BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6394
(1045 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P11182|ODB2_HUMAN Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex, mitochondrial OS=Homo
sapiens GN=DBT PE=1 SV=3
Length = 482
Score = 313 bits (801), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 183/476 (38%), Positives = 270/476 (56%), Gaps = 63/476 (13%)
Query: 435 HHHLHT-SCIRHKLIQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASV 493
HH L T + +R +++QF L+DIGEGIREV +KEW V EG +++FD +CEV+SDKASV
Sbjct: 51 HHFLKTTAALRGQVVQFKLSDIGEGIREVTVKEWY--VKEGDTVSQFDSICEVQSDKASV 108
Query: 494 TITSRYKGTVRKVYYGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVS------ 547
TITSRY G ++K+YY D+A VGKPL+DIE E + E D ++ P VS
Sbjct: 109 TITSRYDGVIKKLYYNLDDIAYVGKPLVDIETE--ALKDSEEDVVE---TPAVSHDEHTH 163
Query: 548 -EVNTPDTSDQPNETLHKDPNKIDTKELRGTGKQGRVLKEDIITYMNSPSDETNPAHTAH 606
E+ T P N I E+ G+GK GR+LKEDI+ Y+
Sbjct: 164 QEIKGRKTLATPAVRRLAMENNIKLSEVVGSGKDGRILKEDILNYLE------------- 210
Query: 607 VREASNVISIRGYVKGMFKSMTEAN-TIPSLRLTEEVDTTQLRDVKKEDIITYMNSPSDE 665
++ ++ V+ M + T+P L V K + T D+
Sbjct: 211 -KQTGAILPPSPKVEIMPPPPKPKDMTVPIL-------------VSKPPVFT----GKDK 252
Query: 666 TNPAHTAHVREASNVIPIRGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKNQVSALY 725
T P I+G+ K M K+M+ A IP +E+D T+L ++ ++ +
Sbjct: 253 TEP--------------IKGFQKAMVKTMSAALKIPHFGYCDEIDLTELVKLREELKPIA 298
Query: 726 QEKFRLKLTYMPFFIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVP 785
+ +KL++MPFF+KA SL + + PILNAS+D +NI HNI IA+DT+ GL+VP
Sbjct: 299 FAR-GIKLSFMPFFLKAASLGLLQFPILNASVDENCQNITYKASHNIGIAMDTEQGLIVP 357
Query: 786 NIKSVNKLCLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQ 845
N+K+V + DI EL R+Q G++ D+ GGT ++SN+G++GGT +P+I+P +
Sbjct: 358 NVKNVQICSIFDIATELNRLQKLGSVGQLSTTDLTGGTFTLSNIGSIGGTFAKPVIMPPE 417
Query: 846 VCIVAFGKIQLLPRFDAEMRIVAKCILNVTWAADHRVVDGATVARAATLWKS-LEN 900
V I A G I+ +PRF+ + + I+NV+W+ADHRV+DGAT++R + LWKS LEN
Sbjct: 418 VAIGALGSIKAIPRFNQKGEVYKAQIMNVSWSADHRVIDGATMSRFSNLWKSYLEN 473
Score = 157 bits (396), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 107/152 (70%)
Query: 892 ATLWKSLENILVNPDHNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKV 951
A++ ++ +NI HNI IA+DT+ GL+VPN+K+V S+ DI EL R+Q G++
Sbjct: 327 ASVDENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQICSIFDIATELNRLQKLGSVGQL 386
Query: 952 LPRDIQGGTISMSNVGNVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNV 1011
D+ GGT ++SN+G++GGT +P+I+P +V I A G I+ +PRF+ + V I+NV
Sbjct: 387 STTDLTGGTFTLSNIGSIGGTFAKPVIMPPEVAIGALGSIKAIPRFNQKGEVYKAQIMNV 446
Query: 1012 TWAADHRVVDGATVARAATLWKSLVENPALLL 1043
+W+ADHRV+DGAT++R + LWKS +ENPA +L
Sbjct: 447 SWSADHRVIDGATMSRFSNLWKSYLENPAFML 478
Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 115/211 (54%), Gaps = 53/211 (25%)
Query: 175 HHHLHT-SCIRHKLIQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASV 233
HH L T + +R +++QFKL+DIGEGIREV +KEW V EG +++FD +CEV+SDKASV
Sbjct: 51 HHFLKTTAALRGQVVQFKLSDIGEGIREVTVKEWY--VKEGDTVSQFDSICEVQSDKASV 108
Query: 234 TITSRYKGTVRKVYYGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPD 293
TITSRY G ++K+YY D+A VGKPL+DIE E + E D ++
Sbjct: 109 TITSRYDGVIKKLYYNLDDIAYVGKPLVDIET--EALKDSEEDVVE-------------- 152
Query: 294 TSDQPNETLHKEPNKVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVR 353
TP +S D H +Q + K LATP+VR
Sbjct: 153 ---------------------------TPAVSHD---EHTHQEIKGRKT----LATPAVR 178
Query: 354 RMIKHYEIDTKELRGTGKQGRVLKEDIITYM 384
R+ I E+ G+GK GR+LKEDI+ Y+
Sbjct: 179 RLAMENNIKLSEVVGSGKDGRILKEDILNYL 209
>sp|P53395|ODB2_MOUSE Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex, mitochondrial OS=Mus
musculus GN=Dbt PE=2 SV=2
Length = 482
Score = 310 bits (793), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 182/480 (37%), Positives = 263/480 (54%), Gaps = 67/480 (13%)
Query: 433 QCHHHLHTSCI-RHKLIQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKA 491
Q H L T+ + + +++QF L+DIGEGIREV IKEW V EG +++FD +CEV+SDKA
Sbjct: 49 QPRHSLRTAAVLQGQVVQFKLSDIGEGIREVTIKEWY--VKEGDTVSQFDSICEVQSDKA 106
Query: 492 SVTITSRYKGTVRKVYYGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVS---- 547
SVTITSRY G ++++YY D+A VGKPL+DIE E + E D ++ P VS
Sbjct: 107 SVTITSRYDGVIKRLYYNLDDIAYVGKPLIDIETE--ALKDSEEDVVE---TPAVSHDEH 161
Query: 548 ---EVNTPDTSDQPNETLHKDPNKIDTKELRGTGKQGRVLKEDIITYMNSPSDETNPAHT 604
E+ T P N I E+ G+GK GR+LKEDI++++ + P
Sbjct: 162 THQEIKGQKTLATPAVRRLAMENNIKLSEVVGSGKDGRILKEDILSFLEKQTGAILP--- 218
Query: 605 AHVREASNVISIRGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSPSD 664
PS K +I P D
Sbjct: 219 -----------------------------PS---------------PKSEITPPPPQPKD 234
Query: 665 ETNPAHTAH---VREASNVIPIRGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKNQV 721
T P A P+ G+ K M K+M+ A IP +E+D TQL ++ ++
Sbjct: 235 RTFPTPIAKPPVFTGKDRTEPVTGFQKAMVKTMSAALKIPHFGYCDEIDLTQLVKLREEL 294
Query: 722 SALYQEKFRLKLTYMPFFIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHG 781
+ + +KL++MPFF+KA SL + + PILNAS+D +NI HNI IA+DT+ G
Sbjct: 295 KPVALAR-GIKLSFMPFFLKAASLGLLQFPILNASVDENCQNITYKASHNIGIAMDTELG 353
Query: 782 LVVPNIKSVNKLCLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPII 841
L+VPN+K+V + +I EL R+Q G++ D+ GGT ++SN+G++GGT +P+I
Sbjct: 354 LIVPNVKNVQVRSVFEIAMELNRLQKLGSSGQLGTTDLTGGTFTLSNIGSIGGTYAKPVI 413
Query: 842 VPGQVCIVAFGKIQLLPRFDAEMRIVAKCILNVTWAADHRVVDGATVARAATLWKS-LEN 900
+P +V I A G I+ LPRFD + + I+NV+W+ADHRV+DGAT++R + LWKS LEN
Sbjct: 414 LPPEVAIGALGAIKALPRFDQKGDVYKAQIMNVSWSADHRVIDGATMSRFSNLWKSYLEN 473
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 107/152 (70%)
Query: 892 ATLWKSLENILVNPDHNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKV 951
A++ ++ +NI HNI IA+DT+ GL+VPN+K+V S+ +I EL R+Q G++
Sbjct: 327 ASVDENCQNITYKASHNIGIAMDTELGLIVPNVKNVQVRSVFEIAMELNRLQKLGSSGQL 386
Query: 952 LPRDIQGGTISMSNVGNVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNV 1011
D+ GGT ++SN+G++GGT +P+I+P +V I A G I+ LPRFD + V I+NV
Sbjct: 387 GTTDLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGAIKALPRFDQKGDVYKAQIMNV 446
Query: 1012 TWAADHRVVDGATVARAATLWKSLVENPALLL 1043
+W+ADHRV+DGAT++R + LWKS +ENPA +L
Sbjct: 447 SWSADHRVIDGATMSRFSNLWKSYLENPAFML 478
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 116/213 (54%), Gaps = 53/213 (24%)
Query: 173 QCHHHLHTSCI-RHKLIQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKA 231
Q H L T+ + + +++QFKL+DIGEGIREV IKEW V EG +++FD +CEV+SDKA
Sbjct: 49 QPRHSLRTAAVLQGQVVQFKLSDIGEGIREVTIKEWY--VKEGDTVSQFDSICEVQSDKA 106
Query: 232 SVTITSRYKGTVRKVYYGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNT 291
SVTITSRY G ++++YY D+A VGKPL+DIE E + E D ++
Sbjct: 107 SVTITSRYDGVIKRLYYNLDDIAYVGKPLIDIET--EALKDSEEDVVE------------ 152
Query: 292 PDTSDQPNETLHKEPNKVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPS 351
TP +S D H +Q + K LATP+
Sbjct: 153 -----------------------------TPAVSHD---EHTHQEIKGQKT----LATPA 176
Query: 352 VRRMIKHYEIDTKELRGTGKQGRVLKEDIITYM 384
VRR+ I E+ G+GK GR+LKEDI++++
Sbjct: 177 VRRLAMENNIKLSEVVGSGKDGRILKEDILSFL 209
>sp|P11181|ODB2_BOVIN Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex, mitochondrial OS=Bos taurus
GN=DBT PE=1 SV=2
Length = 482
Score = 308 bits (789), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 186/517 (35%), Positives = 274/517 (52%), Gaps = 71/517 (13%)
Query: 400 REASNVISIRGY-VKGMFKSMTEAHGHHLSTPPLQCHHHLH----TSCIRHKLIQFNLAD 454
R A +I +R + G + + PP + H T+ ++ +++QF L+D
Sbjct: 12 RAAGQLICVRYFQTCGNVHVLKPKYVCFFGYPPFKYSHPYQWLKTTAALQGQIVQFKLSD 71
Query: 455 IGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYYGEGDVA 514
IGEGIREV +KEW V EG +++FD +CEV+SDKASVTITSRY G ++K+YY D A
Sbjct: 72 IGEGIREVTVKEWY--VKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLDDTA 129
Query: 515 LVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVS-------EVNTPDTSDQPNETLHKDPN 567
VGKPL+DIE E + E D ++ P VS E+ T P N
Sbjct: 130 YVGKPLVDIETE--ALKDSEEDVVE---TPAVSHDEHTHQEIKGQKTLATPAVRRLAMEN 184
Query: 568 KIDTKELRGTGKQGRVLKEDIITYMNSPSDETNPAHTAHVREASNVISIRGYVKGMFKSM 627
I E+ G+GK GR+LKEDI+ Y+ + P
Sbjct: 185 NIKLSEVIGSGKDGRILKEDILNYLEKQTGAILP-------------------------- 218
Query: 628 TEANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSPSDETNPAHTAH---VREASNVIPIR 684
PS K +I+ P D T P + P++
Sbjct: 219 ------PS---------------PKAEIMPPPPKPKDRTIPIPISKPPVFIGKDRTEPVK 257
Query: 685 GYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIKALS 744
G+ K M K+M+ A IP +EVD T+L ++ ++ + + +KL++MPFF+KA S
Sbjct: 258 GFHKAMVKTMSAALKIPHFGYCDEVDLTELVKLREELKPIAFAR-GIKLSFMPFFLKAAS 316
Query: 745 LCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLR 804
L + + PILNAS+D +NI HNI IA+DT+ GL+VPN+K+V + +I EL R
Sbjct: 317 LGLLQFPILNASVDENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNR 376
Query: 805 IQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPRFDAEM 864
+Q G++ D+ GGT ++SN+G++GGT +P+I+P +V I A G I+ LPRF+ +
Sbjct: 377 LQKLGSAGQLSTNDLIGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGTIKALPRFNEKG 436
Query: 865 RIVAKCILNVTWAADHRVVDGATVARAATLWKS-LEN 900
+ I+NV+W+ADHR++DGATV+R + LWKS LEN
Sbjct: 437 EVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLEN 473
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 107/152 (70%)
Query: 892 ATLWKSLENILVNPDHNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKV 951
A++ ++ +NI HNI IA+DT+ GL+VPN+K+V S+ +I EL R+Q G++
Sbjct: 327 ASVDENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQL 386
Query: 952 LPRDIQGGTISMSNVGNVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNV 1011
D+ GGT ++SN+G++GGT +P+I+P +V I A G I+ LPRF+ + V I+NV
Sbjct: 387 STNDLIGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGTIKALPRFNEKGEVCKAQIMNV 446
Query: 1012 TWAADHRVVDGATVARAATLWKSLVENPALLL 1043
+W+ADHR++DGATV+R + LWKS +ENPA +L
Sbjct: 447 SWSADHRIIDGATVSRFSNLWKSYLENPAFML 478
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 119/230 (51%), Gaps = 56/230 (24%)
Query: 159 LQLRHGLHLSTPPLQCHHHLH----TSCIRHKLIQFKLADIGEGIREVNIKEWNGNVTEG 214
L+ ++ PP + H T+ ++ +++QFKL+DIGEGIREV +KEW V EG
Sbjct: 32 LKPKYVCFFGYPPFKYSHPYQWLKTTAALQGQIVQFKLSDIGEGIREVTVKEWY--VKEG 89
Query: 215 ARINEFDVVCEVESDKASVTITSRYKGTVRKVYYGEGDVALVGKPLLDIEVEDEGVAAEE 274
+++FD +CEV+SDKASVTITSRY G ++K+YY D A VGKPL+DIE E + E
Sbjct: 90 DTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLDDTAYVGKPLVDIET--EALKDSE 147
Query: 275 ADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPNKVNREPIAHKPDVTPDLSRDSAVSHLN 334
D ++ TP +S D H +
Sbjct: 148 EDVVE-----------------------------------------TPAVSHD---EHTH 163
Query: 335 QPVNLNKNKWKILATPSVRRMIKHYEIDTKELRGTGKQGRVLKEDIITYM 384
