeccCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 9999986 78777764 3358899999999999999999999999999999999999887766999999998765432
Q ss_pred Cc----ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCC
Q psy6391 170 VR----IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 245 (313)
Q Consensus 170 ~~----~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
.. ......++..|+|||.+.+. ..+.++|+||+|++++++++|+.||...........+............
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---- 232 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGE-QYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSI---- 232 (268)
T ss_pred cccCCccccccccccceeCHhHhccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCC----
Confidence 11 11223567889999988654 4789999999999999999999999755432222222221110000000
Q ss_pred CCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCC
Q psy6391 246 KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA 301 (313)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~ 301 (313)
...+++++.+++.+||..+|.+||++.+++.||||+
T Consensus 233 --------------------~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 233 --------------------PEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred --------------------chhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 024679999999999999999999999999999985
No 187
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.8e-42 Score=295.14 Aligned_cols=264 Identities=29% Similarity=0.469 Sum_probs=211.2
Q ss_pred CCchhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEE
Q psy6391 5 ATDDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMI 83 (313)
Q Consensus 5 ~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~ 83 (313)
+..+.....+.|++.+.||.|++|.||+|.+..+++.+++|++...... ...+..|+.+++++ +|+|++++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~---~~~~~~e~~~l~~~~~h~~i~~~~~~~~ 83 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDE---EEEIKLEINMLKKYSHHRNIATYYGAFI 83 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHH---HHHHHHHHHHHHHhcCCCcEEEEeeehh
Confidence 3344455668999999999999999999999989999999998654322 35678899999998 7999999999985
Q ss_pred ------eCcEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEE
Q psy6391 84 ------ENYRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVK 156 (313)
Q Consensus 84 ------~~~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~ 156 (313)
.....+++|||+++ +|.+++.... ...+++..++.++.||+.++.|||+.|++|+||+|+||+++.++. ++
T Consensus 84 ~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~-~~ 161 (282)
T cd06636 84 KKSPPGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAE-VK 161 (282)
T ss_pred cccccCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC-EE
Confidence 34688999999986 7878776533 345889999999999999999999999999999999999998877 99
Q ss_pred EecCCCccccCCCCcccccccccccccchhhhcC----CCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHh
Q psy6391 157 VADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRV 232 (313)
Q Consensus 157 l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~----~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~ 232 (313)
|+|||++..............++..|+|||.+.. ...++.++|+||||+++|+|++|..||....+......+...
T Consensus 162 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~ 241 (282)
T cd06636 162 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN 241 (282)
T ss_pred EeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhC
Confidence 9999998765433333344567889999998753 234778999999999999999999999766554433332211
Q ss_pred cCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 233 LTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
... .. ....++.++.+||.+||+.||.+||++.|+|.||||
T Consensus 242 ~~~----~~-----------------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 242 PPP----KL-----------------------KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred CCC----CC-----------------------cccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 000 00 002478899999999999999999999999999997
No 188
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=2.8e-42 Score=294.10 Aligned_cols=281 Identities=44% Similarity=0.777 Sum_probs=226.0
Q ss_pred ceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcC-CCCceeeceeEEeCcEEEEEEec
Q psy6391 16 YEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELN-HPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 16 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
|++.+.||.|++|.||+|....+++.+++|.+....... ......+|+..++.++ |++++++++++.+++..++||||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSW-EECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccch-hHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence 678999999999999999998889999999986543321 1234557899999998 99999999999999999999999
Q ss_pred cccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccc
Q psy6391 95 MSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYT 174 (313)
Q Consensus 95 ~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~ 174 (313)
++++|.+.+.... ...+++..+..++.|++.+|.|||++|++|+||+|+||+++.++. ++|+|||.+....... ...
T Consensus 80 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~-~~l~d~~~~~~~~~~~-~~~ 156 (283)
T cd07830 80 MEGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEV-VKIADFGLAREIRSRP-PYT 156 (283)
T ss_pred CCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCC-EEEeecccceeccCCC-CcC
Confidence 9889888876533 245899999999999999999999999999999999999998877 9999999997664322 223
Q ss_pred cccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC-cccc
Q psy6391 175 HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD-YKTT 253 (313)
Q Consensus 175 ~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 253 (313)
...++..|+|||.+.....++.++|+||+|++++++++|+.||......+...........+....|.+...+.. ....
T Consensus 157 ~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd07830 157 DYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFR 236 (283)
T ss_pred CCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccc
Confidence 346788899999886656689999999999999999999999998888888877777766666554444322211 1122
Q ss_pred CCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 254 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
.+...........+..+..+.++|++||+.+|.+|||+.|++.||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 237 FPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred ccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 22222223333334558899999999999999999999999999997
No 189
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.9e-42 Score=296.57 Aligned_cols=267 Identities=27% Similarity=0.465 Sum_probs=217.4
Q ss_pred hhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEE
Q psy6391 10 KSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLY 89 (313)
Q Consensus 10 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 89 (313)
....++|.+.+.||.|++|.||++.+..++..+++|.+...... ..+.+.+|+.+++.++|||++++++++...+..+
T Consensus 15 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~ 92 (293)
T cd06647 15 GDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQP--KKELIINEILVMRENKHPNIVNYLDSYLVGDELW 92 (293)
T ss_pred cCchhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccch--HHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEE
Confidence 44568999999999999999999998888999999998644322 2467889999999999999999999999999999
Q ss_pred EEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCC
Q psy6391 90 LIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGV 168 (313)
Q Consensus 90 lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~ 168 (313)
+|+||+++ +|.+++.. ..+++..+..++.|++.++.+||++|++|+||+|+||+++.++. ++|+|||++.....
T Consensus 93 lv~e~~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~-~kL~dfg~~~~~~~ 167 (293)
T cd06647 93 VVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCAQITP 167 (293)
T ss_pred EEEecCCCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCC-EEEccCcceecccc
Confidence 99999975 77777653 23789999999999999999999999999999999999998876 99999998876544
Q ss_pred CCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy6391 169 PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 248 (313)
Q Consensus 169 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
.........++..|++||.+... ..+.++|+||+|+++|++++|..||...+............ .+ .+.
T Consensus 168 ~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~-~~---~~~------ 236 (293)
T cd06647 168 EQSKRSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG-TP---ELQ------ 236 (293)
T ss_pred cccccccccCChhhcCchhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCC-CC---CCC------
Confidence 33333344678889999988654 47899999999999999999999998765543322221110 00 000
Q ss_pred CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCCCcc
Q psy6391 249 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFA 310 (313)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~~~~ 310 (313)
....++..+.++|.+||+.+|++||++.+++.|+||+....+.+++
T Consensus 237 ----------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~~~~~ 282 (293)
T cd06647 237 ----------------NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPLSSLT 282 (293)
T ss_pred ----------------CccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCccccccc
Confidence 0023678899999999999999999999999999999988776654
No 190
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.7e-42 Score=293.26 Aligned_cols=261 Identities=28% Similarity=0.470 Sum_probs=212.8
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcC---CCCceeeceeEEeCcEEEEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELN---HPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~lv 91 (313)
.|++.+.||.|++|.||+|.+..+++.+++|.+...... .....+.+|+.+++.++ ||+++++++++..+...+++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv 80 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPD-DDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII 80 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCc-hhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence 578899999999999999999889999999998754322 22356788999999996 99999999999999999999
Q ss_pred Eecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCC
Q psy6391 92 FEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV 170 (313)
Q Consensus 92 ~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~ 170 (313)
|||+.+ +|.++++. ..+++..++.++.|++.+|.+||+.|++|+||+|+||+++.++. ++|+|||.+.......
T Consensus 81 ~e~~~~~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~-~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 81 MEYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGN-VKLCDFGVAALLNQNS 155 (277)
T ss_pred EecCCCCcHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCC-EEEccCCceeecCCCc
Confidence 999976 77776653 25899999999999999999999999999999999999998776 9999999998765544
Q ss_pred cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCc
Q psy6391 171 RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY 250 (313)
Q Consensus 171 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (313)
.......|+..|+|||.+.+...++.++|+||+|+++|+|++|..||............... . .+.+.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~--~--~~~~~-------- 223 (277)
T cd06917 156 SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS--K--PPRLE-------- 223 (277)
T ss_pred cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC--C--CCCCC--------
Confidence 33344567888999998866555789999999999999999999999876554333221110 0 00000
Q ss_pred cccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCCC
Q psy6391 251 KTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 308 (313)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~~ 308 (313)
...++.++.+++.+||+.||.+||++.+++.|+||++....|.
T Consensus 224 ---------------~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~~~~~ 266 (277)
T cd06917 224 ---------------DNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHSKTPV 266 (277)
T ss_pred ---------------cccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccccCch
Confidence 0126789999999999999999999999999999988765443
No 191
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.5e-42 Score=296.98 Aligned_cols=262 Identities=24% Similarity=0.449 Sum_probs=212.3
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
+.|.....||.|++|.||++.+..++..+++|.+..... .....+.+|+.+++.++|+|++++++.+..++..++|||
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e 99 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQ--QRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVME 99 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchH--HHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEe
Confidence 445556789999999999999988899999999865332 223567899999999999999999999999999999999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
|+++ +|.+++.. +.+++..++.++.||+.++.|||+.|++|+||+|+||+++.++. ++|+|||++.........
T Consensus 100 ~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~-~kL~dfg~~~~~~~~~~~ 174 (292)
T cd06658 100 FLEGGALTDIVTH----TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGR-IKLSDFGFCAQVSKEVPK 174 (292)
T ss_pred CCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCC-EEEccCcchhhccccccc
Confidence 9986 66666542 34889999999999999999999999999999999999998876 999999998765433333
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
.....++..|+|||.+.+. ..+.++|+||+|+++|++++|..||...........+..........
T Consensus 175 ~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------- 240 (292)
T cd06658 175 RKSLVGTPYWMAPEVISRL-PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKD------------- 240 (292)
T ss_pred CceeecCccccCHHHHccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCcccc-------------
Confidence 3344678899999988654 47889999999999999999999998777655544433321111000
Q ss_pred cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCCCc
Q psy6391 253 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF 309 (313)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~~~ 309 (313)
...++..+.+++.+||..||.+|||+.++++||||......++.
T Consensus 241 -------------~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~~~ 284 (292)
T cd06658 241 -------------SHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPSCI 284 (292)
T ss_pred -------------ccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCcccc
Confidence 02367899999999999999999999999999999986655543
No 192
>KOG0596|consensus
Probab=100.00 E-value=3.5e-43 Score=302.56 Aligned_cols=265 Identities=27% Similarity=0.399 Sum_probs=210.9
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCc
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIENY 86 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 86 (313)
-+...-..|+++++||.||.+.||++... +...|++|.+.....+......+.+|+..|..| .|.+|+++++|-..++
T Consensus 355 ~i~Vkg~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~ 433 (677)
T KOG0596|consen 355 IIKVKGREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDG 433 (677)
T ss_pred eEEECcchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCc
Confidence 34455678999999999999999999876 445678887777777777778999999999999 6999999999999999
Q ss_pred EEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 87 RLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 87 ~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
.+|+|||+-+.+|..+++... ..++...++.++.||+.++.++|+.||||.||||.|+|+... .+||+|||.|...
T Consensus 434 ~lYmvmE~Gd~DL~kiL~k~~--~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG--~LKLIDFGIA~aI 509 (677)
T KOG0596|consen 434 YLYMVMECGDIDLNKILKKKK--SIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKG--RLKLIDFGIANAI 509 (677)
T ss_pred eEEEEeecccccHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEee--eEEeeeechhccc
Confidence 999999998899999998743 335656899999999999999999999999999999998764 3999999999877
Q ss_pred CCCCc--ccccccccccccchhhhcCC----------CCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcC
Q psy6391 167 GVPVR--IYTHEVVTLWYRAPEVLLGS----------QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLT 234 (313)
Q Consensus 167 ~~~~~--~~~~~~~~~~~~~PE~~~~~----------~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~ 234 (313)
..... ....-+||..|||||.+... ...+.++|||||||+||+|+.|+.||..... ...++.....
T Consensus 510 ~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n--~~aKl~aI~~ 587 (677)
T KOG0596|consen 510 QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN--QIAKLHAITD 587 (677)
T ss_pred CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH--HHHHHHhhcC
Confidence 43321 22234799999999998432 1367899999999999999999999985432 2223322222
Q ss_pred CCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 235 TPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
+...= .+++. .-..++.++++.||..||.+||++.++|+|||++-
T Consensus 588 P~~~I-------------efp~~----------~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 588 PNHEI-------------EFPDI----------PENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred CCccc-------------cccCC----------CCchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 21111 12221 11245999999999999999999999999999987
No 193
>KOG0574|consensus
Probab=100.00 E-value=1e-45 Score=297.24 Aligned_cols=256 Identities=24% Similarity=0.469 Sum_probs=219.9
Q ss_pred ceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecc
Q psy6391 16 YEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFM 95 (313)
Q Consensus 16 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 95 (313)
|.++++||+|++|.||++.++.+|+.+|+|.+..+.. .+.+..|+.++++...|++|+++|.|.....+|||||||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sD----LQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC 110 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTD----LQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC 110 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccch----HHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence 6788999999999999999999999999999876532 377889999999999999999999999999999999999
Q ss_pred c-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccc
Q psy6391 96 S-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYT 174 (313)
Q Consensus 96 ~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~ 174 (313)
+ |++-++++. .++++++.++..+++.-+.+|.|||...-+|+|||..|||++.+|. .||+|||.+..+.+......
T Consensus 111 GAGSiSDI~R~--R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~-AKLADFGVAGQLTDTMAKRN 187 (502)
T KOG0574|consen 111 GAGSISDIMRA--RRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGI-AKLADFGVAGQLTDTMAKRN 187 (502)
T ss_pred CCCcHHHHHHH--hcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccch-hhhhhccccchhhhhHHhhC
Confidence 8 688888876 4567999999999999999999999999999999999999999987 99999999998887777778
Q ss_pred cccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccC
Q psy6391 175 HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTF 254 (313)
Q Consensus 175 ~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (313)
...||+.|||||++..-+ +...+||||||++..+|..|++||....+...+..+-. .+|+ ...+
T Consensus 188 TVIGTPFWMAPEVI~EIG-Y~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT--~PPP-----TF~K-------- 251 (502)
T KOG0574|consen 188 TVIGTPFWMAPEVIEEIG-YDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPT--KPPP-----TFKK-------- 251 (502)
T ss_pred ccccCcccccHHHHHHhc-cchhhhHhhhcchhhhhhcCCCCcccccccceeEeccC--CCCC-----CCCC--------
Confidence 889999999999997644 88999999999999999999999997666433322211 1111 1110
Q ss_pred CCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCC
Q psy6391 255 PEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 305 (313)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~ 305 (313)
| ..-|+++.+|+++||.++|++|.|+.++++|||++++.+
T Consensus 252 P-----------E~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g 291 (502)
T KOG0574|consen 252 P-----------EEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPG 291 (502)
T ss_pred h-----------HhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCc
Confidence 1 124788999999999999999999999999999998654
No 194
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2.2e-42 Score=302.51 Aligned_cols=288 Identities=35% Similarity=0.639 Sum_probs=222.2
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc-
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENY- 86 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 86 (313)
.+-...++|++.+.||+|++|.||.+.+..++..|++|++............+.+|+.+++.++|+||+++++++..+.
T Consensus 9 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07880 9 TIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLS 88 (343)
T ss_pred hhhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcc
Confidence 3444667899999999999999999999989999999998654333333456789999999999999999999987553
Q ss_pred -----EEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCC
Q psy6391 87 -----RLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFG 161 (313)
Q Consensus 87 -----~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~ 161 (313)
.+++|+++++++|.+++.. ..+++..++.++.||+.||.|||+.|++|+||+|+||+++.++. ++|+|||
T Consensus 89 ~~~~~~~~lv~e~~~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~-~kl~dfg 163 (343)
T cd07880 89 LDRFHDFYLVMPFMGTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCE-LKILDFG 163 (343)
T ss_pred ccccceEEEEEecCCCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC-EEEeecc
Confidence 4689999998888777653 34899999999999999999999999999999999999998877 9999999
Q ss_pred CccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCC
Q psy6391 162 LARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNW 241 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
.+....... ....++..|+|||.+.+....+.++|+||||+++|++++|..||...+.......+......+.....
T Consensus 164 ~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 240 (343)
T cd07880 164 LARQTDSEM---TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFV 240 (343)
T ss_pred cccccccCc---cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 987654322 23356788999999876455789999999999999999999999988777666666554333221110
Q ss_pred CCCCCC--CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 242 PGVSKL--PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 242 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
...... ..+....+.............+++++.++|.+||+.||++|||+.+++.||||+.-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~ 304 (343)
T cd07880 241 QKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF 304 (343)
T ss_pred HhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence 000000 00001111111111222335688999999999999999999999999999999874
No 195
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=3.2e-42 Score=301.67 Aligned_cols=289 Identities=35% Similarity=0.577 Sum_probs=222.0
Q ss_pred hhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC---
Q psy6391 9 VKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN--- 85 (313)
Q Consensus 9 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--- 85 (313)
+-...++|++.+.||+|++|.||++.+..+++.|++|++............+.+|+.++++++|+||+++++++...
T Consensus 12 ~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~ 91 (345)
T cd07877 12 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL 91 (345)
T ss_pred HhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccc
Confidence 33455899999999999999999999988999999999876543333346678899999999999999999988643
Q ss_pred ---cEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCC
Q psy6391 86 ---YRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGL 162 (313)
Q Consensus 86 ---~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~ 162 (313)
...++++++++++|.+++.. ..+++..++.++.||+.||.|||+.|++|+||+|+||+++.++. ++|+|||+
T Consensus 92 ~~~~~~~lv~~~~~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~-~kl~dfg~ 166 (345)
T cd07877 92 EEFNDVYLVTHLMGADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGL 166 (345)
T ss_pred cccccEEEEehhcccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCC-EEEecccc
Confidence 34789999988888777653 24899999999999999999999999999999999999998876 99999999
Q ss_pred ccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCC
Q psy6391 163 ARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 242 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
+...... .....++..|+|||.+.+....+.++|+||+|+++|+|++|..||...........+......+....+.
T Consensus 167 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T cd07877 167 ARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 243 (345)
T ss_pred ccccccc---ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHh
Confidence 8765432 2334678889999988665557889999999999999999999998877766666665554444333222
Q ss_pred CCCCCCC--ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCC
Q psy6391 243 GVSKLPD--YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 305 (313)
Q Consensus 243 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~ 305 (313)
....... +....+..............++++.+||.+||+.||.+||++.++++||||++...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~ 308 (345)
T cd07877 244 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 308 (345)
T ss_pred hcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCC
Confidence 1111000 00000000011111112346889999999999999999999999999999997544
No 196
>KOG0579|consensus
Probab=100.00 E-value=4.3e-44 Score=312.69 Aligned_cols=262 Identities=27% Similarity=0.468 Sum_probs=222.3
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
+-|.|+..||.|+||.||++.++.++-..|.|++..... .-.+.+.-|+.+|..++||+|+++++.|..++.++|..|
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkse--EELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE 109 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSE--EELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE 109 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccch--hHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence 458899999999999999999998888888888865432 235788899999999999999999999999999999999
Q ss_pred ccccCHH-HHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 94 FMSMDLK-KYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 94 ~~~~~l~-~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
||+|+-. .++-.+ +..+++.++.-+++|++.||+|||+++|+|+|||..|||++.+|+ ++|+|||.+.........
T Consensus 110 FC~GGAVDaimlEL--~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGd-irLADFGVSAKn~~t~qk 186 (1187)
T KOG0579|consen 110 FCGGGAVDAIMLEL--GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGD-IRLADFGVSAKNKSTRQK 186 (1187)
T ss_pred ecCCchHhHHHHHh--ccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCc-EeeecccccccchhHHhh
Confidence 9997543 444443 446999999999999999999999999999999999999999998 999999999877666566
Q ss_pred cccccccccccchhhhc----CCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy6391 173 YTHEVVTLWYRAPEVLL----GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 248 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~----~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
.....||+.|||||+.. ...+|+.++||||||++|.+|..+.+|-...++...+-++.+...+.....
T Consensus 187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqP-------- 258 (1187)
T KOG0579|consen 187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQP-------- 258 (1187)
T ss_pred hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCc--------
Confidence 67789999999999974 345699999999999999999999999999888877777765432222110
Q ss_pred CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCC
Q psy6391 249 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL 306 (313)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~ 306 (313)
..-+..+.+|+.+||..||..||+++++|.|||++.....
T Consensus 259 ------------------S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~Sn 298 (1187)
T KOG0579|consen 259 ------------------SHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPSN 298 (1187)
T ss_pred ------------------chhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCcc
Confidence 2356889999999999999999999999999999975443
No 197
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=7.6e-42 Score=289.19 Aligned_cols=264 Identities=26% Similarity=0.393 Sum_probs=206.4
Q ss_pred hhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEE
Q psy6391 9 VKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRL 88 (313)
Q Consensus 9 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 88 (313)
++.+.+.......||+|++|.||+|.+..++..+++|.+...... ....+.+|+.+++.++|+||+++++++..++..
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSR--YVQPLHEEIALHSYLKHRNIVQYLGSDSENGFF 80 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHH--HHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEE
Confidence 445566666678999999999999999888999999988654322 235788999999999999999999999999999
Q ss_pred EEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 89 YLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 89 ~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
++++||+.+ +|.+.+.........++..+..++.||+.|+.|||+.|++|+||+|+||+++.+...++|+|||.+....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 81 KIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLA 160 (268)
T ss_pred EEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecc
Confidence 999999975 8888776532211127888899999999999999999999999999999998755559999999987654
Q ss_pred CCCcccccccccccccchhhhcCC-CCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 168 VPVRIYTHEVVTLWYRAPEVLLGS-QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 168 ~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
..........++..|+|||.+... ...+.++|+||+|+++|++++|..||.................. .+
T Consensus 161 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~------- 231 (268)
T cd06624 161 GINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKI--HP------- 231 (268)
T ss_pred cCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhcc--CC-------
Confidence 333323334578889999988543 24788999999999999999999999765432221111100000 00
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
.++ ..+++++.+|+.+||+.+|.+|||+.+++.||||
T Consensus 232 ------~~~-----------~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 232 ------EIP-----------ESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred ------CCC-----------cccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 000 2467899999999999999999999999999997
No 198
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2e-42 Score=302.36 Aligned_cols=258 Identities=22% Similarity=0.329 Sum_probs=198.9
Q ss_pred hhhhhccceeeeeeccccceEEEEEEe-----CcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeE
Q psy6391 9 VKSRLEDYEKVEKIGEGTYGVVYKAKN-----KVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTM 82 (313)
Q Consensus 9 ~~~~~~~y~~~~~lg~g~~~~v~~~~~-----~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~ 82 (313)
+....++|++.+.||.|+||.||+|.+ ..++..||+|+++.... ......+.+|+.+++.+ +||||+++++++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 80 (338)
T cd05102 2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT-ASEHKALMSELKILIHIGNHLNVVNLLGAC 80 (338)
T ss_pred cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc-hHHHHHHHHHHHHHHHhccCcceeeEEeEe
Confidence 445567999999999999999999975 23456899999874322 22235688999999999 899999999988
Q ss_pred EeC-cEEEEEEecccc-CHHHHHhhCCC----------------------------------------------------
Q psy6391 83 IEN-YRLYLIFEFMSM-DLKKYIDTVPK---------------------------------------------------- 108 (313)
Q Consensus 83 ~~~-~~~~lv~e~~~~-~l~~~~~~~~~---------------------------------------------------- 108 (313)
... +.++++|||+++ +|.+.+.....
T Consensus 81 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 81 TKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred cCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 754 468999999985 88877764211
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc--cccccccc
Q psy6391 109 -------GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR--IYTHEVVT 179 (313)
Q Consensus 109 -------~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~ 179 (313)
..++++..+..++.||+.||.|||++|++|+||||+||+++.++. ++|+|||++........ ......++
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~-~kl~DfG~a~~~~~~~~~~~~~~~~~~ 239 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNV-VKICDFGLARDIYKDPDYVRKGSARLP 239 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCc-EEEeecccccccccCcchhcccCCCCC
Confidence 234778889999999999999999999999999999999998876 99999999876432211 11122345
Q ss_pred ccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCc
Q psy6391 180 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS 258 (313)
Q Consensus 180 ~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (313)
..|+|||.+.+. .++.++||||||+++|+|++ |..||..................+..
T Consensus 240 ~~y~aPE~~~~~-~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------- 298 (338)
T cd05102 240 LKWMAPESIFDK-VYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRA-------------------- 298 (338)
T ss_pred ccccCcHHhhcC-CCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCC--------------------
Confidence 679999998654 47999999999999999997 99999876543333332221110000
Q ss_pred hhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 259 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 259 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...+++++.+++.+||+.||.+|||+.++++
T Consensus 299 -------~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 299 -------PENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred -------CCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 0246789999999999999999999999975
No 199
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=9.9e-43 Score=304.17 Aligned_cols=287 Identities=40% Similarity=0.696 Sum_probs=221.5
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEeC--cE
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIEN--YR 87 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~--~~ 87 (313)
...++|++.+.||.|++|.||+|.+..++..+++|.+............+.+|+.+++++ +|+||+++++++... ..
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 356789999999999999999999988899999998865432322335677899999999 999999999998643 47
Q ss_pred EEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 88 LYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 88 ~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
.++|+||++++|...+... .+++..++.++.||+.+|.+||+.|++|+||+|+||+++.++. ++|+|||.+....
T Consensus 84 ~~lv~e~~~~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~-~kl~d~g~~~~~~ 158 (337)
T cd07852 84 IYLVFEYMETDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCR-VKLADFGLARSLS 158 (337)
T ss_pred EEEEecccccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCc-EEEeeccchhccc
Confidence 8999999999888777642 5788899999999999999999999999999999999999887 9999999887653
Q ss_pred CCC-----cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCC
Q psy6391 168 VPV-----RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 242 (313)
Q Consensus 168 ~~~-----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
... .......++..|+|||.+.+....+.++|+||+|+++|++++|+.||..........++......+....+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIE 238 (337)
T ss_pred cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 322 122234578889999988665667899999999999999999999999887777777766654443322111
Q ss_pred CCCCC--CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 243 GVSKL--PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 243 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
.+... ..+................+.++.++.++|.+||+.||++|||+.++++||||++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~ 300 (337)
T cd07852 239 SIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ 300 (337)
T ss_pred HHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhh
Confidence 11000 0000001111111122233458999999999999999999999999999999977
No 200
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=6.1e-42 Score=292.44 Aligned_cols=263 Identities=26% Similarity=0.428 Sum_probs=208.7
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEE---
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMI--- 83 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~--- 83 (313)
......++|++.+.||+|++|.||++.+..+++.+++|++..... ....+.+|+.+++.+ +|+|++++++++.
T Consensus 12 ~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 12 SFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD---IDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred cCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc---hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 445678899999999999999999999998999999998764322 135678899999999 6999999999874
Q ss_pred --eCcEEEEEEecccc-CHHHHHhhC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEec
Q psy6391 84 --ENYRLYLIFEFMSM-DLKKYIDTV-PKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVAD 159 (313)
Q Consensus 84 --~~~~~~lv~e~~~~-~l~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~d 159 (313)
.++..++||||+++ +|.+++... .....+++..++.++.|++.+|.|||+.+++|+||+|+||+++.++. ++|+|
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~-~kl~d 167 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGG-VKLVD 167 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCC-EEEcc
Confidence 44678999999975 777766532 23456889999999999999999999999999999999999998877 99999
Q ss_pred CCCccccCCCCcccccccccccccchhhhcC----CCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCC
Q psy6391 160 FGLARAFGVPVRIYTHEVVTLWYRAPEVLLG----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT 235 (313)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~----~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~ 235 (313)
||.+..............|+..|+|||.+.. ...++.++|+||+|+++|+|++|+.||................
T Consensus 168 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~-- 245 (286)
T cd06638 168 FGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNP-- 245 (286)
T ss_pred CCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccC--
Confidence 9998765433222234467889999998753 2346889999999999999999999998765543332221110
Q ss_pred CCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 236 PTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
+... ..+ ...+..+.++|.+||+.||++|||+.|+++|+||
T Consensus 246 ~~~~-------------~~~-----------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 246 PPTL-------------HQP-----------ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred CCcc-------------cCC-----------CCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 0000 000 1256789999999999999999999999999997
No 201
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=9.2e-42 Score=296.66 Aligned_cols=288 Identities=36% Similarity=0.623 Sum_probs=221.0
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEe-CcEEE
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIE-NYRLY 89 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~ 89 (313)
...++|++.+.||.|++|.||++.+..+++.+++|.+............+.+|+.+++.++|||++++.+++.. ....+
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY 86 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence 35678999999999999999999999999999999987654444445778899999999999999999999875 56789
Q ss_pred EEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 90 LIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 90 lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
+++|+++++|...+.. .++++..+..++.||+.+|.+||+.|++|+||+|+||+++.++. ++|+|||.+......
T Consensus 87 lv~e~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~-~~l~dfg~~~~~~~~ 161 (328)
T cd07856 87 FVTELLGTDLHRLLTS----RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCD-LKICDFGLARIQDPQ 161 (328)
T ss_pred EEeehhccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCC-EEeCccccccccCCC
Confidence 9999998888777653 34788889999999999999999999999999999999998876 999999998754322
Q ss_pred CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC--C
Q psy6391 170 VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK--L 247 (313)
Q Consensus 170 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 247 (313)
. ....++..|+|||.+.+...++.++|+||+|+++|++++|+.||...........+.+..+.++.+....... .
T Consensus 162 ~---~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd07856 162 M---TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENT 238 (328)
T ss_pred c---CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhh
Confidence 1 2345678899999876645689999999999999999999999988776555544444333332211100000 0
Q ss_pred CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCC
Q psy6391 248 PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL 306 (313)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~ 306 (313)
.++....+...........+.++.++.++|.+||+.+|++||++.+++.||||....++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~ 297 (328)
T cd07856 239 LRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDP 297 (328)
T ss_pred HHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCC
Confidence 00000011101111112234678999999999999999999999999999999876554
No 202
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.4e-41 Score=293.32 Aligned_cols=279 Identities=23% Similarity=0.403 Sum_probs=209.4
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
++|++.+.||+|++|.||++.+..++..+++|.+..... ......+.+|++++++++||||+++++++.+++.+++++|
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK-PAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence 479999999999999999999998999999998865322 2223567889999999999999999999999999999999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHK-RRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~-~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
|+++ +|.+++... +.+++..+..++.|++.+|.|||+ .+++|+||+|+||+++.++. ++|+|||.+.......
T Consensus 80 y~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~-~~l~dfg~~~~~~~~~- 154 (308)
T cd06615 80 HMDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGE-IKLCDFGVSGQLIDSM- 154 (308)
T ss_pred ccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCc-EEEccCCCcccccccc-
Confidence 9985 888887653 458999999999999999999997 59999999999999998876 9999999886543221
Q ss_pred ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCC-CCCCCCCCCCCc
Q psy6391 172 IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTE-DNWPGVSKLPDY 250 (313)
Q Consensus 172 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 250 (313)
.....++..|+|||.+.+. .++.++|+||+|+++|++++|..||...+.... ............ ..... .....
T Consensus 155 -~~~~~~~~~~~aPE~~~~~-~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~ 229 (308)
T cd06615 155 -ANSFVGTRSYMSPERLQGT-HYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKEL-EAMFGRPVSEGEAKESHR--PVSGH 229 (308)
T ss_pred -cccCCCCcCccChhHhcCC-CCCccchHHHHHHHHHHHHhCCCCCCCcchhhH-HHhhcCccccccccCCcc--cccCC
Confidence 2334678899999988654 478999999999999999999999976654332 222211110000 00000 00000
Q ss_pred cccCCCCc------hhhhh---hh--ccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 251 KTTFPEWS------NFCLD---KH--VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 251 ~~~~~~~~------~~~~~---~~--~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
....+... ..... .. ...++.++.+|+.+||+.||++||++.+++.||||.+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 230 PPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred CCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 00000000 00000 00 01367889999999999999999999999999999874
No 203
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.9e-42 Score=292.27 Aligned_cols=256 Identities=27% Similarity=0.489 Sum_probs=209.5
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
++|++.+.||.|++|.||++.++.+++.+++|.+...... .....+.+|++++++++||||+++++.+..++.+++++|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE-AIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME 79 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh-HHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence 4788899999999999999999989999999998765432 334678899999999999999999999999999999999
Q ss_pred ccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 94 FMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHK-RRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 94 ~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~-~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
+++ ++|.+++.... ..+++..++.++.|++.++.+||+ .|++|+||+|+||+++.++. ++|+|||.+........
T Consensus 80 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~-~~l~d~g~~~~~~~~~~ 156 (265)
T cd06605 80 YMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQ-IKLCDFGVSGQLVNSLA 156 (265)
T ss_pred ecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCC-EEEeecccchhhHHHHh
Confidence 999 58888887642 468999999999999999999999 99999999999999999876 99999999876533222
Q ss_pred ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 172 IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS-----EIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 172 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
. ...++..|+|||.+.+. .++.++|+||+|++++++++|..||.... ..+........ .. ...+.
T Consensus 157 ~--~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~--- 226 (265)
T cd06605 157 K--TFVGTSSYMAPERIQGN-DYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE---PP-PRLPS--- 226 (265)
T ss_pred h--cccCChhccCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC---CC-CCCCh---
Confidence 1 25678889999988664 58999999999999999999999997542 12222222111 10 00000
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
..++.++.++|.+||..||++|||+.+++.||||+.-
T Consensus 227 --------------------~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 227 --------------------GKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred --------------------hhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 1167899999999999999999999999999999863
No 204
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=4.9e-42 Score=296.01 Aligned_cols=259 Identities=26% Similarity=0.440 Sum_probs=212.1
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
...|++.+.||.|++|.||.|.+..+++.|++|.+...... ......+.+|+.+++.++|||++++++++.+++..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 35699999999999999999999888999999998654322 22235678999999999999999999999999999999
Q ss_pred EeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 92 FEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 92 ~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
+||+.|++.+.+... ...+++..+..++.||+.+|.|||+.|++|+||+|+||+++.++. ++|+|||++......
T Consensus 94 ~e~~~g~l~~~~~~~--~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~-~kL~dfg~~~~~~~~-- 168 (307)
T cd06607 94 MEYCLGSASDILEVH--KKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGT-VKLADFGSASLVSPA-- 168 (307)
T ss_pred HHhhCCCHHHHHHHc--ccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCC-EEEeecCcceecCCC--
Confidence 999999888877643 235899999999999999999999999999999999999998877 999999988665432
Q ss_pred ccccccccccccchhhhcC--CCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy6391 172 IYTHEVVTLWYRAPEVLLG--SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 249 (313)
Q Consensus 172 ~~~~~~~~~~~~~PE~~~~--~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (313)
....++..|+|||.+.+ ...++.++|+||+|+++|++++|..||...+.............+...
T Consensus 169 --~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~----------- 235 (307)
T cd06607 169 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLS----------- 235 (307)
T ss_pred --CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCC-----------
Confidence 23456778999998742 345788999999999999999999999877665544433221000000
Q ss_pred ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCC
Q psy6391 250 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 305 (313)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~ 305 (313)
....+.++.++|.+||+.||.+||++.+++.||||.....
T Consensus 236 ----------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 275 (307)
T cd06607 236 ----------------SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRERP 275 (307)
T ss_pred ----------------chhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccCC
Confidence 0135788999999999999999999999999999988543
No 205
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.4e-41 Score=285.51 Aligned_cols=256 Identities=29% Similarity=0.556 Sum_probs=216.5
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEec
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
+|.+.+.||.|++|.||++.+..++..+++|++............+.+|+++++.++|+|++++++.+...+..++++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 58999999999999999999998899999999987655444457788999999999999999999999999999999999
Q ss_pred ccc-CHHHHHhhCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 95 MSM-DLKKYIDTVP-KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 95 ~~~-~l~~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
+++ +|.+.+.... ....+++..+..++.+++.++.+||+.|++|+||+|+||+++.++. ++|+|||.+.........
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~-~~l~d~~~~~~~~~~~~~ 159 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGL-VKLGDFGISKVLSSTVDL 159 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCc-EEECCccceeecccCcce
Confidence 986 8888877632 2456899999999999999999999999999999999999998876 999999999876554333
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
.....++..|+|||.+.... .+.++|+||+|++++++++|..||..................+..
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------- 224 (258)
T cd08215 160 AKTVVGTPYYLSPELCQNKP-YNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIP-------------- 224 (258)
T ss_pred ecceeeeecccChhHhccCC-CCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCC--------------
Confidence 34456788899999876544 789999999999999999999999877765555554332111100
Q ss_pred cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 253 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
..++.++.+++.+||+.+|++||++.++|+||||
T Consensus 225 --------------~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 225 --------------SQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred --------------CCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 1367899999999999999999999999999997
No 206
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1e-41 Score=286.29 Aligned_cols=252 Identities=26% Similarity=0.469 Sum_probs=209.5
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEec
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
+|++.+.||.|++|.||.+.+..+++.+++|.++..... ...+.+.+|+.+++.++|+|++++++.+.+++..++++||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSS-SAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcch-HHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence 589999999999999999999999999999998654322 2346788899999999999999999999999999999999
Q ss_pred ccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccc
Q psy6391 95 MSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIY 173 (313)
Q Consensus 95 ~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~ 173 (313)
+++ +|.+.+... ....+++..+..++.||+.||.+||+.|++|+||+|+||+++.++. ++++|||.+..........
T Consensus 80 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~-~~l~dfg~~~~~~~~~~~~ 157 (255)
T cd08219 80 CDGGDLMQKIKLQ-RGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGK-VKLGDFGSARLLTSPGAYA 157 (255)
T ss_pred CCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCc-EEEcccCcceeeccccccc
Confidence 975 777776542 3445889999999999999999999999999999999999998876 9999999987664433333
Q ss_pred ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcccc
Q psy6391 174 THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT 253 (313)
Q Consensus 174 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (313)
....++..|+|||++.+. ..+.++|+||+|+++|+|++|..||...+.......+......+.+
T Consensus 158 ~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------- 221 (255)
T cd08219 158 CTYVGTPYYVPPEIWENM-PYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLP--------------- 221 (255)
T ss_pred ccccCCccccCHHHHccC-CcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCC---------------
Confidence 345678889999998664 4889999999999999999999999987766665555432211111
Q ss_pred CCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCC
Q psy6391 254 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHK 298 (313)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~ 298 (313)
..++..+.++|.+||+.||.+||++.++++--
T Consensus 222 -------------~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~ 253 (255)
T cd08219 222 -------------SHYSYELRSLIKQMFKRNPRSRPSATTILSRG 253 (255)
T ss_pred -------------cccCHHHHHHHHHHHhCCcccCCCHHHHhhcc
Confidence 13678899999999999999999999998743
No 207
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.4e-41 Score=286.83 Aligned_cols=257 Identities=29% Similarity=0.509 Sum_probs=208.7
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEec
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
+|++.+.||+|++|.||.+.+..+++.+++|.++...........+.+|+.+++.++|++|+++++.+...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 68999999999999999999988899999999987654433457888999999999999999999999999999999999
Q ss_pred ccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccc
Q psy6391 95 MSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIY 173 (313)
Q Consensus 95 ~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~ 173 (313)
+++ +|.+.+.. ...+++..++.++.+++.++.+||+.|++|+||+|+||+++.++. ++|+|||.+..........
T Consensus 81 ~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~-~kl~d~g~~~~~~~~~~~~ 156 (264)
T cd06626 81 CSGGTLEELLEH---GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGV-IKLGDFGCAVKLKNNTTTM 156 (264)
T ss_pred CCCCcHHHHHhh---cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC-EEEcccccccccCCCCCcc
Confidence 985 78777764 334789999999999999999999999999999999999998776 9999999987764432221
Q ss_pred c----cccccccccchhhhcCCC--CCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCC
Q psy6391 174 T----HEVVTLWYRAPEVLLGSQ--RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 247 (313)
Q Consensus 174 ~----~~~~~~~~~~PE~~~~~~--~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
. ...++..|+|||.+.... ..+.++|+||+|++++++++|..||..................+..+.
T Consensus 157 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------- 229 (264)
T cd06626 157 GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPD------- 229 (264)
T ss_pred cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCc-------
Confidence 1 245678899999986533 378899999999999999999999976543222222221111111000
Q ss_pred CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 248 PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
...++..+.++|.+||+.+|.+||++.+++.|||+
T Consensus 230 ------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 230 ------------------SLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred ------------------ccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 01357899999999999999999999999999997
No 208
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.5e-41 Score=286.95 Aligned_cols=254 Identities=26% Similarity=0.438 Sum_probs=205.2
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCC----CCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDE----GIPATAIREISVLKELNHPNIVQLHDTMIENYRLYL 90 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 90 (313)
+|++.+.||.|++|.||+|... +++.+++|.+....... .....+.+|+.+++.++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 5889999999999999999875 78899999887543221 112457889999999999999999999999999999
Q ss_pred EEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 91 IFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 91 v~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
++||+.+ +|.+.+... ..+++..++.++.|++.+|.+||+.|++|+||+|+||+++.++. ++|+|||.+......
T Consensus 80 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~-~~l~dfg~~~~~~~~ 155 (265)
T cd06631 80 FMEFVPGGSISSILNRF---GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGI-IKLIDFGCARRLAWV 155 (265)
T ss_pred EEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCe-EEeccchhhHhhhhc
Confidence 9999976 787777642 35889999999999999999999999999999999999998876 999999988754211
Q ss_pred ------CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCC
Q psy6391 170 ------VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 170 ------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
........++..|+|||.+.+.. .+.++|+||||+++|++++|..||...+.......+........ .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~--- 229 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESG-YGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMP--R--- 229 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCC-CcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCC--C---
Confidence 11122345788899999987644 78999999999999999999999987665544433322111100 0
Q ss_pred CCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 244 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
....++.++.++|.+||+.+|.+||++.++++||||
T Consensus 230 ---------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 230 ---------------------LPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred ---------------------CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 002478999999999999999999999999999997
No 209
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=7.8e-42 Score=291.85 Aligned_cols=267 Identities=31% Similarity=0.511 Sum_probs=221.2
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEE
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYL 90 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 90 (313)
...+.|++...||.|++|.||.+.+..++..+++|++..... ....+.+|+.+++.++|+|++++++.+..++..++
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence 456778999999999999999999998899999999976544 34678899999999999999999999999999999
Q ss_pred EEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 91 IFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 91 v~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
++||++ ++|.+++.... ..+++..+..++.|++.+|.+||+.|++|+||+|+||+++.++. ++|+|||.+......
T Consensus 93 v~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~-~~l~d~~~~~~~~~~ 169 (286)
T cd06614 93 VMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGS-VKLADFGFAAQLTKE 169 (286)
T ss_pred EEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCC-EEECccchhhhhccc
Confidence 999999 58988887633 35899999999999999999999999999999999999998876 999999988765433
Q ss_pred CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy6391 170 VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 249 (313)
Q Consensus 170 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (313)
........++..|+|||.+.+. ..+.++|+||+|+++|++++|..||...........+........ ..
T Consensus 170 ~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~--------- 238 (286)
T cd06614 170 KSKRNSVVGTPYWMAPEVIKRK-DYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPL-KN--------- 238 (286)
T ss_pred hhhhccccCCcccCCHhHhcCC-CCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC-cc---------
Confidence 3222334567889999988654 478999999999999999999999987766555444332111100 00
Q ss_pred ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCCCcc
Q psy6391 250 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFA 310 (313)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~~~~ 310 (313)
...++.++.++|.+||+.+|.+||++.++++|+||++....++..
T Consensus 239 ----------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~~~ 283 (286)
T cd06614 239 ----------------PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACPKEEFA 283 (286)
T ss_pred ----------------hhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccCchHhhh
Confidence 023678999999999999999999999999999999976666554
No 210
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4.6e-42 Score=291.95 Aligned_cols=259 Identities=25% Similarity=0.435 Sum_probs=211.8
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
..|+.++.||.|++|.||.|.+..++..+++|++...... .....+.+|+.+++.++|++++++++.+.++...++|||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIME 82 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEe
Confidence 5688899999999999999999888999999998754322 223678889999999999999999999999999999999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
|+++ +|.+.+.. .++++.++..++.|++.++.+||+.+++|+||+|+||+++.++. ++++|||.+.........
T Consensus 83 ~~~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~-~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06640 83 YLGGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGD-VKLADFGVAGQLTDTQIK 157 (277)
T ss_pred cCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCC-EEEcccccceeccCCccc
Confidence 9986 77777653 34889999999999999999999999999999999999998876 999999998765443322
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
.....++..|+|||.+.+.. .+.++|+||||+++|+|++|..||...........+... ..+
T Consensus 158 ~~~~~~~~~y~apE~~~~~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~-~~~---------------- 219 (277)
T cd06640 158 RNTFVGTPFWMAPEVIQQSA-YDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKN-NPP---------------- 219 (277)
T ss_pred cccccCcccccCHhHhccCC-CccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcC-CCC----------------
Confidence 23345778899999886544 789999999999999999999999876654443322110 000
Q ss_pred cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCC
Q psy6391 253 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP 307 (313)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~ 307 (313)
.....++..+.+++.+||+.+|.+||++.+++.||||......+
T Consensus 220 -----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~ 263 (277)
T cd06640 220 -----------TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAKKT 263 (277)
T ss_pred -----------CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcchhh
Confidence 00023678899999999999999999999999999998865443
No 211
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.9e-41 Score=284.94 Aligned_cols=254 Identities=30% Similarity=0.493 Sum_probs=208.6
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC---CCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD---EGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
+|+..+.||.|++|.||+|....++..|++|.+...... ....+.+.+|+.+++.++|++++++++++.++..++++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 578889999999999999999888999999998654422 22345788899999999999999999999999999999
Q ss_pred Eecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCC
Q psy6391 92 FEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV 170 (313)
Q Consensus 92 ~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~ 170 (313)
+||+++ +|.+++... ..+++..+..++.||+.++.+||+.|++|+||+|+||+++.++. ++|+|||.+.......
T Consensus 81 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~-~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 81 LELVPGGSLAKLLKKY---GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGV-VKLADFGMAKQVVEFS 156 (258)
T ss_pred EEecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC-EEEccCccceeccccc
Confidence 999986 888877653 34889999999999999999999999999999999999998876 9999999987654332
Q ss_pred cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCc
Q psy6391 171 RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY 250 (313)
Q Consensus 171 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (313)
......++..|++||.+.....++.++|+||+|+++|++++|..||..................+. .
T Consensus 157 -~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---~--------- 223 (258)
T cd06632 157 -FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPP---I--------- 223 (258)
T ss_pred -cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCC---c---------
Confidence 223446788899999886544478999999999999999999999987664444333322111100 0
Q ss_pred cccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 251 KTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
...++.++.+++.+||+.+|++||++.+++.|||+
T Consensus 224 ---------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 224 ---------------PDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred ---------------CCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 02467999999999999999999999999999997
No 212
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=4.9e-42 Score=288.69 Aligned_cols=252 Identities=28% Similarity=0.450 Sum_probs=209.2
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCC-CCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDE-GIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
+|++.+.||.|++|.||++.+..++..+++|++....... .....+.+|++++++++||||+++++.+..+...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 5899999999999999999999889999999997654322 345778899999999999999999999999999999999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
|+.| +|...+... .++++..+..++.||+.+|.+||+.|++|+||+|+||+++.++. ++|+|||.+....... .
T Consensus 81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~-~~l~d~~~~~~~~~~~-~ 155 (258)
T cd05578 81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGH-VHITDFNIATKVTPDT-L 155 (258)
T ss_pred CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCC-EEEeecccccccCCCc-c
Confidence 9976 777777653 45899999999999999999999999999999999999999877 9999999987764332 2
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHhcCCCCCCCCCCCCCCCCc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI--DQLFRIFRVLTTPTEDNWPGVSKLPDY 250 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (313)
.....++..|+|||.+.... .+.++|+||+|+++|++++|..||...... ..............
T Consensus 156 ~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------- 221 (258)
T cd05578 156 TTSTSGTPGYMAPEVLCRQG-YSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLY------------- 221 (258)
T ss_pred ccccCCChhhcCHHHHcccC-CCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccC-------------
Confidence 23456788899999886644 899999999999999999999999977642 22211111100000
Q ss_pred cccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCH--HHHhcCCCC
Q psy6391 251 KTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINA--ENALKHKYF 300 (313)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~--~e~l~h~~~ 300 (313)
...++.++.++|.+||+.||.+||++ .|+++||||
T Consensus 222 ---------------~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 222 ---------------PATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred ---------------cccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 02467999999999999999999999 999999998
No 213
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1e-41 Score=297.17 Aligned_cols=285 Identities=41% Similarity=0.660 Sum_probs=220.7
Q ss_pred cceeeeeeccccceEEEEEEeCcC--CcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEeC----cE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVT--GALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIEN----YR 87 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~--~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~----~~ 87 (313)
+|++.+.||+|++|.||++.+..+ +..|++|.+............+.+|+.+++++ +|+||+++++..... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 588999999999999999999877 88999999875443333346678899999999 599999999875432 46
Q ss_pred EEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 88 LYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 88 ~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
.++++++++++|.+.+.. ...+++..++.++.||+.||.|||+.|++|+||||+||+++.++. ++|+|||.+....
T Consensus 81 ~~~~~e~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~-~kl~Dfg~a~~~~ 156 (332)
T cd07857 81 LYLYEELMEADLHQIIRS---GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCE-LKICDFGLARGFS 156 (332)
T ss_pred EEEEEecccCCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCC-EEeCcCCCceecc
Confidence 789999999988887753 445899999999999999999999999999999999999998877 9999999987653
Q ss_pred CCCc----ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCC
Q psy6391 168 VPVR----IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 168 ~~~~----~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
.... ......|+..|+|||.+.+....+.++|+||+|+++|++++|..||...+.......+....+.+....+..
T Consensus 157 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (332)
T cd07857 157 ENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSR 236 (332)
T ss_pred cccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 2211 112346788899999886655578999999999999999999999998888777777777665544332221
Q ss_pred CCCCCC--ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 244 VSKLPD--YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 244 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
...... +................+.++..+.+++.+||+.||.+|||+.+++.||||.+-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~ 298 (332)
T cd07857 237 IGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW 298 (332)
T ss_pred hhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence 111000 000011111112222335678999999999999999999999999999999853
No 214
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2e-41 Score=287.17 Aligned_cols=259 Identities=29% Similarity=0.490 Sum_probs=206.0
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCC--------CchhHHHHHHHHhhcCCCCceeeceeEEeCc
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEG--------IPATAIREISVLKELNHPNIVQLHDTMIENY 86 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~--------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 86 (313)
+|.+.+.||.|++|.||+|.+..+++.+++|.++....... ..+.+.+|+.+++.++|+|++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 58899999999999999999988899999998864322111 1245778999999999999999999999999
Q ss_pred EEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 87 RLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 87 ~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
..++|+||+.+ +|.+.+... ..+++..+..++.||+.+|.+||+.|++|+||+|+||+++.++. ++++|||.+..
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~-~~l~d~~~~~~ 157 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGI-CKISDFGISKK 157 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCe-EEEeecccccc
Confidence 99999999975 787777653 45899999999999999999999999999999999999998876 99999999876
Q ss_pred cCCCCc--ccccccccccccchhhhcCCC-CCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCC
Q psy6391 166 FGVPVR--IYTHEVVTLWYRAPEVLLGSQ-RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 242 (313)
Q Consensus 166 ~~~~~~--~~~~~~~~~~~~~PE~~~~~~-~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
...... ......++..|+|||.+.... .++.++|+||||++++++++|..||..................+ .++
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~ 234 (272)
T cd06629 158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAP---PIP 234 (272)
T ss_pred ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCC---cCC
Confidence 432211 122345678899999986543 47899999999999999999999997655443333322111000 000
Q ss_pred CCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 243 GVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
......++.++.++|.+||+.+|++||++.++|+||||
T Consensus 235 --------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 235 --------------------PDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred --------------------ccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 00113478999999999999999999999999999997
No 215
>KOG0669|consensus
Probab=100.00 E-value=5.8e-44 Score=280.36 Aligned_cols=293 Identities=41% Similarity=0.736 Sum_probs=249.1
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEE----
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMI---- 83 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~---- 83 (313)
..-+..+.|+-..++|+|.||.||+++.+.+|+.|++|.+-.............+|+.+|+.+.|+|++.++++|.
T Consensus 11 P~~~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~T 90 (376)
T KOG0669|consen 11 PFCDEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKAT 90 (376)
T ss_pred CceecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccC
Confidence 3345677888899999999999999999999999999988877777777788999999999999999999999886
Q ss_pred ----eCcEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEec
Q psy6391 84 ----ENYRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVAD 159 (313)
Q Consensus 84 ----~~~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~d 159 (313)
+...+++||.++..+|.-++... ...++...+..+..++..+|.|+|...|+|+|+|++|+|++.+|. ++|+|
T Consensus 91 p~~r~r~t~ylVf~~cehDLaGlLsn~--~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgi-lklAD 167 (376)
T KOG0669|consen 91 PTNRDRATFYLVFDFCEHDLAGLLSNR--KVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGI-LKLAD 167 (376)
T ss_pred CcccccceeeeeHHHhhhhHHHHhcCc--cccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCce-EEeec
Confidence 23468999999999888888763 345899999999999999999999999999999999999999876 99999
Q ss_pred CCCccccCCC----CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCC
Q psy6391 160 FGLARAFGVP----VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT 235 (313)
Q Consensus 160 f~~~~~~~~~----~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~ 235 (313)
||++.....+ ...++..+-|.+|.+||.+.+...++++.|||+.||++.+|+++.+-++.+....++..+...-+.
T Consensus 168 FGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs 247 (376)
T KOG0669|consen 168 FGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGS 247 (376)
T ss_pred cccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhcc
Confidence 9999554222 222344566999999999999989999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccc----CCCCchhhhhhhcc--CCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 236 PTEDNWPGVSKLPDYKTT----FPEWSNFCLDKHVK--NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~--~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
...+-|++++.++-...- .++.....++.... .-.+++.+|+.++|..||++|++++++|+|.||...
T Consensus 248 ~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kd 321 (376)
T KOG0669|consen 248 ITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKD 321 (376)
T ss_pred CCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcC
Confidence 999999999988654433 33333333332221 236789999999999999999999999999999873
No 216
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.7e-41 Score=286.16 Aligned_cols=256 Identities=29% Similarity=0.493 Sum_probs=213.6
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
++|++.+.||.|++|.||++.+..+++.+++|.+...... .....+.+|+..+++++|++++++++++..++..++|+|
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence 4789999999999999999999989999999998765432 334778899999999999999999999999999999999
Q ss_pred ccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 94 FMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHK-RRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 94 ~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~-~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
|++ ++|.+.+... ..+++..++.++.|++.++.+||+ .|++|+||+|+||+++.++. ++|+|||.+........
T Consensus 80 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~-~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 80 YMDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGE-VKIADFGISKVLENTLD 155 (264)
T ss_pred ecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCC-EEEccCccceecccCCC
Confidence 999 5888887753 458999999999999999999999 99999999999999999877 99999999887654433
Q ss_pred ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy6391 172 IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS---EIDQLFRIFRVLTTPTEDNWPGVSKLP 248 (313)
Q Consensus 172 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
......++..|+|||.+... .++.++|+||||+++|++++|..||.... .......+... .... .
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~-~------- 223 (264)
T cd06623 156 QCNTFVGTVTYMSPERIQGE-SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDG---PPPS-L------- 223 (264)
T ss_pred cccceeecccccCHhhhCCC-CCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcC---CCCC-C-------
Confidence 33344678889999988664 58899999999999999999999998774 22323222211 1000 0
Q ss_pred CccccCCCCchhhhhhhccC-CCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 249 DYKTTFPEWSNFCLDKHVKN-LDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
... ++..+.++|.+||+.+|++||++.++++||||+..
T Consensus 224 -----------------~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 224 -----------------PAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred -----------------CcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 012 67899999999999999999999999999999764
No 217
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.4e-41 Score=291.70 Aligned_cols=260 Identities=25% Similarity=0.447 Sum_probs=211.4
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEec
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
-|.....||.|++|.||.+.+..+++.|++|.+...... ....+.+|+.+++.++|||++++++.+..++..++++||
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~ 99 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEF 99 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccc--hHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEec
Confidence 344556899999999999999888999999998654322 246688999999999999999999999999999999999
Q ss_pred ccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccc
Q psy6391 95 MSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIY 173 (313)
Q Consensus 95 ~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~ 173 (313)
+++ +|...+.. ..+++..++.++.|++.+|.+||+.|++|+||+|+||+++.++. ++|+|||++..........
T Consensus 100 ~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~-~kL~dfg~~~~~~~~~~~~ 174 (297)
T cd06659 100 LQGGALTDIVSQ----TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGR-VKLSDFGFCAQISKDVPKR 174 (297)
T ss_pred CCCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCc-EEEeechhHhhcccccccc
Confidence 986 66665533 34889999999999999999999999999999999999998877 9999999987654433333
Q ss_pred ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcccc
Q psy6391 174 THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT 253 (313)
Q Consensus 174 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (313)
....++..|+|||.+.+.. ++.++|+||+|+++|+|++|+.||...........+...... .+.
T Consensus 175 ~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~----~~~----------- 238 (297)
T cd06659 175 KSLVGTPYWMAPEVISRTP-YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPP----KLK----------- 238 (297)
T ss_pred cceecCccccCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCC----Ccc-----------
Confidence 3456788999999986644 789999999999999999999999877665555443221100 000
Q ss_pred CCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCCC
Q psy6391 254 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 308 (313)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~~ 308 (313)
....++..+.++|.+||+.+|.+||++.++++||||.+...+++
T Consensus 239 -----------~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~~~~ 282 (297)
T cd06659 239 -----------NAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGLPEC 282 (297)
T ss_pred -----------ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCCccc
Confidence 01246789999999999999999999999999999998755443
No 218
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=3.6e-41 Score=282.49 Aligned_cols=253 Identities=33% Similarity=0.523 Sum_probs=213.8
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEec
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
+|++.+.||+|++|.||++.+..+++.|++|.+............+.+|++++++++|++++++++++.+++..++++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 58899999999999999999998899999999987654334456788999999999999999999999999999999999
Q ss_pred ccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccc
Q psy6391 95 MSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIY 173 (313)
Q Consensus 95 ~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~ 173 (313)
+++ +|.+.+... ..+++..++.++.|++.++.+||+.|++|+||+|+||+++.++. ++|+|||.+..........
T Consensus 81 ~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~-~~l~d~~~~~~~~~~~~~~ 156 (254)
T cd06627 81 AENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGV-VKLADFGVATKLNDVSKDD 156 (254)
T ss_pred CCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCC-EEEeccccceecCCCcccc
Confidence 986 787777653 45899999999999999999999999999999999999998766 9999999998776554433
Q ss_pred ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcccc
Q psy6391 174 THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT 253 (313)
Q Consensus 174 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (313)
....++..|+|||...... .+.++|+|++|++++++++|..||..................+.
T Consensus 157 ~~~~~~~~y~~pe~~~~~~-~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---------------- 219 (254)
T cd06627 157 ASVVGTPYWMAPEVIEMSG-ASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPL---------------- 219 (254)
T ss_pred cccccchhhcCHhhhcCCC-CCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCC----------------
Confidence 4456788899999886644 78999999999999999999999987665444443322111110
Q ss_pred CCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 254 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
...++..+.+++.+||+.+|++||++.+++.||||
T Consensus 220 ------------~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 220 ------------PEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred ------------CCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 02467999999999999999999999999999997
No 219
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.1e-41 Score=285.16 Aligned_cols=254 Identities=26% Similarity=0.458 Sum_probs=202.7
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCC---CchhHHHHHHHHhhcCCCCceeeceeEEe--CcEEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEG---IPATAIREISVLKELNHPNIVQLHDTMIE--NYRLY 89 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~ 89 (313)
+|++.+.||+|++|.||++.+..++..|++|.+........ ....+.+|+.+++.++|+||+++++++.+ +...+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 68999999999999999999998899999999875542221 22457789999999999999999999875 36789
Q ss_pred EEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCC
Q psy6391 90 LIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGV 168 (313)
Q Consensus 90 lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~ 168 (313)
+++||+++ +|.+.+.. ...+++..++.++.|++.+|.+||+.|++|+||+|+||+++.++. ++|+|||++.....
T Consensus 83 l~~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~-~~l~dfg~~~~~~~ 158 (266)
T cd06651 83 IFMEYMPGGSVKDQLKA---YGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGN-VKLGDFGASKRLQT 158 (266)
T ss_pred EEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCC-EEEccCCCcccccc
Confidence 99999975 78877764 234889999999999999999999999999999999999998876 99999999865432
Q ss_pred CC---cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCC
Q psy6391 169 PV---RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 245 (313)
Q Consensus 169 ~~---~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
.. .......++..|+|||.+.+. ..+.++|+||+|+++|++++|+.||................ ....+
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~---~~~~~---- 230 (266)
T cd06651 159 ICMSGTGIRSVTGTPYWMSPEVISGE-GYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQP---TNPQL---- 230 (266)
T ss_pred ccccCCccccCCccccccCHHHhCCC-CCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCC---CCCCC----
Confidence 11 111223467889999998664 47899999999999999999999998765544443332211 11100
Q ss_pred CCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCC
Q psy6391 246 KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA 301 (313)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~ 301 (313)
+ ..+++.+.+++ .|+..+|++||++.|+++||||+
T Consensus 231 ---------~-----------~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 231 ---------P-----------SHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred ---------c-----------hhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 0 13678888898 68888999999999999999996
No 220
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.5e-41 Score=287.14 Aligned_cols=255 Identities=29% Similarity=0.485 Sum_probs=206.0
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccC-CCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEN-DDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
+++|++.+.||+|++|.||+|++..+++.|++|.+.... ........+.+|+.+++.++|||++++++++.+.+..+++
T Consensus 1 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 1 LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred CcceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEE
Confidence 468999999999999999999999899999999886533 2223335678899999999999999999999999999999
Q ss_pred Eecccc-CHHHHHhhCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 92 FEFMSM-DLKKYIDTVP-KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 92 ~e~~~~-~l~~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
+||+++ +|.+++.... ....+++..+..++.||+.||.|||++|++|+||+|+||+++.++. ++|+|||.+......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~-~~l~d~g~~~~~~~~ 159 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGV-VKLGDLGLGRFFSSK 159 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCC-EEECccccceeccch
Confidence 999985 8877776433 2345889999999999999999999999999999999999998877 999999998776543
Q ss_pred CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHhcCCCCCCCCCCCCCC
Q psy6391 170 VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE--IDQLFRIFRVLTTPTEDNWPGVSKL 247 (313)
Q Consensus 170 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
........++..|+|||.+.+.. .+.++|+||+|+++|++++|..||..... ......+.. ...+...
T Consensus 160 ~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~-------- 229 (267)
T cd08228 160 TTAAHSLVGTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQ-CDYPPLP-------- 229 (267)
T ss_pred hHHHhcCCCCccccChhhhccCC-CCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhc-CCCCCCC--------
Confidence 33333446788899999887644 78899999999999999999999975532 222222221 1111100
Q ss_pred CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 248 PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...++..+.+++.+||+.+|++||++.++++
T Consensus 230 ------------------~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 230 ------------------TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred ------------------hhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 0136788999999999999999999999986
No 221
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=7e-42 Score=292.42 Aligned_cols=265 Identities=23% Similarity=0.406 Sum_probs=208.3
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcC-CCCceeeceeEEeCcEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELN-HPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv 91 (313)
.++|...+.||+|++|.||++.+..+++.+++|.+...... .....+.+|+.++.++. |+||+++++++..++..+++
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~ 81 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWIC 81 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEE
Confidence 45778889999999999999999999999999998754432 22356788999999995 99999999999999999999
Q ss_pred EeccccCHHHHHhhC--CCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCCEEEecCCCeEEEecCCCccccCC
Q psy6391 92 FEFMSMDLKKYIDTV--PKGQFLAADKVKSITYQIFQAILFCHKR-RVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGV 168 (313)
Q Consensus 92 ~e~~~~~l~~~~~~~--~~~~~l~~~~~~~~~~~i~~~l~~Lh~~-~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~ 168 (313)
||++.+++.++.... .....+++..+..++.|++.||+|||+. |++|+||+|+||+++.++. ++|+|||++.....
T Consensus 82 ~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~-~kl~dfg~~~~~~~ 160 (288)
T cd06616 82 MELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGN-IKLCDFGISGQLVD 160 (288)
T ss_pred EecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCc-EEEeecchhHHhcc
Confidence 999998776665432 1235689999999999999999999975 9999999999999998876 99999999865533
Q ss_pred CCcccccccccccccchhhhcCC--CCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 169 PVRIYTHEVVTLWYRAPEVLLGS--QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 169 ~~~~~~~~~~~~~~~~PE~~~~~--~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
.... ....++..|+|||.+.+. ..++.++|+||+|+++|++++|+.||..... ............. +....
T Consensus 161 ~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~-~~~~~--- 233 (288)
T cd06616 161 SIAK-TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGDP-PILSN--- 233 (288)
T ss_pred CCcc-ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCCC-CcCCC---
Confidence 2211 233567889999998765 3588999999999999999999999976542 2222222111000 00000
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
.....++.++.+||.+||+.||.+|||+.+++.||||.+.
T Consensus 234 -----------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~ 273 (288)
T cd06616 234 -----------------SEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY 273 (288)
T ss_pred -----------------cCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence 0002478999999999999999999999999999999873
No 222
>KOG4236|consensus
Probab=100.00 E-value=1.1e-43 Score=304.36 Aligned_cols=259 Identities=28% Similarity=0.420 Sum_probs=222.1
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEeccccCH
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSMDL 99 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~l 99 (313)
+.||+|.||+||.|.++.+|+.||+|++.+-.........+.+|+.+|+.++||.||.+--.|+..+.+++|||.+.|+.
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDM 649 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDM 649 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchH
Confidence 78999999999999999999999999998877555556889999999999999999999999999999999999999988
Q ss_pred HHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCC--eEEEecCCCccccCCCCccccccc
Q psy6391 100 KKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSN--IVKVADFGLARAFGVPVRIYTHEV 177 (313)
Q Consensus 100 ~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~--~~~l~df~~~~~~~~~~~~~~~~~ 177 (313)
...+.... .+++++...+-++.||+.||+|||-++|+|.||||+|||+..... .+||||||++...+.. +.....+
T Consensus 650 LEMILSsE-kgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk-sFRrsVV 727 (888)
T KOG4236|consen 650 LEMILSSE-KGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK-SFRRSVV 727 (888)
T ss_pred HHHHHHhh-cccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchh-hhhhhhc
Confidence 88876644 456999999999999999999999999999999999999976553 4999999999998743 4445678
Q ss_pred ccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCC
Q psy6391 178 VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW 257 (313)
Q Consensus 178 ~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (313)
||+.|+|||++...+ +...-|+||.|+++|--++|..||+... ++-+++-+....-++..|
T Consensus 728 GTPAYLaPEVLrnkG-yNrSLDMWSVGVIiYVsLSGTFPFNEdE--dIndQIQNAaFMyPp~PW---------------- 788 (888)
T KOG4236|consen 728 GTPAYLAPEVLRNKG-YNRSLDMWSVGVIIYVSLSGTFPFNEDE--DINDQIQNAAFMYPPNPW---------------- 788 (888)
T ss_pred CCccccCHHHHhhcc-ccccccceeeeEEEEEEecccccCCCcc--chhHHhhccccccCCCch----------------
Confidence 999999999998755 8999999999999999999999998543 344444443333333333
Q ss_pred chhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCCC
Q psy6391 258 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 308 (313)
Q Consensus 258 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~~ 308 (313)
.+++.++++||..+|+..-.+|-|++..|+|||+++-.-+-.
T Consensus 789 ---------~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq~w~D 830 (888)
T KOG4236|consen 789 ---------SEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQTWLD 830 (888)
T ss_pred ---------hhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcchHHHH
Confidence 458999999999999999999999999999999998644433
No 223
>KOG2345|consensus
Probab=100.00 E-value=7.1e-43 Score=273.31 Aligned_cols=264 Identities=23% Similarity=0.342 Sum_probs=208.8
Q ss_pred CchhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC
Q psy6391 6 TDDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN 85 (313)
Q Consensus 6 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 85 (313)
..+|.+.=++|++.+.||+|||+-||.+.+-.++..||+|.+..+.... .+...+|+...+.++|||+++++++...+
T Consensus 13 ~~tv~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~--~e~~~rEid~~rkf~s~~vl~l~dh~l~~ 90 (302)
T KOG2345|consen 13 RGTVIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQED--IEEALREIDNHRKFNSPNVLRLVDHQLRE 90 (302)
T ss_pred CCcEEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHH--HHHHHHHHHHHHhhCCcchHHHHHHHHHh
Confidence 5677788899999999999999999999999999999999998776222 47788999999999999999999987643
Q ss_pred -----cEEEEEEeccc-cCHHHHHhhCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCC--ceeccCCCCCEEEecCCCeEE
Q psy6391 86 -----YRLYLIFEFMS-MDLKKYIDTVPK-GQFLAADKVKSITYQIFQAILFCHKRR--VLHRDLKPQNLLIDAKSNIVK 156 (313)
Q Consensus 86 -----~~~~lv~e~~~-~~l~~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~Lh~~~--i~H~di~~~Nil~~~~~~~~~ 156 (313)
...|++++|.. |+|.+.++.... +..+++.++..++.+|+.||.+||+.. ++|+||||.||++...+. ++
T Consensus 91 ~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~-~v 169 (302)
T KOG2345|consen 91 EKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGL-PV 169 (302)
T ss_pred hccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCc-eE
Confidence 35899999987 789999887654 447999999999999999999999998 999999999999988766 99
Q ss_pred EecCCCccccCCCCcccc---------cccccccccchhhhcCC--CCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHH
Q psy6391 157 VADFGLARAFGVPVRIYT---------HEVVTLWYRAPEVLLGS--QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQ 225 (313)
Q Consensus 157 l~df~~~~~~~~~~~~~~---------~~~~~~~~~~PE~~~~~--~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~ 225 (313)
+.|||.++.......... ....|..|.|||.+.-. -..+.++|||||||++|.||.|..||+..-.
T Consensus 170 l~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~--- 246 (302)
T KOG2345|consen 170 LMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ--- 246 (302)
T ss_pred EEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh---
Confidence 999999977633222111 12347889999998432 2468999999999999999999999984211
Q ss_pred HHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 226 LFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
..+.......+.. ..+|. -..+|+.+.++|+.||+.||.+||++.+++++
T Consensus 247 ------~GgSlaLAv~n~q-------~s~P~---------~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 247 ------QGGSLALAVQNAQ-------ISIPN---------SSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred ------cCCeEEEeeeccc-------cccCC---------CCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 1111000000000 00110 02489999999999999999999999999874
No 224
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.5e-41 Score=286.36 Aligned_cols=248 Identities=28% Similarity=0.445 Sum_probs=204.5
Q ss_pred eccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc-CH
Q psy6391 22 IGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM-DL 99 (313)
Q Consensus 22 lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~-~l 99 (313)
||.|++|.||++.+..+++.+++|++...... ......+.+|+.+++.++|+||+++++.+.++...++++||+++ +|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 68999999999999988999999999765422 23346788999999999999999999999999999999999975 88
Q ss_pred HHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccccccccc
Q psy6391 100 KKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHEVVT 179 (313)
Q Consensus 100 ~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 179 (313)
.+.+... ..+++..+..++.||+.+|++||++|++|+||+|+||+++.++. ++|+|||.+....... ......++
T Consensus 81 ~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~-~~l~df~~~~~~~~~~-~~~~~~~~ 155 (262)
T cd05572 81 WTILRDR---GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGY-VKLVDFGFAKKLKSGQ-KTWTFCGT 155 (262)
T ss_pred HHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCC-EEEeeCCcccccCccc-ccccccCC
Confidence 7777652 34899999999999999999999999999999999999998877 9999999997765432 22334678
Q ss_pred ccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCC
Q psy6391 180 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS--EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW 257 (313)
Q Consensus 180 ~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (313)
..|++||.+... .++.++|+||+|+++|++++|..||.... .......+......+. ++
T Consensus 156 ~~~~~PE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------------~~-- 216 (262)
T cd05572 156 PEYVAPEIILNK-GYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLE----------------FP-- 216 (262)
T ss_pred cCccChhHhcCC-CCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCC----------------CC--
Confidence 889999988654 47899999999999999999999998776 4344433332111110 00
Q ss_pred chhhhhhhccCCCHHHHHHHHHHhccCCCCCCC-----HHHHhcCCCCCC
Q psy6391 258 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN-----AENALKHKYFAD 302 (313)
Q Consensus 258 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~e~l~h~~~~~ 302 (313)
...++++.++|.+||+.||++||+ +.|+++||||++
T Consensus 217 ---------~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 257 (262)
T cd05572 217 ---------NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNG 257 (262)
T ss_pred ---------cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhC
Confidence 134789999999999999999999 999999999996
No 225
>KOG0983|consensus
Probab=100.00 E-value=7e-43 Score=277.20 Aligned_cols=267 Identities=24% Similarity=0.424 Sum_probs=221.0
Q ss_pred CchhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEe
Q psy6391 6 TDDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIE 84 (313)
Q Consensus 6 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~ 84 (313)
+.+-...+++.+.++.||.|..|+||+++.+.+|...|+|.+......++ ..+++..+.+.... ++|+||+.+|+|..
T Consensus 84 g~r~~~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee-~kRILmDldvv~~s~dcpyIV~c~GyFi~ 162 (391)
T KOG0983|consen 84 GQRYQADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEE-NKRILMDLDVVLKSHDCPYIVQCFGYFIT 162 (391)
T ss_pred CcccccChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHH-HHHHHHhhhHHhhccCCCeeeeeeeEEee
Confidence 45556778889999999999999999999999999999999987665544 35666677665554 59999999999999
Q ss_pred CcEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCCEEEecCCCeEEEecCCCc
Q psy6391 85 NYRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHK-RRVLHRDLKPQNLLIDAKSNIVKVADFGLA 163 (313)
Q Consensus 85 ~~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~-~~i~H~di~~~Nil~~~~~~~~~l~df~~~ 163 (313)
+...++.||.|+.-...++.... +++++..+..+...++.||.||.. +|++|+|+||+|||+|..|+ +|+||||.+
T Consensus 163 n~dV~IcMelMs~C~ekLlkrik--~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~Gn-iKlCDFGIs 239 (391)
T KOG0983|consen 163 NTDVFICMELMSTCAEKLLKRIK--GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGN-IKLCDFGIS 239 (391)
T ss_pred CchHHHHHHHHHHHHHHHHHHhc--CCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCC-EEeeccccc
Confidence 99999999999876667776643 459999999999999999999996 58999999999999999999 999999999
Q ss_pred cccCCCCcccccccccccccchhhhcCC--CCCCcchhHhHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHhcCCCCCCC
Q psy6391 164 RAFGVPVRIYTHEVVTLWYRAPEVLLGS--QRYSCPVDVWSIGCIFAEIATRKPLFQGD-SEIDQLFRIFRVLTTPTEDN 240 (313)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~--~~~~~~~Di~slG~~l~~ll~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~ 240 (313)
...-+.. ..+...|-+.||+||.+... ..++.++|+||||+++++|.||+.||... .+.+....+.+ ..+|..+.
T Consensus 240 GrlvdSk-AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln-~ePP~L~~ 317 (391)
T KOG0983|consen 240 GRLVDSK-AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN-EEPPLLPG 317 (391)
T ss_pred ceeeccc-ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh-cCCCCCCc
Confidence 7764432 22455788899999998643 46899999999999999999999999975 45566666665 22222111
Q ss_pred CCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 241 WPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
- .++|+.+.+|+..||..|+.+||...++|+|||+..-
T Consensus 318 ~-------------------------~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 318 H-------------------------MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRY 355 (391)
T ss_pred c-------------------------cCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeec
Confidence 0 2488999999999999999999999999999999864
No 226
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.9e-41 Score=288.12 Aligned_cols=258 Identities=28% Similarity=0.441 Sum_probs=210.9
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEec
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
-|++.+.||.|++|.||++.+..++..+++|.+...... .....+.+|+.+++.++|+|++++++.+..+...++|+||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccch-HHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 477889999999999999999888999999988654322 2235788899999999999999999999999999999999
Q ss_pred ccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccc
Q psy6391 95 MSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIY 173 (313)
Q Consensus 95 ~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~ 173 (313)
+++ +|...+.. ..+++..+..++.|++.++.+||+.|++|+||+|+||+++.++. ++|+|||++..........
T Consensus 84 ~~~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~-~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06641 84 LGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGE-VKLADFGVAGQLTDTQIKR 158 (277)
T ss_pred CCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCC-EEEeecccceecccchhhh
Confidence 986 67666643 34889999999999999999999999999999999999998876 9999999886654332222
Q ss_pred ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcccc
Q psy6391 174 THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT 253 (313)
Q Consensus 174 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (313)
....++..|+|||.+.+. ..+.++|+||+|+++|++++|..||...........+.... .+. .
T Consensus 159 ~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~---~------------ 221 (277)
T cd06641 159 NTFVGTPFWMAPEVIKQS-AYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNN-PPT---L------------ 221 (277)
T ss_pred ccccCCccccChhhhccC-CCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCC-CCC---C------------
Confidence 334567889999988654 47889999999999999999999998766555444432211 000 0
Q ss_pred CCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCC
Q psy6391 254 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP 307 (313)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~ 307 (313)
...++.++.+++.+||+.+|.+||++.+++.||||.+....+
T Consensus 222 ------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~~~~ 263 (277)
T cd06641 222 ------------EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFAKKT 263 (277)
T ss_pred ------------CcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhhhcc
Confidence 024678999999999999999999999999999999865443
No 227
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=3.8e-41 Score=290.22 Aligned_cols=258 Identities=28% Similarity=0.405 Sum_probs=209.8
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
++|++.+.||.|++|.||++.+..+++.|++|.+...... ......+.+|+.+++.++||||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 4799999999999999999999999999999998765321 222356778999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
||++| +|.+++.. ...+++..+..++.|++.|+.|||+.|++|+||+|+||+++..+. ++|+|||.+........
