BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6393
(315 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9P055|JKAMP_HUMAN JNK1/MAPK8-associated membrane protein OS=Homo sapiens GN=JKAMP
PE=2 SV=2
Length = 326
Score = 240 bits (613), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 132/324 (40%), Positives = 193/324 (59%), Gaps = 40/324 (12%)
Query: 6 CAGLYCGRYYL-PDGNL---SACEACPRGFRANALTICEPCNDSPTFYDWLYLGFMVLFP 61
C GLYCG+ L +G+ C CPRG R NA C+PC +SP YDWLYLGFM + P
Sbjct: 24 CLGLYCGKTLLFKNGSTEIYGECGVCPRGQRTNAQKYCQPCTESPELYDWLYLGFMAMLP 83
Query: 62 LICHWFAIDSTPQFTGSQNQKSAFYPIRTFKAKKKNFNKEALILHFTAFVEVSLAAVLTL 121
L+ HWF I+ + KK + AL H TA E S+AA++TL
Sbjct: 84 LVLHWFFIE-------------------WYSGKKSS---SALFQHITALFECSMAAIITL 121
Query: 122 LLVDPVGSYQIRSCNVDKLQDWYTVFYNPNPDYEYTLHCTQEAVYPLYTMVFIFYLLNII 181
L+ DPVG IRSC V L DWYT+ YNP+PDY T+HCT EAVYPLYT+VFI+Y ++
Sbjct: 122 LVSDPVGVLYIRSCRVLMLSDWYTMLYNPSPDYVTTVHCTHEAVYPLYTIVFIYYAFCLV 181
Query: 182 ILTSIRPLIARFCI----RTGAARTVYFGLYLFPVLALVHLICD----YSFAYITIVLSV 233
++ +RPL+ + ++ +++Y LY FP+L ++ + Y+F YI +VLS+
Sbjct: 182 LMMLLRPLLVKKIACGLGKSDRFKSIYAALYFFPILTVLQAVGGGLLYYAFPYIILVLSL 241
Query: 234 VSMATHFAFKIDQSVHFLVVSTVTDLRNCLILLGHWALHAYGLVVITQ-PHVNPALIIL- 291
V++A + + ++ + L+V + ++L HW LHAYG++ I++ + L +L
Sbjct: 242 VTLAVYMSASEIENCYDLLVRK----KRLIVLFSHWLLHAYGIISISRVDKLEQDLPLLA 297
Query: 292 LVPTPALFYILTSRFTDPSHLHSD 315
LVPTPALFY+ T++FT+PS + S+
Sbjct: 298 LVPTPALFYLFTAKFTEPSRILSE 321
>sp|Q8BI36|JKAMP_MOUSE JNK1/MAPK8-associated membrane protein OS=Mus musculus GN=Jkamp
PE=1 SV=2
Length = 311
Score = 240 bits (612), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/329 (40%), Positives = 192/329 (58%), Gaps = 44/329 (13%)
Query: 3 QLRCAGLYCGRYYLPDGNLSA----CEACPRGFRANALTICEPCNDSPTFYDWLYLGFMV 58
Q C GLYCG+ L S C CPRG R NA C+PC +SP YDWLYLGFM
Sbjct: 6 QPACLGLYCGKTLLFKNGSSEIYGECGVCPRGQRTNAQKYCQPCTESPELYDWLYLGFMA 65
Query: 59 LFPLICHWFAIDSTPQFTGSQNQKSAFYPIRTFKAKKKNFNKEALILHFTAFVEVSLAAV 118
+ PL+ HWF I+ + KK + AL H TA E ++AA+
Sbjct: 66 MLPLVLHWFFIE-------------------WYSGKKSS---SALFQHITALFECTMAAI 103
Query: 119 LTLLLVDPVGSYQIRSCNVDKLQDWYTVFYNPNPDYEYTLHCTQEAVYPLYTMVFIFYLL 178
+TLL+ DPVG IRSC V L DWYT+ YNP+PDY T+HCT EAVYPLYT+VF++Y
Sbjct: 104 ITLLVSDPVGVLYIRSCRVLMLSDWYTMLYNPSPDYVTTVHCTHEAVYPLYTIVFVYYAF 163
Query: 179 NIIILTSIRPLIARFCI----RTGAARTVYFGLYLFPVLALVHLICD----YSFAYITIV 230
++++ +RPL+ + ++ +++Y LY FP+L ++ + Y+F YI +V