Q + K LATP+VRR+ I E+ G+GK GR+LKEDI+ Y+
Sbjct: 164 QEIKGQKT----LATPAVRRLAMENNIKLSEVIGSGKDGRILKEDILNYL 209
>sp|Q23571|ODB2_CAEEL Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex, mitochondrial
OS=Caenorhabditis elegans GN=ZK669.4 PE=3 SV=1
Length = 448
Score = 302 bits (773), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 179/480 (37%), Positives = 261/480 (54%), Gaps = 74/480 (15%)
Query: 432 LQCHHHLHTSCIRH-KLIQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDK 490
+ + HLHTS + ++QF L+DIGEGI EV +KEW V EG I++FD VCEV+SDK
Sbjct: 14 FKLNKHLHTSKVAFMPVVQFKLSDIGEGIAEVQVKEWY--VKEGDTISQFDKVCEVQSDK 71
Query: 491 ASVTITSRYKGTVRKVYYGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAA------P 544
A+VTI+ RY G V+K+Y+ +A VG+ L+D+E+E EE + ++AA P
Sbjct: 72 AAVTISCRYDGIVKKLYHEVDGMARVGQALIDVEIEGN---VEEPEQPKKEAASSSPEAP 128
Query: 545 GVSEVNTPDTSDQPNETLHKDP-------NKIDTKELRGTGKQGRVLKEDIITYMNS-PS 596
S P+++ + L NKI E+RGTGK GRVLKED++ ++ P+
Sbjct: 129 KSSAPKAPESAHSEGKVLATPAVRRIAIENKIKLAEVRGTGKDGRVLKEDVLKFLGQVPA 188
Query: 597 DETNPAHTAHVREASNVISIRGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKKEDII 656
D H ++N+ T PS + E + KED+
Sbjct: 189 D--------HTSGSTNI------------RTTHQAPQPSSKSYEPL---------KEDV- 218
Query: 657 TYMNSPSDETNPAHTAHVREASNVIPIRGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRD 716
+PIRGY + M K+MTEA IP +E++ L
Sbjct: 219 -----------------------AVPIRGYTRAMVKTMTEALKIPHFGYNDEINVDSLVK 255
Query: 717 VKNQVSALYQEKFRLKLTYMPFFIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAI 776
+ ++ +E+ +KL+YMPFFIKA SL + E+P LN++ D EN++ HNI +A+
Sbjct: 256 YRAELKEFAKER-HIKLSYMPFFIKAASLALLEYPSLNSTTDEKMENVIHKASHNICLAM 314
Query: 777 DTKHGLVVPNIKSVNKLCLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTL 836
DT GLVVPNIK+ + + +I +EL R+ + ++ D+ GT S+SN+GN+GGT
Sbjct: 315 DTPGGLVVPNIKNCEQRSIFEIAQELNRLLEAGKKQQIKREDLIDGTFSLSNIGNIGGTY 374
Query: 837 VQPIIVPGQVCIVAFGKIQLLPRFDAEMRIVAKCILNVTWAADHRVVDGATVARAATLWK 896
P++ P QV I A GKI+ LPRFD ++ I+ V+W ADHRVVDGAT+AR + WK
Sbjct: 375 ASPVVFPPQVAIGAIGKIEKLPRFDKHDNVIPVNIMKVSWCADHRVVDGATMARFSNRWK 434
Score = 146 bits (369), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 101/154 (65%)
Query: 892 ATLWKSLENILVNPDHNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKV 951
+T + +EN++ HNI +A+DT GLVVPNIK+ + S+ +I +EL R+ + ++
Sbjct: 293 STTDEKMENVIHKASHNICLAMDTPGGLVVPNIKNCEQRSIFEIAQELNRLLEAGKKQQI 352
Query: 952 LPRDIQGGTISMSNVGNVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNV 1011
D+ GT S+SN+GN+GGT P++ P QV I A GKI+ LPRFD V+ I+ V
Sbjct: 353 KREDLIDGTFSLSNIGNIGGTYASPVVFPPQVAIGAIGKIEKLPRFDKHDNVIPVNIMKV 412
Query: 1012 TWAADHRVVDGATVARAATLWKSLVENPALLLTQ 1045
+W ADHRVVDGAT+AR + WK +E+P+ +L Q
Sbjct: 413 SWCADHRVVDGATMARFSNRWKFYLEHPSAMLAQ 446
Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 137/267 (51%), Gaps = 60/267 (22%)
Query: 172 LQCHHHLHTSCIRH-KLIQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDK 230
+ + HLHTS + ++QFKL+DIGEGI EV +KEW V EG I++FD VCEV+SDK
Sbjct: 14 FKLNKHLHTSKVAFMPVVQFKLSDIGEGIAEVQVKEWY--VKEGDTISQFDKVCEVQSDK 71
Query: 231 ASVTITSRYKGTVRKVYYGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVN 290
A+VTI+ RY G V+K+Y+ +A VG+ L+D+E+E EE + ++AA E
Sbjct: 72 AAVTISCRYDGIVKKLYHEVDGMARVGQALIDVEIEGN---VEEPEQPKKEAASSSPEA- 127
Query: 291 TPDTSDQPNETLHKEPNKVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATP 350
P + K P + E K+LATP
Sbjct: 128 -------PKSSAPKAPESAHSE-------------------------------GKVLATP 149
Query: 351 SVRRMIKHYEIDTKELRGTGKQGRVLKEDIITYMNS-PID----ETNLAHTAHVREASN- 404
+VRR+ +I E+RGTGK GRVLKED++ ++ P D TN+ T + S+
Sbjct: 150 AVRRIAIENKIKLAEVRGTGKDGRVLKEDVLKFLGQVPADHTSGSTNIRTTHQAPQPSSK 209
Query: 405 ---------VISIRGYVKGMFKSMTEA 422
+ IRGY + M K+MTEA
Sbjct: 210 SYEPLKEDVAVPIRGYTRAMVKTMTEA 236
>sp|Q8NX76|ODP2_STAAW Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
MW2) GN=pdhC PE=3 SV=1
Length = 430
Score = 163 bits (412), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 216/481 (44%), Gaps = 81/481 (16%)
Query: 448 IQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 507
+F L DIGEGI E I +W V G I E DV+ EV++DK+ V I S GTV +V
Sbjct: 3 FEFRLPDIGEGIHEGEIVKWF--VKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVM 60
Query: 508 YGEGDVALVGKPLLDIEVED----------------EGVAAEEADSLDRKAAPGVSEVNT 551
EG VA+VG ++ I+ D E A EEA + A EV+
Sbjct: 61 VEEGTVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDE 120
Query: 552 PDT-SDQPNETLHKDPNKIDTKELRGTGKQGRVLKEDIITYMN--SPSDETNPAHTAHVR 608
T P+ + ++ K + G+GK GR+ KED+ Y+N +P+ A +A
Sbjct: 121 NRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAASATSE 180
Query: 609 EASNVISIRGYV--KGMFKSMTEANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSPSDET 666
E + + V +G F TE IP++R
Sbjct: 181 EVAETPAAPAAVTLEGDFPETTE--KIPAMR----------------------------- 209
Query: 667 NPAHTAHVREASNVIPIRGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKNQVSALYQ 726
R K M S +T P + L +E+D L D + + +
Sbjct: 210 -----------------RAIAKAMVNSK---HTAPHVTLMDEIDVQALWDHRKKFKEIAA 249
Query: 727 EKFRLKLTYMPFFIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPN 786
E+ KLT++P+ +KAL + ++P LN S + I+ NI IA DT GL+VP
Sbjct: 250 EQ-GTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTDRGLLVPV 308
Query: 787 IKSVNKLCLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQV 846
+K ++ + I+ E+ + + +GK+ +++G T ++SN+G+ GG P+I +V
Sbjct: 309 VKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPVINHPEV 368
Query: 847 CIVAFGKIQLLPRF-DAEMRIVAKCILNVTWAADHRVVDGATVARAATLWKSLENILVNP 905
I+ G+I P D E IVA +L ++ + DHR +DGAT A K L N NP
Sbjct: 369 AILGIGRIAQKPIVKDGE--IVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLN---NP 423
Query: 906 D 906
+
Sbjct: 424 E 424
Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
NI IA DT GL+VP +K ++ S+ I+ E+ + + +GK+ +++G T ++SN+G
Sbjct: 293 NIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIG 352
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRF-DAEMRVVAKCILNVTWAADHRVVDGATVA 1026
+ GG P+I +V I+ G+I P D E +VA +L ++ + DHR +DGAT
Sbjct: 353 SAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGE--IVAAPVLALSLSFDHRQIDGATGQ 410
Query: 1027 RAATLWKSLVENPALLLTQ 1045
A K L+ NP LLL +
Sbjct: 411 NAMNHIKRLLNNPELLLME 429
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 188 IQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 247
+F+L DIGEGI E I +W V G I E DV+ EV++DK+ V I S GTV +V
Sbjct: 3 FEFRLPDIGEGIHEGEIVKWF--VKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVM 60
Query: 248 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPN 307
EG VA+VG ++ I+ D A+ + K D E KE
Sbjct: 61 VEEGTVAVVGDVIVKIDAPD-------AEDMQFKGH---------DDDSSSKEEPAKEEA 104
Query: 308 KVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELR 367
+ P+A Q +++N+ + A PSVR+ + ++ K +
Sbjct: 105 PAEQAPVA------------------TQTEEVDENR-TVKAMPSVRKYAREKGVNIKAVS 145
Query: 368 GTGKQGRVLKEDIITYMN--SPIDETNLAHTAHVREASNVISIRGYV--KGMFKSMTE 421
G+GK GR+ KED+ Y+N +P A +A E + + V +G F TE
Sbjct: 146 GSGKNGRITKEDVDAYLNGGAPTASNESAASATSEEVAETPAAPAAVTLEGDFPETTE 203
>sp|Q6GAB9|ODP2_STAAS Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
MSSA476) GN=pdhC PE=3 SV=1
Length = 430
Score = 163 bits (412), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 216/481 (44%), Gaps = 81/481 (16%)
Query: 448 IQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 507
+F L DIGEGI E I +W V G I E DV+ EV++DK+ V I S GTV +V
Sbjct: 3 FEFRLPDIGEGIHEGEIVKWF--VKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVM 60
Query: 508 YGEGDVALVGKPLLDIEVED----------------EGVAAEEADSLDRKAAPGVSEVNT 551
EG VA+VG ++ I+ D E A EEA + A EV+
Sbjct: 61 VEEGTVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDE 120
Query: 552 PDT-SDQPNETLHKDPNKIDTKELRGTGKQGRVLKEDIITYMN--SPSDETNPAHTAHVR 608
T P+ + ++ K + G+GK GR+ KED+ Y+N +P+ A +A
Sbjct: 121 NRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAASATSE 180
Query: 609 EASNVISIRGYV--KGMFKSMTEANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSPSDET 666
E + + V +G F TE IP++R
Sbjct: 181 EVAETPAAPAAVTLEGDFPETTE--KIPAMR----------------------------- 209
Query: 667 NPAHTAHVREASNVIPIRGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKNQVSALYQ 726
R K M S +T P + L +E+D L D + + +
Sbjct: 210 -----------------RAIAKAMVNSK---HTAPHVTLMDEIDVQALWDHRKKFKEIAA 249
Query: 727 EKFRLKLTYMPFFIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPN 786
E+ KLT++P+ +KAL + ++P LN S + I+ NI IA DT GL+VP
Sbjct: 250 EQ-GTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTDRGLLVPV 308
Query: 787 IKSVNKLCLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQV 846
+K ++ + I+ E+ + + +GK+ +++G T ++SN+G+ GG P+I +V
Sbjct: 309 VKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPVINHPEV 368
Query: 847 CIVAFGKIQLLPRF-DAEMRIVAKCILNVTWAADHRVVDGATVARAATLWKSLENILVNP 905
I+ G+I P D E IVA +L ++ + DHR +DGAT A K L N NP
Sbjct: 369 AILGIGRIAQKPIVKDGE--IVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLN---NP 423
Query: 906 D 906
+
Sbjct: 424 E 424
Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
NI IA DT GL+VP +K ++ S+ I+ E+ + + +GK+ +++G T ++SN+G
Sbjct: 293 NIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIG 352
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRF-DAEMRVVAKCILNVTWAADHRVVDGATVA 1026
+ GG P+I +V I+ G+I P D E +VA +L ++ + DHR +DGAT
Sbjct: 353 SAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGE--IVAAPVLALSLSFDHRQIDGATGQ 410
Query: 1027 RAATLWKSLVENPALLLTQ 1045
A K L+ NP LLL +
Sbjct: 411 NAMNHIKRLLNNPELLLME 429
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 188 IQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 247
+F+L DIGEGI E I +W V G I E DV+ EV++DK+ V I S GTV +V
Sbjct: 3 FEFRLPDIGEGIHEGEIVKWF--VKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVM 60
Query: 248 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPN 307
EG VA+VG ++ I+ D A+ + K D E KE
Sbjct: 61 VEEGTVAVVGDVIVKIDAPD-------AEDMQFKGH---------DDDSSSKEEPAKEEA 104
Query: 308 KVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELR 367
+ P+A Q +++N+ + A PSVR+ + ++ K +
Sbjct: 105 PAEQAPVA------------------TQTEEVDENR-TVKAMPSVRKYAREKGVNIKAVS 145
Query: 368 GTGKQGRVLKEDIITYMN--SPIDETNLAHTAHVREASNVISIRGYV--KGMFKSMTE 421
G+GK GR+ KED+ Y+N +P A +A E + + V +G F TE
Sbjct: 146 GSGKNGRITKEDVDAYLNGGAPTASNESAASATSEEVAETPAAPAAVTLEGDFPETTE 203
>sp|Q5HGY9|ODP2_STAAC Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
COL) GN=pdhC PE=3 SV=1
Length = 430
Score = 163 bits (412), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 216/481 (44%), Gaps = 81/481 (16%)