T Consensus 81 e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~-~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 81 EYVEGGDCATLLKN---IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGH-IKLTDFGLSKIGLMSLT 156 (305)
T ss_pred ecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCC-EEEeeCCCccccCcCcc
Confidence 99986 78777765 245899999999999999999999999999999999999998876 99999998763211100
Q ss_pred ---------------ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCC
Q psy6391 172 ---------------IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTP 236 (313)
Q Consensus 172 ---------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~ 236 (313)
......++..|+|||.+... ..+.++|+||||+++|++++|..||......+............
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 235 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQ-GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEW 235 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCC
Confidence 00113457789999988654 47999999999999999999999998777666555554321111
Q ss_pred CCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC---HHHHhcCCCCCC
Q psy6391 237 TEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN---AENALKHKYFAD 302 (313)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps---~~e~l~h~~~~~ 302 (313)
+.. ...++.++.++|.+||+.||++||+ +.++++||||..
T Consensus 236 ~~~--------------------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~ 278 (305)
T cd05609 236 PEG--------------------------DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLG 278 (305)
T ss_pred CCc--------------------------cccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccC
Confidence 100 0147899999999999999999997 899999999966
No 228
>KOG0607|consensus
Probab=100.00 E-value=5.7e-43 Score=283.22 Aligned_cols=254 Identities=26% Similarity=0.395 Sum_probs=208.1
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcEEEEEEecccc-
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIENYRLYLIFEFMSM- 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~- 97 (313)
+.||+|+++.|--+....++..||+|++.++.... ..++.+|++++.+. .|+||+.++++|+++...|+|||.+.|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHs--R~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GG 161 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHS--RSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGG 161 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchH--HHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCc
Confidence 56999999999999999999999999998875444 47889999999998 699999999999999999999999986
Q ss_pred CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCe--EEEecCCCccccCCC------
Q psy6391 98 DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNI--VKVADFGLARAFGVP------ 169 (313)
Q Consensus 98 ~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~--~~l~df~~~~~~~~~------ 169 (313)
.|+..++. .+.+++.++.++..+|+.||.+||.+||+|+|+||+|||....+.. +||+||++......+
T Consensus 162 plLshI~~---~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spa 238 (463)
T KOG0607|consen 162 PLLSHIQK---RKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPA 238 (463)
T ss_pred hHHHHHHH---hhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCC
Confidence 66555554 5569999999999999999999999999999999999998655432 899999887654322
Q ss_pred -Ccccccccccccccchhhhc----CCCCCCcchhHhHHHHHHHHHHhCCCCCCCCCh---------------HHHHHHH
Q psy6391 170 -VRIYTHEVVTLWYRAPEVLL----GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE---------------IDQLFRI 229 (313)
Q Consensus 170 -~~~~~~~~~~~~~~~PE~~~----~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~---------------~~~~~~~ 229 (313)
......++|+..|||||+.. ....++.+.|.||||+++|-|++|++||.+.-. ...++.+
T Consensus 239 stP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesI 318 (463)
T KOG0607|consen 239 STPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESI 318 (463)
T ss_pred CCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHH
Confidence 22334568899999999963 234689999999999999999999999975321 1223333
Q ss_pred HHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 230 FRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
-.+-.+.++.. +..+|.+..++|..+|..|+.+|.++.++++|||++.-
T Consensus 319 QEGkYeFPdkd-------------------------WahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~ 367 (463)
T KOG0607|consen 319 QEGKYEFPDKD-------------------------WAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRC 367 (463)
T ss_pred hccCCcCChhh-------------------------hHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcccccc
Confidence 33333333332 34589999999999999999999999999999999874
No 229
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=4.6e-41 Score=284.18 Aligned_cols=259 Identities=26% Similarity=0.406 Sum_probs=205.4
Q ss_pred CCCCchhhhhhccceeeeee--ccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeec
Q psy6391 3 DKATDDVKSRLEDYEKVEKI--GEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLH 79 (313)
Q Consensus 3 ~~~~~~~~~~~~~y~~~~~l--g~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~ 79 (313)
+....+.....++|++.+.+ |.|++|.||++.++.++..+++|.+....... .|+.....+ +|+|+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~ 75 (267)
T PHA03390 3 DKSLSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLY 75 (267)
T ss_pred chHHHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEE
Confidence 44556677778899998887 99999999999999999999999987543221 122222223 799999999
Q ss_pred eeEEeCcEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEe
Q psy6391 80 DTMIENYRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVA 158 (313)
Q Consensus 80 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~ 158 (313)
+.+..++.+++||||+++ +|.+++... ..+++..++.++.||+.|+.+||+.|++|+||+|+||+++.++..++|+
T Consensus 76 ~~~~~~~~~~iv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~ 152 (267)
T PHA03390 76 YSVTTLKGHVLIMDYIKDGDLFDLLKKE---GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLC 152 (267)
T ss_pred EEEecCCeeEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEe
Confidence 999999999999999975 888887653 3689999999999999999999999999999999999999988459999
Q ss_pred cCCCccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHhcCCCC
Q psy6391 159 DFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQ-LFRIFRVLTTPT 237 (313)
Q Consensus 159 df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-~~~~~~~~~~~~ 237 (313)
|||.+...+.. ....++..|+|||.+.+.. ++.++|+||+|+++|+|++|..||........ .......... .
T Consensus 153 dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~ 226 (267)
T PHA03390 153 DYGLCKIIGTP----SCYDGTLDYFSPEKIKGHN-YDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQK-K 226 (267)
T ss_pred cCccceecCCC----ccCCCCCcccChhhhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcc-c
Confidence 99998765433 2235688899999987644 78899999999999999999999986544322 1222111110 0
Q ss_pred CCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC-HHHHhcCCCCCC
Q psy6391 238 EDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN-AENALKHKYFAD 302 (313)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-~~e~l~h~~~~~ 302 (313)
.. ..+.+++.+.+||.+||+.||.+||+ ++++|+||||+.
T Consensus 227 ~~-------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 227 LP-------------------------FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred CC-------------------------cccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 00 01247899999999999999999996 699999999974
No 230
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=8.5e-41 Score=282.30 Aligned_cols=255 Identities=26% Similarity=0.458 Sum_probs=203.9
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCC---CchhHHHHHHHHhhcCCCCceeeceeEEeC--cEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEG---IPATAIREISVLKELNHPNIVQLHDTMIEN--YRL 88 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~ 88 (313)
.+|++.+.||+|++|.||.+.+..+++.|++|.+........ ....+.+|+.+++.++|++|+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 579999999999999999999998999999998865432221 124677899999999999999999998764 578
Q ss_pred EEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 89 YLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 89 ~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
++++||+++ +|.+.+... ..+++..+..++.|++.+|.+||++|++|+||+|+||+++.++. ++|+|||.+....
T Consensus 82 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~-~~l~Dfg~~~~~~ 157 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY---GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGN-VKLGDFGASKRLQ 157 (265)
T ss_pred EEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCC-EEECcCccccccc
Confidence 899999975 788777643 34788999999999999999999999999999999999998876 9999999887543
Q ss_pred CC---CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCC
Q psy6391 168 VP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 244 (313)
Q Consensus 168 ~~---~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
.. ........++..|+|||.+.+. ..+.++|+||||+++|++++|+.||.............. .+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~~~~~--- 230 (265)
T cd06652 158 TICLSGTGMKSVTGTPYWMSPEVISGE-GYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT---QPTNPVL--- 230 (265)
T ss_pred cccccccccccCCCCccccChhhhcCC-CCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc---CCCCCCC---
Confidence 21 1112234578889999998764 478999999999999999999999987655544433322 1111100
Q ss_pred CCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCC
Q psy6391 245 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA 301 (313)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~ 301 (313)
+ ..++..+.++|.+|+. +|.+||+++++++|||+.
T Consensus 231 ----------~-----------~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 231 ----------P-----------PHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred ----------c-----------hhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 0 2467889999999995 899999999999999984
No 231
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=7.3e-41 Score=289.35 Aligned_cols=253 Identities=26% Similarity=0.450 Sum_probs=209.1
Q ss_pred ceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEec
Q psy6391 16 YEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 16 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
|...+.||+|++|.||+|.+..++..+++|.+...... ......+.+|+.+++.++|+|++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 66678899999999999999889999999998755432 22235678899999999999999999999999999999999
Q ss_pred cccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccc
Q psy6391 95 MSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYT 174 (313)
Q Consensus 95 ~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~ 174 (313)
+.+++.+.+... ..++++..+..++.||+.++.|||+.|++|+||+|+||+++.++. ++|+|||.+...... .
T Consensus 103 ~~~~l~~~l~~~--~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~-~kL~dfg~~~~~~~~----~ 175 (313)
T cd06633 103 CLGSASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQ-VKLADFGSASKSSPA----N 175 (313)
T ss_pred CCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCC-EEEeecCCCcccCCC----C
Confidence 999888877652 345899999999999999999999999999999999999998876 999999988654322 2
Q ss_pred cccccccccchhhhcC--CCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 175 HEVVTLWYRAPEVLLG--SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 175 ~~~~~~~~~~PE~~~~--~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
...++..|+|||.+.. ....+.++|+||+|+++|+|++|..||...+.............+.. .
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~------------- 241 (313)
T cd06633 176 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTL-Q------------- 241 (313)
T ss_pred CccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC-C-------------
Confidence 3467888999999742 24578899999999999999999999987766555554433111100 0
Q ss_pred cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 253 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
...++..+.+|+.+||+.+|.+||++.+++.||||..
T Consensus 242 -------------~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~ 278 (313)
T cd06633 242 -------------SNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRR 278 (313)
T ss_pred -------------ccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence 0236788999999999999999999999999999987
No 232
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=4.8e-42 Score=291.82 Aligned_cols=255 Identities=28% Similarity=0.433 Sum_probs=207.8
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
+.|++.+.||.|++|.||+|.+..++..|++|.+....... ....+.+|+.+++.++|+||+++++.+..+...++|+|
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAED-EIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIME 82 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchH-HHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEE
Confidence 45778889999999999999998889999999987543222 23578899999999999999999999999999999999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
|+++ +|.+.+.. ..+++..++.++.||+.++.|||++|++|+||+|+||+++.++. ++++|||++.........
T Consensus 83 ~~~~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~-~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06642 83 YLGGGSALDLLKP----GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGD-VKLADFGVAGQLTDTQIK 157 (277)
T ss_pred ccCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCC-EEEccccccccccCcchh
Confidence 9986 66666542 35889999999999999999999999999999999999998876 999999998765433222
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
.....++..|+|||.+.+. .++.++|+||+|+++|++++|..||...........+.... . +..
T Consensus 158 ~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~-~---~~~----------- 221 (277)
T cd06642 158 RNTFVGTPFWMAPEVIKQS-AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNS-P---PTL----------- 221 (277)
T ss_pred hhcccCcccccCHHHhCcC-CCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCC-C---CCC-----------
Confidence 2334568889999998764 47899999999999999999999998665544333221110 0 000
Q ss_pred cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 253 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
...++.++.++|.+||+.+|++||++.+++.||||..-
T Consensus 222 -------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06642 222 -------------EGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRY 259 (277)
T ss_pred -------------CcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHH
Confidence 01367899999999999999999999999999999763
No 233
>KOG4279|consensus
Probab=100.00 E-value=1.5e-42 Score=305.67 Aligned_cols=256 Identities=25% Similarity=0.396 Sum_probs=213.6
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc-C
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM-D 98 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~-~ 98 (313)
-.||+|.+|+||.|++..+...+|||-+...... ..+-+.+|+...++++|.|||+++|.+..++++-|.||.++| +
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr--~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSR--EVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccch--hhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 3599999999999999999999999988654332 346788999999999999999999999999999999999986 7
Q ss_pred HHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccccc
Q psy6391 99 LKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHEVV 178 (313)
Q Consensus 99 l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~ 178 (313)
|-++++..+..-.-.+..+.-..+||++||.|||++.|||+|||-+|||++.-.+.+||+|||.++....-....-...|
T Consensus 659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTG 738 (1226)
T KOG4279|consen 659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTG 738 (1226)
T ss_pred HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCcccccccc
Confidence 87888874433223888899999999999999999999999999999999998888999999999887655555566789
Q ss_pred cccccchhhhcCC-CCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCC
Q psy6391 179 TLWYRAPEVLLGS-QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW 257 (313)
Q Consensus 179 ~~~~~~PE~~~~~-~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (313)
|..|||||++..+ ..++.++|||||||++.+|.||++||-........ +++.......+..+
T Consensus 739 TLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA--MFkVGmyKvHP~iP--------------- 801 (1226)
T KOG4279|consen 739 TLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA--MFKVGMYKVHPPIP--------------- 801 (1226)
T ss_pred chhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh--hhhhcceecCCCCc---------------
Confidence 9999999999644 36899999999999999999999999865443322 22222211111111
Q ss_pred chhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 258 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 258 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
..++.+++.||.+|+.+||..||++.++|..||++..
T Consensus 802 ---------eelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 802 ---------EELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred ---------HHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 2578999999999999999999999999999999986
No 234
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.9e-41 Score=286.14 Aligned_cols=264 Identities=26% Similarity=0.455 Sum_probs=206.4
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC--cEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN--YRLYLI 91 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~lv 91 (313)
++|...+.||.|++|.||.+.+..+++.+++|.+...... .....+.+|+++++.++||||+++++++.+. +..++|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP-DLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCch-HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 4789999999999999999999888999999998754332 3346788999999999999999999998653 478999
Q ss_pred Eecccc-CHHHHHhhC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 92 FEFMSM-DLKKYIDTV-PKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 92 ~e~~~~-~l~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
|||+++ +|.+++... .....+++..+..++.||+.+|.|||+.|++|+||+|+||+++.++. ++|+|||++......
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~-~~l~dfg~~~~~~~~ 158 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQ-VKLCDFGVSGELVNS 158 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCe-EEEeecccccccccc
Confidence 999975 887766542 23455889999999999999999999999999999999999998876 999999998655332
Q ss_pred CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHhcCCCCCCCCCCC
Q psy6391 170 VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE-----IDQLFRIFRVLTTPTEDNWPGV 244 (313)
Q Consensus 170 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
.. ....++..|+|||.+.+. .++.++|+||||+++|+|++|..||..... .+....+... ..+.......
T Consensus 159 ~~--~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~- 233 (287)
T cd06621 159 LA--GTFTGTSFYMAPERIQGK-PYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM-PNPELKDEPG- 233 (287)
T ss_pred cc--ccccCCccccCHHHhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC-CchhhccCCC-
Confidence 21 233567889999988654 478999999999999999999999986522 2222221110 0000000000
Q ss_pred CCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCC
Q psy6391 245 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 304 (313)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~ 304 (313)
.-...++++.+||.+||..||.+|||+.|++.||||+...
T Consensus 234 --------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~ 273 (287)
T cd06621 234 --------------------NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQM 273 (287)
T ss_pred --------------------CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccc
Confidence 0012457899999999999999999999999999997753
No 235
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=8.8e-41 Score=280.69 Aligned_cols=255 Identities=30% Similarity=0.528 Sum_probs=210.7
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC--cEEEEEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN--YRLYLIF 92 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~lv~ 92 (313)
+|.+.+.||+|++|.||+|.+..+++.+++|++............+.+|+.++++++|++++++++.+.+. ...++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 58899999999999999999998899999999977654444457888999999999999999999999988 8999999
Q ss_pred eccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 93 EFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 93 e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
|+++ ++|.+.+.... .+++..++.++.|++.++.+||+.|++|+||+|+||+++.++. ++|+|||.+........
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~-~~l~d~~~~~~~~~~~~ 156 (260)
T cd06606 81 EYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGV-VKLADFGCAKRLGDIET 156 (260)
T ss_pred EecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCC-EEEcccccEEecccccc
Confidence 9995 58888877533 5899999999999999999999999999999999999998876 99999999987755432
Q ss_pred --ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy6391 172 --IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 249 (313)
Q Consensus 172 --~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (313)
......++..|+|||.+.... .+.++|+||||++++++++|..||........ .............
T Consensus 157 ~~~~~~~~~~~~y~~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~--------- 224 (260)
T cd06606 157 GEGTGSVRGTPYWMAPEVIRGEE-YGRAADIWSLGCTVIEMATGKPPWSELGNPMA--ALYKIGSSGEPPE--------- 224 (260)
T ss_pred cccccCCCCCccccCHhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCchHH--HHHhccccCCCcC---------
Confidence 123456788999999886644 89999999999999999999999987762221 1111110000000
Q ss_pred ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 250 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
.+ ..++..+.+||.+|++.||++||++.+++.||||
T Consensus 225 ----~~-----------~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 225 ----IP-----------EHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred ----CC-----------cccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 00 2357999999999999999999999999999997
No 236
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.6e-41 Score=288.09 Aligned_cols=255 Identities=24% Similarity=0.383 Sum_probs=206.1
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCC-----cEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTG-----ALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENY 86 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~-----~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 86 (313)
.+++|++.+.||+|++|.||+|.....+ ..+++|.+..... ......+.+|+.++..++||||+++++++.+.+
T Consensus 3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~ 81 (283)
T cd05048 3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE-PKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ 81 (283)
T ss_pred ChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC-HHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC
Confidence 4679999999999999999999876544 6799998864432 222356889999999999999999999999999
Q ss_pred EEEEEEecccc-CHHHHHhhCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCC
Q psy6391 87 RLYLIFEFMSM-DLKKYIDTVPK-------------GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKS 152 (313)
Q Consensus 87 ~~~lv~e~~~~-~l~~~~~~~~~-------------~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~ 152 (313)
..+++|||+.+ +|.+.+..... ...+++..+..++.|++.||.|||+.|++|+||||+||+++.++
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGL 161 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCC
Confidence 99999999975 88888765321 14588999999999999999999999999999999999999887
Q ss_pred CeEEEecCCCccccCCCC--cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy6391 153 NIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRI 229 (313)
Q Consensus 153 ~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~ 229 (313)
. ++|+|||++....... .......++..|+|||.+.+. .++.++|+||||+++|+|++ |..||......+....+
T Consensus 162 ~-~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05048 162 T-VKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYG-KFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMI 239 (283)
T ss_pred c-EEECCCcceeeccccccccccCCCcccccccCHHHhccC-cCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 6 9999999987643221 122334557789999988654 48899999999999999998 99999887776665554
Q ss_pred HHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 230 FRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
......+.+ ..+|+++.+++.+||+.||.+||++.+++++
T Consensus 240 ~~~~~~~~~----------------------------~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 240 RSRQLLPCP----------------------------EDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HcCCcCCCc----------------------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 432111110 2478999999999999999999999999864
No 237
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=3.8e-41 Score=297.76 Aligned_cols=263 Identities=21% Similarity=0.315 Sum_probs=204.4
Q ss_pred CCchhhhhhccceeeeeeccccceEEEEEEe-----CcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceee
Q psy6391 5 ATDDVKSRLEDYEKVEKIGEGTYGVVYKAKN-----KVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQL 78 (313)
Q Consensus 5 ~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~-----~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~ 78 (313)
...++....++|++.+.||+|+||.||++++ ..++..||+|+++..... ...+.+.+|+.+++.+ +||||+++
T Consensus 26 ~~~~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~~Ei~il~~l~~HpnIv~l 104 (375)
T cd05104 26 YDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHINIVNL 104 (375)
T ss_pred CccccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCc-HHHHHHHHHHHHHHHhcCCcceeee
Confidence 3445666677999999999999999999974 345668999998654322 2235788999999999 89999999
Q ss_pred ceeEEeCcEEEEEEecccc-CHHHHHhhCC--------------------------------------------------
Q psy6391 79 HDTMIENYRLYLIFEFMSM-DLKKYIDTVP-------------------------------------------------- 107 (313)
Q Consensus 79 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~-------------------------------------------------- 107 (313)
++++.+.+..++||||+++ +|.+.+....
T Consensus 105 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 184 (375)
T cd05104 105 LGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKAD 184 (375)
T ss_pred eeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccc
Confidence 9999999999999999985 8877775421
Q ss_pred ----------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 108 ----------------------KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 108 ----------------------~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
....+++..+..++.||+.||.|||+.|++|+||||+|||++.++. ++|+|||++..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~-~kl~DfG~a~~ 263 (375)
T cd05104 185 KRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRI-TKICDFGLARD 263 (375)
T ss_pred cccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCc-EEEecCcccee
Confidence 1124788889999999999999999999999999999999998765 99999999876
Q ss_pred cCCCCcc--cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCC
Q psy6391 166 FGVPVRI--YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 242 (313)
Q Consensus 166 ~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
....... .....++..|+|||.+.+. .++.++||||||+++|+|++ |..||..........+.......+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~---- 338 (375)
T cd05104 264 IRNDSNYVVKGNARLPVKWMAPESIFNC-VYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLS---- 338 (375)
T ss_pred ccCcccccccCCCCCCcceeChhHhcCC-CCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCC----
Confidence 5432211 1112335679999998764 48999999999999999998 89999876544443333332111100
Q ss_pred CCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 243 GVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
+ ...+.++.++|.+||+.||++||++.++++.
T Consensus 339 ------------~-----------~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 339 ------------P-----------ECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred ------------C-----------CCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 0 1256899999999999999999999999863
No 238
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=6.5e-41 Score=288.63 Aligned_cols=259 Identities=20% Similarity=0.299 Sum_probs=199.0
Q ss_pred hccceeeeeeccccceEEEEEEeCc----------------CCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCce
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKV----------------TGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIV 76 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~----------------~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~ 76 (313)
-++|++.+.||+|+||.||++.+.. ++..||+|++..... ......+.+|+.++..++||||+
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN-KNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCee
Confidence 3689999999999999999997532 344799999875432 22235688999999999999999
Q ss_pred eeceeEEeCcEEEEEEecccc-CHHHHHhhCC----------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceec
Q psy6391 77 QLHDTMIENYRLYLIFEFMSM-DLKKYIDTVP----------------KGQFLAADKVKSITYQIFQAILFCHKRRVLHR 139 (313)
Q Consensus 77 ~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~----------------~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~ 139 (313)
++++++.+.+..++||||+.+ +|.+++.... ....+++..+..++.||+.||.|||+.|++|+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~ 162 (304)
T cd05096 83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHR 162 (304)
T ss_pred EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 999999999999999999975 8888775422 11246788899999999999999999999999
Q ss_pred cCCCCCEEEecCCCeEEEecCCCccccCCCCc--ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh--CCC
Q psy6391 140 DLKPQNLLIDAKSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT--RKP 215 (313)
Q Consensus 140 di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~--g~~ 215 (313)
||||+||+++.++. ++|+|||++........ ......++..|+|||++... .++.++|+||||+++|+|++ +..
T Consensus 163 dlkp~Nill~~~~~-~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~~~~~~ 240 (304)
T cd05096 163 DLATRNCLVGENLT-IKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMG-KFTTASDVWAFGVTLWEILMLCKEQ 240 (304)
T ss_pred CcchhheEEcCCcc-EEECCCccceecccCceeEecCcCCCCccccCHHHHhcC-CCCchhhhHHHHHHHHHHHHccCCC
Confidence 99999999998876 99999999876533221 11223446789999998654 48999999999999999986 567
Q ss_pred CCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHh
Q psy6391 216 LFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENAL 295 (313)
Q Consensus 216 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l 295 (313)
||......................... ...+.++..+.+++.+||+.||.+|||+.++.
T Consensus 241 p~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~ 299 (304)
T cd05096 241 PYGELTDEQVIENAGEFFRDQGRQVYL---------------------FRPPPCPQGLYELMLQCWSRDCRERPSFSDIH 299 (304)
T ss_pred CCCcCCHHHHHHHHHHHhhhccccccc---------------------cCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence 888766655544433321111000000 00124778999999999999999999999994
No 239
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=3.9e-41 Score=286.22 Aligned_cols=252 Identities=28% Similarity=0.386 Sum_probs=201.9
Q ss_pred eccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc-CH
Q psy6391 22 IGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM-DL 99 (313)
Q Consensus 22 lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~-~l 99 (313)
||+|++|.||++.+..+++.|++|.+...... ......+.+|+.+++.++||+++++++++...+..++|+||+++ +|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999999989999999998754322 22234567899999999999999999999999999999999985 88
Q ss_pred HHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccccccccc
Q psy6391 100 KKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHEVVT 179 (313)
Q Consensus 100 ~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 179 (313)
.+.+.... ...+++..+..++.|++.++.|||+.|++|+||+|+||+++.++. ++|+|||.+...... .......++
T Consensus 81 ~~~l~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~-~~l~dfg~~~~~~~~-~~~~~~~~~ 157 (277)
T cd05577 81 KYHIYNVG-EPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGN-VRISDLGLAVELKGG-KKIKGRAGT 157 (277)
T ss_pred HHHHHHcC-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCC-EEEccCcchhhhccC-CccccccCC
Confidence 77776533 235899999999999999999999999999999999999998877 999999988765432 222334567
Q ss_pred ccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCch
Q psy6391 180 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN 259 (313)
Q Consensus 180 ~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (313)
..|+|||.+.+.. ++.++|+||+|+++|+|++|+.||...........+........ . ..
T Consensus 158 ~~y~~PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~-------------~~----- 217 (277)
T cd05577 158 PGYMAPEVLQGEV-YDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMA-V-------------EY----- 217 (277)
T ss_pred CCcCCHHHhcCCC-CCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccccc-c-------------cC-----
Confidence 8899999987654 88999999999999999999999987654222222221110000 0 00
Q ss_pred hhhhhhccCCCHHHHHHHHHHhccCCCCCC-----CHHHHhcCCCCCC
Q psy6391 260 FCLDKHVKNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFAD 302 (313)
Q Consensus 260 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~e~l~h~~~~~ 302 (313)
...+++.+.++|.+||+.||.+|| ++.++++||||++
T Consensus 218 ------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~ 259 (277)
T cd05577 218 ------PDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKD 259 (277)
T ss_pred ------CccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhc
Confidence 024689999999999999999999 8999999999976
No 240
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=4.8e-41 Score=284.00 Aligned_cols=252 Identities=17% Similarity=0.227 Sum_probs=201.9
Q ss_pred hhccceeeeeeccccceEEEEEEeC---cCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNK---VTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRL 88 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~---~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 88 (313)
..++|++.+.||+|+||.||+|.++ ..+..+++|.++..... .....+.+|+.+++.++||||+++++++..++..
T Consensus 3 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 3 DNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSD-KQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM 81 (266)
T ss_pred chHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCH-HHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence 4568999999999999999999764 34668999998764322 2235688999999999999999999999999999
Q ss_pred EEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 89 YLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 89 ~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
++||||+++ +|.+++... ...+++..++.++.||+.||+|||+.|++|+||+|+||+++.++. ++++|||.+....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~-~~l~dfg~~~~~~ 158 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKH--EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLV-CKISGFRRLQEDK 158 (266)
T ss_pred EEEEEeCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCc-EEECCCccccccc
Confidence 999999986 676676642 345899999999999999999999999999999999999998876 9999999876543
Q ss_pred CCCc-ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCC
Q psy6391 168 VPVR-IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 245 (313)
Q Consensus 168 ~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
.... ......++..|+|||.+... .++.++||||+|+++|++++ |..||...........+......+.+
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~------- 230 (266)
T cd05064 159 SEAIYTTMSGKSPVLWAAPEAIQYH-HFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAP------- 230 (266)
T ss_pred ccchhcccCCCCceeecCHHHHhhC-CccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCC-------
Confidence 2211 11112335679999988654 48999999999999999875 99999988776665555332111111
Q ss_pred CCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 246 KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
..++..+.+++.+||+.+|.+||++.++++
T Consensus 231 ---------------------~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 231 ---------------------RNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred ---------------------CCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 246789999999999999999999999875
No 241
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=3.5e-41 Score=286.68 Aligned_cols=253 Identities=31% Similarity=0.500 Sum_probs=211.4
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcC-CCCceeeceeEEeCcEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELN-HPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv 91 (313)
++|.+.+.||.|++|.||++....+++.+++|++..... .......+.+|+.+++++. |+||+++++.+.+++..+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 479999999999999999999998999999999876432 2222366788999999998 99999999999999999999
Q ss_pred Eeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCC
Q psy6391 92 FEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV 170 (313)
Q Consensus 92 ~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~ 170 (313)
||++. ++|.+.+... ..+++..++.++.|++.+|.+||+.|++|+||+|+||+++.++. ++++|||.+.......
T Consensus 81 ~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~-~~l~df~~~~~~~~~~ 156 (280)
T cd05581 81 LEYAPNGELLQYIRKY---GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMH-IKITDFGTAKVLDPNS 156 (280)
T ss_pred EcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCC-EEecCCccccccCCcc
Confidence 99995 5888888753 35999999999999999999999999999999999999998877 9999999987654322
Q ss_pred --------------------cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy6391 171 --------------------RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIF 230 (313)
Q Consensus 171 --------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~ 230 (313)
.......++..|+|||.+... ..+.++|+||||++++++++|..||.............
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~ 235 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEK-PAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL 235 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhCCC-CCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH
Confidence 111223467889999988654 48899999999999999999999999887655555544
Q ss_pred HhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCH----HHHhcCCCC
Q psy6391 231 RVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINA----ENALKHKYF 300 (313)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~----~e~l~h~~~ 300 (313)
......+ ..+++.+.+||.+||+.+|.+||++ .++++||||
T Consensus 236 ~~~~~~~-----------------------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 236 KLEYSFP-----------------------------PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred hcCCCCC-----------------------------CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 2111100 2467899999999999999999999 999999998
No 242
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=5.5e-41 Score=287.29 Aligned_cols=257 Identities=25% Similarity=0.459 Sum_probs=208.3
Q ss_pred eeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc-
Q psy6391 19 VEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM- 97 (313)
Q Consensus 19 ~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~- 97 (313)
...||+|++|.||++....+++.+++|.+..... .....+.+|+.+++.++|+|++++++.+..++..+++|||+++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 102 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 102 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccch--hHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence 4679999999999999998999999998754322 2245688899999999999999999999999999999999986
Q ss_pred CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccccccc
Q psy6391 98 DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHEV 177 (313)
Q Consensus 98 ~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~~ 177 (313)
+|.+++.. ..+++..++.++.|++.++++||+.|++|+||+|+||+++.++. ++|+|||.+..............
T Consensus 103 ~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~-~~l~dfg~~~~~~~~~~~~~~~~ 177 (292)
T cd06657 103 ALTDIVTH----TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKSLV 177 (292)
T ss_pred cHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC-EEEcccccceecccccccccccc
Confidence 66665532 24789999999999999999999999999999999999998876 99999998865543322223346
Q ss_pred ccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCC
Q psy6391 178 VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW 257 (313)
Q Consensus 178 ~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (313)
++..|+|||.+... ..+.++|+||+|+++|++++|..||................ +.. +.
T Consensus 178 ~~~~y~~pE~~~~~-~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~-~~~---~~--------------- 237 (292)
T cd06657 178 GTPYWMAPELISRL-PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-PPK---LK--------------- 237 (292)
T ss_pred cCccccCHHHhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhC-Ccc---cC---------------
Confidence 78889999988653 47899999999999999999999998776655444332211 100 00
Q ss_pred chhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCCCc
Q psy6391 258 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF 309 (313)
Q Consensus 258 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~~~ 309 (313)
....++..+.+++.+||+.||.+||++.++++||||.....++++
T Consensus 238 -------~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~~~~ 282 (292)
T cd06657 238 -------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPSCI 282 (292)
T ss_pred -------CcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCCccc
Confidence 012478899999999999999999999999999999998765543
No 243
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=5.8e-41 Score=281.62 Aligned_cols=254 Identities=29% Similarity=0.530 Sum_probs=212.2
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEec
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
+|++.+.||.|++|.||++.+..+++.+++|.+............+.+|+.+++.++|+||+++++++.+....++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 58999999999999999999998999999999876554444446778899999999999999999999999999999999
Q ss_pred ccc-CHHHHHhhCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 95 MSM-DLKKYIDTVP-KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 95 ~~~-~l~~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
+++ +|.+.+.... ....+++..++.++.|++.||.+||+.|++|+||+|+||+++.++. ++|+|||.+...... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~-~kl~d~g~~~~~~~~--~ 157 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDL-VKIGDLGISKVLKKN--M 157 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCc-EEEeeccchhhhccC--C
Confidence 975 8887775522 2345899999999999999999999999999999999999998776 999999999776544 2
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 252 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
.....++..|+|||.+.+. .++.++|+||+|++++++++|+.||...+.............++..
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~-~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------- 222 (256)
T cd08530 158 AKTQIGTPHYMAPEVWKGR-PYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIP-------------- 222 (256)
T ss_pred cccccCCccccCHHHHCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCc--------------
Confidence 2334678889999998654 4788999999999999999999999987765554444322111110
Q ss_pred cCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 253 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
..++.++.+++.+||+.+|++||++.++++||++
T Consensus 223 --------------~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 223 --------------PIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred --------------hhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 1367899999999999999999999999999985
No 244
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.7e-41 Score=286.21 Aligned_cols=260 Identities=24% Similarity=0.427 Sum_probs=208.6
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
..++|++.+.||+|++|.||++.+..+++.+++|++.... .......+.+|+++++.++||||+++++++...+.+++|
T Consensus 3 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 3 RNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred cHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEE
Confidence 3578999999999999999999999889999999886543 233356788999999999999999999999999999999
Q ss_pred Eecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 92 FEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHK-RRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 92 ~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~-~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
+||+++ +|.+.+.. .+.+++..+..++.+++.++.|||+ .+++|+||+|+||+++.++. ++|+|||++......
T Consensus 82 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~-~~l~d~gl~~~~~~~ 157 (284)
T cd06620 82 MEFMDCGSLDRIYKK---GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQ-IKLCDFGVSGELINS 157 (284)
T ss_pred EecCCCCCHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCc-EEEccCCcccchhhh
Confidence 999986 77666654 3458999999999999999999997 68999999999999998876 999999988654322
Q ss_pred CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChH--------HHHHHHHHhcCCCCCCCC
Q psy6391 170 VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI--------DQLFRIFRVLTTPTEDNW 241 (313)
Q Consensus 170 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~ 241 (313)
. .....++..|+|||.+.+. ..+.++|+||+|+++|++++|..||...... ............ ....+
T Consensus 158 ~--~~~~~~~~~~~aPE~~~~~-~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 233 (284)
T cd06620 158 I--ADTFVGTSTYMSPERIQGG-KYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE-PPPRL 233 (284)
T ss_pred c--cCccccCcccCCHHHHccC-CCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhc-cCCCC
Confidence 1 1234678899999988654 4889999999999999999999999865442 111111111100 00000
Q ss_pred CCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 242 PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
+. ..++.++.+|+.+|++.||.+|||+.|+++|+||.+.
T Consensus 234 ~~-----------------------~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 234 PS-----------------------SDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred Cc-----------------------hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 00 1267889999999999999999999999999999774
No 245
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.6e-40 Score=277.95 Aligned_cols=252 Identities=32% Similarity=0.536 Sum_probs=210.0
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEec
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
+|.+.+.||.|++|.||++.+..+++.+++|++..... .....+.+|+.+++.++|++++++++.+..+...++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~ 78 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF 78 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence 58899999999999999999988899999999976543 2347788999999999999999999999999999999999
Q ss_pred ccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccc
Q psy6391 95 MSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIY 173 (313)
Q Consensus 95 ~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~ 173 (313)
+++ +|.+.+.... ..+++..++.++.|++.++.+||+.|++|+||+|+||+++.++. ++|+|||.+........ .
T Consensus 79 ~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~-~~l~d~~~~~~~~~~~~-~ 154 (253)
T cd05122 79 CSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGE-VKLIDFGLSAQLSDTKA-R 154 (253)
T ss_pred CCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCe-EEEeecccccccccccc-c
Confidence 994 8888776532 45899999999999999999999999999999999999998876 99999999877654432 2
Q ss_pred ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcccc
Q psy6391 174 THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT 253 (313)
Q Consensus 174 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (313)
....++..|+|||.+.... .+.++|+||+|+++|++++|..||......................
T Consensus 155 ~~~~~~~~~~~PE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------- 219 (253)
T cd05122 155 NTMVGTPYWMAPEVINGKP-YDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRN-------------- 219 (253)
T ss_pred cceecCCcccCHHHHcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCc--------------
Confidence 3456788899999887644 7899999999999999999999998775544444333211110000
Q ss_pred CCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCC
Q psy6391 254 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 299 (313)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~ 299 (313)
...++..+.++|.+||+.||++|||+.++++|||
T Consensus 220 ------------~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 220 ------------PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred ------------ccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 0124789999999999999999999999999998
No 246
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.4e-40 Score=288.19 Aligned_cols=259 Identities=26% Similarity=0.441 Sum_probs=213.3
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
..|...+.||+|++|.||++.+..++..+++|.+...... ......+.+|+.+++.++|+|++++++++.++...++||
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 3478889999999999999999888999999998754322 223356888999999999999999999999999999999
Q ss_pred eccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 93 EFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 93 e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
||+.|++.+.+... ..++++.++..++.||+.++.+||+.|++|+||+|+||+++.++. ++|+|||++......
T Consensus 105 e~~~g~l~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~-~kl~dfg~~~~~~~~--- 178 (317)
T cd06635 105 EYCLGSASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQ-VKLADFGSASIASPA--- 178 (317)
T ss_pred eCCCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCC-EEEecCCCccccCCc---
Confidence 99999888776542 345899999999999999999999999999999999999998876 999999988654432
Q ss_pred cccccccccccchhhhcC--CCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCc
Q psy6391 173 YTHEVVTLWYRAPEVLLG--SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY 250 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~--~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (313)
....++..|+|||.+.. ....+.++|+||+|+++|+|++|..||...........+......+...
T Consensus 179 -~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------- 246 (317)
T cd06635 179 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQS----------- 246 (317)
T ss_pred -ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCC-----------
Confidence 23457788999998742 3457889999999999999999999998776655555544422111100
Q ss_pred cccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCC
Q psy6391 251 KTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL 306 (313)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~ 306 (313)
..+++.+.+++.+||+.+|.+||++.++++|+|+......
T Consensus 247 ----------------~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 286 (317)
T cd06635 247 ----------------NEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPE 286 (317)
T ss_pred ----------------ccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCcc
Confidence 2367889999999999999999999999999999875543
No 247
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-41 Score=310.82 Aligned_cols=289 Identities=21% Similarity=0.303 Sum_probs=202.7
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCC-cEEEEEEe--------------c-ccCCCCCCchhHHHHHHHHhhcCCCC
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTG-ALVAIKKI--------------R-MENDDEGIPATAIREISVLKELNHPN 74 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~-~~~~~K~~--------------~-~~~~~~~~~~~~~~e~~~l~~l~~~~ 74 (313)
..+++|++++.||+|+||.||++..+... ...+.|.+ . ...........+.+|+.+++.++|+|
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence 34688999999999999999998764322 12222211 0 00111122345778999999999999
Q ss_pred ceeeceeEEeCcEEEEEEeccccCHHHHHhhCC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCC
Q psy6391 75 IVQLHDTMIENYRLYLIFEFMSMDLKKYIDTVP--KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKS 152 (313)
Q Consensus 75 i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~ 152 (313)
|+++++++.+.+..+++++++.+++...+.... .........++.++.||+.||.|||++||+|+||||+|||++.++
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~ 304 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDG 304 (501)
T ss_pred cCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence 999999999999999999999988877664321 122344677888999999999999999999999999999999887
Q ss_pred CeEEEecCCCccccCCCCc-ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCC-CCCC--ChHHHHHH
Q psy6391 153 NIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPL-FQGD--SEIDQLFR 228 (313)
Q Consensus 153 ~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~p-f~~~--~~~~~~~~ 228 (313)
. ++|+|||++........ ......|+..|+|||++.+.. ++.++||||||+++|+|++|..+ +... .....+.+
T Consensus 305 ~-vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~ 382 (501)
T PHA03210 305 K-IVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDG-YCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLK 382 (501)
T ss_pred C-EEEEeCCCceecCcccccccccccCCcCCCCchhhcCCC-CCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHH
Confidence 7 99999999976643322 222357899999999987644 89999999999999999998754 4322 33344444
Q ss_pred HHHhcCCCCCCCCCCCC-CCCCcc-----ccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 229 IFRVLTTPTEDNWPGVS-KLPDYK-----TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 229 ~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
+......+.. .+++.. .+.++. ...+........ -..++.++.++|.+||+.||.+|||+.|+|+||||+.
T Consensus 383 ~~~~~~~~~~-~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~ 459 (501)
T PHA03210 383 IIDSLSVCDE-EFPDPPCKLFDYIDSAEIDHAGHSVPPLIR--NLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSA 459 (501)
T ss_pred HHHhcccChh-hcCCcHHHHHHHhhhhhcccCccchhhHHH--hcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhc
Confidence 4443322211 111100 000000 000000000000 1247788999999999999999999999999999987
Q ss_pred CC
Q psy6391 303 KT 304 (313)
Q Consensus 303 ~~ 304 (313)
..
T Consensus 460 ~~ 461 (501)
T PHA03210 460 EE 461 (501)
T ss_pred CC
Confidence 43
No 248
>KOG0577|consensus
Probab=100.00 E-value=8e-43 Score=302.52 Aligned_cols=256 Identities=26% Similarity=0.452 Sum_probs=221.6
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
-|.-++.||+|+||.||-+++..+.+.||||.+...... .....++..|+..|+++.|||++.+.|+|..+...|+|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 366678999999999999999999999999999876533 2334789999999999999999999999999999999999
Q ss_pred ccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccc
Q psy6391 94 FMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIY 173 (313)
Q Consensus 94 ~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~ 173 (313)
||-|+-.+++.... +++.+-++..+.++.+.||+|||+.+.+|+|||..|||++..|. |||+|||.+....+.
T Consensus 107 YClGSAsDlleVhk--KplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~-VKLaDFGSAsi~~PA---- 179 (948)
T KOG0577|consen 107 YCLGSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGL-VKLADFGSASIMAPA---- 179 (948)
T ss_pred HHhccHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCe-eeeccccchhhcCch----
Confidence 99998778887743 45899999999999999999999999999999999999999877 999999999776543
Q ss_pred ccccccccccchhhhc--CCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcc
Q psy6391 174 THEVVTLWYRAPEVLL--GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK 251 (313)
Q Consensus 174 ~~~~~~~~~~~PE~~~--~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (313)
...+||+.|||||++. ..+.++-+.||||||++..+|...++|+-..+....++.+.....+....
T Consensus 180 nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs------------ 247 (948)
T KOG0577|consen 180 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQS------------ 247 (948)
T ss_pred hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCC------------
Confidence 5679999999999984 34568999999999999999999999988887777777776643333221
Q ss_pred ccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCC
Q psy6391 252 TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 304 (313)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~ 304 (313)
..-|..+..|+..||++-|.+|||.+++|.|+|.....
T Consensus 248 ---------------~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~R 285 (948)
T KOG0577|consen 248 ---------------NEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRER 285 (948)
T ss_pred ---------------chhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCC
Confidence 13468889999999999999999999999999998754
No 249
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.7e-40 Score=279.12 Aligned_cols=248 Identities=26% Similarity=0.350 Sum_probs=201.4
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
.++|++.+.||+|++|.||++.++ ++..+++|.+...... ...+.+|+.+++.++||||+++++++...+..+++|
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~ 78 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVT 78 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEE
Confidence 478999999999999999999886 4567999987644322 367889999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
||+++ +|.+.+... ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||.+........
T Consensus 79 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~-~kl~d~g~~~~~~~~~~ 155 (256)
T cd05114 79 EFMENGCLLNYLRQR--QGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGV-VKVSDFGMTRYVLDDEY 155 (256)
T ss_pred EcCCCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCe-EEECCCCCccccCCCce
Confidence 99974 787777642 235889999999999999999999999999999999999998766 99999998876532221
Q ss_pred c-cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy6391 172 I-YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 249 (313)
Q Consensus 172 ~-~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (313)
. .....++..|+|||.+... .++.++|+||+|+++|++++ |+.||...+.......+........+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~----------- 223 (256)
T cd05114 156 TSSSGAKFPVKWSPPEVFNFS-KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRP----------- 223 (256)
T ss_pred eccCCCCCchhhCChhhcccC-ccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCC-----------
Confidence 1 1122345679999998654 47899999999999999999 89999888776666665442111100
Q ss_pred ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 250 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...+.++.+++.+||+.+|++||++.++++
T Consensus 224 -----------------~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 224 -----------------KLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred -----------------CCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 125678999999999999999999999985
No 250
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.5e-40 Score=280.49 Aligned_cols=252 Identities=27% Similarity=0.374 Sum_probs=204.7
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEE
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYL 90 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 90 (313)
....+|.+.+.||+|++|.||+|.++.++..+++|.+...... ...+.+|+.+++.++|++++++++++..++..++
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 79 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 79 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchH---HHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEE
Confidence 3456799999999999999999999888999999998644222 3568899999999999999999999999999999
Q ss_pred EEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 91 IFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 91 v~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
+|||+++ +|.+.+.... ...+++..+..++.|++.+|.+||+.|++|+||+|+||+++.++. ++|+|||.+......
T Consensus 80 v~e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~-~kl~df~~~~~~~~~ 157 (263)
T cd05052 80 ITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGD 157 (263)
T ss_pred EEEeCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCc-EEeCCCccccccccc
Confidence 9999974 8888776532 345889999999999999999999999999999999999988876 999999998766433
Q ss_pred Cccc-ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCC
Q psy6391 170 VRIY-THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 247 (313)
Q Consensus 170 ~~~~-~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
.... ....++..|+|||.+.+. ..+.++|+||||+++|+|++ |..||......+............
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~----------- 225 (263)
T cd05052 158 TYTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRME----------- 225 (263)
T ss_pred eeeccCCCCCccccCCHHHhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCC-----------
Confidence 2111 112235579999988654 47889999999999999998 999998776655544443211110
Q ss_pred CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 248 PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
. ...++.++.++|.+||+.||++||++.++++
T Consensus 226 ------~-----------~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 226 ------R-----------PEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred ------C-----------CCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 0 0247899999999999999999999999975
No 251
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=9.4e-41 Score=288.07 Aligned_cols=258 Identities=26% Similarity=0.439 Sum_probs=210.3
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
-..|+..+.||.|++|.||+|.+..++..+++|.+..... .......+.+|+.+++.++|++++++++++..+...++|
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 93 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 93 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEE
Confidence 3458888999999999999999998899999999865422 222235677899999999999999999999999999999
Q ss_pred EeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 92 FEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 92 ~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
+||+.|++.+.+... ...+++..+..++.|++.++.+||+.|++|+||+|+||+++.++. ++|+|||++......
T Consensus 94 ~e~~~~~l~~~~~~~--~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~-~kl~dfg~~~~~~~~-- 168 (308)
T cd06634 94 MEYCLGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGL-VKLGDFGSASIMAPA-- 168 (308)
T ss_pred EEccCCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCc-EEECCcccceeecCc--
Confidence 999999887776542 345889999999999999999999999999999999999998876 999999998765432
Q ss_pred ccccccccccccchhhhcC--CCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy6391 172 IYTHEVVTLWYRAPEVLLG--SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 249 (313)
Q Consensus 172 ~~~~~~~~~~~~~PE~~~~--~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (313)
....++..|+|||.+.+ ....+.++||||||+++|++++|..||...+.............+...
T Consensus 169 --~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------- 235 (308)
T cd06634 169 --NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQ----------- 235 (308)
T ss_pred --ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcC-----------
Confidence 23457788999998742 234788999999999999999999999876554444433322111100
Q ss_pred ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCC
Q psy6391 250 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 304 (313)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~ 304 (313)
...++..+.++|.+||+.+|.+||++.+++.|||+....
T Consensus 236 ----------------~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~ 274 (308)
T cd06634 236 ----------------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (308)
T ss_pred ----------------cccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence 024678899999999999999999999999999998853
No 252
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.7e-40 Score=279.37 Aligned_cols=255 Identities=29% Similarity=0.501 Sum_probs=205.7
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
+++|++.+.||.|++|.||+|.+..+++.|++|.++..... ......+.+|+.++++++|++++++++++.+++..+++
T Consensus 1 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 1 LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CCceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 36899999999999999999999989999999998754322 22346788999999999999999999999999999999
Q ss_pred Eecccc-CHHHHHhhCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 92 FEFMSM-DLKKYIDTVP-KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 92 ~e~~~~-~l~~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
|||+++ +|.+.+.... ....+++.++..++.+++.++.+||+.|++|+||+|+||+++.++. ++|+|||.+......
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~-~~l~d~~~~~~~~~~ 159 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGV-VKLGDLGLGRFFSSK 159 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCc-EEEeccceeeeccCC
Confidence 999985 8888776532 3455899999999999999999999999999999999999998877 999999998765443
Q ss_pred CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHhcCCCCCCCCCCCCCC
Q psy6391 170 VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE--IDQLFRIFRVLTTPTEDNWPGVSKL 247 (313)
Q Consensus 170 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
........++..|+|||.+.+. .++.++|+||+|+++|++++|..||..... .............+.+
T Consensus 160 ~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--------- 229 (267)
T cd08224 160 TTAAHSLVGTPYYMSPERIHEN-GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLP--------- 229 (267)
T ss_pred CcccceecCCccccCHHHhccC-CCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCC---------
Confidence 3333344678889999988654 478999999999999999999999965432 1222221111110000
Q ss_pred CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 248 PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...++.++.++|.+||+.+|++||++.++++
T Consensus 230 ------------------~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 230 ------------------ADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred ------------------hhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 0146789999999999999999999999875
No 253
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=6.9e-41 Score=283.12 Aligned_cols=255 Identities=29% Similarity=0.491 Sum_probs=204.8
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
+++|++.+.||.|++|.||++.+..++..+++|.+..... .......+.+|+.+++.++|+||+++++++..++..+++
T Consensus 1 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 1 LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 80 (267)
T ss_pred CchhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEE
Confidence 4689999999999999999999988999999998865432 222235778899999999999999999999999999999
Q ss_pred Eecccc-CHHHHHhhCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 92 FEFMSM-DLKKYIDTVP-KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 92 ~e~~~~-~l~~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
+|++.+ +|.+++.... ....+++..++.++.||+.++.|||+.|++|+||+|+||+++.++. ++|+|||.+......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~-~~l~dfg~~~~~~~~ 159 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGV-VKLGDLGLGRFFSSK 159 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCC-EEECcchhhhccccC
Confidence 999986 8888776432 2456899999999999999999999999999999999999998876 999999988766443
Q ss_pred CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHhcCCCCCCCCCCCCCC
Q psy6391 170 VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI--DQLFRIFRVLTTPTEDNWPGVSKL 247 (313)
Q Consensus 170 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
........++..|+|||.+.+.. .+.++|+||+|+++|+|++|..||...... ......... ..+...
T Consensus 160 ~~~~~~~~~~~~~~ape~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~-------- 229 (267)
T cd08229 160 TTAAHSLVGTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC-DYPPLP-------- 229 (267)
T ss_pred CcccccccCCcCccCHHHhcCCC-ccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC-CCCCCC--------
Confidence 33333456788899999886644 789999999999999999999999754332 222221111 100000
Q ss_pred CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 248 PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...++.++.+++.+||+.||++|||+.++++
T Consensus 230 ------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 230 ------------------SDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred ------------------cccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 0236789999999999999999999998764
No 254
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=9.3e-41 Score=281.64 Aligned_cols=249 Identities=32% Similarity=0.514 Sum_probs=206.3
Q ss_pred eccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc-CH
Q psy6391 22 IGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM-DL 99 (313)
Q Consensus 22 lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~-~l 99 (313)
||.|++|.||++.+..+++.+++|++..... .......+.+|+.++++++|+|++++++.+..++..++++|++.+ +|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 6899999999999998899999999875532 223346788899999999999999999999999999999999975 88
Q ss_pred HHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc--------
Q psy6391 100 KKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR-------- 171 (313)
Q Consensus 100 ~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~-------- 171 (313)
.+.+.... .+++..+..++.||+.+|.+||+.|++|+||+|+||+++.++. ++|+|||++........
T Consensus 81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~-~~l~dfg~~~~~~~~~~~~~~~~~~ 156 (265)
T cd05579 81 ASLLENVG---SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGH-LKLTDFGLSKVGLVRRQINLNDDEK 156 (265)
T ss_pred HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCC-EEEEecccchhcccCcccccccccc
Confidence 88877533 5899999999999999999999999999999999999999877 99999998876533211
Q ss_pred ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcc
Q psy6391 172 IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK 251 (313)
Q Consensus 172 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (313)
......++..|++||...... .+.++|+||||+++|++++|..||.................. .+..
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~----------- 223 (265)
T cd05579 157 EDKRIVGTPDYIAPEVILGQG-HSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIE-WPED----------- 223 (265)
T ss_pred cccCcccCccccCHHHhcCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcC-CCcc-----------
Confidence 223345678899999886644 789999999999999999999999988776666555431111 0000
Q ss_pred ccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCH---HHHhcCCCCCC
Q psy6391 252 TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINA---ENALKHKYFAD 302 (313)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~---~e~l~h~~~~~ 302 (313)
..++..+.+++.+||+.+|.+|||+ .++|+||||++
T Consensus 224 ---------------~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~ 262 (265)
T cd05579 224 ---------------VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKG 262 (265)
T ss_pred ---------------ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccC
Confidence 1257999999999999999999999 99999999985
No 255
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=5.5e-41 Score=296.46 Aligned_cols=260 Identities=20% Similarity=0.317 Sum_probs=202.8
Q ss_pred chhhhhhccceeeeeeccccceEEEEEEeCc-----CCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeece
Q psy6391 7 DDVKSRLEDYEKVEKIGEGTYGVVYKAKNKV-----TGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHD 80 (313)
Q Consensus 7 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~ 80 (313)
.+|....++|++.+.||+|+||.||++.+.. ++..||+|.++..... .....+.+|+.+++.+ +|+||+++++
T Consensus 31 ~~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~il~~l~~h~nIv~~~~ 109 (374)
T cd05106 31 EKWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT-DEREALMSELKILSHLGQHKNIVNLLG 109 (374)
T ss_pred ccccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH-HHHHHHHHHHHHHHhhccCCceeeEee
Confidence 3456667899999999999999999998643 3357999999754322 2235678999999999 8999999999
Q ss_pred eEEeCcEEEEEEecccc-CHHHHHhhCC----------------------------------------------------
Q psy6391 81 TMIENYRLYLIFEFMSM-DLKKYIDTVP---------------------------------------------------- 107 (313)
Q Consensus 81 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~---------------------------------------------------- 107 (313)
++...+..++||||+.+ +|.+.+....
T Consensus 110 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (374)
T cd05106 110 ACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSS 189 (374)
T ss_pred EecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccc
Confidence 99999999999999975 8877765321
Q ss_pred ---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc-
Q psy6391 108 ---------------KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR- 171 (313)
Q Consensus 108 ---------------~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~- 171 (313)
...++++.+++.++.||+.||.|||++|++|+||||+|||++.++. ++|+|||++........
T Consensus 190 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~-~kL~DfGla~~~~~~~~~ 268 (374)
T cd05106 190 SSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRV-AKICDFGLARDIMNDSNY 268 (374)
T ss_pred cccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCe-EEEeeceeeeeccCCcce
Confidence 1134788899999999999999999999999999999999998765 99999999876533221
Q ss_pred -ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy6391 172 -IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 249 (313)
Q Consensus 172 -~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (313)
......++..|+|||.+... .++.++||||+|+++|+|++ |..||..................+..
T Consensus 269 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~----------- 336 (374)
T cd05106 269 VVKGNARLPVKWMAPESIFDC-VYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSR----------- 336 (374)
T ss_pred eeccCCCCccceeCHHHhcCC-CCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccC-----------
Confidence 11112235679999998654 48999999999999999997 99999876554443333332111110
Q ss_pred ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 250 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
+ ..+++++.+++.+||+.||.+|||+.++++
T Consensus 337 -----~-----------~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 337 -----P-----------DFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred -----C-----------CCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0 136799999999999999999999999975
No 256
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.9e-40 Score=282.25 Aligned_cols=249 Identities=25% Similarity=0.375 Sum_probs=194.7
Q ss_pred eeccccceEEEEEEeCcCCcEEEEEEecccCCCCCC-chhHHHHHHHHhh---cCCCCceeeceeEEeCcEEEEEEeccc
Q psy6391 21 KIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGI-PATAIREISVLKE---LNHPNIVQLHDTMIENYRLYLIFEFMS 96 (313)
Q Consensus 21 ~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~-~~~~~~e~~~l~~---l~~~~i~~~~~~~~~~~~~~lv~e~~~ 96 (313)
.||+|++|.||++.+..+++.+++|.+......... .....++..+++. .+|++++.+++++..++..++||||+.
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999999988999999998765432211 1233444444443 479999999999999999999999998
Q ss_pred c-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccccc
Q psy6391 97 M-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTH 175 (313)
Q Consensus 97 ~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~ 175 (313)
+ +|.+.+.. .+.+++..+..++.|++.||.|||+.|++|+||||+||+++.++. ++|+|||++........ ..
T Consensus 81 ~~~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~-~~l~dfg~~~~~~~~~~--~~ 154 (279)
T cd05633 81 GGDLHYHLSQ---HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKP--HA 154 (279)
T ss_pred CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCC-EEEccCCcceeccccCc--cC
Confidence 6 77666654 345899999999999999999999999999999999999998876 99999999865543222 33
Q ss_pred ccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHhcCCCCCCCCCCCCCCCCcccc
Q psy6391 176 EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEID--QLFRIFRVLTTPTEDNWPGVSKLPDYKTT 253 (313)
Q Consensus 176 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (313)
..|+..|+|||.+.....++.++|+||+|+++|++++|..||....... ........ . ...
T Consensus 155 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~--~--~~~------------- 217 (279)
T cd05633 155 SVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--V--NVE------------- 217 (279)
T ss_pred cCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhc--C--CcC-------------
Confidence 4688999999988654557899999999999999999999997543321 11111110 0 000
Q ss_pred CCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCC-----CHHHHhcCCCCCCC
Q psy6391 254 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK 303 (313)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~e~l~h~~~~~~ 303 (313)
. ...++.++.++|++||+.||.+|| ++.++++||||++.
T Consensus 218 ~-----------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~ 261 (279)
T cd05633 218 L-----------PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGI 261 (279)
T ss_pred C-----------ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCC
Confidence 0 024789999999999999999999 69999999999983
No 257
>KOG0586|consensus
Probab=100.00 E-value=6.3e-42 Score=298.88 Aligned_cols=262 Identities=29% Similarity=0.468 Sum_probs=229.6
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcE
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYR 87 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 87 (313)
.-...+.-|.+.+.||+|.|+.|..+++..++..||+|.+.+........+.+.+|+++++.++||||++++.+.+....
T Consensus 50 ~~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ 129 (596)
T KOG0586|consen 50 DDSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEAT 129 (596)
T ss_pred cccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecce
Confidence 34556789999999999999999999999999999999999887777666778999999999999999999999999999
Q ss_pred EEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 88 LYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 88 ~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
+|+||||+.+ .+.+++.. ++.+.+..++..+.|+..|++|||+++|+|+|||++|+|++.+-+ ++|+|||++...
T Consensus 130 lylV~eya~~ge~~~yl~~---~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mn-ikIaDfgfS~~~ 205 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVK---HGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMN-IKIADFGFSTFF 205 (596)
T ss_pred eEEEEEeccCchhHHHHHh---cccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccc-eeeeccccceee
Confidence 9999999986 66666654 555778999999999999999999999999999999999999988 999999999988
Q ss_pred CCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 167 GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
... ......+|++.|.|||++.+..+.++..|+|++|+++|.|+.|..||++.+-.....+.......
T Consensus 206 ~~~-~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~r----------- 273 (596)
T KOG0586|consen 206 DYG-LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYR----------- 273 (596)
T ss_pred ccc-ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeec-----------
Confidence 743 55577899999999999998888899999999999999999999999987665555544432111
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
++ .-++.+..++|+++|..+|.+|++.+++..|.|.+..
T Consensus 274 -------Ip-----------~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 274 -------IP-----------FYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL 312 (596)
T ss_pred -------cc-----------ceeechhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence 11 1378899999999999999999999999999999874
No 258
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2e-40 Score=279.35 Aligned_cols=252 Identities=23% Similarity=0.371 Sum_probs=204.7
Q ss_pred hhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEE
Q psy6391 10 KSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLY 89 (313)
Q Consensus 10 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 89 (313)
....++|++.++||+|++|.||+|... ++..+++|.+...... .+.+.+|+.+++.++|+||+++++.+.+.+..+
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05072 2 EIPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMS---VQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIY 77 (261)
T ss_pred cCchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchh---HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcE
Confidence 345789999999999999999999875 5567999987653322 467889999999999999999999999999999
Q ss_pred EEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCC
Q psy6391 90 LIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGV 168 (313)
Q Consensus 90 lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~ 168 (313)
+++||+. ++|.+.+... ....++...+..++.|++.+|+|||+.|++|+||+|+||+++.++. ++|+|||.+.....
T Consensus 78 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~-~~l~dfg~~~~~~~ 155 (261)
T cd05072 78 IITEYMAKGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLM-CKIADFGLARVIED 155 (261)
T ss_pred EEEecCCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCc-EEECCCccceecCC
Confidence 9999997 4888877653 2345888999999999999999999999999999999999998876 99999999976543
Q ss_pred CCc-ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 169 PVR-IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 169 ~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
... ......++..|+|||.+... ..+.++|+||||+++|+|++ |..||...........+......+.
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~--------- 225 (261)
T cd05072 156 NEYTAREGAKFPIKWTAPEAINFG-SFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPR--------- 225 (261)
T ss_pred CceeccCCCccceecCCHHHhccC-CCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCC---------
Confidence 221 11222345679999988654 47889999999999999998 9999988776665555443211111
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...++.++.+++.+|++.+|++||+++++++
T Consensus 226 -------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 226 -------------------MENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred -------------------CCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0246789999999999999999999999874
No 259
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=282.74 Aligned_cols=241 Identities=18% Similarity=0.195 Sum_probs=197.0
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCCCC-CCchhHHHHHHHHhhcCCCCceeeceeEEe----CcEEEEEEec
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDE-GIPATAIREISVLKELNHPNIVQLHDTMIE----NYRLYLIFEF 94 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~lv~e~ 94 (313)
..+|+|+++.||+|.. +|+.||+|+++...... ...+.+.+|+.++++++||||+++++++.+ ....++||||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 6789999999999988 48899999997654322 123567799999999999999999999877 3578999999
Q ss_pred ccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 95 MSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKR-RVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 95 ~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~-~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
+.+ +|.+.+.. .+.+++.....++.+++.++.+||+. +++|+||||+||+++.++. ++|+|||++.......
T Consensus 104 ~~~g~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~-~kl~dfg~~~~~~~~~-- 177 (283)
T PHA02988 104 CTRGYLREVLDK---EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYK-LKIICHGLEKILSSPP-- 177 (283)
T ss_pred CCCCcHHHHHhh---CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCc-EEEcccchHhhhcccc--
Confidence 986 78887764 34588999999999999999999984 9999999999999999876 9999999987654321
Q ss_pred cccccccccccchhhhcCC-CCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcc
Q psy6391 173 YTHEVVTLWYRAPEVLLGS-QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK 251 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~-~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (313)
....++..|+|||.+.+. ..++.++||||||+++|+|++|..||...+..+....+......+..+
T Consensus 178 -~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~------------ 244 (283)
T PHA02988 178 -FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLP------------ 244 (283)
T ss_pred -ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC------------
Confidence 234678889999998652 358999999999999999999999999887766665554322211110
Q ss_pred ccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 252 TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...++++.+|+.+||+.||++|||+.++++
T Consensus 245 ---------------~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 245 ---------------LDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred ---------------CcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 136789999999999999999999999985
No 260
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.8e-40 Score=277.80 Aligned_cols=249 Identities=23% Similarity=0.326 Sum_probs=201.6
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
.++|++.+.||+|++|.||.+.+.. +..+++|.+...... ...+.+|+.+++.++||||+++++++...+..+++|
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVT 78 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCccc---HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEE
Confidence 4689999999999999999998763 446999988644322 367889999999999999999999999888999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
||+.+ +|.+.+.... ..+++.+++.++.||+.||.|||+.|++|+||+|+||+++.++. ++|+|||.+.....+..
T Consensus 79 e~~~~~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~-~kl~d~g~~~~~~~~~~ 155 (256)
T cd05113 79 EYMSNGCLLNYLREHG--KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGC-VKVSDFGLSRYVLDDEY 155 (256)
T ss_pred EcCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCC-EEECCCccceecCCCce
Confidence 99975 7888776532 25899999999999999999999999999999999999998776 99999998875533221
Q ss_pred -ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy6391 172 -IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 249 (313)
Q Consensus 172 -~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (313)
......++..|+|||.+.+.. ++.++|+||||+++|+|++ |..||...........+.........
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~-~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------- 223 (256)
T cd05113 156 TSSVGSKFPVRWSPPEVLLYSK-FSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRP----------- 223 (256)
T ss_pred eecCCCccChhhCCHHHHhcCc-ccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCC-----------
Confidence 111223456799999986544 7889999999999999998 99999877766555555432111110
Q ss_pred ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 250 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
...+..+.+++.+||+.||.+||++.+++.+
T Consensus 224 -----------------~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 224 -----------------HLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred -----------------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 1257899999999999999999999999864
No 261
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.5e-40 Score=282.85 Aligned_cols=263 Identities=21% Similarity=0.335 Sum_probs=207.0
Q ss_pred hhhhccceeeeeeccccceEEEEEEeCc-----CCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEe
Q psy6391 10 KSRLEDYEKVEKIGEGTYGVVYKAKNKV-----TGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIE 84 (313)
Q Consensus 10 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 84 (313)
....++|++.+.||+|++|.||+|..+. .+..|++|.+...... .....+.+|+.+++.++|+||+++++++.+
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 80 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL-RERIEFLNEASVMKGFTCHHVVRLLGVVSK 80 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCH-HHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 4456899999999999999999997642 3457999987644321 123457789999999999999999999999
Q ss_pred CcEEEEEEeccc-cCHHHHHhhCCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEE
Q psy6391 85 NYRLYLIFEFMS-MDLKKYIDTVPK-------GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVK 156 (313)
Q Consensus 85 ~~~~~lv~e~~~-~~l~~~~~~~~~-------~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~ 156 (313)
.+..++||||+. |+|.+.+..... ....+...+..++.||+.||.|||++|++|+||||+||+++.++. ++
T Consensus 81 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~-~~ 159 (288)
T cd05061 81 GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFT-VK 159 (288)
T ss_pred CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCc-EE
Confidence 999999999997 588888865321 123567788999999999999999999999999999999998876 99
Q ss_pred EecCCCccccCCCCc--ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhc
Q psy6391 157 VADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVL 233 (313)
Q Consensus 157 l~df~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~ 233 (313)
|+|||++........ ......++..|+|||.+.+. ..+.++|+||+|+++|++++ |..||......+....+....
T Consensus 160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~-~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~ 238 (288)
T cd05061 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG-VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG 238 (288)
T ss_pred ECcCCccccccccccccccCCCcccccccCHHHhccC-CCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence 999999875432211 11122345679999988654 47899999999999999998 788998877666555443321
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc------CCCCCCC
Q psy6391 234 TTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK------HKYFADK 303 (313)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~------h~~~~~~ 303 (313)
..... ..+++.+.+++.+||+.||.+|||+.++++ ||||.+.
T Consensus 239 ~~~~~----------------------------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 239 YLDQP----------------------------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred CCCCC----------------------------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 11100 135789999999999999999999999987 9999874
No 262
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.2e-40 Score=284.23 Aligned_cols=266 Identities=26% Similarity=0.421 Sum_probs=210.4
Q ss_pred chhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEeC
Q psy6391 7 DDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIEN 85 (313)
Q Consensus 7 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~ 85 (313)
..+...+++|++.+.||.|++|.||+|.+..+++.|++|.++...... ....+..|+.++... +|+||+++++++.++
T Consensus 8 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~ 86 (296)
T cd06618 8 QKYPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE-ENKRILMDLDVVLKSHDCPYIVKCYGYFITD 86 (296)
T ss_pred eeccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChH-HHHHHHHHHHHHHhccCCCchHhhheeeecC
Confidence 455678899999999999999999999999889999999987543222 234556677766666 599999999999999
Q ss_pred cEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCCEEEecCCCeEEEecCCCcc
Q psy6391 86 YRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHK-RRVLHRDLKPQNLLIDAKSNIVKVADFGLAR 164 (313)
Q Consensus 86 ~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~-~~i~H~di~~~Nil~~~~~~~~~l~df~~~~ 164 (313)
...+++||++++++.+++.... ..+++..+..++.||+.++.|||+ .|++|+||+|+||+++.++. ++|+|||.+.
T Consensus 87 ~~~~~v~e~~~~~l~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~-~kL~dfg~~~ 163 (296)
T cd06618 87 SDVFICMELMSTCLDKLLKRIQ--GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGN-VKLCDFGISG 163 (296)
T ss_pred CeEEEEeeccCcCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCC-EEECccccch
Confidence 9999999999988888776633 368999999999999999999997 59999999999999998876 9999999987
Q ss_pred ccCCCCcccccccccccccchhhhcCC---CCCCcchhHhHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCCCCC
Q psy6391 165 AFGVPVRIYTHEVVTLWYRAPEVLLGS---QRYSCPVDVWSIGCIFAEIATRKPLFQGDSE-IDQLFRIFRVLTTPTEDN 240 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~PE~~~~~---~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~ 240 (313)
........ ....++..|+|||.+.+. ...+.++|+||+|+++|+|++|+.||..... .+...+........
T Consensus 164 ~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~---- 238 (296)
T cd06618 164 RLVDSKAK-TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPS---- 238 (296)
T ss_pred hccCCCcc-cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCC----
Confidence 65432221 233567789999998643 2468899999999999999999999976433 22333332211100
Q ss_pred CCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 241 WPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
.+. ...++.++.+|+.+||+.||.+||++.+++.||||...
T Consensus 239 ~~~----------------------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 279 (296)
T cd06618 239 LPP----------------------NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRY 279 (296)
T ss_pred CCC----------------------CCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhcc
Confidence 000 01367899999999999999999999999999999873
No 263
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.6e-40 Score=279.75 Aligned_cols=250 Identities=28% Similarity=0.409 Sum_probs=199.5
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHH-hhcCCCCceeeceeEEeCcEEEEEEecccc
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVL-KELNHPNIVQLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l-~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (313)
+.||.|++|.||+|.+..+++.|++|++...... ......+..|..++ ...+|+|++++++++..++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5799999999999999888999999998754321 11122344454444 445899999999999999999999999976
Q ss_pred -CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccc
Q psy6391 98 -DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHE 176 (313)
Q Consensus 98 -~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~ 176 (313)
+|.+++... +.+++..+..++.||+.||.|||+.|++|+||+|+||+++.++. ++|+|||.+...... ...
T Consensus 82 ~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~-~~l~dfg~~~~~~~~----~~~ 153 (260)
T cd05611 82 GDCASLIKTL---GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGH-LKLTDFGLSRNGLEN----KKF 153 (260)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCc-EEEeecccceecccc----ccC
Confidence 888877652 35899999999999999999999999999999999999998876 999999988654321 234
Q ss_pred cccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCC
Q psy6391 177 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE 256 (313)
Q Consensus 177 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (313)
.++..|+|||.+.+.. ++.++|+||+|+++|++++|..||...+.......+..........
T Consensus 154 ~~~~~y~~pe~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------------- 215 (260)
T cd05611 154 VGTPDYLAPETILGVG-DDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEE----------------- 215 (260)
T ss_pred CCCcCccChhhhcCCC-CcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCc-----------------
Confidence 5678899999987654 7899999999999999999999998877766555543321110000
Q ss_pred CchhhhhhhccCCCHHHHHHHHHHhccCCCCCC---CHHHHhcCCCCCCC
Q psy6391 257 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI---NAENALKHKYFADK 303 (313)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp---s~~e~l~h~~~~~~ 303 (313)
....+++++.++|.+||+.||++|| ++.|+++||||++.
T Consensus 216 --------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 216 --------VKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred --------ccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence 0124789999999999999999999 55899999999873
No 264
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.3e-40 Score=280.43 Aligned_cols=251 Identities=24% Similarity=0.361 Sum_probs=207.8
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
--.+|++.+.||.|++|.||.|.+.. +..+++|++...... ....+.+|+.+++.++|+|++++++++.+.+..+++
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLL--KQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchh--hHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 34679999999999999999999986 788999998755432 246788999999999999999999999999999999
Q ss_pred Eecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCC
Q psy6391 92 FEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV 170 (313)
Q Consensus 92 ~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~ 170 (313)
|||+++ +|.+.+... .+..+++.++..++.||+.|+.|||+.|++|+||+|+||+++.++. ++|+|||.+.......
T Consensus 81 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~-~kl~d~g~~~~~~~~~ 158 (261)
T cd05148 81 TELMEKGSLLAFLRSP-EGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLV-CKVADFGLARLIKEDV 158 (261)
T ss_pred EeecccCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCce-EEEccccchhhcCCcc
Confidence 999985 888888753 2456899999999999999999999999999999999999998876 9999999997664433
Q ss_pred cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy6391 171 RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 249 (313)
Q Consensus 171 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (313)
.......++..|+|||.+... .++.++|+||||+++|++++ |+.||......+....+......+..
T Consensus 159 ~~~~~~~~~~~~~~PE~~~~~-~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------- 226 (261)
T cd05148 159 YLSSDKKIPYKWTAPEAASHG-TFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCP----------- 226 (261)
T ss_pred ccccCCCCceEecCHHHHccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCC-----------
Confidence 222333456779999988654 47899999999999999998 89999887766666555432111110
Q ss_pred ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 250 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
..+++++.+++.+||+.||.+|||+.++++
T Consensus 227 -----------------~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 227 -----------------AKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred -----------------CCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 247899999999999999999999999875
No 265
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=5.5e-41 Score=292.06 Aligned_cols=283 Identities=20% Similarity=0.275 Sum_probs=203.6
Q ss_pred eeeccc--cceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc
Q psy6391 20 EKIGEG--TYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 20 ~~lg~g--~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (313)
..||+| ++|+||.+.+..+++.|++|++..........+.+.+|+.+++.++||||+++++++..++..++++||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456666 889999999998999999999876554433346788899999999999999999999999999999999985
Q ss_pred -CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC---Ccc-
Q psy6391 98 -DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP---VRI- 172 (313)
Q Consensus 98 -~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~---~~~- 172 (313)
++.+++.... ...+++..+..++.||+.||.|||+.|++|+||||+||+++.++. ++++||+.+...... ...
T Consensus 84 ~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 161 (328)
T cd08226 84 GSANSLLKTYF-PEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGL-VSLSGLSHLYSLVRNGQKAKVV 161 (328)
T ss_pred CCHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCc-EEEechHHHhhhhccCcccccc
Confidence 8887776543 234889999999999999999999999999999999999998876 999999754332111 000
Q ss_pred ---cccccccccccchhhhcCC-CCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy6391 173 ---YTHEVVTLWYRAPEVLLGS-QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 248 (313)
Q Consensus 173 ---~~~~~~~~~~~~PE~~~~~-~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
.....++..|+|||.+.+. ..++.++|+||+|+++|++++|..||...................+...........
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (328)
T cd08226 162 YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEES 241 (328)
T ss_pred ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhh
Confidence 0111235569999998653 346899999999999999999999998776554444333321111100000000000
Q ss_pred Ccccc----------------CCCCc--hhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCC
Q psy6391 249 DYKTT----------------FPEWS--NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 304 (313)
Q Consensus 249 ~~~~~----------------~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~ 304 (313)
.+... ..... ..........+++.+.+|+++||+.||++|||+.++|+||||.+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~ 315 (328)
T cd08226 242 RMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK 315 (328)
T ss_pred hhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence 00000 00000 0000001124678899999999999999999999999999998743
No 266
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=2.6e-40 Score=278.50 Aligned_cols=255 Identities=26% Similarity=0.467 Sum_probs=204.8
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC---CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND---DEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
+|.+.+.||+|++|.||++.+...+..+++|+++.... .......+..|+.+++.++|||++++++++.+....+++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 58999999999999999999887777677777654322 222234566789999999999999999999999999999
Q ss_pred Eecccc-CHHHHHhhC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 92 FEFMSM-DLKKYIDTV-PKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 92 ~e~~~~-~l~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
+||+.+ +|.+.+... .....+++..++.++.|++.|+.+||+.|++|+||+|+||+++.+ . ++|+|||.+......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~-~-~~l~d~g~~~~~~~~ 158 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNN-L-LKIGDFGVSRLLMGS 158 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecC-C-EeecccCceeecCCC
Confidence 999986 777776542 234568999999999999999999999999999999999999753 4 999999998766443
Q ss_pred CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy6391 170 VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 249 (313)
Q Consensus 170 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (313)
........++..|+|||.+... ..+.++|+||+|++++++++|..||.................+..+
T Consensus 159 ~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 226 (260)
T cd08222 159 CDLATTFTGTPYYMSPEALKHQ-GYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLP----------- 226 (260)
T ss_pred cccccCCCCCcCccCHHHHccC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCCc-----------
Confidence 3333344567889999988654 3788999999999999999999999876665555444322111100
Q ss_pred ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 250 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
..++.++.++|.+|++.||++||++.++++||||
T Consensus 227 -----------------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 227 -----------------ETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred -----------------chhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 2467899999999999999999999999999997
No 267
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=7.2e-40 Score=276.02 Aligned_cols=250 Identities=24% Similarity=0.392 Sum_probs=203.5
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
..++|++.+.||.|++|.||++.+. ++..|++|.++..... ...+.+|+.++++++|+|++++++++...+..+++
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMD---PKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIV 79 (261)
T ss_pred chhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCccc---HHHHHHHHHHHHHCCCCCccceeEEEecCCCeeee
Confidence 4567999999999999999999976 4567999998754322 36788999999999999999999999999999999
Q ss_pred Eeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCC
Q psy6391 92 FEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV 170 (313)
Q Consensus 92 ~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~ 170 (313)
||++. ++|.+.+.... ...+++..+..++.|++.|+.+||+.|++|+||+|+||+++.++. ++|+|||++.......
