Your job contains 1 sequence.
>psy6393
MDQLRCAGLYCGRYYLPDGNLSACEACPRGFRANALTICEPCNDSPTFYDWLYLGFMVLF
PLICHWFAIDSTPQFTGSQNQKSAFYPIRTFKAKKKNFNKEALILHFTAFVEVSLAAVLT
LLLVDPVGSYQIRSCNVDKLQDWYTVFYNPNPDYEYTLHCTQEAVYPLYTMVFIFYLLNI
IILTSIRPLIARFCIRTGAARTVYFGLYLFPVLALVHLICDYSFAYITIVLSVVSMATHF
AFKIDQSVHFLVVSTVTDLRNCLILLGHWALHAYGLVVITQPHVNPALIILLVPTPALFY
ILTSRFTDPSHLHSD
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6393
(315 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|A6H7J5 - symbol:JAMP "Uncharacterized protein" ... 402 4.8e-58 2
MGI|MGI:1915057 - symbol:Jkamp "JNK1/MAPK8-associated mem... 401 6.1e-58 2
RGD|1308917 - symbol:Jkamp "JNK1/MAPK8-associated membran... 401 6.1e-58 2
UNIPROTKB|Q9P055 - symbol:JKAMP "JNK1/MAPK8-associated me... 401 7.8e-58 2
ZFIN|ZDB-GENE-040718-382 - symbol:jkamp "jnk1/mapk8-assoc... 404 5.4e-57 2
UNIPROTKB|F1NH14 - symbol:JKAMP "Uncharacterized protein"... 413 1.8e-56 2
WB|WBGene00019807 - symbol:jamp-1 species:6239 "Caenorhab... 226 1.6e-30 2
>UNIPROTKB|A6H7J5 [details] [associations]
symbol:JAMP "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IEA] GO:GO:0030433 eggNOG:NOG262492 HOVERGEN:HBG051016
OrthoDB:EOG4MW86K InterPro:IPR008485 PANTHER:PTHR12740 Pfam:PF05571
GeneTree:ENSGT00390000018097 HOGENOM:HOG000290710 OMA:VVLFSHW
EMBL:DAAA02029288 EMBL:BC146270 IPI:IPI00709882 UniGene:Bt.59662
STRING:A6H7J5 Ensembl:ENSBTAT00000004373 InParanoid:A6H7J5
Uniprot:A6H7J5
Length = 311
Score = 402 (146.6 bits), Expect = 4.8e-58, Sum P(2) = 4.8e-58
Identities = 84/223 (37%), Positives = 130/223 (58%)
Query: 103 LILHFTAFXXXXXXXXXXXXXXXXXGSYQIRSCNVDKLQDWYTVFYNPNPDYEYTLHCTQ 162
L H TA G IRSC V L DWYT+ YNP+PDY T+HCT
Sbjct: 88 LFQHITALFECTVAALVTLLVSEPVGVLHIRSCRVLMLSDWYTMLYNPSPDYVTTVHCTH 147
Query: 163 EAVYPLYTMVFIFYLLNIIILTSIRPLIAR-FCIRTGAA---RTVYFGLYLFPVLALVHL 218
EAVYPLYT+VFI+Y ++++ +RPL+ + G + +++Y LY FP+L ++
Sbjct: 148 EAVYPLYTIVFIYYAFCLVLMMLLRPLLVKKIACGLGKSDRFKSIYAALYFFPILTVLQA 207
Query: 219 ICD----YSFAYITIVLSVVSMATHFAFKIDQSVHFLVVSTVTDLRNCLILLGHWALHAY 274
+ Y+F YI +VLS+V++A + + ++ + L+V + ++L HW LHAY
Sbjct: 208 VGGGLLYYAFPYIILVLSLVTLAVYMSASEIENCYDLLVRK----KRLIVLFSHWLLHAY 263
Query: 275 GLVVITQ-PHVNPALIIL-LVPTPALFYILTSRFTDPSHLHSD 315
G++ I++ + L +L LVPTPALFY+ T++FT+PS + S+
Sbjct: 264 GIISISRVDKLEQDLPLLALVPTPALFYLFTAKFTEPSRILSE 306
Score = 212 (79.7 bits), Expect = 4.8e-58, Sum P(2) = 4.8e-58
Identities = 40/90 (44%), Positives = 53/90 (58%)
Query: 3 QLRCAGLYCGRYYL-PDGNLSA---CEACPRGFRANALTICEPCNDSPTFYDWLYLGFMV 58