Query: 448 IQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 507
+F L DIGEGI E I +W V G I E DV+ EV++DK+ V I S GTV +V
Sbjct: 3 FEFRLPDIGEGIHEGEIVKWF--VKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVM 60
Query: 508 YGEGDVALVGKPLLDIEVED----------------EGVAAEEADSLDRKAAPGVSEVNT 551
EG VA+VG ++ I+ D E A EEA + A EV+
Sbjct: 61 VEEGTVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDE 120
Query: 552 PDT-SDQPNETLHKDPNKIDTKELRGTGKQGRVLKEDIITYMN--SPSDETNPAHTAHVR 608
T P+ + ++ K + G+GK GR+ KED+ Y+N +P+ A +A
Sbjct: 121 NRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAASATSE 180
Query: 609 EASNVISIRGYV--KGMFKSMTEANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSPSDET 666
E + + V +G F TE IP++R
Sbjct: 181 EVAETPAAPAAVTLEGDFPETTE--KIPAMR----------------------------- 209
Query: 667 NPAHTAHVREASNVIPIRGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKNQVSALYQ 726
R K M S +T P + L +E+D L D + + +
Sbjct: 210 -----------------RAIAKAMVNSK---HTAPHVTLMDEIDVQALWDHRKKFKEIAA 249
Query: 727 EKFRLKLTYMPFFIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPN 786
E+ KLT++P+ +KAL + ++P LN S + I+ NI IA DT GL+VP
Sbjct: 250 EQ-GTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTDRGLLVPV 308
Query: 787 IKSVNKLCLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQV 846
+K ++ + I+ E+ + + +GK+ +++G T ++SN+G+ GG P+I +V
Sbjct: 309 VKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPVINHPEV 368
Query: 847 CIVAFGKIQLLPRF-DAEMRIVAKCILNVTWAADHRVVDGATVARAATLWKSLENILVNP 905
I+ G+I P D E IVA +L ++ + DHR +DGAT A K L N NP
Sbjct: 369 AILGIGRIAQKPIVKDGE--IVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLN---NP 423
Query: 906 D 906
+
Sbjct: 424 E 424
Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
NI IA DT GL+VP +K ++ S+ I+ E+ + + +GK+ +++G T ++SN+G
Sbjct: 293 NIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIG 352
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRF-DAEMRVVAKCILNVTWAADHRVVDGATVA 1026
+ GG P+I +V I+ G+I P D E +VA +L ++ + DHR +DGAT
Sbjct: 353 SAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGE--IVAAPVLALSLSFDHRQIDGATGQ 410
Query: 1027 RAATLWKSLVENPALLLTQ 1045
A K L+ NP LLL +
Sbjct: 411 NAMNHIKRLLNNPELLLME 429
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 188 IQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 247
+F+L DIGEGI E I +W V G I E DV+ EV++DK+ V I S GTV +V
Sbjct: 3 FEFRLPDIGEGIHEGEIVKWF--VKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVM 60
Query: 248 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPN 307
EG VA+VG ++ I+ D A+ + K D E KE
Sbjct: 61 VEEGTVAVVGDVIVKIDAPD-------AEDMQFKGH---------DDDSSSKEEPAKEEA 104
Query: 308 KVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELR 367
+ P+A Q +++N+ + A PSVR+ + ++ K +
Sbjct: 105 PAEQAPVA------------------TQTEEVDENR-TVKAMPSVRKYAREKGVNIKAVS 145
Query: 368 GTGKQGRVLKEDIITYMN--SPIDETNLAHTAHVREASNVISIRGYV--KGMFKSMTE 421
G+GK GR+ KED+ Y+N +P A +A E + + V +G F TE
Sbjct: 146 GSGKNGRITKEDVDAYLNGGAPTASNESAASATSEEVAETPAAPAAVTLEGDFPETTE 203
>sp|P65636|ODP2_STAAN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
N315) GN=pdhC PE=1 SV=1
Length = 430
Score = 162 bits (411), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 216/481 (44%), Gaps = 81/481 (16%)
Query: 448 IQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 507
+F L DIGEGI E I +W V G I E DV+ EV++DK+ V I S GTV +V
Sbjct: 3 FEFRLPDIGEGIHEGEIVKWF--VKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVM 60
Query: 508 YGEGDVALVGKPLLDIEVED----------------EGVAAEEADSLDRKAAPGVSEVNT 551
EG VA+VG ++ I+ D E A EEA + A EV+
Sbjct: 61 VEEGTVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDE 120
Query: 552 PDT-SDQPNETLHKDPNKIDTKELRGTGKQGRVLKEDIITYMN--SPSDETNPAHTAHVR 608
T P+ + ++ K + G+GK GR+ KED+ Y+N +P+ A +A
Sbjct: 121 NRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAASATSE 180
Query: 609 EASNVISIRGYV--KGMFKSMTEANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSPSDET 666
E + + V +G F TE IP++R
Sbjct: 181 EVAETPAAPAAVSLEGDFPETTE--KIPAMR----------------------------- 209
Query: 667 NPAHTAHVREASNVIPIRGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKNQVSALYQ 726
R K M S +T P + L +E+D L D + + +
Sbjct: 210 -----------------RAIAKAMVNSK---HTAPHVTLMDEIDVQALWDHRKKFKEIAA 249
Query: 727 EKFRLKLTYMPFFIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPN 786
E+ KLT++P+ +KAL + ++P LN S + I+ NI IA DT GL+VP
Sbjct: 250 EQ-GTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTDRGLLVPV 308
Query: 787 IKSVNKLCLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQV 846
+K ++ + I+ E+ + + +GK+ +++G T ++SN+G+ GG P+I +V
Sbjct: 309 VKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPVINHPEV 368
Query: 847 CIVAFGKIQLLPRF-DAEMRIVAKCILNVTWAADHRVVDGATVARAATLWKSLENILVNP 905
I+ G+I P D E IVA +L ++ + DHR +DGAT A K L N NP
Sbjct: 369 AILGIGRIAQKPIVKDGE--IVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLN---NP 423
Query: 906 D 906
+
Sbjct: 424 E 424
Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
NI IA DT GL+VP +K ++ S+ I+ E+ + + +GK+ +++G T ++SN+G
Sbjct: 293 NIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIG 352
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRF-DAEMRVVAKCILNVTWAADHRVVDGATVA 1026
+ GG P+I +V I+ G+I P D E +VA +L ++ + DHR +DGAT
Sbjct: 353 SAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGE--IVAAPVLALSLSFDHRQIDGATGQ 410
Query: 1027 RAATLWKSLVENPALLLTQ 1045
A K L+ NP LLL +
Sbjct: 411 NAMNHIKRLLNNPELLLME 429
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 188 IQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 247
+F+L DIGEGI E I +W V G I E DV+ EV++DK+ V I S GTV +V
Sbjct: 3 FEFRLPDIGEGIHEGEIVKWF--VKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVM 60
Query: 248 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPN 307
EG VA+VG ++ I+ D A+ + K D E KE
Sbjct: 61 VEEGTVAVVGDVIVKIDAPD-------AEDMQFKGH---------DDDSSSKEEPAKEEA 104
Query: 308 KVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELR 367
+ P+A Q +++N+ + A PSVR+ + ++ K +
Sbjct: 105 PAEQAPVA------------------TQTEEVDENR-TVKAMPSVRKYAREKGVNIKAVS 145
Query: 368 GTGKQGRVLKEDIITYMN--SPIDETNLAHTAHVREASNVISIRGYV--KGMFKSMTE 421
G+GK GR+ KED+ Y+N +P A +A E + + V +G F TE
Sbjct: 146 GSGKNGRITKEDVDAYLNGGAPTASNESAASATSEEVAETPAAPAAVSLEGDFPETTE 203
>sp|P65635|ODP2_STAAM Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=pdhC PE=1 SV=1
Length = 430
Score = 162 bits (411), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 216/481 (44%), Gaps = 81/481 (16%)
Query: 448 IQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 507
+F L DIGEGI E I +W V G I E DV+ EV++DK+ V I S GTV +V
Sbjct: 3 FEFRLPDIGEGIHEGEIVKWF--VKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVM 60
Query: 508 YGEGDVALVGKPLLDIEVED----------------EGVAAEEADSLDRKAAPGVSEVNT 551
EG VA+VG ++ I+ D E A EEA + A EV+
Sbjct: 61 VEEGTVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDE 120
Query: 552 PDT-SDQPNETLHKDPNKIDTKELRGTGKQGRVLKEDIITYMN--SPSDETNPAHTAHVR 608
T P+ + ++ K + G+GK GR+ KED+ Y+N +P+ A +A
Sbjct: 121 NRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAASATSE 180
Query: 609 EASNVISIRGYV--KGMFKSMTEANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSPSDET 666
E + + V +G F TE IP++R
Sbjct: 181 EVAETPAAPAAVSLEGDFPETTE--KIPAMR----------------------------- 209
Query: 667 NPAHTAHVREASNVIPIRGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKNQVSALYQ 726
R K M S +T P + L +E+D L D + + +
Sbjct: 210 -----------------RAIAKAMVNSK---HTAPHVTLMDEIDVQALWDHRKKFKEIAA 249
Query: 727 EKFRLKLTYMPFFIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPN 786
E+ KLT++P+ +KAL + ++P LN S + I+ NI IA DT GL+VP
Sbjct: 250 EQ-GTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTDRGLLVPV 308
Query: 787 IKSVNKLCLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQV 846
+K ++ + I+ E+ + + +GK+ +++G T ++SN+G+ GG P+I +V
Sbjct: 309 VKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPVINHPEV 368
Query: 847 CIVAFGKIQLLPRF-DAEMRIVAKCILNVTWAADHRVVDGATVARAATLWKSLENILVNP 905
I+ G+I P D E IVA +L ++ + DHR +DGAT A K L N NP
Sbjct: 369 AILGIGRIAQKPIVKDGE--IVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLN---NP 423
Query: 906 D 906
+
Sbjct: 424 E 424
Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
NI IA DT GL+VP +K ++ S+ I+ E+ + + +GK+ +++G T ++SN+G
Sbjct: 293 NIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIG 352
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRF-DAEMRVVAKCILNVTWAADHRVVDGATVA 1026
+ GG P+I +V I+ G+I P D E +VA +L ++ + DHR +DGAT
Sbjct: 353 SAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGE--IVAAPVLALSLSFDHRQIDGATGQ 410
Query: 1027 RAATLWKSLVENPALLLTQ 1045
A K L+ NP LLL +
Sbjct: 411 NAMNHIKRLLNNPELLLME 429
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 188 IQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 247
+F+L DIGEGI E I +W V G I E DV+ EV++DK+ V I S GTV +V
Sbjct: 3 FEFRLPDIGEGIHEGEIVKWF--VKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVM 60
Query: 248 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPN 307
EG VA+VG ++ I+ D A+ + K D E KE
Sbjct: 61 VEEGTVAVVGDVIVKIDAPD-------AEDMQFKGH---------DDDSSSKEEPAKEEA 104
Query: 308 KVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELR 367
+ P+A Q +++N+ + A PSVR+ + ++ K +
Sbjct: 105 PAEQAPVA------------------TQTEEVDENR-TVKAMPSVRKYAREKGVNIKAVS 145
Query: 368 GTGKQGRVLKEDIITYMN--SPIDETNLAHTAHVREASNVISIRGYV--KGMFKSMTE 421
G+GK GR+ KED+ Y+N +P A +A E + + V +G F TE
Sbjct: 146 GSGKNGRITKEDVDAYLNGGAPTASNESAASATSEEVAETPAAPAAVSLEGDFPETTE 203
>sp|Q5HQ74|ODP2_STAEQ Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=pdhC PE=3 SV=1
Length = 433
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 214/485 (44%), Gaps = 86/485 (17%)
Query: 448 IQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 507
+F L DIGEGI E I +W + G I E DV+ EV++DK+ V I S GTV +V
Sbjct: 3 FEFRLPDIGEGIHEGEIVKWF--IKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVL 60
Query: 508 YGEGDVALVGKPLLDI----------------------EVEDEGVAAEEADSLDRKAAPG 545
EG VA+VG ++ I E E E EEA S +
Sbjct: 61 VDEGTVAVVGDVIVKIDAPDAEEMQFKGHGDDEDSKKEEKEQESPVQEEASSTQSQEKTE 120
Query: 546 VSEVNTPDTSDQPNETLHKDPNKIDTKELRGTGKQGRVLKEDIITYMNSPSDETNP---- 601
V E T P+ + N ++ K + G+GK GR+ KEDI Y+N S E
Sbjct: 121 VDESKT--VKAMPSVRKYARENGVNIKAVNGSGKNGRITKEDIDAYLNGGSSEEGSNTSA 178
Query: 602 AHTAHVREASNVISIRGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKKEDIITYMNS 661
A + + N + + +G F TE IP++R
Sbjct: 179 ASESTSSDVVNASATQALPEGDFPETTE--KIPAMR------------------------ 212