T Consensus 80 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~-~~l~dfg~~~~~~~~~ 157 (261)
T cd05068 80 TELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNI-CKVADFGLARVIKEDI 157 (261)
T ss_pred eecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCC-EEECCcceEEEccCCc
Confidence 99995 58888876533 345899999999999999999999999999999999999998877 9999999997765321
Q ss_pred cc-cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy6391 171 RI-YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 248 (313)
Q Consensus 171 ~~-~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
.. ......+..|+|||.+.+. .++.++|+||||+++|++++ |+.||...........+......+..
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------- 226 (261)
T cd05068 158 YEAREGAKFPIKWTAPEAALYN-RFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCP---------- 226 (261)
T ss_pred ccccCCCcCceeccCccccccC-CCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC----------
Confidence 11 1111223579999988654 48899999999999999999 99999887766665555432111110
Q ss_pred CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 249 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
..++..+.+++.+|++.+|++||++.++++
T Consensus 227 ------------------~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 227 ------------------PGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred ------------------CcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 236789999999999999999999999875
No 268
>KOG0690|consensus
Probab=100.00 E-value=4.6e-42 Score=278.77 Aligned_cols=262 Identities=27% Similarity=0.421 Sum_probs=222.4
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCC-CCchhHHHHHHHHhhcCCCCceeeceeEEeCc
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDE-GIPATAIREISVLKELNHPNIVQLHDTMIENY 86 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 86 (313)
.-+..+++|..++.||+|.||.|-+++.+.+++.||+|++++.---. +-...-+.|-.+|+..+||.+..+...|...+
T Consensus 162 ~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~d 241 (516)
T KOG0690|consen 162 KNKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQD 241 (516)
T ss_pred cceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCc
Confidence 34568999999999999999999999999999999999998764221 11345567889999999999999999999999
Q ss_pred EEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 87 RLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 87 ~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
++++||||++| .|.-.++ ....+++...+-.-..|++||.|||+++||++|+|.+|.|++.+|. +||+|||+++.
T Consensus 242 rlCFVMeyanGGeLf~HLs---rer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGH-IKitDFGLCKE 317 (516)
T KOG0690|consen 242 RLCFVMEYANGGELFFHLS---RERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGH-IKITDFGLCKE 317 (516)
T ss_pred eEEEEEEEccCceEeeehh---hhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCc-eEeeecccchh
Confidence 99999999987 4443333 3556899999999999999999999999999999999999999998 99999999976
Q ss_pred cCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCC
Q psy6391 166 FGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 245 (313)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
.=.........+||+.|+|||++.... ++.+.|.|.+|++||+|++|..||...+....+..+......
T Consensus 318 ~I~~g~t~kTFCGTPEYLAPEVleDnD-YgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~k---------- 386 (516)
T KOG0690|consen 318 EIKYGDTTKTFCGTPEYLAPEVLEDND-YGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLK---------- 386 (516)
T ss_pred cccccceeccccCChhhcCchhhcccc-ccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhcc----------
Confidence 432334446679999999999997654 899999999999999999999999998888777777652211
Q ss_pred CCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCC-----CHHHHhcCCCCCCC
Q psy6391 246 KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK 303 (313)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~e~l~h~~~~~~ 303 (313)
+| ..+++++..|+..+|..||.+|. .+.|+.+|+||.+.
T Consensus 387 --------FP-----------r~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v 430 (516)
T KOG0690|consen 387 --------FP-----------RTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASV 430 (516)
T ss_pred --------CC-----------ccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence 11 35899999999999999999998 79999999999873
No 269
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.1e-40 Score=282.02 Aligned_cols=254 Identities=24% Similarity=0.368 Sum_probs=205.1
Q ss_pred hhccceeeeeeccccceEEEEEEeC-----cCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNK-----VTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENY 86 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 86 (313)
..++|.+.+.||+|++|.||+|.+. .++..+++|.+...... .....+.+|+++++.++|+||+++++++....
T Consensus 3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASN-DARKDFEREAELLTNFQHENIVKFYGVCTEGD 81 (280)
T ss_pred ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCH-HHHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence 3578999999999999999999874 33578999998754332 12467889999999999999999999999999
Q ss_pred EEEEEEecccc-CHHHHHhhCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCe
Q psy6391 87 RLYLIFEFMSM-DLKKYIDTVP-----------KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNI 154 (313)
Q Consensus 87 ~~~lv~e~~~~-~l~~~~~~~~-----------~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~ 154 (313)
..+++|||+.+ +|.+.+.... ....+++..+..++.||+.++.+||++|++|+||+|+||+++.++.
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~- 160 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLV- 160 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCe-
Confidence 99999999975 8888876532 2345789999999999999999999999999999999999998876
Q ss_pred EEEecCCCccccCCCC--cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q psy6391 155 VKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFR 231 (313)
Q Consensus 155 ~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~ 231 (313)
++|+|||.+....... .......++..|+|||.+.+.. ++.++||||||+++|+|++ |..||...........+..
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~ 239 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRK-FTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQ 239 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCC-cchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence 9999999987543221 1112233467899999987644 8899999999999999998 9999987777666555543
Q ss_pred hcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 232 VLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
....... ..++..+.+++.+||+.||++||++.|+++
T Consensus 240 ~~~~~~~----------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 240 GRLLQRP----------------------------RTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred CCcCCCC----------------------------CCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 2111110 247799999999999999999999999985
No 270
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3.2e-40 Score=280.57 Aligned_cols=256 Identities=23% Similarity=0.341 Sum_probs=201.8
Q ss_pred hhhccceeeeeeccccceEEEEEEeC-----cCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNK-----VTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN 85 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 85 (313)
..-++|++.+.||+|++|.||.+.+. .++..+++|++...... .....+.+|+.+++.++|+||+++++++..+
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~-~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASM-RERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 35678999999999999999999864 23567999988543221 1235678999999999999999999999999
Q ss_pred cEEEEEEecccc-CHHHHHhhCCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEE
Q psy6391 86 YRLYLIFEFMSM-DLKKYIDTVPK-------GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKV 157 (313)
Q Consensus 86 ~~~~lv~e~~~~-~l~~~~~~~~~-------~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l 157 (313)
...++||||+++ +|.+++..... ...++...+..++.|++.+|.|||+.|++|+||||+||+++.++. ++|
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~-~~l 160 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT-VKI 160 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCC-EEE
Confidence 999999999985 88888765322 123577889999999999999999999999999999999998876 999
Q ss_pred ecCCCccccCCCCcc--cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcC
Q psy6391 158 ADFGLARAFGVPVRI--YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLT 234 (313)
Q Consensus 158 ~df~~~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~ 234 (313)
+|||++......... .....++..|+|||.+.+. .++.++|+||||+++|++++ |..||.................
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~ 239 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG-VFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGL 239 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcC-CcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc
Confidence 999998654322111 1122346779999998654 48999999999999999999 7899987776655554433211
Q ss_pred CCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 235 TPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
.... ..++..+.+++.+||+.||++|||+.|++++
T Consensus 240 ~~~~----------------------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 240 LDKP----------------------------DNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred CCCC----------------------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1100 2467899999999999999999999999864
No 271
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.7e-40 Score=310.29 Aligned_cols=256 Identities=27% Similarity=0.372 Sum_probs=201.4
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
+++|++.+.||+|++|.||+|.+..+++.||+|++...... ......+.+|+.+++.++||||+++++++.+++..+++
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence 57899999999999999999999989999999999754322 22345688999999999999999999999999999999
Q ss_pred Eecccc-CHHHHHhhCCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCC
Q psy6391 92 FEFMSM-DLKKYIDTVPK--------GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGL 162 (313)
Q Consensus 92 ~e~~~~-~l~~~~~~~~~--------~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~ 162 (313)
|||++| +|.+++..... ...++...+..++.||+.||.|||+.|++|+||||+||+++.++. ++|+|||+
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~-vKLiDFGL 159 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGE-VVILDWGA 159 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCC-EEEEecCc
Confidence 999986 88888764321 123556778899999999999999999999999999999998877 99999999
Q ss_pred ccccCCC------------------CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHH
Q psy6391 163 ARAFGVP------------------VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEID 224 (313)
Q Consensus 163 ~~~~~~~------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~ 224 (313)
+...... .......+||..|+|||.+.+.. .+.++||||+|+++|+|++|..||.......
T Consensus 160 Ak~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~-~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 160 AIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVP-ASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred ceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCC-CCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 8765111 01112246899999999987644 7999999999999999999999998754433
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 225 QLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
..... ....+. .. .....+++.+.+++.+||+.||++||+..+.+.
T Consensus 239 i~~~~--~i~~P~--~~----------------------~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl 284 (932)
T PRK13184 239 ISYRD--VILSPI--EV----------------------APYREIPPFLSQIAMKALAVDPAERYSSVQELK 284 (932)
T ss_pred hhhhh--hccChh--hc----------------------cccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 22211 000000 00 001257899999999999999999987665553
No 272
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5.6e-40 Score=276.52 Aligned_cols=251 Identities=25% Similarity=0.417 Sum_probs=202.1
Q ss_pred hhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEE
Q psy6391 10 KSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLY 89 (313)
Q Consensus 10 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 89 (313)
...-++|+++++||+|++|.||+|... +++.+++|.+...... ...+.+|+.++++++|+|++++++++.+ +..+
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 76 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRLVRLYAVVTQ-EPIY 76 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCeeeEEEEEcc-CCcE
Confidence 345678999999999999999999866 5678999998754432 3678899999999999999999998754 5689
Q ss_pred EEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCC
Q psy6391 90 LIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGV 168 (313)
Q Consensus 90 lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~ 168 (313)
+++|++.+ +|.+.+... .+..+++.++..++.|++.+|++||+.|++|+||+|+||+++.++. ++|+|||.+.....
T Consensus 77 ~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~-~~l~dfg~~~~~~~ 154 (260)
T cd05067 77 IITEYMENGSLVDFLKTP-EGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLC-CKIADFGLARLIED 154 (260)
T ss_pred EEEEcCCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCC-EEEccCcceeecCC
Confidence 99999974 888877653 2345899999999999999999999999999999999999998876 99999999876542
Q ss_pred C-CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 169 P-VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 169 ~-~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
. ........++..|+|||.+... ..+.++|+||+|+++|++++ |+.||...........+......+..
T Consensus 155 ~~~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------- 225 (260)
T cd05067 155 NEYTAREGAKFPIKWTAPEAINYG-TFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRP-------- 225 (260)
T ss_pred CCcccccCCcccccccCHHHhccC-CcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCC--------
Confidence 2 1111223446679999988654 47899999999999999998 99999877766555544332111100
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...+.++.+++.+||+.+|++||+++++++
T Consensus 226 --------------------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 226 --------------------DNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred --------------------CCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 236789999999999999999999999875
No 273
>KOG1989|consensus
Probab=100.00 E-value=1.6e-41 Score=307.82 Aligned_cols=262 Identities=26% Similarity=0.414 Sum_probs=209.1
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcC-CCCceeece-eEEe----
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELN-HPNIVQLHD-TMIE---- 84 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~-~~~~---- 84 (313)
.---+++|.+.|.+|||+.||.|.+...+..||+|++-.. ++.....+.+|+.+++.|+ |+|||.+++ ....
T Consensus 34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~ 111 (738)
T KOG1989|consen 34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSN 111 (738)
T ss_pred ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCC
Confidence 3344678899999999999999999877799999988765 3444678889999999995 999999999 3321
Q ss_pred --CcEEEEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceeccCCCCCEEEecCCCeEEEec
Q psy6391 85 --NYRLYLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRR--VLHRDLKPQNLLIDAKSNIVKVAD 159 (313)
Q Consensus 85 --~~~~~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~--i~H~di~~~Nil~~~~~~~~~l~d 159 (313)
.-.+.|.||||. |+|.++++.....+ |++.++.+|+.|+++|+.+||..+ |+|||||-+|||++.++. .||||
T Consensus 112 ~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~-~KLCD 189 (738)
T KOG1989|consen 112 NGVWEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGN-YKLCD 189 (738)
T ss_pred CceeEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCC-EEeCc
Confidence 135789999999 59999998765555 999999999999999999999987 999999999999999987 89999
Q ss_pred CCCccccCCCCccc---------ccccccccccchhhhc--CCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy6391 160 FGLARAFGVPVRIY---------THEVVTLWYRAPEVLL--GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFR 228 (313)
Q Consensus 160 f~~~~~~~~~~~~~---------~~~~~~~~~~~PE~~~--~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~ 228 (313)
||.++-.-...... -....|+.|.|||++. .+...+.++|||||||+||.|+....||.......++.-
T Consensus 190 FGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng 269 (738)
T KOG1989|consen 190 FGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNG 269 (738)
T ss_pred ccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEec
Confidence 99986542221100 0113389999999984 334689999999999999999999999997644333222
Q ss_pred HHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCC
Q psy6391 229 IFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP 307 (313)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~ 307 (313)
... +|.+ +.++..+.+||+.||++||.+||++.+++.+-+--.+...|
T Consensus 270 ~Y~----------------------~P~~---------p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~ 317 (738)
T KOG1989|consen 270 NYS----------------------FPPF---------PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCP 317 (738)
T ss_pred ccc----------------------CCCC---------ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCC
Confidence 111 1111 45889999999999999999999999999876665554444
No 274
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=5.3e-40 Score=276.48 Aligned_cols=247 Identities=29% Similarity=0.439 Sum_probs=205.3
Q ss_pred eeeccccceEEEEEEeCcC---CcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEeccc
Q psy6391 20 EKIGEGTYGVVYKAKNKVT---GALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMS 96 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~---~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 96 (313)
+.||+|++|.||++.+... +..+++|.+....... ....+.+|+.+++.++|++++++++++......+++|||+.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence 4689999999999999865 8899999997665433 35788899999999999999999999999999999999995
Q ss_pred -cCHHHHHhhCCC------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 97 -MDLKKYIDTVPK------GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 97 -~~l~~~~~~~~~------~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
++|.+.+..... ...+++..++.++.|++.||.+||++|++|+||+|+||+++.++. ++|+|||.+......
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~-~~l~dfg~~~~~~~~ 158 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLV-VKISDFGLSRDVYDD 158 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCc-EEEcccccccccccc
Confidence 588888876421 356899999999999999999999999999999999999999877 999999999876543
Q ss_pred C--cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 170 V--RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 170 ~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
. .......++..|+|||.+... .++.++|+||||+++|++++ |..||...........+........
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------- 228 (262)
T cd00192 159 DYYRKKTGGKLPIRWMAPESLKDG-IFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPK--------- 228 (262)
T ss_pred cccccccCCCcCccccCHHHhccC-CcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC---------
Confidence 2 222334567889999988765 48999999999999999999 6999998877666655543111110
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
+ ..++.++.+++.+||+.+|.+|||+.+++++
T Consensus 229 --------~-----------~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 229 --------P-----------EYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred --------C-----------ccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 0 2468999999999999999999999999875
No 275
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=5.9e-40 Score=277.30 Aligned_cols=252 Identities=21% Similarity=0.335 Sum_probs=202.8
Q ss_pred hccceeeeeeccccceEEEEEEeCcC---CcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVT---GALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLY 89 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~---~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 89 (313)
.++|++.+.||+|++|.||+|.+..+ ...+++|.++.... ......+.+|+.+++.++|+||+++++.+...+..+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS-DKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM 81 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC-hHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence 46899999999999999999988643 45799998865432 222356788999999999999999999999999999
Q ss_pred EEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCC
Q psy6391 90 LIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGV 168 (313)
Q Consensus 90 lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~ 168 (313)
++||++.+ +|.+++... .+.+++..+..++.|++.++.+||+.|++|+||+|+||+++.++. ++|+|||++.....
T Consensus 82 iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~-~~l~dfg~~~~~~~ 158 (266)
T cd05033 82 IITEYMENGSLDKFLREN--DGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLV-CKVSDFGLSRRLED 158 (266)
T ss_pred EEEEcCCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCC-EEECccchhhcccc
Confidence 99999975 888887652 235899999999999999999999999999999999999998876 99999999987642
Q ss_pred CCcccc--cccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCC
Q psy6391 169 PVRIYT--HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 245 (313)
Q Consensus 169 ~~~~~~--~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
...... ...++..|+|||.+... .++.++|+||||+++|++++ |..||...........+......+..
T Consensus 159 ~~~~~~~~~~~~~~~y~~Pe~~~~~-~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~------- 230 (266)
T cd05033 159 SEATYTTKGGKIPIRWTAPEAIAYR-KFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPP------- 230 (266)
T ss_pred cccceeccCCCCCccccChhhhccC-CCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCC-------
Confidence 222111 12335679999988654 48899999999999999998 99999876665555544332111110
Q ss_pred CCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 246 KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
...++.+.+++.+|++.+|++||++.+++++
T Consensus 231 ---------------------~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 231 ---------------------MDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred ---------------------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1367899999999999999999999999864
No 276
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.6e-40 Score=280.48 Aligned_cols=255 Identities=23% Similarity=0.374 Sum_probs=202.4
Q ss_pred hhccceeeeeeccccceEEEEEEe----CcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKN----KVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYR 87 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~----~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 87 (313)
.+++|++.+.||+|+||.||+|.. ..++..+++|.+...... .....+.+|+.+++.++||||+++++++..+..
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 81 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNP-QQWGEFQQEASLMAELHHPNIVCLLGVVTQEQP 81 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCH-HHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCc
Confidence 367899999999999999999985 345678999998753322 123567889999999999999999999999999
Q ss_pred EEEEEecccc-CHHHHHhhCCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCC
Q psy6391 88 LYLIFEFMSM-DLKKYIDTVPK--------------GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKS 152 (313)
Q Consensus 88 ~~lv~e~~~~-~l~~~~~~~~~--------------~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~ 152 (313)
.+++|||+.+ +|.+++..... ...+++.++..++.|++.||.|||++|++|+||+|+||+++.++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQL 161 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCC
Confidence 9999999985 88877743211 23478889999999999999999999999999999999999887
Q ss_pred CeEEEecCCCccccCCCC--cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy6391 153 NIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRI 229 (313)
Q Consensus 153 ~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~ 229 (313)
. ++|+|||++....... .......++..|+|||.+.+. ..+.++|+||||+++|+|++ |..||...........+
T Consensus 162 ~-~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~ 239 (283)
T cd05090 162 H-VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYG-KFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMV 239 (283)
T ss_pred c-EEeccccccccccCCcceecccCCCccceecChHHhccC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 6 9999999997653221 111223346679999988654 47999999999999999998 99999877665555444
Q ss_pred HHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 230 FRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
......+.. ..+++.+.+++.+||+.||.+||++.+++++
T Consensus 240 ~~~~~~~~~----------------------------~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 240 RKRQLLPCS----------------------------EDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HcCCcCCCC----------------------------CCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 332111110 2367899999999999999999999999764
No 277
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.9e-39 Score=273.92 Aligned_cols=254 Identities=27% Similarity=0.458 Sum_probs=204.6
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC---CCCchhHHHHHHHHhhcCCCCceeeceeEEeC--cEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD---EGIPATAIREISVLKELNHPNIVQLHDTMIEN--YRL 88 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~ 88 (313)
.+|++.+.||+|++|.||++.+..+++.+++|.+...... ......+.+|+.++++++|++|+++++++.+. ..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4799999999999999999999989999999987543221 22235778899999999999999999998764 568
Q ss_pred EEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 89 YLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 89 ~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
++++||+++ +|.+.+.. .+.+++..+..++.||+.+|.+||+.|++|+||+|+||+++.++. ++|+|||.+....
T Consensus 82 ~~v~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~-~~l~dfg~~~~~~ 157 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKA---YGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGN-VKLGDFGASKRIQ 157 (264)
T ss_pred EEEEEeCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCC-EEECccccccccc
Confidence 899999975 78777764 234889999999999999999999999999999999999998876 9999999987653
Q ss_pred CCC---cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCC
Q psy6391 168 VPV---RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 244 (313)
Q Consensus 168 ~~~---~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
... .......++..|+|||.+.+.. .+.++|+||||+++|++++|+.||..........+... .+.....+
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~p-- 231 (264)
T cd06653 158 TICMSGTGIKSVTGTPYWMSPEVISGEG-YGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIAT---QPTKPMLP-- 231 (264)
T ss_pred cccccCccccccCCcccccCHhhhcCCC-CCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHc---CCCCCCCC--
Confidence 211 1112345788899999887644 78999999999999999999999987765554444332 11111111
Q ss_pred CCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 245 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
..+++++.++|.+|++ +|.+||++.++++|||.
T Consensus 232 ----------------------~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 232 ----------------------DGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred ----------------------cccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 2478999999999999 57999999999999984
No 278
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=8.1e-40 Score=278.22 Aligned_cols=249 Identities=25% Similarity=0.384 Sum_probs=195.4
Q ss_pred eeccccceEEEEEEeCcCCcEEEEEEecccCCCCCC-chhHHHHHH---HHhhcCCCCceeeceeEEeCcEEEEEEeccc
Q psy6391 21 KIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGI-PATAIREIS---VLKELNHPNIVQLHDTMIENYRLYLIFEFMS 96 (313)
Q Consensus 21 ~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~-~~~~~~e~~---~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 96 (313)
.||+|++|.||++.+..+++.||+|.+......... .....+|.. .++...||+++.+++++.+.+..++|+||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 479999999999999888999999998765422211 122334433 3444579999999999999999999999998
Q ss_pred c-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccccc
Q psy6391 97 M-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTH 175 (313)
Q Consensus 97 ~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~ 175 (313)
| +|...+.. .+.+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++. ++|+|||.+........ ..
T Consensus 81 g~~L~~~l~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~-~kl~dfg~~~~~~~~~~--~~ 154 (278)
T cd05606 81 GGDLHYHLSQ---HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKP--HA 154 (278)
T ss_pred CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCC-EEEccCcCccccCccCC--cC
Confidence 6 67666653 346899999999999999999999999999999999999998876 99999999875533222 33
Q ss_pred ccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHhcCCCCCCCCCCCCCCCCcccc
Q psy6391 176 EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQ--LFRIFRVLTTPTEDNWPGVSKLPDYKTT 253 (313)
Q Consensus 176 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (313)
..|+..|+|||.+.+...++.++|+||+|+++|+|++|..||........ ........... +
T Consensus 155 ~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~------------ 218 (278)
T cd05606 155 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE----L------------ 218 (278)
T ss_pred cCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCC----C------------
Confidence 46889999999987554578999999999999999999999986633221 11111110000 0
Q ss_pred CCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCC-----CHHHHhcCCCCCCC
Q psy6391 254 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK 303 (313)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~e~l~h~~~~~~ 303 (313)
+ ..++.++.+++.+||..+|.+|| ++.++++||||++.
T Consensus 219 -~-----------~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~ 261 (278)
T cd05606 219 -P-----------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSL 261 (278)
T ss_pred -C-----------CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCC
Confidence 0 13679999999999999999999 99999999999885
No 279
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=6.9e-40 Score=276.30 Aligned_cols=250 Identities=26% Similarity=0.388 Sum_probs=200.3
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEE
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYL 90 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 90 (313)
...++|++.+.||+|++|.||+|.+..+ ..+++|.++..... ...+.+|+++++.++|+||+++++.+.. +..++
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~l 77 (262)
T cd05071 3 IPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 77 (262)
T ss_pred CChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccC---HHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEE
Confidence 3457899999999999999999988755 46999998753322 3578899999999999999999998754 46789
Q ss_pred EEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 91 IFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 91 v~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
||||+++ +|.+.+... ....+++..+..++.|++.+|.+||+.|++|+||+|+||+++.++. ++|+|||.+......
T Consensus 78 v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~-~~L~dfg~~~~~~~~ 155 (262)
T cd05071 78 VTEYMSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-CKVADFGLARLIEDN 155 (262)
T ss_pred EEEcCCCCcHHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCc-EEeccCCceeecccc
Confidence 9999985 888887653 2335789999999999999999999999999999999999998876 999999999765433
Q ss_pred Cccc-ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCC
Q psy6391 170 VRIY-THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 247 (313)
Q Consensus 170 ~~~~-~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
.... ....++..|+|||..... .++.++|+||||+++|++++ |..||...........+......+.
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~---------- 224 (262)
T cd05071 156 EYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC---------- 224 (262)
T ss_pred ccccccCCcccceecCHhHhccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCC----------
Confidence 2211 123456679999987654 47999999999999999999 8889987766555544432111100
Q ss_pred CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 248 PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...++..+.+++.+|++.||++||++.++++
T Consensus 225 ------------------~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 225 ------------------PPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred ------------------ccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 0246789999999999999999999999886
No 280
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=4.7e-40 Score=284.56 Aligned_cols=280 Identities=21% Similarity=0.282 Sum_probs=200.6
Q ss_pred cceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc-CHHHHHh
Q psy6391 26 TYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM-DLKKYID 104 (313)
Q Consensus 26 ~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~ 104 (313)
+.+.||.+++..+++.||+|++............+.+|+.+++.++|+||+++++++.+++..+++|||+++ ++.+++.
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~ 91 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK 91 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence 445666666676899999999987644444457889999999999999999999999999999999999985 7777776
Q ss_pred hCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc-------cccccc
Q psy6391 105 TVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR-------IYTHEV 177 (313)
Q Consensus 105 ~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~-------~~~~~~ 177 (313)
... ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++. ++++||+.+........ ......
T Consensus 92 ~~~-~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~-~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (314)
T cd08216 92 THF-PEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGK-VVLSGLRYSVSMIKHGKRQRVVHDFPKSSV 169 (314)
T ss_pred Hhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCc-eEEecCccceeecccccccccccccccccc
Confidence 532 234889999999999999999999999999999999999998877 99999998865422111 112234
Q ss_pred ccccccchhhhcCC-CCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCC--CCCCCCC-CCCCcc--
Q psy6391 178 VTLWYRAPEVLLGS-QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTE--DNWPGVS-KLPDYK-- 251 (313)
Q Consensus 178 ~~~~~~~PE~~~~~-~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~-- 251 (313)
++..|+|||.+... ..++.++|+||+|++++++++|..||..................... ...+... ......
T Consensus 170 ~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
T cd08216 170 KNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSS 249 (314)
T ss_pred ccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCccccc
Confidence 56789999998653 34788999999999999999999999876554443332221111000 0000000 000000
Q ss_pred ccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCCC
Q psy6391 252 TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP 307 (313)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~~ 307 (313)
...+.............++.++.+|+.+||+.||++|||+.++|+||||++-...+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~~~ 305 (314)
T cd08216 250 NEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKRRN 305 (314)
T ss_pred ccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhcccc
Confidence 00000000000011123567899999999999999999999999999999865443
No 281
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=6.2e-40 Score=275.64 Aligned_cols=249 Identities=24% Similarity=0.317 Sum_probs=201.1
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
..+|++.+.||+|++|.||++.++ ++..+++|.+...... ...+.+|+.+++.++|+||+++++++...+..++|+
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVT 78 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEE
Confidence 457899999999999999999886 4668999988643322 356888999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
||+++ +|.+.+.... ..+++..+..++.||+.++.+||+.|++|+||+|+||+++.++. ++|+|||.+........
T Consensus 79 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~-~kl~dfg~~~~~~~~~~ 155 (256)
T cd05059 79 EYMANGCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNV-VKVSDFGLARYVLDDQY 155 (256)
T ss_pred ecCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCc-EEECCcccceecccccc
Confidence 99975 7888776532 35899999999999999999999999999999999999998877 99999999876543211
Q ss_pred c-cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy6391 172 I-YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 249 (313)
Q Consensus 172 ~-~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (313)
. .....++..|+|||.+.+. .++.++|+||+|+++|++++ |..||......+....+......+.+
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~-~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------- 223 (256)
T cd05059 156 TSSQGTKFPVKWAPPEVFDYS-RFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRP----------- 223 (256)
T ss_pred cccCCCCCCccccCHHHhccC-CCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCC-----------
Confidence 1 1111234579999988764 47889999999999999999 89999877766655544332111100
Q ss_pred ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 250 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
...+.++.+++.+||+.+|++|||+.++++.
T Consensus 224 -----------------~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 224 -----------------KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred -----------------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 2368999999999999999999999999864
No 282
>KOG0584|consensus
Probab=100.00 E-value=1.3e-41 Score=297.31 Aligned_cols=252 Identities=25% Similarity=0.422 Sum_probs=212.5
Q ss_pred eeeeeccccceEEEEEEeCcCCcEEEEEEecccCC--CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc--EEEEEEe
Q psy6391 18 KVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND--DEGIPATAIREISVLKELNHPNIVQLHDTMIENY--RLYLIFE 93 (313)
Q Consensus 18 ~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e 93 (313)
....||+|+|-+||+|.+..+|..||--.++.... .....+++..|+.+|+.|+|+||++++.++.+.. .+.+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 44679999999999999999999998776655442 2333478999999999999999999999999765 4889999
Q ss_pred ccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceeccCCCCCEEEecCCCeEEEecCCCccccCCCC
Q psy6391 94 FMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRR--VLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV 170 (313)
Q Consensus 94 ~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~--i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~ 170 (313)
.+. |+|..+..+.. .+....++.|++||+.||.|||++. |+|+|||.+||+++.+.+.+||+|+|+|+......
T Consensus 124 L~TSGtLr~Y~kk~~---~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~ 200 (632)
T KOG0584|consen 124 LFTSGTLREYRKKHR---RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH 200 (632)
T ss_pred cccCCcHHHHHHHhc---cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccc
Confidence 996 68888887654 3788899999999999999999985 99999999999999988889999999999876544
Q ss_pred cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCc
Q psy6391 171 RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY 250 (313)
Q Consensus 171 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (313)
. ....||+.|||||++. ..|....||||||+||++|+|+..||..-....++++.+.....|..
T Consensus 201 a--ksvIGTPEFMAPEmYE--E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~s------------ 264 (632)
T KOG0584|consen 201 A--KSVIGTPEFMAPEMYE--ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAA------------ 264 (632)
T ss_pred c--ceeccCccccChHHHh--hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHH------------
Confidence 3 3468999999999986 35899999999999999999999999988777777766654333221
Q ss_pred cccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 251 KTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
+.+. -.+++.+||.+||.. ..+|||+.|+|.||||...
T Consensus 265 -----------l~kV---~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 265 -----------LSKV---KDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred -----------hhcc---CCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 1110 148999999999999 9999999999999999985
No 283
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=7.1e-40 Score=278.47 Aligned_cols=256 Identities=20% Similarity=0.322 Sum_probs=202.8
Q ss_pred hhccceeeeeeccccceEEEEEEeCc-----CCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKV-----TGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENY 86 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 86 (313)
..++|.+.+.||+|++|.||+|.+.. ++..|++|.+....... ....+.+|+.+++.++|+||+++++++.+.+
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQ-DESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHH-HHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 35789999999999999999999876 67789999886443221 1256888999999999999999999999888
Q ss_pred EEEEEEecccc-CHHHHHhhCCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCC--CeEEEec
Q psy6391 87 RLYLIFEFMSM-DLKKYIDTVPK----GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKS--NIVKVAD 159 (313)
Q Consensus 87 ~~~lv~e~~~~-~l~~~~~~~~~----~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~--~~~~l~d 159 (313)
..+++|||+.+ +|.+++..... ...+++..+..++.||+.++.|||++|++|+||+|+||+++.++ ..++|+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEecc
Confidence 99999999975 88888765321 23588999999999999999999999999999999999998654 3489999
Q ss_pred CCCccccCCCCc--ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCC
Q psy6391 160 FGLARAFGVPVR--IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTP 236 (313)
Q Consensus 160 f~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~ 236 (313)
||++........ .......+..|+|||.+.+.. ++.++||||||+++|+|++ |..||...........+.......
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~ 241 (277)
T cd05036 163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGI-FTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLD 241 (277)
T ss_pred CccccccCCccceecCCCCCccHhhCCHHHHhcCC-cCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCC
Confidence 999876532111 011122345799999986644 8999999999999999997 999998876665544433211110
Q ss_pred CCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 237 TEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
. ...++..+.+++.+|++.||++||++.++++|
T Consensus 242 ~----------------------------~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 242 P----------------------------PKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred C----------------------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0 02478999999999999999999999999976
No 284
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=5.2e-40 Score=275.45 Aligned_cols=244 Identities=25% Similarity=0.407 Sum_probs=194.1
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc-C
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM-D 98 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~-~ 98 (313)
+.||+|++|.||++.+..+++.+++|.+.... .......+.+|+++++.++|+||+++++++...+..++||||+.+ +
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence 46899999999999998889999999876432 222336788999999999999999999999999999999999975 7
Q ss_pred HHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccc--cc
Q psy6391 99 LKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYT--HE 176 (313)
Q Consensus 99 l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~--~~ 176 (313)
|.+++.. ....+++..++.++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||.+........... ..
T Consensus 80 L~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~-~kl~dfg~~~~~~~~~~~~~~~~~ 156 (252)
T cd05084 80 FLTFLRT--EGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNV-LKISDFGMSREEEDGVYASTGGMK 156 (252)
T ss_pred HHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCc-EEECccccCcccccccccccCCCC
Confidence 8777764 2345889999999999999999999999999999999999998876 99999999875432211111 11
Q ss_pred cccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCC
Q psy6391 177 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFP 255 (313)
Q Consensus 177 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (313)
..+..|+|||.+.+.. .+.++|+||||+++|++++ |..||..................+. +
T Consensus 157 ~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-----------------~ 218 (252)
T cd05084 157 QIPVKWTAPEALNYGR-YSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPC-----------------P 218 (252)
T ss_pred CCceeecCchhhcCCC-CChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCC-----------------c
Confidence 2245699999886544 7899999999999999997 8899987665444333322111100 0
Q ss_pred CCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 256 EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 256 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
..++..+.+++.+||+.+|++|||+.++++
T Consensus 219 -----------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 219 -----------ELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred -----------ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 136789999999999999999999999974
No 285
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=8.1e-40 Score=279.67 Aligned_cols=253 Identities=25% Similarity=0.392 Sum_probs=202.7
Q ss_pred hhccceeeeeeccccceEEEEEEe-----CcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKN-----KVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENY 86 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~-----~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 86 (313)
...+|.+.+.||+|++|.||.+.. ..++..+++|.+..... .....+.+|+.+++.++|++++++++++...+
T Consensus 3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD--NARKDFHREAELLTNLQHEHIVKFYGVCVEGD 80 (288)
T ss_pred chHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCH--HHHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 456899999999999999999985 23456689998864321 22356889999999999999999999999999
Q ss_pred EEEEEEecccc-CHHHHHhhCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeE
Q psy6391 87 RLYLIFEFMSM-DLKKYIDTVP----------KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIV 155 (313)
Q Consensus 87 ~~~lv~e~~~~-~l~~~~~~~~----------~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~ 155 (313)
..++++||+.+ +|.+++.... ....+++..+..++.||+.||.|||++|++|+||||+||+++.++. +
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~-~ 159 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL-V 159 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc-E
Confidence 99999999974 8888776432 1234899999999999999999999999999999999999998876 9
Q ss_pred EEecCCCccccCCCC--cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHh
Q psy6391 156 KVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRV 232 (313)
Q Consensus 156 ~l~df~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~ 232 (313)
+|+|||.+....... .......++..|+|||.+.+. .++.++|+||||+++|+|++ |..||...........+...
T Consensus 160 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~ 238 (288)
T cd05093 160 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR-KFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG 238 (288)
T ss_pred EeccCCccccccCCceeecCCCCCccccccCHHHhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 999999987653221 111223446789999988654 48899999999999999998 99999887766655555432
Q ss_pred cCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 233 LTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
..... ...++.++.+|+.+||+.||.+|||+.++++
T Consensus 239 ~~~~~----------------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 239 RVLQR----------------------------PRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred CcCCC----------------------------CCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 11110 0136789999999999999999999999854
No 286
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=8e-40 Score=273.83 Aligned_cols=245 Identities=30% Similarity=0.488 Sum_probs=204.0
Q ss_pred eccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEeccc-cCH
Q psy6391 22 IGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMS-MDL 99 (313)
Q Consensus 22 lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~-~~l 99 (313)
||.|++|.||.+.+..+++.+++|++...... ......+.+|+.+++.++|++++++++.+..++..+++||++. ++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 68999999999999888999999998765432 2234578889999999999999999999999999999999995 588
Q ss_pred HHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccccccccc
Q psy6391 100 KKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHEVVT 179 (313)
Q Consensus 100 ~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 179 (313)
.+.+... ..+++..+..++.|++.++.+||+.+++|+||+|+||+++.++. ++|+|||.+..............++
T Consensus 81 ~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~-~~l~d~~~~~~~~~~~~~~~~~~~~ 156 (250)
T cd05123 81 FSHLSKE---GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGH-IKLTDFGLAKELSSEGSRTNTFCGT 156 (250)
T ss_pred HHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCc-EEEeecCcceecccCCCcccCCcCC
Confidence 8877653 35899999999999999999999999999999999999998876 9999999987765432233445678
Q ss_pred ccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCch
Q psy6391 180 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN 259 (313)
Q Consensus 180 ~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (313)
..|+|||.+.+.. .+.++|+||||+++|++++|..||...........+... ..+. +
T Consensus 157 ~~~~~Pe~~~~~~-~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~-----------------~---- 213 (250)
T cd05123 157 PEYLAPEVLLGKG-YGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKD-PLRF-----------------P---- 213 (250)
T ss_pred ccccChHHhCCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC-CCCC-----------------C----
Confidence 8899999886544 788999999999999999999999877664444444321 0000 0
Q ss_pred hhhhhhccCCCHHHHHHHHHHhccCCCCCCCH---HHHhcCCCC
Q psy6391 260 FCLDKHVKNLDQDGLDLLEKTLIYCPATRINA---ENALKHKYF 300 (313)
Q Consensus 260 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~---~e~l~h~~~ 300 (313)
..+++.+.+++++||..||++||++ .++++||||
T Consensus 214 -------~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 214 -------EFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred -------CCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 1357999999999999999999999 999999998
No 287
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.2e-40 Score=278.83 Aligned_cols=248 Identities=30% Similarity=0.484 Sum_probs=197.0
Q ss_pred eeeeeeccccceEEEEEEeC----cCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 17 EKVEKIGEGTYGVVYKAKNK----VTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 17 ~~~~~lg~g~~~~v~~~~~~----~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
.+.+.||.|.||.||+|.+. ..+..|++|.++... .......+.+|++.++.++||||+++++++...+..++|+
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSS-SEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTS-SHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccc-ccccceeeeecccccccccccccccccccccccccccccc
Confidence 46789999999999999987 446789999995432 2222478899999999999999999999999888899999
Q ss_pred eccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC--
Q psy6391 93 EFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP-- 169 (313)
Q Consensus 93 e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~-- 169 (313)
||+. |+|.+.+... ....+++..+..++.||+.||.|||+++++|++|+++||+++.++. +||+|||++......
T Consensus 81 e~~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~-~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQ-VKLSDFGLSRPISEKSK 158 (259)
T ss_dssp E--TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTE-EEEESTTTGEETTTSSS
T ss_pred ccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccc
Confidence 9998 5899988875 2345899999999999999999999999999999999999999875 999999999876221
Q ss_pred CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy6391 170 VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 248 (313)
Q Consensus 170 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
............|+|||.+.... ++.++||||||+++|++++ |+.||...........+......+.+
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~-~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---------- 227 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGE-YTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIP---------- 227 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSE-ESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSB----------
T ss_pred ccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccceec----------
Confidence 12223345677899999987644 8999999999999999999 78999988777766666443222211
Q ss_pred CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 249 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
..++..+.++|..||+.||.+||++.++++
T Consensus 228 ------------------~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 228 ------------------DNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp ------------------TTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ------------------cchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 246899999999999999999999999974
No 288
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.2e-39 Score=274.56 Aligned_cols=250 Identities=24% Similarity=0.389 Sum_probs=200.9
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEE
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYL 90 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 90 (313)
...++|++.+.||+|++|.||++... ++..+++|.+...... ...+.+|+.+++.++|++++++++++.. ...++
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~l 77 (260)
T cd05070 3 IPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYI 77 (260)
T ss_pred CchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEE
Confidence 45678999999999999999999876 5567999998754432 3678899999999999999999998754 56789
Q ss_pred EEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 91 IFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 91 v~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
+|||+.+ +|.+.+... ....+++..+..++.|++.+|.|||+.|++|+||+|+||+++.++. ++|+|||.+......
T Consensus 78 v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~-~~l~dfg~~~~~~~~ 155 (260)
T cd05070 78 VTEYMSKGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLV-CKIADFGLARLIEDN 155 (260)
T ss_pred EEEecCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCce-EEeCCceeeeeccCc
Confidence 9999975 888877653 2345899999999999999999999999999999999999998765 999999999765432
Q ss_pred Cc-ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCC
Q psy6391 170 VR-IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 247 (313)
Q Consensus 170 ~~-~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
.. ......++..|+|||.+... .++.++|+||||+++|++++ |..||...+..+....+......+..
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------- 225 (260)
T cd05070 156 EYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCP--------- 225 (260)
T ss_pred ccccccCCCCCccccChHHHhcC-CCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC---------
Confidence 21 11222345679999987654 48899999999999999999 89999887766655554432111100
Q ss_pred CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 248 PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...+.++.+++.+|+..+|.+|||+.++++
T Consensus 226 -------------------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 226 -------------------QDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred -------------------CcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 236789999999999999999999999874
No 289
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.9e-39 Score=273.34 Aligned_cols=252 Identities=25% Similarity=0.388 Sum_probs=205.6
Q ss_pred hhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEE
Q psy6391 10 KSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLY 89 (313)
Q Consensus 10 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 89 (313)
+...++|.+.+.||+|++|.||++.+. ++..+++|.+...... ...+.+|+.+++.++|++++++++++......+
T Consensus 2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05034 2 EIPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMS---PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIY 77 (261)
T ss_pred ccchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccC---HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceE
Confidence 345689999999999999999999976 4577999998754432 367889999999999999999999999989999
Q ss_pred EEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCC
Q psy6391 90 LIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGV 168 (313)
Q Consensus 90 lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~ 168 (313)
++||++.+ +|.+.+... ....++...+..++.+++.|+.+||++|++|+||+|+||+++.++. ++|+|||.+.....
T Consensus 78 ~v~e~~~~~~L~~~i~~~-~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~-~~l~d~g~~~~~~~ 155 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSG-EGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLV-CKIADFGLARLIED 155 (261)
T ss_pred EEEeccCCCCHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCC-EEECccccceeccc
Confidence 99999975 888877653 2345899999999999999999999999999999999999998877 99999999876543
Q ss_pred CCc-ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 169 PVR-IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 169 ~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
... ......++..|+|||.+.+. ..+.++|+||+|+++|++++ |+.||...........+......+..
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~-------- 226 (261)
T cd05034 156 DEYTAREGAKFPIKWTAPEAANYG-RFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRP-------- 226 (261)
T ss_pred hhhhhhhccCCCccccCHHHhccC-CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC--------
Confidence 211 11122234679999988754 48899999999999999998 99999887776666665442211111
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...+.++.+++.+||+.+|.+||++.++++
T Consensus 227 --------------------~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 227 --------------------PNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred --------------------CCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 135789999999999999999999999874
No 290
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=8.6e-40 Score=277.87 Aligned_cols=256 Identities=24% Similarity=0.346 Sum_probs=204.2
Q ss_pred hhhhccceeeeeeccccceEEEEEEeCcC-----CcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEe
Q psy6391 10 KSRLEDYEKVEKIGEGTYGVVYKAKNKVT-----GALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIE 84 (313)
Q Consensus 10 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~-----~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 84 (313)
+...++|++.+.||+|++|.||.+.+... +..+++|.+...... .....+.+|+.+++.++|+||+++++++..
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 80 (277)
T cd05032 2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASM-RERIEFLNEASVMKEFNCHHVVRLLGVVST 80 (277)
T ss_pred ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCH-HHHHHHHHHHHHHHhCCCCceeEEEEEEcC
Confidence 34568999999999999999999987643 478999998644321 123567889999999999999999999999
Q ss_pred CcEEEEEEeccc-cCHHHHHhhCCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEE
Q psy6391 85 NYRLYLIFEFMS-MDLKKYIDTVPK-------GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVK 156 (313)
Q Consensus 85 ~~~~~lv~e~~~-~~l~~~~~~~~~-------~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~ 156 (313)
....++||||++ ++|.+.+..... ...+++..+..++.||+.||.|||+.|++|+||+|+||+++.++. ++
T Consensus 81 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~-~k 159 (277)
T cd05032 81 GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLT-VK 159 (277)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCC-EE
Confidence 999999999997 588888765322 234688899999999999999999999999999999999999877 99
Q ss_pred EecCCCccccCCCCc--ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhc
Q psy6391 157 VADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVL 233 (313)
Q Consensus 157 l~df~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~ 233 (313)
|+|||++........ ......++..|+|||.+... ..+.++|+||||+++|++++ |..||................
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~ 238 (277)
T cd05032 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG-VFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGG 238 (277)
T ss_pred ECCcccchhhccCcccccCCCCCccccccCHHHHhcC-CCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCC
Confidence 999999876533211 11223456789999988654 48899999999999999998 999998777665554443211
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 234 TTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
..+. + ..++.++.+++.+||+.+|++|||+.++++
T Consensus 239 ~~~~-----------------~-----------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 239 HLDL-----------------P-----------ENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred CCCC-----------------C-----------CCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 1100 0 135789999999999999999999999986
No 291
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=6.1e-40 Score=281.09 Aligned_cols=259 Identities=23% Similarity=0.377 Sum_probs=206.0
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcC-----CcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeecee
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVT-----GALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDT 81 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~-----~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~ 81 (313)
++....++|++.+.||+|++|.||++.+... ...+++|.+....... ....+.+|+.+++.+ +|+||++++++
T Consensus 6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~ 84 (293)
T cd05053 6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGKHKNIINLLGV 84 (293)
T ss_pred ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHH-HHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence 4566678999999999999999999987533 3679999887543222 235678899999999 89999999999
Q ss_pred EEeCcEEEEEEecccc-CHHHHHhhC-------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEE
Q psy6391 82 MIENYRLYLIFEFMSM-DLKKYIDTV-------------PKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLL 147 (313)
Q Consensus 82 ~~~~~~~~lv~e~~~~-~l~~~~~~~-------------~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil 147 (313)
+..++..+++|||+.+ +|..++... .....+++..+..++.||+.||+|||+.|++|+||+|+||+
T Consensus 85 ~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil 164 (293)
T cd05053 85 CTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVL 164 (293)
T ss_pred EcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEE
Confidence 9999999999999975 888887642 23456899999999999999999999999999999999999
Q ss_pred EecCCCeEEEecCCCccccCCCCcc--cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHH
Q psy6391 148 IDAKSNIVKVADFGLARAFGVPVRI--YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEID 224 (313)
Q Consensus 148 ~~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~ 224 (313)
++.++. ++|+|||.+......... .....++..|+|||.+.+. .++.++||||+|+++|++++ |..||......+
T Consensus 165 ~~~~~~-~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 242 (293)
T cd05053 165 VTEDHV-MKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242 (293)
T ss_pred EcCCCe-EEeCccccccccccccceeccCCCCCCccccCHHHhccC-CcCcccceeehhhHHHHHhcCCCCCCCCCCHHH
Confidence 998876 999999999765432111 1112234679999987654 47899999999999999997 999998776666
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 225 QLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
............. ...++.++.+|+.+||..||++|||+.+++++
T Consensus 243 ~~~~~~~~~~~~~----------------------------~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 243 LFKLLKEGYRMEK----------------------------PQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHHHHcCCcCCC----------------------------CCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 5554433211100 02367899999999999999999999999874
No 292
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.1e-39 Score=274.25 Aligned_cols=242 Identities=23% Similarity=0.385 Sum_probs=193.7
Q ss_pred eeccccceEEEEEEe--CcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc-
Q psy6391 21 KIGEGTYGVVYKAKN--KVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM- 97 (313)
Q Consensus 21 ~lg~g~~~~v~~~~~--~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~- 97 (313)
+||+|++|.||+|.+ ..++..+++|+++...........+.+|+.+++.++|+||+++++++.. +..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 689999999999964 4567889999987554444445678899999999999999999998864 467899999985
Q ss_pred CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccc---c
Q psy6391 98 DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIY---T 174 (313)
Q Consensus 98 ~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~---~ 174 (313)
+|.+.+.. ...+++..+..++.|++.+|.+||++|++|+||+|+||+++.++. ++|+|||.+.......... .
T Consensus 81 ~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~-~kl~Dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05116 81 PLNKFLQK---NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHY-AKISDFGLSKALGADENYYKAKT 156 (257)
T ss_pred cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCe-EEECCCccccccCCCCCeeeecC
Confidence 78777764 335899999999999999999999999999999999999998766 9999999997664432211 1
Q ss_pred cccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcccc
Q psy6391 175 HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT 253 (313)
Q Consensus 175 ~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (313)
...++..|+|||.+.. ...+.++|+||||+++|++++ |..||...........+......+.+
T Consensus 157 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~--------------- 220 (257)
T cd05116 157 HGKWPVKWYAPECMNY-YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECP--------------- 220 (257)
T ss_pred CCCCCccccCHhHhcc-CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCC---------------
Confidence 1223468999998864 347889999999999999998 99999887766555554432111110
Q ss_pred CCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 254 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
..+++++.++|.+||+.||.+||++++|..
T Consensus 221 -------------~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 221 -------------QRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred -------------CCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 247899999999999999999999999864
No 293
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.3e-40 Score=279.62 Aligned_cols=254 Identities=24% Similarity=0.337 Sum_probs=203.1
Q ss_pred hhccceeeeeeccccceEEEEEEeCc-----CCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKV-----TGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENY 86 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 86 (313)
.+.+|.+.+.||+|++|.||+|.+.. ++..+++|++..... ......+.+|+.++..++||||+++++++...+
T Consensus 3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~ 81 (283)
T cd05091 3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE-GPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ 81 (283)
T ss_pred CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC
Confidence 46789999999999999999998753 357899999875432 222356788999999999999999999999999
Q ss_pred EEEEEEecccc-CHHHHHhhCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCC
Q psy6391 87 RLYLIFEFMSM-DLKKYIDTVP-------------KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKS 152 (313)
Q Consensus 87 ~~~lv~e~~~~-~l~~~~~~~~-------------~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~ 152 (313)
..++++||+.+ +|.+.+.... ....++...+..++.|++.||.|||+.|++|+||||+||+++.++
T Consensus 82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKL 161 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCC
Confidence 99999999975 7777764211 123478888999999999999999999999999999999999877
Q ss_pred CeEEEecCCCccccCCCCc--ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy6391 153 NIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRI 229 (313)
Q Consensus 153 ~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~ 229 (313)
. ++|+|||++........ ......++..|+|||.+.... ++.++|+||||+++|+|++ |..||......+....+
T Consensus 162 ~-~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05091 162 N-VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGK-FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI 239 (283)
T ss_pred c-eEecccccccccccchheeeccCccCCccccCHHHHhcCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 6 99999999876532211 112234467899999986544 7899999999999999998 88899887776666555
Q ss_pred HHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 230 FRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
......+.. ..++..+.+++.+||+.+|.+||++.++++
T Consensus 240 ~~~~~~~~~----------------------------~~~~~~~~~li~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 240 RNRQVLPCP----------------------------DDCPAWVYTLMLECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred HcCCcCCCC----------------------------CCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 443221111 247789999999999999999999999986
No 294
>KOG0612|consensus
Probab=100.00 E-value=2.6e-41 Score=311.50 Aligned_cols=265 Identities=27% Similarity=0.389 Sum_probs=226.0
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhcCCCCceeeceeEEeCc
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKELNHPNIVQLHDTMIENY 86 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 86 (313)
+++-.-+||.+++.||+|+||.|..++++.+++.||+|++.+-..- .....-|..|-.++.--+.+=|+.++..|.|+.
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 4555678999999999999999999999999999999999875422 223466777888888888999999999999999
Q ss_pred EEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 87 RLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 87 ~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
++|+||||++| +|..++.... ++++..++-.+..|..||..||+.|+||+||||+|||++..|. ++|+|||.+..
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GH-ikLADFGsClk 224 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGH-IKLADFGSCLK 224 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCc-EeeccchhHHh
Confidence 99999999986 7777777654 5999999999999999999999999999999999999999998 99999999887
Q ss_pred cC-CCCcccccccccccccchhhhcC---C-CCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCC
Q psy6391 166 FG-VPVRIYTHEVVTLWYRAPEVLLG---S-QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDN 240 (313)
Q Consensus 166 ~~-~~~~~~~~~~~~~~~~~PE~~~~---~-~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
.+ ++.-.....+||+.|.|||++.. . +.++...|.||+|+++|+|+.|..||....-...+-++++.....
T Consensus 225 m~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l---- 300 (1317)
T KOG0612|consen 225 MDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESL---- 300 (1317)
T ss_pred cCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhc----
Confidence 75 45555566799999999999832 2 458999999999999999999999999998888888888752111
Q ss_pred CCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC---HHHHhcCCCCCC
Q psy6391 241 WPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN---AENALKHKYFAD 302 (313)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps---~~e~l~h~~~~~ 302 (313)
.||+ ...+|.++.+||.+++.. |+.|.. ++++..||||.+
T Consensus 301 ------------~FP~---------~~~VSeeakdLI~~ll~~-~e~RLgrngiedik~HpFF~g 343 (1317)
T KOG0612|consen 301 ------------SFPD---------ETDVSEEAKDLIEALLCD-REVRLGRNGIEDIKNHPFFEG 343 (1317)
T ss_pred ------------CCCc---------ccccCHHHHHHHHHHhcC-hhhhcccccHHHHHhCccccC
Confidence 1110 024899999999999976 888888 999999999998
No 295
>KOG1187|consensus
Probab=100.00 E-value=7.6e-40 Score=284.26 Aligned_cols=270 Identities=23% Similarity=0.339 Sum_probs=204.8
Q ss_pred CCchhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEe
Q psy6391 5 ATDDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIE 84 (313)
Q Consensus 5 ~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 84 (313)
+..+++..+++|.....||+|+||.||+|... ++..||||++....... ...|.+|+.++.+++|||+++++|||.+
T Consensus 66 s~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e 142 (361)
T KOG1187|consen 66 SYDELRKATNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLE 142 (361)
T ss_pred eHHHHHHHHhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEec
Confidence 34678889999999999999999999999987 44889999877655442 3569999999999999999999999999
Q ss_pred Cc-EEEEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCCCCEEEecCCCeEEEec
Q psy6391 85 NY-RLYLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRR---VLHRDLKPQNLLIDAKSNIVKVAD 159 (313)
Q Consensus 85 ~~-~~~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~---i~H~di~~~Nil~~~~~~~~~l~d 159 (313)
.+ +..+|+||+. |+|.+.+...... +++|.+...|+.+++.||+|||... |+|+|||++|||+|.+.. .||+|
T Consensus 143 ~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~-aKlsD 220 (361)
T KOG1187|consen 143 GGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFN-AKLSD 220 (361)
T ss_pred CCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCC-EEccC
Confidence 98 5999999997 6998888764433 7999999999999999999999853 999999999999998877 99999
Q ss_pred CCCccccCCCCcccccc-cccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCC--hHHHHHHHH-HhcCC
Q psy6391 160 FGLARAFGVPVRIYTHE-VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS--EIDQLFRIF-RVLTT 235 (313)
Q Consensus 160 f~~~~~~~~~~~~~~~~-~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~--~~~~~~~~~-~~~~~ 235 (313)
||++............. .||.+|++||.+.. +..+.++||||+|+++.++++|+.+.+... ......... .....
T Consensus 221 FGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~-g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~ 299 (361)
T KOG1187|consen 221 FGLAKLGPEGDTSVSTTVMGTFGYLAPEYAST-GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEE 299 (361)
T ss_pred ccCcccCCccccceeeecCCCCccCChhhhcc-CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHC
Confidence 99995543312211222 78999999998876 458999999999999999999998887543 111111111 11111
Q ss_pred CCCCCCCCCCCCCCccccCCCCchhhhh-hhcc--CCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 236 PTEDNWPGVSKLPDYKTTFPEWSNFCLD-KHVK--NLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
. +..++....+. .... ..-..+..+..+|++.+|.+||+..+++.
T Consensus 300 ~----------------~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 300 G----------------KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred c----------------chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 0 00001000000 0000 01133668888999999999999999754
No 296
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=4.5e-39 Score=271.06 Aligned_cols=249 Identities=25% Similarity=0.394 Sum_probs=199.8
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
..++|.+.+.||+|++|.||++.+..+ ..+++|.+..... ....+.+|+.+++.++|++++++++++.. +..+++
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v 78 (260)
T cd05069 4 PRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIV 78 (260)
T ss_pred ChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEE
Confidence 457899999999999999999988744 4689998764332 23678899999999999999999998754 467899
Q ss_pred Eecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCC
Q psy6391 92 FEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV 170 (313)
Q Consensus 92 ~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~ 170 (313)
|||+.+ +|.+.+.... ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||.+.......
T Consensus 79 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~-~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 79 TEFMGKGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLV-CKIADFGLARLIEDNE 156 (260)
T ss_pred EEcCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCe-EEECCCccceEccCCc
Confidence 999985 8888886532 344789999999999999999999999999999999999998876 9999999997654332
Q ss_pred cc-cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy6391 171 RI-YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 248 (313)
Q Consensus 171 ~~-~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
.. .....++..|+|||...+. ..+.++|+||||+++|++++ |..||...........+......+..
T Consensus 157 ~~~~~~~~~~~~y~~Pe~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------- 225 (260)
T cd05069 157 YTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCP---------- 225 (260)
T ss_pred ccccCCCccchhhCCHHHhccC-CcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC----------
Confidence 11 1223346679999987654 48999999999999999999 99999887776665554332111100
Q ss_pred CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 249 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
..++..+.+++.+||+.||.+||+++++++
T Consensus 226 ------------------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 226 ------------------QGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred ------------------cccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 136789999999999999999999999875
No 297
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1e-39 Score=280.94 Aligned_cols=255 Identities=26% Similarity=0.367 Sum_probs=199.2
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcE--EEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcE
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGAL--VAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIENYR 87 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~--~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~ 87 (313)
..+++|++.+.||+|++|.||+|.++.++.. +++|.+.... .......+.+|+.++.++ +|+||+++++++..++.
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~ 82 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 82 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC-CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCC
Confidence 4678999999999999999999998766654 4666654322 222235678899999999 89999999999999999
Q ss_pred EEEEEecccc-CHHHHHhhCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCC
Q psy6391 88 LYLIFEFMSM-DLKKYIDTVP-------------KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSN 153 (313)
Q Consensus 88 ~~lv~e~~~~-~l~~~~~~~~-------------~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~ 153 (313)
+++|+||+++ +|.+++.... ....+++..++.++.||+.|++|||+.|++|+||+|+||+++.++.
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 83 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV 162 (303)
T ss_pred ceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCc
Confidence 9999999974 8888876432 1235789999999999999999999999999999999999998876
Q ss_pred eEEEecCCCccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHh
Q psy6391 154 IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRV 232 (313)
Q Consensus 154 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~ 232 (313)
++|+|||++........ .....++..|+|||.+... ..+.++||||||+++|++++ |..||......+........
T Consensus 163 -~kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~ 239 (303)
T cd05088 163 -AKIADFGLSRGQEVYVK-KTMGRLPVRWMAIESLNYS-VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 239 (303)
T ss_pred -EEeCccccCcccchhhh-cccCCCcccccCHHHHhcc-CCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcC
Confidence 99999999864321111 1111235569999988654 47899999999999999998 99999876665544433211
Q ss_pred cCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 233 LTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
... . .+ ..+++++.+++.+||+.+|++||++.+++.+
T Consensus 240 ~~~---~--------------~~-----------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 240 YRL---E--------------KP-----------LNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred CcC---C--------------CC-----------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 000 0 00 1367899999999999999999999999974
No 298
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.7e-39 Score=281.34 Aligned_cols=251 Identities=23% Similarity=0.359 Sum_probs=197.5
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCc----EEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGA----LVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRL 88 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~----~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 88 (313)
-.+|++.+.||+|++|.||+|.+..++. .|++|+++... .....+.+.+|+.+++.++||||+++++++..+ ..
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~ 83 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 83 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence 4679999999999999999998765554 38999986432 222346788999999999999999999998875 46
Q ss_pred EEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 89 YLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 89 ~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
+++++++. |+|.+.+... ...+++..+..++.||+.||.|||++|++|+||||+||+++.++. ++|+|||++....
T Consensus 84 ~~v~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~-~kl~DfG~a~~~~ 160 (316)
T cd05108 84 QLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLG 160 (316)
T ss_pred eeeeecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCc-EEEcccccccccc
Confidence 68888887 5888877653 234788999999999999999999999999999999999998877 9999999998764
Q ss_pred CCCccc--ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCC
Q psy6391 168 VPVRIY--THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 244 (313)
Q Consensus 168 ~~~~~~--~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
...... ....++..|++||.+... .++.++||||||+++|++++ |..||..................+.+
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~------ 233 (316)
T cd05108 161 ADEKEYHAEGGKVPIKWMALESILHR-IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP------ 233 (316)
T ss_pred CCCcceeccCCccceeecChHHhccC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCC------
Confidence 332211 112235679999988654 47999999999999999998 99999876655443322221111110
Q ss_pred CCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 245 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
+.++.++.+++.+||+.||++||++.+++.+
T Consensus 234 ----------------------~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 234 ----------------------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred ----------------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 2356889999999999999999999999986
No 299
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.5e-39 Score=277.05 Aligned_cols=253 Identities=25% Similarity=0.366 Sum_probs=201.8
Q ss_pred hhccceeeeeeccccceEEEEEEeC-----cCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNK-----VTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENY 86 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 86 (313)
...+|.+.+.||+|++|.||.+... .++..+++|.+...... ....+.+|+.+++.++|+||+++++++...+
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (291)
T cd05094 3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLA--ARKDFQREAELLTNLQHEHIVKFYGVCGDGD 80 (291)
T ss_pred chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHH--HHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence 3568999999999999999999853 24556888887543321 1256889999999999999999999999999
Q ss_pred EEEEEEecccc-CHHHHHhhCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCC
Q psy6391 87 RLYLIFEFMSM-DLKKYIDTVP-------------KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKS 152 (313)
Q Consensus 87 ~~~lv~e~~~~-~l~~~~~~~~-------------~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~ 152 (313)
..++||||+++ +|.+++.... ..+.+++..++.++.||+.++.+||++|++|+||+|+||+++.++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANL 160 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC
Confidence 99999999974 8888876532 123478999999999999999999999999999999999999887
Q ss_pred CeEEEecCCCccccCCCC--cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy6391 153 NIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRI 229 (313)
Q Consensus 153 ~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~ 229 (313)
. ++|+|||++....... .......++..|+|||.+.+. .++.++||||+|+++|+|++ |..||...........+
T Consensus 161 ~-~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~ 238 (291)
T cd05094 161 L-VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR-KFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI 238 (291)
T ss_pred c-EEECCCCcccccCCCceeecCCCCCcceeecChHHhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 6 9999999987654321 112234457789999988764 48889999999999999998 99999877766655443
Q ss_pred HHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 230 FRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
........ ...++..+.+++.+||+.||++||++.++++
T Consensus 239 ~~~~~~~~----------------------------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 239 TQGRVLER----------------------------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred hCCCCCCC----------------------------CccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 32111100 0236789999999999999999999999975
No 300
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.1e-39 Score=278.37 Aligned_cols=253 Identities=25% Similarity=0.349 Sum_probs=199.0
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCc--EEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGA--LVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIENYRLY 89 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~--~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~ 89 (313)
+++|++.+.||+|++|.||+|..+.++. .+++|.++... .....+.+.+|+.++.++ +||||+++++++...+..+
T Consensus 1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 1 WEDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA-SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred CccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC-CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 4689999999999999999999876654 46888776322 112235678899999999 7999999999999999999
Q ss_pred EEEeccc-cCHHHHHhhCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeE
Q psy6391 90 LIFEFMS-MDLKKYIDTVP-------------KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIV 155 (313)
Q Consensus 90 lv~e~~~-~~l~~~~~~~~-------------~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~ 155 (313)
+++||++ ++|.+++.... ....+++..++.++.||+.||++||+.|++|+||||+||+++.++. +
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~-~ 158 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLA-S 158 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCe-E
Confidence 9999997 48888876422 1135889999999999999999999999999999999999988776 9
Q ss_pred EEecCCCccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcC
Q psy6391 156 KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLT 234 (313)
Q Consensus 156 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~ 234 (313)
+|+|||++......... .....+..|+|||.+... .++.++||||||+++|+|++ |..||.................
T Consensus 159 kl~dfg~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~ 236 (297)
T cd05089 159 KIADFGLSRGEEVYVKK-TMGRLPVRWMAIESLNYS-VYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 236 (297)
T ss_pred EECCcCCCccccceecc-CCCCcCccccCchhhccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC
Confidence 99999998643221111 111224569999988654 47899999999999999997 9999988776665554432111
Q ss_pred CCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 235 TPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
.... ..++.++.+|+.+||+.+|.+||+++++++.
T Consensus 237 ~~~~----------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 237 MEKP----------------------------RNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred CCCC----------------------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1100 2477999999999999999999999999653
No 301
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.2e-39 Score=274.65 Aligned_cols=252 Identities=21% Similarity=0.292 Sum_probs=196.6
Q ss_pred ceeeeeeccccceEEEEEEeCcCCc--EEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC------cE
Q psy6391 16 YEKVEKIGEGTYGVVYKAKNKVTGA--LVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN------YR 87 (313)
Q Consensus 16 y~~~~~lg~g~~~~v~~~~~~~~~~--~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~ 87 (313)
+.+.+.||+|++|.||+|.+..++. .+++|.++...........+..|+.+++.++|+||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3567899999999999999876664 689998876543333346788899999999999999999987532 24
Q ss_pred EEEEEecccc-CHHHHHhhC---CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCc
Q psy6391 88 LYLIFEFMSM-DLKKYIDTV---PKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLA 163 (313)
Q Consensus 88 ~~lv~e~~~~-~l~~~~~~~---~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~ 163 (313)
.++++||+.+ +|.+.+... .....+++..+..++.||+.||.|||++|++|+||||+||+++.++. ++|+|||.+
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~-~kl~Dfg~~ 159 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMN-VCVADFGLS 159 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCC-EEECCCCcc
Confidence 6899999984 777765321 12345889999999999999999999999999999999999998876 999999998
Q ss_pred cccCCCCcc--cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCC
Q psy6391 164 RAFGVPVRI--YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDN 240 (313)
Q Consensus 164 ~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
......... .....++..|++||.+... .++.++|+||||+++|++++ |..||...........+......+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~--- 235 (272)
T cd05075 160 KKIYNGDYYRQGRIAKMPVKWIAIESLADR-VYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQ--- 235 (272)
T ss_pred cccCcccceecCCcccCCcccCCHHHccCC-CcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCC---
Confidence 765433211 1122346679999988654 48999999999999999999 8999987766555444433211110
Q ss_pred CCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 241 WPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
...++..+.++|.+||+.||++|||+.+++++
T Consensus 236 -------------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 236 -------------------------PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred -------------------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 02467889999999999999999999999863
No 302
>KOG4721|consensus
Probab=100.00 E-value=2.4e-41 Score=292.27 Aligned_cols=252 Identities=24% Similarity=0.349 Sum_probs=209.3
Q ss_pred CchhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC
Q psy6391 6 TDDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN 85 (313)
Q Consensus 6 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 85 (313)
.+.|.+-++...-++=||.|+.|.||+|+.. ++.||||.++..+ ..++.-|+.|+|+||+.+.|+|...
T Consensus 116 ~e~WeiPFe~IsELeWlGSGaQGAVF~Grl~--netVAVKKV~elk---------ETdIKHLRkLkH~NII~FkGVCtqs 184 (904)
T KOG4721|consen 116 EELWEIPFEEISELEWLGSGAQGAVFLGRLH--NETVAVKKVRELK---------ETDIKHLRKLKHPNIITFKGVCTQS 184 (904)
T ss_pred hhhccCCHHHhhhhhhhccCcccceeeeecc--CceehhHHHhhhh---------hhhHHHHHhccCcceeeEeeeecCC
Confidence 3556667777777888999999999999886 7899999886432 2568889999999999999999999
Q ss_pred cEEEEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcc
Q psy6391 86 YRLYLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLAR 164 (313)
Q Consensus 86 ~~~~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~ 164 (313)
..++|||||+. |.|..++.. +.+++......|..+|+.+++|||.++|+|+|||+-|||+..++- +||+|||.+.
T Consensus 185 PcyCIiMEfCa~GqL~~VLka---~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~-VKIsDFGTS~ 260 (904)
T KOG4721|consen 185 PCYCIIMEFCAQGQLYEVLKA---GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDV-VKISDFGTSK 260 (904)
T ss_pred ceeEEeeeccccccHHHHHhc---cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccce-EEeccccchH
Confidence 99999999997 688777764 556999999999999999999999999999999999999998876 9999999998
Q ss_pred ccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHH-hcCCCCCCCCCC
Q psy6391 165 AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFR-VLTTPTEDNWPG 243 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~ 243 (313)
.+..- +......||..|||||++.+. +.+.+.||||+|++||+|+||+.||...+...++--.-. .+..|.+
T Consensus 261 e~~~~-STkMSFaGTVaWMAPEvIrne-PcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvP----- 333 (904)
T KOG4721|consen 261 ELSDK-STKMSFAGTVAWMAPEVIRNE-PCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVP----- 333 (904)
T ss_pred hhhhh-hhhhhhhhhHhhhCHHHhhcC-CcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCc-----
Confidence 87654 444557899999999999874 499999999999999999999999987655333211110 0111111
Q ss_pred CCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 244 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
..+|+-+.=||+.||+..|.+||+++++|.|==+..
T Consensus 334 -----------------------stcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~ 369 (904)
T KOG4721|consen 334 -----------------------STCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIAS 369 (904)
T ss_pred -----------------------ccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcC
Confidence 257888999999999999999999999999855544
No 303
>KOG0603|consensus
Probab=100.00 E-value=2.5e-40 Score=290.29 Aligned_cols=250 Identities=28% Similarity=0.445 Sum_probs=203.0
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcEEEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIENYRLYL 90 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l 90 (313)
..++|.+...+|.|+++.|-.+.+..+++..++|++.... ..-.+|+.++... +||||++.++.+.++.+.|+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~ 393 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYL 393 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc------cccccccchhhhhcCCCcceeecceecCCceeee
Confidence 5788999999999999999999999999999999998763 2223566555555 79999999999999999999
Q ss_pred EEeccccC-HHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEe-cCCCeEEEecCCCccccCC
Q psy6391 91 IFEFMSMD-LKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLID-AKSNIVKVADFGLARAFGV 168 (313)
Q Consensus 91 v~e~~~~~-l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~-~~~~~~~l~df~~~~~~~~ 168 (313)
|||.+.|. +.+.+. ... ....++..|+.+|+.|+.|||.+|++|||+||+|||++ ..+. ++|+|||.+.....
T Consensus 394 v~e~l~g~ell~ri~---~~~-~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~-lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 394 VMELLDGGELLRRIR---SKP-EFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGH-LRLTYFGFWSELER 468 (612)
T ss_pred eehhccccHHHHHHH---hcc-hhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCc-EEEEEechhhhCch
Confidence 99999984 223332 222 23377888999999999999999999999999999994 6666 99999999987754
Q ss_pred CCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy6391 169 PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 248 (313)
Q Consensus 169 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
. +...+-|..|.|||+... ..++.++|+||||++||+|++|+.||........+..... .+...
T Consensus 469 ~---~~tp~~t~~y~APEvl~~-~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~---~~~~s--------- 532 (612)
T KOG0603|consen 469 S---CDTPALTLQYVAPEVLAI-QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQ---MPKFS--------- 532 (612)
T ss_pred h---hcccchhhcccChhhhcc-CCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhc---CCccc---------
Confidence 4 344566889999999874 4599999999999999999999999998766523222222 21111
Q ss_pred CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCCC
Q psy6391 249 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL 306 (313)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~~ 306 (313)
..+|+++++||..||+.||.+||++.+++.||||.+...+
T Consensus 533 ------------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~~~t~ 572 (612)
T KOG0603|consen 533 ------------------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFLSHPTF 572 (612)
T ss_pred ------------------cccCHHHHHHHHHhccCChhhCcChhhhccCcchhcCCCC
Confidence 2589999999999999999999999999999999544433
No 304
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2.3e-39 Score=274.59 Aligned_cols=252 Identities=21% Similarity=0.270 Sum_probs=198.4
Q ss_pred ceeeeeeccccceEEEEEEeCcC---CcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcE-----
Q psy6391 16 YEKVEKIGEGTYGVVYKAKNKVT---GALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYR----- 87 (313)
Q Consensus 16 y~~~~~lg~g~~~~v~~~~~~~~---~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~----- 87 (313)
|++.+.||+|++|.||.|....+ +..+++|.++...........+.+|+..++.++|+|++++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 57889999999999999987543 4789999987654443334578899999999999999999998875543
Q ss_pred -EEEEEecccc-CHHHHHhhCC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCC
Q psy6391 88 -LYLIFEFMSM-DLKKYIDTVP---KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGL 162 (313)
Q Consensus 88 -~~lv~e~~~~-~l~~~~~~~~---~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~ 162 (313)
.++++||+.+ +|...+.... ....+++..+..++.|++.||.|||+.|++|+||||+||+++.++. ++|+|||.
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~-~kl~dfg~ 159 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMT-VCVADFGL 159 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCe-EEECCccc
Confidence 7999999985 7777764432 2345899999999999999999999999999999999999998876 99999999
Q ss_pred ccccCCCCcc--cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCC
Q psy6391 163 ARAFGVPVRI--YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTED 239 (313)
Q Consensus 163 ~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
+......... .....++..|+|||.+.. ..++.++|+||+|+++|++++ |..||......+.............
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-- 236 (273)
T cd05035 160 SKKIYSGDYYRQGRIAKMPVKWIAIESLAD-RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQ-- 236 (273)
T ss_pred eeeccccccccccccccCCccccCHhhccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC--
Confidence 8765332211 111233567999998755 448899999999999999999 8999987776655544433211110
Q ss_pred CCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 240 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
...++.++.+++.+||+.||.+||++.+++.+
T Consensus 237 --------------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 237 --------------------------PEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred --------------------------CcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 02467899999999999999999999999863
No 305
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.1e-39 Score=287.67 Aligned_cols=261 Identities=22% Similarity=0.300 Sum_probs=202.1
Q ss_pred CchhhhhhccceeeeeeccccceEEEEEEeCcC-----CcEEEEEEecccCCCCCCchhHHHHHHHHhhcC-CCCceeec
Q psy6391 6 TDDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVT-----GALVAIKKIRMENDDEGIPATAIREISVLKELN-HPNIVQLH 79 (313)
Q Consensus 6 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~-----~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~ 79 (313)
..++....++|.+.+.||+|+||.||+|.+... +..||+|++..... ....+.+.+|+.+++.++ ||||++++
T Consensus 29 ~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~~l~~l~~HpnIv~l~ 107 (400)
T cd05105 29 DSRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR-SSEKQALMSELKIMTHLGPHLNIVNLL 107 (400)
T ss_pred CCceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhcCCCCCeeeEE
Confidence 345666678999999999999999999986432 34699999865432 222367889999999995 99999999
Q ss_pred eeEEeCcEEEEEEecccc-CHHHHHhhCC---------------------------------------------------
Q psy6391 80 DTMIENYRLYLIFEFMSM-DLKKYIDTVP--------------------------------------------------- 107 (313)
Q Consensus 80 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~--------------------------------------------------- 107 (313)
+++.+.+..++||||+.+ +|.+++....
T Consensus 108 ~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (400)
T cd05105 108 GACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQ 187 (400)
T ss_pred EEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccc
Confidence 999999999999999975 7877664321
Q ss_pred ------------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCC
Q psy6391 108 ------------------------------------------KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQN 145 (313)
Q Consensus 108 ------------------------------------------~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~N 145 (313)
....+++..+..++.||+.||.|||+.|++|+||||+|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~N 267 (400)
T cd05105 188 YVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARN 267 (400)
T ss_pred cchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHh
Confidence 01247788889999999999999999999999999999
Q ss_pred EEEecCCCeEEEecCCCccccCCCCc--ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCCh
Q psy6391 146 LLIDAKSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSE 222 (313)
Q Consensus 146 il~~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~ 222 (313)
|+++.++. ++|+|||++........ ......++..|+|||.+.+. .++.++||||||+++|+|++ |..||.....
T Consensus 268 ill~~~~~-~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwSlGvil~ellt~g~~P~~~~~~ 345 (400)
T cd05105 268 VLLAQGKI-VKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDN-LYTTLSDVWSYGILLWEIFSLGGTPYPGMIV 345 (400)
T ss_pred EEEeCCCE-EEEEeCCcceeccccccccccCCcCCCcceEChhhhcCC-CCCchhhHHHHHHHHHHHHHCCCCCCcccch
Confidence 99998766 99999999876532211 11223456779999988664 47899999999999999997 9999986544
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 223 IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
.............+.. ...++.++.+++.+||+.||++||++.++.+
T Consensus 346 ~~~~~~~~~~~~~~~~---------------------------~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 346 DSTFYNKIKSGYRMAK---------------------------PDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred hHHHHHHHhcCCCCCC---------------------------CccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 3333333221111100 0247789999999999999999999998865
No 306
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=5e-39 Score=270.08 Aligned_cols=247 Identities=22% Similarity=0.376 Sum_probs=203.7
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEE
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYL 90 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 90 (313)
...++|++.+.||.|++|.||++... ++.+++|.+..... ....+.+|+.+++.++|+|++++++++.+.+..++
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 77 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYI 77 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEE
Confidence 35678999999999999999999875 78899999975543 34678899999999999999999999999999999
Q ss_pred EEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 91 IFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 91 v~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
|||++++ +|.+.+.... ...+++..++.++.|++.+|.|||+.|++|+||+|+||+++.++. ++|+|||.+......