Q C GLYCG+ L +G+ C CPRG R NA C+PC +SP YDWLYLGFM
Sbjct: 6 QPACLGLYCGKTLLFKNGSTEIYGECGVCPRGQRTNAQKYCQPCTESPELYDWLYLGFMA 65
Query: 59 LFPLICHWFAIDSTPQFTGSQNQKSAFYPI 88
+ PL+ HWF I+ ++G ++ + F I
Sbjct: 66 MLPLVLHWFFIE---WYSGKKSSSALFQHI 92
>MGI|MGI:1915057 [details] [associations]
symbol:Jkamp "JNK1/MAPK8-associated membrane protein"
species:10090 "Mus musculus" [GO:0005575 "cellular_component"
evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006986 "response to unfolded protein" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=ISO] [GO:0031625 "ubiquitin protein
ligase binding" evidence=ISO] MGI:MGI:1915057 GO:GO:0016021
GO:GO:0005789 GO:GO:0030433 GO:GO:0006986 EMBL:CR974486 CTD:51528
eggNOG:NOG262492 HOVERGEN:HBG051016 InterPro:IPR008485
PANTHER:PTHR12740 Pfam:PF05571 EMBL:AK013502 EMBL:AK004555
EMBL:BC002238 IPI:IPI00282413 IPI:IPI00467159 RefSeq:NP_001191996.1
RefSeq:NP_077167.1 UniGene:Mm.258935 STRING:Q8BI36
PhosphoSite:Q8BI36 PRIDE:Q8BI36 Ensembl:ENSMUST00000057257
Ensembl:ENSMUST00000117449 GeneID:104771 KEGG:mmu:104771
UCSC:uc007nvf.1 UCSC:uc007nvg.1 GeneTree:ENSGT00390000018097
HOGENOM:HOG000290710 InParanoid:Q8BI36 OMA:VVLFSHW NextBio:357276
Bgee:Q8BI36 CleanEx:MM_1200003C05RIK Genevestigator:Q8BI36
GermOnline:ENSMUSG00000005078 Uniprot:Q8BI36
Length = 311
Score = 401 (146.2 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
Identities = 84/223 (37%), Positives = 130/223 (58%)
Query: 103 LILHFTAFXXXXXXXXXXXXXXXXXGSYQIRSCNVDKLQDWYTVFYNPNPDYEYTLHCTQ 162
L H TA G IRSC V L DWYT+ YNP+PDY T+HCT
Sbjct: 88 LFQHITALFECTMAAIITLLVSDPVGVLYIRSCRVLMLSDWYTMLYNPSPDYVTTVHCTH 147
Query: 163 EAVYPLYTMVFIFYLLNIIILTSIRPLIAR-FCIRTGAA---RTVYFGLYLFPVLALVHL 218
EAVYPLYT+VF++Y ++++ +RPL+ + G + +++Y LY FP+L ++
Sbjct: 148 EAVYPLYTIVFVYYAFCLVLMMLLRPLLVKKIACGLGKSDRFKSIYAALYFFPILTVLQA 207
Query: 219 ICD----YSFAYITIVLSVVSMATHFAFKIDQSVHFLVVSTVTDLRNCLILLGHWALHAY 274
+ Y+F YI +VLS+V++A + + ++ + L+V + ++L HW LHAY
Sbjct: 208 VGGGLLYYAFPYIILVLSLVTLAVYMSASEIENCYDLLVRK----KRLIVLFSHWLLHAY 263
Query: 275 GLVVITQ-PHVNPALIIL-LVPTPALFYILTSRFTDPSHLHSD 315
G+V I++ + L +L LVPTPALFY+ T++FT+PS + S+
Sbjct: 264 GIVSISRVDRLEHDLPLLALVPTPALFYLFTAKFTEPSRILSE 306
Score = 212 (79.7 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
Identities = 40/90 (44%), Positives = 53/90 (58%)
Query: 3 QLRCAGLYCGRYYL-PDGN---LSACEACPRGFRANALTICEPCNDSPTFYDWLYLGFMV 58
Q C GLYCG+ L +G+ C CPRG R NA C+PC +SP YDWLYLGFM
Sbjct: 6 QPACLGLYCGKTLLFKNGSSEIYGECGVCPRGQRTNAQKYCQPCTESPELYDWLYLGFMA 65