Query: 662 PSDETNPAHTAHVREASNVIPIRGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKNQV 721
+ K M S +T P + L +E+D +L D + +
Sbjct: 213 ----------------------KAIAKAMVNS---KHTAPHVTLMDEIDVQELWDHRKKF 247
Query: 722 SALYQEKFRLKLTYMPFFIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHG 781
+ E+ KLT++P+ +KAL + ++P LN S + ++ NI IA DT G
Sbjct: 248 KEIAAEQ-GTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEVVHKHYWNIGIAADTDKG 306
Query: 782 LVVPNIKSVNKLCLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPII 841
L+VP +K ++ + +I+ E+ + + +GK+ +++G T ++SN+G+ GG P+I
Sbjct: 307 LLVPVVKHADRKSIFEISDEINELAVKARDGKLTSEEMKGATCTISNIGSAGGQWFTPVI 366
Query: 842 VPGQVCIVAFGKIQLLPRFDAEMRIVAKCILNVTWAADHRVVDGATVARAATLWKSLENI 901
+V I+ G+I P + IVA +L ++ + DHR +DGAT A K L N
Sbjct: 367 NHPEVAILGIGRIAQKPIV-KDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLN- 424
Query: 902 LVNPD 906
NP+
Sbjct: 425 --NPE 427
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 80/138 (57%), Gaps = 1/138 (0%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
NI IA DT GL+VP +K ++ S+ +I+ E+ + + +GK+ +++G T ++SN+G
Sbjct: 296 NIGIAADTDKGLLVPVVKHADRKSIFEISDEINELAVKARDGKLTSEEMKGATCTISNIG 355
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHRVVDGATVAR 1027
+ GG P+I +V I+ G+I P + +VA +L ++ + DHR +DGAT
Sbjct: 356 SAGGQWFTPVINHPEVAILGIGRIAQKPIV-KDGEIVAAPVLALSLSFDHRQIDGATGQN 414
Query: 1028 AATLWKSLVENPALLLTQ 1045
A K L+ NP LLL +
Sbjct: 415 AMNHIKRLLNNPELLLME 432
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 188 IQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 247
+F+L DIGEGI E I +W + G I E DV+ EV++DK+ V I S GTV +V
Sbjct: 3 FEFRLPDIGEGIHEGEIVKWF--IKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVL 60
Query: 248 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPN 307
EG VA+VG ++ I+ AP E+ D + K+
Sbjct: 61 VDEGTVAVVGDVIVKID------------------APDAEEMQFKGHGDDED---SKKEE 99
Query: 308 KVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELR 367
K P+ +++ + + ++++K + A PSVR+ + ++ K +
Sbjct: 100 KEQESPV----------QEEASSTQSQEKTEVDESK-TVKAMPSVRKYARENGVNIKAVN 148
Query: 368 GTGKQGRVLKEDIITYMN 385
G+GK GR+ KEDI Y+N
Sbjct: 149 GSGKNGRITKEDIDAYLN 166
>sp|Q59821|ODP2_STAAU Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus GN=pdhC
PE=3 SV=1
Length = 430
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 216/481 (44%), Gaps = 81/481 (16%)
Query: 448 IQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 507
+F L DIGEGI E I +W V G I E DV+ EV++DK+ V I S GTV +V
Sbjct: 3 FEFRLPDIGEGIHEGEIVKWF--VKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVM 60
Query: 508 YGEGDVALVGKPLLDIEVED----------------EGVAAEEADSLDRKAAPGVSEVNT 551
EG VA+VG ++ I+ D E A EEA + A EV+
Sbjct: 61 VEEGTVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDE 120
Query: 552 PDT-SDQPNETLHKDPNKIDTKELRGTGKQGRVLKEDIITYMN--SPSDETNPAHTAHVR 608
T P+ + ++ K + G+GK GR+ KED+ Y+N +P+ A +A
Sbjct: 121 NRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESADSATNE 180
Query: 609 EASNVISIRGYV--KGMFKSMTEANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSPSDET 666
E + + V +G F TE IP++R
Sbjct: 181 EVAETPAAPAAVSLEGDFPETTE--KIPAMR----------------------------- 209
Query: 667 NPAHTAHVREASNVIPIRGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKNQVSALYQ 726
R K M S +T P + L +E+D L D + + +
Sbjct: 210 -----------------RAIAKAMVNSK---HTAPHVTLMDEIDVQALWDHRKKFKEIAA 249
Query: 727 EKFRLKLTYMPFFIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPN 786
E+ KLT++P+ +KAL + ++P LN S + I+ NI IA DT GL+VP
Sbjct: 250 EQ-GTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTDRGLLVPV 308
Query: 787 IKSVNKLCLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQV 846
+K ++ + I+ E+ + + +GK+ +++G T ++SN+G+ GG P+I +V
Sbjct: 309 VKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPVINHPEV 368
Query: 847 CIVAFGKIQLLPRF-DAEMRIVAKCILNVTWAADHRVVDGATVARAATLWKSLENILVNP 905
I+ G+I P D E IVA +L ++ + DHR +DGAT A K L N NP
Sbjct: 369 AILGIGRIAQKPIVKDGE--IVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLN---NP 423
Query: 906 D 906
+
Sbjct: 424 E 424
Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
NI IA DT GL+VP +K ++ S+ I+ E+ + + +GK+ +++G T ++SN+G
Sbjct: 293 NIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIG 352
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRF-DAEMRVVAKCILNVTWAADHRVVDGATVA 1026
+ GG P+I +V I+ G+I P D E +VA +L ++ + DHR +DGAT
Sbjct: 353 SAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGE--IVAAPVLALSLSFDHRQIDGATGQ 410
Query: 1027 RAATLWKSLVENPALLLTQ 1045
A K L+ NP LLL +
Sbjct: 411 NAMNHIKRLLNNPELLLME 429
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 188 IQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 247
+F+L DIGEGI E I +W V G I E DV+ EV++DK+ V I S GTV +V
Sbjct: 3 FEFRLPDIGEGIHEGEIVKWF--VKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVM 60
Query: 248 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPN 307
EG VA+VG ++ I+ D A+ + K D E KE
Sbjct: 61 VEEGTVAVVGDVIVKIDAPD-------AEDMQFKGH---------DDDSSSKEEPAKEEA 104
Query: 308 KVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELR 367
+ P+A Q +++N+ + A PSVR+ + ++ K +
Sbjct: 105 PAEQAPVA------------------TQTEEVDENR-TVKAMPSVRKYAREKGVNIKAVS 145
Query: 368 GTGKQGRVLKEDIITYMN--SPIDETNLAHTAHVREASNVISIRGYV--KGMFKSMTE 421
G+GK GR+ KED+ Y+N +P A +A E + + V +G F TE
Sbjct: 146 GSGKNGRITKEDVDAYLNGGAPTASNESADSATNEEVAETPAAPAAVSLEGDFPETTE 203
>sp|Q6GHZ0|ODP2_STAAR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
MRSA252) GN=pdhC PE=3 SV=1
Length = 430
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 216/481 (44%), Gaps = 81/481 (16%)
Query: 448 IQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 507
+F L DIGEGI E I +W V G I E DV+ EV++DK+ V I S GTV +V
Sbjct: 3 FEFRLPDIGEGIHEGEIVKWF--VKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVM 60
Query: 508 YGEGDVALVGKPLLDIEVED----------------EGVAAEEADSLDRKAAPGVSEVNT 551
EG VA+VG ++ I+ D E A EEA + A EV+
Sbjct: 61 VEEGTVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDE 120
Query: 552 PDT-SDQPNETLHKDPNKIDTKELRGTGKQGRVLKEDIITYMN--SPSDETNPAHTAHVR 608
T P+ + ++ K + G+GK GR+ KED+ Y+N +P+ A +A
Sbjct: 121 NRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAASATNE 180
Query: 609 EASNVISIRGYV--KGMFKSMTEANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSPSDET 666
E + + V +G F TE IP++R
Sbjct: 181 EVAETPAAPAAVSLEGDFPETTE--KIPAMR----------------------------- 209
Query: 667 NPAHTAHVREASNVIPIRGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKNQVSALYQ 726
R K M S +T P + L +E+D L D + + +
Sbjct: 210 -----------------RAIAKAMVNSK---HTAPHVTLMDEIDVQALWDHRKKFKEIAA 249
Query: 727 EKFRLKLTYMPFFIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPN 786
E+ KLT++P+ +KAL + ++P LN S + I+ NI IA DT GL+VP
Sbjct: 250 EQ-GTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTDRGLLVPV 308
Query: 787 IKSVNKLCLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQV 846
+K ++ + I+ E+ + + +GK+ +++G T ++SN+G+ GG P+I +V
Sbjct: 309 VKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPVINHPEV 368
Query: 847 CIVAFGKIQLLPRF-DAEMRIVAKCILNVTWAADHRVVDGATVARAATLWKSLENILVNP 905
I+ G+I P D E IVA +L ++ + DHR +DGAT A K L N NP
Sbjct: 369 AILGIGRIAQKPIVKDGE--IVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLN---NP 423
Query: 906 D 906
+
Sbjct: 424 E 424
Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
NI IA DT GL+VP +K ++ S+ I+ E+ + + +GK+ +++G T ++SN+G
Sbjct: 293 NIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIG 352
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRF-DAEMRVVAKCILNVTWAADHRVVDGATVA 1026
+ GG P+I +V I+ G+I P D E +VA +L ++ + DHR +DGAT
Sbjct: 353 SAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGE--IVAAPVLALSLSFDHRQIDGATGQ 410
Query: 1027 RAATLWKSLVENPALLLTQ 1045
A K L+ NP LLL +
Sbjct: 411 NAMNHIKRLLNNPELLLME 429
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 188 IQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 247
+F+L DIGEGI E I +W V G I E DV+ EV++DK+ V I S GTV +V
Sbjct: 3 FEFRLPDIGEGIHEGEIVKWF--VKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVM 60
Query: 248 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPN 307
EG VA+VG ++ I+ D A+ + K D E KE
Sbjct: 61 VEEGTVAVVGDVIVKIDAPD-------AEDMQFKGH---------DDDSSSKEEPAKEEA 104
Query: 308 KVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELR 367
+ P+A Q +++N+ + A PSVR+ + ++ K +
Sbjct: 105 PAEQAPVA------------------TQTEEVDENR-TVKAMPSVRKYAREKGVNIKAVS 145
Query: 368 GTGKQGRVLKEDIITYMN--SPIDETNLAHTAHVREASNVISIRGYV--KGMFKSMTE 421
G+GK GR+ KED+ Y+N +P A +A E + + V +G F TE
Sbjct: 146 GSGKNGRITKEDVDAYLNGGAPTASNESAASATNEEVAETPAAPAAVSLEGDFPETTE 203
>sp|P21883|ODP2_BACSU Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Bacillus subtilis (strain 168)
GN=pdhC PE=1 SV=2
Length = 442
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 227/483 (46%), Gaps = 82/483 (16%)
Query: 448 IQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 507
+F L DIGEGI E I +W V ++E DV+ EV++DKA V I S KG V ++
Sbjct: 3 FEFKLPDIGEGIHEGEIVKWF--VKPNDEVDEDDVLAEVQNDKAVVEIPSPVKGKVLELK 60
Query: 508 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKDPN 567
EG VA VG+ ++ + APG ++ + + D
Sbjct: 61 VEEGTVATVGQTIITFD------------------APGYEDLQFKGSDES-------DDA 95
Query: 568 KIDTKELRGTGKQGR-VLKEDIITYMNSPSDETNPAHT--AHVREASNVISIRGYVKGMF 624
K + +++ T + G+ V KE+ P+ T A V VI++
Sbjct: 96 KTEA-QVQSTAEAGQDVAKEE---QAQEPAKATGAGQQDQAEVDPNKRVIAM-------- 143
Query: 625 KSMTEANTIPSLRLTEEVDTTQLRDVK---------KEDIITYMNSPSDETNPAHTAHVR 675
PS+R +R V KEDI +++N + E P TA +
Sbjct: 144 ---------PSVRKYAREKGVDIRKVTGSGNNGRVVKEDIDSFVNGGAQEAAPQETAAPQ 194
Query: 676 EASNVI---------------PIRGYVKGMFKSMTEA-NTIPSLRLTEEVDTTQLRDVKN 719
E + + G K + K+M + +T P + L +EVD T L +
Sbjct: 195 ETAAKPAAAPAPEGEFPETREKMSGIRKAIAKAMVNSKHTAPHVTLMDEVDVTNLVAHRK 254
Query: 720 QVSALYQEKFRLKLTYMPFFIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTK 779
Q + ++ +KLTY+P+ +KAL+ + + P+LN SID + ++ NI IA DT+
Sbjct: 255 QFKQVAADQ-GIKLTYLPYVVKALTSALKKFPVLNTSIDDKTDEVIQKHYFNIGIAADTE 313
Query: 780 HGLVVPNIKSVNKLCLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQP 839
GL+VP +K+ ++ + +I+ E+ + + EGK+ P +++G + +++N+G+ GG P
Sbjct: 314 KGLLVPVVKNADRKSVFEISDEINGLATKAREGKLAPAEMKGASCTITNIGSAGGQWFTP 373
Query: 840 IIVPGQVCIVAFGKI--QLLPRFDAEMRIVAKCILNVTWAADHRVVDGATVARAATLWKS 897
+I +V I+ G+I + + R D E IVA +L ++ + DHR++DGAT A K
Sbjct: 374 VINHPEVAILGIGRIAEKAIVR-DGE--IVAAPVLALSLSFDHRMIDGATAQNALNHIKR 430
Query: 898 LEN 900
L N
Sbjct: 431 LLN 433