T Consensus 78 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~-~~l~d~g~~~~~~~~ 155 (256)
T cd05039 78 VTEYMAKGSLVDYLRSRG-RAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLV-AKVSDFGLAKEASQG 155 (256)
T ss_pred EEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCC-EEEcccccccccccc
Confidence 9999985 8888876532 235899999999999999999999999999999999999998877 999999998766332
Q ss_pred CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy6391 170 VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 248 (313)
Q Consensus 170 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
.. ....+..|+|||.+... ..+.++|+||+|++++++++ |..||...................
T Consensus 156 ~~---~~~~~~~~~ape~~~~~-~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~------------ 219 (256)
T cd05039 156 QD---SGKLPVKWTAPEALREK-KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRME------------ 219 (256)
T ss_pred cc---cCCCcccccCchhhcCC-cCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCC------------
Confidence 21 22345679999988654 47889999999999999997 999998876665544443211000
Q ss_pred CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 249 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
.+ ..+++++.++|++||+.+|.+||++.+++.
T Consensus 220 -----~~-----------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 220 -----AP-----------EGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred -----Cc-----------cCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 00 246899999999999999999999999985
No 307
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=3.1e-39 Score=273.12 Aligned_cols=251 Identities=20% Similarity=0.317 Sum_probs=200.7
Q ss_pred hccceeeeeeccccceEEEEEEeCcCC---cEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTG---ALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLY 89 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~---~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 89 (313)
.++|++.+.||+|++|.||+|.+..++ ..+++|.++..... .....+.+|+.++++++||||+++++++..++..+
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTE-KQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM 81 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCH-HHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 468999999999999999999876443 36899988654322 22357888999999999999999999999999999
Q ss_pred EEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCC
Q psy6391 90 LIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGV 168 (313)
Q Consensus 90 lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~ 168 (313)
+||||+++ +|.+.+... ...++...+..++.|++.++.+||+.|++|+||+|+||+++.++. ++|+|||.+.....
T Consensus 82 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~-~~l~dfg~~~~~~~ 158 (267)
T cd05066 82 IVTEYMENGSLDAFLRKH--DGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLV-CKVSDFGLSRVLED 158 (267)
T ss_pred EEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCe-EEeCCCCccccccc
Confidence 99999975 788887653 345889999999999999999999999999999999999988876 99999999876543
Q ss_pred CCccc---ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCC
Q psy6391 169 PVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 244 (313)
Q Consensus 169 ~~~~~---~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
..... ....++..|+|||.+.+. .++.++|+||+|+++|++++ |..||......+....+......+.
T Consensus 159 ~~~~~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~------- 230 (267)
T cd05066 159 DPEAAYTTRGGKIPIRWTAPEAIAYR-KFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPA------- 230 (267)
T ss_pred ccceeeecCCCccceeecCHhHhccC-ccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCC-------
Confidence 22111 111224579999998654 48999999999999999886 9999987766555544433211110
Q ss_pred CCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 245 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...+++++.+++.+|++.+|.+||++.++++
T Consensus 231 ---------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 231 ---------------------PMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred ---------------------CCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 0236789999999999999999999999975
No 308
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=4.3e-39 Score=276.93 Aligned_cols=258 Identities=21% Similarity=0.347 Sum_probs=203.8
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEe-----CcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeecee
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKN-----KVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDT 81 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~-----~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~ 81 (313)
++....++|.+.+.||+|++|.||++.+ ..++..+++|.++.... ....+.+.+|+.+++++ +|+||++++++
T Consensus 29 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 107 (302)
T cd05055 29 KWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH-SSEREALMSELKIMSHLGNHENIVNLLGA 107 (302)
T ss_pred cccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC-hHHHHHHHHHHHHHHhccCCCCcceEEEE
Confidence 4566678999999999999999999975 23456799998865432 22235688999999999 79999999999
Q ss_pred EEeCcEEEEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecC
Q psy6391 82 MIENYRLYLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADF 160 (313)
Q Consensus 82 ~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df 160 (313)
+...+..+++|||+. ++|.+++.... ...+++.++..++.||+.+|.|||++|++|+||+|+||+++.++. ++++||
T Consensus 108 ~~~~~~~~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~-~~l~df 185 (302)
T cd05055 108 CTIGGPILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKI-VKICDF 185 (302)
T ss_pred EecCCceEEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCe-EEECCC
Confidence 999999999999997 58888876432 234899999999999999999999999999999999999987765 999999
Q ss_pred CCccccCCCCc--ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCC
Q psy6391 161 GLARAFGVPVR--IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPT 237 (313)
Q Consensus 161 ~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~ 237 (313)
|.+........ ......++..|+|||.+.... ++.++||||+|+++|++++ |..||..................+.
T Consensus 186 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~ 264 (302)
T cd05055 186 GLARDIMNDSNYVVKGNARLPVKWMAPESIFNCV-YTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMA 264 (302)
T ss_pred cccccccCCCceeecCCCCcccccCCHhhhccCC-CCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCC
Confidence 99876533221 111223467799999886644 7899999999999999998 9999987665544444333111110
Q ss_pred CCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 238 EDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
. ....++++.+++.+||+.+|++|||+.++++
T Consensus 265 ~---------------------------~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 265 Q---------------------------PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred C---------------------------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 0 0136789999999999999999999999985
No 309
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=3.2e-39 Score=274.86 Aligned_cols=253 Identities=23% Similarity=0.362 Sum_probs=201.0
Q ss_pred hhccceeeeeeccccceEEEEEEe-----CcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKN-----KVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENY 86 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~-----~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 86 (313)
..++|.+.++||+|++|.||.+.. ..++..+++|.+.... ......+.+|+++++.++|+||+++++++.+.+
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (280)
T cd05092 3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTVLQHQHIVRFYGVCTEGR 80 (280)
T ss_pred ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC--HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC
Confidence 467899999999999999999974 2346678889876433 222457889999999999999999999999999
Q ss_pred EEEEEEecccc-CHHHHHhhCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCC
Q psy6391 87 RLYLIFEFMSM-DLKKYIDTVPK------------GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSN 153 (313)
Q Consensus 87 ~~~lv~e~~~~-~l~~~~~~~~~------------~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~ 153 (313)
..++++||+.+ +|.+++..... ...+++..+..++.||+.|+.|||+.|++|+||+|+||+++.++.
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~ 160 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLV 160 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCC
Confidence 99999999975 88888765322 134789999999999999999999999999999999999998766
Q ss_pred eEEEecCCCccccCCCC--cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy6391 154 IVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIF 230 (313)
Q Consensus 154 ~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~ 230 (313)
++|+|||++....... .......++..|+|||.+.+. .++.++|+||||+++|+|++ |..||.............
T Consensus 161 -~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 238 (280)
T cd05092 161 -VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYR-KFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT 238 (280)
T ss_pred -EEECCCCceeEcCCCceeecCCCccccccccCHHHhccC-CcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHH
Confidence 9999999986543221 111222346779999988654 48999999999999999998 999998776655554443
Q ss_pred HhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 231 RVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
........ ..+++.+.+++.+||+.||++||++.++++
T Consensus 239 ~~~~~~~~----------------------------~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 239 QGRELERP----------------------------RTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred cCccCCCC----------------------------CCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 32111000 247899999999999999999999999974
No 310
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.3e-39 Score=284.07 Aligned_cols=256 Identities=21% Similarity=0.342 Sum_probs=197.0
Q ss_pred hhccceeeeeeccccceEEEEEEeC-----cCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEe-
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNK-----VTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIE- 84 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~- 84 (313)
--++|++.+.||.|+||.||+|.+. .+++.|++|+++..... .....+..|+.+++++ +|+||+++++++..
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATA-SEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCH-HHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 3458999999999999999999753 33578999998643322 1224677899999999 89999999998864
Q ss_pred CcEEEEEEecccc-CHHHHHhhCCC-------------------------------------------------------
Q psy6391 85 NYRLYLIFEFMSM-DLKKYIDTVPK------------------------------------------------------- 108 (313)
Q Consensus 85 ~~~~~lv~e~~~~-~l~~~~~~~~~------------------------------------------------------- 108 (313)
+..+++++||+++ +|.+.+.....
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 4678899999986 78777653211
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc--cccccccccccc
Q psy6391 109 ---GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYR 183 (313)
Q Consensus 109 ---~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~ 183 (313)
..++++..+..++.||+.||.|||++|++|+||||+|||++.++. ++|+|||++........ ......++..|+
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~-vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNV-VKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCc-EEEeccccchhcccCcchhhccCCCCCcccc
Confidence 125789999999999999999999999999999999999998876 99999999976532211 111223456799
Q ss_pred chhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhh
Q psy6391 184 APEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCL 262 (313)
Q Consensus 184 ~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (313)
|||.+.+.. ++.++||||+|+++|+|++ |..||......+...........+..
T Consensus 243 aPE~~~~~~-~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~------------------------ 297 (337)
T cd05054 243 APESIFDKV-YTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRA------------------------ 297 (337)
T ss_pred CcHHhcCCC-CCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCC------------------------
Confidence 999987644 8999999999999999998 99999865443333333221111000
Q ss_pred hhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 263 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 263 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
....++++.+++.+||+.+|++||++.++++|
T Consensus 298 ---~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 298 ---PEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred ---CccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 02367899999999999999999999999875
No 311
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=7.1e-39 Score=269.19 Aligned_cols=247 Identities=24% Similarity=0.379 Sum_probs=199.2
Q ss_pred hhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEE-eCcEE
Q psy6391 10 KSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMI-ENYRL 88 (313)
Q Consensus 10 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~ 88 (313)
...+++|++.+.||+|++|.||++... +..+++|.++... ....+.+|+.++++++|++++++++++. .++..
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 75 (256)
T cd05082 2 ALNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL 75 (256)
T ss_pred CccHHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCce
Confidence 346789999999999999999999775 7789999886432 2357889999999999999999999765 55678
Q ss_pred EEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 89 YLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 89 ~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
++++||+++ +|.+.+.... ...+++..+..++.|++.+|.+||++|++|+||+|+||+++.++. ++|+|||++....
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~-~kl~dfg~~~~~~ 153 (256)
T cd05082 76 YIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNV-AKVSDFGLTKEAS 153 (256)
T ss_pred EEEEECCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCc-EEecCCccceecc
Confidence 999999985 8888876532 334789999999999999999999999999999999999998876 9999999987543
Q ss_pred CCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 168 VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 168 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
... ....++..|+|||.+... .++.++|+||||+++|+|++ |+.||...........+.+.....
T Consensus 154 ~~~---~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~---------- 219 (256)
T cd05082 154 STQ---DTGKLPVKWTAPEALREK-KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD---------- 219 (256)
T ss_pred ccC---CCCccceeecCHHHHccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCC----------
Confidence 322 222345679999988654 47899999999999999997 999998766555444433211000
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
. .+.+++.+.+++.+|++.+|++|||+.++++
T Consensus 220 -------~-----------~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 220 -------A-----------PDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred -------C-----------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 0 0247899999999999999999999999975
No 312
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=4.8e-39 Score=270.38 Aligned_cols=242 Identities=24% Similarity=0.371 Sum_probs=193.2
Q ss_pred eeeccccceEEEEEEeCcCC---cEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEeccc
Q psy6391 20 EKIGEGTYGVVYKAKNKVTG---ALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMS 96 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~---~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 96 (313)
+.||+|++|.||+|.....+ ..+++|.+...... .....+.+|+.+++.++|+|++++++++.. +..+++|||+.
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCC
Confidence 46899999999999875444 78999998765543 234678899999999999999999998764 46799999997
Q ss_pred c-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccccc
Q psy6391 97 M-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTH 175 (313)
Q Consensus 97 ~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~ 175 (313)
+ +|.+.+... ..+++..+..++.|++.++.+||..|++|+||+|+||+++.++. ++|+|||.+............
T Consensus 79 ~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~-~kl~df~~~~~~~~~~~~~~~ 154 (257)
T cd05060 79 LGPLLKYLKKR---REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQ-AKISDFGMSRALGAGSDYYRA 154 (257)
T ss_pred CCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCc-EEeccccccceeecCCccccc
Confidence 5 888887653 25899999999999999999999999999999999999998877 999999998766443322111
Q ss_pred ---ccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcc
Q psy6391 176 ---EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK 251 (313)
Q Consensus 176 ---~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (313)
..++..|+|||.+.+. .++.++|+||||+++|++++ |..||...+..+....+......+.
T Consensus 155 ~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------- 219 (257)
T cd05060 155 TTAGRWPLKWYAPECINYG-KFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPR-------------- 219 (257)
T ss_pred ccCccccccccCHHHhcCC-CCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCC--------------
Confidence 1224579999988654 48999999999999999998 9999988776555444432211100
Q ss_pred ccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 252 TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...++..+.++|.+||+.+|++||++.++++
T Consensus 220 --------------~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 220 --------------PEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred --------------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 0246789999999999999999999999875
No 313
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=4.8e-39 Score=273.63 Aligned_cols=251 Identities=22% Similarity=0.322 Sum_probs=197.7
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCc----EEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGA----LVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYR 87 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~----~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 87 (313)
..++|++.+.||.|++|+||+|.+..++. .|++|+++.... ......+.+|+.+++.++|+||+++++++... .
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~ 82 (279)
T cd05109 5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS-PKANKEILDEAYVMAGVGSPYVCRLLGICLTS-T 82 (279)
T ss_pred chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC-HHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-C
Confidence 35789999999999999999999776665 479998865432 22235678899999999999999999998765 4
Q ss_pred EEEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 88 LYLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 88 ~~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
.++++++++ |+|.+.+... ...+++..+..++.||+.||.|||++|++|+||||+||+++.++. ++|+|||++...
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~-~kL~dfG~~~~~ 159 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVREN--KDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNH-VKITDFGLARLL 159 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCc-EEECCCCceeec
Confidence 678999997 5887777642 345899999999999999999999999999999999999988776 999999998765
Q ss_pred CCCCcc--cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCC
Q psy6391 167 GVPVRI--YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 167 ~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
...... .....++..|+|||.+.+. .++.++||||||+++|++++ |..||...........+......+..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~----- 233 (279)
T cd05109 160 DIDETEYHADGGKVPIKWMALESILHR-RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQP----- 233 (279)
T ss_pred ccccceeecCCCccchhhCCHHHhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCC-----
Confidence 432221 1112345679999998654 48899999999999999998 99999876655544433321111110
Q ss_pred CCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 244 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...+.++.+++.+||+.||++||++.+++.
T Consensus 234 -----------------------~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 234 -----------------------PICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred -----------------------ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 236789999999999999999999999984
No 314
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.9e-39 Score=277.95 Aligned_cols=258 Identities=23% Similarity=0.344 Sum_probs=202.9
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCc-------CCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeec
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKV-------TGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLH 79 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~-------~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~ 79 (313)
++....++|.+.+.||+|+||.||.+.+.. +...+++|.+..... ......+.+|+.+++.+ +|+||++++
T Consensus 12 ~~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~ 90 (307)
T cd05098 12 RWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLL 90 (307)
T ss_pred cceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC-hHHHHHHHHHHHHHHHhcCCCCEeeEE
Confidence 455556899999999999999999998642 234699999875432 22235677899999999 799999999
Q ss_pred eeEEeCcEEEEEEecccc-CHHHHHhhCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCC
Q psy6391 80 DTMIENYRLYLIFEFMSM-DLKKYIDTVPK-------------GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQN 145 (313)
Q Consensus 80 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~-------------~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~N 145 (313)
+++..++..++||||+++ +|.+++..... ...+++..+..++.||+.||.|||+.|++|+||+|+|
T Consensus 91 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N 170 (307)
T cd05098 91 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARN 170 (307)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHh
Confidence 999999999999999985 88888875321 2348889999999999999999999999999999999
Q ss_pred EEEecCCCeEEEecCCCccccCCCCcc--cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCCh
Q psy6391 146 LLIDAKSNIVKVADFGLARAFGVPVRI--YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSE 222 (313)
Q Consensus 146 il~~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~ 222 (313)
|+++.++. ++|+|||.+......... .....++..|+|||.+.+. .++.++|+||||+++|+|++ |..||.....
T Consensus 171 ill~~~~~-~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~~~g~~p~~~~~~ 248 (307)
T cd05098 171 VLVTEDNV-MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 248 (307)
T ss_pred eEEcCCCc-EEECCCcccccccccchhhccccCCCccceeChHHhccC-CCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 99998876 999999998755322111 1111234679999988664 47899999999999999998 8899987665
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 223 IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
.+....+........ ...++.++.+++.+||..+|++||++.++++
T Consensus 249 ~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 249 EELFKLLKEGHRMDK----------------------------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred HHHHHHHHcCCCCCC----------------------------CCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 554444332111000 0246789999999999999999999999986
No 315
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=7.1e-39 Score=269.84 Aligned_cols=251 Identities=25% Similarity=0.388 Sum_probs=201.8
Q ss_pred hhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEE
Q psy6391 10 KSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLY 89 (313)
Q Consensus 10 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 89 (313)
....++|++.+.||+|++|.||++.+. .+..+++|.+..... ....+.+|+.+++.++|++++++++.+.+ ...+
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~ 76 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIY 76 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChh---HHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeE
Confidence 456789999999999999999999865 455799998864322 23678899999999999999999999887 6789
Q ss_pred EEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCC
Q psy6391 90 LIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGV 168 (313)
Q Consensus 90 lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~ 168 (313)
++|||+++ +|.+++.... ...++...+..++.||+.||.+||+.|++|+||+|+||+++.++. ++|+|||.+.....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~-~~l~d~~~~~~~~~ 154 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLV-CKIADFGLARVIED 154 (260)
T ss_pred EEEEeCCCCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCc-EEECCCcceeeccC
Confidence 99999974 8888887632 345788899999999999999999999999999999999998876 99999999876543
Q ss_pred CCc-ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 169 PVR-IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 169 ~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
... ......++..|+|||.+... .++.++|+||||+++|++++ |+.||...+.......+......+.
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~--------- 224 (260)
T cd05073 155 NEYTAREGAKFPIKWTAPEAINFG-SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR--------- 224 (260)
T ss_pred CCcccccCCcccccccCHhHhccC-CcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCC---------
Confidence 221 11122345679999988654 47889999999999999998 9999988776655554433211110
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...++.++.+++.+|++.+|++||++.++++
T Consensus 225 -------------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 225 -------------------PENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred -------------------cccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 0247789999999999999999999998864
No 316
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.1e-38 Score=268.09 Aligned_cols=249 Identities=26% Similarity=0.379 Sum_probs=200.7
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
..+|++.+.||.|++|.||++.+. ++..+++|.+...... ...+.+|+++++.++||+++++++++......++++
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVF 78 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEE
Confidence 468999999999999999999876 4678999988654332 357889999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
||+.+ +|.+.+... ...+++..++.++.|++.++.+||+.|++|+||+|+||+++.++. ++|+|||.+........
T Consensus 79 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~-~~l~d~g~~~~~~~~~~ 155 (256)
T cd05112 79 EFMEHGCLSDYLRAQ--RGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQV-VKVSDFGMTRFVLDDQY 155 (256)
T ss_pred EcCCCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCe-EEECCCcceeecccCcc
Confidence 99985 777776642 235789999999999999999999999999999999999987766 99999999876533211
Q ss_pred -ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy6391 172 -IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 249 (313)
Q Consensus 172 -~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (313)
......++..|+|||.+.+. .++.++|+||||+++|++++ |..||...........+........
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~-~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~------------ 222 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFS-KYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYK------------ 222 (256)
T ss_pred cccCCCccchhhcCHhHhccC-CcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCC------------
Confidence 11122345679999988654 48889999999999999998 9999987766555555432111100
Q ss_pred ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 250 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
+ ...+..+.+++.+||+.+|++||++.++++.
T Consensus 223 -----~-----------~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 223 -----P-----------RLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred -----C-----------CCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 0 1257899999999999999999999999863
No 317
>KOG0671|consensus
Probab=100.00 E-value=3.4e-41 Score=278.82 Aligned_cols=283 Identities=31% Similarity=0.500 Sum_probs=217.6
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcC--CC----CceeeceeEEeCc
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELN--HP----NIVQLHDTMIENY 86 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~--~~----~i~~~~~~~~~~~ 86 (313)
..+|.+.+.+|+|.||.|-.+.+..++..||+|+++.-... .++.+-|+++++.+. .| .++...++|...+
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY---reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg 164 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY---REAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG 164 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHH---hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC
Confidence 78999999999999999999999989999999999754332 366678999999983 22 3677777799999
Q ss_pred EEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCC--------------
Q psy6391 87 RLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKS-------------- 152 (313)
Q Consensus 87 ~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~-------------- 152 (313)
+.+||+|.++.++.+.+.. ++-.+++-.+++.+++|++.++++||+.+++|.||||+|||+....
T Consensus 165 hiCivfellG~S~~dFlk~-N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~ 243 (415)
T KOG0671|consen 165 HICIVFELLGLSTFDFLKE-NNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFI 243 (415)
T ss_pred ceEEEEeccChhHHHHhcc-CCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCcccee
Confidence 9999999999888888765 2344689999999999999999999999999999999999983221
Q ss_pred -----CeEEEecCCCccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHH
Q psy6391 153 -----NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLF 227 (313)
Q Consensus 153 -----~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~ 227 (313)
..++++|||.++...... +..+.|.-|.|||++.+-+ ++.+.||||+||+|+|+.+|...|+..+..+.+.
T Consensus 244 r~~ks~~I~vIDFGsAtf~~e~h---s~iVsTRHYRAPEViLgLG-wS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLa 319 (415)
T KOG0671|consen 244 RPLKSTAIKVIDFGSATFDHEHH---STIVSTRHYRAPEVILGLG-WSQPCDVWSIGCILVELYTGETLFQTHENLEHLA 319 (415)
T ss_pred ccCCCcceEEEecCCcceeccCc---ceeeeccccCCchheeccC-cCCccCceeeeeEEEEeeccceecccCCcHHHHH
Confidence 128999999998765433 4456788899999998865 9999999999999999999999999998888776
Q ss_pred HHHHhcCCCCCCCCCCCCCCCCccccCCCCchh------------hhh-----hhccCCCHHHHHHHHHHhccCCCCCCC
Q psy6391 228 RIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF------------CLD-----KHVKNLDQDGLDLLEKTLIYCPATRIN 290 (313)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~-----~~~~~~~~~l~~li~~~l~~dp~~Rps 290 (313)
.+-...++.+........+..-|....-+|... |.+ ...+..-.++.+||++||..||++|+|
T Consensus 320 MMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiT 399 (415)
T KOG0671|consen 320 MMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRIT 399 (415)
T ss_pred HHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcccccc
Confidence 666666644332221111100011111111100 000 011233456899999999999999999
Q ss_pred HHHHhcCCCCCCC
Q psy6391 291 AENALKHKYFADK 303 (313)
Q Consensus 291 ~~e~l~h~~~~~~ 303 (313)
+.|+|.||||+..
T Consensus 400 l~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 400 LREALSHPFFARL 412 (415)
T ss_pred HHHHhcCHHhhcC
Confidence 9999999999974
No 318
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=5.9e-39 Score=275.35 Aligned_cols=261 Identities=23% Similarity=0.348 Sum_probs=201.7
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCC----------------cEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCc
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTG----------------ALVAIKKIRMENDDEGIPATAIREISVLKELNHPNI 75 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~----------------~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i 75 (313)
..++|++.+.||+|++|.||++.+...+ ..+++|.+...... .....+.+|+.+++.++|+|+
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD-NAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH-HHHHHHHHHHHHHHhcCCCCE
Confidence 3578999999999999999999876433 46899988755322 223577889999999999999
Q ss_pred eeeceeEEeCcEEEEEEecccc-CHHHHHhhCC--------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCE
Q psy6391 76 VQLHDTMIENYRLYLIFEFMSM-DLKKYIDTVP--------KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNL 146 (313)
Q Consensus 76 ~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~--------~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Ni 146 (313)
+++++++..++..++++|++.+ +|.+.+.... ....+++..++.++.|++.||.|||+.|++|+||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Ni 161 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNC 161 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhce
Confidence 9999999999999999999975 8887776532 122589999999999999999999999999999999999
Q ss_pred EEecCCCeEEEecCCCccccCCCC--cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh--CCCCCCCCCh
Q psy6391 147 LIDAKSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT--RKPLFQGDSE 222 (313)
Q Consensus 147 l~~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~--g~~pf~~~~~ 222 (313)
+++.++. ++|+|||.+....... .......++..|+|||.+... .++.++||||||+++|++++ +..||.....
T Consensus 162 li~~~~~-~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05051 162 LVGKNYT-IKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLG-KFTTKSDVWAFGVTLWEILTLCREQPYEHLTD 239 (296)
T ss_pred eecCCCc-eEEccccceeecccCcceeecCcCCCCceecCHHHhhcC-CCCccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence 9998876 9999999987543221 111223446789999988654 48999999999999999998 7788877665
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 223 IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
................... .+ ....++.++.+++.+||+.||++|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~------------~~---------~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 240 QQVIENAGHFFRDDGRQIY------------LP---------RPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred HHHHHHHHhcccccccccc------------CC---------CccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 5554444332111000000 00 01246789999999999999999999999964
No 319
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=7.2e-39 Score=270.96 Aligned_cols=252 Identities=21% Similarity=0.331 Sum_probs=201.3
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCc---EEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGA---LVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRL 88 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~---~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 88 (313)
..++|+..+.||+|++|.||+|..+.++. .+++|.+..... ......+.+|+.+++.++|+|++++++++.+.+..
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (268)
T cd05063 3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT-EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPA 81 (268)
T ss_pred ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC-HHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCc
Confidence 34688999999999999999999875554 689998865422 22235688899999999999999999999999999
Q ss_pred EEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 89 YLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 89 ~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
++||||+++ +|.+.+.. ....+++..+..++.|++.|+.+||+.|++|+||+|+||+++.++. ++|+|||++....
T Consensus 82 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~-~kl~dfg~~~~~~ 158 (268)
T cd05063 82 MIITEYMENGALDKYLRD--HDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLE-CKVSDFGLSRVLE 158 (268)
T ss_pred EEEEEcCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCc-EEECCCccceecc
Confidence 999999986 77777754 2345899999999999999999999999999999999999998776 9999999987653
Q ss_pred CCCcccc---cccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCC
Q psy6391 168 VPVRIYT---HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 168 ~~~~~~~---~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
....... ....+..|+|||.+... .++.++|+||+|+++|++++ |..||...........+......+..
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~----- 232 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYR-KFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAP----- 232 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcC-CcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCC-----
Confidence 3221111 11123569999988654 47899999999999999997 99999877766655555432111110
Q ss_pred CCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 244 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
..++.++.+++.+|++.+|++||++.++++
T Consensus 233 -----------------------~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 233 -----------------------MDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred -----------------------CCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 136789999999999999999999999985
No 320
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=8.7e-39 Score=273.57 Aligned_cols=261 Identities=25% Similarity=0.420 Sum_probs=205.1
Q ss_pred cceeeeeeccccceEEEEEEeC---cCCcEEEEEEecccCC--CCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNK---VTGALVAIKKIRMEND--DEGIPATAIREISVLKEL-NHPNIVQLHDTMIENYRL 88 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~---~~~~~~~~K~~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~ 88 (313)
.|++.+.||.|++|.||.+.+. .+|..|++|++..... .....+.+.+|+.+++++ +|++|+.+++.+..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4889999999999999999874 4688999999875432 222336678899999999 699999999999999999
Q ss_pred EEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 89 YLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 89 ~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
++|+||+.+ +|.+.+.. ...+++..+..++.||+.+|.+||+.|++|+||+|+||+++.++. ++|+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~-~kl~dfg~~~~~~ 156 (290)
T cd05613 81 HLILDYINGGELFTHLSQ---RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGH-VVLTDFGLSKEFH 156 (290)
T ss_pred EEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCC-EEEeeCccceecc
Confidence 999999986 77777764 345889999999999999999999999999999999999998876 9999999987653
Q ss_pred CCC-cccccccccccccchhhhcCC-CCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCC
Q psy6391 168 VPV-RIYTHEVVTLWYRAPEVLLGS-QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 245 (313)
Q Consensus 168 ~~~-~~~~~~~~~~~~~~PE~~~~~-~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
... .......++..|+|||.+... ...+.++|+||+|+++|++++|..||...........+......... .+
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~---- 231 (290)
T cd05613 157 EDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP-PY---- 231 (290)
T ss_pred cccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCC-CC----
Confidence 321 112234578889999988643 24678999999999999999999999754332222222211100000 00
Q ss_pred CCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCC-----CHHHHhcCCCCCCCC
Q psy6391 246 KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADKT 304 (313)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~e~l~h~~~~~~~ 304 (313)
+ ..+++.+.+++.+||+.||.+|| ++.+++.||||+...
T Consensus 232 ---------~-----------~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 232 ---------P-----------QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred ---------C-----------ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 0 23678999999999999999997 899999999999854
No 321
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=5.6e-39 Score=271.77 Aligned_cols=252 Identities=22% Similarity=0.356 Sum_probs=201.0
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCc---EEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGA---LVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRL 88 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~---~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 88 (313)
..++|++.+.||+|++|.||+|.+..+++ .|++|.+.... .......+..|+.+++.++||||+++++++.++...
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 2 DVSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred ChHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence 45789999999999999999999876554 59999986532 222246788999999999999999999999999999
Q ss_pred EEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 89 YLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 89 ~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
++||||+++ +|.+.+... .+.+++..++.++.|++.|+.+||++|++|+||+|+||+++.++. ++|+|||.+....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~-~kl~dfg~~~~~~ 157 (269)
T cd05065 81 MIITEFMENGALDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLV-CKVSDFGLSRFLE 157 (269)
T ss_pred EEEEecCCCCcHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCc-EEECCCccccccc
Confidence 999999986 777777653 345889999999999999999999999999999999999988766 9999999886553
Q ss_pred CCCcc--ccccc---ccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCC
Q psy6391 168 VPVRI--YTHEV---VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNW 241 (313)
Q Consensus 168 ~~~~~--~~~~~---~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
..... ..... .+..|+|||.+... .++.++|+||+|+++|++++ |..||...........+......+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~--- 233 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYR-KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPP--- 233 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccC-cccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCc---
Confidence 32111 11111 13469999988654 47899999999999999886 99999877766555544321111110
Q ss_pred CCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 242 PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
..++.++.+++.+||+.+|++||++.++++
T Consensus 234 -------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 234 -------------------------MDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred -------------------------ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 246789999999999999999999999986
No 322
>KOG1035|consensus
Probab=100.00 E-value=3e-40 Score=306.59 Aligned_cols=260 Identities=29% Similarity=0.493 Sum_probs=200.9
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC-----
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN----- 85 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 85 (313)
.-..+|+.++.||+||||.||+++++-+|+.||||++.... ......++.+|+..+.+++|||||+++..+...
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 35678999999999999999999999999999999998776 555568899999999999999999988754210
Q ss_pred --------------------------------------------------------------------------------
Q psy6391 86 -------------------------------------------------------------------------------- 85 (313)
Q Consensus 86 -------------------------------------------------------------------------------- 85 (313)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred ----------------------------------cEEEEEEeccccCHHHHHhhCCCCCCC-CHHHHHHHHHHHHHHHHH
Q psy6391 86 ----------------------------------YRLYLIFEFMSMDLKKYIDTVPKGQFL-AADKVKSITYQIFQAILF 130 (313)
Q Consensus 86 ----------------------------------~~~~lv~e~~~~~l~~~~~~~~~~~~l-~~~~~~~~~~~i~~~l~~ 130 (313)
..+||-||||..++...+-..+ ... ....+|+++++|++||.|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N--~~~~~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRN--HFNSQRDEAWRLFREILEGLAY 712 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhc--ccchhhHHHHHHHHHHHHHHHH
Confidence 0156778888875554444322 112 477899999999999999
Q ss_pred HHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc------------------CCCCcccccccccccccchhhhcCCC
Q psy6391 131 CHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF------------------GVPVRIYTHEVVTLWYRAPEVLLGSQ 192 (313)
Q Consensus 131 Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~------------------~~~~~~~~~~~~~~~~~~PE~~~~~~ 192 (313)
+|++|++|+||||.||+++..++ +||+|||+++.. +.+....+..+||.-|+|||++.+..
T Consensus 713 IH~~giIHRDLKP~NIFLd~~~~-VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 713 IHDQGIIHRDLKPRNIFLDSRNS-VKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred HHhCceeeccCCcceeEEcCCCC-eeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 99999999999999999998877 999999999872 11222445568899999999997665
Q ss_pred --CCCcchhHhHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCC
Q psy6391 193 --RYSCPVDVWSIGCIFAEIATRKPLFQGDSE-IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL 269 (313)
Q Consensus 193 --~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (313)
.++.+.|+||||+++++|+. ||...-. ...+....+.. .|.++.+. ..-
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~-iP~~~~f~------------------------~~~ 843 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGS-IPEPADFF------------------------DPE 843 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCC-CCCCcccc------------------------ccc
Confidence 69999999999999999995 4665422 22233332221 11111111 112
Q ss_pred CHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 270 DQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 270 ~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
-+.-..+|+.|++.||++||||.|+|.+.||--
T Consensus 844 ~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp 876 (1351)
T KOG1035|consen 844 HPEEASLIRWLLSHDPSKRPTATELLNSELLPP 876 (1351)
T ss_pred chHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence 356678999999999999999999999999974
No 323
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=7.5e-39 Score=284.08 Aligned_cols=264 Identities=22% Similarity=0.322 Sum_probs=206.3
Q ss_pred CCCchhhhhhccceeeeeeccccceEEEEEEeC-----cCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcC-CCCcee
Q psy6391 4 KATDDVKSRLEDYEKVEKIGEGTYGVVYKAKNK-----VTGALVAIKKIRMENDDEGIPATAIREISVLKELN-HPNIVQ 77 (313)
Q Consensus 4 ~~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~ 77 (313)
.....+....++|.+.+.||+|+||.||+|++. .+++.||+|+++...... ..+.+.+|+.++.++. ||||++
T Consensus 27 ~~~~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~-~~~~~~~E~~~l~~l~~H~niv~ 105 (401)
T cd05107 27 PYDSAWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSS-EKQALMSELKIMSHLGPHLNIVN 105 (401)
T ss_pred CCCCcceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChh-HHHHHHHHHHHHHhcCCCCCeEE
Confidence 444557777889999999999999999999864 345689999997543222 2356889999999997 999999
Q ss_pred eceeEEeCcEEEEEEecccc-CHHHHHhhCC-------------------------------------------------
Q psy6391 78 LHDTMIENYRLYLIFEFMSM-DLKKYIDTVP------------------------------------------------- 107 (313)
Q Consensus 78 ~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~------------------------------------------------- 107 (313)
+++++...+..++|+||+++ +|.+++....
T Consensus 106 ~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (401)
T cd05107 106 LLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDE 185 (401)
T ss_pred EEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcc
Confidence 99999999999999999985 8888775421
Q ss_pred ----------------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccC
Q psy6391 108 ----------------------------------------------KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDL 141 (313)
Q Consensus 108 ----------------------------------------------~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di 141 (313)
....++...+..++.||+.||.|||+.|++|+||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdl 265 (401)
T cd05107 186 SADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDL 265 (401)
T ss_pred ccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccC
Confidence 1123567788899999999999999999999999
Q ss_pred CCCCEEEecCCCeEEEecCCCccccCCCCc--ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCC
Q psy6391 142 KPQNLLIDAKSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQ 218 (313)
Q Consensus 142 ~~~Nil~~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~ 218 (313)
||+||+++.++. ++|+|||++........ ......++..|+|||.+.... ++.++|+||+|+++|++++ |..||.
T Consensus 266 kp~NiLl~~~~~-~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGvil~e~l~~g~~P~~ 343 (401)
T cd05107 266 AARNVLICEGKL-VKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNL-YTTLSDVWSFGILLWEIFTLGGTPYP 343 (401)
T ss_pred CcceEEEeCCCE-EEEEecCcceecccccccccCCCcCCCCceeChHHhcCCC-CCcHhHHHHHHHHHHHHHHcCCCCCC
Confidence 999999988765 99999999875432211 112234577899999987644 7899999999999999998 889998
Q ss_pred CCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 219 GDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
.....+...........+.. + ..++.++.+++.+||+.+|.+||++++++..
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~----------------p-----------~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 344 ELPMNEQFYNAIKRGYRMAK----------------P-----------AHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred CCCchHHHHHHHHcCCCCCC----------------C-----------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 76555544443332111110 0 2367899999999999999999999999863
No 324
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1e-38 Score=271.66 Aligned_cols=251 Identities=21% Similarity=0.266 Sum_probs=194.6
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCc----EEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGA----LVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYR 87 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~----~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 87 (313)
..++|++.+.||+|++|.||+|.+..+++ .+++|.+..... ......+..|+..++.++||||+++++++.. ..
T Consensus 5 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~ 82 (279)
T cd05111 5 KETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSG-RQTFQEITDHMLAMGSLDHAYIVRLLGICPG-AS 82 (279)
T ss_pred CHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccc-hHHHHHHHHHHHHHhcCCCCCcceEEEEECC-Cc
Confidence 34789999999999999999999876665 467777643221 1223566778888999999999999998764 45
Q ss_pred EEEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 88 LYLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 88 ~~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
.++++|++. |+|.+.+... ...+++..+..++.||+.||.|||++|++|+||||+||+++.++. ++|+|||.+...
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~-~kl~Dfg~~~~~ 159 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQH--RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSI-VQIADFGVADLL 159 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCc-EEEcCCccceec
Confidence 678899987 5888888652 345899999999999999999999999999999999999998766 999999999765
Q ss_pred CCCCc--ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCC
Q psy6391 167 GVPVR--IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 167 ~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
..... ......++..|+|||.+... .++.++|+||||+++|++++ |..||...........+......+. .
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~-~---- 233 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFG-RYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQ-P---- 233 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccC-CcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCC-C----
Confidence 32211 12233456789999988654 48999999999999999998 9999987766544333322111110 0
Q ss_pred CCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 244 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...+.++.+++.+|+..||.+|||+.|+++
T Consensus 234 -----------------------~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 234 -----------------------QICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred -----------------------CCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 124578899999999999999999999977
No 325
>KOG0986|consensus
Probab=100.00 E-value=1.8e-40 Score=279.86 Aligned_cols=265 Identities=25% Similarity=0.386 Sum_probs=216.1
Q ss_pred hhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccC-CCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcE
Q psy6391 9 VKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEN-DDEGIPATAIREISVLKELNHPNIVQLHDTMIENYR 87 (313)
Q Consensus 9 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 87 (313)
.+...+.|++-+.||+|+||.|+.++-+.+|+-||+|.+.+.. ....-..-.++|-.+++.++.+.||.+-..|+..+.
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~ 259 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDA 259 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCc
Confidence 4456788999999999999999999999999999999886543 111112456789999999999999999999999999
Q ss_pred EEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 88 LYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 88 ~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
+++|+..|+| +|.-.+....+ ..+++..+.-.+.+|+.+|.+||+.+||++|+||+|||+|..|+ ++|+|+|+|...
T Consensus 260 LClVLtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~Gh-vRISDLGLAvei 337 (591)
T KOG0986|consen 260 LCLVLTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGH-VRISDLGLAVEI 337 (591)
T ss_pred eEEEEEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCC-eEeeccceEEec
Confidence 9999999987 55544443332 35899999999999999999999999999999999999999998 999999999988
Q ss_pred CCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 167 GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
....... ..+||.+|||||++.+.. ++.+.|-|||||++|+|+.|+.||.....-...+.+-+....- +..+
T Consensus 338 ~~g~~~~-~rvGT~GYMAPEvl~ne~-Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~-~~ey----- 409 (591)
T KOG0986|consen 338 PEGKPIR-GRVGTVGYMAPEVLQNEV-YDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED-PEEY----- 409 (591)
T ss_pred CCCCccc-cccCcccccCHHHHcCCc-ccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc-hhhc-----
Confidence 6554443 348999999999997765 9999999999999999999999998654433332222211100 0000
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCC-----CHHHHhcCCCCCC
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFAD 302 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~e~l~h~~~~~ 302 (313)
...+|+++.++.+.+|..||.+|. .++++.+||||++
T Consensus 410 -------------------~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~ 451 (591)
T KOG0986|consen 410 -------------------SDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKD 451 (591)
T ss_pred -------------------ccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCccccc
Confidence 035899999999999999999998 6779999999998
No 326
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=8e-39 Score=273.81 Aligned_cols=251 Identities=22% Similarity=0.339 Sum_probs=197.4
Q ss_pred cceeeeeeccccceEEEEEEeCc-----CCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKV-----TGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLY 89 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 89 (313)
+|++.+.||+|++|.||+|.+.. ....+++|.+....... ....+.+|+.+++.++||||+++++.+..++..+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSS-ELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHH-HHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE
Confidence 57899999999999999998742 23568888876443221 1356888999999999999999999999999999
Q ss_pred EEEecccc-CHHHHHhhCC---------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEE
Q psy6391 90 LIFEFMSM-DLKKYIDTVP---------------------KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLL 147 (313)
Q Consensus 90 lv~e~~~~-~l~~~~~~~~---------------------~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil 147 (313)
+++||+.+ +|.+++.... ....+++..+..++.|++.+|.|||+.|++|+||+|+||+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nil 159 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVL 159 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEE
Confidence 99999984 8888775421 1235789999999999999999999999999999999999
Q ss_pred EecCCCeEEEecCCCccccCCCCc--ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHH
Q psy6391 148 IDAKSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEID 224 (313)
Q Consensus 148 ~~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~ 224 (313)
++.++. ++|+|||.+........ ......++..|+|||.+.+. ..+.++||||||+++++|++ |..||.......
T Consensus 160 l~~~~~-~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~ 237 (290)
T cd05045 160 VAEGRK-MKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDH-IYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER 237 (290)
T ss_pred EcCCCc-EEeccccccccccCccchhcccCCCCCccccCHHHHccC-CcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 988766 99999999875432211 11222345679999988654 48899999999999999998 999998776655
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 225 QLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...........+. ...++.++.+++.+||+.+|.+||++.++++
T Consensus 238 ~~~~~~~~~~~~~----------------------------~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 238 LFNLLKTGYRMER----------------------------PENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHHHhCCCCCCC----------------------------CCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 4443322111100 0246789999999999999999999999975
No 327
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.3e-38 Score=267.68 Aligned_cols=242 Identities=24% Similarity=0.348 Sum_probs=190.3
Q ss_pred eeccccceEEEEEEeC--cCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc-
Q psy6391 21 KIGEGTYGVVYKAKNK--VTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM- 97 (313)
Q Consensus 21 ~lg~g~~~~v~~~~~~--~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~- 97 (313)
.||+|++|.||.|.+. .++..+++|++..... ....+.+.+|+.+++.++|+||+++++.+.. +..++||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~-~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE-KSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccC-hHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCC
Confidence 4899999999999764 3455799999865432 2234568899999999999999999998864 478899999975
Q ss_pred CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccc---c
Q psy6391 98 DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIY---T 174 (313)
Q Consensus 98 ~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~---~ 174 (313)
+|.+.+... ...+++..+..++.||+.+|.+||++|++|+||||+||+++.++. ++|+|||.+.......... .
T Consensus 80 ~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~-~kl~dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05115 80 PLNKFLSGK--KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHY-AKISDFGLSKALGADDSYYKARS 156 (257)
T ss_pred CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCc-EEeccCCccccccCCccceeccC
Confidence 787777642 345899999999999999999999999999999999999988876 9999999987554332211 1
Q ss_pred cccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcccc
Q psy6391 175 HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT 253 (313)
Q Consensus 175 ~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (313)
...++..|+|||.+... ..+.++|+||||+++|++++ |..||......+....+........+
T Consensus 157 ~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------- 220 (257)
T cd05115 157 AGKWPLKWYAPECINFR-KFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCP--------------- 220 (257)
T ss_pred CCCCCcccCCHHHHccC-CCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCC---------------
Confidence 11224679999988654 47899999999999999996 99999887766555444332111100
Q ss_pred CCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 254 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...++++.++|.+||+.||++||++.++++
T Consensus 221 -------------~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 221 -------------AECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred -------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 246799999999999999999999999865
No 328
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1e-38 Score=267.33 Aligned_cols=243 Identities=25% Similarity=0.403 Sum_probs=195.5
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc-C
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM-D 98 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~-~ 98 (313)
++||.|++|.||++.+.. ++.+++|.+...... .....+.+|+.+++.++|++|+++++++.+....++|+|++.+ +
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 78 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGS 78 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence 468999999999999886 899999988765433 2346788999999999999999999999999999999999975 7
Q ss_pred HHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccc--cc
Q psy6391 99 LKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYT--HE 176 (313)
Q Consensus 99 l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~--~~ 176 (313)
|.+.+... ...++...+..++.+++.++.+||++|++|+||+|+||+++.++. ++|+|||.+........... ..
T Consensus 79 l~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~-~~l~d~g~~~~~~~~~~~~~~~~~ 155 (251)
T cd05041 79 LLTFLRKK--KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNV-LKISDFGMSREEEGGIYTVSDGLK 155 (251)
T ss_pred HHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCc-EEEeeccccccccCCcceeccccC
Confidence 87777652 335789999999999999999999999999999999999998876 99999999876542211111 11
Q ss_pred cccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCC
Q psy6391 177 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFP 255 (313)
Q Consensus 177 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (313)
..+..|+|||.+.+. .++.++|+||||+++|++++ |..||..................+..
T Consensus 156 ~~~~~y~~PE~~~~~-~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~----------------- 217 (251)
T cd05041 156 QIPIKWTAPEALNYG-RYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAP----------------- 217 (251)
T ss_pred cceeccCChHhhccC-CCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCC-----------------
Confidence 224569999988654 48999999999999999998 88999877665544444322111100
Q ss_pred CCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 256 EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 256 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
..++.++.+++.+||+.+|.+||++.|+++
T Consensus 218 -----------~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 218 -----------QLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred -----------ccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 136789999999999999999999999985
No 329
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-38 Score=275.28 Aligned_cols=257 Identities=23% Similarity=0.345 Sum_probs=201.6
Q ss_pred hhhhhccceeeeeeccccceEEEEEEeC-------cCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeece
Q psy6391 9 VKSRLEDYEKVEKIGEGTYGVVYKAKNK-------VTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHD 80 (313)
Q Consensus 9 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~-------~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~ 80 (313)
+....++|.+.+.||+|++|.||++.+. .....+++|.++.... ......+.+|+.+++.+ +||||+++++
T Consensus 7 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (314)
T cd05099 7 WEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT-DKDLADLISEMELMKLIGKHKNIINLLG 85 (314)
T ss_pred ccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCCeeeEEE
Confidence 4445579999999999999999999753 2345689998865432 22235678899999999 6999999999
Q ss_pred eEEeCcEEEEEEecccc-CHHHHHhhCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCE
Q psy6391 81 TMIENYRLYLIFEFMSM-DLKKYIDTVP-------------KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNL 146 (313)
Q Consensus 81 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~-------------~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Ni 146 (313)
++.+.+.+++++||+.+ +|.+++.... ....+++..+..++.||+.||.|||++|++|+||||+||
T Consensus 86 ~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni 165 (314)
T cd05099 86 VCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNV 165 (314)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeE
Confidence 99999999999999975 8888886532 124588999999999999999999999999999999999
Q ss_pred EEecCCCeEEEecCCCccccCCCCcc--cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChH
Q psy6391 147 LIDAKSNIVKVADFGLARAFGVPVRI--YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEI 223 (313)
Q Consensus 147 l~~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~ 223 (313)
+++.++. ++|+|||.+......... .....++..|+|||.+.+. .++.++|+||||+++|++++ |..||......
T Consensus 166 ll~~~~~-~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~ 243 (314)
T cd05099 166 LVTEDNV-MKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDR-VYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE 243 (314)
T ss_pred EEcCCCc-EEEccccccccccccccccccccCCCCccccCHHHHccC-CcCccchhhHHHHHHHHHHhCCCCCCCCCCHH
Confidence 9998876 999999999765322111 1112234579999988654 48899999999999999999 89999877665
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 224 DQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
.....+........ ...++.++.+++.+||+.||++|||+.++++
T Consensus 244 ~~~~~~~~~~~~~~----------------------------~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 244 ELFKLLREGHRMDK----------------------------PSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHHHHcCCCCCC----------------------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 55554432110000 0246789999999999999999999999886
No 330
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.1e-38 Score=273.57 Aligned_cols=260 Identities=20% Similarity=0.302 Sum_probs=198.7
Q ss_pred hccceeeeeeccccceEEEEEEeCcC--------------CcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceee
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVT--------------GALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQL 78 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~--------------~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 78 (313)
.++|++.+.||+|++|.||++.+..+ ...|++|.+..... ......+.+|++++++++|++++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT-KTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 35899999999999999999987532 23589998875422 2223568889999999999999999
Q ss_pred ceeEEeCcEEEEEEecccc-CHHHHHhhCC---------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEE
Q psy6391 79 HDTMIENYRLYLIFEFMSM-DLKKYIDTVP---------KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLI 148 (313)
Q Consensus 79 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~---------~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~ 148 (313)
++++...+..++||||+.+ +|.+.+.... ....+++..+..++.|++.||.|||+.|++|+||||+||++
T Consensus 83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill 162 (295)
T cd05097 83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV 162 (295)
T ss_pred EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEE
Confidence 9999999999999999985 8877775421 11236888999999999999999999999999999999999
Q ss_pred ecCCCeEEEecCCCccccCCCCc--ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh--CCCCCCCCChHH
Q psy6391 149 DAKSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT--RKPLFQGDSEID 224 (313)
Q Consensus 149 ~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~--g~~pf~~~~~~~ 224 (313)
+.++. ++|+|||++........ ......++..|+|||.+.... ++.++|+||||+++|+|++ +..||.......
T Consensus 163 ~~~~~-~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~ 240 (295)
T cd05097 163 GNHYT-IKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGK-FTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ 240 (295)
T ss_pred cCCCc-EEecccccccccccCcceeccCcCcCceeecChhhhccCC-cCchhhHHHHHHHHHHHHHcCCCCCCcccChHH
Confidence 98776 99999999875432211 112223466799999886544 8999999999999999988 678888776655
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 225 QLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
.................. ...+.+++.+.+|+.+|++.||++||++.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 241 VIENTGEFFRNQGRQIYL---------------------SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHHhhhhccccccC---------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 554433211110000000 001236789999999999999999999999964
No 331
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.7e-38 Score=267.02 Aligned_cols=245 Identities=24% Similarity=0.345 Sum_probs=197.4
Q ss_pred eeeccccceEEEEEEeCc-CC--cEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEeccc
Q psy6391 20 EKIGEGTYGVVYKAKNKV-TG--ALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMS 96 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~-~~--~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 96 (313)
+.||.|++|.||+|.+.. ++ ..+++|.+...... .....+.+|+.++++++|+||+++++++.+ ...++++||+.
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecC
Confidence 468999999999998754 33 36899998776543 345678899999999999999999999988 89999999997
Q ss_pred -cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc---
Q psy6391 97 -MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI--- 172 (313)
Q Consensus 97 -~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~--- 172 (313)
++|.+.+..... ..+++..++.++.|++.||.+||+.|++|+||+|+||+++.++. ++|+|||++.........
T Consensus 79 ~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~-~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 79 LGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDK-VKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred CCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCE-EEeccccccccccccccceec
Confidence 588888776432 46899999999999999999999999999999999999999876 999999998776432211
Q ss_pred cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcc
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK 251 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (313)
.....++..|+|||.+.+.. ++.++|+||||+++|+|++ |+.||......+....+........ .
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~---------- 222 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRT-FSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLE---R---------- 222 (257)
T ss_pred ccCCCCCceecCHHHhcccC-cCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCC---C----------
Confidence 11234567899999876544 8899999999999999998 9999987777665555443111000 0
Q ss_pred ccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 252 TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...+|..+.+++.+|++.+|++||++.++++
T Consensus 223 --------------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 223 --------------PEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred --------------CccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 0136789999999999999999999999975
No 332
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.3e-38 Score=271.06 Aligned_cols=255 Identities=21% Similarity=0.294 Sum_probs=201.5
Q ss_pred hhhccceeeeeeccccceEEEEEEeCc----CCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEe-C
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKV----TGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIE-N 85 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~----~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~ 85 (313)
...++|++.+.||+|++|.||.|.+.. ++..+++|++.... .......+.+|+.+++.++|+|++++++++.. +
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 81 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA-SEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG 81 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 456789999999999999999999875 25789999876432 22223667889999999999999999998776 4
Q ss_pred cEEEEEEeccc-cCHHHHHhhCCCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEec
Q psy6391 86 YRLYLIFEFMS-MDLKKYIDTVPKG-----QFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVAD 159 (313)
Q Consensus 86 ~~~~lv~e~~~-~~l~~~~~~~~~~-----~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~d 159 (313)
...+++++++. ++|.+.+...... ..+++..++.++.||+.||.|||+.+++|+||+|+||+++.++. ++|+|
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~-~kl~d 160 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQ-VKITD 160 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCc-EEECC
Confidence 67889999987 5888887654322 45899999999999999999999999999999999999988866 99999
Q ss_pred CCCccccCCCCc--ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCC
Q psy6391 160 FGLARAFGVPVR--IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTP 236 (313)
Q Consensus 160 f~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~ 236 (313)
||++........ ......++..|+|||.+.+.. ++.++||||||+++|++++ |+.||...+..+.......... +
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~ 238 (280)
T cd05043 161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKE-YSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYR-L 238 (280)
T ss_pred CCCcccccCCceEEeCCCCCcchhccCHHHHhcCC-CCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCC-C
Confidence 999875432211 111223466799999886644 7899999999999999999 9999988766554443332111 0
Q ss_pred CCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 237 TEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
.. ...+++++.+++.+||+.||++|||+.++++
T Consensus 239 ~~---------------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 239 AQ---------------------------PINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred CC---------------------------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 00 0136789999999999999999999999985
No 333
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.4e-38 Score=269.40 Aligned_cols=253 Identities=28% Similarity=0.531 Sum_probs=204.2
Q ss_pred cceeeeeeccccceEEEEEEeCc-CCcEEEEEEecccCCC--------CCCchhHHHHHHHHhh-cCCCCceeeceeEEe
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKV-TGALVAIKKIRMENDD--------EGIPATAIREISVLKE-LNHPNIVQLHDTMIE 84 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~~K~~~~~~~~--------~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~ 84 (313)
.|++.+.||+|++|.||.+.+.. .++.+++|.+...... ......+.+|+.++.. ++|+|++++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48899999999999999999886 6788999988643211 1122446678887765 699999999999999
Q ss_pred CcEEEEEEecccc-CHHHHHhhC-CCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCCEEEecCCCeEEEecCC
Q psy6391 85 NYRLYLIFEFMSM-DLKKYIDTV-PKGQFLAADKVKSITYQIFQAILFCHK-RRVLHRDLKPQNLLIDAKSNIVKVADFG 161 (313)
Q Consensus 85 ~~~~~lv~e~~~~-~l~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~Lh~-~~i~H~di~~~Nil~~~~~~~~~l~df~ 161 (313)
++..+++|||+.+ +|.+.+... .....+++..++.++.|++.+|.+||+ .|++|+||+|+||+++.++. ++|+|||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~-~~l~dfg 159 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDK-VTITDFG 159 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCc-EEEeccc
Confidence 9999999999986 887777543 234568999999999999999999996 78999999999999998877 9999999
Q ss_pred CccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCC
Q psy6391 162 LARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNW 241 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
.+....... ......++..|++||.+.+.. ++.++|+||||+++|++++|+.||..................+...
T Consensus 160 ~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~-~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-- 235 (269)
T cd08528 160 LAKQKQPES-KLTSVVGTILYSCPEIVKNEP-YGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPE-- 235 (269)
T ss_pred ceeeccccc-ccccccCcccCcChhhhcCCC-CchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCc--
Confidence 997765433 334456788899999987644 7999999999999999999999998877766655554432221111
Q ss_pred CCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 242 PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
..+++++.++|.+||+.||++||++.|+.++
T Consensus 236 -------------------------~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 236 -------------------------GMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred -------------------------ccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 1367899999999999999999999998764
No 334
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.6e-38 Score=273.75 Aligned_cols=259 Identities=23% Similarity=0.347 Sum_probs=204.9
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeC-------cCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeec
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNK-------VTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLH 79 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~-------~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~ 79 (313)
++....++|.+.+.||+|++|.||.+++. .++..+++|.+..... ......+.+|+.+++.+ +||||++++
T Consensus 9 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~ 87 (304)
T cd05101 9 RWEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLL 87 (304)
T ss_pred cccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc-hHHHHHHHHHHHHHHhhccCCCchhee
Confidence 46677899999999999999999999752 2345789998864322 22236788999999999 899999999
Q ss_pred eeEEeCcEEEEEEecccc-CHHHHHhhCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCC
Q psy6391 80 DTMIENYRLYLIFEFMSM-DLKKYIDTVPK-------------GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQN 145 (313)
Q Consensus 80 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~-------------~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~N 145 (313)
+.+...+..+++|||+++ +|.+++..... ...++...+..++.||+.||.|||+.|++|+||||+|
T Consensus 88 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~N 167 (304)
T cd05101 88 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARN 167 (304)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccce
Confidence 999999999999999975 88888765321 2347888899999999999999999999999999999
Q ss_pred EEEecCCCeEEEecCCCccccCCCCcc--cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCCh
Q psy6391 146 LLIDAKSNIVKVADFGLARAFGVPVRI--YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSE 222 (313)
Q Consensus 146 il~~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~ 222 (313)
|+++.++. ++|+|||.+......... .....++..|+|||.+.+. .++.++||||||+++|++++ |..||.....
T Consensus 168 ili~~~~~-~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 245 (304)
T cd05101 168 VLVTENNV-MKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 245 (304)
T ss_pred EEEcCCCc-EEECCCccceecccccccccccCCCCCceeeCchhhccC-CCCchhhHHHHHHHHHHHHcCCCCCcccCCH
Confidence 99988776 999999998765432211 1122345679999988664 47899999999999999998 8889987766
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 223 IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
.+....+........ ...++.++.+|+.+||+.+|.+||++.++++.
T Consensus 246 ~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 246 EELFKLLKEGHRMDK----------------------------PANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHHHHHHcCCcCCC----------------------------CCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 665555432111000 02467999999999999999999999999863
No 335
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.2e-38 Score=272.39 Aligned_cols=254 Identities=24% Similarity=0.408 Sum_probs=200.6
Q ss_pred hhccceeeeeeccccceEEEEEEeC-----cCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNK-----VTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENY 86 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 86 (313)
..++|++.+.||.|++|.||++.+. .++..+++|.+..... ......+.+|+.+++.++||+++++++++.+++
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC-HHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 3578999999999999999999874 2567899998865432 122356888999999999999999999999999
Q ss_pred EEEEEEecccc-CHHHHHhhCCC-------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCE
Q psy6391 87 RLYLIFEFMSM-DLKKYIDTVPK-------------------GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNL 146 (313)
Q Consensus 87 ~~~lv~e~~~~-~l~~~~~~~~~-------------------~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Ni 146 (313)
..++++||+++ +|.+.+..... ...+++..++.++.||+.+|.+||+.|++|+||+|+||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ni 161 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNC 161 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhhe
Confidence 99999999985 88888764211 12478889999999999999999999999999999999
Q ss_pred EEecCCCeEEEecCCCccccCCCC--cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChH
Q psy6391 147 LIDAKSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEI 223 (313)
Q Consensus 147 l~~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~ 223 (313)
+++.++. ++|+|||.+....... ........+..|+|||.+.+. .++.++|+||||+++|+|++ |..||......
T Consensus 162 l~~~~~~-~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~ 239 (288)
T cd05050 162 LVGENMV-VKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYN-RYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE 239 (288)
T ss_pred EecCCCc-eEECccccceecccCccccccCCCccChhhcCHHHHhcC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 9998877 9999999987543221 111222345679999988654 48899999999999999997 88899876665
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 224 DQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
+....+......+. ...++.++.+|+.+||+.||.+|||+.|++.
T Consensus 240 ~~~~~~~~~~~~~~----------------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 240 EVIYYVRDGNVLSC----------------------------PDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHHHhcCCCCCC----------------------------CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 55444332111100 0136789999999999999999999999874
No 336
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.3e-38 Score=269.48 Aligned_cols=251 Identities=25% Similarity=0.382 Sum_probs=199.7
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCc----EEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGA----LVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYR 87 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~----~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 87 (313)
...+|++.+.||+|++|.||+|.++.++. .+++|....... ......+.+|+.+++.++|+|++++++++.. ..
T Consensus 5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~ 82 (279)
T cd05057 5 KETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQ 82 (279)
T ss_pred CHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cc
Confidence 34789999999999999999999865554 588888765532 2223567889999999999999999999987 68
Q ss_pred EEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 88 LYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 88 ~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
.++++||+.+ +|.+.+... ...+++..+..++.||+.|+.|||+.|++|+||+|+||+++.++. ++|+|||.+...
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~-~kL~dfg~~~~~ 159 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNH--KDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQH-VKITDFGLAKLL 159 (279)
T ss_pred eEEEEecCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCe-EEECCCcccccc
Confidence 8999999974 888877652 334899999999999999999999999999999999999988776 999999999766
Q ss_pred CCCCcccc--cccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCC
Q psy6391 167 GVPVRIYT--HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 167 ~~~~~~~~--~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
........ ...++..|+|||.+... .++.++|+||+|+++|++++ |..||......+....+......+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----- 233 (279)
T cd05057 160 DVDEKEYHAEGGKVPIKWMALESILHR-IYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQP----- 233 (279)
T ss_pred cCcccceecCCCcccccccCHHHhhcC-CcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCC-----
Confidence 43222111 11224579999988653 47899999999999999998 99999987766655544432111111
Q ss_pred CCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 244 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...+..+.+++.+||..||++||++.++++
T Consensus 234 -----------------------~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 234 -----------------------PICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred -----------------------CCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 125688999999999999999999999875
No 337
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2.5e-38 Score=265.90 Aligned_cols=249 Identities=27% Similarity=0.411 Sum_probs=202.2
Q ss_pred ceeeeeeccccceEEEEEEeCcCC----cEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 16 YEKVEKIGEGTYGVVYKAKNKVTG----ALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 16 y~~~~~lg~g~~~~v~~~~~~~~~----~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
+++.+.||.|++|.||++.+...+ ..+++|++....... ....+.+|+.+++.++|++++++++.+.+.+..+++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i 79 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ-QIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIV 79 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH-HHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEE
Confidence 457889999999999999988655 889999986554321 346788999999999999999999999999999999
Q ss_pred Eecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCC
Q psy6391 92 FEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV 170 (313)
Q Consensus 92 ~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~ 170 (313)
||++.+ +|.+.+..... ..+++..+..++.|++.++.+||+.|++|+||+|+||+++.++. ++|+|||.+.......
T Consensus 80 ~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~-~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 80 MEYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLV-VKISDFGLSRDLYDDD 157 (258)
T ss_pred EeccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCe-EEEcccCCceeccccc
Confidence 999975 88888765322 22899999999999999999999999999999999999998876 9999999997664331
Q ss_pred cccc-cccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy6391 171 RIYT-HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 248 (313)
Q Consensus 171 ~~~~-~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
.... ...++..|+|||.+.. ...+.++|+||+|+++++|++ |..||..................+..
T Consensus 158 ~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------- 226 (258)
T smart00219 158 YYKKKGGKLPIRWMAPESLKD-GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKP---------- 226 (258)
T ss_pred ccccccCCCcccccChHHhcc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCC----------
Confidence 1111 1225678999998854 458999999999999999998 88999887666666555432211110
Q ss_pred CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 249 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
..++.++.+++.+|++.||++|||+.++++
T Consensus 227 ------------------~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 227 ------------------ENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred ------------------CcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 136799999999999999999999999986
No 338
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.6e-38 Score=277.31 Aligned_cols=260 Identities=22% Similarity=0.335 Sum_probs=203.6
Q ss_pred chhhhhhccceeeeeeccccceEEEEEEeCcC-------CcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceee
Q psy6391 7 DDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVT-------GALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQL 78 (313)
Q Consensus 7 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~-------~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~ 78 (313)
.++...-.+|++.+.||+|+||.||.+.+... +..+++|.+...... .....+.+|+.+++++ +|+||+++
T Consensus 5 ~~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~~iv~~ 83 (334)
T cd05100 5 PKWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATD-KDLSDLVSEMEMMKMIGKHKNIINL 83 (334)
T ss_pred cccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCH-HHHHHHHHHHHHHHhhcCCCCeeee
Confidence 34555567899999999999999999986421 236899987643222 2235788899999999 79999999
Q ss_pred ceeEEeCcEEEEEEecccc-CHHHHHhhCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCC
Q psy6391 79 HDTMIENYRLYLIFEFMSM-DLKKYIDTVP-------------KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQ 144 (313)
Q Consensus 79 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~-------------~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~ 144 (313)
++++..++..++++||+++ +|.+++.... ....++...+..++.||+.||.|||++|++|+||+|+
T Consensus 84 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~ 163 (334)
T cd05100 84 LGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAAR 163 (334)
T ss_pred eEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccc
Confidence 9999999999999999975 8888876532 1234778889999999999999999999999999999
Q ss_pred CEEEecCCCeEEEecCCCccccCCCCcc--cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCC
Q psy6391 145 NLLIDAKSNIVKVADFGLARAFGVPVRI--YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDS 221 (313)
Q Consensus 145 Nil~~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~ 221 (313)
||+++.++. ++|+|||++......... .....++..|+|||.+... .++.++||||||+++|+|++ |..||....
T Consensus 164 Nill~~~~~-~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~~g~~p~~~~~ 241 (334)
T cd05100 164 NVLVTEDNV-MKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLLWEIFTLGGSPYPGIP 241 (334)
T ss_pred eEEEcCCCc-EEECCcccceecccccccccccCCCcCceEcCHHHhccC-CcCchhhhHHHHHHHHHHHhcCCCCCCCCC
Confidence 999998876 999999998765432111 1112234679999988664 47889999999999999998 889998877
Q ss_pred hHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 222 EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
..+....+........ ...++.++.+++.+||+.+|++||++.+++++
T Consensus 242 ~~~~~~~~~~~~~~~~----------------------------~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 242 VEELFKLLKEGHRMDK----------------------------PANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHHHHHHHcCCCCCC----------------------------CCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 6665554433211110 02467899999999999999999999999984
No 339
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4.6e-39 Score=270.71 Aligned_cols=240 Identities=17% Similarity=0.251 Sum_probs=188.3
Q ss_pred eeeccccceEEEEEEeCcCCc-------EEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGA-------LVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~-------~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
+.||.|+||.||+|.+...+. .+++|.+.... ....+.+.+|+.+++.++|||++++++++..++..++||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 78 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ 78 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence 468999999999998865443 37778775432 222356788999999999999999999999999999999
Q ss_pred ecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCe-------EEEecCCCcc
Q psy6391 93 EFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNI-------VKVADFGLAR 164 (313)
Q Consensus 93 e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~-------~~l~df~~~~ 164 (313)
||+++ +|..++... ...+++..+..++.||+.||.|||++|++|+||||+||+++.++.. ++++|||.+.
T Consensus 79 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 79 EYVKFGSLDTYLKKN--KNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred ecCCCCcHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 99986 777777652 2358899999999999999999999999999999999999877642 6999999886
Q ss_pred ccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCC-CCCCCCChHHHHHHHHHhcCCCCCCCCCC
Q psy6391 165 AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
..... ....++..|+|||++.+...++.++|+||||+++|++++|. .||..................
T Consensus 157 ~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~-------- 224 (258)
T cd05078 157 TVLPK----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYEDRHQL-------- 224 (258)
T ss_pred ccCCc----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHccccC--------
Confidence 55332 22456778999999876555789999999999999999984 666655544433222111000
Q ss_pred CCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 244 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
+ ...+.++.+++.+||+.||.+|||++++++.
T Consensus 225 -----------~-----------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 225 -----------P-----------APKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred -----------C-----------CCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 0 1356789999999999999999999999863
No 340
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=3.2e-38 Score=267.95 Aligned_cols=255 Identities=24% Similarity=0.356 Sum_probs=201.8
Q ss_pred hccceeeeeeccccceEEEEEEeCc-----CCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKV-----TGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYR 87 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 87 (313)
.++|++++.||+|++|.||.++.+. +.+.+++|.+..... ......+.+|+.+++.++|+|++++++++.+.+.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 82 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD-ENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP 82 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc-hHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc
Confidence 4789999999999999999999653 346789998764332 2234678899999999999999999999999999
Q ss_pred EEEEEeccc-cCHHHHHhhCCCC------CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecC
Q psy6391 88 LYLIFEFMS-MDLKKYIDTVPKG------QFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADF 160 (313)
Q Consensus 88 ~~lv~e~~~-~~l~~~~~~~~~~------~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df 160 (313)
.++||||++ ++|.+++...... ..+++..+..++.||+.+|.|||+.|++|+||+|+||+++.++. ++++||
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~-~~l~~~ 161 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQRE-VKVSLL 161 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCc-EEEccc
Confidence 999999998 4888888754321 25899999999999999999999999999999999999998876 999999
Q ss_pred CCccccCCC-CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCC
Q psy6391 161 GLARAFGVP-VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTE 238 (313)
Q Consensus 161 ~~~~~~~~~-~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~ 238 (313)
|++...... ........++..|+|||.+.+.. .+.++|+||||+++|++++ |..||.....................
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 240 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDD-FSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPV 240 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCC
Confidence 988643221 11222335567799999886544 7889999999999999998 88899876655544443321110000
Q ss_pred CCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 239 DNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
...++..+.+++.+||+.+|.+||++.++++.
T Consensus 241 ---------------------------~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 241 ---------------------------PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred ---------------------------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 02477899999999999999999999999864
No 341
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3.4e-38 Score=270.73 Aligned_cols=259 Identities=21% Similarity=0.318 Sum_probs=196.8
Q ss_pred ccceeeeeeccccceEEEEEEeCc----------------CCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCcee
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKV----------------TGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQ 77 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~----------------~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 77 (313)
++|++.+.||+|++|.||.+.+.. ++..+++|++..... ......+.+|+.+++.++|+||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN-KNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcce
Confidence 579999999999999999986432 344689998865422 222357889999999999999999
Q ss_pred eceeEEeCcEEEEEEecccc-CHHHHHhhCCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEE
Q psy6391 78 LHDTMIENYRLYLIFEFMSM-DLKKYIDTVPK--------GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLI 148 (313)
Q Consensus 78 ~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~--------~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~ 148 (313)
+++++..++..+++|||+.+ +|.+++..... ...+++..+..++.||+.||.|||+.|++|+||||+||++
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili 163 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLV 163 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEE
Confidence 99999999999999999974 88888765321 2347788999999999999999999999999999999999
Q ss_pred ecCCCeEEEecCCCccccCCCCc--ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh--CCCCCCCCChHH
Q psy6391 149 DAKSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT--RKPLFQGDSEID 224 (313)
Q Consensus 149 ~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~--g~~pf~~~~~~~ 224 (313)
+.++. ++|+|||.+........ ......++..|++||..... .++.++|+||||+++|+|++ |..||.......
T Consensus 164 ~~~~~-~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 164 GKNYT-IKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLG-KFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred cCCCC-EEeccCcccccccCCcceeccCcCcCccccCCHHHHhcC-CccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 88776 99999999876532211 11122335679999987654 48999999999999999998 778998766555
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 225 QLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
............... ...+ ....+++.+.+|+.+||+.||.+||++.++++
T Consensus 242 ~~~~~~~~~~~~~~~------------~~~~---------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 242 VIENTGEFFRDQGRQ------------VYLP---------KPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHHHhhcccc------------ccCC---------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 443322110000000 0000 01246789999999999999999999999874
No 342
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=3.5e-38 Score=264.70 Aligned_cols=245 Identities=24% Similarity=0.402 Sum_probs=198.2
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEE
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYL 90 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 90 (313)
..+++|++.+.||+|++|.||.+.. +++.+++|.++... ....+.+|+.+++.++|||++++++++..+ ..++
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~ 75 (254)
T cd05083 3 LNLQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYI 75 (254)
T ss_pred ccHHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEE
Confidence 3568899999999999999999865 57789999986432 236788999999999999999999998765 4689
Q ss_pred EEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 91 IFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 91 v~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
+|||+.+ +|.+.+.... ...+++..+..++.|++.|+.+||+.|++|+||+|+||+++.++. ++|+|||.+......
T Consensus 76 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~-~kl~Dfg~~~~~~~~ 153 (254)
T cd05083 76 VMELMSKGNLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGV-AKVSDFGLARVGSMG 153 (254)
T ss_pred EEECCCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCc-EEECCCccceecccc
Confidence 9999985 8888886532 335889999999999999999999999999999999999998876 999999998754322
Q ss_pred CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy6391 170 VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 248 (313)
Q Consensus 170 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
. .....+..|+|||.+.+. .++.++|+||||+++|+|++ |..||...........+........
T Consensus 154 ~---~~~~~~~~y~~pe~~~~~-~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------- 218 (254)
T cd05083 154 V---DNSKLPVKWTAPEALKHK-KFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEP----------- 218 (254)
T ss_pred C---CCCCCCceecCHHHhccC-CcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCC-----------
Confidence 1 122335679999988654 48899999999999999997 9999987776555444432211100
Q ss_pred CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 249 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...++.++.+++.+||+.+|++||++.+++.
T Consensus 219 -----------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 219 -----------------PEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred -----------------CCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0247899999999999999999999999975
No 343
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.1e-38 Score=267.39 Aligned_cols=250 Identities=25% Similarity=0.392 Sum_probs=197.8
Q ss_pred hccceeeeeeccccceEEEEEEeCcC---CcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVT---GALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLY 89 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~---~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 89 (313)
-++|.+.+.||.|++|.||+|.+... ...+++|....... ....+.+.+|+.+++.++|+|++++++++.++ ..+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~ 82 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS-PSVREKFLQEAYIMRQFDHPHIVKLIGVITEN-PVW 82 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCchhceeEEEcCC-CcE
Confidence 46789999999999999999987533 34689998865432 22246788999999999999999999998765 567
Q ss_pred EEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCC
Q psy6391 90 LIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGV 168 (313)
Q Consensus 90 lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~ 168 (313)
+||||+.+ +|.+.+... ...+++..+..++.|++.+|.+||+.|++|+||+|+||+++.++. ++|+|||++.....
T Consensus 83 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~-~~l~d~g~~~~~~~ 159 (270)
T cd05056 83 IVMELAPLGELRSYLQVN--KYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDC-VKLGDFGLSRYLED 159 (270)
T ss_pred EEEEcCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCC-eEEccCceeeeccc
Confidence 99999974 888887653 234899999999999999999999999999999999999998876 99999999876533
Q ss_pred CCc-ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 169 PVR-IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 169 ~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
... ......++..|+|||.+... .++.++|+||||+++|++++ |+.||......+....+......+.
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~--------- 229 (270)
T cd05056 160 ESYYKASKGKLPIKWMAPESINFR-RFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPM--------- 229 (270)
T ss_pred ccceecCCCCccccccChhhhccC-CCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCC---------
Confidence 211 11122234579999988654 47899999999999999986 9999988776655544433211111
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...++.++.++|.+|+..+|.+|||+.++++
T Consensus 230 -------------------~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 230 -------------------PPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred -------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 1247899999999999999999999999886
No 344
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=4.6e-38 Score=263.29 Aligned_cols=243 Identities=22% Similarity=0.373 Sum_probs=193.1
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc-C
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM-D 98 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~-~ 98 (313)
+.||.|++|.||++... ++..+++|.+..... ......+.+|+.+++.++||||+++++++...+..++||||+++ +
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 78 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLP-QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD 78 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence 36899999999999865 678899998865432 12234678899999999999999999999999999999999975 7
Q ss_pred HHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccc-cccc
Q psy6391 99 LKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIY-THEV 177 (313)
Q Consensus 99 l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~-~~~~ 177 (313)
|.+.+... ...+++..+..++.|++.+|.+||+.|++|+||+|+||+++.++. ++|+|||++.......... ....
T Consensus 79 L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~-~~l~d~g~~~~~~~~~~~~~~~~~ 155 (250)
T cd05085 79 FLSFLRKK--KDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNV-LKISDFGMSRQEDDGIYSSSGLKQ 155 (250)
T ss_pred HHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCe-EEECCCccceeccccccccCCCCC
Confidence 77776542 234789999999999999999999999999999999999988876 9999999986543221111 1122
Q ss_pred ccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCC
Q psy6391 178 VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE 256 (313)
Q Consensus 178 ~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (313)
++..|+|||.+.+. .++.++|+||+|+++|++++ |..||...........+....... .
T Consensus 156 ~~~~y~aPE~~~~~-~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-----------------~-- 215 (250)
T cd05085 156 IPIKWTAPEALNYG-RYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMS-----------------C-- 215 (250)
T ss_pred CcccccCHHHhccC-CCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCC-----------------C--
Confidence 34569999988654 48899999999999999998 999998776655554443211100 0
Q ss_pred CchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 257 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...++..+.+++.+|++.+|++||++.++++
T Consensus 216 ---------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 216 ---------PQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred ---------CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 0246799999999999999999999999975
No 345
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.5e-38 Score=270.44 Aligned_cols=256 Identities=26% Similarity=0.411 Sum_probs=201.1
Q ss_pred cceeeeeeccccceEEEEEEeC---cCCcEEEEEEecccCC--CCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNK---VTGALVAIKKIRMEND--DEGIPATAIREISVLKEL-NHPNIVQLHDTMIENYRL 88 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~---~~~~~~~~K~~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~ 88 (313)
+|++.+.||+|++|.||+++.. .++..+++|+++.... .......+.+|+.+++++ +|++++++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4889999999999999999853 4578899999875432 222335678899999999 699999999999999999
Q ss_pred EEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 89 YLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 89 ~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
++||||+.+ +|.+.+.. ...+++..++.++.|++.+|.+||+.|++|+||+|+||+++.++. ++|+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~-~~l~dfg~~~~~~ 156 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ---REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGH-VVLTDFGLSKEFL 156 (288)
T ss_pred EEEEecCCCCcHHHHHhh---cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCC-EEEEECccccccc
Confidence 999999986 77766653 345889999999999999999999999999999999999998876 9999999886643
Q ss_pred CCCc-ccccccccccccchhhhcCCC-CCCcchhHhHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHhcCCCCCCCC
Q psy6391 168 VPVR-IYTHEVVTLWYRAPEVLLGSQ-RYSCPVDVWSIGCIFAEIATRKPLFQGDSEI----DQLFRIFRVLTTPTEDNW 241 (313)
Q Consensus 168 ~~~~-~~~~~~~~~~~~~PE~~~~~~-~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~ 241 (313)
.... ......++..|++||.+.+.. ..+.++|+||+|+++|+|++|..||...... ........ ...+.