Query: 59 LFPLICHWFAIDSTPQFTGSQNQKSAFYPI 88
+ PL+ HWF I+ ++G ++ + F I
Sbjct: 66 MLPLVLHWFFIE---WYSGKKSSSALFQHI 92
>RGD|1308917 [details] [associations]
symbol:Jkamp "JNK1/MAPK8-associated membrane protein"
species:10116 "Rattus norvegicus" [GO:0030433 "ER-associated
protein catabolic process" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] RGD:1308917 EMBL:CH473947
CTD:51528 OrthoDB:EOG4MW86K InterPro:IPR008485 PANTHER:PTHR12740
Pfam:PF05571 GeneTree:ENSGT00390000018097 OMA:VVLFSHW
IPI:IPI00365829 RefSeq:NP_001100208.1 UniGene:Rn.106021
Ensembl:ENSRNOT00000006321 GeneID:299127 KEGG:rno:299127
UCSC:RGD:1308917 NextBio:644819 Uniprot:D3ZZT8
Length = 311
Score = 401 (146.2 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
Identities = 84/223 (37%), Positives = 130/223 (58%)
Query: 103 LILHFTAFXXXXXXXXXXXXXXXXXGSYQIRSCNVDKLQDWYTVFYNPNPDYEYTLHCTQ 162
L H TA G IRSC V L DWYT+ YNP+PDY T+HCT
Sbjct: 88 LFQHITALFECTMAAIITLLVSDPVGVLYIRSCRVLMLSDWYTMLYNPSPDYVTTVHCTH 147
Query: 163 EAVYPLYTMVFIFYLLNIIILTSIRPLIAR-FCIRTGAA---RTVYFGLYLFPVLALVHL 218
EAVYPLYT+VF++Y ++++ +RPL+ + G + +++Y LY FP+L ++
Sbjct: 148 EAVYPLYTIVFVYYAFCLVLMMLLRPLLVKKIACGLGKSDRFKSIYAALYFFPILTVLQA 207
Query: 219 ICD----YSFAYITIVLSVVSMATHFAFKIDQSVHFLVVSTVTDLRNCLILLGHWALHAY 274
+ Y+F YI +VLS+V++A + + ++ + L+V + ++L HW LHAY
Sbjct: 208 VGGGLLYYAFPYIILVLSLVTLAVYMSASEIENCYDLLVRK----KRLIVLFSHWLLHAY 263
Query: 275 GLVVITQ-PHVNPALIIL-LVPTPALFYILTSRFTDPSHLHSD 315
G+V I++ + L +L LVPTPALFY+ T++FT+PS + S+
Sbjct: 264 GIVSISRVDRLEHDLPLLALVPTPALFYLFTAKFTEPSRILSE 306
Score = 212 (79.7 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
Identities = 40/90 (44%), Positives = 53/90 (58%)
Query: 3 QLRCAGLYCGRYYL-PDGN---LSACEACPRGFRANALTICEPCNDSPTFYDWLYLGFMV 58
Q C GLYCG+ L +G+ C CPRG R NA C+PC +SP YDWLYLGFM
Sbjct: 6 QPACLGLYCGKTLLFKNGSSEIYGECGVCPRGQRTNAQKYCQPCTESPELYDWLYLGFMA 65
Query: 59 LFPLICHWFAIDSTPQFTGSQNQKSAFYPI 88
+ PL+ HWF I+ ++G ++ + F I
Sbjct: 66 MLPLVLHWFFIE---WYSGKKSSSALFQHI 92
>UNIPROTKB|Q9P055 [details] [associations]
symbol:JKAMP "JNK1/MAPK8-associated membrane protein"
species:9606 "Homo sapiens" [GO:0006986 "response to unfolded
protein" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0030433 "ER-associated protein catabolic process"
evidence=IDA] GO:GO:0016021 EMBL:CH471061 GO:GO:0005789
GO:GO:0030433 GO:GO:0006986 EMBL:AF529304 EMBL:AF151047
EMBL:AF161445 EMBL:AL136696 EMBL:AK021683 EMBL:AK027591