Sbjct: 164 CLVLMMLLRPLLVKKIACGLGKSDRFKSIYAALYFFPILTVLQAVGGGLLYYAFPYIILV 223
Query: 231 LSVVSMATHFAFKIDQSVHFLVVSTVTDLRNCLILLGHWALHAYGLVVITQ----PHVNP 286
LS+V++A + + ++ + L+V + ++L HW LHAYG+V I++ H P
Sbjct: 224 LSLVTLAVYMSASEIENCYDLLVRK----KRLIVLFSHWLLHAYGIVSISRVDRLEHDLP 279
Query: 287 ALIILLVPTPALFYILTSRFTDPSHLHSD 315
++ LVPTPALFY+ T++FT+PS + S+
Sbjct: 280 --LLALVPTPALFYLFTAKFTEPSRILSE 306
>sp|Q4WPQ8|PRTT_ASPFU Transcriptional activator of proteases prtT OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=prtT PE=3 SV=1
Length = 696
Score = 36.2 bits (82), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 70 DSTPQFTGSQNQKSAFYPIRTFKAKKKNFNKEALILHFTAFVEVSLAAVLTLLLVDPVGS 129
D T GSQ+ A PIR F+ + +F EA +L + SL + T ++DP S
Sbjct: 234 DETASIEGSQSSSFAPRPIRLFQDLQSDFTGEANVLPADS---RSLGDLFTKGIIDPKLS 290
Query: 130 YQIRSCNVDKLQDWYTVFYNPNPDYEYTLHCTQEAVY 166
++ VD W +V NP+ D L T +Y
Sbjct: 291 QKLIQLFVDHFGIWISV-DNPS-DIHNELRATDPLLY 325
>sp|B0Y6K1|PRTT_ASPFC Transcriptional activator of proteases prtT OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=prtT PE=3
SV=1
Length = 696
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Query: 70 DSTPQFTGSQNQKSAFYPIRTFKAKKKNFNKEALILHFTAFVEVSLAAVLTLLLVDPVGS 129
D T GSQ+ A PIR + + +F EA +L + SL + T ++DP S
Sbjct: 234 DETASIEGSQSSSFAPRPIRLLQDLQSDFTGEANVLPADS---RSLGDLFTKGIIDPKLS 290
Query: 130 YQIRSCNVDKLQDWYTVFYNPNPDYEYTLHCTQEAVY 166
++ VD W +V NP+ D L T +Y
Sbjct: 291 QKLIQLFVDHFGIWISV-DNPS-DIHNELRATDPLLY 325
>sp|O28812|Y1460_ARCFU Uncharacterized protein AF_1460 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_1460 PE=4 SV=1
Length = 227
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 153 DYEYTLHCTQ-EAVYPLYTMVFIFYLLNIIILTSIRPLIARFCIRT 197
+Y + H ++ + YPLY ++F+F+LLNI + PL RF I T
Sbjct: 165 NYSHFRHESRSKRAYPLYILLFVFWLLNISLTFRFLPLEFRFAIYT 210
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.143 0.466
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,894,039
Number of Sequences: 539616
Number of extensions: 4506051
Number of successful extensions: 11502
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 11487
Number of HSP's gapped (non-prelim): 9
length of query: 315
length of database: 191,569,459
effective HSP length: 117
effective length of query: 198
effective length of database: 128,434,387
effective search space: 25430008626
effective search space used: 25430008626
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 61 (28.1 bits)