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~---- 231 (288)
T cd05583 157 AEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK-SKPPF---- 231 (288)
T ss_pred cccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc-cCCCC----
Confidence 3221 112235688899999875532 3688999999999999999999999643321 11111111 11110
Q ss_pred CCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC---HHHHhcCCCCCCC
Q psy6391 242 PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN---AENALKHKYFADK 303 (313)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps---~~e~l~h~~~~~~ 303 (313)
...++.++.+++.+||+.||.+||| +.++|+||||+..
T Consensus 232 ------------------------~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~ 272 (288)
T cd05583 232 ------------------------PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI 272 (288)
T ss_pred ------------------------CcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence 0246789999999999999999998 5778999999873
No 346
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2e-38 Score=269.08 Aligned_cols=239 Identities=17% Similarity=0.273 Sum_probs=185.1
Q ss_pred eeccccceEEEEEEeCcC------------------------CcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCce
Q psy6391 21 KIGEGTYGVVYKAKNKVT------------------------GALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIV 76 (313)
Q Consensus 21 ~lg~g~~~~v~~~~~~~~------------------------~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~ 76 (313)
.||+|+||.||+|....+ ...+++|++..... .....+.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR--DIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH--HHHHHHHHHHHHHhcCCCCCee
Confidence 699999999999975321 23588888764332 2235678899999999999999
Q ss_pred eeceeEEeCcEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCC--
Q psy6391 77 QLHDTMIENYRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSN-- 153 (313)
Q Consensus 77 ~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~-- 153 (313)
++++++.+++..++||||+++ +|...+.. ..+.+++..+..++.||+.||.|||++|++|+||||+||+++..+.
T Consensus 80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRK--EKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eEEEEEEeCCceEEEEecCCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 999999999999999999986 66666543 2345889999999999999999999999999999999999976432
Q ss_pred ----eEEEecCCCccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHH-hCCCCCCCCChHHHHHH
Q psy6391 154 ----IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA-TRKPLFQGDSEIDQLFR 228 (313)
Q Consensus 154 ----~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll-~g~~pf~~~~~~~~~~~ 228 (313)
.++++|||.+...... ....++..|+|||.+.+...++.++|+||||+++|+++ +|+.||...........
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~ 233 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF 233 (274)
T ss_pred CccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH
Confidence 3799999987544222 22345677999998866556899999999999999985 69999987655443222
Q ss_pred HHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 229 IFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
.......+ ...++.+.++|.+||+.+|.+|||+.+++++
T Consensus 234 ~~~~~~~~------------------------------~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 234 YEKKHRLP------------------------------EPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHhccCCC------------------------------CCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 11100000 1245789999999999999999999999874
No 347
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=4.3e-38 Score=265.34 Aligned_cols=240 Identities=19% Similarity=0.292 Sum_probs=186.0
Q ss_pred eeeccccceEEEEEEeCc------------CCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcE
Q psy6391 20 EKIGEGTYGVVYKAKNKV------------TGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYR 87 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~------------~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 87 (313)
+.||+|++|.||+|+... ....+++|++.... ......+.+|+.+++.++||||+++++++..+..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~ 78 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVE 78 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 468999999999998532 23358888876543 2234577889999999999999999999999999
Q ss_pred EEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCC------eEEEecC
Q psy6391 88 LYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSN------IVKVADF 160 (313)
Q Consensus 88 ~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~------~~~l~df 160 (313)
.+++|||+++ +|...+.. ....+++..++.++.||+.|+.|||++|++|+||||+|||++.++. .++++||
T Consensus 79 ~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 79 NIMVEEFVEFGPLDLFMHR--KSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CEEEEecccCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 9999999986 55555443 2345899999999999999999999999999999999999976543 2799999
Q ss_pred CCccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHhcCCCCCC
Q psy6391 161 GLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA-TRKPLFQGDSEIDQLFRIFRVLTTPTED 239 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll-~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
|.+...... ....++..|+|||.+.....++.++||||||+++|+++ +|..||......+.. .........
T Consensus 157 g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~~~~~~--- 228 (262)
T cd05077 157 GIPITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYEGQCML--- 228 (262)
T ss_pred CCCccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHhcCccC---
Confidence 988654322 23456778999998865566899999999999999998 588888765443322 211110000
Q ss_pred CCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 240 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
....+.++.++|.+||+.||++||++.+++.+
T Consensus 229 --------------------------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 229 --------------------------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred --------------------------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 01245789999999999999999999999874
No 348
>KOG1026|consensus
Probab=100.00 E-value=1.8e-39 Score=293.39 Aligned_cols=256 Identities=26% Similarity=0.394 Sum_probs=213.8
Q ss_pred hhhhhccceeeeeeccccceEEEEEEeC-----cCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEE
Q psy6391 9 VKSRLEDYEKVEKIGEGTYGVVYKAKNK-----VTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMI 83 (313)
Q Consensus 9 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 83 (313)
...-..+....+.||+|+||.||+|+.. .+...||||.++..... ...++|.+|+.++..++|||||+++|.|.
T Consensus 481 ~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~-~~~~dF~REaeLla~l~H~nIVrLlGVC~ 559 (774)
T KOG1026|consen 481 LEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAEN-QARQDFRREAELLAELQHPNIVRLLGVCR 559 (774)
T ss_pred eEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccH-HHHHHHHHHHHHHHhccCCCeEEEEEEEc
Confidence 3445567788899999999999999853 34567999999865433 23589999999999999999999999999
Q ss_pred eCcEEEEEEeccc-cCHHHHHhhCCC-------CC----CCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecC
Q psy6391 84 ENYRLYLIFEFMS-MDLKKYIDTVPK-------GQ----FLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAK 151 (313)
Q Consensus 84 ~~~~~~lv~e~~~-~~l~~~~~~~~~-------~~----~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~ 151 (313)
.++-+++|+||+. |+|..++....+ +. +++..+...++.||+.|+.||-++.+||+||-..|+||..+
T Consensus 560 ~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 560 EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN 639 (774)
T ss_pred cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc
Confidence 9999999999997 799988875321 22 38899999999999999999999999999999999999887
Q ss_pred CCeEEEecCCCccccCCC--CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q psy6391 152 SNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFR 228 (313)
Q Consensus 152 ~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~ 228 (313)
-. +||+|||+++..-.. .+.....+-..+|||||.+.-++ ++.+|||||+||+|||+++ |..||......+.++.
T Consensus 640 l~-VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~k-FTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~ 717 (774)
T KOG1026|consen 640 LV-VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGK-FTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIEC 717 (774)
T ss_pred eE-EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCc-ccchhhhhhhhhhhhhhhccccCcccccchHHHHHH
Confidence 55 999999999876322 12222345578899999998654 9999999999999999999 9999999999999888
Q ss_pred HHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHh
Q psy6391 229 IFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENAL 295 (313)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l 295 (313)
+..+..-+-+ .++|.++.+|+..||+.+|.+||++.||=
T Consensus 718 i~~g~lL~~P----------------------------e~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 718 IRAGQLLSCP----------------------------ENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred HHcCCcccCC----------------------------CCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 8764332221 25789999999999999999999999974
No 349
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=4.1e-38 Score=268.59 Aligned_cols=266 Identities=24% Similarity=0.374 Sum_probs=194.0
Q ss_pred ccceeeeeeccccceEEEEEEe----CcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC--cE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKN----KVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN--YR 87 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~----~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~ 87 (313)
.-|++++.||+|++|.||.+.. ..++..|++|.++.... ......+.+|+.+++.++|+|++++++++.+. ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc-HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 3578999999999999999974 45688999999865432 22346788999999999999999999998875 57
Q ss_pred EEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 88 LYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 88 ~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
.+++|||++| +|.+++... ...+++..+..++.||+.+|+|||++|++|+||+|+||+++.++. ++|+|||.+...
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~-~~l~dfg~~~~~ 159 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRN--KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ-VKIGDFGLTKAI 159 (284)
T ss_pred eEEEEEccCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCC-EEECCCcccccc
Confidence 8999999975 888877652 234889999999999999999999999999999999999998876 999999998765
Q ss_pred CCCCc---ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCC
Q psy6391 167 GVPVR---IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 167 ~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
..... ......++..|+|||.+.+. .++.++||||||+++|+++++..|...... ...... .+.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~il~ellt~~~~~~~~~~--~~~~~~---~~~~~~~~~- 232 (284)
T cd05079 160 ETDKEYYTVKDDLDSPVFWYAPECLIQS-KFYIASDVWSFGVTLYELLTYCDSESSPMT--LFLKMI---GPTHGQMTV- 232 (284)
T ss_pred ccCccceeecCCCCCCccccCHHHhccC-CCCccccchhhhhhhhhhhcCCCCCccccc--hhhhhc---ccccccccH-
Confidence 43221 11223456679999988654 478999999999999999998765432211 000000 000000000
Q ss_pred CCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 244 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
....... .... .......++..+.+|+.+||+.||++||++.+++..
T Consensus 233 -~~~~~~~-~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 233 -TRLVRVL-EEGK-----RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred -HHHHHHH-HcCc-----cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 0000000 0000 000013578999999999999999999999999863
No 350
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3e-38 Score=276.36 Aligned_cols=256 Identities=23% Similarity=0.363 Sum_probs=195.0
Q ss_pred hhccceeeeeeccccceEEEEEEe-----CcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEeC
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKN-----KVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIEN 85 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~-----~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~ 85 (313)
.-++|++.+.||.|+||.||+|.+ ..+++.||+|+++..... .....+.+|+.++.++ +|+||+++++++...
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCCh-HHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 446899999999999999999984 345778999998754322 2235678899999999 689999999988654
Q ss_pred -cEEEEEEecccc-CHHHHHhhCCC-------------------------------------------------------
Q psy6391 86 -YRLYLIFEFMSM-DLKKYIDTVPK------------------------------------------------------- 108 (313)
Q Consensus 86 -~~~~lv~e~~~~-~l~~~~~~~~~------------------------------------------------------- 108 (313)
...+++|||+++ +|.+++.....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 568899999985 88877754210
Q ss_pred ---------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc--cccccc
Q psy6391 109 ---------GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR--IYTHEV 177 (313)
Q Consensus 109 ---------~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~--~~~~~~ 177 (313)
...++...+..++.||+.||.|||++|++|+||||+||+++.++. ++|+|||++........ ......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~-~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNV-VKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCc-EEEEecccccccccCcchhhcCCCC
Confidence 123678888999999999999999999999999999999998876 99999999876432211 111123
Q ss_pred ccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCC
Q psy6391 178 VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE 256 (313)
Q Consensus 178 ~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (313)
++..|+|||.+.+. .++.++|+||||+++|++++ |..||.................... .+
T Consensus 243 ~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------~~- 304 (343)
T cd05103 243 LPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR----------------AP- 304 (343)
T ss_pred CCcceECcHHhcCC-CCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCC----------------CC-
Confidence 35679999988654 47899999999999999997 9999976543333222222111100 00
Q ss_pred CchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 257 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
...++++.+++..||+.||.+||++.++++|
T Consensus 305 ----------~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 305 ----------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred ----------CCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 1256889999999999999999999999975
No 351
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=6.9e-38 Score=267.07 Aligned_cols=263 Identities=26% Similarity=0.341 Sum_probs=192.5
Q ss_pred ccc-eeeeeeccccceEEEEEE----eCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC--c
Q psy6391 14 EDY-EKVEKIGEGTYGVVYKAK----NKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN--Y 86 (313)
Q Consensus 14 ~~y-~~~~~lg~g~~~~v~~~~----~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~ 86 (313)
++| ++++.||+|++|+||.+. ...++..+++|.++.... ......+.+|+.+++.++||||+++++++... .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG-QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGK 81 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCc
Confidence 456 899999999999998765 334678899999875432 12346778899999999999999999988653 4
Q ss_pred EEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 87 RLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 87 ~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
..+++|||+.+ +|.+.+.. ..+++.+++.++.|++.||.|||++|++|+||||+||+++.++. ++|+|||++..
T Consensus 82 ~~~lv~e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~-~~l~dfg~~~~ 156 (283)
T cd05080 82 GLQLIMEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRL-VKIGDFGLAKA 156 (283)
T ss_pred eEEEEecCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCc-EEEeecccccc
Confidence 68999999986 77777754 23899999999999999999999999999999999999998876 99999999876
Q ss_pred cCCCCcc---cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCC
Q psy6391 166 FGVPVRI---YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 242 (313)
Q Consensus 166 ~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
....... .....++..|+|||.+... ..+.++||||||+++|+|++|..||....... ........ ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~--~~~~~~~~----~~~~ 229 (283)
T cd05080 157 VPEGHEYYRVREDGDSPVFWYAVECLKEN-KFSYASDVWSFGVTLYELLTHCDSKQSPPKKF--EEMIGPKQ----GQMT 229 (283)
T ss_pred cCCcchhhccCCCCCCCceeeCHhHhccc-CCCcccccHHHHHHHHHHHhCCCCCCCCcchh--hhhhcccc----cccc
Confidence 5432211 1112345669999988654 47899999999999999999999987543211 11110000 0000
Q ss_pred CCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 243 GVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...+.+...... .......++.++.+++.+||+.+|++|||+.++++
T Consensus 230 -~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 230 -VVRLIELLERGM------RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred -hhhhhhhhhcCC------CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 000000000000 00001347899999999999999999999999985
No 352
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=7.7e-38 Score=264.81 Aligned_cols=251 Identities=24% Similarity=0.352 Sum_probs=189.5
Q ss_pred eeeccccceEEEEEEeCc--CCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc
Q psy6391 20 EKIGEGTYGVVYKAKNKV--TGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~--~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (313)
+.||+|+||.||+|.... ....+++|.+..... ......+.+|+..++.++|+||+++++.+......++||||+++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASAT-PDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL 79 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCC-hHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence 368999999999996532 344678887654322 22235678899999999999999999999999999999999985
Q ss_pred -CHHHHHhhCCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCC--cc
Q psy6391 98 -DLKKYIDTVPK--GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV--RI 172 (313)
Q Consensus 98 -~l~~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~--~~ 172 (313)
+|.+.+..... ....++..+..++.||+.|+.|||+.|++|+||||+||+++.++. ++|+|||.+....... ..
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~-~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLS-VKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCc-EEEeccccccccccchheec
Confidence 88888766432 233567888999999999999999999999999999999999877 9999999886432211 11
Q ss_pred cccccccccccchhhhcC------CCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCC
Q psy6391 173 YTHEVVTLWYRAPEVLLG------SQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 245 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~------~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
.....++..|+|||++.. ....+.++|+||+|+++|+|++ |..||......+................
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----- 233 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKP----- 233 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCC-----
Confidence 122344667999998743 2346889999999999999999 7889987776665555443221111100
Q ss_pred CCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 246 KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
.....++..+.+++..|+ .||.+|||+.++++
T Consensus 234 ------------------~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 234 ------------------QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred ------------------cccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 001247788999999998 59999999999986
No 353
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.1e-37 Score=265.90 Aligned_cols=265 Identities=23% Similarity=0.336 Sum_probs=191.9
Q ss_pred ccceeeeeeccccceEEEEEEe----CcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEe--CcE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKN----KVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIE--NYR 87 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~----~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~ 87 (313)
.+|++++.||+|++|.||.+.. ..++..|++|.+..... .....+.+|+.+++.++|||++++++++.. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTA--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 81 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCH--HHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence 5789999999999999999973 45688999999865432 223567899999999999999999998753 357
Q ss_pred EEEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 88 LYLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 88 ~~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
.++|+||++ ++|.+++... ...+++..++.++.|++.||.|||++|++|+||||+||+++.++. ++|+|||++...
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~-~~l~dfg~~~~~ 158 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQKH--RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENR-VKIGDFGLTKVL 158 (284)
T ss_pred eEEEEEecCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCe-EEECCCcccccc
Confidence 899999997 5888887652 235889999999999999999999999999999999999998876 999999999865
Q ss_pred CCCCccc---ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCC
Q psy6391 167 GVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 167 ~~~~~~~---~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
....... ....++..|+|||.+.+. .++.++|+||||+++|+|++|..++....... .+........ ....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~-- 232 (284)
T cd05081 159 PQDKEYYKVREPGESPIFWYAPESLTES-KFSVASDVWSFGVVLYELFTYSDKSCSPPAEF--MRMMGNDKQG-QMIV-- 232 (284)
T ss_pred cCCCcceeecCCCCCceEeeCHHHhccC-CcChHHHHHHHHHHHHHHhhcCCcCCCcchhh--hhhccccccc-ccch--
Confidence 4322211 111224459999988654 47899999999999999999887665332211 0000000000 0000
Q ss_pred CCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 244 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
..+.+...... .......++.++.+|+.+||+.+|++|||+.+++.
T Consensus 233 -~~~~~~~~~~~------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 233 -YHLIELLKNNG------RLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred -HHHHHHHhcCC------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 00000000000 00001357889999999999999999999999976
No 354
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=8.9e-38 Score=264.59 Aligned_cols=245 Identities=26% Similarity=0.362 Sum_probs=190.5
Q ss_pred eeeccccceEEEEEEeCcCCc--EEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcEEEEEEeccc
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGA--LVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIENYRLYLIFEFMS 96 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~--~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~ 96 (313)
+.||+|++|.||+|.++.++. .+++|.+.... .......+.+|+.+++.+ +||||+++++++...+..+++|||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC-CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 368999999999999887765 46788776432 122235678899999999 79999999999999999999999997
Q ss_pred -cCHHHHHhhCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCC
Q psy6391 97 -MDLKKYIDTVP-------------KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGL 162 (313)
Q Consensus 97 -~~l~~~~~~~~-------------~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~ 162 (313)
++|.+++.... ....+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++. ++|+|||+
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~-~kl~dfgl 158 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV-AKIADFGL 158 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCe-EEECCCCC
Confidence 58888876432 1234789999999999999999999999999999999999998876 99999998
Q ss_pred ccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCC
Q psy6391 163 ARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNW 241 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
+........ ......+..|+|||.+... .++.++|+||||+++|+|++ |..||...........+.......
T Consensus 159 ~~~~~~~~~-~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~----- 231 (270)
T cd05047 159 SRGQEVYVK-KTMGRLPVRWMAIESLNYS-VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLE----- 231 (270)
T ss_pred ccccchhhh-ccCCCCccccCChHHHccC-CCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCC-----
Confidence 853321111 1111234569999988654 48899999999999999997 999998766555444432210000
Q ss_pred CCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 242 PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
. ...++.++.+++.+|++.||.+|||+.+++.
T Consensus 232 ------------~-----------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 232 ------------K-----------PLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred ------------C-----------CCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 0 0136789999999999999999999999985
No 355
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.1e-37 Score=292.93 Aligned_cols=149 Identities=26% Similarity=0.496 Sum_probs=131.1
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYL 90 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 90 (313)
.+++|.+++.||+|+||.||+|.+..+++.||+|+++.... .......+.+|+.+++.++|++|+++++.+......++
T Consensus 2 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 81 (669)
T cd05610 2 SIEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYL 81 (669)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEE
Confidence 37899999999999999999999998999999999975432 22223567789999999999999999999999999999
Q ss_pred EEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcc
Q psy6391 91 IFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLAR 164 (313)
Q Consensus 91 v~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~ 164 (313)
||||+.| +|.+++... +.+++..++.++.||+.||.|||+.||+|+||||+|||++.++. ++|+|||++.
T Consensus 82 VmEy~~g~~L~~li~~~---~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~-vkL~DFGls~ 152 (669)
T cd05610 82 VMEYLIGGDVKSLLHIY---GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGH-IKLTDFGLSK 152 (669)
T ss_pred EEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCC-EEEEeCCCCc
Confidence 9999965 888887653 34889999999999999999999999999999999999998876 9999999874
No 356
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=5.8e-38 Score=265.52 Aligned_cols=247 Identities=25% Similarity=0.389 Sum_probs=193.1
Q ss_pred eeeccccceEEEEEEeCcCC------cEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 20 EKIGEGTYGVVYKAKNKVTG------ALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~------~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
+.||.|++|.||+|+..... ..+++|.+...... .....+.+|+.+++.++||||+++++++.+.+..+++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATD-QEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccch-hhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence 36899999999999875433 67999988654321 224678899999999999999999999999999999999
Q ss_pred cccc-CHHHHHhhCC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCC----CeEEEecCCCcc
Q psy6391 94 FMSM-DLKKYIDTVP----KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKS----NIVKVADFGLAR 164 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~----~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~----~~~~l~df~~~~ 164 (313)
|+++ +|.+.+.... ....+++..+..++.|++.++.|||+.+++|+||+|+||+++.++ ..++++|||++.
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR 159 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccc
Confidence 9975 8888776432 223478899999999999999999999999999999999998866 149999999986
Q ss_pred ccCCCCc--ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCC
Q psy6391 165 AFGVPVR--IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNW 241 (313)
Q Consensus 165 ~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
....... ......++..|+|||.+.+. ..+.++|+||||+++|+|++ |+.||......+....+........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~---- 234 (269)
T cd05044 160 DIYKSDYYRKEGEGLLPVRWMAPESLLDG-KFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQK---- 234 (269)
T ss_pred ccccccccccCcccCCCccccCHHHHccC-CcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCC----
Confidence 5432211 11122345779999988654 47999999999999999998 9999987766554443322110000
Q ss_pred CCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 242 PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...+|..+.++|.+||+.+|.+||++.++++
T Consensus 235 ------------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 235 ------------------------PENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred ------------------------cccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 0246789999999999999999999999875
No 357
>KOG1290|consensus
Probab=100.00 E-value=2.7e-38 Score=268.82 Aligned_cols=285 Identities=28% Similarity=0.405 Sum_probs=210.8
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcC--------CCCceeeceeEE--
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELN--------HPNIVQLHDTMI-- 83 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~--------~~~i~~~~~~~~-- 83 (313)
.+|-++++||.|.|++||++.+..+.+.||+|+.+...-. .+....|+.+|++++ ..+||++++.|.
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhY---tEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs 154 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHY---TEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS 154 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHH---HHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence 5899999999999999999999999999999999866433 367789999999982 357999999997
Q ss_pred --eCcEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCCEEEecCCCe------
Q psy6391 84 --ENYRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHK-RRVLHRDLKPQNLLIDAKSNI------ 154 (313)
Q Consensus 84 --~~~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~-~~i~H~di~~~Nil~~~~~~~------ 154 (313)
.+.++++|+|+++.+|+.++.... -+.++...+++|++||+.||.|||. .||+|.||||+|||+..+.-.
T Consensus 155 GpNG~HVCMVfEvLGdnLLklI~~s~-YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~~~~~~~~ 233 (590)
T KOG1290|consen 155 GPNGQHVCMVFEVLGDNLLKLIKYSN-YRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEIDPAKDAR 233 (590)
T ss_pred CCCCcEEEEEehhhhhHHHHHHHHhC-CCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeeccccchhhhhh
Confidence 446899999999999999998754 3448999999999999999999996 599999999999998332000
Q ss_pred --------------------------------------------------------------------------------
Q psy6391 155 -------------------------------------------------------------------------------- 154 (313)
Q Consensus 155 -------------------------------------------------------------------------------- 154 (313)
T Consensus 234 ~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~~ 313 (590)
T KOG1290|consen 234 EAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGNE 313 (590)
T ss_pred hhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCccc
Confidence
Q ss_pred -------------------------------------------------------------------------------E
Q psy6391 155 -------------------------------------------------------------------------------V 155 (313)
Q Consensus 155 -------------------------------------------------------------------------------~ 155 (313)
+
T Consensus 314 ~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~v 393 (590)
T KOG1290|consen 314 STVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIRV 393 (590)
T ss_pred cchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCccceeE
Confidence 1
Q ss_pred EEecCCCccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCC------CChHHHHHHH
Q psy6391 156 KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQG------DSEIDQLFRI 229 (313)
Q Consensus 156 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~------~~~~~~~~~~ 229 (313)
||+|||-|+-. ....+....|..|.|||++.+.+ ++..+||||++|++++|+||...|.. ..+++.++.+
T Consensus 394 KIaDlGNACW~---~khFT~DIQTRQYRapEVllGsg-Y~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i 469 (590)
T KOG1290|consen 394 KIADLGNACWV---HKHFTEDIQTRQYRAPEVLLGSG-YSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALI 469 (590)
T ss_pred EEeeccchhhh---hhhhchhhhhhhccCcceeecCC-CCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHH
Confidence 11122211110 01111122367799999999876 89999999999999999999988864 4667888888
Q ss_pred HHhcCCCCCCCCCCCCCCCCcc---------ccCCCCchhhhhhhccC----CCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 230 FRVLTTPTEDNWPGVSKLPDYK---------TTFPEWSNFCLDKHVKN----LDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
+...+..+....-...-.++|- .++..|.....-..-.+ -..++.+|+.-||+.+|++||||.++|+
T Consensus 470 ~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~ 549 (590)
T KOG1290|consen 470 MELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLK 549 (590)
T ss_pred HHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhc
Confidence 8876665543222211111111 12233332222211122 3456779999999999999999999999
Q ss_pred CCCCCCCCCC
Q psy6391 297 HKYFADKTDL 306 (313)
Q Consensus 297 h~~~~~~~~~ 306 (313)
||||+.....
T Consensus 550 hPwLn~~~~~ 559 (590)
T KOG1290|consen 550 HPWLNPVAGP 559 (590)
T ss_pred CccccCCCCC
Confidence 9999976553
No 358
>KOG4645|consensus
Probab=100.00 E-value=4.3e-40 Score=307.06 Aligned_cols=262 Identities=28% Similarity=0.453 Sum_probs=219.1
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
..-+|+....||.|.||.||-+.+..+|+..|+|-++.+.........+.+|..++..++|||+|+++|+=.+.+..+|.
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 34467778899999999999999999999999999988876666678899999999999999999999999999999999
Q ss_pred Eecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCC
Q psy6391 92 FEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV 170 (313)
Q Consensus 92 ~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~ 170 (313)
||||+| +|.++++... ..++...+.+..|++.|+.|||++||||+||||.||+++.+|- +|++|||.|..+..+.
T Consensus 1313 MEyC~~GsLa~ll~~gr---i~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~-iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGR---IEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGL-IKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHHhccCcHHHHHHhcc---hhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCc-EEeecccceeEecCch
Confidence 999985 8888887632 2566666777899999999999999999999999999999985 9999999998876553
Q ss_pred c----ccccccccccccchhhhcCCC--CCCcchhHhHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHhcCCCCCCCCCC
Q psy6391 171 R----IYTHEVVTLWYRAPEVLLGSQ--RYSCPVDVWSIGCIFAEIATRKPLFQGDSEI-DQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 171 ~----~~~~~~~~~~~~~PE~~~~~~--~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~ 243 (313)
. ......||+.|||||++.+.+ .-.-++|||||||++.+|+||+-||...+.+ .+......+..+..++
T Consensus 1389 ~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~---- 1464 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPE---- 1464 (1509)
T ss_pred hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCch----
Confidence 2 233457899999999996543 3567999999999999999999999865443 3333333332222221
Q ss_pred CCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCCCC
Q psy6391 244 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 305 (313)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~~~ 305 (313)
.++++..+||..||..||.+|+++.|+++|.|=+...+
T Consensus 1465 ------------------------~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d 1502 (1509)
T KOG4645|consen 1465 ------------------------RLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTD 1502 (1509)
T ss_pred ------------------------hhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccccc
Confidence 48899999999999999999999999999999887654
No 359
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.1e-37 Score=262.14 Aligned_cols=251 Identities=23% Similarity=0.283 Sum_probs=189.0
Q ss_pred eeeccccceEEEEEEeC--cCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEeccc-
Q psy6391 20 EKIGEGTYGVVYKAKNK--VTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMS- 96 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~--~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~- 96 (313)
+.||+|++|.||+|... .++..+++|.++...... ....+.+|+.+++.++||||+++++++.+....++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQ-EQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChH-HHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence 36899999999999864 345679999886554322 23468889999999999999999999999999999999998
Q ss_pred cCHHHHHhhCCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc--c
Q psy6391 97 MDLKKYIDTVPK--GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR--I 172 (313)
Q Consensus 97 ~~l~~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~--~ 172 (313)
|+|.+++..... ....++..+..++.|++.|+.|||+.|++|+||||+||+++.++. ++|+|||.+........ .
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~-~kL~dfg~~~~~~~~~~~~~ 158 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLT-VKIGDYGLSHNKYKEDYYVT 158 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCc-EEECCccccccccCcceeec
Confidence 488888765322 234567788889999999999999999999999999999998876 99999999865432211 1
Q ss_pred cccccccccccchhhhcCCC------CCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCC
Q psy6391 173 YTHEVVTLWYRAPEVLLGSQ------RYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 245 (313)
Q Consensus 173 ~~~~~~~~~~~~PE~~~~~~------~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
.....++..|+|||.+.... .++.++|+||+|+++|++++ |..||......+................
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----- 233 (269)
T cd05087 159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKP----- 233 (269)
T ss_pred CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCC-----
Confidence 12234567899999885321 25789999999999999996 9999987665544333222111100000
Q ss_pred CCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 246 KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
......+..+.+++..|+ .+|++|||+++++.
T Consensus 234 ------------------~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 234 ------------------RLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred ------------------ccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 000136788999999999 68999999999974
No 360
>KOG1006|consensus
Probab=100.00 E-value=1.2e-40 Score=263.36 Aligned_cols=265 Identities=24% Similarity=0.375 Sum_probs=209.2
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhh-cCCCCceeeceeEEeCcEEEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKE-LNHPNIVQLHDTMIENYRLYL 90 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~l 90 (313)
.-++.+.++.||.|+||+|++..++.+|+..|+|.++....... ..+++.|...... -++|+||+++|....++-+|+
T Consensus 62 ~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~ke-q~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWi 140 (361)
T KOG1006|consen 62 TSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKE-QKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWI 140 (361)
T ss_pred ccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHH-HHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceee
Confidence 34556677899999999999999999999999999987654222 3566666665444 479999999999999999999
Q ss_pred EEeccccCHHHHHhhC--CCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 91 IFEFMSMDLKKYIDTV--PKGQFLAADKVKSITYQIFQAILFCHK-RRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 91 v~e~~~~~l~~~~~~~--~~~~~l~~~~~~~~~~~i~~~l~~Lh~-~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
.||.|+-++..+.... -+...++++.+..+....+.||.||.. .+|+|+|+||+|||++..|. +||||||.+..+-
T Consensus 141 CMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~-vKLCDFGIcGqLv 219 (361)
T KOG1006|consen 141 CMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGD-VKLCDFGICGQLV 219 (361)
T ss_pred eHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCC-EeeecccchHhHH
Confidence 9999998876665432 123458999999999999999999996 58999999999999999998 9999999997764
Q ss_pred CCCcccccccccccccchhhhcCCCC-CCcchhHhHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCCCCCCCCCC
Q psy6391 168 VPVRIYTHEVVTLWYRAPEVLLGSQR-YSCPVDVWSIGCIFAEIATRKPLFQGDSE-IDQLFRIFRVLTTPTEDNWPGVS 245 (313)
Q Consensus 168 ~~~~~~~~~~~~~~~~~PE~~~~~~~-~~~~~Di~slG~~l~~ll~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
.+... +...|-..|||||.+..... ++.+||+||||++||++.||..||+.-+. .+++.++.....+.....
T Consensus 220 ~SiAk-T~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~----- 293 (361)
T KOG1006|consen 220 DSIAK-TVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFD----- 293 (361)
T ss_pred HHHHh-hhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCc-----
Confidence 43222 33466777999999976554 89999999999999999999999985433 333333333211111111
Q ss_pred CCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 246 KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
......+..+..||..||.+|.+.||...+++.+||+..
T Consensus 294 ------------------~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~ 332 (361)
T KOG1006|consen 294 ------------------KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRM 332 (361)
T ss_pred ------------------ccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhh
Confidence 111358899999999999999999999999999999876
No 361
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.3e-37 Score=261.85 Aligned_cols=237 Identities=17% Similarity=0.280 Sum_probs=186.6
Q ss_pred eeeccccceEEEEEEeCcCC----------cEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEE
Q psy6391 20 EKIGEGTYGVVYKAKNKVTG----------ALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLY 89 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~----------~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 89 (313)
+.||+|++|.||+|.+..++ ..+++|.+...... ...+.+|+.+++.++|+||+++++++.. +..+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 76 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SLAFFETASLMSQLSHKHLVKLYGVCVR-DENI 76 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HHHHHHHHHHHHcCCCcchhheeeEEec-CCcE
Confidence 46899999999999997665 34777876544322 4788899999999999999999999988 7789
Q ss_pred EEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCC------eEEEecCCC
Q psy6391 90 LIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSN------IVKVADFGL 162 (313)
Q Consensus 90 lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~------~~~l~df~~ 162 (313)
+|+||+++ +|.+.+.... ..++...+..++.||+.||.|||++|++|+||||+||+++.++. .++|+|||.
T Consensus 77 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 77 MVEEYVKFGPLDVFLHREK--NNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEEEcCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 99999985 7777776532 25889999999999999999999999999999999999988761 399999999
Q ss_pred ccccCCCCcccccccccccccchhhhcCC-CCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCC
Q psy6391 163 ARAFGVPVRIYTHEVVTLWYRAPEVLLGS-QRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDN 240 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
+...... ....++..|+|||.+... ..++.++|+||+|++++++++ |..||............ ......+
T Consensus 155 a~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~-~~~~~~~--- 226 (259)
T cd05037 155 PITVLSR----EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFY-QDQHRLP--- 226 (259)
T ss_pred ccccccc----cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHH-hcCCCCC---
Confidence 8765431 233456779999998765 358999999999999999999 57888766433222221 1100000
Q ss_pred CCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 241 WPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
......+.+++.+||..+|++|||+.++++
T Consensus 227 --------------------------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 227 --------------------------MPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred --------------------------CCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 012378899999999999999999999985
No 362
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.6e-37 Score=267.39 Aligned_cols=252 Identities=21% Similarity=0.321 Sum_probs=195.0
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCc----EEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGA----LVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYR 87 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~----~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 87 (313)
..++|++.+.||+|++|.||++.+..++. .+++|.+..... ......+.+|+.+++.++||||+++++++... .
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~ 82 (303)
T cd05110 5 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG-PKANVEFMDEALIMASMDHPHLVRLLGVCLSP-T 82 (303)
T ss_pred chhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-C
Confidence 34688999999999999999999876665 468887754322 12224678899999999999999999998765 4
Q ss_pred EEEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 88 LYLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 88 ~~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
.++++++++ |+|.+.+... ...+++..+..++.|++.||.|||++|++|+||||+||+++.++. ++|+|||.+...
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~-~kL~Dfg~~~~~ 159 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEH--KDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNH-VKITDFGLARLL 159 (303)
T ss_pred ceeeehhcCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCc-eEEccccccccc
Confidence 678899997 5788777652 334889999999999999999999999999999999999988776 999999999765
Q ss_pred CCCCcc--cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCC
Q psy6391 167 GVPVRI--YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 167 ~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
...... .....++..|+|||.+.+. ..+.++||||||+++|++++ |..||..................+..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~----- 233 (303)
T cd05110 160 EGDEKEYNADGGKMPIKWMALECIHYR-KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQP----- 233 (303)
T ss_pred cCcccccccCCCccccccCCHHHhccC-CCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCC-----
Confidence 432221 1122346679999988654 48999999999999999997 89999876544433322211111100
Q ss_pred CCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 244 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
...+..+.+++.+|+..+|++||++.++++.
T Consensus 234 -----------------------~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 234 -----------------------PICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred -----------------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1356889999999999999999999998874
No 363
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.9e-37 Score=261.38 Aligned_cols=244 Identities=21% Similarity=0.328 Sum_probs=185.7
Q ss_pred eeeccccceEEEEEEeCc---CCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEE-eCcEEEEEEecc
Q psy6391 20 EKIGEGTYGVVYKAKNKV---TGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMI-ENYRLYLIFEFM 95 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~---~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~ 95 (313)
+.||+|++|.||+|.+.. .+..+++|.+..... ......+.+|+.+++.++|||++++++++. .++..++++||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD-LEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCC-HHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC
Confidence 368999999999998642 345799998753221 112356778999999999999999999775 456688999999
Q ss_pred cc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCC----
Q psy6391 96 SM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV---- 170 (313)
Q Consensus 96 ~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~---- 170 (313)
.+ +|.+++... ....+...+..++.||+.||.|||+.+++|+||+|+||+++.++. ++|+|||++.......
T Consensus 80 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~-~kl~dfg~~~~~~~~~~~~~ 156 (262)
T cd05058 80 KHGDLRNFIRSE--THNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFT-VKVADFGLARDIYDKEYYSV 156 (262)
T ss_pred CCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCc-EEECCccccccccCCcceee
Confidence 84 888887653 233677788899999999999999999999999999999998876 9999999987543211
Q ss_pred cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy6391 171 RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 249 (313)
Q Consensus 171 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (313)
.......++..|+|||.+... .++.++||||||+++|+|++| ..||...+..............+..
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 224 (262)
T cd05058 157 HNHTGAKLPVKWMALESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQP----------- 224 (262)
T ss_pred cccccCcCCccccChhHhccC-ccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCC-----------
Confidence 111122346679999988654 478999999999999999994 6667766555444433221111000
Q ss_pred ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 250 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
..+++.+.+++.+||+.+|++||++.+++.
T Consensus 225 -----------------~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 225 -----------------EYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred -----------------CcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 135789999999999999999999999986
No 364
>KOG0668|consensus
Probab=100.00 E-value=2e-39 Score=251.42 Aligned_cols=283 Identities=31% Similarity=0.583 Sum_probs=217.6
Q ss_pred chhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcC-CCCceeeceeEEeC
Q psy6391 7 DDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELN-HPNIVQLHDTMIEN 85 (313)
Q Consensus 7 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~ 85 (313)
.+|. ..++|++.+++|+|.++.||.|.+..+++++++|+++.-+ ...+.+|+.+|+.++ +|||+.++++..++
T Consensus 32 i~wg-~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk-----kkKIkREikIL~nL~gg~NIi~L~DiV~Dp 105 (338)
T KOG0668|consen 32 IDWG-NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK-----KKKIKREIKILQNLRGGPNIIKLLDIVKDP 105 (338)
T ss_pred eecc-ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH-----HHHHHHHHHHHHhccCCCCeeehhhhhcCc
Confidence 3444 6889999999999999999999999899999999997543 468999999999995 99999999999876
Q ss_pred --cEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCC
Q psy6391 86 --YRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGL 162 (313)
Q Consensus 86 --~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~ 162 (313)
....+|+|+++. +...+... ++...++..+.+++.||.|+|+.||.|+|+||.|+|++.....++|+|||+
T Consensus 106 ~SktpaLiFE~v~n~Dfk~ly~t------l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGL 179 (338)
T KOG0668|consen 106 ESKTPSLIFEYVNNTDFKQLYPT------LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGL 179 (338)
T ss_pred cccCchhHhhhhccccHHHHhhh------hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecch
Confidence 467899999987 44444433 788889999999999999999999999999999999999888899999999
Q ss_pred ccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCC-CCCChHHHHHHHHHhcCCCCCCCC
Q psy6391 163 ARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLF-QGDSEIDQLFRIFRVLTTPTEDNW 241 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
|.+...+ ..+...+.+..|--||++-....++.+-|+|||||++..|+..+.|| .+.+..+++-++.+..+.......
T Consensus 180 AEFYHp~-~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Y 258 (338)
T KOG0668|consen 180 AEFYHPG-KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAY 258 (338)
T ss_pred HhhcCCC-ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHH
Confidence 9887644 23344466777999999988778999999999999999999988776 455556666666554332111000
Q ss_pred ---CCCCCCCCccccCCC-----CchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 242 ---PGVSKLPDYKTTFPE-----WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 242 ---~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
..+.--+++..-... |....-...-.-.++++.+|+.++|..|..+|||+.|++.||||..
T Consensus 259 l~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~ 327 (338)
T KOG0668|consen 259 LNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAP 327 (338)
T ss_pred HHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHH
Confidence 000000111110111 1111111111225799999999999999999999999999999976
No 365
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=4.1e-37 Score=263.64 Aligned_cols=255 Identities=17% Similarity=0.232 Sum_probs=185.3
Q ss_pred ccceeeeeeccccceEEEEEEeCcC---CcEEEEEEecccCCCCCCc---------hhHHHHHHHHhhcCCCCceeecee
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVT---GALVAIKKIRMENDDEGIP---------ATAIREISVLKELNHPNIVQLHDT 81 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~---~~~~~~K~~~~~~~~~~~~---------~~~~~e~~~l~~l~~~~i~~~~~~ 81 (313)
++|++.+.||+|+||.||+|.+..+ +..+++|+........... .....+...+..+.|++++++++.
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 6899999999999999999998766 6677777654332211100 011223334455689999999997
Q ss_pred EEeCc----EEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEE
Q psy6391 82 MIENY----RLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKV 157 (313)
Q Consensus 82 ~~~~~----~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l 157 (313)
+.... ..+++++++..++.+.+.... ..++..++.++.|++.||.|||+.+++|+||||+|||++.++. ++|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~-~~l 167 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVENTKEIFKRIK---CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNR-GYI 167 (294)
T ss_pred eeEecCCceEEEEEEehhccCHHHHHHhhc---cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCc-EEE
Confidence 66443 457888888777777766532 2578889999999999999999999999999999999998876 999
Q ss_pred ecCCCccccCCCC-------cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCCh-HHHHHHH
Q psy6391 158 ADFGLARAFGVPV-------RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE-IDQLFRI 229 (313)
Q Consensus 158 ~df~~~~~~~~~~-------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-~~~~~~~ 229 (313)
+|||++....... .......||..|+|||.+.+. .++.++||||||+++|+|++|..||..... .......
T Consensus 168 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~-~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~ 246 (294)
T PHA02882 168 IDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGA-CVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAA 246 (294)
T ss_pred EEcCCceeeccCCcccccccccccccCCCccccCHHHhCCC-CCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHh
Confidence 9999987653211 111223689999999988754 489999999999999999999999987633 2222111
Q ss_pred HH-hcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 230 FR-VLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 230 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
.. ........ ....+..++++.+++..|++.+|.+||+..++++
T Consensus 247 ~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 247 KCDFIKRLHEG-----------------------KIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HHHHHHHhhhh-----------------------hhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 11 00000000 0011346789999999999999999999999875
No 366
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.9e-37 Score=264.28 Aligned_cols=255 Identities=25% Similarity=0.402 Sum_probs=197.1
Q ss_pred hccceeeeeeccccceEEEEEEeC----cCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEe--Cc
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNK----VTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIE--NY 86 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~----~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~ 86 (313)
-++|++.+.||+|++|.||++... .++..+++|++...... .....+.+|+.+++.++|+||+++++++.. ..
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~ 81 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR 81 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence 467889999999999999999864 34789999999765443 234678899999999999999999999887 56
Q ss_pred EEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 87 RLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 87 ~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
..+++|||+.+ +|.+.+.... ..+++..+..++.|++.||.+||+.|++|+||+|+||+++.++. ++|+|||.+..
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~-~~l~dfg~~~~ 158 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDL-VKISDFGLAKV 158 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCC-EEEcccccccc
Confidence 88999999975 8888876532 24899999999999999999999999999999999999998876 99999999987
Q ss_pred cCCCCccc---ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHH-----------HHHHHH
Q psy6391 166 FGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQ-----------LFRIFR 231 (313)
Q Consensus 166 ~~~~~~~~---~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-----------~~~~~~ 231 (313)
........ ....++..|++||.+.+. ..+.++|+||+|+++++|++|..|+........ ......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05038 159 LPEDKDYYYVKEPGESPIFWYAPECLRTS-KFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE 237 (284)
T ss_pred cccCCcceeccCCCCCcccccCcHHHccC-CCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHH
Confidence 65322211 112335569999988654 488999999999999999999999865422110 111111
Q ss_pred hcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 232 VLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
........ + ....++.++.+++.+||+.+|.+|||+.++++
T Consensus 238 ~~~~~~~~---------------~---------~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 238 LLKEGERL---------------P---------RPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred HHHcCCcC---------------C---------CCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 00000000 0 00236789999999999999999999999985
No 367
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=7.8e-38 Score=259.87 Aligned_cols=228 Identities=24% Similarity=0.339 Sum_probs=182.8
Q ss_pred ccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc-CHHHHH
Q psy6391 25 GTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM-DLKKYI 103 (313)
Q Consensus 25 g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~ 103 (313)
|.+|.||++.+..+++.|++|.+..... ..+|...+....|||++++++++.+.+..+++|||+++ +|.+.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 76 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE-------YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI 76 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh-------hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHH
Confidence 8899999999999999999999876431 22344445555799999999999999999999999985 888877
Q ss_pred hhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccccccccccccc
Q psy6391 104 DTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYR 183 (313)
Q Consensus 104 ~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~ 183 (313)
... ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++. ++++|||.+....... ....++..|+
T Consensus 77 ~~~---~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~-~~l~df~~~~~~~~~~---~~~~~~~~y~ 149 (237)
T cd05576 77 SKF---LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGH-IQLTYFSRWSEVEDSC---DGEAVENMYC 149 (237)
T ss_pred HHh---cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCC-EEEecccchhcccccc---ccCCcCcccc
Confidence 653 34899999999999999999999999999999999999999877 9999999876554321 2234466799
Q ss_pred chhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhh
Q psy6391 184 APEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD 263 (313)
Q Consensus 184 ~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (313)
|||.+... ..+.++|+||+|+++|++++|..|+........ .. ....++
T Consensus 150 aPE~~~~~-~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~---------~~-------------~~~~~~-------- 198 (237)
T cd05576 150 APEVGGIS-EETEACDWWSLGAILFELLTGKTLVECHPSGIN---------TH-------------TTLNIP-------- 198 (237)
T ss_pred CCcccCCC-CCCchhhHHHHHHHHHHHHHCcchhhcCchhcc---------cc-------------cccCCc--------
Confidence 99987543 478899999999999999999988754321100 00 000111
Q ss_pred hhccCCCHHHHHHHHHHhccCCCCCCCH-----HHHhcCCCC
Q psy6391 264 KHVKNLDQDGLDLLEKTLIYCPATRINA-----ENALKHKYF 300 (313)
Q Consensus 264 ~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~e~l~h~~~ 300 (313)
..+++.+.++|.+||+.||.+||++ +++++||||
T Consensus 199 ---~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 199 ---EWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred ---ccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 2478899999999999999999985 999999997
No 368
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=4.8e-37 Score=260.42 Aligned_cols=251 Identities=21% Similarity=0.283 Sum_probs=193.6
Q ss_pred ceeeeeeccccceEEEEEEeC---cCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc------
Q psy6391 16 YEKVEKIGEGTYGVVYKAKNK---VTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENY------ 86 (313)
Q Consensus 16 y~~~~~lg~g~~~~v~~~~~~---~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------ 86 (313)
|.+.+.||+|++|.||+|... .+++.+++|++..........+.+.+|+.+++.++|||++++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 678889999999999999864 35788999999765544434467889999999999999999999886532
Q ss_pred EEEEEEeccc-cCHHHHHhhCC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCC
Q psy6391 87 RLYLIFEFMS-MDLKKYIDTVP---KGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGL 162 (313)
Q Consensus 87 ~~~lv~e~~~-~~l~~~~~~~~---~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~ 162 (313)
..+++++|+. ++|...+.... ....++...+..++.||+.+|.|||+.|++|+||+|+||+++.++. ++|+|||.
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~-~kl~dfg~ 159 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMT-VCVADFGL 159 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCC-EEECcccc
Confidence 2468889887 47766653211 2234788999999999999999999999999999999999988876 99999999
Q ss_pred ccccCCCCc--ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCC
Q psy6391 163 ARAFGVPVR--IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTED 239 (313)
Q Consensus 163 ~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
+........ ......++..|++||.+.... .+.++|+||||+++|++++ |..||...........+........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-- 236 (273)
T cd05074 160 SKKIYSGDYYRQGCASKLPVKWLALESLADNV-YTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQ-- 236 (273)
T ss_pred cccccCCcceecCCCccCchhhcCHhHHhcCc-cchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCC--
Confidence 876532211 112223456799999886544 7889999999999999999 8899987665544433332110000
Q ss_pred CCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 240 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
....+..+.+++.+||+.+|++||++.+++.
T Consensus 237 --------------------------~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 237 --------------------------PPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred --------------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0236789999999999999999999999986
No 369
>KOG0194|consensus
Probab=100.00 E-value=4.9e-38 Score=275.08 Aligned_cols=257 Identities=24% Similarity=0.357 Sum_probs=209.0
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcCCc---E-EEEEEecccC-CCCCCchhHHHHHHHHhhcCCCCceeeceeE
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGA---L-VAIKKIRMEN-DDEGIPATAIREISVLKELNHPNIVQLHDTM 82 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~---~-~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 82 (313)
.|...-++-.+.++||+|+||.||.|..+..+. . ||+|..+... ........+.+|+++++.++||||++++|++
T Consensus 151 ~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa 230 (474)
T KOG0194|consen 151 KWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVA 230 (474)
T ss_pred ccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 344444566677999999999999999764422 3 8999988632 4444457888999999999999999999999
Q ss_pred EeCcEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCC
Q psy6391 83 IENYRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFG 161 (313)
Q Consensus 83 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~ 161 (313)
.+..-+++|||+++| +|.+.++.... .++..+...++.+.+.||+|||+++++|+||-..|+|++.++. +||+|||
T Consensus 231 ~~~~Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~-vKISDFG 307 (474)
T KOG0194|consen 231 VLEEPLMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGV-VKISDFG 307 (474)
T ss_pred cCCCccEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCe-EEeCccc
Confidence 999999999999986 99999987433 5899999999999999999999999999999999999998765 8999999
Q ss_pred CccccCCCCcccc-cccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCC
Q psy6391 162 LARAFGVPVRIYT-HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTED 239 (313)
Q Consensus 162 ~~~~~~~~~~~~~-~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
++.... ...... ..--...|+|||.+... .++.++||||+|+++||+.+ |..||.+....+...++.....+.+.+
T Consensus 308 Ls~~~~-~~~~~~~~~klPirWLAPEtl~~~-~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~ 385 (474)
T KOG0194|consen 308 LSRAGS-QYVMKKFLKKLPIRWLAPETLNTG-IFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIP 385 (474)
T ss_pred cccCCc-ceeeccccccCcceecChhhhccC-ccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCC
Confidence 987653 111111 11235679999999765 69999999999999999999 889999999988888885432222211
Q ss_pred CCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 240 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...|.++..++.+|+..||+.||++.++.+
T Consensus 386 ---------------------------~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 386 ---------------------------SKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred ---------------------------CCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 136789999999999999999999998864
No 370
>KOG0670|consensus
Probab=100.00 E-value=9.7e-39 Score=273.40 Aligned_cols=284 Identities=31% Similarity=0.475 Sum_probs=227.3
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcC------CCCceeeceeEEeCc
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELN------HPNIVQLHDTMIENY 86 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~ 86 (313)
-.+|.|....|.|-|++|..|.+...|..||||++..+... ...=+.|+++|+.|. --|+++++..|...+
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M---~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn 507 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM---HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN 507 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH---hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc
Confidence 35899999999999999999999999999999999866433 355678999999994 458999999999999
Q ss_pred EEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 87 RLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 87 ~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
++|+|+|.+..+|.+++..+..+-.|....++..+.|++.||..|-..|++|.||||+||||++..+++||||||.|...
T Consensus 508 HLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~ 587 (752)
T KOG0670|consen 508 HLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFA 587 (752)
T ss_pred eeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcccccc
Confidence 99999999999999999998888789999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCC--------
Q psy6391 167 GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTE-------- 238 (313)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-------- 238 (313)
+.+.- +...-+..|.|||.+.+-+ ++...|+||.||+||+|.||+..|.+.....++...+..-+..+.
T Consensus 588 ~enei--tPYLVSRFYRaPEIiLG~~-yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF 664 (752)
T KOG0670|consen 588 SENEI--TPYLVSRFYRAPEIILGLP-YDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQF 664 (752)
T ss_pred ccccc--cHHHHHHhccCcceeecCc-ccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcch
Confidence 65433 2334467799999998755 899999999999999999999999998888877776655444332
Q ss_pred ------CCCCCCC----CCCCccc--cCCCCch-hhhhhhc----------cCCCHHHHHHHHHHhccCCCCCCCHHHHh
Q psy6391 239 ------DNWPGVS----KLPDYKT--TFPEWSN-FCLDKHV----------KNLDQDGLDLLEKTLIYCPATRINAENAL 295 (313)
Q Consensus 239 ------~~~~~~~----~~~~~~~--~~~~~~~-~~~~~~~----------~~~~~~l~~li~~~l~~dp~~Rps~~e~l 295 (313)
..++.+. +.++... ......+ ..+...+ +.+-..+.+|+.+||..||++|.|+.++|
T Consensus 665 ~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL 744 (752)
T KOG0670|consen 665 KDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQAL 744 (752)
T ss_pred hhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHh
Confidence 2222211 1111000 0000000 1111111 22346788999999999999999999999
Q ss_pred cCCCCCC
Q psy6391 296 KHKYFAD 302 (313)
Q Consensus 296 ~h~~~~~ 302 (313)
.||||++
T Consensus 745 ~HpFi~~ 751 (752)
T KOG0670|consen 745 KHPFITE 751 (752)
T ss_pred cCCcccC
Confidence 9999986
No 371
>KOG1095|consensus
Probab=100.00 E-value=2.4e-37 Score=289.10 Aligned_cols=253 Identities=20% Similarity=0.345 Sum_probs=208.5
Q ss_pred hccceeeeeeccccceEEEEEEeCcCC-----cEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTG-----ALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYR 87 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~-----~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 87 (313)
-+..+..+.||+|.||.||.|...... ..|++|.++.....+. ...|.+|+.+++.++|||||+++|++.+...
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~-~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~ 769 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQE-VSDFLKEALLMSKFDHPNIVSLIGVCLDSGP 769 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHH-HHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence 345677889999999999999875332 2489998876543332 4789999999999999999999999999999
Q ss_pred EEEEEecccc-CHHHHHhhCCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCC
Q psy6391 88 LYLIFEFMSM-DLKKYIDTVPK----GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGL 162 (313)
Q Consensus 88 ~~lv~e~~~~-~l~~~~~~~~~----~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~ 162 (313)
.+|++|||.| +|..++++... ...++...+..++.||+.|++||+++++||+||-.+|+|++.... +||+|||+
T Consensus 770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~-VKIaDFGl 848 (1025)
T KOG1095|consen 770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRV-VKIADFGL 848 (1025)
T ss_pred cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCc-EEEcccch
Confidence 9999999985 89999887522 334889999999999999999999999999999999999999854 99999999
Q ss_pred ccccCCCCc--ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCC
Q psy6391 163 ARAFGVPVR--IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTED 239 (313)
Q Consensus 163 ~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
|.......- ......-...|||||.+.. ..++.++||||||+++||+++ |..||...+..+..........-+.+
T Consensus 849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d-~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P- 926 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKD-GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPP- 926 (1025)
T ss_pred hHhhhhchheeccCccccceecCCHHHHhh-cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCC-
Confidence 985422211 1111122467999999986 459999999999999999999 89999999888888766665433332
Q ss_pred CCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 240 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
..+|+.+.+++..||+.+|++||++..+++
T Consensus 927 ---------------------------~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 927 ---------------------------SYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred ---------------------------CCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 247889999999999999999999999997
No 372
>KOG0696|consensus
Probab=100.00 E-value=7.1e-38 Score=261.74 Aligned_cols=259 Identities=25% Similarity=0.387 Sum_probs=219.2
Q ss_pred hhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC-CCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcE
Q psy6391 10 KSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-DEGIPATAIREISVLKEL-NHPNIVQLHDTMIENYR 87 (313)
Q Consensus 10 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~ 87 (313)
+....+|..+..||+|+||.|-++..+.+.+.||||+++++-- +.+..+--..|-.+|... +-|.+++++..|..-+.
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR 424 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR 424 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence 5677899999999999999999999999999999999988752 222234455677777777 57788999999999999
Q ss_pred EEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 88 LYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 88 ~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
+|+||||+.| +|...++. -+.+.+..+.-.+..|+-+|-+||++||+++|||.+|||++.+|. +||+|||++..-
T Consensus 425 LyFVMEyvnGGDLMyhiQQ---~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGH-iKi~DFGmcKEn 500 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQ---VGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGH-IKIADFGMCKEN 500 (683)
T ss_pred eeeEEEEecCchhhhHHHH---hcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCc-eEeeeccccccc
Confidence 9999999986 66555554 345888899999999999999999999999999999999999998 999999999764
Q ss_pred CCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 167 GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
-.........+||+.|+|||.+.- .+++.+.|.||+|++||+|+.|+.||++.+..+.++.+....-.-+
T Consensus 501 i~~~~TTkTFCGTPdYiAPEIi~Y-qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyP--------- 570 (683)
T KOG0696|consen 501 IFDGVTTKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYP--------- 570 (683)
T ss_pred ccCCcceeeecCCCcccccceEEe-cccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCc---------
Confidence 333344456789999999998764 5699999999999999999999999999999999998887432211
Q ss_pred CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC-----HHHHhcCCCCCC
Q psy6391 247 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN-----AENALKHKYFAD 302 (313)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~e~l~h~~~~~ 302 (313)
..+|.++.++.+..|...|.+|.. -.++-.||||..
T Consensus 571 --------------------KslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~ 611 (683)
T KOG0696|consen 571 --------------------KSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRR 611 (683)
T ss_pred --------------------ccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhh
Confidence 258999999999999999999984 468889999987
No 373
>KOG0587|consensus
Probab=100.00 E-value=3.8e-37 Score=277.90 Aligned_cols=266 Identities=28% Similarity=0.469 Sum_probs=226.1
Q ss_pred chhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEE--
Q psy6391 7 DDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMI-- 83 (313)
Q Consensus 7 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~-- 83 (313)
+..+.-.+.|++.+.+|.|.+|.||+++++.+++..|+|+.......+ +.+..|.++++.. .|||++.++++|.
T Consensus 12 ~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d---eEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 12 SSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE---EEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred hhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc---HHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 344566778999999999999999999999999999999998765443 7888899999998 6999999999987
Q ss_pred ---eCcEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEec
Q psy6391 84 ---ENYRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVAD 159 (313)
Q Consensus 84 ---~~~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~d 159 (313)
.++++|+|||||+| +.-++..... +..+.+..+.-+++.++.++.+||...++|+|||-.|||++.++. +||+|
T Consensus 89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~-VKLvD 166 (953)
T KOG0587|consen 89 DPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAE-VKLVD 166 (953)
T ss_pred cCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCc-EEEee
Confidence 45799999999985 7778888776 778999999999999999999999999999999999999999988 99999
Q ss_pred CCCccccCCCCcccccccccccccchhhhcCCC----CCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCC
Q psy6391 160 FGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQ----RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT 235 (313)
Q Consensus 160 f~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~----~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~ 235 (313)
||.+.............+||+.|||||++.... .++.++|+||||++..+|..|.+|+-...+...+..+-+. +
T Consensus 167 FGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRN--P 244 (953)
T KOG0587|consen 167 FGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN--P 244 (953)
T ss_pred eeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCC--C
Confidence 999999988877778889999999999996432 4678999999999999999999999877665544443221 1
Q ss_pred CCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 236 PTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
|+ ... . ...=++++.+||..||.+|-.+||+..++|.|||+++.
T Consensus 245 PP-kLk----r-------------------p~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 245 PP-KLK----R-------------------PKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ 288 (953)
T ss_pred Cc-ccc----c-------------------hhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence 11 100 0 01246899999999999999999999999999999954
No 374
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=4.1e-36 Score=254.16 Aligned_cols=250 Identities=21% Similarity=0.316 Sum_probs=187.3
Q ss_pred eeeccccceEEEEEEeCcC--CcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc
Q psy6391 20 EKIGEGTYGVVYKAKNKVT--GALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~--~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (313)
+.||+|++|.||++....+ ...+++|.+...... .....+.+|+.+++.++|||++++++.+.+....++||||+++
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASS-KEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL 79 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCCh-HHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence 3699999999999975422 234566666543221 2246788999999999999999999999999999999999985
Q ss_pred -CHHHHHhhCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC--Cccc
Q psy6391 98 -DLKKYIDTVPK-GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP--VRIY 173 (313)
Q Consensus 98 -~l~~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~--~~~~ 173 (313)
+|.+++..... ....+...++.++.||+.||.|||+.+++|+||||+|||++.++. ++|+|||.+...... ....
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~-~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLT-VKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCcc-EEecccccccccCcchhhhcc
Confidence 88888765322 234677788899999999999999999999999999999998876 999999987543211 1111
Q ss_pred ccccccccccchhhhcCC------CCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCC-CCCCCCCCC
Q psy6391 174 THEVVTLWYRAPEVLLGS------QRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTP-TEDNWPGVS 245 (313)
Q Consensus 174 ~~~~~~~~~~~PE~~~~~------~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 245 (313)
....++..|+|||++... ...+.++|+||+|+++|+|++ |..||......+............ ..+..
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---- 234 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQL---- 234 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCcc----
Confidence 234567889999987431 235789999999999999997 577888776666555544321111 11100
Q ss_pred CCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 246 KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...+++.+.+++..|+ .+|++||++.++++
T Consensus 235 --------------------~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 235 --------------------ELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred --------------------CCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 1236788999999999 67999999999864
No 375
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=4.6e-36 Score=249.36 Aligned_cols=243 Identities=41% Similarity=0.640 Sum_probs=198.5
Q ss_pred cceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecccc-CHHHHHh
Q psy6391 26 TYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSM-DLKKYID 104 (313)
Q Consensus 26 ~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~ 104 (313)
++|.||++.+..+++.+++|++........ ...+.+|+..+++++|++++++++.+......++++|++++ +|.+.+.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence 579999999998899999999876543322 47888999999999999999999999999999999999997 8888876
Q ss_pred hCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccccccccccc
Q psy6391 105 TVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 184 (313)
Q Consensus 105 ~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~ 184 (313)
... .++...++.++.+++.++.+||+.|++|+||+|+||+++.++. ++++|||.+....... ......++..|+|
T Consensus 80 ~~~---~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~-~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~ 154 (244)
T smart00220 80 KRG---RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGH-VKLADFGLARQLDPGG-LLTTFVGTPEYMA 154 (244)
T ss_pred hcc---CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCc-EEEccccceeeecccc-ccccccCCcCCCC
Confidence 532 2889999999999999999999999999999999999998876 9999999998765432 2234567888999
Q ss_pred hhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhh
Q psy6391 185 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK 264 (313)
Q Consensus 185 PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (313)
||.+... ..+.++|+|++|++++++++|..||..........+.............
T Consensus 155 pE~~~~~-~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 210 (244)
T smart00220 155 PEVLLGK-GYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPE----------------------- 210 (244)
T ss_pred HHHHccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCcccc-----------------------
Confidence 9988754 4788999999999999999999999874333333333221111110000
Q ss_pred hccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCC
Q psy6391 265 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 300 (313)
Q Consensus 265 ~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~ 300 (313)
..++.++.+++.+|+..+|++||++.++++||||
T Consensus 211 --~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 211 --WKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred --ccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 1167899999999999999999999999999997
No 376
>KOG0614|consensus
Probab=100.00 E-value=8.9e-39 Score=272.96 Aligned_cols=258 Identities=24% Similarity=0.412 Sum_probs=225.0
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccC-CCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEN-DDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYL 90 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 90 (313)
.+++++++..||-|+||.|-++..+.....+|+|++++.. .+....+.+..|-.++...+.|.|++++-.|.++..+|+
T Consensus 418 ~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYm 497 (732)
T KOG0614|consen 418 KLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYM 497 (732)
T ss_pred chhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhh
Confidence 4678889999999999999999987665568999987654 444556788899999999999999999999999999999
Q ss_pred EEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 91 IFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 91 v~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
+||-|- |.+...++. .+.+.....+-++..+++|+.|||++||+++||||+|.+++.+|. +||.|||+++..+.+
T Consensus 498 LmEaClGGElWTiLrd---Rg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy-~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 498 LMEACLGGELWTILRD---RGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGY-LKLVDFGFAKKIGSG 573 (732)
T ss_pred hHHhhcCchhhhhhhh---cCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCc-eEEeehhhHHHhccC
Confidence 999985 477666664 556889999999999999999999999999999999999999988 999999999999876
Q ss_pred CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy6391 170 VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 249 (313)
Q Consensus 170 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (313)
... ...+||+.|.|||.+.+.+ -+.+.|.||||+++|+|++|.+||.+.++...+..+.++.....
T Consensus 574 ~KT-wTFcGTpEYVAPEIILnKG-HD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~------------ 639 (732)
T KOG0614|consen 574 RKT-WTFCGTPEYVAPEIILNKG-HDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIE------------ 639 (732)
T ss_pred Cce-eeecCCcccccchhhhccC-cchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhh------------
Confidence 554 4568999999999998766 68999999999999999999999999999999998887533211
Q ss_pred ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC-----HHHHhcCCCCCC
Q psy6391 250 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN-----AENALKHKYFAD 302 (313)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~e~l~h~~~~~ 302 (313)
+| ..++....++|+++-..+|++|.. +.++..|-||.+
T Consensus 640 ----~P-----------r~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~g 682 (732)
T KOG0614|consen 640 ----FP-----------RRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEG 682 (732)
T ss_pred ----cc-----------cccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhc
Confidence 11 248899999999999999999995 899999999987
No 377
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=2.4e-36 Score=277.66 Aligned_cols=279 Identities=22% Similarity=0.265 Sum_probs=181.2
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcC----CcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeecee--
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVT----GALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDT-- 81 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~----~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~-- 81 (313)
+.....++|.+.+.||+|+||.||+|.+..+ +..|++|.+...... +...+ ..+....+.++..+...
T Consensus 126 ~~~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~----e~~~~--e~l~~~~~~~~~~~~~~~~ 199 (566)
T PLN03225 126 RPSFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV----EIWMN--ERVRRACPNSCADFVYGFL 199 (566)
T ss_pred CCCCccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh----HHHHH--HHHHhhchhhHHHHHHhhh
Confidence 3445788999999999999999999999888 899999987532211 11111 11122222223222222
Q ss_pred ----EEeCcEEEEEEecccc-CHHHHHhhCCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceec
Q psy6391 82 ----MIENYRLYLIFEFMSM-DLKKYIDTVPK-----------------GQFLAADKVKSITYQIFQAILFCHKRRVLHR 139 (313)
Q Consensus 82 ----~~~~~~~~lv~e~~~~-~l~~~~~~~~~-----------------~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~ 139 (313)
...+...++|+||+++ +|.+++..... ........+..++.||+.+|.|||++||+|+
T Consensus 200 ~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHR 279 (566)
T PLN03225 200 EPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHR 279 (566)
T ss_pred cccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeC
Confidence 2355689999999985 78777764221 0112244567899999999999999999999
Q ss_pred cCCCCCEEEecCCCeEEEecCCCccccCCCC-cccccccccccccchhhhcCCC---------------------CCCcc
Q psy6391 140 DLKPQNLLIDAKSNIVKVADFGLARAFGVPV-RIYTHEVVTLWYRAPEVLLGSQ---------------------RYSCP 197 (313)
Q Consensus 140 di~~~Nil~~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~---------------------~~~~~ 197 (313)
||||+|||++.+...++|+|||++....... .......+++.|+|||.+.... .++.+
T Consensus 280 DLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k 359 (566)
T PLN03225 280 DVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDR 359 (566)
T ss_pred cCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCC
Confidence 9999999998754459999999997653221 1223456788999999763221 12345
Q ss_pred hhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhh---hhhccCCCHHHH
Q psy6391 198 VDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCL---DKHVKNLDQDGL 274 (313)
Q Consensus 198 ~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~ 274 (313)
+||||+||++|+|+++..++. .....+.+.......... .+ ............ -..+.......+
T Consensus 360 ~DVwSlGviL~el~~~~~~~~--~~~~~~~~~l~~~~~~~~----~~------~~~~~~~~~~~~~~~~~~~d~~~~~~~ 427 (566)
T PLN03225 360 FDIYSAGLIFLQMAFPNLRSD--SNLIQFNRQLKRNDYDLV----AW------RKLVEPRASPDLRRGFEVLDLDGGAGW 427 (566)
T ss_pred cccHHHHHHHHHHHhCcCCCc--hHHHHHHHHHHhcCCcHH----HH------HHhhccccchhhhhhhhhccccchHHH
Confidence 699999999999999766543 333333333322111000 00 000000000000 011122345677
Q ss_pred HHHHHHhccCCCCCCCHHHHhcCCCCCCCC
Q psy6391 275 DLLEKTLIYCPATRINAENALKHKYFADKT 304 (313)
Q Consensus 275 ~li~~~l~~dp~~Rps~~e~l~h~~~~~~~ 304 (313)
+||.+||+.||.+|||+.++|+||||++..
T Consensus 428 dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~ 457 (566)
T PLN03225 428 ELLKSMMRFKGRQRISAKAALAHPYFDREG 457 (566)
T ss_pred HHHHHHccCCcccCCCHHHHhCCcCcCCCC
Confidence 999999999999999999999999999853
No 378
>KOG4250|consensus
Probab=100.00 E-value=1.4e-37 Score=275.40 Aligned_cols=269 Identities=28% Similarity=0.418 Sum_probs=203.2
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeC------cE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIEN------YR 87 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~ 87 (313)
.-|.-.+.||+|+||.||+++++.+|+.||+|+++... ..+-.+.--+|++++++++|+|||++.++=+.. ..
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~ 91 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRL 91 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccccc
Confidence 34566788999999999999999999999999997654 222235667899999999999999999986643 35
Q ss_pred EEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCC---CeEEEecCCCc
Q psy6391 88 LYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKS---NIVKVADFGLA 163 (313)
Q Consensus 88 ~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~---~~~~l~df~~~ 163 (313)
.+++|||+.| +|...++...+...+++.++..++.++..||+|||++||+|+||||.||++-... .+-||+|||.|
T Consensus 92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 6899999985 9999999888888899999999999999999999999999999999999874332 35899999999
Q ss_pred cccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHhcCCCCCCCCC
Q psy6391 164 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEID-QLFRIFRVLTTPTEDNWP 242 (313)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 242 (313)
+..+++. .....+||..|.+||++...++++...|.||+|+++|+++||..||....... ..+.+......++.....
T Consensus 172 rel~d~s-~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i 250 (732)
T KOG4250|consen 172 RELDDNS-LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAI 250 (732)
T ss_pred ccCCCCC-eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeE
Confidence 9987664 56778999999999999755679999999999999999999999997654432 122222222222222111
Q ss_pred CCCC----CCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCC
Q psy6391 243 GVSK----LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI 289 (313)
Q Consensus 243 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp 289 (313)
..+. --++...+|. + ....+++-..+-.++..+|..+|.+|.
T Consensus 251 ~~~~~eNgpv~~s~~lP~--p---~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 251 GAQEEENGPVEWSSTLPQ--P---NHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred eeecccCCceeeeccCCC--c---ccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 1111 0112222222 0 011122334455788889999999998
No 379
>KOG1151|consensus
Probab=100.00 E-value=1.2e-37 Score=262.55 Aligned_cols=265 Identities=24% Similarity=0.429 Sum_probs=212.2
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCC-----CCchhHHHHHHHHhhcCCCCceeeceeEE-eCc
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDE-----GIPATAIREISVLKELNHPNIVQLHDTMI-ENY 86 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~ 86 (313)
-++|..+..||+|+|+.||++.+...++.||+|+-...+.+. ......-+|..+.+.++||.||++++++. +.+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 467889999999999999999999889999999876554332 22345567999999999999999999997 567
Q ss_pred EEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhC--CceeccCCCCCEEEecCC--CeEEEecCCC
Q psy6391 87 RLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKR--RVLHRDLKPQNLLIDAKS--NIVKVADFGL 162 (313)
Q Consensus 87 ~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~--~i~H~di~~~Nil~~~~~--~~~~l~df~~ 162 (313)
.++.|+||++|+-+++..+ .++.+++.+++.++-||..||.||... .|+|-||||.|||+.... +.+||+|||+
T Consensus 542 sFCTVLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred cceeeeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 8899999999965555544 456699999999999999999999976 599999999999985432 3499999999
Q ss_pred ccccCCC-------CcccccccccccccchhhhcC---CCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHh
Q psy6391 163 ARAFGVP-------VRIYTHEVVTLWYRAPEVLLG---SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRV 232 (313)
Q Consensus 163 ~~~~~~~-------~~~~~~~~~~~~~~~PE~~~~---~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~ 232 (313)
+...++. ........||.||+|||+|.- .+..+.+.||||+|+++|+++.|+.||..+.....+-+....
T Consensus 620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTI 699 (775)
T KOG1151|consen 620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTI 699 (775)
T ss_pred hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhch
Confidence 9887432 333445578999999999842 345789999999999999999999999987665554443332
Q ss_pred cCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 233 LTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
.... ...||.. +-+++++.+||++||+.--+.|..+.++-.||+|-.
T Consensus 700 lkAt--------------EVqFP~K---------PvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 700 LKAT--------------EVQFPPK---------PVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred hcce--------------eccCCCC---------CccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 2111 1112211 458999999999999999999999999999999975
No 380
>KOG0695|consensus
Probab=100.00 E-value=1e-36 Score=248.93 Aligned_cols=261 Identities=26% Similarity=0.398 Sum_probs=211.7
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCC-CCchhHHHHHHHHhhc-CCCCceeeceeEEeC
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDE-GIPATAIREISVLKEL-NHPNIVQLHDTMIEN 85 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~ 85 (313)
.+.--+++|.+++.||+|+++.|.+++++.+.+.||+|++++.-... ....=...|-.+..+- +||.+|-++..|..+
T Consensus 244 ~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqte 323 (593)
T KOG0695|consen 244 SQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTE 323 (593)
T ss_pred ccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhccc
Confidence 34456789999999999999999999999999999999998764222 1223455677777766 799999999999999
Q ss_pred cEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcc
Q psy6391 86 YRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLAR 164 (313)
Q Consensus 86 ~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~ 164 (313)
+.+++|.||++| +|.-.++. ...++++.++-....|+.||+|||++||+++|+|.+|+|++.+|. +||+|+|+++
T Consensus 324 srlffvieyv~ggdlmfhmqr---qrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaegh-ikltdygmck 399 (593)
T KOG0695|consen 324 SRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGH-IKLTDYGMCK 399 (593)
T ss_pred ceEEEEEEEecCcceeeehhh---hhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCc-eeecccchhh
Confidence 999999999987 54444443 445999999999999999999999999999999999999999998 9999999998
Q ss_pred ccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCC-------CChHHHH-HHHHHhcCCC
Q psy6391 165 AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQG-------DSEIDQL-FRIFRVLTTP 236 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~-------~~~~~~~-~~~~~~~~~~ 236 (313)
.--.+....+..+||+.|.|||.+.+.. ++.+.|.|+||++|++|+.|..||+- .+.++.+ +.+......
T Consensus 400 e~l~~gd~tstfcgtpnyiapeilrgee-ygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqir- 477 (593)
T KOG0695|consen 400 EGLGPGDTTSTFCGTPNYIAPEILRGEE-YGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIR- 477 (593)
T ss_pred cCCCCCcccccccCCCcccchhhhcccc-cCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccc-
Confidence 7544445556779999999999988755 89999999999999999999999962 1222333 333222111
Q ss_pred CCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCC------CHHHHhcCCCCCC
Q psy6391 237 TEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI------NAENALKHKYFAD 302 (313)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp------s~~e~l~h~~~~~ 302 (313)
+| ..+|-.+..+++..|++||++|. .++++.+|+||..
T Consensus 478 -----------------ip-----------rslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~ 521 (593)
T KOG0695|consen 478 -----------------IP-----------RSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRS 521 (593)
T ss_pred -----------------cc-----------ceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhh
Confidence 11 24667778999999999999997 5789999999984
No 381
>KOG0196|consensus
Probab=100.00 E-value=8.2e-37 Score=272.54 Aligned_cols=259 Identities=20% Similarity=0.314 Sum_probs=218.7
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCC---cEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTG---ALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRL 88 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~---~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 88 (313)
.-+...|.+.||.|.||.|+.|+.+..+ ..||||.++.. ..+.....|+.|+.++-+++||||+++.|+.....-.
T Consensus 627 d~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G-ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~Pv 705 (996)
T KOG0196|consen 627 DPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG-YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPV 705 (996)
T ss_pred ChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccC-ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCcee
Confidence 3455678899999999999999987554 46999999765 3344568999999999999999999999999999999
Q ss_pred EEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 89 YLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 89 ~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
.||.|||+ |+|..+++. .++.++..++..|++.|+.+++||.+.|+||+||-..|||++.+-- +|++|||++....