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 87/140 (62%), Gaps = 5/140 (3%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
NI IA DT+ GL+VP +K+ ++ S+ +I+ E+ + + EGK+ P +++G + +++N+G
Sbjct: 305 NIGIAADTEKGLLVPVVKNADRKSVFEISDEINGLATKAREGKLAPAEMKGASCTITNIG 364
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKI--QLLPRFDAEMRVVAKCILNVTWAADHRVVDGATV 1025
+ GG P+I +V I+ G+I + + R D E +VA +L ++ + DHR++DGAT
Sbjct: 365 SAGGQWFTPVINHPEVAILGIGRIAEKAIVR-DGE--IVAAPVLALSLSFDHRMIDGATA 421
Query: 1026 ARAATLWKSLVENPALLLTQ 1045
A K L+ +P L+L +
Sbjct: 422 QNALNHIKRLLNDPQLILME 441
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 21/234 (8%)
Query: 188 IQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 247
+FKL DIGEGI E I +W V ++E DV+ EV++DKA V I S KG V ++
Sbjct: 3 FEFKLPDIGEGIHEGEIVKWF--VKPNDEVDEDDVLAEVQNDKAVVEIPSPVKGKVLELK 60
Query: 248 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPN 307
EG VA VG+ ++ + A + L K G E + T Q T +
Sbjct: 61 VEEGTVATVGQTIITFD-------APGYEDLQFK---GSDESDDAKTEAQVQSTAEAGQD 110
Query: 308 KVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELR 367
V +E A +P ++ + +Q ++ NK +++A PSVR+ + +D +++
Sbjct: 111 -VAKEEQAQEP------AKATGAGQQDQ-AEVDPNK-RVIAMPSVRKYAREKGVDIRKVT 161
Query: 368 GTGKQGRVLKEDIITYMNSPIDETNLAHTAHVREASNVISIRGYVKGMFKSMTE 421
G+G GRV+KEDI +++N E TA +E + + +G F E
Sbjct: 162 GSGNNGRVVKEDIDSFVNGGAQEAAPQETAAPQETAAKPAAAPAPEGEFPETRE 215
>sp|Q8CT13|ODP2_STAES Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=pdhC PE=3 SV=1
Length = 433
Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/479 (27%), Positives = 217/479 (45%), Gaps = 74/479 (15%)
Query: 448 IQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 507
+F L DIGEGI E I +W + G I E DV+ EV++DK+ V I S GTV +V
Sbjct: 3 FEFRLPDIGEGIHEGEIVKWF--IKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVL 60
Query: 508 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKDPN 567
EG VA+VG ++ I+ D + D + E +P ++ + T ++
Sbjct: 61 VDEGTVAVVGDVIVKIDAPDAEEMQFKGHGDDEDSKKEEKEQESP-VQEEASSTQSQEKT 119
Query: 568 KIDTKELRGTGKQGRVLKEDIITYMNSPSDETNPAHTAHVREASNVISIRGYVKGMFKSM 627
++D S + + P+ + RE N ++I+ V G K+
Sbjct: 120 EVD----------------------ESKTVKAMPSVRKYARE--NGVNIKA-VNGSGKNG 154
Query: 628 TEANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSPSDE----TNPAHTAHVREASNVIPI 683
R+T KEDI Y+N S E T+ A + + N
Sbjct: 155 ---------RIT------------KEDIDAYLNGGSSEEGSNTSVASESTSSDVVNASAT 193
Query: 684 RGYVKGMFKSMTEA----------------NTIPSLRLTEEVDTTQLRDVKNQVSALYQE 727
+ +G F TE +T P + L +E+D +L D + + + E
Sbjct: 194 QALPEGDFPETTEKIPAMRKAIAKAMVNSKHTAPHVTLMDEIDVQELWDHRKKFKEIAAE 253
Query: 728 KFRLKLTYMPFFIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPNI 787
+ KLT++P+ +KAL + ++P LN S + ++ NI IA DT GL+VP +
Sbjct: 254 Q-GTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEVVHKHYWNIGIAADTDKGLLVPVV 312
Query: 788 KSVNKLCLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQVC 847
K ++ + +I+ E+ + + +GK+ +++G T ++SN+G+ GG P+I +V
Sbjct: 313 KHADRKSIFEISDEINELAVKARDGKLTSEEMKGATCTISNIGSAGGQWFTPVINHPEVA 372
Query: 848 IVAFGKIQLLPRFDAEMRIVAKCILNVTWAADHRVVDGATVARAATLWKSLENILVNPD 906
I+ G+I P + IVA +L ++ + DHR +DGAT A K L N NP+
Sbjct: 373 ILGIGRIAQKPIV-KDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLN---NPE 427
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 80/138 (57%), Gaps = 1/138 (0%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
NI IA DT GL+VP +K ++ S+ +I+ E+ + + +GK+ +++G T ++SN+G
Sbjct: 296 NIGIAADTDKGLLVPVVKHADRKSIFEISDEINELAVKARDGKLTSEEMKGATCTISNIG 355
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHRVVDGATVAR 1027
+ GG P+I +V I+ G+I P + +VA +L ++ + DHR +DGAT
Sbjct: 356 SAGGQWFTPVINHPEVAILGIGRIAQKPIV-KDGEIVAAPVLALSLSFDHRQIDGATGQN 414
Query: 1028 AATLWKSLVENPALLLTQ 1045
A K L+ NP LLL +
Sbjct: 415 AMNHIKRLLNNPELLLME 432
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 38/238 (15%)
Query: 188 IQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 247
+F+L DIGEGI E I +W + G I E DV+ EV++DK+ V I S GTV +V
Sbjct: 3 FEFRLPDIGEGIHEGEIVKWF--IKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVL 60
Query: 248 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPN 307
EG VA+VG ++ I+ AP E+ D + K+
Sbjct: 61 VDEGTVAVVGDVIVKID------------------APDAEEMQFKGHGDDED---SKKEE 99
Query: 308 KVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELR 367
K P+ +++ + + ++++K + A PSVR+ + ++ K +
Sbjct: 100 KEQESPV----------QEEASSTQSQEKTEVDESK-TVKAMPSVRKYARENGVNIKAVN 148
Query: 368 GTGKQGRVLKEDIITYMNSPIDE----TNLAHTAHVREASNVISIRGYVKGMFKSMTE 421
G+GK GR+ KEDI Y+N E T++A + + N + + +G F TE
Sbjct: 149 GSGKNGRITKEDIDAYLNGGSSEEGSNTSVASESTSSDVVNASATQALPEGDFPETTE 206
>sp|P47514|ODP2_MYCGE Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Mycoplasma genitalium (strain
ATCC 33530 / G-37 / NCTC 10195) GN=pdhC PE=3 SV=1
Length = 384
Score = 136 bits (343), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 130/225 (57%), Gaps = 5/225 (2%)
Query: 681 IPIRGYVKGMFKSMTEANTI-PSLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFF 739
I I K + ++MT+++ I P+ LT V+ T+L+ + V+ K+ +K++Y FF
Sbjct: 157 IAISTMRKAIAEAMTKSHAIIPTTVLTFYVNATKLKQYRESVNGYALSKYSMKISYFAFF 216
Query: 740 IKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDIT 799
+KA+ + + P+ NAS DP Q I++N D N+ IA+DT+ GL+VPNIK +++I
Sbjct: 217 VKAIVNALKKFPVFNASYDPDQNEIVLNDDINVGIAVDTEEGLIVPNIKQAQTKSVVEIA 276
Query: 800 RELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPR 859
+ ++ + + K+ D+ GTIS++N G++G + PII ++CIVA G ++ R
Sbjct: 277 QAIVDLANKARTKKIKLTDLNKGTISVTNFGSLGAAVGTPIIKYPEMCIVATGNLE--ER 334
Query: 860 F-DAEMRIVAKCILNVTWAADHRVVDGATVAR-AATLWKSLENIL 902
E I IL +T AADHR VDGA V R + K +E ++
Sbjct: 335 IVKVENGIAVHTILPLTIAADHRWVDGADVGRFGKEIAKQIEELI 379
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 77/128 (60%), Gaps = 3/128 (2%)
Query: 901 ILVNPDHNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGT 960
I++N D N+ IA+DT+ GL+VPNIK S+++I + ++ + + K+ D+ GT
Sbjct: 241 IVLNDDINVGIAVDTEEGLIVPNIKQAQTKSVVEIAQAIVDLANKARTKKIKLTDLNKGT 300
Query: 961 ISMSNVGNVGGTLVQPIIVPRQVCIVAFGKIQLLPRF-DAEMRVVAKCILNVTWAADHRV 1019
IS++N G++G + PII ++CIVA G ++ R E + IL +T AADHR
Sbjct: 301 ISVTNFGSLGAAVGTPIIKYPEMCIVATGNLE--ERIVKVENGIAVHTILPLTIAADHRW 358
Query: 1020 VDGATVAR 1027
VDGA V R
Sbjct: 359 VDGADVGR 366
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 73/181 (40%), Gaps = 31/181 (17%)
Query: 189 QFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYY 248
+FK D+GEG+ E + E V + +I+E V VE+DK + + S + GT+ +
Sbjct: 4 EFKFTDVGEGLHEGKVTEILKQVGDQIKIDEALFV--VETDKVTTELPSPFAGTISAINV 61
Query: 249 GEGDVALVGKPLLDIE-------VEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNET 301
GDV +G+ + I VE + EE + A V E+ D
Sbjct: 62 KVGDVVSIGQVMAVIGEKTSTPLVEPKPQPTEEVAKVKEAGASVVGEIKVSD-------- 113
Query: 302 LHKEPNKVNREPI-AHKPDVTPDLSRDSAVSHLNQPVNL-----NKNKWKILATPSVRRM 355
N PI KP TP + S N V +K + K +A ++R+
Sbjct: 114 --------NLFPIFGVKPHATPAVKDTKVASSTNITVETTQKPESKTEQKTIAISTMRKA 165
Query: 356 I 356
I
Sbjct: 166 I 166
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 37/217 (17%)
Query: 449 QFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYY 508
+F D+GEG+ E + E V + +I+E V VE+DK + + S + GT+ +
Sbjct: 4 EFKFTDVGEGLHEGKVTEILKQVGDQIKIDEALFV--VETDKVTTELPSPFAGTISAINV 61
Query: 509 GEGDVALVGKPLLDIE-------VEDEGVAAEEADSLDRKAAPGVSEVNTPDT-----SD 556
GDV +G+ + I VE + EE + A V E+ D
Sbjct: 62 KVGDVVSIGQVMAVIGEKTSTPLVEPKPQPTEEVAKVKEAGASVVGEIKVSDNLFPIFGV 121
Query: 557 QPNETLHKDPNKIDTKELRGTGKQGRVLKEDIITYMNSPSDETNPAHTAHVREASNVISI 616
+P H P DTK T IT + E+ + I+I
Sbjct: 122 KP----HATPAVKDTKVASSTN----------ITVETTQKPES--------KTEQKTIAI 159
Query: 617 RGYVKGMFKSMTEANT-IPSLRLTEEVDTTQLRDVKK 652
K + ++MT+++ IP+ LT V+ T+L+ ++
Sbjct: 160 STMRKAIAEAMTKSHAIIPTTVLTFYVNATKLKQYRE 196
>sp|P37942|ODB2_BACSU Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex OS=Bacillus subtilis (strain
168) GN=bfmBB PE=3 SV=1
Length = 424
Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 118/473 (24%), Positives = 201/473 (42%), Gaps = 64/473 (13%)
Query: 449 QFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYY 508
Q + +GE + E I +W V G ++N++D + EV +DK + + S + GT+ ++
Sbjct: 5 QMTMPQLGESVTEGTISKWL--VAPGDKVNKYDPIAEVMTDKVNAEVPSSFTGTITELVG 62
Query: 509 GEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHK---- 564
EG VG+ + IE E A ++ + A + +DQPN+ +
Sbjct: 63 EEGQTLQVGEMICKIETEGANPAEQKQEQPAASEAAENPVAKSAGAADQPNKKRYSPAVL 122
Query: 565 ---DPNKIDTKELRGTGKQGRVLKEDIITYMNSPS-DETNPAHTAHVREASNVISIRGYV 620
+ ID ++ GTG GR+ ++DI + + E NP A S
Sbjct: 123 RLAGEHGIDLDQVTGTGAGGRITRKDIQRLIETGGVQEQNPEELKTAAPAPKSAS----- 177
Query: 621 KGMFKSMTEANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSPSDETN-PAHTAHVREASN 679
K E P +ET+ PA A +E
Sbjct: 178 ------------------------------KPE--------PKEETSYPASAAGDKE--- 196
Query: 680 VIPIRGYVKGMFKSMTEANT-IPSLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPF 738
IP+ G K + +M + T IP EVD T + +N + +++ LT+ F
Sbjct: 197 -IPVTGVRKAIASNMKRSKTEIPHAWTMMEVDVTNMVAYRNSIKDSFKKTEGFNLTFFAF 255
Query: 739 FIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDI 798
F+KA++ + E P +N+ + I+ D NISIA+ T+ L VP IK+ ++ + I
Sbjct: 256 FVKAVAQALKEFPQMNSMW--AGDKIIQKKDINISIAVATEDSLFVPVIKNADEKTIKGI 313
Query: 799 TRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLP 858
+++ + +GK+ D+QGGT +++N G+ G II Q I+ I P
Sbjct: 314 AKDITGLAKKVRDGKLTADDMQGGTFTVNNTGSFGSVQSMGIINYPQAAILQVESIVKRP 373
Query: 859 RFDAEMRIVAKCILNVTWAADHRVVDGATVARAATLWKSLENILVNPDHNISI 911
I + ++N+ + DHRV+DG R ++ IL + D S+
Sbjct: 374 VVMDNGMIAVRDMVNLCLSLDHRVLDGLVCGR---FLGRVKQILESIDEKTSV 423
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 893 TLWKSLENILVNPDHNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVL 952
++W + I+ D NISIA+ T+ L VP IK+ ++ ++ I +++ + +GK+
Sbjct: 272 SMWAG-DKIIQKKDINISIAVATEDSLFVPVIKNADEKTIKGIAKDITGLAKKVRDGKLT 330
Query: 953 PRDIQGGTISMSNVGNVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVT 1012
D+QGGT +++N G+ G II Q I+ I P + + ++N+
Sbjct: 331 ADDMQGGTFTVNNTGSFGSVQSMGIINYPQAAILQVESIVKRPVVMDNGMIAVRDMVNLC 390
Query: 1013 WAADHRVVDGATVARAATLWKSLVEN 1038
+ DHRV+DG R K ++E+
Sbjct: 391 LSLDHRVLDGLVCGRFLGRVKQILES 416
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 47/192 (24%)
Query: 189 QFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYY 248
Q + +GE + E I +W V G ++N++D + EV +DK + + S + GT+ ++
Sbjct: 5 QMTMPQLGESVTEGTISKWL--VAPGDKVNKYDPIAEVMTDKVNAEVPSSFTGTITELVG 62
Query: 249 GEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPNK 308
EG VG+ + IE E A + ++ P SE