EMBL:AK298209 EMBL:AF212245 EMBL:BX161501 EMBL:CR457163
EMBL:CR533510 EMBL:BC005198 EMBL:BC010359 IPI:IPI00384318
IPI:IPI00384319 IPI:IPI00396003 IPI:IPI00847220 IPI:IPI00942865
RefSeq:NP_001092095.1 RefSeq:NP_057559.2 UniGene:Hs.446850
STRING:Q9P055 PhosphoSite:Q9P055 DMDM:38257782 PRIDE:Q9P055
DNASU:51528 Ensembl:ENST00000261247 Ensembl:ENST00000356057
Ensembl:ENST00000425728 GeneID:51528 KEGG:hsa:51528 UCSC:uc001xef.4
UCSC:uc001xeg.4 UCSC:uc001xeh.4 UCSC:uc001xej.4 CTD:51528
GeneCards:GC14P059952 H-InvDB:HIX0011705 HGNC:HGNC:20184
HPA:HPA031172 MIM:611176 neXtProt:NX_Q9P055 PharmGKB:PA165479069
eggNOG:NOG262492 HOVERGEN:HBG051016 InParanoid:Q9P055
OrthoDB:EOG4MW86K GenomeRNAi:51528 NextBio:55244 Bgee:Q9P055
Genevestigator:Q9P055 GermOnline:ENSG00000050130 InterPro:IPR008485
PANTHER:PTHR12740 Pfam:PF05571 Uniprot:Q9P055
Length = 326
Score = 401 (146.2 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 84/223 (37%), Positives = 130/223 (58%)
Query: 103 LILHFTAFXXXXXXXXXXXXXXXXXGSYQIRSCNVDKLQDWYTVFYNPNPDYEYTLHCTQ 162
L H TA G IRSC V L DWYT+ YNP+PDY T+HCT
Sbjct: 103 LFQHITALFECSMAAIITLLVSDPVGVLYIRSCRVLMLSDWYTMLYNPSPDYVTTVHCTH 162
Query: 163 EAVYPLYTMVFIFYLLNIIILTSIRPLIAR-FCIRTGAA---RTVYFGLYLFPVLALVHL 218
EAVYPLYT+VFI+Y ++++ +RPL+ + G + +++Y LY FP+L ++
Sbjct: 163 EAVYPLYTIVFIYYAFCLVLMMLLRPLLVKKIACGLGKSDRFKSIYAALYFFPILTVLQA 222
Query: 219 ICD----YSFAYITIVLSVVSMATHFAFKIDQSVHFLVVSTVTDLRNCLILLGHWALHAY 274
+ Y+F YI +VLS+V++A + + ++ + L+V + ++L HW LHAY
Sbjct: 223 VGGGLLYYAFPYIILVLSLVTLAVYMSASEIENCYDLLVRK----KRLIVLFSHWLLHAY 278
Query: 275 GLVVITQ-PHVNPALIIL-LVPTPALFYILTSRFTDPSHLHSD 315
G++ I++ + L +L LVPTPALFY+ T++FT+PS + S+
Sbjct: 279 GIISISRVDKLEQDLPLLALVPTPALFYLFTAKFTEPSRILSE 321
Score = 211 (79.3 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 39/87 (44%), Positives = 52/87 (59%)
Query: 6 CAGLYCGRYYL-PDGNLSA---CEACPRGFRANALTICEPCNDSPTFYDWLYLGFMVLFP 61
C GLYCG+ L +G+ C CPRG R NA C+PC +SP YDWLYLGFM + P
Sbjct: 24 CLGLYCGKTLLFKNGSTEIYGECGVCPRGQRTNAQKYCQPCTESPELYDWLYLGFMAMLP 83
Query: 62 LICHWFAIDSTPQFTGSQNQKSAFYPI 88
L+ HWF I+ ++G ++ + F I
Sbjct: 84 LVLHWFFIE---WYSGKKSSSALFQHI 107
>ZFIN|ZDB-GENE-040718-382 [details] [associations]
symbol:jkamp "jnk1/mapk8-associated membrane
protein" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
ZFIN:ZDB-GENE-040718-382 CTD:51528 eggNOG:NOG262492
HOVERGEN:HBG051016 OrthoDB:EOG4MW86K InterPro:IPR008485
PANTHER:PTHR12740 Pfam:PF05571 HOGENOM:HOG000290710 EMBL:BC075939
IPI:IPI00484516 RefSeq:NP_956776.2 UniGene:Dr.9222 STRING:Q6DHM8