T Consensus 706 MIiTEyMENGsLDsFLR~--~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLv-CKVsDFGLSRvle 782 (996)
T KOG0196|consen 706 MIITEYMENGSLDSFLRQ--NDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLV-CKVSDFGLSRVLE 782 (996)
T ss_pred EEEhhhhhCCcHHHHHhh--cCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceE-EEeccccceeecc
Confidence 99999997 688888876 3455999999999999999999999999999999999999999865 9999999999875
Q ss_pred CCCcccccccc---cccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCC
Q psy6391 168 VPVRIYTHEVV---TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 168 ~~~~~~~~~~~---~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
+.........| ..+|.|||.+.-. +++.+||+||+|++|||.|+ |+-||......+.+..+...-..|++-
T Consensus 783 dd~~~~ytt~GGKIPiRWTAPEAIa~R-KFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPm---- 857 (996)
T KOG0196|consen 783 DDPEAAYTTLGGKIPIRWTAPEAIAYR-KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPM---- 857 (996)
T ss_pred cCCCccccccCCccceeecChhHhhhc-ccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCC----
Confidence 54433333333 4789999998754 49999999999999999988 999999888888888888766555543
Q ss_pred CCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc--CCCCCCC
Q psy6391 244 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK--HKYFADK 303 (313)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~--h~~~~~~ 303 (313)
.+|..+.+|+..||++|.++||.+.+|++ +..+.++
T Consensus 858 ------------------------DCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP 895 (996)
T KOG0196|consen 858 ------------------------DCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP 895 (996)
T ss_pred ------------------------CCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence 36799999999999999999999999987 4444443
No 382
>KOG4257|consensus
Probab=100.00 E-value=3.3e-36 Score=262.94 Aligned_cols=248 Identities=26% Similarity=0.418 Sum_probs=204.0
Q ss_pred ccceeeeeeccccceEEEEEEeC----cCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNK----VTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLY 89 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~----~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 89 (313)
+.....+.||+|.||.||.|... ...-.||+|+++.+....+ .+.|+.|+.+++.++||||++++|++.+. -.|
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~-tekflqEa~iMrnfdHphIikLIGv~~e~-P~W 466 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDD-TEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMW 466 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhh-HHHHHHHHHHHHhCCCcchhheeeeeecc-cee
Confidence 33445578999999999999863 2234589999987654443 69999999999999999999999999887 679
Q ss_pred EEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCC
Q psy6391 90 LIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGV 168 (313)
Q Consensus 90 lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~ 168 (313)
||||.++ |.|..+++. +...++...+...+.||+.||.|||+.++||+||-..|||+....- +||+|||++....+
T Consensus 467 ivmEL~~~GELr~yLq~--nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~C-VKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQ--NKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQC-VKLADFGLSRYLED 543 (974)
T ss_pred EEEecccchhHHHHHHh--ccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcce-eeecccchhhhccc
Confidence 9999998 688888886 3445888889999999999999999999999999999999999877 99999999988754
Q ss_pred CCcccccccc--cccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCC
Q psy6391 169 PVRIYTHEVV--TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 245 (313)
Q Consensus 169 ~~~~~~~~~~--~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
..- +....| ..-|||||.+.- ..++.+||+|-||++||+++. |..||.+-...+.+-.+.++...|-++
T Consensus 544 ~~y-YkaS~~kLPIKWmaPESINf-RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~------ 615 (974)
T KOG4257|consen 544 DAY-YKASRGKLPIKWMAPESINF-RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPP------ 615 (974)
T ss_pred cch-hhccccccceeecCccccch-hcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCC------
Confidence 321 111122 456999998854 348999999999999999988 999999887777776666655555444
Q ss_pred CCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 246 KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
.+|+.+..++.+||..+|.+||.+.++..
T Consensus 616 ----------------------nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 616 ----------------------NCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred ----------------------CCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 46799999999999999999998877654
No 383
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.2e-34 Score=260.46 Aligned_cols=279 Identities=19% Similarity=0.312 Sum_probs=187.8
Q ss_pred chhhhhhccceeeeeeccccceEEEEEEeC----------------cCCcEEEEEEecccCCCC------------CCch
Q psy6391 7 DDVKSRLEDYEKVEKIGEGTYGVVYKAKNK----------------VTGALVAIKKIRMENDDE------------GIPA 58 (313)
Q Consensus 7 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~----------------~~~~~~~~K~~~~~~~~~------------~~~~ 58 (313)
.+.+...++|.+.++||+|+||.||+|... ..++.|++|.+....... ...+
T Consensus 138 ~~~r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e 217 (507)
T PLN03224 138 ANSRWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAE 217 (507)
T ss_pred CCCCccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccc
Confidence 345667899999999999999999999642 235679999986543211 1112
Q ss_pred hHHHHHHHHhhcCCCC-----ceeeceeEEe--------CcEEEEEEecccc-CHHHHHhhCCC----------------
Q psy6391 59 TAIREISVLKELNHPN-----IVQLHDTMIE--------NYRLYLIFEFMSM-DLKKYIDTVPK---------------- 108 (313)
Q Consensus 59 ~~~~e~~~l~~l~~~~-----i~~~~~~~~~--------~~~~~lv~e~~~~-~l~~~~~~~~~---------------- 108 (313)
....|+.++.+++|.+ ++++++++.. .+..++|+||+++ +|.+++.....
T Consensus 218 ~~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l 297 (507)
T PLN03224 218 TGMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKI 297 (507)
T ss_pred hhHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCch
Confidence 3344667777775554 3667777653 3468999999985 88777753210
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc-cccccccccc
Q psy6391 109 -----GQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI-YTHEVVTLWY 182 (313)
Q Consensus 109 -----~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~ 182 (313)
...+++..++.++.|++.+|.|||+.+++|+||||+||+++.++. ++|+|||++......... .....+++.|
T Consensus 298 ~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~-~kL~DFGla~~~~~~~~~~~~~g~~tp~Y 376 (507)
T PLN03224 298 PDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQ-VKIIDFGAAVDMCTGINFNPLYGMLDPRY 376 (507)
T ss_pred hhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCc-EEEEeCcCccccccCCccCccccCCCcce
Confidence 122456788899999999999999999999999999999998876 999999998654322111 1112347889
Q ss_pred cchhhhcCCCC---------------------CCcchhHhHHHHHHHHHHhCCC-CCCCCChHHHHHHHHHhcCCCCCCC
Q psy6391 183 RAPEVLLGSQR---------------------YSCPVDVWSIGCIFAEIATRKP-LFQGDSEIDQLFRIFRVLTTPTEDN 240 (313)
Q Consensus 183 ~~PE~~~~~~~---------------------~~~~~Di~slG~~l~~ll~g~~-pf~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
+|||.+..... .....|+||+||++|+|++|.. ||..........+... ..
T Consensus 377 ~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~-------~~ 449 (507)
T PLN03224 377 SPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYD-------ND 449 (507)
T ss_pred eChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhcc-------ch
Confidence 99998753210 1134799999999999999885 6653221111000000 00
Q ss_pred CCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCC---CCCCCHHHHhcCCCCCC
Q psy6391 241 WPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCP---ATRINAENALKHKYFAD 302 (313)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp---~~Rps~~e~l~h~~~~~ 302 (313)
...+.........+. .++.+++..++|+.+||..+| .+|+|+.|+|+||||..
T Consensus 450 ~~~~r~~~~~~~~~~---------~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 450 LNRWRMYKGQKYDFS---------LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred HHHHHhhcccCCCcc---------cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 000000000000011 124578999999999999866 68999999999999975
No 384
>KOG0199|consensus
Probab=100.00 E-value=3.8e-36 Score=265.43 Aligned_cols=259 Identities=27% Similarity=0.388 Sum_probs=215.3
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcC---CcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcE
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVT---GALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYR 87 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~---~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 87 (313)
+-.++..+.++||+|+||.|++|.+..- -..||||.++.+.... ....|.+|+.++.+++|+|+++++|+..+ ..
T Consensus 107 Ipee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~-qp 184 (1039)
T KOG0199|consen 107 IPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD-QP 184 (1039)
T ss_pred ccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-ch
Confidence 3345667789999999999999998532 3368999998776554 46899999999999999999999999988 57
Q ss_pred EEEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 88 LYLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 88 ~~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
..+|+|.+. |+|++.+.. .....+.-..+..++.||+.|+.||.++++||+||-..|+++-.... +||+|||++..+
T Consensus 185 ~mMV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprt-VKI~DFGLmRaL 262 (1039)
T KOG0199|consen 185 AMMVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRT-VKICDFGLMRAL 262 (1039)
T ss_pred hhHHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccce-eeeecccceecc
Confidence 889999998 589888887 45556888899999999999999999999999999999999988655 999999999988
Q ss_pred CCCCccccccc---ccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCC
Q psy6391 167 GVPVRIYTHEV---VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 242 (313)
Q Consensus 167 ~~~~~~~~~~~---~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
+.+...+.... -...|+|||.+...+ ++.+||+|++|+++|||++ |+.||.+.....+++++-.....+.+
T Consensus 263 g~ned~Yvm~p~rkvPfAWCaPEsLrh~k-FShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRP---- 337 (1039)
T KOG0199|consen 263 GENEDMYVMAPQRKVPFAWCAPESLRHRK-FSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRP---- 337 (1039)
T ss_pred CCCCcceEecCCCcCcccccCHhHhcccc-ccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCC----
Confidence 76655432111 146699999997654 9999999999999999999 88999999988888777643333222
Q ss_pred CCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 243 GVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
..+|+++.++++.||..+|.+||++..|.+.-++.+
T Consensus 338 ------------------------k~csedIY~imk~cWah~paDRptFsair~~~~l~e 373 (1039)
T KOG0199|consen 338 ------------------------KYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAE 373 (1039)
T ss_pred ------------------------CCChHHHHHHHHHhccCCccccccHHHHHHhHHHHh
Confidence 247899999999999999999999999976555444
No 385
>KOG0664|consensus
Probab=100.00 E-value=1.2e-37 Score=247.65 Aligned_cols=277 Identities=38% Similarity=0.646 Sum_probs=223.4
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc-----EE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENY-----RL 88 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~ 88 (313)
.+.+-.+.||.|+||.||.+++..+|+.|++|.+..-...-.....+.+|+.++.-++|.|++..+++..... .+
T Consensus 53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 3455678999999999999999999999999988655444444578889999999999999999999876442 46
Q ss_pred EEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCC
Q psy6391 89 YLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGV 168 (313)
Q Consensus 89 ~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~ 168 (313)
|+++|.+..+|..++-. .+.++.+.++-+++||+.+|.|||+.||.|+||||.|.|++.+-- +||+|||++...+.
T Consensus 133 YV~TELmQSDLHKIIVS---PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCv-LKICDFGLARvee~ 208 (449)
T KOG0664|consen 133 YVLTELMQSDLHKIIVS---PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCI-LKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHHHhhhhheecc---CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCce-EEecccccccccch
Confidence 78889988887776653 456999999999999999999999999999999999999999865 99999999987754
Q ss_pred C-CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCC
Q psy6391 169 P-VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 247 (313)
Q Consensus 169 ~-~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
. ...++..+-|-.|.+||.+.+...++.+.||||.||++.+++..+..|..-.+.++++.+....+.|..+.+-
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr----- 283 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMK----- 283 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHH-----
Confidence 3 3345566778899999999999999999999999999999999999999999999988888877776543221
Q ss_pred CCccccCCCCchhhhh--------hhccC------CCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 248 PDYKTTFPEWSNFCLD--------KHVKN------LDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 248 ~~~~~~~~~~~~~~~~--------~~~~~------~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
..+.......+. ..+.. -.-+...++..++.+||+.|.+..+.+.|+++-+.
T Consensus 284 ----~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~ 349 (449)
T KOG0664|consen 284 ----YACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEG 349 (449)
T ss_pred ----HHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccccc
Confidence 111000000000 01111 23467789999999999999999999999998764
No 386
>KOG1094|consensus
Probab=100.00 E-value=2.7e-35 Score=255.44 Aligned_cols=257 Identities=23% Similarity=0.321 Sum_probs=207.5
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
-+...+.++||+|.||.|.++.-. .+..||+|.++....... ...|.+|+.+|.+++||||+.++++|..++.+++|+
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~-r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~ 614 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNA-RNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMIT 614 (807)
T ss_pred hhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhH-HHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHH
Confidence 345678899999999999999865 368999999987653332 478999999999999999999999999999999999
Q ss_pred eccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccC--CC
Q psy6391 93 EFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG--VP 169 (313)
Q Consensus 93 e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~--~~ 169 (313)
||++ |+|.+++....... +......+++.||+++++||.+.++||+|+-+.|+|++.+.+ +||+|||++...- +-
T Consensus 615 EYmEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~-iKiadfgmsR~lysg~y 692 (807)
T KOG1094|consen 615 EYMENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFT-IKIADFGMSRNLYSGDY 692 (807)
T ss_pred HHHhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCccc-EEecCcccccccccCCc
Confidence 9998 68888887753322 456667789999999999999999999999999999999988 9999999998553 22
Q ss_pred CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCC
Q psy6391 170 VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT--RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 247 (313)
Q Consensus 170 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
.+.....+-..+|||+|.+..++ ++.+||+|++|+++|++++ .+.||....+++..+..-........+...-
T Consensus 693 y~vqgr~vlpiRwmawEsillgk-FttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~---- 767 (807)
T KOG1094|consen 693 YRVQGRAVLPIRWMAWESILLGK-FTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLS---- 767 (807)
T ss_pred eeeecceeeeeeehhHHHHHhcc-ccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceecc----
Confidence 33333345578899999998655 9999999999999999876 7789998877776665544332222221110
Q ss_pred CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHh
Q psy6391 248 PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENAL 295 (313)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l 295 (313)
..+.++..+.+++.+||..+-.+||+++++-
T Consensus 768 -----------------~P~~cp~~lyelml~Cw~~es~~RPsFe~lh 798 (807)
T KOG1094|consen 768 -----------------RPPACPQGLYELMLRCWRRESEQRPSFEQLH 798 (807)
T ss_pred -----------------CCCcCcHHHHHHHHHHhchhhhcCCCHHHHH
Confidence 1135789999999999999999999999984
No 387
>KOG0608|consensus
Probab=100.00 E-value=6.5e-36 Score=261.53 Aligned_cols=258 Identities=28% Similarity=0.450 Sum_probs=206.3
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccC-CCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEN-DDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
-|..++.||-|+||.|.++....+...||+|.+++.. .........+.|-.||..-+.+-||+++..|.+.+.+|+||+
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 4778899999999999999988889999999997654 233345677788899999999999999999999999999999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC---
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP--- 169 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~--- 169 (313)
|++| ++.+++- ..+.+++..++-.+..+..|+++.|..|++|+||||+|||+|.+|. +||+|||+++-....
T Consensus 710 YIPGGDmMSLLI---rmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGH-IKLTDFGLCTGfRWTHds 785 (1034)
T KOG0608|consen 710 YIPGGDMMSLLI---RMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLCTGFRWTHDS 785 (1034)
T ss_pred ccCCccHHHHHH---HhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCc-eeeeeccccccceecccc
Confidence 9987 5555554 3556899999999999999999999999999999999999999998 999999998543110
Q ss_pred ---------------------------------------CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHH
Q psy6391 170 ---------------------------------------VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 210 (313)
Q Consensus 170 ---------------------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l 210 (313)
.......+||+.|+|||++...+ ++...|.||.|++||+|
T Consensus 786 kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g-~~q~cdwws~gvil~em 864 (1034)
T KOG0608|consen 786 KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTG-YTQLCDWWSVGVILYEM 864 (1034)
T ss_pred ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccC-ccccchhhHhhHHHHHH
Confidence 11112346799999999997655 89999999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCC-
Q psy6391 211 ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI- 289 (313)
Q Consensus 211 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp- 289 (313)
+.|+.||....+...-.++.+ |.+ +-. ++. ..++|.++.++|.++..- ++.|.
T Consensus 865 ~~g~~pf~~~tp~~tq~kv~n---------w~~---~l~----~~~---------~~~ls~e~~~li~kLc~s-ad~RLG 918 (1034)
T KOG0608|consen 865 LVGQPPFLADTPGETQYKVIN---------WRN---FLH----IPY---------QGNLSKEALDLIQKLCCS-ADSRLG 918 (1034)
T ss_pred hhCCCCccCCCCCcceeeeee---------hhh---ccc----ccc---------ccccCHHHHHHHHHHhcC-hhhhhc
Confidence 999999998877655444432 100 000 000 135899999999876653 66666
Q ss_pred --CHHHHhcCCCCCCC
Q psy6391 290 --NAENALKHKYFADK 303 (313)
Q Consensus 290 --s~~e~l~h~~~~~~ 303 (313)
-++++.+||||+..
T Consensus 919 kng~d~vKaHpfFkgI 934 (1034)
T KOG0608|consen 919 KNGADQVKAHPFFKGI 934 (1034)
T ss_pred ccchhhhhcCcccccc
Confidence 57789999999983
No 388
>KOG0665|consensus
Probab=100.00 E-value=4.6e-36 Score=243.14 Aligned_cols=280 Identities=34% Similarity=0.525 Sum_probs=222.7
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc------
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENY------ 86 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------ 86 (313)
-.+|.-++.+|.|.- .|-.+.+...++.+++|............++..+|+..+..+.|+||++.+.+|....
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 357888899999998 7888888889999999988766555555678889999999999999999999987443
Q ss_pred EEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 87 RLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 87 ~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
..|+|||++..+|...+.. .+....+..++.|++.|+++||+.||+|+||||+||++..+.. +||.|||++...
T Consensus 95 e~y~v~e~m~~nl~~vi~~-----elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~-lKi~dfg~ar~e 168 (369)
T KOG0665|consen 95 EVYLVMELMDANLCQVILM-----ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCT-LKILDFGLARTE 168 (369)
T ss_pred hHHHHHHhhhhHHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhh-eeeccchhhccc
Confidence 5799999999998887763 2677889999999999999999999999999999999999877 999999999876
Q ss_pred CCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy6391 167 GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 246 (313)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
+.. -.++..+.+..|.|||++.+.+ +....||||+||++.+|++|+..|.+.+..++..++....+.|.+.-..++..
T Consensus 169 ~~~-~~mtpyVvtRyyrapevil~~~-~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~ 246 (369)
T KOG0665|consen 169 DTD-FMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQP 246 (369)
T ss_pred Ccc-cccCchhheeeccCchheeccC-CcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhH
Confidence 544 3445667889999999998776 89999999999999999999999999888888888887777666544333222
Q ss_pred CCC-------------ccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCC
Q psy6391 247 LPD-------------YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA 301 (313)
Q Consensus 247 ~~~-------------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~ 301 (313)
... |...+++..=.......+.-+..+.+++.+||..||++|.+++++|+||||+
T Consensus 247 ~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 247 TVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred HHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 111 1111111100000000012356778999999999999999999999999997
No 389
>KOG4278|consensus
Probab=100.00 E-value=6.4e-35 Score=255.00 Aligned_cols=255 Identities=27% Similarity=0.391 Sum_probs=208.8
Q ss_pred chhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCc
Q psy6391 7 DDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENY 86 (313)
Q Consensus 7 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 86 (313)
++|.-+-.+.....+||.|.+|.||.|.++.-.-.||+|.++.+... .+.|+.|+.+++.++|||+|+++|+|..+.
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe---veEFLkEAAvMKeikHpNLVqLLGVCT~Ep 336 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTHEP 336 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchh---HHHHHHHHHHHHhhcCccHHHHhhhhccCC
Confidence 44444455556668899999999999999988888999999877655 488999999999999999999999999999
Q ss_pred EEEEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 87 RLYLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 87 ~~~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
-+|||+|||. |+|+++++..... -++.-.+..++.||.+|+.||..++++|+||-..|+|+.++ .++|++|||++..
T Consensus 337 PFYIiTEfM~yGNLLdYLRecnr~-ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEn-hiVKvADFGLsRl 414 (1157)
T KOG4278|consen 337 PFYIITEFMCYGNLLDYLRECNRS-EVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN-HIVKVADFGLSRL 414 (1157)
T ss_pred CeEEEEecccCccHHHHHHHhchh-hcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccccc-ceEEeeccchhhh
Confidence 9999999997 7999999876443 37788889999999999999999999999999999999877 5699999999988
Q ss_pred cCC-CCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCC
Q psy6391 166 FGV-PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 166 ~~~-~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
... ........-...-|.|||.+.- ..++.++|+|+||++||++.| |-.||.+.+..+.+....+..
T Consensus 415 MtgDTYTAHAGAKFPIKWTAPEsLAy-NtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgy---------- 483 (1157)
T KOG4278|consen 415 MTGDTYTAHAGAKFPIKWTAPESLAY-NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGY---------- 483 (1157)
T ss_pred hcCCceecccCccCcccccCcccccc-cccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccc----------
Confidence 632 2222222222566999998754 458999999999999999999 778888876655555544321
Q ss_pred CCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHh
Q psy6391 244 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENAL 295 (313)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l 295 (313)
+.+-| .++|+.+.+|++.||+++|..||+++|+-
T Consensus 484 -------RM~~P-----------eGCPpkVYeLMraCW~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 484 -------RMDGP-----------EGCPPKVYELMRACWNWSPSDRPSFAEIH 517 (1157)
T ss_pred -------cccCC-----------CCCCHHHHHHHHHHhcCCcccCccHHHHH
Confidence 11222 26899999999999999999999998874
No 390
>KOG1027|consensus
Probab=100.00 E-value=4.2e-36 Score=269.95 Aligned_cols=248 Identities=28% Similarity=0.387 Sum_probs=192.1
Q ss_pred eeeeccccceE-EEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcEEEEEEeccc
Q psy6391 19 VEKIGEGTYGV-VYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIENYRLYLIFEFMS 96 (313)
Q Consensus 19 ~~~lg~g~~~~-v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~ 96 (313)
.+.+|.|+.|+ ||+|... ++.||||++-... .....+|+..++.- .||||+++++.=.++.+.||..|.|.
T Consensus 514 ~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e~-----~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~ 586 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVYE--GREVAVKRLLEEF-----FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA 586 (903)
T ss_pred HHHcccCCCCcEEEEEeeC--CceehHHHHhhHh-----HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence 35688999964 9999886 8899999875432 34567899999998 69999999999999999999999999
Q ss_pred cCHHHHHhhC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEec---CC-CeEEEecCCCccccCCCCc
Q psy6391 97 MDLKKYIDTV-PKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDA---KS-NIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 97 ~~l~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~---~~-~~~~l~df~~~~~~~~~~~ 171 (313)
.+|.++++.. ...........+.+..|++.||++||+.+|||+||||+|||++. ++ ..++|+|||+++.+....+
T Consensus 587 ~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~s 666 (903)
T KOG1027|consen 587 CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKS 666 (903)
T ss_pred hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcc
Confidence 9999999873 11111222456788899999999999999999999999999987 23 4599999999998855433
Q ss_pred ---ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCC
Q psy6391 172 ---IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 247 (313)
Q Consensus 172 ---~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
......||.+|+|||.+.... .+.+.|||||||++|..++| .+||......+ ..+.+. -.++..+
T Consensus 667 S~~r~s~~sGt~GW~APE~L~~~~-~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--~NIl~~--------~~~L~~L 735 (903)
T KOG1027|consen 667 SFSRLSGGSGTSGWQAPEQLREDR-KTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--ANILTG--------NYTLVHL 735 (903)
T ss_pred hhhcccCCCCcccccCHHHHhccc-cCcccchhhcCceEEEEecCCccCCCchHHhh--hhhhcC--------ccceeee
Confidence 344567899999999997655 57799999999999999986 89998643211 111111 0011111
Q ss_pred CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 248 PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
. +.-..++.+||.+|++++|..||+|.++|.||+|=.
T Consensus 736 ~------------------~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~ 772 (903)
T KOG1027|consen 736 E------------------PLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWD 772 (903)
T ss_pred c------------------cCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCC
Confidence 0 011128899999999999999999999999999954
No 391
>KOG1167|consensus
Probab=100.00 E-value=3e-35 Score=246.58 Aligned_cols=287 Identities=27% Similarity=0.473 Sum_probs=218.9
Q ss_pred chhhhhhccceeeeeeccccceEEEEEEeCc---CCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeE
Q psy6391 7 DDVKSRLEDYEKVEKIGEGTYGVVYKAKNKV---TGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTM 82 (313)
Q Consensus 7 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~ 82 (313)
+.++...+.|.++.+||+|.|++||++.+.. ..+.|++|.+.... ....+.+|+++|..+ .+.||+++.+.+
T Consensus 29 q~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts----~p~ri~~El~~L~~~gG~~ni~~~~~~~ 104 (418)
T KOG1167|consen 29 QDIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS----SPSRILNELEMLYRLGGSDNIIKLNGCF 104 (418)
T ss_pred hhhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc----CchHHHHHHHHHHHhccchhhhcchhhh
Confidence 4567777889999999999999999999876 68899999886432 346799999999999 699999999999
Q ss_pred EeCcEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCC
Q psy6391 83 IENYRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFG 161 (313)
Q Consensus 83 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~ 161 (313)
..+++..+|+||++. ...++... ++...++..++.++.||.++|.+||+|+||||+|++++...+.-.|+|||
T Consensus 105 rnnd~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFg 178 (418)
T KOG1167|consen 105 RNNDQVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFG 178 (418)
T ss_pred ccCCeeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEech
Confidence 999999999999986 66666655 67888999999999999999999999999999999999988889999999
Q ss_pred CccccC---------C-----------------------------------CCcccccccccccccchhhhcCCCCCCcc
Q psy6391 162 LARAFG---------V-----------------------------------PVRIYTHEVVTLWYRAPEVLLGSQRYSCP 197 (313)
Q Consensus 162 ~~~~~~---------~-----------------------------------~~~~~~~~~~~~~~~~PE~~~~~~~~~~~ 197 (313)
++...+ . .........||++|.|||++...+.-+.+
T Consensus 179 LA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtta 258 (418)
T KOG1167|consen 179 LAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTA 258 (418)
T ss_pred hHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCc
Confidence 986110 0 00011123568999999999888888999
Q ss_pred hhHhHHHHHHHHHHhCCCCCCC-CChHHHHHHHHHhcCCCCCC----------CCC--CCCCCCCccccCCCCc-hhhhh
Q psy6391 198 VDVWSIGCIFAEIATRKPLFQG-DSEIDQLFRIFRVLTTPTED----------NWP--GVSKLPDYKTTFPEWS-NFCLD 263 (313)
Q Consensus 198 ~Di~slG~~l~~ll~g~~pf~~-~~~~~~~~~~~~~~~~~~~~----------~~~--~~~~~~~~~~~~~~~~-~~~~~ 263 (313)
.||||.|+++..++++..||-. .++.+.+.++....+..... .|. +....++.+..+.... ..+.+
T Consensus 259 iDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~ 338 (418)
T KOG1167|consen 259 IDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYK 338 (418)
T ss_pred cceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccc
Confidence 9999999999999999998754 34444444444332221111 111 1111222222222221 11111
Q ss_pred ---------hhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 264 ---------KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 264 ---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
......+..+.+|+.+||..||.+|.|++++|.||||.+.
T Consensus 339 ~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 339 SRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred ccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 1124467799999999999999999999999999999964
No 392
>KOG1152|consensus
Probab=100.00 E-value=1.2e-34 Score=251.23 Aligned_cols=206 Identities=31% Similarity=0.440 Sum_probs=179.7
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC------CCCCchhHHHHHHHHhhcC---CCCceee
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND------DEGIPATAIREISVLKELN---HPNIVQL 78 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~------~~~~~~~~~~e~~~l~~l~---~~~i~~~ 78 (313)
.....+.+|..+++||+|+||.|+.+.++.+...|++|.+.+.+- ..+....+..|+++|..++ |+||+++
T Consensus 555 ~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKl 634 (772)
T KOG1152|consen 555 KEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKL 634 (772)
T ss_pred eeecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhh
Confidence 344567889999999999999999999999999999999877641 1223356778999999996 9999999
Q ss_pred ceeEEeCcEEEEEEecccc--CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEE
Q psy6391 79 HDTMIENYRLYLIFEFMSM--DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVK 156 (313)
Q Consensus 79 ~~~~~~~~~~~lv~e~~~~--~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~ 156 (313)
+++|++++++|++||..+. +|.++++..+ .+++.++..++.|+..++++||+.||+|+|||-+|+.++.+|- +|
T Consensus 635 LdfFEddd~yyl~te~hg~gIDLFd~IE~kp---~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~-~k 710 (772)
T KOG1152|consen 635 LDFFEDDDYYYLETEVHGEGIDLFDFIEFKP---RMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGF-VK 710 (772)
T ss_pred hheeecCCeeEEEecCCCCCcchhhhhhccC---ccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCe-EE
Confidence 9999999999999998874 6667776643 4999999999999999999999999999999999999999987 99
Q ss_pred EecCCCccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCC
Q psy6391 157 VADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQG 219 (313)
Q Consensus 157 l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~ 219 (313)
|+|||.+.....+ .....+||..|.|||++.+.++.+...|||+||+++|-++..+.||..
T Consensus 711 lidfgsaa~~ksg--pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 711 LIDFGSAAYTKSG--PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred EeeccchhhhcCC--CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 9999999776543 224568999999999999988889999999999999999999999863
No 393
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.5e-33 Score=277.49 Aligned_cols=258 Identities=23% Similarity=0.334 Sum_probs=186.7
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcE
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYR 87 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 87 (313)
........+.....||+|++|.||+|.+..++..||+|.+..... ....|+..+++++||||+++++++.+++.
T Consensus 684 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~ 757 (968)
T PLN00113 684 TINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS------IPSSEIADMGKLQHPNIVKLIGLCRSEKG 757 (968)
T ss_pred hHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc------ccHHHHHHHhhCCCCCcceEEEEEEcCCC
Confidence 344456678888899999999999999988999999998864321 22356889999999999999999999999
Q ss_pred EEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCCCCEEEecCCCeEEEecCCCc
Q psy6391 88 LYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCH---KRRVLHRDLKPQNLLIDAKSNIVKVADFGLA 163 (313)
Q Consensus 88 ~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh---~~~i~H~di~~~Nil~~~~~~~~~l~df~~~ 163 (313)
.++||||+++ +|.+++.. +++..+..++.||+.|++||| +.+++|+||||+||+++.++. .++. ++..
T Consensus 758 ~~lv~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~-~~~~-~~~~ 829 (968)
T PLN00113 758 AYLIHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDE-PHLR-LSLP 829 (968)
T ss_pred CEEEEeCCCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCc-eEEE-eccc
Confidence 9999999985 88888753 788999999999999999999 669999999999999987765 5554 4443
Q ss_pred cccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHhcCC-CCCCCC
Q psy6391 164 RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI-DQLFRIFRVLTT-PTEDNW 241 (313)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-~~~~~~~~~~~~-~~~~~~ 241 (313)
...... ....++..|+|||.+.+. .++.++||||+|+++|+|++|+.||...... ............ .....+
T Consensus 830 ~~~~~~----~~~~~t~~y~aPE~~~~~-~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 904 (968)
T PLN00113 830 GLLCTD----TKCFISSAYVAPETRETK-DITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMW 904 (968)
T ss_pred cccccC----CCccccccccCcccccCC-CCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhhe
Confidence 222111 223568889999988754 4899999999999999999999999643211 111111111000 000000
Q ss_pred CCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 242 PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
.+ +....... .. .....++.+++.+|++.||++||++.|+++.
T Consensus 905 ~~----~~~~~~~~-~~--------~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 905 ID----PSIRGDVS-VN--------QNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred eC----ccccCCCC-cc--------HHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 00 00000000 00 0122467789999999999999999999863
No 394
>KOG0984|consensus
Probab=100.00 E-value=1.8e-34 Score=220.59 Aligned_cols=215 Identities=27% Similarity=0.502 Sum_probs=179.2
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcEEEEEE
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
++...+..||+|++|.|-+.++..+|...|+|.++..-..+. ..+.+.|+.+..+. .+|.+|.++|.+.++...++.|
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~-q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM 124 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQE-QKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM 124 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHH-HHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence 445567889999999999999999999999999876544332 36677888887776 7999999999999999999999
Q ss_pred eccccCHHHHHhh-CCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCCEEEecCCCeEEEecCCCccccCCCC
Q psy6391 93 EFMSMDLKKYIDT-VPKGQFLAADKVKSITYQIFQAILFCHKR-RVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV 170 (313)
Q Consensus 93 e~~~~~l~~~~~~-~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~-~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~ 170 (313)
|.+..+|..+... +..++.+++..+-+++..++.||.+||++ .++|+|+||+|||++.+|. +|+||||.+..+.++.
T Consensus 125 E~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~Gq-VKiCDFGIsG~L~dSi 203 (282)
T KOG0984|consen 125 ELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQ-VKICDFGISGYLVDSI 203 (282)
T ss_pred HHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCc-EEEcccccceeehhhh
Confidence 9999998877655 45677899999999999999999999976 8999999999999999998 9999999997765543
Q ss_pred cccccccccccccchhhhcC---CCCCCcchhHhHHHHHHHHHHhCCCCCCC-CChHHHHHHHHH
Q psy6391 171 RIYTHEVVTLWYRAPEVLLG---SQRYSCPVDVWSIGCIFAEIATRKPLFQG-DSEIDQLFRIFR 231 (313)
Q Consensus 171 ~~~~~~~~~~~~~~PE~~~~---~~~~~~~~Di~slG~~l~~ll~g~~pf~~-~~~~~~~~~~~~ 231 (313)
.. +...|-..|+|||.+.. ...++.+|||||||+++.+|.++..||.. ..+.+++.++..
T Consensus 204 Ak-t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe 267 (282)
T KOG0984|consen 204 AK-TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE 267 (282)
T ss_pred HH-HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence 32 22456778999999843 23589999999999999999999999974 355566555554
No 395
>KOG2052|consensus
Probab=100.00 E-value=1.1e-32 Score=232.32 Aligned_cols=248 Identities=21% Similarity=0.298 Sum_probs=186.7
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc--CCCCceeeceeEEeC----c
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL--NHPNIVQLHDTMIEN----Y 86 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l--~~~~i~~~~~~~~~~----~ 86 (313)
-++..+++.||+|.||.||+|.++ |+.||||++.... .+...+|.++.+.. +|+||+.+++.=..+ .
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd-----E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T 282 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD-----ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT 282 (513)
T ss_pred hheeEEEEEecCccccceeecccc--CCceEEEEecccc-----hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence 357788999999999999999998 8899999996432 25567888888775 999999999976533 3
Q ss_pred EEEEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CceeccCCCCCEEEecCCCeEEE
Q psy6391 87 RLYLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKR--------RVLHRDLKPQNLLIDAKSNIVKV 157 (313)
Q Consensus 87 ~~~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~--------~i~H~di~~~Nil~~~~~~~~~l 157 (313)
++++|++|.+ |+|.++++. ..++.+.+..++..++.||++||.. .|+|+|||+.||||.+++. .-|
T Consensus 283 QLwLvTdYHe~GSL~DyL~r----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~-C~I 357 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLNR----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT-CCI 357 (513)
T ss_pred EEEEeeecccCCcHHHHHhh----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCc-EEE
Confidence 7899999997 799999986 3488999999999999999999953 3999999999999999987 999
Q ss_pred ecCCCccccCCC----CcccccccccccccchhhhcCCCCC-----CcchhHhHHHHHHHHHHh----------CCCCCC
Q psy6391 158 ADFGLARAFGVP----VRIYTHEVVTLWYRAPEVLLGSQRY-----SCPVDVWSIGCIFAEIAT----------RKPLFQ 218 (313)
Q Consensus 158 ~df~~~~~~~~~----~~~~~~~~~~~~~~~PE~~~~~~~~-----~~~~Di~slG~~l~~ll~----------g~~pf~ 218 (313)
+|+|+|...... .-.....+||.+|||||++...... =..+||||||.++||++. -+.||.
T Consensus 358 ADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyy 437 (513)
T KOG2052|consen 358 ADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYY 437 (513)
T ss_pred eeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcc
Confidence 999999765332 2233456899999999998654321 247999999999999987 246665
Q ss_pred CCCh-----HHHHHHHHH-hcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHH
Q psy6391 219 GDSE-----IDQLFRIFR-VLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAE 292 (313)
Q Consensus 219 ~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 292 (313)
.-.+ +++...+.. ...++.++-|... ..=..+..+++.||..||.-|.|+-
T Consensus 438 d~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~-----------------------~~l~~m~klMkeCW~~Np~aRltAL 494 (513)
T KOG2052|consen 438 DVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSD-----------------------PALRVMAKLMKECWYANPAARLTAL 494 (513)
T ss_pred cCCCCCCCHHHHhcceeecccCCCCCcccccC-----------------------HHHHHHHHHHHHhhcCCchhhhHHH
Confidence 4321 222221111 2222222222211 0114566889999999999999987
Q ss_pred HHh
Q psy6391 293 NAL 295 (313)
Q Consensus 293 e~l 295 (313)
.+.
T Consensus 495 riK 497 (513)
T KOG2052|consen 495 RIK 497 (513)
T ss_pred HHH
Confidence 664
No 396
>KOG0576|consensus
Probab=100.00 E-value=7.1e-34 Score=249.94 Aligned_cols=263 Identities=25% Similarity=0.437 Sum_probs=225.7
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEE
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYL 90 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 90 (313)
.=-++|+.+..+|.|.+|.||+++++.+++..++|+++...... -.-+..|+-+++..+|+||+.+++.|...+..++
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd--~~~iqqei~~~~dc~h~nivay~gsylr~dklwi 89 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD--FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWI 89 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc--ccccccceeeeecCCCcChHHHHhhhhhhcCcEE
Confidence 44578999999999999999999999999999999998876443 3567789999999999999999999999999999
Q ss_pred EEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC
Q psy6391 91 IFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP 169 (313)
Q Consensus 91 v~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~ 169 (313)
.|||++| +|.+... -.+++++.++..+++..+.+++|||+.|-+|+|||-.||+++..|. +++.|||.+..++..
T Consensus 90 cMEycgggslQdiy~---~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gD-vklaDfgvsaqitat 165 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYH---VTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGD-VKLADFGVSAQITAT 165 (829)
T ss_pred EEEecCCCcccceee---ecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCc-eeecccCchhhhhhh
Confidence 9999986 6555544 4667999999999999999999999999999999999999999988 999999999988777
Q ss_pred Ccccccccccccccchhhh--cCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCC
Q psy6391 170 VRIYTHEVVTLWYRAPEVL--LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 247 (313)
Q Consensus 170 ~~~~~~~~~~~~~~~PE~~--~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
........||+.|||||+- .....+....|||++|+...++-..+.|.....+......+.+....|+.....
T Consensus 166 i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk----- 240 (829)
T KOG0576|consen 166 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDK----- 240 (829)
T ss_pred hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCC-----
Confidence 7777788999999999985 223458899999999999999999999888777766666666544444322111
Q ss_pred CCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 248 PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
..=++.+.+|++.+|.++|.+||+++.+|.|||..+.
T Consensus 241 -------------------~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 241 -------------------TKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred -------------------ccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 2346889999999999999999999999999999985
No 397
>KOG3653|consensus
Probab=100.00 E-value=5.2e-33 Score=236.00 Aligned_cols=246 Identities=25% Similarity=0.329 Sum_probs=186.9
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc--CCCCceeeceeEEeCc---
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL--NHPNIVQLHDTMIENY--- 86 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l--~~~~i~~~~~~~~~~~--- 86 (313)
.+...+..+.+|+|.||.||+|... ++.||||++..+. .+.+.+|-.+.... .|+||+++++.-+...
T Consensus 208 ~l~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~~-----kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~ 280 (534)
T KOG3653|consen 208 ELDPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQE-----KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADR 280 (534)
T ss_pred cCCchhhHHHhhcCccceeehhhcc--CceeEEEecCHHH-----HHHHHhHHHHHhccCccchhHHHhhchhccCCccc
Confidence 3566678889999999999999886 7899999998654 35677787777765 7999999999876554
Q ss_pred -EEEEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---------CceeccCCCCCEEEecCCCeE
Q psy6391 87 -RLYLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKR---------RVLHRDLKPQNLLIDAKSNIV 155 (313)
Q Consensus 87 -~~~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~---------~i~H~di~~~Nil~~~~~~~~ 155 (313)
.+++|++|.+ |+|.+++.. ..+++....+++..++.||+|||+. .|+|+|||+.|||+..+.. .
T Consensus 281 ~eywLVt~fh~kGsL~dyL~~----ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlT-c 355 (534)
T KOG3653|consen 281 MEYWLVTEFHPKGSLCDYLKA----NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLT-C 355 (534)
T ss_pred cceeEEeeeccCCcHHHHHHh----ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCc-E
Confidence 8999999997 799998864 3489999999999999999999963 4999999999999999987 9
Q ss_pred EEecCCCccccCCCC--cccccccccccccchhhhcCCCCCC-----cchhHhHHHHHHHHHHhCCC------------C
Q psy6391 156 KVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLLGSQRYS-----CPVDVWSIGCIFAEIATRKP------------L 216 (313)
Q Consensus 156 ~l~df~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~-----~~~Di~slG~~l~~ll~g~~------------p 216 (313)
-|+|||+|....... ......+||.+|||||++.+..... .+.||||+|.++|++++.-. |
T Consensus 356 cIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlp 435 (534)
T KOG3653|consen 356 CIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLP 435 (534)
T ss_pred EeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCc
Confidence 999999998774332 2223468999999999997755444 57999999999999998432 2
Q ss_pred CCC-----CChHHHHHHHHHh-cCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC
Q psy6391 217 FQG-----DSEIDQLFRIFRV-LTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN 290 (313)
Q Consensus 217 f~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 290 (313)
|.. ..-+++.....+. ..+..+..|-. ..-...+.+.+..||..||+.|.|
T Consensus 436 fe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~-----------------------h~~~~~l~et~EeCWDhDaeARLT 492 (534)
T KOG3653|consen 436 FEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRK-----------------------HAGMAVLCETIEECWDHDAEARLT 492 (534)
T ss_pred hhHHhcCCCCHHHHHHHHHhhccCCCChhhhhc-----------------------CccHHHHHHHHHHHcCCchhhhhh
Confidence 321 1112222222221 11111111111 123467889999999999999999
Q ss_pred HH
Q psy6391 291 AE 292 (313)
Q Consensus 291 ~~ 292 (313)
+.
T Consensus 493 A~ 494 (534)
T KOG3653|consen 493 AG 494 (534)
T ss_pred hH
Confidence 86
No 398
>KOG1025|consensus
Probab=100.00 E-value=2.6e-32 Score=245.07 Aligned_cols=246 Identities=22% Similarity=0.313 Sum_probs=200.1
Q ss_pred eeeeeeccccceEEEEEEeCcCC----cEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 17 EKVEKIGEGTYGVVYKAKNKVTG----ALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 17 ~~~~~lg~g~~~~v~~~~~~~~~----~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
+..+.||.|+||+||+|.+...+ .+|++|++.... .......+++|+.++.+++|||++++++++.... .-||+
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t-~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT-SPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccC-CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 44578999999999999986554 468888876554 3333588999999999999999999999998775 88899
Q ss_pred eccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 93 EFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 93 e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
+|++ |.|.++++..+ ..+-......|..||+.|+.|||.+++|||||-..||||.+... +|++|||++........
T Consensus 777 q~mP~G~LlDyvr~hr--~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~h-vkitdfgla~ll~~d~~ 853 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVREHR--DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNH-VKITDFGLAKLLAPDEK 853 (1177)
T ss_pred HhcccchHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCe-EEEEecchhhccCcccc
Confidence 9998 59999988743 34778889999999999999999999999999999999998866 99999999988765544
Q ss_pred ccccccc--cccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy6391 172 IYTHEVV--TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 248 (313)
Q Consensus 172 ~~~~~~~--~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
.+....| ..-|+|-|.+... .++.++||||+|+++||+|| |..|+....-.++-.........+.+
T Consensus 854 ey~~~~gK~pikwmale~i~~~-~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsqP---------- 922 (1177)
T KOG1025|consen 854 EYSAPGGKVPIKWMALESIRIR-KYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQP---------- 922 (1177)
T ss_pred cccccccccCcHHHHHHHhhcc-CCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCCC----------
Confidence 4433333 4558888988754 49999999999999999999 88999987665555444433222111
Q ss_pred CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 249 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
+..+.++..++.+||..|+..||+++++.+
T Consensus 923 ------------------piCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 923 ------------------PICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred ------------------CCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 347899999999999999999999998764
No 399
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=100.00 E-value=7.5e-31 Score=213.08 Aligned_cols=213 Identities=39% Similarity=0.640 Sum_probs=182.9
Q ss_pred eccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEeccc-cCHH
Q psy6391 22 IGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMS-MDLK 100 (313)
Q Consensus 22 lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~-~~l~ 100 (313)
||+|++|.||++....+++.+++|++....... ....+.+|+..++.+.|++++++++++......++++|+++ ++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 689999999999998789999999997654322 23678899999999999999999999999999999999999 5888
Q ss_pred HHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEec-CCCeEEEecCCCccccCCCCccccccccc
Q psy6391 101 KYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDA-KSNIVKVADFGLARAFGVPVRIYTHEVVT 179 (313)
Q Consensus 101 ~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~-~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 179 (313)
+++.... ..++...++.++.+++.++.+||+.|++|+||+|.||+++. ++. ++|+||+.+..............+.
T Consensus 80 ~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~-~~l~d~~~~~~~~~~~~~~~~~~~~ 156 (215)
T cd00180 80 DLLKENE--GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGK-VKLADFGLSKLLTSDKSLLKTIVGT 156 (215)
T ss_pred HHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCc-EEEecCCceEEccCCcchhhcccCC
Confidence 8877532 34889999999999999999999999999999999999998 555 9999999998765443222345568
Q ss_pred ccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCch
Q psy6391 180 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN 259 (313)
Q Consensus 180 ~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (313)
..|++||.+......+.++|+|++|++++++
T Consensus 157 ~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------- 187 (215)
T cd00180 157 PAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------- 187 (215)
T ss_pred CCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------------
Confidence 8899999886643578999999999999999
Q ss_pred hhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCC
Q psy6391 260 FCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHK 298 (313)
Q Consensus 260 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~ 298 (313)
..+.+++.+|++.||++||++.++++|+
T Consensus 188 -----------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 -----------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred -----------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 2567899999999999999999999875
No 400
>KOG0200|consensus
Probab=99.98 E-value=4.2e-31 Score=245.24 Aligned_cols=258 Identities=26% Similarity=0.373 Sum_probs=202.5
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeC---c----CCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeec
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNK---V----TGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLH 79 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~---~----~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~ 79 (313)
.+...-++..+.+.||+|.||.|++|... . ....||+|.++..... ...+.+..|+.+++.+ .|+|++.++
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~ll 368 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLL 368 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhhe
Confidence 44555556677789999999999999743 1 1457999998866555 4468899999999999 699999999
Q ss_pred eeEEeCcEEEEEEeccc-cCHHHHHhhCC------CC-------CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCC
Q psy6391 80 DTMIENYRLYLIFEFMS-MDLKKYIDTVP------KG-------QFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQN 145 (313)
Q Consensus 80 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~~------~~-------~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~N 145 (313)
|.+...+..++|+||+. |+|..+++..+ .. ..++...+..++.||+.|++||++.+++|+|+-..|
T Consensus 369 G~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRN 448 (609)
T KOG0200|consen 369 GACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARN 448 (609)
T ss_pred eeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhh
Confidence 99999999999999998 68888887654 01 238899999999999999999999999999999999
Q ss_pred EEEecCCCeEEEecCCCccccCCCCccc-cccc--ccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCC
Q psy6391 146 LLIDAKSNIVKVADFGLARAFGVPVRIY-THEV--VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDS 221 (313)
Q Consensus 146 il~~~~~~~~~l~df~~~~~~~~~~~~~-~~~~--~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~ 221 (313)
||+..+ ..+||+|||++........-. .... -...|||||.+.. ..++.++||||+|++||++++ |..||.+..
T Consensus 449 VLi~~~-~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~-~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~ 526 (609)
T KOG0200|consen 449 VLITKN-KVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD-RVFTSKSDVWSFGILLWEIFTLGGTPYPGIP 526 (609)
T ss_pred EEecCC-CEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc-CcccccchhhHHHHHHHHHhhCCCCCCCCCC
Confidence 999887 459999999998543221111 1111 2345999999987 559999999999999999999 889998754
Q ss_pred -hHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 222 -EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 222 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
..+..+.+..+..... | ..+++++.++++.||+.+|++||++.++.+
T Consensus 527 ~~~~l~~~l~~G~r~~~-----------------P-----------~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 527 PTEELLEFLKEGNRMEQ-----------------P-----------EHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred cHHHHHHHHhcCCCCCC-----------------C-----------CCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 3444333322211111 1 136899999999999999999999998865
No 401
>KOG1345|consensus
Probab=99.97 E-value=1.5e-31 Score=212.63 Aligned_cols=250 Identities=26% Similarity=0.369 Sum_probs=190.6
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeece-eEEeCcEE
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHD-TMIENYRL 88 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~-~~~~~~~~ 88 (313)
...+.|.|.+.||+|.||.+-++.++.++..+++|.+....... +.|.+|...--.+ .|.||+.-++ .|+..+.+
T Consensus 21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~---~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Y 97 (378)
T KOG1345|consen 21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQ---ADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAY 97 (378)
T ss_pred chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhH---HHHHHHhccceeeccchhhhHHHHHHhhcCceE
Confidence 35678999999999999999999999999999999997765553 6778877665555 5899998777 46677899
Q ss_pred EEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEE-ecCCCeEEEecCCCcccc
Q psy6391 89 YLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLI-DAKSNIVKVADFGLARAF 166 (313)
Q Consensus 89 ~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~-~~~~~~~~l~df~~~~~~ 166 (313)
++++||++ |+|.+-.. . ..+-+...+.++.|+++|+.|||++++||+|||.+|||+ +.+-..+||||||.....
T Consensus 98 vF~qE~aP~gdL~snv~---~-~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVE---A-AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKV 173 (378)
T ss_pred EEeeccCccchhhhhcC---c-ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeeccccccc
Confidence 99999998 56554443 2 237888999999999999999999999999999999998 445567999999999887
Q ss_pred CCCCcccccccccccccchhhhcCC----CCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHH----HHHHHHhcCCCCC
Q psy6391 167 GVPVRIYTHEVVTLWYRAPEVLLGS----QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQ----LFRIFRVLTTPTE 238 (313)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~PE~~~~~----~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~----~~~~~~~~~~~~~ 238 (313)
+........ +..|.+||+.... -...+.+|+|++|+++|.+++|..||+.....+. ..+..++..+.
T Consensus 174 g~tV~~~~~---~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~-- 248 (378)
T KOG1345|consen 174 GTTVKYLEY---VNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPA-- 248 (378)
T ss_pred Cceehhhhh---hcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCcc--
Confidence 755432222 4448999987432 2357889999999999999999999985432222 22222221111
Q ss_pred CCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCC---CCHHHHh
Q psy6391 239 DNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATR---INAENAL 295 (313)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R---ps~~e~l 295 (313)
+++.+..+++.+..+.++-|.++|++| .++....
T Consensus 249 -----------------------~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 249 -----------------------LPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred -----------------------CchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 222334688999999999999999999 5544433
No 402
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=5.6e-29 Score=204.56 Aligned_cols=211 Identities=37% Similarity=0.566 Sum_probs=174.8
Q ss_pred ceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEecc
Q psy6391 16 YEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFM 95 (313)
Q Consensus 16 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 95 (313)
|.+.+.||.|++|.||++.+..+++.+++|.+...... .....+.+|+..++.++|++++++++++......++++|++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence 67889999999999999999887899999999765433 13468889999999999999999999999999999999999
Q ss_pred cc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCC-ccc
Q psy6391 96 SM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPV-RIY 173 (313)
Q Consensus 96 ~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~-~~~ 173 (313)
.+ +|.+.+...... +++..++.++.+++.++.+||+.+++|+|++|.||+++.++. ++|+|||.+....... ...
T Consensus 80 ~~~~L~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~-~~l~d~g~~~~~~~~~~~~~ 156 (225)
T smart00221 80 EGGDLFDYLRKKGGK--LSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGL-VKLADFGLARFIHRDLAALL 156 (225)
T ss_pred CCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC-EEEeeCceeeEecCcccccc
Confidence 97 888888763321 789999999999999999999999999999999999998866 9999999988765432 111
Q ss_pred ccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCC-CChH-HHHHHHH
Q psy6391 174 THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQG-DSEI-DQLFRIF 230 (313)
Q Consensus 174 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~-~~~~-~~~~~~~ 230 (313)
....++..|++||.+.+....+.++|+|++|++++++++|+.||.. .+.. ...+.+.
T Consensus 157 ~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~ 215 (225)
T smart00221 157 KTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWS 215 (225)
T ss_pred cceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHh
Confidence 2345677899999884334577799999999999999999999977 3333 4444443
No 403
>KOG1024|consensus
Probab=99.97 E-value=5.5e-30 Score=213.15 Aligned_cols=255 Identities=18% Similarity=0.240 Sum_probs=199.9
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcC-----CcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEE-e
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVT-----GALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMI-E 84 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~-----~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~ 84 (313)
..-.+++....+-+|.||.||.|.++.. .+.+.+|+++.+. .+-....++.|.-.+...+|||++++.++.. +
T Consensus 281 v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A-S~iQv~~~L~es~lly~~sH~nll~V~~V~ie~ 359 (563)
T KOG1024|consen 281 VQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA-SQIQVNLLLQESMLLYGASHPNLLSVLGVSIED 359 (563)
T ss_pred hhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc-cHHHHHHHHHHHHHHhcCcCCCccceeEEEeec
Confidence 3344566677788999999999976532 3456667765443 2233456778888888899999999999876 4
Q ss_pred CcEEEEEEeccc-cCHHHHHh-----hCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEe
Q psy6391 85 NYRLYLIFEFMS-MDLKKYID-----TVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVA 158 (313)
Q Consensus 85 ~~~~~lv~e~~~-~~l~~~~~-----~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~ 158 (313)
....++++.+.+ |+|..+++ .....+.++..++..++.|++.|+.|||+.|++|.||-..|.+++..-. +||+
T Consensus 360 ~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~Lq-Vklt 438 (563)
T KOG1024|consen 360 YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQ-VKLT 438 (563)
T ss_pred cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhhee-EEec
Confidence 567889999988 68888887 3333456888999999999999999999999999999999999988755 9999
Q ss_pred cCCCccccCCC--CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCC
Q psy6391 159 DFGLARAFGVP--VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTT 235 (313)
Q Consensus 159 df~~~~~~~~~--~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~ 235 (313)
|=.++...-+. .+..........|||||.+.+. .++.++|+||||++||+|+| |+.||-..++.++..-+..+-..
T Consensus 439 DsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~-~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRl 517 (563)
T KOG1024|consen 439 DSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNS-HYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRL 517 (563)
T ss_pred cchhccccCcccccccCCCCCCcccccCHHHHhhh-hhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhcccee
Confidence 98888765322 2222223345679999998764 59999999999999999999 89999999998887666543221
Q ss_pred CCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 236 PTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
..+ -++|+++..++.-||..+|++||+.+++..
T Consensus 518 aQP----------------------------~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 518 AQP----------------------------FNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred cCC----------------------------CCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 111 257899999999999999999999999864
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=3.8e-30 Score=247.53 Aligned_cols=202 Identities=15% Similarity=0.232 Sum_probs=145.6
Q ss_pred hcCC-CCceeeceeE-------EeCcEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecc
Q psy6391 69 ELNH-PNIVQLHDTM-------IENYRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRD 140 (313)
Q Consensus 69 ~l~~-~~i~~~~~~~-------~~~~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~d 140 (313)
.++| +||+++++++ ......+.++|+++++|.+++.. ....+++.+++.+++||+.||.|||++||+|+|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrD 105 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDN--PDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHN 105 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhc--ccccccHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence 4445 5777788877 23346788899999999999874 234589999999999999999999999999999
Q ss_pred CCCCCEEEecCCC------------------eEEEecCCCccccCCCC----------------cccccccccccccchh
Q psy6391 141 LKPQNLLIDAKSN------------------IVKVADFGLARAFGVPV----------------RIYTHEVVTLWYRAPE 186 (313)
Q Consensus 141 i~~~Nil~~~~~~------------------~~~l~df~~~~~~~~~~----------------~~~~~~~~~~~~~~PE 186 (313)
|||+|||++..+. .++++|||++....... .......||..|+|||
T Consensus 106 lKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 185 (793)
T PLN00181 106 VRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPE 185 (793)
T ss_pred CCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChh
Confidence 9999999964332 25666666654321000 0001135688899999
Q ss_pred hhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhc
Q psy6391 187 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV 266 (313)
Q Consensus 187 ~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (313)
++.+.. ++.++|||||||+||+|++|..|+..... ..........++. .
T Consensus 186 ~~~~~~-~~~~sDVwSlGviL~ELl~~~~~~~~~~~--~~~~~~~~~~~~~-~--------------------------- 234 (793)
T PLN00181 186 EDNGSS-SNCASDVYRLGVLLFELFCPVSSREEKSR--TMSSLRHRVLPPQ-I--------------------------- 234 (793)
T ss_pred hhccCC-CCchhhhhhHHHHHHHHhhCCCchhhHHH--HHHHHHHhhcChh-h---------------------------
Confidence 987654 79999999999999999999888763221 1111111110000 0
Q ss_pred cCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 267 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 267 ~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
..-.+...+++.+||+++|.+||++.|+++||||++.
T Consensus 235 ~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 235 LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence 0113556789999999999999999999999999874
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.95 E-value=4.9e-28 Score=191.75 Aligned_cols=167 Identities=18% Similarity=0.252 Sum_probs=126.6
Q ss_pred cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccc
Q psy6391 97 MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHE 176 (313)
Q Consensus 97 ~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~ 176 (313)
|+|.+++... +..+++..++.++.||+.||.|||+.+ ||+||+++.++. +++ ||.+...... ..
T Consensus 1 GsL~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~-~~~--fG~~~~~~~~-----~~ 64 (176)
T smart00750 1 VSLADILEVR--GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGL-LKL--DGSVAFKTPE-----QS 64 (176)
T ss_pred CcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccc-eee--ccceEeeccc-----cC
Confidence 5778888752 445999999999999999999999999 999999988876 788 9988765432 22
Q ss_pred cccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHhcCCCCCCCCCCCCCCCCccccCC
Q psy6391 177 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI-DQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFP 255 (313)
Q Consensus 177 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (313)
.|+..|+|||++.+.. ++.++||||+|+++|+|++|+.||...... ....................
T Consensus 65 ~g~~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 131 (176)
T smart00750 65 RVDPYFMAPEVIQGQS-YTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSN------------ 131 (176)
T ss_pred CCcccccChHHhcCCC-CcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCcccccc------------
Confidence 5789999999997644 789999999999999999999999765443 22333322211110000000
Q ss_pred CCchhhhhhhccCCCH--HHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 256 EWSNFCLDKHVKNLDQ--DGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 256 ~~~~~~~~~~~~~~~~--~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
...++. ++.++|.+||+.||.+||++.++++|+|+..
T Consensus 132 ----------~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 132 ----------LESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred ----------HHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 011233 6999999999999999999999999999864
No 406
>KOG1164|consensus
Probab=99.94 E-value=2.5e-25 Score=192.51 Aligned_cols=254 Identities=22% Similarity=0.221 Sum_probs=194.8
Q ss_pred cceeeeeeccccceEEEEEEeCcCC-cEEEEEEecccCCCCCCchhHHHHHHHHhhcC----CCCceeeceeE-EeCcEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTG-ALVAIKKIRMENDDEGIPATAIREISVLKELN----HPNIVQLHDTM-IENYRL 88 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~-~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~----~~~i~~~~~~~-~~~~~~ 88 (313)
+|.+.+.||+|+||.||.+.+..++ ..+|+|+-........ ..+..|..++..+. .+++..+++.. ..+...
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~--~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP--SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC--ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence 8999999999999999999987664 5788887765433321 26778888888886 36899999999 578899
Q ss_pred EEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCC----CeEEEecCCCcc
Q psy6391 89 YLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKS----NIVKVADFGLAR 164 (313)
Q Consensus 89 ~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~----~~~~l~df~~~~ 164 (313)
++||+.++.+|.++..... .+.++...+..++.|++.+|.+||+.|++|+||||+|+++...+ ..+.|.|||++.
T Consensus 97 ~iVM~l~G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 97 FIVMSLLGPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred EEEEeccCccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 9999999999999887655 56799999999999999999999999999999999999997653 459999999998
Q ss_pred ccC---CC------Ccc-cccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcC
Q psy6391 165 AFG---VP------VRI-YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLT 234 (313)
Q Consensus 165 ~~~---~~------~~~-~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~ 234 (313)
... .. .+. .....||..|+|+.+..+.. .+.+.|+||++.++.++..|..||.................
T Consensus 176 ~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e-~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~ 254 (322)
T KOG1164|consen 176 RFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIE-QGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR 254 (322)
T ss_pred cccccCCCCcccccCCCCccCCCCccccccHHHhCCCc-cCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence 321 11 111 22345899999999887654 89999999999999999999999987654333333332111
Q ss_pred CCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 235 TPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
...... .....+.++..+...+-..+...+|....+..
T Consensus 255 ~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~ 292 (322)
T KOG1164|consen 255 KLLTDR------------------------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE 292 (322)
T ss_pred hhcccc------------------------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence 111000 00124577778888777788899998776644
No 407
>KOG1163|consensus
Probab=99.94 E-value=7.8e-26 Score=177.30 Aligned_cols=255 Identities=20% Similarity=0.234 Sum_probs=195.1
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCc
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIENY 86 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 86 (313)
+-....+.|+++++||.|+||.+|.|....+|..||+|+-...... ..+..|..+.+.+ ....|..+..+.....
T Consensus 9 ~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h----pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ 84 (341)
T KOG1163|consen 9 EELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH----PQLLYESKVYRILQGGVGIPHIRHYGTEKD 84 (341)
T ss_pred hhheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC----cchhHHHHHHHHhccCCCCchhhhhccccc
Confidence 3345678999999999999999999999999999999986544332 5677889999998 4678888888888999
Q ss_pred EEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecC--CCeEEEecCCCcc
Q psy6391 87 RLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAK--SNIVKVADFGLAR 164 (313)
Q Consensus 87 ~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~--~~~~~l~df~~~~ 164 (313)
+-++||+.++.+|.++++.-.. .++...+.-++.|++.-++|+|.++++|+||||+|+|+.-+ .+.+.++|||+++
T Consensus 85 ynvlVMdLLGPsLEdLfnfC~R--~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 85 YNVLVMDLLGPSLEDLFNFCSR--RFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred cceeeeeccCccHHHHHHHHhh--hhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchh
Confidence 9999999999999999987433 47888899999999999999999999999999999998433 3569999999998
Q ss_pred ccCCC-------CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCC
Q psy6391 165 AFGVP-------VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPT 237 (313)
Q Consensus 165 ~~~~~-------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~ 237 (313)
...+. .+......||..|.|-....+.. -+.+.|+-|+|.++..+.-|..||++.......++..+......
T Consensus 163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~e-qSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~ 241 (341)
T KOG1163|consen 163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIE-QSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKM 241 (341)
T ss_pred hhccccccccCccccCCccceeeeehhhhhhhhhh-hhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhc
Confidence 76432 23334567899999987665433 68899999999999999999999998766555444433211110
Q ss_pred CCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC
Q psy6391 238 EDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN 290 (313)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 290 (313)
. .-.+..+.++|.++.-.+.-|-..--++-|.
T Consensus 242 s---------------------~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pd 273 (341)
T KOG1163|consen 242 S---------------------TPIEVLCKGFPAEFAMYLNYCRGLGFEEKPD 273 (341)
T ss_pred C---------------------CCHHHHhCCCcHHHHHHHHHHhhcCCCCCCc
Confidence 0 0022233466777776666665554444443
No 408
>KOG0590|consensus
Probab=99.94 E-value=1.9e-27 Score=218.38 Aligned_cols=263 Identities=24% Similarity=0.319 Sum_probs=198.7
Q ss_pred eeeeeeccccceEEEEEEeCcCCcEEEEEEeccc----CCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 17 EKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRME----NDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 17 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
.-...+|.|++|.|+.+......+.+..|.+... .........+..|+-+-..++|++++.....+.+.....-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 4567799999998888877656555566654421 111111122556677777789999998888887776666669
Q ss_pred eccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCC---
Q psy6391 93 EFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVP--- 169 (313)
Q Consensus 93 e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~--- 169 (313)
||++++|..++.. ...++...+..++.|++.|++|||+.|+.|+|+|++|+++...+. +||+|||.+.....+
T Consensus 401 E~~~~Dlf~~~~~---~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~-lki~Dfg~~~vf~~~~e~ 476 (601)
T KOG0590|consen 401 EYCPYDLFSLVMS---NGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGI-LKIIDFGAASVFRYPWEK 476 (601)
T ss_pred hcccHHHHHHHhc---ccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCc-eEEeecCcceeeccCcch
Confidence 9999976666654 345889999999999999999999999999999999999999986 999999998765322
Q ss_pred -CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy6391 170 -VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 248 (313)
Q Consensus 170 -~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
.......+|+..|+|||++..........||||.|+++..|.+|+.||......+........ ..
T Consensus 477 ~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~--------------~~ 542 (601)
T KOG0590|consen 477 NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNY--------------SD 542 (601)
T ss_pred hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcc--------------cc
Confidence 244566788999999999988777788999999999999999999999876554332210000 00
Q ss_pred CccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 249 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
++. ........+..++..-..+|.+||++||++|.|+.+|++.+||++.
T Consensus 543 ~~~------~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i 591 (601)
T KOG0590|consen 543 QRN------IFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI 591 (601)
T ss_pred ccc------cccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence 000 0111223334588999999999999999999999999999999985
No 409
>KOG1165|consensus
Probab=99.93 E-value=6.8e-25 Score=179.47 Aligned_cols=217 Identities=25% Similarity=0.317 Sum_probs=181.8
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCc
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIENY 86 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 86 (313)
.+...--.|+|.++||+|+||.++.|.+--++++||||.=.... ...++..|....+.| ..++|...+.+...+.
T Consensus 22 ~~~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~ 97 (449)
T KOG1165|consen 22 GVLMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGK 97 (449)
T ss_pred CceEecccceeccccccCcceeeecccccccCceEEEEeccccC----CcchHHHHHHHHHHHcCCCCCCceeeeccccc
Confidence 44455668999999999999999999999999999999643321 135678899999988 6899999999888888
Q ss_pred EEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecC----CCeEEEecCCC
Q psy6391 87 RLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAK----SNIVKVADFGL 162 (313)
Q Consensus 87 ~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~----~~~~~l~df~~ 162 (313)
+-.+|+|.++.+|.++++.. +..++...+..++.|++.-++++|++.++++||||+|+|+... .+.+-++|||+
T Consensus 98 ~NiLVidLLGPSLEDLFD~C--gR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGm 175 (449)
T KOG1165|consen 98 YNILVIDLLGPSLEDLFDLC--GRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGM 175 (449)
T ss_pred hhhhhhhhhCcCHHHHHHHh--cCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccc
Confidence 99999999999999999874 3458999999999999999999999999999999999999433 34599999999
Q ss_pred ccccCCC-------CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q psy6391 163 ARAFGVP-------VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFR 231 (313)
Q Consensus 163 ~~~~~~~-------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~ 231 (313)
++..-++ .+......||.+|||-....+.. -+.+.|+-|||-++..++-|..||.+.+.....++.-+
T Consensus 176 AK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrE-QSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeK 250 (449)
T KOG1165|consen 176 AKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGRE-QSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEK 250 (449)
T ss_pred hhhhcCccccccCccccccccccceeeeEeeccccch-hhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHH
Confidence 9887443 33334557899999998887755 78999999999999999999999998766655555544
No 410
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.92 E-value=2.6e-25 Score=184.52 Aligned_cols=237 Identities=19% Similarity=0.264 Sum_probs=154.2
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC-CCCchhHHHHHHHHhhcC----------CCCceeeceeEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-EGIPATAIREISVLKELN----------HPNIVQLHDTMI 83 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~l~~l~----------~~~i~~~~~~~~ 83 (313)
.+...+.||.|+++.||.+++..+++++++|++...... ....+.+++|.-....+. |-+++-.++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 556778999999999999999999999999998765521 112244555554444432 334444444433
Q ss_pred e---------C---c-----EEEEEEeccccCHHHHHhhCC---CC-CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCC
Q psy6391 84 E---------N---Y-----RLYLIFEFMSMDLKKYIDTVP---KG-QFLAADKVKSITYQIFQAILFCHKRRVLHRDLK 142 (313)
Q Consensus 84 ~---------~---~-----~~~lv~e~~~~~l~~~~~~~~---~~-~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~ 142 (313)
. . . ..+++|+-+.++|.+++.... .. ..+.......+..|++..+++||..|++|+||+
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~ 172 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK 172 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence 1 1 1 236789999998887765422 11 122333334566899999999999999999999
Q ss_pred CCCEEEecCCCeEEEecCCCccccCCCCcccccccccccccchhhhcCC-------CCCCcchhHhHHHHHHHHHHhCCC
Q psy6391 143 PQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS-------QRYSCPVDVWSIGCIFAEIATRKP 215 (313)
Q Consensus 143 ~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-------~~~~~~~Di~slG~~l~~ll~g~~ 215 (313)
|+|++++.+|. +.|+||+.....+..... ...+..|.|||..... -.++.+.|.|+||+++|.++++..
T Consensus 173 ~~nfll~~~G~-v~Lg~F~~~~r~g~~~~~---~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~l 248 (288)
T PF14531_consen 173 PENFLLDQDGG-VFLGDFSSLVRAGTRYRC---SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRL 248 (288)
T ss_dssp GGGEEE-TTS--EEE--GGGEEETTEEEEG---GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-
T ss_pred eeeEEEcCCCC-EEEcChHHHeecCceeec---cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccC
Confidence 99999999987 999999988877654332 3345679999976432 247889999999999999999999
Q ss_pred CCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCC
Q psy6391 216 LFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATR 288 (313)
Q Consensus 216 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 288 (313)
||........... .+. .+..+|+.+++||..+|+.||.+|
T Consensus 249 Pf~~~~~~~~~~~-----------~f~----------------------~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 249 PFGLSSPEADPEW-----------DFS----------------------RCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp STCCCGGGSTSGG-----------GGT----------------------TSS---HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCccccccc-----------cch----------------------hcCCcCHHHHHHHHHHccCCcccC
Confidence 9996544211100 010 123588999999999999999988
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.92 E-value=8.5e-23 Score=177.17 Aligned_cols=265 Identities=34% Similarity=0.563 Sum_probs=205.7
Q ss_pred ceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCC-CchhHHHHHHHHhhcCCC-CceeeceeEEeCcEEEEEEe
Q psy6391 16 YEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEG-IPATAIREISVLKELNHP-NIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 16 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~-~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~lv~e 93 (313)
|.+.+.||.|+++.||.+.+. ..+++|.+........ ....+.+|+.++..+.|+ +++++.+.+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 788999999999999999987 6789999887665443 467888999999999888 79999999988888899999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc-
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR- 171 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~- 171 (313)
++.+ ++.+.+........++......++.|++.++.++|+.+++|+|+||+||+++..+..++++|||.+........
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 9986 65544443221125899999999999999999999999999999999999998874599999999875543321
Q ss_pred -----ccccccccccccchhhhcCC--CCCCcchhHhHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHhcCCC-CCCC
Q psy6391 172 -----IYTHEVVTLWYRAPEVLLGS--QRYSCPVDVWSIGCIFAEIATRKPLFQGDSE---IDQLFRIFRVLTTP-TEDN 240 (313)
Q Consensus 172 -----~~~~~~~~~~~~~PE~~~~~--~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~---~~~~~~~~~~~~~~-~~~~ 240 (313)
......++..|++||.+... .......|+|++|+++++++.|..||..... .............+ ....
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASP 238 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccc
Confidence 23566889999999998764 4689999999999999999999999887764 23333333322221 0000
Q ss_pred CCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 241 WPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
... ... ......+.+++..++..+|..|.+..+...+++....
T Consensus 239 ~~~---------~~~-----------~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 281 (384)
T COG0515 239 LSP---------SNP-----------ELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL 281 (384)
T ss_pred cCc---------ccc-----------chhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence 000 000 1123678999999999999999999999998777664
No 412
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.92 E-value=4e-24 Score=184.93 Aligned_cols=172 Identities=20% Similarity=0.198 Sum_probs=130.5
Q ss_pred CCCchhhhhhccceeeeeeccccceEEEEEEeCc-CCcEEEEEEecccCC---CCCCchhHHHHHHHHhhcCCCCceeec
Q psy6391 4 KATDDVKSRLEDYEKVEKIGEGTYGVVYKAKNKV-TGALVAIKKIRMEND---DEGIPATAIREISVLKELNHPNIVQLH 79 (313)
Q Consensus 4 ~~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~~K~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~ 79 (313)
-+..+++...++|.+.+.||+|+||+||+|++.. +++.+|+|++..... .......+.+|+.+++.++|+++++.+
T Consensus 8 ~~~~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l 87 (365)
T PRK09188 8 LPGDQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQL 87 (365)
T ss_pred CcccccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEE
Confidence 3567888999999999999999999999999875 677789998753311 112235688999999999999998533
Q ss_pred eeEEeCcEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccC-CCCCEEEecCCCeEEE
Q psy6391 80 DTMIENYRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDL-KPQNLLIDAKSNIVKV 157 (313)
Q Consensus 80 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di-~~~Nil~~~~~~~~~l 157 (313)
.. .+..++||||+.| +|. ... . .. ...++.+++.+|.+||+.|++|+|| ||+|||++.++. ++|
T Consensus 88 ~~---~~~~~LVmE~~~G~~L~-~~~---~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~-ikL 153 (365)
T PRK09188 88 LA---TGKDGLVRGWTEGVPLH-LAR---P---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGE-AAV 153 (365)
T ss_pred EE---cCCcEEEEEccCCCCHH-HhC---c---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCC-EEE
Confidence 22 2467999999987 453 221 1 11 1467889999999999999999999 999999987766 999
Q ss_pred ecCCCccccCCCCccc--------ccccccccccchhhhc
Q psy6391 158 ADFGLARAFGVPVRIY--------THEVVTLWYRAPEVLL 189 (313)
Q Consensus 158 ~df~~~~~~~~~~~~~--------~~~~~~~~~~~PE~~~ 189 (313)
+|||++.......... ....++..|.+||.+.
T Consensus 154 iDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~ 193 (365)
T PRK09188 154 IDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT 193 (365)
T ss_pred EECccceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence 9999998664332111 1234567789999874
No 413
>KOG0195|consensus
Probab=99.91 E-value=6.9e-25 Score=175.05 Aligned_cols=247 Identities=17% Similarity=0.252 Sum_probs=195.8
Q ss_pred hhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEE
Q psy6391 11 SRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYL 90 (313)
Q Consensus 11 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 90 (313)
+.+++..++.+|.+...|..|+|+++ |..++.|++.....+.+..+.|.+|.-.++-++||||+.+++.|....+..+
T Consensus 187 id~~~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~ 264 (448)
T KOG0195|consen 187 IDVSSLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVI 264 (448)
T ss_pred cchhhhhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceE
Confidence 34566778889999999999999997 5678999999888888888999999999999999999999999999999999
Q ss_pred EEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceeccCCCCCEEEecCCCeEEE--ecCCCccc
Q psy6391 91 IFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRR--VLHRDLKPQNLLIDAKSNIVKV--ADFGLARA 165 (313)
Q Consensus 91 v~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~--i~H~di~~~Nil~~~~~~~~~l--~df~~~~~ 165 (313)
|..|++ |+|+..+... .+-.....++.+++.+|+.++.|||+.. |.--.+++..++++++-. .+| +|--++..
T Consensus 265 isq~mp~gslynvlhe~-t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedlt-arismad~kfsfq 342 (448)
T KOG0195|consen 265 ISQYMPFGSLYNVLHEQ-TSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLT-ARISMADTKFSFQ 342 (448)
T ss_pred eeeeccchHHHHHHhcC-ccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhh-hheecccceeeee
Confidence 999998 6888888763 2334678899999999999999999864 445578999999988754 444 34333322
Q ss_pred cCCCCcccccccccccccchhhhcCCCC--CCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCC
Q psy6391 166 FGVPVRIYTHEVVTLWYRAPEVLLGSQR--YSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~--~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
.. ...-.+.|+|||.+...+. ...++|+||++++++++-|.+.||....+.+.-.++.
T Consensus 343 e~-------gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia------------- 402 (448)
T KOG0195|consen 343 EV-------GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA------------- 402 (448)
T ss_pred cc-------ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh-------------
Confidence 11 1122677999999865432 3568999999999999999999999877766554442
Q ss_pred CCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHh
Q psy6391 244 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENAL 295 (313)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l 295 (313)
++.++..+| ++++..+-.|++-|++.||.+||.++.++
T Consensus 403 ---leglrv~ip-----------pgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 403 ---LEGLRVHIP-----------PGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred ---hccccccCC-----------CCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 122222333 57999999999999999999999987764
No 414
>KOG0603|consensus
Probab=99.89 E-value=4.8e-24 Score=188.15 Aligned_cols=239 Identities=25% Similarity=0.385 Sum_probs=192.7
Q ss_pred eccccceEEEEEEe---CcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcC-CCCceeeceeEEeCcEEEEEEecccc
Q psy6391 22 IGEGTYGVVYKAKN---KVTGALVAIKKIRMENDDEGIPATAIREISVLKELN-HPNIVQLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 22 lg~g~~~~v~~~~~---~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (313)
+|.|++|.|+.++- ...+..|++|++++.............|-.++...+ ||.+++++..++.+...+++.++..|
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 78999999998753 345778999998876644433345556778888885 99999999999999999999999987
Q ss_pred CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCccccccc
Q psy6391 98 DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHEV 177 (313)
Q Consensus 98 ~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~~ 177 (313)
+ +++........+.+...+.....++.+++++|+.+++|+|+|++||+++.+|. +++.|||.++..-.... .+
T Consensus 82 g--~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Gh-i~~tdfglske~v~~~~----~c 154 (612)
T KOG0603|consen 82 G--DLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGH-IKLTDFGLSKEAVKEKI----AC 154 (612)
T ss_pred c--hhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCc-cccCCchhhhHhHhhhh----cc
Confidence 5 45555555556778888888889999999999999999999999999999998 89999999976532221 28
Q ss_pred ccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCC
Q psy6391 178 VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW 257 (313)
Q Consensus 178 ~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (313)
|+..|||||.+. ....++|.||+|+++++|++|..||.. +...++.+.....+
T Consensus 155 gt~eymApEI~~---gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p-------------------- 207 (612)
T KOG0603|consen 155 GTYEYRAPEIIN---GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMP-------------------- 207 (612)
T ss_pred cchhhhhhHhhh---ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCc--------------------
Confidence 899999999886 268899999999999999999999998 33334333111111
Q ss_pred chhhhhhhccCCCHHHHHHHHHHhccCCCCCCCH-----HHHhcCCCCCCC
Q psy6391 258 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINA-----ENALKHKYFADK 303 (313)
Q Consensus 258 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~e~l~h~~~~~~ 303 (313)
..++.++.+++..++..+|.+|... .++++|+||+..