Sbjct: 63 EEGQTLQVGEMICKIETEGANPAEQ------KQEQPAASE-------------------- 96
Query: 309 VNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELRG 368
P+A + +QP NK ++ +P+V R+ + ID ++ G
Sbjct: 97 AAENPVAK------------SAGAADQP---NKKRY----SPAVLRLAGEHGIDLDQVTG 137
Query: 369 TGKQGRVLKEDI 380
TG GR+ ++DI
Sbjct: 138 TGAGGRITRKDI 149
>sp|P75392|ODP2_MYCPN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Mycoplasma pneumoniae (strain
ATCC 29342 / M129) GN=pdhC PE=3 SV=1
Length = 402
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 122/219 (55%), Gaps = 7/219 (3%)
Query: 690 MFKSMTEA-----NTIPSLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIKALS 744
M K++ EA IP+ LT V+ T+L+ + V+ L K+ +K+++ FF+KA+
Sbjct: 180 MRKAIAEAMVKSHENIPATILTFYVNATKLKQYRESVNGLALSKYNMKISFFAFFVKAIV 239
Query: 745 LCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLR 804
+ + P+ N D + I++N D N+ IA+DT GL+VPNIK ++DI ++++
Sbjct: 240 NALKKFPVFNGRYDKERNLIVLNKDVNVGIAVDTPDGLIVPNIKQAQTKSVVDIAKDIVD 299
Query: 805 IQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPRFDAEM 864
+ + ++ D+ GTIS++N G++G PII ++CIVA G ++ AE
Sbjct: 300 LANRARSKQIKLPDLSKGTISVTNFGSLGAAFGTPIIKHPEMCIVATGNMEER-VVRAEG 358
Query: 865 RIVAKCILNVTWAADHRVVDGATVAR-AATLWKSLENIL 902
+ IL +T AADHR VDGA V R + K +E ++
Sbjct: 359 GVAVHTILPLTIAADHRWVDGADVGRFGKEIAKQIEELI 397
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
Query: 901 ILVNPDHNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGT 960
I++N D N+ IA+DT GL+VPNIK S++DI ++++ + + ++ D+ GT
Sbjct: 259 IVLNKDVNVGIAVDTPDGLIVPNIKQAQTKSVVDIAKDIVDLANRARSKQIKLPDLSKGT 318
Query: 961 ISMSNVGNVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHRVV 1020
IS++N G++G PII ++CIVA G ++ AE V IL +T AADHR V
Sbjct: 319 ISVTNFGSLGAAFGTPIIKHPEMCIVATGNMEER-VVRAEGGVAVHTILPLTIAADHRWV 377
Query: 1021 DGATVAR 1027
DGA V R
Sbjct: 378 DGADVGR 384
Score = 39.3 bits (90), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 189 QFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYY 248
+FK D+GEG+ E + E V + +++E V VE+DK + + S Y G + +
Sbjct: 4 EFKFTDVGEGLHEGKVTEILKKVGDTIKVDEALFV--VETDKVTTELPSPYAGVITAITT 61
Query: 249 GEGDVALVGKPLLDIE 264
GDV +G+ + I+
Sbjct: 62 NVGDVVHIGQVMAVID 77
Score = 37.4 bits (85), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 449 QFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYY 508
+F D+GEG+ E + E V + +++E V VE+DK + + S Y G + +
Sbjct: 4 EFKFTDVGEGLHEGKVTEILKKVGDTIKVDEALFV--VETDKVTTELPSPYAGVITAITT 61
Query: 509 GEGDVALVGKPLLDIE 524
GDV +G+ + I+
Sbjct: 62 NVGDVVHIGQVMAVID 77
>sp|P11961|ODP2_GEOSE Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Geobacillus stearothermophilus
GN=pdhC PE=1 SV=3
Length = 428
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 126/218 (57%), Gaps = 5/218 (2%)
Query: 683 IRGYVKGMFKSMTEA-NTIPSLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIK 741
+ G + + K+M + +T P + L +E D T+L + + A+ EK +KLT++P+ +K
Sbjct: 203 MSGIRRAIAKAMVHSKHTAPHVTLMDEADVTKLVAHRKKFKAIAAEK-GIKLTFLPYVVK 261
Query: 742 ALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRE 801
AL + E+P+LN SID E I+ +NI IA DT GL+VP IK ++ + + +E
Sbjct: 262 ALVSALREYPVLNTSIDDETEEIIQKHYYNIGIAADTDRGLLVPVIKHADRKPIFALAQE 321
Query: 802 LLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPRF- 860
+ + + +GK+ P +++G + +++N+G+ GG P+I +V I+ G+I P
Sbjct: 322 INELAEKARDGKLTPGEMKGASCTITNIGSAGGQWFTPVINHPEVAILGIGRIAEKPIVR 381
Query: 861 DAEMRIVAKCILNVTWAADHRVVDGATVARAATLWKSL 898
D E IVA +L ++ + DHR++DGAT +A K L
Sbjct: 382 DGE--IVAAPMLALSLSFDHRMIDGATAQKALNHIKRL 417
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 86/148 (58%), Gaps = 3/148 (2%)
Query: 899 ENILVNPDHNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQG 958
E I+ +NI IA DT GL+VP IK ++ + + +E+ + + +GK+ P +++G
Sbjct: 282 EEIIQKHYYNIGIAADTDRGLLVPVIKHADRKPIFALAQEINELAEKARDGKLTPGEMKG 341
Query: 959 GTISMSNVGNVGGTLVQPIIVPRQVCIVAFGKIQLLPRF-DAEMRVVAKCILNVTWAADH 1017
+ +++N+G+ GG P+I +V I+ G+I P D E +VA +L ++ + DH
Sbjct: 342 ASCTITNIGSAGGQWFTPVINHPEVAILGIGRIAEKPIVRDGE--IVAAPMLALSLSFDH 399
Query: 1018 RVVDGATVARAATLWKSLVENPALLLTQ 1045
R++DGAT +A K L+ +P LLL +
Sbjct: 400 RMIDGATAQKALNHIKRLLSDPELLLME 427
Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 32/197 (16%)
Query: 188 IQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 247
+FKL DIGEGI E I +W V G +NE DV+CEV++DKA V I S KG V ++
Sbjct: 3 FEFKLPDIGEGIHEGEIVKWF--VKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEIL 60
Query: 248 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPN 307
EG VA VG+ L+ ++ APG + K
Sbjct: 61 VPEGTVATVGQTLITLD------------------APGYENMT------------FKGQE 90
Query: 308 KVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELR 367
+ + V+ + D+ + +++A PSVR+ + +D + ++
Sbjct: 91 QEEAKKEEKTETVSKEEKVDAVAPNAPAAEAEAGPNRRVIAMPSVRKYAREKGVDIRLVQ 150
Query: 368 GTGKQGRVLKEDIITYM 384
GTGK GRVLKEDI ++
Sbjct: 151 GTGKNGRVLKEDIDAFL 167
>sp|Q6FYD4|ODO2_BARQU Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Bartonella
quintana (strain Toulouse) GN=sucB PE=3 SV=1
Length = 410
Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 117/463 (25%), Positives = 205/463 (44%), Gaps = 77/463 (16%)
Query: 455 IGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYYGEGDVA 514
+GE + E I +W + E ++E + E+E+DK +V + S G + ++ EGD+
Sbjct: 10 LGESVTEATIGKWFKKLGEAVAVDE--PLVELETDKVTVEVPSPVMGKLTEIIAKEGDIV 67
Query: 515 LVGKPLLDIEVEDEGVAAEEADSLDR-KAAPGVSEVNTPDTSDQPNETLHKDP------- 566
V L +E G++ + S AP E +P +S P+ T+ P
Sbjct: 68 EVNAVLGFVESGAAGISQSFSPSATSIPEAPSELE-QSPSSSATPSGTMPPAPSAAKLMA 126
Query: 567 -NKIDTKELRGTGKQGRVLKEDIITYMNSPSDETNPAHTAHVREASNVISIRGYVKGMFK 625
N I ++ G+GK+G++LKED++ + A +AS ++ +
Sbjct: 127 ENNIAKSDISGSGKRGQILKEDVLGAL------------AQGTKASTSVAT------LTA 168
Query: 626 SMTEANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSPSDETNPAHTAHVREASNVIPIRG 685
S + A I +R E V T+LR +++A N
Sbjct: 169 SSSSAAPIQEMR-EERVRMTKLRQTIAR-------------------RLKDAQN------ 202
Query: 686 YVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIKALSL 745
T L EVD + + D++ + L+++K +KL +M FF KA+
Sbjct: 203 -------------TAAMLTTFNEVDMSAVMDLRKRYKDLFEKKHGVKLGFMGFFTKAVCH 249
Query: 746 CMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLRI 805
+ E P +NA ID T +I+ N IA+ T GLVVP ++ +++ L +I +E+ R+
Sbjct: 250 ALKEFPTVNAEIDGT--DIVYKNYVNAGIAVGTDKGLVVPVVRDADQMSLAEIEKEISRL 307
Query: 806 QGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPRFDAEMR 865
+ +GK+ D+QGGT +++N G G + PI+ Q I+ I+
Sbjct: 308 GRLARDGKLAVSDMQGGTFTITNGGVYGSLMSTPILNAPQSGILGMHAIKERAMVVGGQI 367
Query: 866 IVAKC-ILNVTWAADHRVVDGATVARAATLWKSLENILVNPDH 907
I+ C ++ + + DHR+VDG A T ++ L +P+
Sbjct: 368 II--CPMMYLALSYDHRIVDG---QEAVTFLVRVKESLEDPER 405
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 9/140 (6%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
N IA+ T GLVVP ++ +++SL +I +E+ R+ + +GK+ D+QGGT +++N G
Sbjct: 273 NAGIAVGTDKGLVVPVVRDADQMSLAEIEKEISRLGRLARDGKLAVSDMQGGTFTITNGG 332
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCI----LNVTWAADHRVVDGA 1023
G + PI+ Q I+ I+ + M V + I + + + DHR+VDG
Sbjct: 333 VYGSLMSTPILNAPQSGILGMHAIK-----ERAMVVGGQIIICPMMYLALSYDHRIVDGQ 387
Query: 1024 TVARAATLWKSLVENPALLL 1043
K +E+P L+
Sbjct: 388 EAVTFLVRVKESLEDPERLV 407
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 79/192 (41%), Gaps = 46/192 (23%)
Query: 190 FKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYYG 249
++ +GE + E I +W + E ++E + E+E+DK +V + S G + ++
Sbjct: 5 IRVPTLGESVTEATIGKWFKKLGEAVAVDE--PLVELETDKVTVEVPSPVMGKLTEIIAK 62
Query: 250 EGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPNKV 309
EGD+ V L +E A G+S+ +P + P + P+++
Sbjct: 63 EGDIVEVNAVLGFVE----------------SGAAGISQSFSPSATSIP-----EAPSEL 101
Query: 310 NREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELRGT 369
+ P SA P PS +++ I ++ G+
Sbjct: 102 EQSP------------SSSATPSGTMP-----------PAPSAAKLMAENNIAKSDISGS 138
Query: 370 GKQGRVLKEDII 381
GK+G++LKED++
Sbjct: 139 GKRGQILKEDVL 150
>sp|P09062|ODB2_PSEPU Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex OS=Pseudomonas putida GN=bkdB
PE=3 SV=1
Length = 423
Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 197/458 (43%), Gaps = 48/458 (10%)
Query: 450 FNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYYG 509
+ DIGEGI +V + EW V G I E VV +V +DKA+V I S G V +
Sbjct: 6 IKMPDIGEGIAQVELVEWF--VKVGDIIAEDQVVADVMTDKATVEIPSPVSGKVLALGGQ 63
Query: 510 EGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKDPNKI 569
G+V VG L+ IEVE G + V+ P
Sbjct: 64 PGEVMAVGSELIRIEVEGSG-----------------NHVDVPQAKPAEVPAAPVAAKPE 106
Query: 570 DTKELRGTGKQGRVLKEDIITYMNSPSDETNPAHTAHVREASNVISIRGYVKGMFKSMTE 629
K+++ Q E P D+ + R I +R YV G
Sbjct: 107 PQKDVKPAAYQASASHEAAPIVPRQPGDKPLASPAVRKRALDAGIELR-YVHG------- 158
Query: 630 ANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSPSDETNPAHTAHVREA-SNVIPIRGYVK 688
+ P+ R+ E D+ +M+ P + R S +P+ G +
Sbjct: 159 --SGPAGRILHE------------DLDAFMSKPQSAAGQTPNGYARRTDSEQVPVIGLRR 204
Query: 689 GMFKSMTEANT-IPSLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIKALSLCM 747
+ + M +A + EE+D T L ++ Q+++ + + R KLT +PF ++AL + +
Sbjct: 205 KIAQRMQDAKRRVAHFSYVEEIDVTALEALRQQLNSKHGDS-RGKLTLLPFLVRALVVAL 263
Query: 748 TEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLRIQG 807
+ P +NA+ D + I + ++ IA +GL+VP ++ L E+ R+
Sbjct: 264 RDFPQINATYDDEAQIITRHGAVHVGIATQGDNGLMVPVLRHAEAGSLWANAGEISRLAN 323
Query: 808 CSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPRFDAEMRIV 867
+ K ++ G TI+++++G +GG + P++ +V IV ++ P + +IV
Sbjct: 324 AARNNKASREELSGSTITLTSLGALGGIVSTPVVNTPEVAIVGVNRMVERPVV-IDGQIV 382
Query: 868 AKCILNVTWAADHRVVDGATVARAATLWKSLENILVNP 905
+ ++N++ + DHRVVDG AA +++ +L P
Sbjct: 383 VRKMMNLSSSFDHRVVDGMD---AALFIQAVRGLLEQP 417
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 101/238 (42%), Gaps = 35/238 (14%)
Query: 190 FKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYYG 249
K+ DIGEGI +V + EW V G I E VV +V +DKA+V I S G V +
Sbjct: 6 IKMPDIGEGIAQVELVEWF--VKVGDIIAEDQVVADVMTDKATVEIPSPVSGKVLALGGQ 63
Query: 250 EGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTS----DQPNETLHKE 305
G+V VG L+ IEVE G + V+ P E
Sbjct: 64 PGEVMAVGSELIRIEVEGSG-----------------NHVDVPQAKPAEVPAAPVAAKPE 106
Query: 306 PNKVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKE 365
P K DV P + SA SH P+ + K LA+P+VR+ I+ +
Sbjct: 107 PQK----------DVKPAAYQASA-SHEAAPIVPRQPGDKPLASPAVRKRALDAGIELRY 155
Query: 366 LRGTGKQGRVLKEDIITYMNSPIDETNLAHTAHVREA-SNVISIRGYVKGMFKSMTEA 422
+ G+G GR+L ED+ +M+ P + R S + + G + + + M +A
Sbjct: 156 VHGSGPAGRILHEDLDAFMSKPQSAAGQTPNGYARRTDSEQVPVIGLRRKIAQRMQDA 213