GeneID:393454 KEGG:dre:393454 InParanoid:Q6DHM8 NextBio:20814490
ArrayExpress:Q6DHM8 Uniprot:Q6DHM8
Length = 309
Score = 404 (147.3 bits), Expect = 5.4e-57, Sum P(2) = 5.4e-57
Identities = 87/223 (39%), Positives = 128/223 (57%)
Query: 103 LILHFTAFXXXXXXXXXXXXXXXXXGSYQIRSCNVDKLQDWYTVFYNPNPDYEYTLHCTQ 162
L H TA G IRSC V L DWYT+ YNP+PDY TLHCTQ
Sbjct: 86 LFQHITALFECTVAAVVTLLLNDPVGQLYIRSCEVKMLSDWYTMLYNPSPDYVTTLHCTQ 145
Query: 163 EAVYPLYTMVFIFYLLNIIILTSIRPLIAR--FCI--RTGAARTVYFGLYLFPVLALVHL 218
EAV+PLYT+V I+Y ++ + +RPL+ + C +T +++Y LY FP+L ++
Sbjct: 146 EAVFPLYTIVLIYYAFCLVFMMLLRPLLVKKIACGLGKTDRFKSIYAALYFFPILTVLQA 205
Query: 219 ICD----YSFAYITIVLSVVSMATHFAFKIDQSVHFLVVSTVTDLRNCLILLGHWALHAY 274
+ Y+F YI +VLS+V++A + + QS LV + ++L HW LHAY
Sbjct: 206 VGGGLLYYAFPYIILVLSLVTLAVYMSASEIQSFKNLVAKK----KRLVVLFSHWLLHAY 261
Query: 275 GLVVITQ-PHVNPALIIL-LVPTPALFYILTSRFTDPSHLHSD 315
G++ I++ + L +L LVP PALFY+LT+RFT+P+ + S+
Sbjct: 262 GIISISRLDKLGQDLPLLALVPGPALFYLLTARFTEPNRILSE 304
Score = 200 (75.5 bits), Expect = 5.4e-57, Sum P(2) = 5.4e-57
Identities = 38/85 (44%), Positives = 47/85 (55%)
Query: 6 CAGLYCGRYYLPDGN--LSACEACPRGFRANALTICEPCNDSPTFYDWLYLGFMVLFPLI 63
C GLYCGR + D C CPRG R N IC C SP YDWLYLGFM + PL+
Sbjct: 9 CPGLYCGRTSINDTTDMWGECGVCPRGERTNLEKICMKCTGSPDLYDWLYLGFMAMLPLV 68
Query: 64 CHWFAIDSTPQFTGSQNQKSAFYPI 88
HWF I+ ++G ++ + F I
Sbjct: 69 LHWFFIE---WYSGKKSSSALFQHI 90
>UNIPROTKB|F1NH14 [details] [associations]
symbol:JKAMP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0030433 "ER-associated protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] GO:GO:0030433 InterPro:IPR008485 PANTHER:PTHR12740
Pfam:PF05571 GeneTree:ENSGT00390000018097 OMA:VVLFSHW
EMBL:AADN02003912 IPI:IPI00598586 Ensembl:ENSGALT00000019598
Uniprot:F1NH14
Length = 311
Score = 413 (150.4 bits), Expect = 1.8e-56, Sum P(2) = 1.8e-56
Identities = 86/223 (38%), Positives = 132/223 (59%)
Query: 103 LILHFTAFXXXXXXXXXXXXXXXXXGSYQIRSCNVDKLQDWYTVFYNPNPDYEYTLHCTQ 162
L+ H TA GS IRSC V KL DWYT+ YNP+PDY T+HCT
Sbjct: 88 LLQHITALFECSIAAIVTLLVSDPAGSLHIRSCKVKKLSDWYTMLYNPSPDYITTVHCTH 147
Query: 163 EAVYPLYTMVFIFYLLNIIILTSIRP-LIARFCIRTGAA---RTVYFGLYLFPVLALVHL 218
EAVYPLYT+VFI+Y ++++ +RP L+ + G + +++Y LY FPVL ++
Sbjct: 148 EAVYPLYTIVFIYYAFCLVLMMLLRPFLVKKIACGLGKSDRFKSIYAALYFFPVLTVLQA 207
Query: 219 ICD----YSFAYITIVLSVVSMATHFAFKIDQSVHFLVVSTVTDLRNCLILLGHWALHAY 274
+ Y+F YI +VLS+V++A + + +S L+V + ++LL HW LHAY
Sbjct: 208 VGGGLLYYAFPYIILVLSLVTLAVYLSASEVESFKDLLVRK----KRLVVLLSHWLLHAY 263