T Consensus 208 ---------~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i 249 (612)
T KOG0603|consen 208 ---------RELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSI 249 (612)
T ss_pred ---------hhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheee
Confidence 2477899999999999999999854 899999999874
No 415
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.89 E-value=1e-22 Score=162.25 Aligned_cols=141 Identities=23% Similarity=0.210 Sum_probs=107.2
Q ss_pred eeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCC-------ch-----------------hHHHHHHHHhhcCCCC
Q psy6391 19 VEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGI-------PA-----------------TAIREISVLKELNHPN 74 (313)
Q Consensus 19 ~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~-------~~-----------------~~~~e~~~l~~l~~~~ 74 (313)
.+.||+|++|.||.|.+. +|+.||+|+++........ .. ....|+..++.+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 568999999999999987 8999999999765322111 01 1234899999998777
Q ss_pred ceeeceeEEeCcEEEEEEeccccC-HHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCceeccCCCCCEEEecCC
Q psy6391 75 IVQLHDTMIENYRLYLIFEFMSMD-LKKYIDTVPKGQFLAADKVKSITYQIFQAILFC-HKRRVLHRDLKPQNLLIDAKS 152 (313)
Q Consensus 75 i~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~L-h~~~i~H~di~~~Nil~~~~~ 152 (313)
+..+..+... ..++||||++|+ +..... ....++...+..++.|++.+|.++ |+.|++|+||||+||+++. +
T Consensus 81 v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~~-~ 154 (190)
T cd05147 81 IPCPEPILLK--SHVLVMEFIGDDGWAAPRL---KDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYHD-G 154 (190)
T ss_pred CCCCcEEEec--CCEEEEEEeCCCCCcchhh---hcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEEC-C
Confidence 7544443322 238999999974 322211 234588999999999999999999 7999999999999999984 4
Q ss_pred CeEEEecCCCccccC
Q psy6391 153 NIVKVADFGLARAFG 167 (313)
Q Consensus 153 ~~~~l~df~~~~~~~ 167 (313)
. ++|+|||++...+
T Consensus 155 ~-v~LiDFG~a~~~~ 168 (190)
T cd05147 155 K-LYIIDVSQSVEHD 168 (190)
T ss_pred c-EEEEEccccccCC
Confidence 4 9999999997554
No 416
>KOG1240|consensus
Probab=99.89 E-value=1.6e-23 Score=194.31 Aligned_cols=248 Identities=24% Similarity=0.369 Sum_probs=182.2
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHH--HhhcCCCCceeeceeEEeCcEEEEEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISV--LKELNHPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~--l~~l~~~~i~~~~~~~~~~~~~~lv~ 92 (313)
++...+.||.+.|=+|.++++. .| .|++|++-++..... .+.+++++.- ....++||++++.-..+.+...|+|-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG-~vVvKVFvk~~p~~s-L~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EG-LVVVKVFVKQDPTIS-LRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cc-eEEEEEEeccCCCCC-chHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHH
Confidence 6788899999999999999887 33 499999977654433 3455544433 44458999999999988888889999
Q ss_pred eccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcc
Q psy6391 93 EFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRI 172 (313)
Q Consensus 93 e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~ 172 (313)
+|+..+|++.+... ..+..-+.+.++-||+.|+..+|..||+|||||.+|||++.-+. +.|+||...+..--+...
T Consensus 101 qyvkhnLyDRlSTR---PFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW-~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 101 QYVKHNLYDRLSTR---PFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNW-LYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred HHHhhhhhhhhccc---hHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeech-hhhhcccccCCccCCCCC
Confidence 99999999887653 34778888889999999999999999999999999999998877 999999877654222111
Q ss_pred ---ccc----ccccccccchhhhcCC----------CCCCcchhHhHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcC
Q psy6391 173 ---YTH----EVVTLWYRAPEVLLGS----------QRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLT 234 (313)
Q Consensus 173 ---~~~----~~~~~~~~~PE~~~~~----------~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~ 234 (313)
... ......|.|||.|-.. ...+++.||||+||+++|+++ |.++|....- -.......
T Consensus 177 Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL----~aYr~~~~ 252 (1431)
T KOG1240|consen 177 PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQL----LAYRSGNA 252 (1431)
T ss_pred cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHH----HhHhccCc
Confidence 111 1224669999998431 126789999999999999998 6788863221 11111100
Q ss_pred CCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcC
Q psy6391 235 TPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 297 (313)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h 297 (313)
..++. -+++ --+..+..+|..|++.||.+|.++++.|+.
T Consensus 253 ------------------~~~e~---~Le~---Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 253 ------------------DDPEQ---LLEK---IEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred ------------------cCHHH---HHHh---CcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 00000 0000 023578899999999999999999999974
No 417
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.88 E-value=3.8e-22 Score=160.92 Aligned_cols=171 Identities=11% Similarity=0.129 Sum_probs=127.8
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCC-CCchh------HHHHHHHHhhcCCCCceeeceeEEeC
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDE-GIPAT------AIREISVLKELNHPNIVQLHDTMIEN 85 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~------~~~e~~~l~~l~~~~i~~~~~~~~~~ 85 (313)
-++|++++.||.|+||.||.+.. ++..+++|++....... ..... +.+|+..+.++.|++|..+..++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 36899999999999999999755 46689999997554322 11112 57899999999999999999987643
Q ss_pred --------cEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEE
Q psy6391 86 --------YRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVK 156 (313)
Q Consensus 86 --------~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~ 156 (313)
+..+++|||++| +|.+... +++. ...+++.++..+|+.|++|+|++|+||+++.++ ++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g--i~ 174 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISED----VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG--LR 174 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh-------ccHH----HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC--EE
Confidence 357899999998 6655421 3332 455899999999999999999999999998876 89
Q ss_pred EecCCCccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHH
Q psy6391 157 VADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 211 (313)
Q Consensus 157 l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll 211 (313)
|+|||........... . ..+.. ..+..++|+|+||+++..+.
T Consensus 175 liDfg~~~~~~e~~a~------d------~~vle-r~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 175 IIDLSGKRCTAQRKAK------D------RIDLE-RHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEECCCcccccchhhH------H------HHHHH-hHhcccccccceeEeehHHH
Confidence 9999988654321110 0 01222 23557999999999877664
No 418
>KOG4158|consensus
Probab=99.87 E-value=2.8e-21 Score=162.09 Aligned_cols=191 Identities=25% Similarity=0.301 Sum_probs=137.5
Q ss_pred CCCCceeeceeEEe---------------------------CcEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHH
Q psy6391 71 NHPNIVQLHDTMIE---------------------------NYRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQ 123 (313)
Q Consensus 71 ~~~~i~~~~~~~~~---------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~ 123 (313)
.||||+++.+.|.+ +...|+||.....+|..++-.. ..+.....-++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~----~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTR----HRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcC----CCchHHHHHHHHH
Confidence 59999999887742 2357999999999998887643 2566777788999
Q ss_pred HHHHHHHHHhCCceeccCCCCCEEEecCCC---eEEEecCCCccccCC---C---CcccccccccccccchhhhcCCCC-
Q psy6391 124 IFQAILFCHKRRVLHRDLKPQNLLIDAKSN---IVKVADFGLARAFGV---P---VRIYTHEVVTLWYRAPEVLLGSQR- 193 (313)
Q Consensus 124 i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~---~~~l~df~~~~~~~~---~---~~~~~~~~~~~~~~~PE~~~~~~~- 193 (313)
+++++.|||++|+.|+|+|++|||+.-+.+ .++++|||.+-..+. . .+..-..-|+...||||.....+.
T Consensus 350 lLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp 429 (598)
T KOG4158|consen 350 LLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGP 429 (598)
T ss_pred HHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCC
Confidence 999999999999999999999999954432 488999998754322 0 111122346788999998754321
Q ss_pred ----CCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCC
Q psy6391 194 ----YSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL 269 (313)
Q Consensus 194 ----~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (313)
.=.++|.|+.|.+.||+++...||....... +... .+....++.-...+
T Consensus 430 ~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~-L~~r--------------------------~Yqe~qLPalp~~v 482 (598)
T KOG4158|consen 430 NAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEML-LDTR--------------------------TYQESQLPALPSRV 482 (598)
T ss_pred ceeeccchhhhhhhhhhHHHHhccCCcccccchhe-echh--------------------------hhhhhhCCCCcccC
Confidence 1247999999999999999999998622111 0000 00001111112368
Q ss_pred CHHHHHHHHHHhccCCCCCCCHH
Q psy6391 270 DQDGLDLLEKTLIYCPATRINAE 292 (313)
Q Consensus 270 ~~~l~~li~~~l~~dp~~Rps~~ 292 (313)
++.+.+++..+|+.||++|+++.
T Consensus 483 pp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 483 PPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred ChHHHHHHHHHhcCCccccCCcc
Confidence 89999999999999999999864
No 419
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.87 E-value=2.3e-21 Score=155.02 Aligned_cols=141 Identities=19% Similarity=0.203 Sum_probs=109.1
Q ss_pred eeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCC------------------------chhHHHHHHHHhhcCCC
Q psy6391 18 KVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGI------------------------PATAIREISVLKELNHP 73 (313)
Q Consensus 18 ~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~------------------------~~~~~~e~~~l~~l~~~ 73 (313)
+.+.||+|++|.||+|.+. +|+.||+|+++........ ......|...+.++.++
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999987 8999999999865321100 01234688899999888
Q ss_pred CceeeceeEEeCcEEEEEEeccccC-HHH-HHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCCEEEec
Q psy6391 74 NIVQLHDTMIENYRLYLIFEFMSMD-LKK-YIDTVPKGQFLAADKVKSITYQIFQAILFCHK-RRVLHRDLKPQNLLIDA 150 (313)
Q Consensus 74 ~i~~~~~~~~~~~~~~lv~e~~~~~-l~~-~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~-~~i~H~di~~~Nil~~~ 150 (313)
++..+..+.... .++||||++|. +.. .+. ...++...+..++.|++.++.++|+ .|++|+||||+||+++
T Consensus 80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~----~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~- 152 (190)
T cd05145 80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLK----DVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH- 152 (190)
T ss_pred CCCCceEEEecC--CEEEEEEecCCCchhhhhh----hccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-
Confidence 876555544333 47999999874 322 222 2347888999999999999999999 9999999999999998
Q ss_pred CCCeEEEecCCCccccC
Q psy6391 151 KSNIVKVADFGLARAFG 167 (313)
Q Consensus 151 ~~~~~~l~df~~~~~~~ 167 (313)
++. ++|+|||++....
T Consensus 153 ~~~-~~liDFG~a~~~~ 168 (190)
T cd05145 153 DGK-PYIIDVSQAVELD 168 (190)
T ss_pred CCC-EEEEEcccceecC
Confidence 555 9999999997654
No 420
>KOG0606|consensus
Probab=99.86 E-value=1.6e-21 Score=180.72 Aligned_cols=223 Identities=29% Similarity=0.407 Sum_probs=168.5
Q ss_pred hhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
.=++|..++.+..|++|.||.++++.+.+.+++| +.+++.- +.+ ++.....|.+|
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~li------lRn---ilt~a~npfvv--------------- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLI------LRN---ILTFAGNPFVV--------------- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhc-ccccchh------hhc---cccccCCccee---------------
Confidence 3468999999999999999999999898899984 3332211 011 22222344433
Q ss_pred EeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 92 FEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 92 ~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
| +.....+..++++.. ++.+++|||+.||+|+|+||+|.+++.-|. +|++|||++....-...
T Consensus 136 -----g---Dc~tllk~~g~lPvd--------mvla~Eylh~ygivhrdlkpdnllIT~mGh-iKlTDfgLsk~GLms~a 198 (1205)
T KOG0606|consen 136 -----G---DCATLLKNIGPLPVD--------MVLAVEYLHSYGIVHRDLKPDNLLITSMGH-IKLTDFGLSKKGLMSLA 198 (1205)
T ss_pred -----c---hhhhhcccCCCCcch--------hhHHhHhhccCCeecCCCCCCcceeeeccc-ccccchhhhhhhhhhcc
Confidence 2 222222233345543 388899999999999999999999999988 89999999865421100
Q ss_pred ---------------ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCC
Q psy6391 172 ---------------IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTP 236 (313)
Q Consensus 172 ---------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~ 236 (313)
.....+||+.|.|||++...+ |+...|.|+||+++|+++.|..||.+..+++.+.+.+.....-
T Consensus 199 tnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqg-ygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~w 277 (1205)
T KOG0606|consen 199 TNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQG-YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEW 277 (1205)
T ss_pred chhhhcchHHHHHHhhhccccCCccccChhhhhhhc-cCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccc
Confidence 112237899999999997655 8999999999999999999999999999999998888744333
Q ss_pred CCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCC---CHHHHhcCCCCCCC
Q psy6391 237 TEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI---NAENALKHKYFADK 303 (313)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp---s~~e~l~h~~~~~~ 303 (313)
++.. ..+++++.++|..+|+.+|..|. .+-++.+|+||+.-
T Consensus 278 pE~d--------------------------ea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~L 321 (1205)
T KOG0606|consen 278 PEED--------------------------EALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLL 321 (1205)
T ss_pred cccC--------------------------cCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeec
Confidence 3221 25889999999999999999997 78889999999984
No 421
>KOG1166|consensus
Probab=99.83 E-value=3.1e-20 Score=174.85 Aligned_cols=196 Identities=22% Similarity=0.304 Sum_probs=156.8
Q ss_pred hhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcC---CCCceeeceeEEeCc
Q psy6391 10 KSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELN---HPNIVQLHDTMIENY 86 (313)
Q Consensus 10 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~ 86 (313)
.-.-..|.|.+.+|+|++|.||.|.... |+.+|+|+=+.....+ +.--.+++.+|+ -+.|..+...+.-.+
T Consensus 694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE-----fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 694 EVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE-----FYICLQVMERLKPQMLPSIMHISSAHVFQN 767 (974)
T ss_pred eecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee-----eeehHHHHHhhchhhhcchHHHHHHHccCC
Confidence 3345678999999999999999999885 9999999876554332 222334444444 566777888888888
Q ss_pred EEEEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEec------CCCeEEEec
Q psy6391 87 RLYLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDA------KSNIVKVAD 159 (313)
Q Consensus 87 ~~~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~------~~~~~~l~d 159 (313)
..++|++|.+ |+|.++++ ..+.+++..+.-+..|++..+..||..+|+||||||+|+|+.. +...++|+|
T Consensus 768 ~S~lv~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lID 844 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLID 844 (974)
T ss_pred cceeeeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEe
Confidence 9999999998 69989888 4556899999999999999999999999999999999999932 223499999
Q ss_pred CCCccccC--CCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCC
Q psy6391 160 FGLARAFG--VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKP 215 (313)
Q Consensus 160 f~~~~~~~--~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~ 215 (313)
||.+.... .........++|..+-.+|...+. +++...|-|.|+.+++.|+.|+.
T Consensus 845 fG~siDm~lfp~~~~F~~~~~td~f~C~EM~~gr-pWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 845 FGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGR-PWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred cccceeeeEcCCCcEEeeeeccccchhHHHhcCC-CCchhhhhHHHHHHHHHHHHHHH
Confidence 99997652 122344556788899999987764 59999999999999999999873
No 422
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.83 E-value=1.1e-19 Score=143.74 Aligned_cols=187 Identities=17% Similarity=0.041 Sum_probs=135.5
Q ss_pred eeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCC--CchhHHHHHHHHhhc-CCCCceeeceeEEeCcEEEEEEe
Q psy6391 17 EKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEG--IPATAIREISVLKEL-NHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 17 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
.+...|++|+||+|+.+.. .+.+++.+.+........ ....+.+|+++++++ ++++++.++++ +..+++|+
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 4678899999999997765 477888787765553221 112477899999999 45889888886 45689999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccC-CCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDL-KPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di-~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
|+.| +|..... . ....++.|++.++.++|+.|++|+|| ||+|||++.++. ++|+|||++........
T Consensus 79 yI~G~~L~~~~~---------~-~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~-i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 79 YLAGAAMYQRPP---------R-GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGS-PAVIDFQLAVRGNPRAR 147 (218)
T ss_pred eecCccHHhhhh---------h-hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCC-EEEEECCCceecCCcch
Confidence 9998 4432211 1 12347789999999999999999999 799999998776 99999999986543321
Q ss_pred c----c---------ccccccccccchhhhcCC-CCCCcchhHhHHHHHHHHHHhCCCCCCCC
Q psy6391 172 I----Y---------THEVVTLWYRAPEVLLGS-QRYSCPVDVWSIGCIFAEIATRKPLFQGD 220 (313)
Q Consensus 172 ~----~---------~~~~~~~~~~~PE~~~~~-~~~~~~~Di~slG~~l~~ll~g~~pf~~~ 220 (313)
. . .....++.+++|+...-- ...-.+.+.++.|..+|.++|+..+.-+.
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 1 0 001125667777654322 22337789999999999999999876544
No 423
>KOG1023|consensus
Probab=99.81 E-value=3e-19 Score=157.65 Aligned_cols=204 Identities=22% Similarity=0.289 Sum_probs=156.0
Q ss_pred hhcCCCCceeeceeEEeCcEEEEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-eeccCCCCC
Q psy6391 68 KELNHPNIVQLHDTMIENYRLYLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRV-LHRDLKPQN 145 (313)
Q Consensus 68 ~~l~~~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i-~H~di~~~N 145 (313)
+.+.|.|+.+++|.+.++...++|.+|++ |+|.+.+.. ....+.+.-...+.++|+.++.|||...+ .||.+++.|
T Consensus 2 ~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 2 RQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred cccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 56789999999999999999999999998 699998876 34457888888999999999999998765 899999999
Q ss_pred EEEecCCCeEEEecCCCccccCCC--CcccccccccccccchhhhcCCC------CCCcchhHhHHHHHHHHHHhCCCCC
Q psy6391 146 LLIDAKSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEVLLGSQ------RYSCPVDVWSIGCIFAEIATRKPLF 217 (313)
Q Consensus 146 il~~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~~~~PE~~~~~~------~~~~~~Di~slG~~l~~ll~g~~pf 217 (313)
.+++.... +|++|||+....... ........-..-|.|||.+.... ..+.+.|+||+|++++++++.+.||
T Consensus 80 Clvd~~w~-lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~ 158 (484)
T KOG1023|consen 80 CLVDSRWV-LKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF 158 (484)
T ss_pred ceeeeeEE-EEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence 99999876 999999998776421 11111122356799999986531 1578899999999999999999999
Q ss_pred CCC----ChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHH
Q psy6391 218 QGD----SEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAEN 293 (313)
Q Consensus 218 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e 293 (313)
... .+.+...++.+....+..+..... ..+++++..+++.||..+|.+||++++
T Consensus 159 ~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~----------------------~e~~~~l~~l~~~cw~e~P~~rPs~~~ 216 (484)
T KOG1023|consen 159 DLRNLVEDPDEIILRVKKGGSNPFRPSIELL----------------------NELPPELLLLVARCWEEIPEKRPSIEQ 216 (484)
T ss_pred ccccccCChHHHHHHHHhcCCCCcCcchhhh----------------------hhcchHHHHHHHHhcccChhhCccHHH
Confidence 863 222344443331222222222110 135678999999999999999999998
Q ss_pred Hhc
Q psy6391 294 ALK 296 (313)
Q Consensus 294 ~l~ 296 (313)
+-.
T Consensus 217 i~~ 219 (484)
T KOG1023|consen 217 IRS 219 (484)
T ss_pred HHh
Confidence 754
No 424
>smart00090 RIO RIO-like kinase.
Probab=99.80 E-value=4.7e-19 Score=145.98 Aligned_cols=148 Identities=20% Similarity=0.136 Sum_probs=109.7
Q ss_pred hhccceeeeeeccccceEEEEEE-eCcCCcEEEEEEecccCCCCC----------------------CchhHHHHHHHHh
Q psy6391 12 RLEDYEKVEKIGEGTYGVVYKAK-NKVTGALVAIKKIRMENDDEG----------------------IPATAIREISVLK 68 (313)
Q Consensus 12 ~~~~y~~~~~lg~g~~~~v~~~~-~~~~~~~~~~K~~~~~~~~~~----------------------~~~~~~~e~~~l~ 68 (313)
.-.-|.+.+.||+|++|.||+|. +..+|+.||+|+++....... ....+..|+..++
T Consensus 26 ~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~ 105 (237)
T smart00090 26 RGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQ 105 (237)
T ss_pred cCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 33458899999999999999998 666899999999875432100 0022457999999
Q ss_pred hcCCC--CceeeceeEEeCcEEEEEEeccccC-HHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ceeccCCCC
Q psy6391 69 ELNHP--NIVQLHDTMIENYRLYLIFEFMSMD-LKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRR-VLHRDLKPQ 144 (313)
Q Consensus 69 ~l~~~--~i~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~-i~H~di~~~ 144 (313)
.+.+. .+.++++. . ..++||||++|. +..... ....+....+..++.||+.++.+||+.| ++|+||+|+
T Consensus 106 ~L~~~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~ 178 (237)
T smart00090 106 RLYEAGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRL---KDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEY 178 (237)
T ss_pred HHHhcCCCCCeeeEe---c-CceEEEEEecCCccccccc---ccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChh
Confidence 99653 33344432 2 358999999984 333221 2234666778899999999999999999 999999999
Q ss_pred CEEEecCCCeEEEecCCCccccCC
Q psy6391 145 NLLIDAKSNIVKVADFGLARAFGV 168 (313)
Q Consensus 145 Nil~~~~~~~~~l~df~~~~~~~~ 168 (313)
||+++ ++. ++|+|||.+...+.
T Consensus 179 NIli~-~~~-i~LiDFg~a~~~~~ 200 (237)
T smart00090 179 NILVH-DGK-VVIIDVSQSVELDH 200 (237)
T ss_pred hEEEE-CCC-EEEEEChhhhccCC
Confidence 99998 545 99999999875543
No 425
>PRK10345 hypothetical protein; Provisional
Probab=99.80 E-value=1.2e-18 Score=140.19 Aligned_cols=137 Identities=20% Similarity=0.242 Sum_probs=104.8
Q ss_pred ceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-----CCCCceeeceeEEeCc---E
Q psy6391 16 YEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-----NHPNIVQLHDTMIENY---R 87 (313)
Q Consensus 16 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~---~ 87 (313)
+.-.+.||+|++|.||. +..++.. ++|+....... ..+.+.+|+.+++.+ .||||++++++++++. .
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~--~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~ 78 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDG--GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGY 78 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccc--hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeE
Confidence 44567899999999995 6656655 68988764322 246789999999999 5799999999999773 4
Q ss_pred -EEEEEeccc---cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHH-HHHHhCCceeccCCCCCEEEecCC---CeEEEec
Q psy6391 88 -LYLIFEFMS---MDLKKYIDTVPKGQFLAADKVKSITYQIFQAI-LFCHKRRVLHRDLKPQNLLIDAKS---NIVKVAD 159 (313)
Q Consensus 88 -~~lv~e~~~---~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l-~~Lh~~~i~H~di~~~Nil~~~~~---~~~~l~d 159 (313)
+.+|+||.+ ++|.+++... .+++. ..++.+++.++ +|||+++|+|+||||+|||++..+ ..++|+|
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiD 152 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCD 152 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEE
Confidence 347899954 5888888642 25555 35577777777 899999999999999999997532 2499999
Q ss_pred CCCc
Q psy6391 160 FGLA 163 (313)
Q Consensus 160 f~~~ 163 (313)
++.+
T Consensus 153 g~G~ 156 (210)
T PRK10345 153 NIGE 156 (210)
T ss_pred CCCC
Confidence 5544
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.77 E-value=8.6e-18 Score=136.96 Aligned_cols=135 Identities=17% Similarity=0.245 Sum_probs=110.1
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCCCCC------CchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEG------IPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
+.||+|++|.||+|.+ .+..+++|+......... ....+.+|+.++..+.++++..+..++.+.+..+++||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME 79 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence 5789999999999987 477899998654332211 11346689999999999999888888888888999999
Q ss_pred cccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 94 FMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 94 ~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
|++| +|.+.+... .. ....++.+++.+|.+||+.|++|+|++|.||+++ ++. ++++|||.+..
T Consensus 80 ~~~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~-~~liDf~~a~~ 143 (211)
T PRK14879 80 YIEGEPLKDLINSN------GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGK-IYLIDFGLAEF 143 (211)
T ss_pred EeCCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCC-EEEEECCcccC
Confidence 9987 777776542 12 7888999999999999999999999999999998 444 89999998865
No 427
>KOG1033|consensus
Probab=99.75 E-value=6.5e-19 Score=153.05 Aligned_cols=181 Identities=27% Similarity=0.383 Sum_probs=134.1
Q ss_pred cEEEEEEeccc-cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcc
Q psy6391 86 YRLYLIFEFMS-MDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLAR 164 (313)
Q Consensus 86 ~~~~lv~e~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~ 164 (313)
.+.+|.|.++. .+|.+++.........+...+..++.|++.++.| +|.+|+|++|.||++..++. ++|+|||+..
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q-~kIgDFgl~t 404 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQ-LKIGDFGLVT 404 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchh-hhhhhhhhee
Confidence 35788999997 5999999876666667888999999999999999 99999999999999987765 9999999987
Q ss_pred ccCCCC------cccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCC
Q psy6391 165 AFGVPV------RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTE 238 (313)
Q Consensus 165 ~~~~~~------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~ 238 (313)
...... ...+..+||.+||+||.+.+.. ++.++||||||+++++++. +|+...........++.
T Consensus 405 s~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~-y~~kvdIyaLGlil~EL~~---~f~T~~er~~t~~d~r~------ 474 (516)
T KOG1033|consen 405 SQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQ-YSEKVDIYALGLILAELLI---QFSTQFERIATLTDIRD------ 474 (516)
T ss_pred ecccCCcccchhhhhhhcccccccCCHHHHhhhh-hhhhcchhhHHHHHHHHHH---HhccHHHHHHhhhhhhc------
Confidence 664322 2334568899999999998755 9999999999999999997 22211111111111110
Q ss_pred CCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCC
Q psy6391 239 DNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA 301 (313)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~ 301 (313)
..+.+..+.+ -+.-.+|+..|+.+.|.+||++.+.--|+|.+
T Consensus 475 ----------------g~ip~~~~~d-----~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~~ 516 (516)
T KOG1033|consen 475 ----------------GIIPPEFLQD-----YPEEYTLLQQLLSPSPEERPSAIEVALHEFLQ 516 (516)
T ss_pred ----------------CCCChHHhhc-----CcHHHHHHHHhcCCCcccCchHHHHhhhhhcC
Confidence 0111111111 14556899999999999999888877777753
No 428
>KOG0590|consensus
Probab=99.75 E-value=1.3e-19 Score=166.91 Aligned_cols=264 Identities=23% Similarity=0.318 Sum_probs=201.5
Q ss_pred hccceeeeeeccccceEEEEEEeCcC-CcEEEEEEecccCCCCCCchhHHHHHHHHhhcC-CCCceeeceeEEeCcEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVT-GALVAIKKIRMENDDEGIPATAIREISVLKELN-HPNIVQLHDTMIENYRLYL 90 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~-~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l 90 (313)
...|.+.+.||+|+++.|-......+ ...++.|.+............+..|..+-+.+. |+|++..++...+.+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 67899999999999999988876433 344666655544433444456666888888886 9999999999999999999
Q ss_pred EEecccc-CHHHHHhhCCCCC-CCCHHHHHHHHHHHHHHHHHHH-hCCceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 91 IFEFMSM-DLKKYIDTVPKGQ-FLAADKVKSITYQIFQAILFCH-KRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 91 v~e~~~~-~l~~~~~~~~~~~-~l~~~~~~~~~~~i~~~l~~Lh-~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
+.++..| ++...+. ..+. ..+...+...+.|+..++.|+| ..+++|+|++|+|.+++..+..+++.|||++....
T Consensus 99 ~~~~s~g~~~f~~i~--~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~ 176 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKIS--HPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYR 176 (601)
T ss_pred ccCcccccccccccc--cCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhcccc
Confidence 9999876 3333331 2332 4677778889999999999999 99999999999999999988239999999998764
Q ss_pred C---CCcccccccc-cccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCC
Q psy6391 168 V---PVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPG 243 (313)
Q Consensus 168 ~---~~~~~~~~~~-~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
. ........+| +..|++||...+........|+||+|+++..+++|..|+...........-.....
T Consensus 177 ~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~--------- 247 (601)
T KOG0590|consen 177 NKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNK--------- 247 (601)
T ss_pred ccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccc---------
Confidence 4 2334444577 99999999987756678999999999999999999999986654331111110000
Q ss_pred CCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 244 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
...-...+..++....+++.+++..+|.+|.+.+++..++|+..
T Consensus 248 ---------------~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 248 ---------------GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred ---------------cccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 00001112468899999999999999999999999999999998
No 429
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.73 E-value=3.5e-17 Score=131.90 Aligned_cols=139 Identities=22% Similarity=0.261 Sum_probs=103.8
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCC--------------------CchhHHHHHHHHhhcCCCC
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEG--------------------IPATAIREISVLKELNHPN 74 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~~~~ 74 (313)
.|.+.+.||.|++|.||++... +|+.+++|++........ .......|...+..+.+++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 3788899999999999999875 789999998765431100 0113566888888887664
Q ss_pred --ceeeceeEEeCcEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecC
Q psy6391 75 --IVQLHDTMIENYRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAK 151 (313)
Q Consensus 75 --i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~ 151 (313)
+...++ ....+++|||++| ++..... ......++.+|+.++.++|+.|++|+||+|+||+++.+
T Consensus 95 i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~---------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~ 161 (198)
T cd05144 95 FPVPKPID----WNRHAVVMEYIDGVELYRVRV---------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDD 161 (198)
T ss_pred CCCCceee----cCCceEEEEEeCCcchhhccc---------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCC
Confidence 333332 3455899999998 4433211 13456788999999999999999999999999999987
Q ss_pred CCeEEEecCCCccccCC
Q psy6391 152 SNIVKVADFGLARAFGV 168 (313)
Q Consensus 152 ~~~~~l~df~~~~~~~~ 168 (313)
+. ++|+|||.+.....
T Consensus 162 ~~-~~liDfg~~~~~~~ 177 (198)
T cd05144 162 EK-IYIIDWPQMVSTDH 177 (198)
T ss_pred Cc-EEEEECCccccCCC
Confidence 66 99999999965543
No 430
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.73 E-value=5.4e-17 Score=131.01 Aligned_cols=131 Identities=18% Similarity=0.245 Sum_probs=102.3
Q ss_pred eeccccceEEEEEEeCcCCcEEEEEEecccCCCCC------CchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEec
Q psy6391 21 KIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEG------IPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEF 94 (313)
Q Consensus 21 ~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 94 (313)
.||+|++|.||++.. ++..+++|+......... ....+.+|+.+++.+.++++..+..++...+..+++|||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 379999999999985 467899998654322111 114466899999999888777666666677778999999
Q ss_pred ccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 95 MSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 95 ~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
++| +|.+.+... . . .++.+++.+|.+||+.|++|+|++|.||+++ ++. ++++|||.+..
T Consensus 79 ~~g~~l~~~~~~~---~---~----~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~-~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEG---N---D----ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDK-LYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhc---H---H----HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCc-EEEEECCCCcC
Confidence 987 666655431 1 0 7888999999999999999999999999998 544 99999998865
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.70 E-value=1.6e-16 Score=146.62 Aligned_cols=137 Identities=17% Similarity=0.188 Sum_probs=106.2
Q ss_pred cceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCC------CCchhHHHHHHHHhhcCCCCceeeceeEEeCcEE
Q psy6391 15 DYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDE------GIPATAIREISVLKELNHPNIVQLHDTMIENYRL 88 (313)
Q Consensus 15 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 88 (313)
.|...+.||+|++|.||++.+.. ..+++|+........ .....+.+|+.+++.++|+++..+..+..+....
T Consensus 334 ~~~~~~~iG~G~~g~Vy~~~~~~--~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 334 RKIPDHLIGKGAEADIKKGEYLG--RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred ccCccceeccCCcEEEEEEeecC--ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 34567899999999999998763 344555432211111 1124577899999999999999888888877788
Q ss_pred EEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 89 YLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 89 ~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
++||||++| +|.+.+. ....++.+++.+|.+||+.|++|+|+||+||+++ ++. ++|+|||++...
T Consensus 412 ~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~-~~~-~~liDFGla~~~ 477 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR-DDR-LYLIDFGLGKYS 477 (535)
T ss_pred EEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE-CCc-EEEEeCcccccC
Confidence 999999987 6666554 3467889999999999999999999999999994 444 999999999654
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.68 E-value=5.2e-16 Score=123.99 Aligned_cols=137 Identities=25% Similarity=0.287 Sum_probs=95.5
Q ss_pred eeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhH----------------------HHHHHHHhhcCCC--C
Q psy6391 19 VEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATA----------------------IREISVLKELNHP--N 74 (313)
Q Consensus 19 ~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~----------------------~~e~~~l~~l~~~--~ 74 (313)
.+.||+|++|.||.+.+. +++.|++|++............. ..|...+..+.+. .
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 567999999999999987 78999999987543221111111 2455555555332 2
Q ss_pred ceeeceeEEeCcEEEEEEeccccC-HH-HHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCCEEEecC
Q psy6391 75 IVQLHDTMIENYRLYLIFEFMSMD-LK-KYIDTVPKGQFLAADKVKSITYQIFQAILFCHK-RRVLHRDLKPQNLLIDAK 151 (313)
Q Consensus 75 i~~~~~~~~~~~~~~lv~e~~~~~-l~-~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~-~~i~H~di~~~Nil~~~~ 151 (313)
+.++++. ...+++|||++++ +. ..+.... . ...++.++.+++.++.++|. .|++|+||+|+||+++ +
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~----~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~ 150 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR----L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-D 150 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhh----h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-C
Confidence 3333332 2458999999872 11 1121111 1 16678899999999999999 9999999999999999 5
Q ss_pred CCeEEEecCCCccccC
Q psy6391 152 SNIVKVADFGLARAFG 167 (313)
Q Consensus 152 ~~~~~l~df~~~~~~~ 167 (313)
+. ++++|||.+....
T Consensus 151 ~~-~~liDfg~a~~~~ 165 (187)
T cd05119 151 GK-VYIIDVPQAVEID 165 (187)
T ss_pred Cc-EEEEECccccccc
Confidence 55 9999999996543
No 433
>KOG0601|consensus
Probab=99.67 E-value=1.5e-16 Score=140.74 Aligned_cols=255 Identities=20% Similarity=0.210 Sum_probs=196.5
Q ss_pred ccceeeeeecc--ccceEEEEEEe--CcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCcEE
Q psy6391 14 EDYEKVEKIGE--GTYGVVYKAKN--KVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIENYRL 88 (313)
Q Consensus 14 ~~y~~~~~lg~--g~~~~v~~~~~--~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~ 88 (313)
..+.+.+.+|. |.+|.||.+.. ..++..+++|.-+...........=.+|+...+.+ .|++.++.+..++..+..
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence 34567788999 99999999998 78889999998554443333233444666666666 599999999999999999
Q ss_pred EEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHH----HHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcc
Q psy6391 89 YLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQ----AILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLAR 164 (313)
Q Consensus 89 ~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~----~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~ 164 (313)
++-+|.++.+|...... ....++...++..+.+... |+.++|+.+++|.|++|.||+...++...+++||+...
T Consensus 194 fiqtE~~~~sl~~~~~~--~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~ 271 (524)
T KOG0601|consen 194 FIQTELCGESLQSYCHT--PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVS 271 (524)
T ss_pred eeeeccccchhHHhhhc--ccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeE
Confidence 99999999887777665 3445889999999999999 99999999999999999999999885559999999998
Q ss_pred ccCCCCccccc-----ccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHHhcCCCC
Q psy6391 165 AFGVPVRIYTH-----EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGD--SEIDQLFRIFRVLTTPT 237 (313)
Q Consensus 165 ~~~~~~~~~~~-----~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~--~~~~~~~~~~~~~~~~~ 237 (313)
..+.+.-.... ..|...|++||...+ -++..+|+|+||.++.+...+....... .......... .
T Consensus 272 ~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~--l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~-----i- 343 (524)
T KOG0601|consen 272 KISDGNFSSVFKVSKRPEGDCIYAAKELLNG--LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY-----I- 343 (524)
T ss_pred EccCCccccceeeeecCCCCceEeChhhhcc--ccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc-----C-
Confidence 88655322222 266788999998754 4799999999999988888877655433 2222211111 0
Q ss_pred CCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 238 EDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
....+.+.+.++...+..|+..+|..|++++.+.+|.++.+
T Consensus 344 ------------------------p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s 384 (524)
T KOG0601|consen 344 ------------------------PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS 384 (524)
T ss_pred ------------------------chhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence 01112356778888999999999999999999999999985
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.64 E-value=4.2e-15 Score=122.76 Aligned_cols=136 Identities=19% Similarity=0.215 Sum_probs=101.5
Q ss_pred eeec-cccceEEEEEEeCcCCcEEEEEEecccCC-----------CCCCchhHHHHHHHHhhcCCCCc--eeeceeEEeC
Q psy6391 20 EKIG-EGTYGVVYKAKNKVTGALVAIKKIRMEND-----------DEGIPATAIREISVLKELNHPNI--VQLHDTMIEN 85 (313)
Q Consensus 20 ~~lg-~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-----------~~~~~~~~~~e~~~l~~l~~~~i--~~~~~~~~~~ 85 (313)
..|| .|+.|+||.+... +..+++|.+..... .......+.+|+.++..+.++++ +.++++....
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4576 7899999999775 67899998853210 01123567789999999988775 6677664432
Q ss_pred -c---EEEEEEecccc--CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEec
Q psy6391 86 -Y---RLYLIFEFMSM--DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVAD 159 (313)
Q Consensus 86 -~---~~~lv~e~~~~--~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~d 159 (313)
. ..++|+|+++| +|.+.+.. ..+++.. +.+|+.++.+||+.|++|+||+|.|||++.++. ++|+|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~-v~LID 185 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE----APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGK-FWLID 185 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc----CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCC-EEEEE
Confidence 2 23599999986 67666643 2355543 568999999999999999999999999988765 99999
Q ss_pred CCCcccc
Q psy6391 160 FGLARAF 166 (313)
Q Consensus 160 f~~~~~~ 166 (313)
||.+...
T Consensus 186 fg~~~~~ 192 (239)
T PRK01723 186 FDRGELR 192 (239)
T ss_pred CCCcccC
Confidence 9988653
No 435
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.62 E-value=5.2e-15 Score=113.68 Aligned_cols=132 Identities=19% Similarity=0.249 Sum_probs=107.9
Q ss_pred eeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCC--CCceeeceeEEeCcEEEEEEecc
Q psy6391 18 KVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNH--PNIVQLHDTMIENYRLYLIFEFM 95 (313)
Q Consensus 18 ~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~lv~e~~ 95 (313)
+.+.||.|.++.||++... +..+++|....... ...+.+|+..++.+++ ..+.+++.+....+..++++||+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~ 75 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI 75 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence 4678999999999999986 36899998865432 3578899999999966 58889998888888999999999
Q ss_pred ccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 96 SMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKR---RVLHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 96 ~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~---~i~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
+|..... ++......++.+++.++..||.. +++|+|++|.||+++..+. ++++||+.+..
T Consensus 76 ~g~~~~~---------~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~-~~l~Df~~~~~ 138 (155)
T cd05120 76 EGETLDE---------VSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKI-LGIIDWEYAGY 138 (155)
T ss_pred CCeeccc---------CCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcE-EEEEecccccC
Confidence 8741111 14556677889999999999985 7999999999999998654 99999998854
No 436
>KOG1243|consensus
Probab=99.60 E-value=2.1e-14 Score=128.72 Aligned_cols=169 Identities=22% Similarity=0.335 Sum_probs=131.3
Q ss_pred EEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEeccccCHHHHHhhCCCCCC
Q psy6391 32 KAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFEFMSMDLKKYIDTVPKGQF 111 (313)
Q Consensus 32 ~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~ 111 (313)
.|..+.++.++.+.+++.... .......+.+..++.++||+|+++++.++.++..|+|+|.+.. |...+..
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~P-l~~~lk~------ 100 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRP-LETVLKE------ 100 (690)
T ss_pred ccceeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecccc-HHHHHHH------
Confidence 466677889999998876554 4456788899999999999999999999999999999998865 2244444
Q ss_pred CCHHHHHHHHHHHHHHHHHHH-hCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccccccccccchhhhcC
Q psy6391 112 LAADKVKSITYQIFQAILFCH-KRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG 190 (313)
Q Consensus 112 l~~~~~~~~~~~i~~~l~~Lh-~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~ 190 (313)
+....+..-++||+.||.+|| ..+++|++|+-+.|+++..|. .+|++|.++...............--.|..|+.+..
T Consensus 101 l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~Ge-WkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 101 LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGE-WKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDP 179 (690)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCc-EEEeeeEEEeccccCCcccccchhhhcccChhhcCc
Confidence 446778888999999999998 578999999999999999987 999999988665332211111222333666665432
Q ss_pred CCCCCcchhHhHHHHHHHHHHhC
Q psy6391 191 SQRYSCPVDVWSIGCIFAEIATR 213 (313)
Q Consensus 191 ~~~~~~~~Di~slG~~l~~ll~g 213 (313)
-.-..|.|.||+++++++.|
T Consensus 180 ---s~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 180 ---SEWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred ---cccchhhhhHHHHHHHHhCc
Confidence 22567999999999999998
No 437
>KOG1266|consensus
Probab=99.54 E-value=1.1e-15 Score=125.70 Aligned_cols=201 Identities=21% Similarity=0.238 Sum_probs=136.7
Q ss_pred HhhcCCCCceeeceeEEeC-----cEEEEEEeccc-cCHHHHHhhCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCC--ce
Q psy6391 67 LKELNHPNIVQLHDTMIEN-----YRLYLIFEFMS-MDLKKYIDTVPK-GQFLAADKVKSITYQIFQAILFCHKRR--VL 137 (313)
Q Consensus 67 l~~l~~~~i~~~~~~~~~~-----~~~~lv~e~~~-~~l~~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~Lh~~~--i~ 137 (313)
+-++-|.|+++++.|+.+. ....++.||+. |++...+++... ...+......+|+.||+.||.|||+.. ++
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppii 200 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPII 200 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccc
Confidence 3334699999999998754 35789999997 588888876443 445778888899999999999999874 99
Q ss_pred eccCCCCCEEEecCCCeEEEecCCCccccCC----CCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhC
Q psy6391 138 HRDLKPQNLLIDAKSNIVKVADFGLARAFGV----PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 213 (313)
Q Consensus 138 H~di~~~Nil~~~~~~~~~l~df~~~~~~~~----~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g 213 (313)
|+++....|++..+|. +|++.-.....-.. .........+.+.|.+||.-.. ...+-++|||++|.+..+|..+
T Consensus 201 hgnlTc~tifiq~ngL-Ikig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~-tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 201 HGNLTCDTIFIQHNGL-IKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTT-TNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cCCcchhheeecCCce-EEecccCccccchhhhhhhHhhhhccccCCccccCCcCcc-cccccchhhhhhhHHHHHHHHh
Confidence 9999999999997765 77764322211100 0001112244677999986433 3467899999999999999988
Q ss_pred CCCCCCC-ChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCC-HHHHHHHHHHhccCCCCCCCH
Q psy6391 214 KPLFQGD-SEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD-QDGLDLLEKTLIYCPATRINA 291 (313)
Q Consensus 214 ~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~ 291 (313)
..--... .....-..+.+.. -++. +--.+++.+|++..|+.||++
T Consensus 279 Eiq~tnseS~~~~ee~ia~~i---------------------------------~~len~lqr~~i~kcl~~eP~~rp~a 325 (458)
T KOG1266|consen 279 EIQSTNSESKVEVEENIANVI---------------------------------IGLENGLQRGSITKCLEGEPNGRPDA 325 (458)
T ss_pred eeccCCCcceeehhhhhhhhe---------------------------------eeccCccccCcCcccccCCCCCCcch
Confidence 7532221 1111101111000 0111 222368899999999999999
Q ss_pred HHHhcCCCCCC
Q psy6391 292 ENALKHKYFAD 302 (313)
Q Consensus 292 ~e~l~h~~~~~ 302 (313)
.+++.||-+-+
T Consensus 326 r~llfHpllfe 336 (458)
T KOG1266|consen 326 RLLLFHPLLFE 336 (458)
T ss_pred hhhhcCceeee
Confidence 99999997644
No 438
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.53 E-value=1.3e-13 Score=109.04 Aligned_cols=139 Identities=19% Similarity=0.198 Sum_probs=98.8
Q ss_pred eeeeccccceEEEEEEeCc------CCcEEEEEEecccCC-----------CC---------CCchhHH----HHHHHHh
Q psy6391 19 VEKIGEGTYGVVYKAKNKV------TGALVAIKKIRMEND-----------DE---------GIPATAI----REISVLK 68 (313)
Q Consensus 19 ~~~lg~g~~~~v~~~~~~~------~~~~~~~K~~~~~~~-----------~~---------~~~~~~~----~e~~~l~ 68 (313)
...||.|..+.||.|.... .+..+|+|+++.... .. .....+. +|+..|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4679999999999998653 357899998753310 00 0111233 6888888
Q ss_pred hcCC--CCceeeceeEEeCcEEEEEEeccccC-HH-HHHhhCCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCceeccCCC
Q psy6391 69 ELNH--PNIVQLHDTMIENYRLYLIFEFMSMD-LK-KYIDTVPKGQFLAADKVKSITYQIFQAILFC-HKRRVLHRDLKP 143 (313)
Q Consensus 69 ~l~~--~~i~~~~~~~~~~~~~~lv~e~~~~~-l~-~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~L-h~~~i~H~di~~ 143 (313)
++.. -++..++++ ...++||||++++ +. ..+.. ..++......+..+++.++..| |+.|++|||+++
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd----~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~ 153 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD----AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSE 153 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc----cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence 8843 345555543 4678999999873 21 12221 2355666778889999999988 899999999999
Q ss_pred CCEEEecCCCeEEEecCCCccccC
Q psy6391 144 QNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 144 ~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
.||++.. +. +.|+||+.+...+
T Consensus 154 ~NIL~~~-~~-v~iIDF~qav~~~ 175 (197)
T cd05146 154 YNMLWHD-GK-VWFIDVSQSVEPT 175 (197)
T ss_pred HHEEEEC-Cc-EEEEECCCceeCC
Confidence 9999974 34 9999999997654
No 439
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.46 E-value=7.4e-13 Score=118.69 Aligned_cols=153 Identities=18% Similarity=0.235 Sum_probs=99.5
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCC-------------------------CC------
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDE-------------------------GI------ 56 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-------------------------~~------ 56 (313)
.+...+..|. .++||.|+.|.||+|+.+ +|+.||||+.+...... +.
T Consensus 112 ~~~~~F~~fd-~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e 189 (437)
T TIGR01982 112 PLEELFAEFE-EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKE 189 (437)
T ss_pred CHHHHHhhCC-CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHH
Confidence 3444555555 478999999999999986 78999999985431000 00
Q ss_pred -------chhHHHHHHHHhhc----CCCCceeeceeE-EeCcEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHH
Q psy6391 57 -------PATAIREISVLKEL----NHPNIVQLHDTM-IENYRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQ 123 (313)
Q Consensus 57 -------~~~~~~e~~~l~~l----~~~~i~~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~ 123 (313)
.-.+.+|+..+.++ ++..-+.+-..+ ...+..++||||++| ++.+.......+ .. ...++.+
T Consensus 190 ~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~--~~---~~~ia~~ 264 (437)
T TIGR01982 190 FEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG--LD---RKALAEN 264 (437)
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcC--CC---HHHHHHH
Confidence 01244455555554 222223333333 334567999999987 555544321111 22 2345555
Q ss_pred HHH-HHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCC
Q psy6391 124 IFQ-AILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGV 168 (313)
Q Consensus 124 i~~-~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~ 168 (313)
++. .+..+|..|++|+|++|.||+++.++. ++++|||++...+.
T Consensus 265 ~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~-i~liDfG~~~~l~~ 309 (437)
T TIGR01982 265 LARSFLNQVLRDGFFHADLHPGNIFVLKDGK-IIALDFGIVGRLSE 309 (437)
T ss_pred HHHHHHHHHHhCCceeCCCCcccEEECCCCc-EEEEeCCCeeECCH
Confidence 555 467889999999999999999988876 99999999977643
No 440
>KOG3087|consensus
Probab=99.45 E-value=2e-12 Score=98.62 Aligned_cols=146 Identities=20% Similarity=0.260 Sum_probs=113.4
Q ss_pred eeeeeccccceEEEEEEeCcCCcEEEEEEecccC-CCC-----CCchhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEE
Q psy6391 18 KVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEN-DDE-----GIPATAIREISVLKELNHPNIVQLHDTMIENYRLYLI 91 (313)
Q Consensus 18 ~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 91 (313)
.+..+.+|+.+.|+.+... |+.++||.-.... ..+ -...+-++|+..+.++.--.|.-+.-++.+.....++
T Consensus 11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 6788899999999999886 8888888543221 111 1224566799999888766777777778888888899
Q ss_pred Eecccc--CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeE--EEecCCCcccc
Q psy6391 92 FEFMSM--DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIV--KVADFGLARAF 166 (313)
Q Consensus 92 ~e~~~~--~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~--~l~df~~~~~~ 166 (313)
|||++| ++.+.+....... ........++++|-+.+.-||..+++||||.++||++..+++.. .++|||++...
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~-~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDE-SEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EEeccchhHHHHHHHHHccCc-ccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 999998 7777777654443 23334478999999999999999999999999999998887654 89999998654
No 441
>KOG0606|consensus
Probab=99.42 E-value=9.9e-14 Score=129.78 Aligned_cols=264 Identities=23% Similarity=0.302 Sum_probs=193.2
Q ss_pred hhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCC-CchhHHHHHHHHhhcCCCCceeeceeEEeCcE
Q psy6391 9 VKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEG-IPATAIREISVLKELNHPNIVQLHDTMIENYR 87 (313)
Q Consensus 9 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 87 (313)
-+...+++.+++.+-+|+++.++.+.-..++.....|+......-.. ..+.+..+-.++-...+|-++.....+.....
T Consensus 799 yrsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP 878 (1205)
T KOG0606|consen 799 YRSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSP 878 (1205)
T ss_pred ccCCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCC
Confidence 45678899999999999999999888776775556665543321111 12223333333333456667766666666778
Q ss_pred EEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 88 LYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 88 ~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
.+++++++++ ++...+... +..+.+..+.....+.+++++||...+.|+|++|.|.+...++. .++++|+.....
T Consensus 879 ~~L~~~~~~~~~~~Skl~~~---~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh-~~l~~~~t~~~v 954 (1205)
T KOG0606|consen 879 LPLVGHYLNGGDLPSKLHNS---GCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGH-RPLTDFGTLSKV 954 (1205)
T ss_pred cchhhHHhccCCchhhhhcC---CCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCC-cccCcccccccc
Confidence 8999999976 666665543 34667777778888999999999999999999999999988887 788888743222
Q ss_pred CCC-------------------------------CcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCC
Q psy6391 167 GVP-------------------------------VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKP 215 (313)
Q Consensus 167 ~~~-------------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~ 215 (313)
+.- ...-....++..|.+||...+.. -..++|.|+.|+++++.++|..
T Consensus 955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~-hgs~ad~~~~g~~l~e~l~g~p 1033 (1205)
T KOG0606|consen 955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRR-HGSAADWWSSGVCLFEVLTGIP 1033 (1205)
T ss_pred ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCccccccc-CCCcchhhhhhhhhhhhhcCCC
Confidence 100 01112235688999999887755 6788999999999999999999
Q ss_pred CCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHH---
Q psy6391 216 LFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAE--- 292 (313)
Q Consensus 216 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~--- 292 (313)
||+...+...++.+.+... .|++.. ...+.+.++++...+..+|.+|..+.
T Consensus 1034 p~na~tpq~~f~ni~~~~~-----~~p~g~---------------------~~~s~~aq~~~~~ll~~~~~qr~~a~~~~ 1087 (1205)
T KOG0606|consen 1034 PFNAETPQQIFENILNRDI-----PWPEGP---------------------EEGSYEAQDLINRLLTEEPTQRLGAKGAA 1087 (1205)
T ss_pred CCCCcchhhhhhccccCCC-----CCCCCc---------------------cccChhhhhhhhhhhccCchhccCccccc
Confidence 9999988877766554322 222211 24789999999999999999999888
Q ss_pred HHhcCCCCCCC
Q psy6391 293 NALKHKYFADK 303 (313)
Q Consensus 293 e~l~h~~~~~~ 303 (313)
++-.|+||+..
T Consensus 1088 e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1088 EVKGHPFFQDV 1098 (1205)
T ss_pred ccccCCccCCC
Confidence 99999999984
No 442
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.42 E-value=1.3e-12 Score=102.62 Aligned_cols=127 Identities=17% Similarity=0.133 Sum_probs=92.4
Q ss_pred eeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCce-eeceeEEeCcEEEEEEecccc
Q psy6391 19 VEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIV-QLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 19 ~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~lv~e~~~~ 97 (313)
++.|+.|..+.||++... +..+++|....... ....+.+|+.+++.+.+.+++ +++.. +....++|||+++|
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~i~G 75 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEFIEG 75 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEecCC
Confidence 578899999999999875 77899998754432 124567899999988654443 44433 23345799999998
Q ss_pred C-HHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-----eeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 98 D-LKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRV-----LHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 98 ~-l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i-----~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
. +... .......+.+++.++..||..++ +|+|++|.||+++ ++. ++++||+.+..
T Consensus 76 ~~l~~~-----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~-~~liDf~~a~~ 136 (170)
T cd05151 76 SELLTE-----------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGR-LWLIDWEYAGM 136 (170)
T ss_pred Cccccc-----------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCe-EEEEecccccC
Confidence 4 2211 01123356789999999999885 9999999999998 444 89999998853
No 443
>KOG3741|consensus
Probab=99.42 E-value=2.3e-11 Score=106.46 Aligned_cols=231 Identities=16% Similarity=0.202 Sum_probs=165.0
Q ss_pred hhhhhccceeeeeeccc---cceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCceeeceeEE--
Q psy6391 9 VKSRLEDYEKVEKIGEG---TYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIVQLHDTMI-- 83 (313)
Q Consensus 9 ~~~~~~~y~~~~~lg~g---~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-- 83 (313)
++.....|.-+..+..- -..+.|+++...+|..|++|++..++.. ..-....-+++++.+.|.|++++.+++.
T Consensus 268 ~p~lv~~~~~L~pl~~~~~~~~~Ttyk~~s~~DG~~YvLkRlhg~r~~--~~nk~t~lve~wkkl~h~NvV~frevf~t~ 345 (655)
T KOG3741|consen 268 IPSLVESFVNLYPLELLNDLFSITTYKATSNVDGNAYVLKRLHGDRDQ--STNKDTSLVEAWKKLCHTNVVPFREVFLTY 345 (655)
T ss_pred CCcchhhhhceeecccccccccceeEeeeeccCCceeeeeeecccccc--CcccchHHHHHHHHhccCceeehhhhhhhh
Confidence 34445555555554432 3478999999999999999999433221 1233446688999999999999999887
Q ss_pred --eCcEEEEEEecccc--CHHHHHhhC------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEE
Q psy6391 84 --ENYRLYLIFEFMSM--DLKKYIDTV------------PKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLL 147 (313)
Q Consensus 84 --~~~~~~lv~e~~~~--~l~~~~~~~------------~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil 147 (313)
.+..+++|++|.++ +|.++.-.- ..+...++..+|.++.|++.||.++|+.|+..+-+.+.+|+
T Consensus 346 tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIl 425 (655)
T KOG3741|consen 346 TFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKIL 425 (655)
T ss_pred ccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeE
Confidence 45678999999986 777664221 12334789999999999999999999999999999999999
Q ss_pred EecCCCeEEEecCCCccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCC-CCCCChHHHH
Q psy6391 148 IDAKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPL-FQGDSEIDQL 226 (313)
Q Consensus 148 ~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~p-f~~~~~~~~~ 226 (313)
++.+.. ++|...|..-...... . |.+. ...+-|.=.||.+++.|.+|..- +.........
T Consensus 426 v~G~~R-IriS~C~i~Dvl~~d~------------~--~~le----~~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~ 486 (655)
T KOG3741|consen 426 VTGKMR-IRISGCGIMDVLQEDP------------T--EPLE----SQQQNDLRDLGLLLLALATGTENSNRTDSTQSSH 486 (655)
T ss_pred eeCcce-EEEecccceeeecCCC------------C--cchh----HHhhhhHHHHHHHHHHHhhcccccccccchHHHH
Confidence 987754 8998888775553321 0 1111 24567899999999999999643 2222222221
Q ss_pred HHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 227 FRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
.+... +..+.++.++|.-+...++++ -++.+++.
T Consensus 487 ~~~I~-----------------------------------~~yS~D~rn~v~yl~s~~~~~-ksI~~llp 520 (655)
T KOG3741|consen 487 LTRIT-----------------------------------TTYSTDLRNVVEYLESLNFRE-KSIQDLLP 520 (655)
T ss_pred HHHhh-----------------------------------hhhhHHHHHHHHHHHhcCccc-ccHHHHHH
Confidence 12111 347888889999999888887 67777765
No 444
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.42 E-value=1.5e-13 Score=124.70 Aligned_cols=153 Identities=16% Similarity=0.260 Sum_probs=99.4
Q ss_pred chhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC-----------------------CC--------
Q psy6391 7 DDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD-----------------------EG-------- 55 (313)
Q Consensus 7 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-----------------------~~-------- 55 (313)
..+...+.+|+. ++||.|+.|+||.|+.+.+|+.||+|+.+..... ..
T Consensus 113 ~~~~~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~ 191 (537)
T PRK04750 113 GPVEEWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVA 191 (537)
T ss_pred CCHHHHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHH
Confidence 455667788887 8999999999999999877999999998754200 00
Q ss_pred -Cc------hhHHHHHHHHhhc----CCCCceeeceeEEe-CcEEEEEEecccc-CHHHHHhhCCCCC----CCCHHHHH
Q psy6391 56 -IP------ATAIREISVLKEL----NHPNIVQLHDTMIE-NYRLYLIFEFMSM-DLKKYIDTVPKGQ----FLAADKVK 118 (313)
Q Consensus 56 -~~------~~~~~e~~~l~~l----~~~~i~~~~~~~~~-~~~~~lv~e~~~~-~l~~~~~~~~~~~----~l~~~~~~ 118 (313)
.. -++.+|+..+.++ .+...+.+-.++.+ ....++||||+.| .+.+.-. ....+ .+.+..+.
T Consensus 192 e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~-l~~~g~d~~~la~~~v~ 270 (537)
T PRK04750 192 EFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAA-LRAAGTDMKLLAERGVE 270 (537)
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHH-HHhcCCCHHHHHHHHHH
Confidence 00 1233344444444 23334444444432 5567899999998 5544321 11111 23333344
Q ss_pred HHHHHHHHHHHHHHhCCceeccCCCCCEEEecCC---CeEEEecCCCccccCC
Q psy6391 119 SITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKS---NIVKVADFGLARAFGV 168 (313)
Q Consensus 119 ~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~---~~~~l~df~~~~~~~~ 168 (313)
.++.|+ ...|++|+|++|.||+++.++ ..++++|||++.....
T Consensus 271 ~~~~Qi-------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 271 VFFTQV-------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHHH-------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 444444 468999999999999999886 2499999999976643
No 445
>KOG0601|consensus
Probab=99.33 E-value=8.5e-13 Score=117.25 Aligned_cols=257 Identities=21% Similarity=0.222 Sum_probs=181.2
Q ss_pred hhhhhccceeeeeeccccceEEEEEEeC-cCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCceeeceeEEeCc
Q psy6391 9 VKSRLEDYEKVEKIGEGTYGVVYKAKNK-VTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQLHDTMIENY 86 (313)
Q Consensus 9 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~-~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 86 (313)
...-..+|..+..||.|.++.|+....+ .++..|++|-.............-..|+.+...+ .|.+++..+..+....
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence 3455678999999999999999987755 5677889887765543333223444677777777 5888888888888888
Q ss_pred EEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 87 RLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 87 ~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
+.++=.||+.+....+... -...+.+...+++..|++.++.++|+..++|.|++|+||++..++...+++||+..+..
T Consensus 340 ~~~ip~e~~~~~s~~l~~~--~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~ 417 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSV--TSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRL 417 (524)
T ss_pred cccCchhhhcCcchhhhhH--HHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhcccccccccc
Confidence 8889999997622222222 12347788889999999999999999999999999999999887554789999888643
Q ss_pred CCCCcccccccccccccc-hhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCC
Q psy6391 167 GVPVRIYTHEVVTLWYRA-PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 245 (313)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~-PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
.... ....+..++.| .|.+........+.|+++||..+.+.+++...-........ +...
T Consensus 418 ~~~~---~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~---i~~~------------- 478 (524)
T KOG0601|consen 418 AFSS---GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSLT---IRSG------------- 478 (524)
T ss_pred ceec---ccccccccccccchhhccccccccccccccccccccccccCcccCccccccee---eecc-------------
Confidence 2111 11122333442 55555555578899999999999999998754333222111 1110
Q ss_pred CCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 246 KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
.++ ..+....+++.+.+.+..+++..||.+.++..|.-|-.
T Consensus 479 -------~~p---------~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 479 -------DTP---------NLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred -------ccc---------CCCchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 000 01234478889999999999999999999998876654
No 446
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.33 E-value=2.2e-11 Score=93.41 Aligned_cols=133 Identities=16% Similarity=0.253 Sum_probs=99.6
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccC-CCCCCc-----hhHHHHHHHHhhcCCCCceeeceeEEeCcEEEEEEe
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMEN-DDEGIP-----ATAIREISVLKELNHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~-----~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
..+++|+.+.++.+... |.++++|.-.... .....- ..-.+|+.++..+..-.+..+.=+..+.+...|+||
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 35788999999999664 5567777543221 222211 234579999999877777777778888888999999
Q ss_pred ccccC-HHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 94 FMSMD-LKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 94 ~~~~~-l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
|++|. |.+.+... .-.+++.+-..+.-||..||+|||+.++||++...+ +.++|||++...
T Consensus 80 ~I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~--i~~IDfGLg~~s 141 (204)
T COG3642 80 YIEGELLKDALEEA----------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR--IYFIDFGLGEFS 141 (204)
T ss_pred EeCChhHHHHHHhc----------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc--EEEEECCccccc
Confidence 99994 44566542 134666788888899999999999999999998764 899999999754
No 447
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.22 E-value=3.9e-10 Score=94.31 Aligned_cols=141 Identities=15% Similarity=0.047 Sum_probs=97.7
Q ss_pred eccccceEEEEEEeCcCCcEEEEEEecccCCCC--------CC-chhHHHHHHHHhhcCCCCce--eeceeEEe-----C
Q psy6391 22 IGEGTYGVVYKAKNKVTGALVAIKKIRMENDDE--------GI-PATAIREISVLKELNHPNIV--QLHDTMIE-----N 85 (313)
Q Consensus 22 lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--------~~-~~~~~~e~~~l~~l~~~~i~--~~~~~~~~-----~ 85 (313)
+-......|.++.. .|+.|.+|......... .. ...+.+|...+..+...+|. .++++.+. .
T Consensus 30 v~~~~~rrvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 30 FRELEGRRTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred EecCCCceEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 33333444556655 47789999764332110 00 11477899988888544433 44556653 2
Q ss_pred cEEEEEEecccc--CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecC------CCeEEE
Q psy6391 86 YRLYLIFEFMSM--DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAK------SNIVKV 157 (313)
Q Consensus 86 ~~~~lv~e~~~~--~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~------~~~~~l 157 (313)
...++|+|++++ +|.+++.... ....+......++.+++..+.-||..|++|+|++++|||++.+ ...+.+
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~L 186 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSV 186 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEE
Confidence 357899999997 6877775321 2335667788999999999999999999999999999999852 345899
Q ss_pred ecCCCccc
Q psy6391 158 ADFGLARA 165 (313)
Q Consensus 158 ~df~~~~~ 165 (313)
+||+.+..
T Consensus 187 IDl~r~~~ 194 (268)
T PRK15123 187 IDLHRAQI 194 (268)
T ss_pred EECCcccc
Confidence 99998854
No 448
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.19 E-value=2.9e-10 Score=93.12 Aligned_cols=141 Identities=16% Similarity=0.221 Sum_probs=98.4
Q ss_pred eeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCC--CceeeceeEEeC---cEEEEEEe
Q psy6391 19 VEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHP--NIVQLHDTMIEN---YRLYLIFE 93 (313)
Q Consensus 19 ~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~i~~~~~~~~~~---~~~~lv~e 93 (313)
.+.|+.|..+.+|++... +|+.+++|........ .....+..|+.+++.+.+. .+.+++.+.... +..++|||
T Consensus 3 ~~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred ceecCCCccceEEEEEec-CCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 467899999999999875 3578999997654432 2346788999999999653 456677766653 36789999
Q ss_pred ccccC-HHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHh---------------------------------------
Q psy6391 94 FMSMD-LKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHK--------------------------------------- 133 (313)
Q Consensus 94 ~~~~~-l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~--------------------------------------- 133 (313)
+++|. +.+.+. ...++......++.+++.+|..||+
T Consensus 81 ~i~G~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (223)
T cd05154 81 RVDGRVLRDRLL----RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPA 156 (223)
T ss_pred EeCCEecCCCCC----CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHH
Confidence 99873 322211 0124555555555666666655552
Q ss_pred -----------------CCceeccCCCCCEEEecC-CCeEEEecCCCccc
Q psy6391 134 -----------------RRVLHRDLKPQNLLIDAK-SNIVKVADFGLARA 165 (313)
Q Consensus 134 -----------------~~i~H~di~~~Nil~~~~-~~~~~l~df~~~~~ 165 (313)
..++|||+.+.||+++.+ ++.+.|+||+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 157 MERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246999999999999884 34478999998854
No 449
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.19 E-value=1.7e-09 Score=92.94 Aligned_cols=251 Identities=12% Similarity=0.080 Sum_probs=154.7
Q ss_pred eeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc-CCCCcee----eceeE--EeC-cEEE
Q psy6391 18 KVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL-NHPNIVQ----LHDTM--IEN-YRLY 89 (313)
Q Consensus 18 ~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~----~~~~~--~~~-~~~~ 89 (313)
..+.||+|+.+.+|-.-.- ...+.|++.....- .-..-+..|... .||-+.. ..... -+. ..+.
T Consensus 15 ~gr~LgqGgea~ly~l~e~---~d~VAKIYh~Pppa-----~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iG 86 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEV---RDQVAKIYHAPPPA-----AQAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIG 86 (637)
T ss_pred CCccccCCccceeeecchh---hchhheeecCCCch-----HHHHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeE
Confidence 3467999999999966432 23466887654311 111222333333 4553322 11111 122 2378
Q ss_pred EEEecccc--CHHHHHhh---CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCcc
Q psy6391 90 LIFEFMSM--DLKKYIDT---VPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLAR 164 (313)
Q Consensus 90 lv~e~~~~--~l~~~~~~---~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~ 164 (313)
+.|+.+.| .+..+++- ...-....+.-+.++++.++.+...||..|.+-||++++|+|+..++. +.|+|=+...
T Consensus 87 flmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~-V~LVdsDsfq 165 (637)
T COG4248 87 FLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSK-VVLVDSDSFQ 165 (637)
T ss_pred EecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCce-EEEEccccee
Confidence 88998876 44444432 112223678889999999999999999999999999999999988876 8898765443
Q ss_pred ccCCCCcccccccccccccchhhhc----CCCCCCcchhHhHHHHHHHHHHhC-CCCCCCC-------ChHHHHHHHHHh
Q psy6391 165 AFGVPVRIYTHEVVTLWYRAPEVLL----GSQRYSCPVDVWSIGCIFAEIATR-KPLFQGD-------SEIDQLFRIFRV 232 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~PE~~~----~~~~~~~~~Di~slG~~l~~ll~g-~~pf~~~-------~~~~~~~~~~~~ 232 (313)
.. .+.......+|...|.+||... ..-.-+..+|.|.||+++++++.| .+||.+. .+.+ ..+...
T Consensus 166 i~-~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E--~~Ia~g 242 (637)
T COG4248 166 IN-ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLE--TDIAHG 242 (637)
T ss_pred ec-cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcch--hhhhcc
Confidence 33 3445556678999999999853 112356789999999999999987 8999753 1111 011110
Q ss_pred cCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccC--CCCCCCHHH
Q psy6391 233 LTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC--PATRINAEN 293 (313)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d--p~~Rps~~e 293 (313)
...-..+ +.....+. -....+..++++++.+..+|+... ++-|||++.
T Consensus 243 ~f~ya~~---------~~~g~~p~----P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 243 RFAYASD---------QRRGLKPP----PRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred eeeechh---------ccCCCCCC----CCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 0000000 00000000 001112357899999999999853 568998764
No 450
>KOG2137|consensus
Probab=99.19 E-value=1.1e-11 Score=112.04 Aligned_cols=154 Identities=22% Similarity=0.322 Sum_probs=112.7
Q ss_pred HHHHHHHHHHhC-CceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc---------ccccccccccccchhhhcCCC
Q psy6391 123 QIFQAILFCHKR-RVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR---------IYTHEVVTLWYRAPEVLLGSQ 192 (313)
Q Consensus 123 ~i~~~l~~Lh~~-~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~---------~~~~~~~~~~~~~PE~~~~~~ 192 (313)
+...|+.++|.. ++||++|.|++|.++..+. .||+.|+++.....+.+ ..........|.+||.+.. .
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~-wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~-~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGD-WKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG-T 184 (700)
T ss_pred cccchhhhhccCcceeecccchhheeeccCcc-eeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc-c
Confidence 344899999964 8999999999999999987 99999998876544222 1111233678999999876 4
Q ss_pred CCCcchhHhHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCH
Q psy6391 193 RYSCPVDVWSIGCIFAEIA-TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 271 (313)
Q Consensus 193 ~~~~~~Di~slG~~l~~ll-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (313)
..+.++|+||+|+++|.+. .|+.-+................... .... -..+|+
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~-~~~~------------------------s~~~p~ 239 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAG-AFGY------------------------SNNLPS 239 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccc-cccc------------------------cccCcH
Confidence 5899999999999999998 4555555443333222222111000 0000 036899
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 272 DGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 272 ~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
++.+=+.+++..++.-||++.+++..|||.+.
T Consensus 240 el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~ 271 (700)
T KOG2137|consen 240 ELRESLKKLLNGDSAVRPTLDLLLSIPFFSDP 271 (700)
T ss_pred HHHHHHHHHhcCCcccCcchhhhhcccccCCc
Confidence 99999999999999999999999999999985
No 451
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.15 E-value=5e-10 Score=88.40 Aligned_cols=128 Identities=27% Similarity=0.344 Sum_probs=79.6
Q ss_pred EEEEEEeCcCCcEEEEEEecccCCC-----------CC--------C-----chhHHHHHHHHhhcCCC--CceeeceeE
Q psy6391 29 VVYKAKNKVTGALVAIKKIRMENDD-----------EG--------I-----PATAIREISVLKELNHP--NIVQLHDTM 82 (313)
Q Consensus 29 ~v~~~~~~~~~~~~~~K~~~~~~~~-----------~~--------~-----~~~~~~e~~~l~~l~~~--~i~~~~~~~ 82 (313)
.||.|... ++..+|+|+.+..... .+ . .....+|+..|+++..- ++.+++++
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~- 78 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY- 78 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE-
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE-
Confidence 48888875 6779999987643111 00 0 02345799999999655 34555533
Q ss_pred EeCcEEEEEEeccc--cCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHH-HHHhCCceeccCCCCCEEEecCCCeEEEec
Q psy6391 83 IENYRLYLIFEFMS--MDLKKYIDTVPKGQFLAADKVKSITYQIFQAIL-FCHKRRVLHRDLKPQNLLIDAKSNIVKVAD 159 (313)
Q Consensus 83 ~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~-~Lh~~~i~H~di~~~Nil~~~~~~~~~l~d 159 (313)
...++||||++ |.....+.... ++......++.+++..+. .+|..|++|||+++.||+++.+ . +.++|
T Consensus 79 ---~~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~-~~iID 149 (188)
T PF01163_consen 79 ---NRNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-K-VYIID 149 (188)
T ss_dssp ---ETTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-C-EEE--
T ss_pred ---eCCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-e-EEEEe
Confidence 23469999999 63223333221 223456667778888544 4679999999999999999877 4 99999
Q ss_pred CCCccccC
Q psy6391 160 FGLARAFG 167 (313)
Q Consensus 160 f~~~~~~~ 167 (313)
||.+....
T Consensus 150 f~qav~~~ 157 (188)
T PF01163_consen 150 FGQAVDSS 157 (188)
T ss_dssp GTTEEETT
T ss_pred cCcceecC
Confidence 99997654
No 452
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.08 E-value=1e-09 Score=89.37 Aligned_cols=139 Identities=22% Similarity=0.249 Sum_probs=100.1
Q ss_pred eeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC----------------C----CCCchhHHHHHHHHhhcCCC--C
Q psy6391 17 EKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND----------------D----EGIPATAIREISVLKELNHP--N 74 (313)
Q Consensus 17 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~----------------~----~~~~~~~~~e~~~l~~l~~~--~ 74 (313)
.+..+||.|..|.||.|... .|.++++|.=+.... . .-......+|...|+.+... .
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred hhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 35688999999999999987 678999995322110 0 01113456789999998544 5
Q ss_pred ceeeceeEEeCcEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCe
Q psy6391 75 IVQLHDTMIENYRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNI 154 (313)
Q Consensus 75 i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~ 154 (313)
+..+++. +...+|||+++|-...-.. +..+....++..|+..+..+-..|++|||+++-||+++++|+
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~- 240 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGD- 240 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCC-
Confidence 5555543 5778999999994111111 234455666777888777777999999999999999999988
Q ss_pred EEEecCCCccccCC
Q psy6391 155 VKVADFGLARAFGV 168 (313)
Q Consensus 155 ~~l~df~~~~~~~~ 168 (313)
+.++||-.+...+.
T Consensus 241 ~~vIDwPQ~v~~~h 254 (304)
T COG0478 241 IVVIDWPQAVPISH 254 (304)
T ss_pred EEEEeCcccccCCC
Confidence 99999998876543
No 453
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=99.03 E-value=8.9e-09 Score=83.29 Aligned_cols=106 Identities=24% Similarity=0.286 Sum_probs=82.6
Q ss_pred hhHHHHHHHHhhcC--CCCceeeceeEEeC----cEEEEEEecccc--CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHH
Q psy6391 58 ATAIREISVLKELN--HPNIVQLHDTMIEN----YRLYLIFEFMSM--DLKKYIDTVPKGQFLAADKVKSITYQIFQAIL 129 (313)
Q Consensus 58 ~~~~~e~~~l~~l~--~~~i~~~~~~~~~~----~~~~lv~e~~~~--~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~ 129 (313)
....+|...+..+. .-....++++.+.. ...++|+|++++ +|.+++..... .+......++.+++..+.
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALARLIA 132 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHHHHHH
Confidence 46778888888874 33355666666542 256899999987 67777775332 566778889999999999
Q ss_pred HHHhCCceeccCCCCCEEEecCC--CeEEEecCCCcccc
Q psy6391 130 FCHKRRVLHRDLKPQNLLIDAKS--NIVKVADFGLARAF 166 (313)
Q Consensus 130 ~Lh~~~i~H~di~~~Nil~~~~~--~~~~l~df~~~~~~ 166 (313)
-||..|++|+|+++.|||++.++ ..+.++||+.+...
T Consensus 133 ~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 133 KLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999999999999999998886 23899999988653
No 454
>PRK09902 hypothetical protein; Provisional
Probab=99.01 E-value=1.8e-08 Score=80.20 Aligned_cols=141 Identities=13% Similarity=0.090 Sum_probs=101.1
Q ss_pred ccccceEEEEEEeCcCCcEEEEEEecccCCC----CCCchhHHHHHHHHhhcCC--CCceeeceeEE--eC--cEEEEEE
Q psy6391 23 GEGTYGVVYKAKNKVTGALVAIKKIRMENDD----EGIPATAIREISVLKELNH--PNIVQLHDTMI--EN--YRLYLIF 92 (313)
Q Consensus 23 g~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~----~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~--~~--~~~~lv~ 92 (313)
|+||-+.|+..... |+.+-+|.-...... ..-...+.+|...++.+.. -.+.+++..-. .+ -+.+||+
T Consensus 27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 55888999998765 557888876522111 1223678899999998842 22555552221 11 2568999
Q ss_pred ecccc--CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCC-eEEEecCCCcccc
Q psy6391 93 EFMSM--DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSN-IVKVADFGLARAF 166 (313)
Q Consensus 93 e~~~~--~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~-~~~l~df~~~~~~ 166 (313)
|-++| +|.+++.... ..+.+......++.+++.+++-||+.|+.|+|+.+.||+++.++. .+.++||+-+...
T Consensus 105 e~L~g~~~L~~~l~~~~-~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 105 EDMAGFISIADWYAQHA-VSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred EeCCCCccHHHHHhcCC-cCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 99986 8888775422 223567777889999999999999999999999999999985553 4899999987543
No 455
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.78 E-value=2.1e-07 Score=74.43 Aligned_cols=135 Identities=19% Similarity=0.227 Sum_probs=87.1
Q ss_pred ccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchh---------HHHHHHHHhhcC---CCCceeecee
Q psy6391 14 EDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPAT---------AIREISVLKELN---HPNIVQLHDT 81 (313)
Q Consensus 14 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~---------~~~e~~~l~~l~---~~~i~~~~~~ 81 (313)
.+|.+.+.+.......|-+..- +|..+++|..+...... .+. ..+.+..+..+. ......++.+
T Consensus 31 ~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~--er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~ 106 (229)
T PF06176_consen 31 NNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRP--ERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA 106 (229)
T ss_pred CCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhH--HHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence 5677888887777777766654 47899999886543221 111 223333344443 3333333333
Q ss_pred EE-----eCcEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeE
Q psy6391 82 MI-----ENYRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIV 155 (313)
Q Consensus 82 ~~-----~~~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~ 155 (313)
.+ .....+++|||++| .|.+... +++ .++..|.+++.-||+.|++|||..|.|++++.++ +
T Consensus 107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~--i 173 (229)
T PF06176_consen 107 AEKKIFRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG--I 173 (229)
T ss_pred eeeeeccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc--E
Confidence 33 22456789999999 4333321 222 2445677889999999999999999999998654 8
Q ss_pred EEecCCCccc
Q psy6391 156 KVADFGLARA 165 (313)
Q Consensus 156 ~l~df~~~~~ 165 (313)
+++|++....