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
++ IA +GL+VP ++ SL E+ R+ + K ++ G TI+++++G
Sbjct: 287 HVGIATQGDNGLMVPVLRHAEAGSLWANAGEISRLANAARNNKASREELSGSTITLTSLG 346
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHRVVDGATVAR 1027
+GG + P++ +V IV ++ P + ++V + ++N++ + DHRVVDG A
Sbjct: 347 ALGGIVSTPVVNTPEVAIVGVNRMVERPVV-IDGQIVVRKMMNLSSSFDHRVVDGMDAAL 405
Query: 1028 AATLWKSLVENPALLLTQ 1045
+ L+E PA L +
Sbjct: 406 FIQAVRGLLEQPACLFVE 423
>sp|Q1RHI5|ODO2_RICBR Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia
bellii (strain RML369-C) GN=sucB PE=3 SV=1
Length = 400
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 209/480 (43%), Gaps = 106/480 (22%)
Query: 448 IQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 507
++ + +GE + E I +W EG + +++ E+E++K ++ + S GT+ K+
Sbjct: 3 VKIIVPSLGESVTEATIAKWYKK--EGDAVKTDELLLEIETEKVTLEVNSPCNGTIGKII 60
Query: 508 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQP-NETLHKDP 566
+G VG+ + DI E E VA +E P T+ QP E + K P
Sbjct: 61 KADGANVAVGEEIGDIN-EGEAVATNS------------NEAAKPQTASQPVPEKVPKKP 107
Query: 567 -----------------NKIDTKELRGTGKQGRVLKEDIITYMNSPSDETNPAHTAHVRE 609
NK+D ++GTGK GR+ K D++ MN+P+ PA T+
Sbjct: 108 AVANNTLAPSVQKLVTENKLDPNNIKGTGKDGRITKGDVLETMNAPT----PAATS---- 159
Query: 610 ASNVISIRGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSPSDETNPA 669
T ++ S E V ++LR + + N+ + T
Sbjct: 160 ------------------TTSSAKASEERVERVRMSRLRKTIAQRLKDSQNTAAILT--- 198
Query: 670 HTAHVREASNVIPIRGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKNQVSALYQEKF 729
T + + S VI +RG K F ++K
Sbjct: 199 -TFNEIDMSKVIALRGKYKDEF----------------------------------EKKH 223
Query: 730 RLKLTYMPFFIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPNIKS 789
+KL +M FF++A + P +NA ID ++++ ++I +A+ T+ GLVVP ++
Sbjct: 224 GVKLGFMSFFVRATIEALKLIPSVNAEID--GDDLVYKNYYDIGVAVGTEQGLVVPVVRD 281
Query: 790 VNKLCLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQVCIV 849
+K+ DI + + + + +GK+ D+ GGT S+SN G G L PII P Q I+
Sbjct: 282 ADKMGFADIEKTIGGLAKKARDGKLSMADLSGGTFSISNGGVYGSLLSTPIINPPQSGIL 341
Query: 850 AFGKI-QLLPRFDAEMRIVAKCILNVTWAADHRVVDG----ATVARAATLWKSLENILVN 904
K + + D ++ I + ++ + + DHR++DG + + + L +S E +L+N
Sbjct: 342 GLHKTEERVVAIDGKIEI--RPMMYIALSYDHRIIDGKEAVSFLVKIKELIESPEKLLLN 399
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 15/144 (10%)
Query: 907 HNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNV 966
++I +A+ T+ GLVVP ++ +K+ DI + + + + +GK+ D+ GGT S+SN
Sbjct: 262 YDIGVAVGTEQGLVVPVVRDADKMGFADIEKTIGGLAKKARDGKLSMADLSGGTFSISNG 321
Query: 967 GNVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVA-------KCILNVTWAADHRV 1019
G G L PII P Q I+ K E RVVA + ++ + + DHR+
Sbjct: 322 GVYGSLLSTPIINPPQSGILGLHK--------TEERVVAIDGKIEIRPMMYIALSYDHRI 373
Query: 1020 VDGATVARAATLWKSLVENPALLL 1043
+DG K L+E+P LL
Sbjct: 374 IDGKEAVSFLVKIKELIESPEKLL 397
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 49/200 (24%)
Query: 188 IQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 247
++ + +GE + E I +W EG + +++ E+E++K ++ + S GT+ K+
Sbjct: 3 VKIIVPSLGESVTEATIAKWYKK--EGDAVKTDELLLEIETEKVTLEVNSPCNGTIGKII 60
Query: 248 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPN 307
+G VG+ + DI E E VA +E P T+ QP P
Sbjct: 61 KADGANVAVGEEIGDIN-EGEAVATNS------------NEAAKPQTASQP------VPE 101
Query: 308 KVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELR 367
KV ++P AV++ LA PSV++++ ++D ++
Sbjct: 102 KVPKKP---------------AVAN------------NTLA-PSVQKLVTENKLDPNNIK 133
Query: 368 GTGKQGRVLKEDIITYMNSP 387
GTGK GR+ K D++ MN+P
Sbjct: 134 GTGKDGRITKGDVLETMNAP 153
>sp|P06959|ODP2_ECOLI Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Escherichia coli (strain K12)
GN=aceF PE=1 SV=3
Length = 630
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/466 (24%), Positives = 209/466 (44%), Gaps = 82/466 (17%)
Query: 458 GIREVNIKEWNGN---VTE-----GARINEFDVVCEVESDKASVTITSRYKGTVRKVYYG 509
G++EVN+ + G+ VTE G ++ + VE DKAS+ + + + G V+++
Sbjct: 205 GVKEVNVPDIGGDEVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVN 264
Query: 510 EGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAP----------------GVSEVNTPD 553
GD G ++ EVE AA A AP G SE D
Sbjct: 265 VGDKVKTGSLIMIFEVEGAAPAAAPAKQEAAAPAPAAKAEAPAAAPAAKAEGKSEFAEND 324
Query: 554 TSDQPNETLHKDPNK--IDTKELRGTGKQGRVLKEDIITYMNSP--SDETNPAHTAHVRE 609
+ + + ++ +++GTG++GR+L+ED+ Y+ E PA T
Sbjct: 325 AYVHATPLIRRLAREFGVNLAKVKGTGRKGRILREDVQAYVKEAIKRAEAAPAATG---- 380
Query: 610 ASNVISIRGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSPSDETNPA 669
IP + +VD ++ ++++ ++
Sbjct: 381 ---------------------GGIPGMLPWPKVDFSKFGEIEEVEL-------------- 405
Query: 670 HTAHVREASNVIPIRGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDV-KNQVSALYQEK 728
+++ S R +V IP + ++ D T+L K Q + K
Sbjct: 406 --GRIQKISGANLSRNWV-----------MIPHVTHFDKTDITELEAFRKQQNEEAAKRK 452
Query: 729 FRLKLTYMPFFIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPNIK 788
+K+T + F +KA++ + + P N+S+ + + + NI +A+DT +GLVVP K
Sbjct: 453 LDVKITPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYINIGVAVDTPNGLVVPVFK 512
Query: 789 SVNKLCLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQVCI 848
VNK +++++REL+ I + +GK+ ++QGG ++S++G +G T PI+ +V I
Sbjct: 513 DVNKKGIIELSRELMTISKKARDGKLTAGEMQGGCFTISSIGGLGTTHFAPIVNAPEVAI 572
Query: 849 VAFGKIQLLPRFDAEMRIVAKCILNVTWAADHRVVDGATVARAATL 894
+ K + P ++ + V + +L ++ + DHRV+DGA AR T+
Sbjct: 573 LGVSKSAMEPVWNGK-EFVPRLMLPISLSFDHRVIDGADGARFITI 617
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 78/124 (62%), Gaps = 1/124 (0%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
NI +A+DT +GLVVP K VNK +++++REL+ I + +GK+ ++QGG ++S++G
Sbjct: 495 NIGVAVDTPNGLVVPVFKDVNKKGIIELSRELMTISKKARDGKLTAGEMQGGCFTISSIG 554
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHRVVDGATVAR 1027
+G T PI+ +V I+ K + P ++ + V + +L ++ + DHRV+DGA AR
Sbjct: 555 GLGTTHFAPIVNAPEVAILGVSKSAMEPVWNGK-EFVPRLMLPISLSFDHRVIDGADGAR 613
Query: 1028 AATL 1031
T+
Sbjct: 614 FITI 617
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%)
Query: 341 KNKWKILATPSVRRMIKHYEIDTKELRGTGKQGRVLKEDIITYMNSPIDETNLAHTA 397
+N + ATP +RR+ + + ++ +++GTG++GR+L+ED+ Y+ I A A
Sbjct: 322 ENDAYVHATPLIRRLAREFGVNLAKVKGTGRKGRILREDVQAYVKEAIKRAEAAPAA 378
>sp|P45118|ODP2_HAEIN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=aceF PE=3 SV=1
Length = 567
Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 114/192 (59%), Gaps = 2/192 (1%)
Query: 700 IPSLRLTEEVDTTQLRDVKNQVSALYQ-EKFRLKLTYMPFFIKALSLCMTEHPILNASID 758
IP + ++ D T L + + +AL + +K +K+T + F +KA++ + +P N+SI
Sbjct: 360 IPHVTHFDKADITDLEAFRKEQNALREKQKLGVKITPVVFIMKAVAKALEAYPRFNSSIT 419
Query: 759 PTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLRIQGCSHEGKVLPRD 818
+ +++ NI +A+DT +GLVVP K+VNK +++++REL+ + + EGK+ D
Sbjct: 420 EDAQRLILKKYINIGVAVDTPNGLVVPVFKNVNKKGIIELSRELMEVSKKAREGKLTASD 479
Query: 819 IQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPRFDAEMRIVAKCILNVTWAA 878
+QGG ++S++G +G T PI+ +V I+ K + P ++ + + IL ++ +
Sbjct: 480 MQGGCFTISSLGGIGTTHFAPIVNAPEVAILGVSKSSMEPVWNGK-EFAPRLILPMSLSF 538
Query: 879 DHRVVDGATVAR 890
DHRV+DGA AR
Sbjct: 539 DHRVIDGADGAR 550
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 81/131 (61%), Gaps = 1/131 (0%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
NI +A+DT +GLVVP K+VNK +++++REL+ + + EGK+ D+QGG ++S++G
Sbjct: 432 NIGVAVDTPNGLVVPVFKNVNKKGIIELSRELMEVSKKAREGKLTASDMQGGCFTISSLG 491
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHRVVDGATVAR 1027
+G T PI+ +V I+ K + P ++ + + IL ++ + DHRV+DGA AR
Sbjct: 492 GIGTTHFAPIVNAPEVAILGVSKSSMEPVWNGK-EFAPRLILPMSLSFDHRVIDGADGAR 550
Query: 1028 AATLWKSLVEN 1038
+ S++ +
Sbjct: 551 FISYLGSVLAD 561
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 33/51 (64%)
Query: 348 ATPSVRRMIKHYEIDTKELRGTGKQGRVLKEDIITYMNSPIDETNLAHTAH 398
ATP +RR+ + + ++ +++GTG++GR++KEDI Y+ + + TA
Sbjct: 259 ATPVIRRLAREFGVNLDKVKGTGRKGRIVKEDIEAYVKTAVKAYESGATAQ 309
Score = 37.0 bits (84), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 438 LHTSCIRHKLIQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITS 497
+ T+ +++ N+ DIG EVN+ E V G I E + VE DKAS+ + +
Sbjct: 99 VATAPTASAIVEVNVPDIGG--DEVNVTEIM--VAVGDTITEEQSLITVEGDKASMEVPA 154
Query: 498 RYKGTVRKVYYGEGDVALVGKPLLDIEV 525
+ G V+++ GD G ++ EV
Sbjct: 155 PFGGVVKEILVKSGDKVSTGSLIMRFEV 182
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 15/116 (12%)
Query: 189 QFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYY 248
Q ++ DIG EV + E NV + +++ + VE DKAS+ + + G V+++
Sbjct: 4 QIQIPDIGS--DEVTVTEVMVNVGDTISVDQS--IINVEGDKASMEVPAPEAGVVKEILV 59
Query: 249 GEGDVALVGKPLLDIEVEDEGVAAEE--ADSLDRKAAPGVS---------EVNTPD 293
GD G P+L +E AA+E A D AP V+ EVN PD
Sbjct: 60 KVGDKVSTGTPMLVLEAAGAAPAADEPTAPVADAPTAPVVATAPTASAIVEVNVPD 115
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 449 QFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYY 508
Q + DIG EV + E NV + +++ + VE DKAS+ + + G V+++
Sbjct: 4 QIQIPDIGS--DEVTVTEVMVNVGDTISVDQS--IINVEGDKASMEVPAPEAGVVKEILV 59
Query: 509 GEGDVALVGKPLLDIEVEDEGVAAEE--ADSLDRKAAPGVS---------EVNTPD 553
GD G P+L +E AA+E A D AP V+ EVN PD
Sbjct: 60 KVGDKVSTGTPMLVLEAAGAAPAADEPTAPVADAPTAPVVATAPTASAIVEVNVPD 115
>sp|Q59098|ODP2_CUPNH Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Cupriavidus necator (strain
ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=pdhB PE=3
SV=2
Length = 553
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 112/199 (56%), Gaps = 4/199 (2%)
Query: 700 IPSLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIKALSLCMTEHPILNASIDP 759
IP + +E D T+L + Q++ EK +K+T + F IKA + + P NAS+D
Sbjct: 350 IPHVTNHDEADITELEAFRLQLNK-ENEKSGIKVTMLAFMIKATVAALKKFPNFNASLD- 407
Query: 760 TQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLRIQGCSHEGKVLPRDI 819
+N+++ NI A DT +GLVVP IK +K +L+I++E+ + + +GK+ P +
Sbjct: 408 -GDNLVLKKYFNIGFAADTPNGLVVPVIKDADKKGVLEISQEMSELAKLARDGKLKPDQM 466
Query: 820 QGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPRFDAEMRIVAKCILNVTWAAD 879
QGG S+S++G +GGT PII +V I+ K P +D + + + L ++ + D
Sbjct: 467 QGGCFSISSLGGLGGTYFTPIINAPEVAIMGVCKSYQKPVWDGK-QFAPRLTLPLSLSWD 525
Query: 880 HRVVDGATVARAATLWKSL 898
HRV+DGA AR T + L
Sbjct: 526 HRVIDGAEAARFNTYFGQL 544
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 82/140 (58%), Gaps = 1/140 (0%)
Query: 899 ENILVNPDHNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQG 958
+N+++ NI A DT +GLVVP IK +K +L+I++E+ + + +GK+ P +QG
Sbjct: 409 DNLVLKKYFNIGFAADTPNGLVVPVIKDADKKGVLEISQEMSELAKLARDGKLKPDQMQG 468
Query: 959 GTISMSNVGNVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHR 1018
G S+S++G +GGT PII +V I+ K P +D + + + L ++ + DHR