Query: 275 GLVVITQ-PHVNPALIIL-LVPTPALFYILTSRFTDPSHLHSD 315
G++ I + + L +L LVP PA+FY++T+++T+PS + S+
Sbjct: 264 GIISIPKLDKLEQDLPLLALVPAPAIFYLMTAKYTEPSRILSE 306
Score = 186 (70.5 bits), Expect = 1.8e-56, Sum P(2) = 1.8e-56
Identities = 35/72 (48%), Positives = 43/72 (59%)
Query: 3 QLRCAGLYCGRYYLP-DGNLSA---CEACPRGFRANALTICEPCNDSPTFYDWLYLGFMV 58
Q C GLYCGR L +G++ C CPRG R + IC C SP YDWLYLG+M
Sbjct: 6 QPACLGLYCGRVVLAVNGSVEVYGDCGVCPRGQRTDDNKICRECLGSPDRYDWLYLGYMA 65
Query: 59 LFPLICHWFAID 70
+ PL+ HWF I+
Sbjct: 66 MLPLVLHWFFIE 77
>WB|WBGene00019807 [details] [associations]
symbol:jamp-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] GO:GO:0016021
InterPro:IPR008485 PANTHER:PTHR12740 Pfam:PF05571
GeneTree:ENSGT00390000018097 OMA:VVLFSHW EMBL:AF304119
EMBL:FO081258 PIR:T33304 RefSeq:NP_504568.1 UniGene:Cel.19408
EnsemblMetazoa:R01B10.5.1 EnsemblMetazoa:R01B10.5.2 GeneID:178993
KEGG:cel:CELE_R01B10.5 CTD:178993 WormBase:R01B10.5 NextBio:903448
Uniprot:G5EBX4
Length = 326
Score = 226 (84.6 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 50/191 (26%), Positives = 99/191 (51%)
Query: 129 SYQIRSCNVDKLQDWYTVFYNPNPDYEYTLHCTQEAVYPLYTMVFIFYLLNIIILTSIRP 188
++ + C+ +++WY YNP Y T+ CT E V+PLY++ FI +L+ I + +R
Sbjct: 132 TFFLNGCSKTDIKEWYPACYNPRIGYTKTMRCTYEVVFPLYSITFIHHLILIGSILVLRS 191
Query: 189 LIARFCI---RTGAARTVYFGLYLFPVLALVHLICD----YSFAYITIVLSVVSMATHFA 241
+ +C+ +T + Y + P+LA++H + Y+F YI ++ S+ +M H A
Sbjct: 192 TL--YCVLLYKTYNGKPFYAAIVSVPILAVIHAVLSGVVFYTFPYILLIGSLWAMCFHLA 249
Query: 242 FKIDQSVHFLVVSTVTDLRNCLILLGHWALHAYGLVVITQPHVNPAL--IILLVPTPALF 299
+ + + ++V T + + L + ++G++ I P P + +VP P +F
Sbjct: 250 LEGKRPLKEMIVRIATSPTHLIFLSITMLMLSFGVIAIIAPLDIPYRWSFLCIVPVPFIF 309
Query: 300 YILTSRFTDPS 310
Y+ T F++P+
Sbjct: 310 YMATIPFSNPT 320
Score = 126 (49.4 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 20 NLSACEACPRGFRANALTICEPCNDSPTF-YDWLYLGFMVLFPLICH 65
+LS C C G+R NA++ICE C D+P YDW+YL F+ L PL+ H
Sbjct: 43 SLSRCGPCSFGYRNNAMSICESC-DTPLQPYDWMYLLFIALLPLLLH 88
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.332 0.144 0.480 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 315 286 0.00086 115 3 11 21 0.37 33
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 607 (65 KB)
Total size of DFA: 228 KB (2124 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.27u 0.11s 21.38t Elapsed: 00:00:01
Total cpu time: 21.27u 0.11s 21.38t Elapsed: 00:00:01
Start: Thu Aug 15 11:03:11 2013 End: Thu Aug 15 11:03:12 2013