T Consensus 174 ~iID~~~k~~ 183 (229)
T PF06176_consen 174 RIIDTQGKRM 183 (229)
T ss_pred EEEECccccc
Confidence 9999987643
No 456
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.72 E-value=3.9e-08 Score=79.44 Aligned_cols=138 Identities=20% Similarity=0.202 Sum_probs=90.0
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCCCCC----------------Cchh------HHHHHHHHhhcC--CCCc
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEG----------------IPAT------AIREISVLKELN--HPNI 75 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~----------------~~~~------~~~e~~~l~~l~--~~~i 75 (313)
..|++|..+.||.|... ++..+|+|+++....... .... ...|+.-|+++. +-.+
T Consensus 54 g~istGKEA~Vy~a~~~-~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrv 132 (268)
T COG1718 54 GCISTGKEANVYLAETG-DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRV 132 (268)
T ss_pred eeecCCcceEEEeeccC-CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 45667778899998764 678999999865421110 0011 112444455542 3333
Q ss_pred eeeceeEEeCcEEEEEEeccccC--HHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCCEEEecCC
Q psy6391 76 VQLHDTMIENYRLYLIFEFMSMD--LKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHK-RRVLHRDLKPQNLLIDAKS 152 (313)
Q Consensus 76 ~~~~~~~~~~~~~~lv~e~~~~~--l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~-~~i~H~di~~~Nil~~~~~ 152 (313)
.+++++. .-++|||+++.. -...+. .-+++......+..+++..+.-|-. .|+|||||+.=|||+. ++
T Consensus 133 P~Pi~~~----~nVLvMEfIg~~g~pAP~Lk----Dv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~ 203 (268)
T COG1718 133 PEPIAFR----NNVLVMEFIGDDGLPAPRLK----DVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DG 203 (268)
T ss_pred CCceeec----CCeEEEEeccCCCCCCCCcc----cCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CC
Confidence 3444332 447999999853 111222 2224444677788899998887776 8999999999999999 44
Q ss_pred CeEEEecCCCccccCC
Q psy6391 153 NIVKVADFGLARAFGV 168 (313)
Q Consensus 153 ~~~~l~df~~~~~~~~ 168 (313)
. +.++||+.+.....
T Consensus 204 ~-p~iID~~QaV~~~h 218 (268)
T COG1718 204 E-PYIIDVSQAVTIDH 218 (268)
T ss_pred e-EEEEECccccccCC
Confidence 4 99999999987653
No 457
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.60 E-value=1e-06 Score=72.21 Aligned_cols=71 Identities=21% Similarity=0.192 Sum_probs=53.6
Q ss_pred eeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCC--ceeeceeEEeCcEEEEEEecccc
Q psy6391 20 EKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPN--IVQLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 20 ~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~--i~~~~~~~~~~~~~~lv~e~~~~ 97 (313)
.+||.|..+.||+. .+..+++|...... ....+.+|.++++.+..-. +.+++++..+.+...+||++++|
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G 78 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG 78 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence 67899999999984 24467889876422 2356788999999985333 46778887788888999999988
Q ss_pred C
Q psy6391 98 D 98 (313)
Q Consensus 98 ~ 98 (313)
.
T Consensus 79 ~ 79 (226)
T TIGR02172 79 K 79 (226)
T ss_pred c
Confidence 3
No 458
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.52 E-value=2.9e-07 Score=83.60 Aligned_cols=153 Identities=17% Similarity=0.224 Sum_probs=95.7
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCC--------------------C----CCc------
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDD--------------------E----GIP------ 57 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~--------------------~----~~~------ 57 (313)
.+...+.+|.. .+|+.++-|+||.|..+ +|+.||||+.+..-.. . -..
T Consensus 120 ~iee~F~eF~~-~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e 197 (517)
T COG0661 120 PIEELFSEFEP-EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDE 197 (517)
T ss_pred CHHHHHHHcCC-CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHH
Confidence 45555556533 78999999999999988 5999999987543100 0 000
Q ss_pred --------hhHHHHHHHHhhc-----CCCCceeeceeEEeCcEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHH
Q psy6391 58 --------ATAIREISVLKEL-----NHPNIVQLHDTMIENYRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQ 123 (313)
Q Consensus 58 --------~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~ 123 (313)
-++.+|+.-+.++ +.+.+.-+.=+.+..+.-+++|||++| .+.+.... .. ...+...+.. .
T Consensus 198 ~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l-~~-~g~d~k~ia~---~ 272 (517)
T COG0661 198 FEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAAL-KS-AGIDRKELAE---L 272 (517)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHH-Hh-cCCCHHHHHH---H
Confidence 1233344444444 234433333344456677899999998 44444222 11 2244333332 2
Q ss_pred HHHH-HHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCC
Q psy6391 124 IFQA-ILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGV 168 (313)
Q Consensus 124 i~~~-l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~ 168 (313)
++.+ +..+-..|++|+|..|.||+++.++. +.+.|||.+...+.
T Consensus 273 ~~~~f~~q~~~dgffHaDpHpGNi~v~~~g~-i~~lDfGi~g~l~~ 317 (517)
T COG0661 273 LVRAFLRQLLRDGFFHADPHPGNILVRSDGR-IVLLDFGIVGRLDP 317 (517)
T ss_pred HHHHHHHHHHhcCccccCCCccceEEecCCc-EEEEcCcceecCCH
Confidence 2222 23344589999999999999999977 89999999976644
No 459
>KOG1035|consensus
Probab=98.43 E-value=1.5e-06 Score=83.68 Aligned_cols=204 Identities=17% Similarity=0.245 Sum_probs=134.9
Q ss_pred HHHHHHhhcCCCCceeeceeEEeCcEEEEE----Eecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy6391 62 REISVLKELNHPNIVQLHDTMIENYRLYLI----FEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRV 136 (313)
Q Consensus 62 ~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv----~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i 136 (313)
.|+..+....|+|++.+..|........++ .++++. ++...++.. +..+...++.+..+++.++.++|+...
T Consensus 231 ~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v---~~i~~~~~r~~~~~~~~GL~~~h~~~l 307 (1351)
T KOG1035|consen 231 IELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSV---GSIPLETLRILHQKLLEGLAYLHSLSL 307 (1351)
T ss_pred HHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhc---cccCHHHHHHHHHHHhhhHHHHHHhcc
Confidence 356667777899999999987755433333 344554 666666653 348889999999999999999999866
Q ss_pred eeccCCCC---CEEEecCCCeEEEe--cCCCccccCCCCcccccccccccccchhhhcCCC-CCCcchhHhHHHHHHHHH
Q psy6391 137 LHRDLKPQ---NLLIDAKSNIVKVA--DFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQ-RYSCPVDVWSIGCIFAEI 210 (313)
Q Consensus 137 ~H~di~~~---Nil~~~~~~~~~l~--df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~~Di~slG~~l~~l 210 (313)
.|.-+..+ +.-++.++. +.++ ||+.+....+....... .....+.++|....+. ......|+|++|.....+
T Consensus 308 ~~v~L~~s~~~~~~~~~e~~-~~~sl~~~~ss~~l~d~~~~~~~-~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~ 385 (1351)
T KOG1035|consen 308 EHVVLSASSSKESTVDGEGV-VAISLSDFDSSKPLPDNEKSFSD-LLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQL 385 (1351)
T ss_pred ceeEEecccccccccCccce-eecchhhhcccccCCCcccchhh-cCccccccccccccccchhhhhhHHHHHHHHHhhh
Confidence 66655555 444444443 5555 88888776554332222 2334456666553322 234457999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCC
Q psy6391 211 ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN 290 (313)
Q Consensus 211 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 290 (313)
..|..+-........ ... .....+..++..+|+..++.+|++
T Consensus 386 ~~~~~i~~~~~~~~~---~l~-----------------------------------~~~~~~~~d~~~~~~~~~~~~Rl~ 427 (1351)
T KOG1035|consen 386 SQGEDISEKSAVPVS---LLD-----------------------------------VLSTSELLDALPKCLDEDSEERLS 427 (1351)
T ss_pred hhcCcccccccchhh---hhc-----------------------------------cccchhhhhhhhhhcchhhhhccc
Confidence 887654332111000 000 011227889999999999999999
Q ss_pred HHHHhcCCCCCCCCCCCC
Q psy6391 291 AENALKHKYFADKTDLPK 308 (313)
Q Consensus 291 ~~e~l~h~~~~~~~~~~~ 308 (313)
+.+++.|+|.+.+.+.+.
T Consensus 428 ~~~ll~~~f~~~~~~~~~ 445 (1351)
T KOG1035|consen 428 ALELLTHPFLRFPTDNES 445 (1351)
T ss_pred hhhhhhchhccccccccc
Confidence 999999999998755543
No 460
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.42 E-value=3.1e-06 Score=64.94 Aligned_cols=130 Identities=18% Similarity=0.201 Sum_probs=90.0
Q ss_pred eeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCce-eeceeEEeCcEEEEEEecc
Q psy6391 17 EKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIV-QLHDTMIENYRLYLIFEFM 95 (313)
Q Consensus 17 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~lv~e~~ 95 (313)
++.+.|++|..|.||.+.+. |..+++|+-+.+.. ...+..|+++++.+.-.++. +++.|-++. +.|||+
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~ds~----r~~l~kEakiLeil~g~~~~p~vy~yg~~~----i~me~i 94 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWR--GGEVALKVRRRDSP----RRNLEKEAKILEILAGEGVTPEVYFYGEDF----IRMEYI 94 (201)
T ss_pred hhhhhhhcccccEEEEeecc--CceEEEEEecCCcc----hhhHHHHHHHHHHhhhcCCCceEEEechhh----hhhhhh
Confidence 45678999999999999987 66899998765543 36788999999998655444 344443333 449999
Q ss_pred cc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCC-CCCEEEecCCCeEEEecCCCccccC
Q psy6391 96 SM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLK-PQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 96 ~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~-~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
.| .|.+.... .+..++ ..+++..--|-..||-|+.|+ |...++..++. +.|+||+.++...
T Consensus 95 ~G~~L~~~~~~------~~rk~l----~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~-~~iIDFd~At~k~ 157 (201)
T COG2112 95 DGRPLGKLEIG------GDRKHL----LRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRD-VYIIDFDSATFKK 157 (201)
T ss_pred cCcchhhhhhc------ccHHHH----HHHHHHHHHHHHhccchhhhcCCceeEEecCCc-EEEEEccchhhcc
Confidence 98 66555442 123333 346666666778899999886 44444444444 9999999997443
No 461
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.30 E-value=1.6e-05 Score=66.19 Aligned_cols=71 Identities=20% Similarity=0.197 Sum_probs=51.4
Q ss_pred eeeccccc-eEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcC-CCCceeeceeEEeCcEEEEEEecccc
Q psy6391 20 EKIGEGTY-GVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELN-HPNIVQLHDTMIENYRLYLIFEFMSM 97 (313)
Q Consensus 20 ~~lg~g~~-~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (313)
..|..|.+ +.||++... +..+++|...... ...+.+|+.+++.+. +--+.+++++...++..++||++++|
T Consensus 4 ~~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G 76 (244)
T cd05150 4 ERVTEGQSGATVYRLDGK--NPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPG 76 (244)
T ss_pred eecCCCCCcCeEEEEcCC--CCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCC
Confidence 34556666 789999764 4678888875432 245678999888883 44466777777776778999999988
No 462
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.30 E-value=1.7e-05 Score=65.28 Aligned_cols=73 Identities=19% Similarity=0.226 Sum_probs=51.9
Q ss_pred eeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCC--CceeeceeEE---eCcEEEEEEe
Q psy6391 19 VEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHP--NIVQLHDTMI---ENYRLYLIFE 93 (313)
Q Consensus 19 ~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~i~~~~~~~~---~~~~~~lv~e 93 (313)
++.|+.|..+.||.+.... ..+++|..... .....+.+|+.+++.+... .+.+++.... .....+++|+
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~ 75 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLME 75 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEE
Confidence 5789999999999998873 58999997654 2236677888888888432 3456665443 3345799999
Q ss_pred cccc
Q psy6391 94 FMSM 97 (313)
Q Consensus 94 ~~~~ 97 (313)
+++|
T Consensus 76 ~i~g 79 (239)
T PF01636_consen 76 YIPG 79 (239)
T ss_dssp EESS
T ss_pred Eecc
Confidence 9987
No 463
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.25 E-value=1.7e-05 Score=63.22 Aligned_cols=133 Identities=19% Similarity=0.310 Sum_probs=92.5
Q ss_pred eeeeccccceEEEEEEeCcCCcEEEEEEecccC--------------CCCCCchhHHHHHHHHhhcC------CCCceee
Q psy6391 19 VEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEN--------------DDEGIPATAIREISVLKELN------HPNIVQL 78 (313)
Q Consensus 19 ~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~--------------~~~~~~~~~~~e~~~l~~l~------~~~i~~~ 78 (313)
...||+|+.-.||.--+ ....+||+..... ..........+|+.....+. +.+|.++
T Consensus 6 ~~~i~~G~~R~cy~HP~---dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 6 SDLIAQGGERDCYQHPD---DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CcccccCCCceEEECCC---CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 46799999999996543 3456899987765 11112355666776666655 8899999
Q ss_pred ceeEEeCcEEEEEEeccc---c----CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecC
Q psy6391 79 HDTMIENYRLYLIFEFMS---M----DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAK 151 (313)
Q Consensus 79 ~~~~~~~~~~~lv~e~~~---~----~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~ 151 (313)
+|..+.+....+|+|.+. | +|.+++.. +.+++ ++.+ .+-....+|-+.+|+.+|++|.||++...
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~----~~~~~-~~~~---~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~ 154 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKE----GGLTE-ELRQ---ALDEFKRYLLDHHIVIRDLNPHNIVVQRR 154 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHHc----CCccH-HHHH---HHHHHHHHHHHcCCeecCCCcccEEEEec
Confidence 999999988899998772 3 66666632 23555 4443 34445568889999999999999999544
Q ss_pred C--C-eEEEec-CCC
Q psy6391 152 S--N-IVKVAD-FGL 162 (313)
Q Consensus 152 ~--~-~~~l~d-f~~ 162 (313)
+ . .+.|+| ||.
T Consensus 155 ~~~~~~lvlIDG~G~ 169 (199)
T PF10707_consen 155 DSGEFRLVLIDGLGE 169 (199)
T ss_pred CCCceEEEEEeCCCC
Confidence 4 2 467776 443
No 464
>PLN02876 acyl-CoA dehydrogenase
Probab=98.23 E-value=2.3e-05 Score=76.53 Aligned_cols=80 Identities=18% Similarity=0.217 Sum_probs=56.2
Q ss_pred eeeeeccccceEEEEEEeCcCC--cEEEEEEecccCCCCCCchhHHHHHHHHhhcC-CCCc--eeeceeEEeC---cEEE
Q psy6391 18 KVEKIGEGTYGVVYKAKNKVTG--ALVAIKKIRMENDDEGIPATAIREISVLKELN-HPNI--VQLHDTMIEN---YRLY 89 (313)
Q Consensus 18 ~~~~lg~g~~~~v~~~~~~~~~--~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i--~~~~~~~~~~---~~~~ 89 (313)
-++.++.|.+..+|+......+ ..+++|+....... .....+.+|+.+++.+. |.++ .+++.++.+. +..+
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~-~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~f 120 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLL-QSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAF 120 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccC-ccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCce
Confidence 3677889999999998765332 46788876543211 11246789999999995 5654 6777777654 4678
Q ss_pred EEEeccccC
Q psy6391 90 LIFEFMSMD 98 (313)
Q Consensus 90 lv~e~~~~~ 98 (313)
+|||+++|.
T Consensus 121 lVME~v~G~ 129 (822)
T PLN02876 121 YIMEYLEGR 129 (822)
T ss_pred EEEEecCCc
Confidence 999999873
No 465
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.08 E-value=0.00013 Score=57.82 Aligned_cols=128 Identities=25% Similarity=0.360 Sum_probs=89.4
Q ss_pred hccceeeeeeccccc-eEEEEEEeCcCCcEEEEEEecc---cCCC---------C-------CCchhHHHHHHHHhhc--
Q psy6391 13 LEDYEKVEKIGEGTY-GVVYKAKNKVTGALVAIKKIRM---ENDD---------E-------GIPATAIREISVLKEL-- 70 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~-~~v~~~~~~~~~~~~~~K~~~~---~~~~---------~-------~~~~~~~~e~~~l~~l-- 70 (313)
..+++.++.||.|.- |.||++... |+.||+|+++. .... . .....|..|.+..-++
T Consensus 36 ~~~I~flefLg~g~~~~~V~kv~I~--g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke 113 (207)
T PF13095_consen 36 GDDIEFLEFLGHGSHDGYVFKVEID--GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKE 113 (207)
T ss_pred CCcEeeeeecCCCCceeEEEEEEEC--CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHh
Confidence 378899999999999 999999875 78999999322 1110 0 1223566677766666
Q ss_pred -CCCCc--eeeceeEEeC------------------cEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHH
Q psy6391 71 -NHPNI--VQLHDTMIEN------------------YRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAIL 129 (313)
Q Consensus 71 -~~~~i--~~~~~~~~~~------------------~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~ 129 (313)
.+.++ ++++|+..-. ....||.||+...- .++...+ .+|+.-+.
T Consensus 114 ~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~~~~~----~~~~~dl~ 178 (207)
T PF13095_consen 114 AGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQIRDI----PQMLRDLK 178 (207)
T ss_pred ccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccchhHH----HHHHHHHH
Confidence 45555 8999987411 12456777766531 1333344 46777788
Q ss_pred HHHhCCceeccCCCCCEEEecCCCeEEEecCCCc
Q psy6391 130 FCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLA 163 (313)
Q Consensus 130 ~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~ 163 (313)
.+|..||+-+|+++.|.. + -+|+|||.+
T Consensus 179 ~~~k~gI~~~Dv~~~ny~---~---G~lvDfs~~ 206 (207)
T PF13095_consen 179 ILHKLGIVPRDVKPRNYR---G---GKLVDFSSS 206 (207)
T ss_pred HHHHCCeeeccCcccccc---C---CEEEecccC
Confidence 899999999999999996 2 489999865
No 466
>KOG2270|consensus
Probab=98.06 E-value=6.6e-05 Score=64.44 Aligned_cols=144 Identities=24% Similarity=0.278 Sum_probs=98.0
Q ss_pred eeeeeccccceEEEEEEeCcCCcEEEEEEecccC----C---------------CCCCchh---H--HHHHHHHhhcCCC
Q psy6391 18 KVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEN----D---------------DEGIPAT---A--IREISVLKELNHP 73 (313)
Q Consensus 18 ~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~----~---------------~~~~~~~---~--~~e~~~l~~l~~~ 73 (313)
+-..|..|..+.||.+... +|..+|||+++... . ....++. . ..|..-|+++...
T Consensus 148 inGCiSTGKEANVYHat~~-dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 148 INGCISTGKEANVYHATEE-DGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred cccccccCccceeEeeecC-CCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 4567889999999999866 78889999875321 0 0011111 1 1366667777555
Q ss_pred CceeeceeEEeCcEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCceeccCCCCCEEEecCC
Q psy6391 74 NIVQLHDTMIENYRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCH-KRRVLHRDLKPQNLLIDAKS 152 (313)
Q Consensus 74 ~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh-~~~i~H~di~~~Nil~~~~~ 152 (313)
.|..+--+... ..++||++++.+ .+-.-.-....++...+..+..+++.-++-|- .+++||.||+--|+|+...
T Consensus 227 GIP~PePIlLk--~hVLVM~FlGrd--gw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~LyhdG- 301 (520)
T KOG2270|consen 227 GIPCPEPILLK--NHVLVMEFLGRD--GWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYHDG- 301 (520)
T ss_pred CCCCCCceeee--cceEeeeeccCC--CCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEECC-
Confidence 54433333222 467999999853 12111113445788889999999999888776 5699999999999999754
Q ss_pred CeEEEecCCCccccCC
Q psy6391 153 NIVKVADFGLARAFGV 168 (313)
Q Consensus 153 ~~~~l~df~~~~~~~~ 168 (313)
. +.++|.+.+...+-
T Consensus 302 ~-lyiIDVSQSVE~DH 316 (520)
T KOG2270|consen 302 K-LYIIDVSQSVEHDH 316 (520)
T ss_pred E-EEEEEccccccCCC
Confidence 4 99999999876543
No 467
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.95 E-value=0.00025 Score=58.55 Aligned_cols=72 Identities=21% Similarity=0.259 Sum_probs=46.0
Q ss_pred eeeeccccceEEEEEEeCc-CCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCc-eeeceeEEeCcEEEEEEeccc
Q psy6391 19 VEKIGEGTYGVVYKAKNKV-TGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNI-VQLHDTMIENYRLYLIFEFMS 96 (313)
Q Consensus 19 ~~~lg~g~~~~v~~~~~~~-~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~~~ 96 (313)
++.|..|-...+|++.... .++.|++|+...... ..-...+|+.+++.+...++ .++++... -.++|||++
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~---~~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~ 75 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE---LIIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIP 75 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc---ceecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeC
Confidence 5678888889999997553 256789997754321 11334578888888854333 33433322 247999997
Q ss_pred c
Q psy6391 97 M 97 (313)
Q Consensus 97 ~ 97 (313)
|
T Consensus 76 G 76 (235)
T cd05157 76 G 76 (235)
T ss_pred C
Confidence 6
No 468
>KOG1235|consensus
Probab=97.95 E-value=0.00018 Score=65.60 Aligned_cols=154 Identities=18% Similarity=0.227 Sum_probs=93.2
Q ss_pred CchhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCC----------------------C--------
Q psy6391 6 TDDVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDE----------------------G-------- 55 (313)
Q Consensus 6 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~----------------------~-------- 55 (313)
+..+...+..| ..+.||..+.|+|++|+.+. |+.||+|+-+..-... .
T Consensus 154 G~~ie~if~~f-~~~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~ 231 (538)
T KOG1235|consen 154 GAPIEDIFSEF-DEEPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEI 231 (538)
T ss_pred CCCHHHHHHhc-CcchhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHH
Confidence 34455556655 45789999999999999884 9999999864331110 0
Q ss_pred -----CchhHHHHHHHHhh----cCCCC---ceeeceeEE-eCcEEEEEEecccc-CHH--HHHhhCCCCCCCCHHHHHH
Q psy6391 56 -----IPATAIREISVLKE----LNHPN---IVQLHDTMI-ENYRLYLIFEFMSM-DLK--KYIDTVPKGQFLAADKVKS 119 (313)
Q Consensus 56 -----~~~~~~~e~~~l~~----l~~~~---i~~~~~~~~-~~~~~~lv~e~~~~-~l~--~~~~~~~~~~~l~~~~~~~ 119 (313)
..-++.+|++-..+ +.|-+ -+.+=.++. ....-+++|||++| .+. +.+.. .+ ++...
T Consensus 232 ~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~---~g-i~~~~--- 304 (538)
T KOG1235|consen 232 AKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDK---RG-ISPHD--- 304 (538)
T ss_pred HhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHH---cC-CCHHH---
Confidence 00123344433333 33444 122333333 33467899999998 222 33332 22 44443
Q ss_pred HHHHHHHHHH-HHHhCCceeccCCCCCEEEec---CCCeEEEecCCCccccCC
Q psy6391 120 ITYQIFQAIL-FCHKRRVLHRDLKPQNLLIDA---KSNIVKVADFGLARAFGV 168 (313)
Q Consensus 120 ~~~~i~~~l~-~Lh~~~i~H~di~~~Nil~~~---~~~~~~l~df~~~~~~~~ 168 (313)
++..+.++.. -+-..|++|+|=.|.||+++. .+..+.+-|||+......
T Consensus 305 i~~~l~~~~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 305 ILNKLVEAYLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HHHHHHHHHHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 3344444422 334679999999999999984 344589999999876643
No 469
>KOG0576|consensus
Probab=97.94 E-value=2e-06 Score=77.99 Aligned_cols=248 Identities=17% Similarity=0.097 Sum_probs=155.8
Q ss_pred hccceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCC-ceeeceeEEeCcEEEEE
Q psy6391 13 LEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPN-IVQLHDTMIENYRLYLI 91 (313)
Q Consensus 13 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~lv 91 (313)
..-+.....+++++.+.+++.+...+.... .+.+... ....-++++|.+++||| .+..++-+..++..++.
T Consensus 241 ~kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~-------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~ 312 (829)
T KOG0576|consen 241 TKWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIP 312 (829)
T ss_pred ccchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc-------hhhHHHHHHHHHccCCCCcccccccCCcccccchh
Confidence 333444555778999999988766443322 3433222 34456789999999999 66677777777889999
Q ss_pred EeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCCCeEEEecCCCccccCCCCc
Q psy6391 92 FEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVR 171 (313)
Q Consensus 92 ~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~ 171 (313)
+++.++.-............+.+.+...+.+.-+..++++|+.--+|+| ||+..++. .+..+|+....+....
T Consensus 313 ~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~~~--~~~~~~~v~~~L~~~~- 385 (829)
T KOG0576|consen 313 MRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSEEE--VKLLDFAVPPQLTRTM- 385 (829)
T ss_pred hhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccccc--cccccccCCcccCccc-
Confidence 9999864101111111112244445556666777888999988777888 77776643 7999999887765443
Q ss_pred ccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCcc
Q psy6391 172 IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK 251 (313)
Q Consensus 172 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (313)
......++..++|||+...+. +...-|.|++|.-..++.-|-+|-..... ... ..... ++-..+...
T Consensus 386 ~~~t~~~~~~~~~pev~~~~~-~~~~p~~~~~~~~~~~~ap~~pPr~~P~~--~~~------~~g~~---p~s~~L~~~- 452 (829)
T KOG0576|consen 386 KPRTAIGTPEPLAPEVIQENT-IDGCPDSGSLAVSAIQMAPGLPPRSSPPA--VLP------MIGNG---PNSPMLTDK- 452 (829)
T ss_pred ccccCCCCCCCCCchhhcccc-cccCCCccCCCcchhhcCCCCCCCCCCcc--ccC------CCCCC---CCccccchh-
Confidence 234457789999999876544 78889999999876677766666554100 000 00000 000000000
Q ss_pred ccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCC
Q psy6391 252 TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 302 (313)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~ 302 (313)
.. +.. .+-.++...|+..-|..|+..-.++-|.+|.+
T Consensus 453 ---~a-----w~~------~~~~~~~~~~~~g~P~~pkv~mgacfsKvfng 489 (829)
T KOG0576|consen 453 ---SA-----WSP------VFHRDFPAPCLNGLPPTPKVHMGACFSKVFNG 489 (829)
T ss_pred ---hh-----cCc------ccccCCcccccCCCCCCCcchhhHHHHHHhcc
Confidence 00 000 01114778899999999999999999988876
No 470
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.87 E-value=0.00042 Score=59.43 Aligned_cols=149 Identities=19% Similarity=0.154 Sum_probs=84.0
Q ss_pred hhhhhcccee-----eeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCC--ceeecee
Q psy6391 9 VKSRLEDYEK-----VEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPN--IVQLHDT 81 (313)
Q Consensus 9 ~~~~~~~y~~-----~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~--i~~~~~~ 81 (313)
+...+++|.+ ++.+..|....+|++... +..+++|+.... ....+..|+.+++.+...+ +.+++..
T Consensus 4 l~~~l~~y~~~~~~~i~~i~~G~~n~~y~v~~~--~~~~vLr~~~~~-----~~~~~~~e~~~l~~L~~~g~~vp~~i~~ 76 (296)
T cd05153 4 LASFLADYDLGELLSFEGISAGIENTNYFVTTD--SGRYVLTLFEKV-----SAEELPFFLALLDHLAERGLPVPRPIAD 76 (296)
T ss_pred HHHHHHHcCCCchhheecccCccccceEEEEeC--CCcEEEEEcCCC-----ChHhccHHHHHHHHHHHCCCCCCccccC
Confidence 3444444543 567877888899998653 457899987641 1245667888777773222 4444432
Q ss_pred ------EEeCcEEEEEEeccccCHH------------HHHhh-------CCCC----CCCCHHHH--H--------HHHH
Q psy6391 82 ------MIENYRLYLIFEFMSMDLK------------KYIDT-------VPKG----QFLAADKV--K--------SITY 122 (313)
Q Consensus 82 ------~~~~~~~~lv~e~~~~~l~------------~~~~~-------~~~~----~~l~~~~~--~--------~~~~ 122 (313)
...++..++++++++|... ..+.. .... ....+... . ....
T Consensus 77 ~~g~~~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 156 (296)
T cd05153 77 RDGEYLSELAGKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRA 156 (296)
T ss_pred CCCcEeeeeCCceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHH
Confidence 2334567899999977210 00100 0000 00000000 0 0111
Q ss_pred HHHHHHHHHHh-------CCceeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 123 QIFQAILFCHK-------RRVLHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 123 ~i~~~l~~Lh~-------~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
.+..++..+.. .+++|||+.|.||+++.++. +.|+||+.+..
T Consensus 157 ~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~-~~iIDfe~a~~ 205 (296)
T cd05153 157 LLADELARQDAFDPSDLPRGVIHADLFRDNVLFDGDEL-SGVIDFYFACT 205 (296)
T ss_pred HHHHHHHHHHhhhhhcCCCcCCccCcCcccEEEeCCce-EEEeehhhhcC
Confidence 12233444443 46999999999999987643 68999998854
No 471
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.85 E-value=0.00017 Score=59.64 Aligned_cols=70 Identities=9% Similarity=0.139 Sum_probs=42.9
Q ss_pred eeeeccccce-EEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCC---CceeeceeEEeC---cEEEEE
Q psy6391 19 VEKIGEGTYG-VVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHP---NIVQLHDTMIEN---YRLYLI 91 (313)
Q Consensus 19 ~~~lg~g~~~-~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~---~~~~lv 91 (313)
++.++.|+.. .||+. +..+++|...... ....+.+|+.+++.+... .+..+++..... ...+++
T Consensus 2 ~~~~~~gG~~n~vy~~-----~~~~VlR~~~~~~----~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l 72 (235)
T cd05155 2 IEPVDSGGTDNATFRL-----GDDMSVRLPSAAG----YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSV 72 (235)
T ss_pred ceeccCCCcccceEEc-----CCceEEEcCCccc----hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEE
Confidence 4567777775 59976 2357788754321 235788899999888532 233344333322 245789
Q ss_pred Eecccc
Q psy6391 92 FEFMSM 97 (313)
Q Consensus 92 ~e~~~~ 97 (313)
|++++|
T Consensus 73 ~~~i~G 78 (235)
T cd05155 73 YRWLEG 78 (235)
T ss_pred EEeecC
Confidence 999877
No 472
>PRK05231 homoserine kinase; Provisional
Probab=97.81 E-value=0.00068 Score=58.80 Aligned_cols=88 Identities=10% Similarity=0.060 Sum_probs=51.7
Q ss_pred CCCchhhhhhcccee-----eeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCC--ce
Q psy6391 4 KATDDVKSRLEDYEK-----VEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPN--IV 76 (313)
Q Consensus 4 ~~~~~~~~~~~~y~~-----~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~--i~ 76 (313)
-+.+++...++.|.+ ++.++.|....+|.+... +..+++|++. . .. ...+..++..++.+...+ +.
T Consensus 7 ls~~~l~~~l~~y~~~~~~~~~~l~~G~~n~~y~v~t~--~g~~vLK~~~-~-~~---~~~l~~~~~~l~~L~~~glpvP 79 (319)
T PRK05231 7 VSDDELAAFLAPYDLGELLSLKGIAEGIENSNFFLTTT--QGEYVLTLFE-R-LT---AEDLPFFLGLMQHLAARGVPVP 79 (319)
T ss_pred CCHHHHHHHHHhcCCchhhccchhccccccceEEEEeC--CCcEEEEEec-c-CC---hHHhHHHHHHHHHHHHCCCCCC
Confidence 345566677777755 355667777889998754 3368999875 1 11 233444555555552111 33
Q ss_pred eece------eEEeCcEEEEEEeccccC
Q psy6391 77 QLHD------TMIENYRLYLIFEFMSMD 98 (313)
Q Consensus 77 ~~~~------~~~~~~~~~lv~e~~~~~ 98 (313)
+++. +....+..++++++++|.
T Consensus 80 ~~i~~~~G~~~~~~~g~~~~l~~~l~G~ 107 (319)
T PRK05231 80 APVARRDGAALGELAGKPAAIVTFLEGK 107 (319)
T ss_pred cceeCCCCCEeeeeCCEEEEEEEecCCC
Confidence 3332 123356678999999873
No 473
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.81 E-value=0.00077 Score=59.74 Aligned_cols=77 Identities=17% Similarity=0.113 Sum_probs=52.3
Q ss_pred eeeeccccceEEEEEEeCcCCcEEEEEEecccCC-----CCCCchhHHHHHHHHhhcC---CCCceeeceeEEeCcEEEE
Q psy6391 19 VEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND-----DEGIPATAIREISVLKELN---HPNIVQLHDTMIENYRLYL 90 (313)
Q Consensus 19 ~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-----~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~l 90 (313)
.+.||.|....||++....+++.+++|.-..... ..........|...|+.+. -.++.+++.+ +.+..++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l 108 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT 108 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence 4689999999999999874435899997542111 1122356677888888873 2345555555 4466889
Q ss_pred EEecccc
Q psy6391 91 IFEFMSM 97 (313)
Q Consensus 91 v~e~~~~ 97 (313)
|||++++
T Consensus 109 VME~L~~ 115 (401)
T PRK09550 109 VMEDLSD 115 (401)
T ss_pred EEecCCC
Confidence 9999875
No 474
>KOG2268|consensus
Probab=97.81 E-value=2.3e-05 Score=66.06 Aligned_cols=136 Identities=15% Similarity=0.262 Sum_probs=91.2
Q ss_pred ceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCC----------------CCCC----chhHHHHHHHHhhcCCCC-
Q psy6391 16 YEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND----------------DEGI----PATAIREISVLKELNHPN- 74 (313)
Q Consensus 16 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~----------------~~~~----~~~~~~e~~~l~~l~~~~- 74 (313)
+.+...||-|..+.+|.+-+. .|.+.++|.=+.... ...+ .-...+|...++.|....
T Consensus 94 ~svGnqIGVGKESDIY~v~d~-~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf 172 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVADE-EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF 172 (465)
T ss_pred hhhccccccccccceEEEecC-CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence 567889999999999999876 677888884322110 0001 112345777777773221
Q ss_pred -ceeeceeEEeCcEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCEEEecCC
Q psy6391 75 -IVQLHDTMIENYRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRVLHRDLKPQNLLIDAKS 152 (313)
Q Consensus 75 -i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i~H~di~~~Nil~~~~~ 152 (313)
+.+.+ +.+.+++|||.+.| .|...-.. ..+..+...+...+--|..+|++|||.+--||+++.++
T Consensus 173 pVPkpi----D~~RH~Vvmelv~g~Pl~~v~~v---------~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~ 239 (465)
T KOG2268|consen 173 PVPKPI----DHNRHCVVMELVDGYPLRQVRHV---------EDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDD 239 (465)
T ss_pred CCCCcc----cccceeeHHHhhcccceeeeeec---------CChHHHHHHHHHHHHHHHHcCceecccchheeEEecCC
Confidence 22222 44678899999988 43322211 11334556677777788999999999999999999877
Q ss_pred CeEEEecCCCcccc
Q psy6391 153 NIVKVADFGLARAF 166 (313)
Q Consensus 153 ~~~~l~df~~~~~~ 166 (313)
. ++++||-.+...
T Consensus 240 ~-i~vIDFPQmvS~ 252 (465)
T KOG2268|consen 240 K-IVVIDFPQMVST 252 (465)
T ss_pred C-EEEeechHhhcc
Confidence 6 899999877554
No 475
>PRK10593 hypothetical protein; Provisional
Probab=97.74 E-value=0.00093 Score=57.27 Aligned_cols=75 Identities=19% Similarity=0.127 Sum_probs=54.5
Q ss_pred eeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCC---CCceeeceeEEe---CcEEEE
Q psy6391 17 EKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNH---PNIVQLHDTMIE---NYRLYL 90 (313)
Q Consensus 17 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~---~~~~~l 90 (313)
.-.+.||.|..+.||..... +..+++|..+.. .....+..|+..++.+.. -.+.++++.+.+ .+..++
T Consensus 17 ~~~~~i~~G~~~~vy~~~~~--~~~~~~k~~~~~----~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~L 90 (297)
T PRK10593 17 SRVECISEQPYAALWALYDS--QGNPMPLMARSF----STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVL 90 (297)
T ss_pred heeeecCCccceeEEEEEcC--CCCEEEEEeccc----ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEE
Confidence 44578999999999999654 235777875321 112578899999998842 467788887764 367899
Q ss_pred EEecccc
Q psy6391 91 IFEFMSM 97 (313)
Q Consensus 91 v~e~~~~ 97 (313)
|||+++|
T Consensus 91 VmE~i~G 97 (297)
T PRK10593 91 LLERLRG 97 (297)
T ss_pred EEeccCC
Confidence 9999986
No 476
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.74 E-value=0.00035 Score=58.57 Aligned_cols=136 Identities=15% Similarity=0.214 Sum_probs=76.2
Q ss_pred eeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCc-eeeceeEEeCcEEEEEEeccccC-
Q psy6391 21 KIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNI-VQLHDTMIENYRLYLIFEFMSMD- 98 (313)
Q Consensus 21 ~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~~~~~- 98 (313)
.+..|-.+.+|++.. +++.+++|......... .-...+|..+++.+....+ .+++... . -++|++|++|.
T Consensus 3 ~~~~G~tn~~y~~~~--~~~~~vlR~~~~~~~~~--~~~r~~E~~~l~~l~~~g~~P~~i~~~--~--~~~v~e~i~G~~ 74 (256)
T TIGR02721 3 TLSGGLTNRSWRIEH--PGISFVWRPQSPVCKAL--GVDRQREYQILQALSALGLAPKPILVN--E--HWLLVEWLEGEV 74 (256)
T ss_pred cCCCcCcCCeEEEEe--CCccEEEeeCCcccccc--cCcHHHHHHHHHHHHhcCCCCceEEEe--C--CEEEEEeccCcc
Confidence 455678889998873 46788999765432111 1235788899988854333 3333332 2 36899999872
Q ss_pred HH--------------HHHhhC---C-CCCCCCH-HHHHHHHHHH---------HHHHHHHHh--------CCceeccCC
Q psy6391 99 LK--------------KYIDTV---P-KGQFLAA-DKVKSITYQI---------FQAILFCHK--------RRVLHRDLK 142 (313)
Q Consensus 99 l~--------------~~~~~~---~-~~~~l~~-~~~~~~~~~i---------~~~l~~Lh~--------~~i~H~di~ 142 (313)
+. ..+..+ . ...++.. ..+.....++ ...+..+.. ..++|+|+.
T Consensus 75 ~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~ 154 (256)
T TIGR02721 75 ITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVH 154 (256)
T ss_pred cccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCC
Confidence 11 111111 1 1111221 1111211111 111222221 248999999
Q ss_pred CCCEEEecCCCeEEEecCCCcccc
Q psy6391 143 PQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 143 ~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
|.||+++.++ +.++||+.+...
T Consensus 155 ~~Nil~~~~~--~~lIDwE~a~~g 176 (256)
T TIGR02721 155 AYNLVVTPQG--LKLIDWEYASDG 176 (256)
T ss_pred cCcEEEeCCC--CEEEeccccCcC
Confidence 9999998765 789999998653
No 477
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.74 E-value=0.00057 Score=58.97 Aligned_cols=152 Identities=17% Similarity=0.178 Sum_probs=84.9
Q ss_pred chhhhhhcccee-----eeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCC--ceeec
Q psy6391 7 DDVKSRLEDYEK-----VEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPN--IVQLH 79 (313)
Q Consensus 7 ~~~~~~~~~y~~-----~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~--i~~~~ 79 (313)
+++...+++|.+ ++.++.|....+|++... +..+++|+...... ...+..|+.++..+...+ +.+++
T Consensus 10 ~~l~~~l~~y~~~~~~~i~~~~~G~~n~~y~v~t~--~~~~vLK~~~~~~~----~~~i~~e~~~l~~L~~~g~pvp~~i 83 (307)
T TIGR00938 10 EEMSSFLDGYDLGELLSLKGIAEGVENSNYLLTTD--VGRYILTLYEKRVK----AEELPFFLALTTHLAARGLPVPKPV 83 (307)
T ss_pred HHHHHHHHhcCCCCceeccccCCccccceEEEEeC--CCcEEEEEecCCCC----HHHHHHHHHHHHHHHHCCCCCCccc
Confidence 556666666654 456777777899988643 34688898754211 244556777777763222 33443
Q ss_pred eeE------EeCcEEEEEEeccccC-H-----H------HHHhh---CCCCC--------CCC-HHHHH-----------
Q psy6391 80 DTM------IENYRLYLIFEFMSMD-L-----K------KYIDT---VPKGQ--------FLA-ADKVK----------- 118 (313)
Q Consensus 80 ~~~------~~~~~~~lv~e~~~~~-l-----~------~~~~~---~~~~~--------~l~-~~~~~----------- 118 (313)
... ...+..+++++|++|. + . ..+.. ...+. ..+ +....
T Consensus 84 ~t~~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~ 163 (307)
T TIGR00938 84 KSRDGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLE 163 (307)
T ss_pred cCCCCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccC
Confidence 321 2345678999998762 1 0 11100 00000 000 00000
Q ss_pred -HHHHHHHHHHHHHHh-------CCceeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 119 -SITYQIFQAILFCHK-------RRVLHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 119 -~~~~~i~~~l~~Lh~-------~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
.....+...++++.. .+++|||+.+.||+++.++ ...|+||+.+..
T Consensus 164 ~~~~~~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~-~~~vIDfd~~~~ 217 (307)
T TIGR00938 164 AHMGAELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDS-VKGVIDFYFACT 217 (307)
T ss_pred HHHHHHHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCc-eEEEeecccccC
Confidence 001112234444432 5799999999999998875 368999998854
No 478
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.70 E-value=0.00016 Score=57.44 Aligned_cols=101 Identities=13% Similarity=0.111 Sum_probs=75.8
Q ss_pred HHHHHHHhhcCC-CCceeeceeEEeCcEEEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CC
Q psy6391 61 IREISVLKELNH-PNIVQLHDTMIENYRLYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHK---RR 135 (313)
Q Consensus 61 ~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~---~~ 135 (313)
.+|.-+++.+.+ +++++++|+|- ..++.|+.+. ++.........-...++.....++.+++..+.+|+. ..
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 358888999954 69999999983 2568888874 443211111111226899999999999999999997 34
Q ss_pred ceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 136 VLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 136 i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
+.-.|++++|+-++.++. ++++|.+.+...
T Consensus 83 ~~lcDv~~~nfgv~~~~~-lk~iDld~v~~~ 112 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGR-LKLIDLDDVFVE 112 (188)
T ss_pred EEEeecchHHeEEeCCCc-EEEEechhcchh
Confidence 777899999999998877 999999887654
No 479
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.38 E-value=0.0028 Score=54.52 Aligned_cols=72 Identities=24% Similarity=0.210 Sum_probs=45.9
Q ss_pred eeeeccccceEEEEEEeCc------CCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCc-eeeceeEEeCcEEEEE
Q psy6391 19 VEKIGEGTYGVVYKAKNKV------TGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNI-VQLHDTMIENYRLYLI 91 (313)
Q Consensus 19 ~~~lg~g~~~~v~~~~~~~------~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv 91 (313)
++.|..|-...+|++.... .++.+++|+....... .....+|+.+++.+...++ .++++++.. .+|
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~---~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v 75 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVEL---LIDRERELVVFARLSERNLGPKLYGIFPN----GRI 75 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcc---eechHHHHHHHHHHHhCCCCCceEEEeCC----Cch
Confidence 4567777778999997643 2578999997543321 2456788888888853333 344444432 357
Q ss_pred Eecccc
Q psy6391 92 FEFMSM 97 (313)
Q Consensus 92 ~e~~~~ 97 (313)
++|++|
T Consensus 76 ~e~i~G 81 (302)
T cd05156 76 EEFIPS 81 (302)
T ss_pred hheeCC
Confidence 888766
No 480
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=97.29 E-value=0.0044 Score=53.97 Aligned_cols=143 Identities=19% Similarity=0.201 Sum_probs=79.0
Q ss_pred eeeeeeccccceEEEEEEeCcC---CcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCce-eeceeEEeCcEEEEEE
Q psy6391 17 EKVEKIGEGTYGVVYKAKNKVT---GALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIV-QLHDTMIENYRLYLIF 92 (313)
Q Consensus 17 ~~~~~lg~g~~~~v~~~~~~~~---~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~lv~ 92 (313)
..++.|..|-...+|++..... +..|++|+...... ..-...+|..+++.+...++. ++++++. ++ +|.
T Consensus 17 i~i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~---~~IdR~~E~~il~~l~~~gl~P~~l~~~~-~G---~i~ 89 (330)
T PLN02421 17 FSVERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD---YVIDRERELQAIKYLSAAGFGAKLLGVFG-NG---MIQ 89 (330)
T ss_pred eEEEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcC---eEechHHHHHHHHHHHhcCCCCceeEEeC-Cc---Eee
Confidence 3455666677889999975432 33789998754321 123345788888888654443 4555543 22 477
Q ss_pred eccccC-H--------------HHHHhhCCC----C--CCCCHHHHHHHHHHH----------------------HHHHH
Q psy6391 93 EFMSMD-L--------------KKYIDTVPK----G--QFLAADKVKSITYQI----------------------FQAIL 129 (313)
Q Consensus 93 e~~~~~-l--------------~~~~~~~~~----~--~~l~~~~~~~~~~~i----------------------~~~l~ 129 (313)
+|+.|. + ...+..+.. . .+.....+..+..++ ..-+.
T Consensus 90 ~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 169 (330)
T PLN02421 90 SFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIV 169 (330)
T ss_pred hhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHH
Confidence 887652 1 111111111 0 011122232222221 11111
Q ss_pred HHH----hC----CceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 130 FCH----KR----RVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 130 ~Lh----~~----~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
.+. .. -++|+|+.+.||+++.+++.++++||+++..-
T Consensus 170 ~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~n 214 (330)
T PLN02421 170 ELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYS 214 (330)
T ss_pred HHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCC
Confidence 111 11 27899999999999865445999999999654
No 481
>PLN02236 choline kinase
Probab=97.27 E-value=0.0064 Score=53.29 Aligned_cols=143 Identities=17% Similarity=0.165 Sum_probs=80.3
Q ss_pred eeeeeeccccceEEEEEEeCc----CCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCce-eeceeEEeCcEEEEE
Q psy6391 17 EKVEKIGEGTYGVVYKAKNKV----TGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIV-QLHDTMIENYRLYLI 91 (313)
Q Consensus 17 ~~~~~lg~g~~~~v~~~~~~~----~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~lv 91 (313)
.-++.|..|-...+|++.... .++.|++|+..... .. .-...+|..+++.+...++. ++++.+..+ .|
T Consensus 39 ~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t--~~-~idR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v 111 (344)
T PLN02236 39 LQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV--EL-FFDRDDEIRTFECMSRHGQGPRLLGRFPNG----RV 111 (344)
T ss_pred EEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC--Ce-eechHHHHHHHHHHHHcCCCCceEEEECCc----eE
Confidence 345566668888999987432 24689999876543 11 12336788888888544443 455555332 46
Q ss_pred Eecccc-CHH--------------HHHhhC---C-CCC--CCCHHHHHHHHHHH-----------------HHHHHHHH-
Q psy6391 92 FEFMSM-DLK--------------KYIDTV---P-KGQ--FLAADKVKSITYQI-----------------FQAILFCH- 132 (313)
Q Consensus 92 ~e~~~~-~l~--------------~~~~~~---~-~~~--~l~~~~~~~~~~~i-----------------~~~l~~Lh- 132 (313)
.+|+++ ++. ..+..+ . ... ......+..+..++ ...+..|.
T Consensus 112 ~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~ 191 (344)
T PLN02236 112 EEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEK 191 (344)
T ss_pred EEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHH
Confidence 788765 221 011111 1 011 11223333332221 11111221
Q ss_pred -------hCCceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 133 -------KRRVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 133 -------~~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
...++|+|+++.||+++.++..+.++||+++...
T Consensus 192 ~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~ 232 (344)
T PLN02236 192 ELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASYN 232 (344)
T ss_pred HhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcccc
Confidence 1258999999999999865445999999998643
No 482
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.24 E-value=0.0075 Score=53.50 Aligned_cols=76 Identities=14% Similarity=0.160 Sum_probs=50.9
Q ss_pred eeeeeccccceEEEEEEeCcCCcEEEEEEecccCC--C---CCCchhHHHHHHHHhhcC---CCCceeeceeEEeCcEEE
Q psy6391 18 KVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMEND--D---EGIPATAIREISVLKELN---HPNIVQLHDTMIENYRLY 89 (313)
Q Consensus 18 ~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~--~---~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~ 89 (313)
..+.||.|....||++... +..++||.-..... . .-...+...|+..|+.+. -.++.+++.++. +..+
T Consensus 36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~v 111 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMAL 111 (418)
T ss_pred eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCE
Confidence 5678899999999999874 45689997652211 1 112345556677777663 246677777766 4467
Q ss_pred EEEecccc
Q psy6391 90 LIFEFMSM 97 (313)
Q Consensus 90 lv~e~~~~ 97 (313)
++||++++
T Consensus 112 lvME~L~~ 119 (418)
T PLN02756 112 IGMRYLEP 119 (418)
T ss_pred EEEeecCC
Confidence 78999966
No 483
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.20 E-value=0.0092 Score=51.21 Aligned_cols=148 Identities=18% Similarity=0.252 Sum_probs=84.9
Q ss_pred ceeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCC--CCceeeceeEEeCc--EEEEE
Q psy6391 16 YEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNH--PNIVQLHDTMIENY--RLYLI 91 (313)
Q Consensus 16 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~--~~~lv 91 (313)
..+++....|-...+|..... ++.++++ ...............+|..+++.+.. --+...++++.++. ..+.|
T Consensus 27 ~~~v~~~~~G~sn~t~~~~~~--~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v 103 (321)
T COG3173 27 LLIVEEISGGWSNDTFRLGDT--GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYV 103 (321)
T ss_pred CceeeeccCCcccceEEEecC--CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEE
Confidence 345555545555566666554 7788988 33222333334677788888888843 33445556666555 67999
Q ss_pred EeccccC-------------------HHHHHhhC---CC------C--CCCCHHHHHHHHHHH--------------HHH
Q psy6391 92 FEFMSMD-------------------LKKYIDTV---PK------G--QFLAADKVKSITYQI--------------FQA 127 (313)
Q Consensus 92 ~e~~~~~-------------------l~~~~~~~---~~------~--~~l~~~~~~~~~~~i--------------~~~ 127 (313)
|+|+.|. +.+.+..+ +. . ......++..+..+. ...
T Consensus 104 ~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~ 183 (321)
T COG3173 104 MEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRL 183 (321)
T ss_pred EEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHH
Confidence 9999761 11111110 00 0 001111222222222 112
Q ss_pred HHHHHhC--------CceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 128 ILFCHKR--------RVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 128 l~~Lh~~--------~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
..+|+.. .++|||+.+.|++++.++. +-+.||+.+..-+
T Consensus 184 ~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~-~gVlDwe~~~lGD 230 (321)
T COG3173 184 IKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRP-TGVLDWELATLGD 230 (321)
T ss_pred HHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCe-eEEEeccccccCC
Confidence 3344432 3799999999999999887 8999999997654
No 484
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.15 E-value=0.0078 Score=52.46 Aligned_cols=76 Identities=16% Similarity=0.122 Sum_probs=48.2
Q ss_pred eeccccceEEEEEEeCcCCcEEEEEEeccc-----CCCCCCchhHHHHHHHHhhcC--CCCceeeceeEEeCcEEEEEEe
Q psy6391 21 KIGEGTYGVVYKAKNKVTGALVAIKKIRME-----NDDEGIPATAIREISVLKELN--HPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 21 ~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~-----~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~lv~e 93 (313)
.+|.|....||++....+++.++||.-... ....-...+..-|...|+... .|..++-+ ++.++....+|||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~v-y~~D~e~~~~vME 80 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRI-FHFDTEMAVTVME 80 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeE-EEEccccceehHh
Confidence 578899999999998644468999964311 122333455667888887763 44333322 3345556779999
Q ss_pred cccc
Q psy6391 94 FMSM 97 (313)
Q Consensus 94 ~~~~ 97 (313)
+++.
T Consensus 81 dL~~ 84 (370)
T TIGR01767 81 DLSH 84 (370)
T ss_pred hCcc
Confidence 8854
No 485
>PRK12396 5-methylribose kinase; Reviewed
Probab=97.15 E-value=0.0038 Score=55.07 Aligned_cols=78 Identities=17% Similarity=0.208 Sum_probs=50.4
Q ss_pred eeeeccccceEEEEEEeCcCCcEEEEEEec----ccCCCCCCchhHHHHHHHHhhcC--CCCceeeceeEEeCcEEEEEE
Q psy6391 19 VEKIGEGTYGVVYKAKNKVTGALVAIKKIR----MENDDEGIPATAIREISVLKELN--HPNIVQLHDTMIENYRLYLIF 92 (313)
Q Consensus 19 ~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~----~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~lv~ 92 (313)
.+.||.|....||++.+...++.++||.-. ......-...+..-|...|+... .|..++-+. +.++....+||
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy-~~D~e~~~~vM 112 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVY-LFDSVMNCCVM 112 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEE-EECcHHhhHHH
Confidence 678999999999999985445679999532 22222333456667888888773 454433322 23555677888
Q ss_pred ecccc
Q psy6391 93 EFMSM 97 (313)
Q Consensus 93 e~~~~ 97 (313)
|+++.
T Consensus 113 EdL~~ 117 (409)
T PRK12396 113 EDLSD 117 (409)
T ss_pred HhCcc
Confidence 88753
No 486
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.12 E-value=0.0047 Score=52.33 Aligned_cols=32 Identities=28% Similarity=0.506 Sum_probs=26.6
Q ss_pred CceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 135 RVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 135 ~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
.++|||+++.||+++.++...-|+||+.+...
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG 217 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKVG 217 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence 48999999999999875565679999988653
No 487
>KOG1093|consensus
Probab=97.09 E-value=0.0019 Score=58.08 Aligned_cols=173 Identities=24% Similarity=0.272 Sum_probs=108.0
Q ss_pred hhHHHHHHHHhhcCCCCceeeceeEEe-CcEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy6391 58 ATAIREISVLKELNHPNIVQLHDTMIE-NYRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRRV 136 (313)
Q Consensus 58 ~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~i 136 (313)
.+++-..++++.+.|++.-.++.+-.. .....+|+|+++.++.+.+.... +.. . +++
T Consensus 27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~~Sled~~~~~~----l~~---~----s~~----------- 84 (725)
T KOG1093|consen 27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYTMSLEDILKTGN----LKD---E----SLL----------- 84 (725)
T ss_pred HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhccchHHHHHhcc----cch---h----hhc-----------
Confidence 466778889999999999998888763 35689999999999998877532 111 0 111
Q ss_pred eeccCCCCCEEEecCCCeEEEecCCCccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCC
Q psy6391 137 LHRDLKPQNLLIDAKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPL 216 (313)
Q Consensus 137 ~H~di~~~Nil~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~p 216 (313)
+|+ +.+.|+ +..+| .++.. | |- +..+++|||++|.++.++.-|...
T Consensus 85 ~~~-~~~~~~--------~~~td-~~~t~----------------~--~~------~~~pKsdVwsl~~i~~el~L~~~l 130 (725)
T KOG1093|consen 85 AHG-VLHLNI--------IYITD-HFLTK----------------Y--PS------PIGPKSDVWSLGFIILELYLGISL 130 (725)
T ss_pred ccc-cceehh--------hhccc-ccccc----------------C--CC------CCCcchhhhhHHHHHHHHHHhhHH
Confidence 222 112222 33333 11100 0 10 122599999999999999998877
Q ss_pred CCCCChHHHHHHHHHhcCCCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhc
Q psy6391 217 FQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 296 (313)
Q Consensus 217 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 296 (313)
+.....-+....+.+....+... ..-.+.....-.++.-...+.++|+-..|..||...++..
T Consensus 131 ~~~~~~s~~l~~i~k~~~~d~~~-----------------~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k 193 (725)
T KOG1093|consen 131 EAELTESEYLEILLKYYTDDQEL-----------------LSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSK 193 (725)
T ss_pred HHHHHHHHHHHHHHHhccCchhH-----------------HHHHHHHHHHHhhhHhHHHHhccCCccccccccchhHHhc
Confidence 76655545444444432211110 0001111111245677889999999999999999999999
Q ss_pred CCCCCCC
Q psy6391 297 HKYFADK 303 (313)
Q Consensus 297 h~~~~~~ 303 (313)
++-|++.
T Consensus 194 ~~i~~ev 200 (725)
T KOG1093|consen 194 RCSFTEV 200 (725)
T ss_pred CccHHHH
Confidence 9888753
No 488
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.77 E-value=0.067 Score=46.11 Aligned_cols=30 Identities=30% Similarity=0.476 Sum_probs=25.4
Q ss_pred CCceeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 134 RRVLHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 134 ~~i~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
.+++|||+.+.||+++. +. +.|+||+.+..
T Consensus 187 ~~liHgD~~~~Nil~~~-~~-i~lIDfd~~~~ 216 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NE-VYVIDFDYCTI 216 (313)
T ss_pred CceEcCCCCcccEEEeC-Cc-EEEEECccccc
Confidence 47899999999999987 45 79999997743
No 489
>KOG1826|consensus
Probab=96.73 E-value=0.00018 Score=72.00 Aligned_cols=263 Identities=14% Similarity=0.009 Sum_probs=147.3
Q ss_pred hhhhhhccceeeeeeccccceEEEEEEeCcCCcEEEEEEecc---cCCCCCCchhHHHHHHHHhhcCCCCceeeceeEEe
Q psy6391 8 DVKSRLEDYEKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRM---ENDDEGIPATAIREISVLKELNHPNIVQLHDTMIE 84 (313)
Q Consensus 8 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~---~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 84 (313)
++.+++..+++.--++-|..+.--..+.+.++ +.+++.+. +...+...+-...|..-++...|+++.....-...
T Consensus 1223 kM~s~~e~~EV~l~i~~~~~~R~k~Lr~kid~--Fk~~I~ke~d~e~LsePlkemll~e~de~~~~~h~~~~~~p~rI~p 1300 (2724)
T KOG1826|consen 1223 KMFSAMEHSEVNLGISNHFHFRNKWLRSKIDW--FKFSIYKEYDFENLSEPLKEMLLSERDELREAKHYLTEVDPLRIPP 1300 (2724)
T ss_pred HHHHHhhhhheeeecccceeeccchHhhhhce--eEEEeehhhhHHHHhhHHHHhhhhhhhhhhhhhceeeecccccCCC
Confidence 45677777777766665554432222222222 34444432 11222111222233333444467666655544432
Q ss_pred C--cEEEEEEeccc-cCHHHHHhhCCC-CCCCCHHHHHHHHHHH-HHHHHHHHhC-C----ceeccCCCCCEEEecCCCe
Q psy6391 85 N--YRLYLIFEFMS-MDLKKYIDTVPK-GQFLAADKVKSITYQI-FQAILFCHKR-R----VLHRDLKPQNLLIDAKSNI 154 (313)
Q Consensus 85 ~--~~~~lv~e~~~-~~l~~~~~~~~~-~~~l~~~~~~~~~~~i-~~~l~~Lh~~-~----i~H~di~~~Nil~~~~~~~ 154 (313)
. ..-+..++++. |.+.+.+-+.-. ...+... .....+++ +......|+. + .+|.++++-|.++..+-+
T Consensus 1301 s~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~-~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~- 1378 (2724)
T KOG1826|consen 1301 SESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRS-PVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYN- 1378 (2724)
T ss_pred CCChHHHHHHHHHHHhHHHHHHHhccccCCcchhc-hHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCc-
Confidence 2 34567777776 466666554322 2223333 33333444 5666665543 2 689999999999999877
Q ss_pred EEEecCCCccccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcC
Q psy6391 155 VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLT 234 (313)
Q Consensus 155 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~ 234 (313)
++++++|+.+.............+++.|+.|+... ....+.++|+|..|+.+|....|..+|..- .+...+.
T Consensus 1379 v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N-~ik~t~rsdilr~s~~ly~rs~~n~~fi~f-----lq~~Lkg-- 1450 (2724)
T KOG1826|consen 1379 VKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKN-EIKFTKRSDILRRSLSLYLRSDGNAYFIFF-----LQPALKG-- 1450 (2724)
T ss_pred ccccccccccccCchHhhhhhhhCCHHHHHHHHHH-HHhhhhHHHHHHHHHHHHHHhcccHHHHHH-----HHHHHcC--
Confidence 99999999985444444444456677788888653 334777899999999999998777665421 1111111
Q ss_pred CCCCCCCCCCCCCCCccccCCCCchhhhhhhccCCCHHHHHHHHHHhccCCCCCCCHHHHhcCCCCCCC
Q psy6391 235 TPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 303 (313)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~h~~~~~~ 303 (313)
.......-... .-.|+++-.....+|-..-.+||.-...++-+.|..+
T Consensus 1451 iidn~tf~sIe---------------------~l~pgdaNve~~~~Ll~K~~~rp~q~isls~d~~a~~ 1498 (2724)
T KOG1826|consen 1451 IIDNHTFFSIE---------------------KLKPGDANVEALHRLLWKYMERPGQYISLSRDHFAVG 1498 (2724)
T ss_pred ccccccccccc---------------------ccCCCcccHHHHHHHHHHhhhcchhhhhccccccccc
Confidence 00000000000 0124455555566666666788888888888777653
No 490
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.71 E-value=0.031 Score=48.27 Aligned_cols=30 Identities=20% Similarity=0.232 Sum_probs=26.8
Q ss_pred CceeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 135 RVLHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 135 ~i~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
+++|||+.+.|++++.++. +.++||..+..
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~-~~iIDfd~~~~ 226 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRG-GYFINFEKASF 226 (309)
T ss_pred eeeCCCCcHHhEEEcCCCC-EEEEEhhhccc
Confidence 6999999999999988766 89999998864
No 491
>PRK11768 serine/threonine protein kinase; Provisional
Probab=96.64 E-value=0.11 Score=45.23 Aligned_cols=88 Identities=18% Similarity=0.093 Sum_probs=51.2
Q ss_pred CCchhhhhhccceee-----eeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCC--cee
Q psy6391 5 ATDDVKSRLEDYEKV-----EKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNHPN--IVQ 77 (313)
Q Consensus 5 ~~~~~~~~~~~y~~~-----~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~--i~~ 77 (313)
+.+.+...++.+-+. ..| .+....||++... ++..+++|+.+.... ....+..|+..+..+.... ++.
T Consensus 12 ~p~~~~~a~~~~g~~~~~~~~~l-~s~eN~vy~v~~~-~~~~~vlKv~r~~~~---~~~~i~~E~~~l~~L~~~gipv~~ 86 (325)
T PRK11768 12 TPDLILDALESLGLRVDGRLLAL-NSYENRVYQFGDE-DGRRVVAKFYRPERW---SDAQILEEHAFALELAEAEIPVVA 86 (325)
T ss_pred ChHHHHHHHHHcCCCCccceEee-ccccceEEEEecC-CCCEEEEEEcCcccC---CHHHHHHHHHHHHHHHHCCCCCCC
Confidence 455566666666332 222 2455678988754 456799998863321 2356777888877763111 222
Q ss_pred ec---e--eEEeCcEEEEEEecccc
Q psy6391 78 LH---D--TMIENYRLYLIFEFMSM 97 (313)
Q Consensus 78 ~~---~--~~~~~~~~~lv~e~~~~ 97 (313)
.. | ....++..+.++++++|
T Consensus 87 p~~~~G~~~~~~~g~~~~l~~~~~G 111 (325)
T PRK11768 87 PLAFNGQTLHEHQGFRFALFPRRGG 111 (325)
T ss_pred CccCCCCEEEEECCEEEEEEeeeCC
Confidence 22 2 22335677889998876
No 492
>PTZ00384 choline kinase; Provisional
Probab=96.64 E-value=0.051 Score=48.29 Aligned_cols=74 Identities=19% Similarity=0.193 Sum_probs=44.0
Q ss_pred eeeeeeccccceEEEEEEeCcC-CcE-----EEEEEecccCCCCCCchhHHHHHHHHhhcCCCCce-eeceeEEeCcEEE
Q psy6391 17 EKVEKIGEGTYGVVYKAKNKVT-GAL-----VAIKKIRMENDDEGIPATAIREISVLKELNHPNIV-QLHDTMIENYRLY 89 (313)
Q Consensus 17 ~~~~~lg~g~~~~v~~~~~~~~-~~~-----~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~ 89 (313)
..++.|..|-...+|++..... +.. |++++.. .....--...+|+.+++.+...++. ++++.+.. +
T Consensus 53 i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g---~~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~----g 125 (383)
T PTZ00384 53 IEIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSS---TYNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFGD----F 125 (383)
T ss_pred EEEEEeCCcccceEEEEEecCCCCCccccceEEEEecc---CCCceEeccHHHHHHHHHHHhCCCCCeEEEecCC----E
Confidence 3556676688899999975432 122 4444321 1111123345789999999655544 45555543 4
Q ss_pred EEEecccc
Q psy6391 90 LIFEFMSM 97 (313)
Q Consensus 90 lv~e~~~~ 97 (313)
++.||++|
T Consensus 126 ~l~efIeG 133 (383)
T PTZ00384 126 TIQEWVEG 133 (383)
T ss_pred EEEEEecc
Confidence 88898876
No 493
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.63 E-value=0.026 Score=48.04 Aligned_cols=74 Identities=19% Similarity=0.217 Sum_probs=48.2
Q ss_pred eeeeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc---CCCCceeeceeEEeCcEEEEEEe
Q psy6391 17 EKVEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL---NHPNIVQLHDTMIENYRLYLIFE 93 (313)
Q Consensus 17 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l---~~~~i~~~~~~~~~~~~~~lv~e 93 (313)
+-.+.++.|....+|+.. .+++.+.+|+-.... ...+..|+.-|+.+ ..-.+.+++++....+..++|+|
T Consensus 20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~~-----~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle 92 (288)
T PF03881_consen 20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNSESG-----RDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLE 92 (288)
T ss_dssp -EEEEE--SSSSEEEEEE--TTS-EEEEEEEEGGG-----CCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE
T ss_pred eeeEecCCCChhheEEEE--CCCccEEEEecChhh-----HHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEE
Confidence 455778889999999987 467889999876221 25677788877777 35567788888887777799999
Q ss_pred cccc
Q psy6391 94 FMSM 97 (313)
Q Consensus 94 ~~~~ 97 (313)
|++.
T Consensus 93 ~l~~ 96 (288)
T PF03881_consen 93 FLEM 96 (288)
T ss_dssp ----
T ss_pred eecC
Confidence 9853
No 494
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.26 E-value=0.026 Score=48.98 Aligned_cols=103 Identities=21% Similarity=0.264 Sum_probs=70.8
Q ss_pred cEEEEEEeccccCHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCCEEEecCCCeEEEecCCCcc
Q psy6391 86 YRLYLIFEFMSMDLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKR-RVLHRDLKPQNLLIDAKSNIVKVADFGLAR 164 (313)
Q Consensus 86 ~~~~lv~e~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~-~i~H~di~~~Nil~~~~~~~~~l~df~~~~ 164 (313)
...|++|++.++++... . ....+++..++++.+..+.-+..+ ..-|+++...||+++ +|+ +.|+||.++.
T Consensus 299 ~y~yl~~kdhgt~is~i-k------~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~Gn-vtLIDfklsR 369 (488)
T COG5072 299 LYLYLHFKDHGTPISII-K------ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGN-VTLIDFKLSR 369 (488)
T ss_pred eEEEEEEecCCceeeee-e------cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCc-eEEEEeeeee
Confidence 46678888877654221 1 145778889999999888888765 688999999999999 778 9999999997
Q ss_pred ccCCCCcccccccccccccchhhhcCCCCCCcchhHhHHH
Q psy6391 165 AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIG 204 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG 204 (313)
..-++... .....-.|-.|.+ ..+...+||.+=
T Consensus 370 l~~~q~~i-----sy~rldhp~lF~G--~dd~QFeIYrlM 402 (488)
T COG5072 370 LSYSQGII-----SYNRLDHPDLFNG--VDDYQFEIYRLM 402 (488)
T ss_pred cccCCcee-----eccccCchhhhcC--ccceeeeHHHHH
Confidence 54332221 1222334444543 247778888743
No 495
>PTZ00296 choline kinase; Provisional
Probab=95.48 E-value=0.25 Score=44.88 Aligned_cols=73 Identities=22% Similarity=0.193 Sum_probs=45.1
Q ss_pred eeeeeccccceEEEEEEeCc--------CCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCCCCce-eeceeEEeCcEE
Q psy6391 18 KVEKIGEGTYGVVYKAKNKV--------TGALVAIKKIRMENDDEGIPATAIREISVLKELNHPNIV-QLHDTMIENYRL 88 (313)
Q Consensus 18 ~~~~lg~g~~~~v~~~~~~~--------~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~ 88 (313)
-++.|..|-.-.+|++.... .++.|++|+.-..... .-...+|..+++.+...++. ++++.+. -
T Consensus 109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~---lIdR~~E~~v~~~ls~~gi~P~l~~~f~----g 181 (442)
T PTZ00296 109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDE---LYNPISEFEVYKTMSKYRIAPQLLNTFS----G 181 (442)
T ss_pred EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccc---eeCHHHHHHHHHHHHHCCCCCceEEEeC----C
Confidence 56777778888999997542 1467899987543321 12445688888887544444 3444442 2
Q ss_pred EEEEecccc
Q psy6391 89 YLIFEFMSM 97 (313)
Q Consensus 89 ~lv~e~~~~ 97 (313)
+.|.+|++|
T Consensus 182 g~I~efi~g 190 (442)
T PTZ00296 182 GRIEEWLYG 190 (442)
T ss_pred CEEEEeeCC
Confidence 356777765
No 496
>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]
Probab=94.58 E-value=0.47 Score=38.47 Aligned_cols=130 Identities=15% Similarity=0.091 Sum_probs=76.6
Q ss_pred eeeccccc-eEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhcCC--CCceeeceeEEeCcEEEEEEeccc
Q psy6391 20 EKIGEGTY-GVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKELNH--PNIVQLHDTMIENYRLYLIFEFMS 96 (313)
Q Consensus 20 ~~lg~g~~-~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~lv~e~~~ 96 (313)
..++.|.+ +.||+....... -+.+|+-.... ...+..|...+.-+.- -.+.++.+.-.+.++-+++|.-++
T Consensus 24 ~~v~~geS~~~v~rl~a~~r~-g~~~k~~~~~~-----~a~L~~Ea~RlrWla~~~l~~P~V~~~~~~~~~~wLl~salp 97 (266)
T COG3231 24 RRVTEGESGAGVFRLFADSRP-GLYLKIASSGP-----AAELEGEAARLRWLAGQGLGCPRVLGLEDDADQAWLLMSALP 97 (266)
T ss_pred ceeeccCCCCeEEEEeccCCC-ceEEEEecCcc-----hhhhhhHHHHHHHhcccCCCCCceEeeccCcchhHHhhhhcC
Confidence 34556666 568876544333 24445433211 2567788888887732 234455566566788889988887
Q ss_pred c-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------------------
Q psy6391 97 M-DLKKYIDTVPKGQFLAADKVKSITYQIFQAILFCHKRR---------------------------------------- 135 (313)
Q Consensus 97 ~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~Lh~~~---------------------------------------- 135 (313)
| ++...-. .++.+. ++.-++.+|+.||...
T Consensus 98 G~~~s~~~~------~~~p~r---~v~~la~aLR~LH~l~~~aCPFd~rl~~rl~~a~~r~~a~~vdesdfd~e~qgr~~ 168 (266)
T COG3231 98 GEDASHPRY------ALDPKR---AVPLLAEALRRLHELPVEACPFDRRLARRLAKARARVRAGLVDESDFDEERQGRTA 168 (266)
T ss_pred CCcccchhh------cCCHHH---HHHHHHHHHHHHhcCChhhCCcchHHHHHHHHHHHHHhccCCChhhcChhhcCCCH
Confidence 7 2211110 122222 2234445555555432
Q ss_pred ------------------ceeccCCCCCEEEecCCCeEEEecCCCccc
Q psy6391 136 ------------------VLHRDLKPQNLLIDAKSNIVKVADFGLARA 165 (313)
Q Consensus 136 ------------------i~H~di~~~Nil~~~~~~~~~l~df~~~~~ 165 (313)
+.|||-+.-|++++...- .-++|+|.+..
T Consensus 169 ~El~d~L~~~rp~~edLVv~HGDACLPN~i~d~~rf-~GfIDlGrlGV 215 (266)
T COG3231 169 EELFDELEARRPAVEDLVVTHGDACLPNFILDGWRF-SGFIDLGRLGV 215 (266)
T ss_pred HHHHHHHHhcCCchhhceeecCcccCcceEecCCce-EEeeecCcccc
Confidence 489999999999988744 77889887753
No 497
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=94.49 E-value=0.076 Score=44.77 Aligned_cols=31 Identities=32% Similarity=0.426 Sum_probs=27.1
Q ss_pred CceeccCCCCCEEEecCCCeEEEecCCCcccc
Q psy6391 135 RVLHRDLKPQNLLIDAKSNIVKVADFGLARAF 166 (313)
Q Consensus 135 ~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~ 166 (313)
-++|+|+.|.|++.+..+. ++|+||..|..-
T Consensus 154 v~cH~Dl~~~N~l~t~~~~-l~LIDWEyAg~~ 184 (269)
T COG0510 154 VPCHNDLNPGNLLLTDKGG-LFLIDWEYAGLN 184 (269)
T ss_pred eeecCCCCccceEEcCCCc-EEEEecccCCCc
Confidence 4889999999999988666 999999999653
No 498
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.04 E-value=0.36 Score=39.37 Aligned_cols=72 Identities=15% Similarity=0.189 Sum_probs=51.5
Q ss_pred eeeeccccceEEEEEEeCcCCcEEEEEEecccCCCCCCchhHHHHHHHHhhc---CCCCceeeceeEEeCcEEEEEEecc
Q psy6391 19 VEKIGEGTYGVVYKAKNKVTGALVAIKKIRMENDDEGIPATAIREISVLKEL---NHPNIVQLHDTMIENYRLYLIFEFM 95 (313)
Q Consensus 19 ~~~lg~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l---~~~~i~~~~~~~~~~~~~~lv~e~~ 95 (313)
.+.+..|.--..|.+.+. ..++.+|+-... ....+..|+.-|..+ +...+.+++....+.++.|+|++|+
T Consensus 21 r~~v~gG~inea~~v~dg--~~~~FvK~n~~~-----~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L 93 (286)
T COG3001 21 REEVSGGDINEAWRLRDG--TDPFFVKCNQRE-----QLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYL 93 (286)
T ss_pred ccccCCccccceeEeecC--CcceEEEecchh-----hHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeec
Confidence 355666777778877664 557888874322 235566777777666 4567888888888999999999999
Q ss_pred cc
Q psy6391 96 SM 97 (313)
Q Consensus 96 ~~ 97 (313)
+.
T Consensus 94 ~~ 95 (286)
T COG3001 94 PT 95 (286)
T ss_pred cC
Confidence 63
No 499
>KOG1236|consensus
Probab=93.89 E-value=0.34 Score=42.96 Aligned_cols=61 Identities=21% Similarity=0.286 Sum_probs=39.7
Q ss_pred EEEEEecccc-CHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHH-HHHhCCceeccCCCCCEEEecCC
Q psy6391 88 LYLIFEFMSM-DLKKYIDTVPKGQFLAADKVKSITYQIFQAIL-FCHKRRVLHRDLKPQNLLIDAKS 152 (313)
Q Consensus 88 ~~lv~e~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~-~Lh~~~i~H~di~~~Nil~~~~~ 152 (313)
.+++-+|..| ++...+.. ...++...+.++.-...|+. .|--.+++|.|+.|.||++....
T Consensus 320 ~vl~E~~~~Gl~v~~~v~~----~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~ 382 (565)
T KOG1236|consen 320 LVLVETYERGLSVLRFVKW----KSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNK 382 (565)
T ss_pred ceeeeeccccccHHhhhhc----ccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecC
Confidence 3556667666 55555543 22455566666666666655 34457899999999999985443
No 500
>PRK10271 thiK thiamine kinase; Provisional
Probab=93.60 E-value=0.072 Score=42.04 Aligned_cols=31 Identities=26% Similarity=0.347 Sum_probs=25.8
Q ss_pred CceeccCCCCCEEEecCCCeEEEecCCCccccC
Q psy6391 135 RVLHRDLKPQNLLIDAKSNIVKVADFGLARAFG 167 (313)
Q Consensus 135 ~i~H~di~~~Nil~~~~~~~~~l~df~~~~~~~ 167 (313)
-.+|+|+.|.|++++.++ ++++||+.+...+
T Consensus 78 ~p~H~D~~~~N~~~~~~~--~~lIDwe~a~~gD 108 (188)
T PRK10271 78 APLHMDVHAGNLVHSASG--LRLIDWEYAGDGD 108 (188)
T ss_pred eeecCCCCCccEEEECCC--EEEEeCCcccCCC
Confidence 368999999999987664 8999999996543
Done!