Sbjct: 469 GCFSISSLGGLGGTYFTPIINAPEVAIMGVCKSYQKPVWDGK-QFAPRLTLPLSLSWDHR 527
Query: 1019 VVDGATVARAATLWKSLVEN 1038
V+DGA AR T + L+ +
Sbjct: 528 VIDGAEAARFNTYFGQLLAD 547
Score = 37.4 bits (85), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 348 ATPSVRRMIKHYEIDTKELRGTGKQGRVLKEDIITYMNS 386
A+PSVR+ + +D + GTG +GR+ +ED+ Y+
Sbjct: 251 ASPSVRKFARELGVDVSRVPGTGPKGRITQEDVQGYVKG 289
>sp|Q9I1M0|ODB2_PSEAE Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=bkdB PE=1 SV=1
Length = 428
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 199/457 (43%), Gaps = 41/457 (8%)
Query: 450 FNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYYG 509
+ DIGEGI EV + EW+ V G +NE V+ EV +DKA+V I S G +
Sbjct: 6 IKMPDIGEGIAEVELVEWH--VQVGDSVNEDQVLAEVMTDKATVEIPSPVAGRI------ 57
Query: 510 EGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKDPNKI 569
+AL G+P + V E + L+ + A ++E T P + P +
Sbjct: 58 ---LALGGQPGQVMAVGGELI------RLEVEGAGNLAESPAAATPAAPVAATPEKPKEA 108
Query: 570 DTKELRGTGKQGRVLKEDIITYMNSPSDETNPAHTAHVREASNVISIRGYVKGMFKSMTE 629
+ + R L++ +P P AS + R G+ +
Sbjct: 109 PVAAPKAAAEAPRALRDS-----EAPRQRRQPGERPL---ASPAVRQRARDLGIELQFVQ 160
Query: 630 ANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSPSDETNPAHTAHVREASNVIPIRGYVKG 689
+ L E++D +T S + A R +P+ G +
Sbjct: 161 GSGPAGRVLHEDLDA----------YLTQDGSVARSGGAAQGYAERHDEQAVPVIGLRRK 210
Query: 690 MFKSMTEANT-IPSLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIKALSLCMT 748
+ + M +A IP EE+D T L ++ ++ + + R KLT +PF ++A+ + +
Sbjct: 211 IAQKMQDAKRRIPHFSYVEEIDVTDLEALRAHLNQKWGGQ-RGKLTLLPFLVRAMVVALR 269
Query: 749 EHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLRIQGC 808
+ P LNA D E + ++ IA + +GL+VP ++ L E+ R+
Sbjct: 270 DFPQLNARYDDEAEVVTRYGAVHVGIATQSDNGLMVPVLRHAESRDLWGNASEVARLAEA 329
Query: 809 SHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPRFDAEMRIVA 868
+ GK +++ G TI++S++G +GG + P+I +V IV +I P IV
Sbjct: 330 ARSGKAQRQELSGSTITLSSLGVLGGIVSTPVINHPEVAIVGVNRIVERPMV-VGGNIVV 388
Query: 869 KCILNVTWAADHRVVDGATVARAATLWKSLENILVNP 905
+ ++N++ + DHRVVDG AA +++ +L +P
Sbjct: 389 RKMMNLSSSFDHRVVDGMD---AAAFIQAVRGLLEHP 422
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 88/195 (45%), Gaps = 23/195 (11%)
Query: 190 FKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYYG 249
K+ DIGEGI EV + EW+ V G +NE V+ EV +DKA+V I S G + +
Sbjct: 6 IKMPDIGEGIAEVELVEWH--VQVGDSVNEDQVLAEVMTDKATVEIPSPVAGRILALGGQ 63
Query: 250 EGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPNKV 309
G V VG L+ +EVE G AE + T ++P E P
Sbjct: 64 PGQVMAVGGELIRLEVEGAGNLAESPAAA-------TPAAPVAATPEKPKEAPVAAPKAA 116
Query: 310 NREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELRGT 369
P A + P R QP + LA+P+VR+ + I+ + ++G+
Sbjct: 117 AEAPRALRDSEAPRQRR--------QPGE------RPLASPAVRQRARDLGIELQFVQGS 162
Query: 370 GKQGRVLKEDIITYM 384
G GRVL ED+ Y+
Sbjct: 163 GPAGRVLHEDLDAYL 177
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
++ IA + +GL+VP ++ L E+ R+ + GK +++ G TI++S++G
Sbjct: 292 HVGIATQSDNGLMVPVLRHAESRDLWGNASEVARLAEAARSGKAQRQELSGSTITLSSLG 351
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHRVVDGATVAR 1027
+GG + P+I +V IV +I P +V + ++N++ + DHRVVDG A
Sbjct: 352 VLGGIVSTPVINHPEVAIVGVNRIVERPMV-VGGNIVVRKMMNLSSSFDHRVVDGMDAAA 410
Query: 1028 AATLWKSLVENPALLLTQ 1045
+ L+E+PA L +
Sbjct: 411 FIQAVRGLLEHPATLFLE 428
>sp|Q8K9T8|ODP2_BUCAP Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=aceF PE=3 SV=2
Length = 402
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 140/253 (55%), Gaps = 12/253 (4%)
Query: 652 KEDIITYM-NSPSD------ETNPAHTAHVREASNVIPIRGYVKGMFKSMTEA-NTIPSL 703
KEDI Y+ N+ S+ E N H ++ N IPI + + K++ + IP +
Sbjct: 139 KEDIELYIRNNTSNKSSFNIEKNNTTNFH-KDLFNEIPITNIQQIIGKNLHQNWVNIPHV 197
Query: 704 RLTEEVDTTQLRDVKNQVSALYQEKFRL--KLTYMPFFIKALSLCMTEHPILNASIDPTQ 761
+EV+ T L + +++ + ++K + K+T +PF IK+++ + E PI N+S+ +
Sbjct: 198 TQFDEVNITLLEEFRHKYNTEKKQKNNMCSKITILPFIIKSVAYGLLEFPIFNSSLSVNK 257
Query: 762 ENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLRIQGCSHEGKVLPRDIQG 821
+ I + N+ IA+D ++ L VP +K+V+K + +++ EL+ + +HE K+ D++
Sbjct: 258 KTIFLKKYVNVGIAVDVQNALFVPVLKNVDKKNIANLSSELIFLSKKAHENKLDASDMKD 317
Query: 822 GTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPRFDAEMRIVAKCILNVTWAADHR 881
G ++SN+G +GG+ PII +V I+ K + P ++ + + +L ++ + DHR
Sbjct: 318 GCFTISNLGGIGGSWFSPIINSPEVAILGVSKALIKPLWNGK-EFIPSLMLPLSLSYDHR 376
Query: 882 VVDGATVARAATL 894
V++GA AR T
Sbjct: 377 VINGADAARFLTF 389
Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
N+ IA+D ++ L VP +K+V+K ++ +++ EL+ + +HE K+ D++ G ++SN+G
Sbjct: 267 NVGIAVDVQNALFVPVLKNVDKKNIANLSSELIFLSKKAHENKLDASDMKDGCFTISNLG 326
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHRVVDGATVAR 1027
+GG+ PII +V I+ K + P ++ + + +L ++ + DHRV++GA AR
Sbjct: 327 GIGGSWFSPIINSPEVAILGVSKALIKPLWNGK-EFIPSLMLPLSLSYDHRVINGADAAR 385
Query: 1028 AATLWKSLVENPALLL 1043
T ++ + L+
Sbjct: 386 FLTFIGKMLSDIRFLI 401
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 72/187 (38%), Gaps = 45/187 (24%)
Query: 198 GIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYYGEGDVALVG 257
G+ EV + E + E ++++ + VE DKAS+ I S G V+ + G+
Sbjct: 5 GLEEVEVTEILVKIGEEIKLDQG--LITVEGDKASMEIPSPISGIVKDITIKIGEKVKTS 62
Query: 258 KPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPNKVNREPIAHK 317
++ +V + E D +N T + NE +E + + + H
Sbjct: 63 SIIMIFKVNNLNSIKNEKD------------LNYIKTEKKLNENFLEEKKDIKKIVLVH- 109
Query: 318 PDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELRGTGKQGRVLK 377
ATP VRR+ +H +D K + +G + R+LK
Sbjct: 110 ------------------------------ATPVVRRLARHLNVDLKNITPSGPKNRILK 139
Query: 378 EDIITYM 384
EDI Y+
Sbjct: 140 EDIELYI 146
>sp|Q8NNJ2|ODP2_CORGL Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Corynebacterium glutamicum
(strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 /
NCIMB 10025) GN=aceF PE=1 SV=1
Length = 675
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 112/215 (52%), Gaps = 9/215 (4%)
Query: 691 FKSMTEANTIPSLRLTE------EVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIKALS 744
+ +T T+ +L+++ EVD T++ +++ + + EK + LTY+PFF+KA+
Sbjct: 447 IREITAMKTVEALQISAQLTQLHEVDMTRVAELRKKNKPAFIEKHGVNLTYLPFFVKAVV 506
Query: 745 LCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLR 804
+ HP +NAS + + + + N+SIA+DT GL+ P I L + +I + ++
Sbjct: 507 EALVSHPNVNASFNAKTKEMTYHSSVNLSIAVDTPAGLLTPVIHDAQDLSIPEIAKAIVD 566
Query: 805 IQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPRFDAEM 864
+ S K+ P D+ GGT +++N+G+ G PI+VP Q I+ G I P E
Sbjct: 567 LADRSRNNKLKPNDLSGGTFTITNIGSEGALSDTPILVPPQAGILGTGAIVKRPVVITED 626
Query: 865 RIVAKCILNVTW---AADHRVVDGATVARAATLWK 896
I + I + + DH+VVDGA R T K
Sbjct: 627 GIDSIAIRQMVFLPLTYDHQVVDGADAGRFLTTIK 661
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 3/133 (2%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
N+SIA+DT GL+ P I LS+ +I + ++ + S K+ P D+ GGT +++N+G
Sbjct: 533 NLSIAVDTPAGLLTPVIHDAQDLSIPEIAKAIVDLADRSRNNKLKPNDLSGGTFTITNIG 592
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTW---AADHRVVDGAT 1024
+ G PI+VP Q I+ G I P E + + I + + DH+VVDGA
Sbjct: 593 SEGALSDTPILVPPQAGILGTGAIVKRPVVITEDGIDSIAIRQMVFLPLTYDHQVVDGAD 652
Query: 1025 VARAATLWKSLVE 1037
R T K +E
Sbjct: 653 AGRFLTTIKDRLE 665
>sp|Q869Y7|ODO2_DICDI Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex, mitochondrial
OS=Dictyostelium discoideum GN=odhB PE=1 SV=1
Length = 439
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 112/210 (53%), Gaps = 6/210 (2%)
Query: 698 NTIPSLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIKALSLCMTEHPILNASI 757
NT L E+D + L +++ +++K +K +M F+KA ++ + E PI+NAS+
Sbjct: 231 NTAAMLTTFNELDMSALMNMRKTYKDEFEKKHGVKFGFMSAFVKASTIALKEQPIVNASV 290
Query: 758 DPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLRIQGCSHEGKVLPR 817
+ + +I+ + + NI++A+ GLVVP I++ L DI +E+ R+ G + +
Sbjct: 291 E--ENDIVYHNNVNINVAVSAPRGLVVPVIRNCENLSFADIEKEIGRLSGLARNDALAIE 348
Query: 818 DIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPRFDAEMRIVAKCILNVTWA 877
D GGT ++SN G G PII P Q I+ I+ P + ++V + I+ +
Sbjct: 349 DSIGGTFTISNGGVFGSMFGTPIINPPQSAILGMHAIKDRP-YVVNGQVVVRPIMYLALT 407
Query: 878 ADHRVVDGATVARAATLWKSLENILVNPDH 907
DHR++DG A T K ++++L NP+
Sbjct: 408 YDHRIIDG---REAVTFLKKIKDVLENPER 434
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 900 NILVNPDHNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGG 959
+I+ + + NI++A+ GLVVP I++ LS DI +E+ R+ G + + D GG
Sbjct: 294 DIVYHNNVNINVAVSAPRGLVVPVIRNCENLSFADIEKEIGRLSGLARNDALAIEDSIGG 353
Query: 960 TISMSNVGNVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHRV 1019
T ++SN G G PII P Q I+ I+ P + +VV + I+ + DHR+
Sbjct: 354 TFTISNGGVFGSMFGTPIINPPQSAILGMHAIKDRP-YVVNGQVVVRPIMYLALTYDHRI 412
Query: 1020 VDGATVARAATLWKSLVENPALLLTQ 1045
+DG K ++ENP +L +
Sbjct: 413 IDGREAVTFLKKIKDVLENPERILLE 438
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 188 IQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 247
+ K+ +G+ I E I W NV + R++E VVC +E+DK ++ I + GT+ +++
Sbjct: 74 VVIKVPSMGDSISEGTIVAWTKNVGDSVRVDE--VVCSIETDKVTIDINAPVSGTIVELF 131
Query: 248 YGEGDVALVGKPLLDI 263
EG+ VG L I
Sbjct: 132 AKEGENVTVGNDLYKI 147
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 455 IGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYYGEGDVA 514
+G+ I E I W NV + R++E VVC +E+DK ++ I + GT+ +++ EG+
Sbjct: 81 MGDSISEGTIVAWTKNVGDSVRVDE--VVCSIETDKVTIDINAPVSGTIVELFAKEGENV 138
Query: 515 LVGKPLLDI 523
VG L I
Sbjct: 139 TVGNDLYKI 147
>sp|O31550|ACOC_BACSU Dihydrolipoyllysine-residue acetyltransferase component of acetoin
cleaving system OS=Bacillus subtilis (strain 168)
GN=acoC PE=3 SV=1
Length = 398
Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 196/465 (42%), Gaps = 81/465 (17%)
Query: 448 IQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 507
++ + +G +++ + WN V G + + + + ++S+K + I + KGT+ +
Sbjct: 3 VKVVMPKLGMAMKQGEVSIWNKKV--GDPVEKGESIASIQSEKIEMEIEAPEKGTLIDIK 60
Query: 508 YGEGDVALVGKPLLDI-----EVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETL 562
EG+ G + I V++E A D++ + P V + N P S
Sbjct: 61 VKEGEEVPPGTAICYIGDANESVQEEAGAPVAEDNMPQAVQP-VKQENKPAAS------- 112
Query: 563 HKDPNKIDTKELRGTGKQGRVLKEDIITYMNSPSDETNPAHTAHVREASNVISIRGYVKG 622
KD KI + K G LK+ +KG
Sbjct: 113 KKDRMKISPVARKIAEKAGLDLKQ---------------------------------LKG 139
Query: 623 MFKSMTEANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSPSDETNPAHTAHVREASNVIP 682
T P R+ ++ T L + KK D+ P +E IP
Sbjct: 140 ---------TGPGGRIVKDDVTKALAEQKK-----------DQAKPVSEQKAQE----IP 175
Query: 683 IRGYVKGMFKSMTE--ANTIPSLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFI 740
+ G K + M E AN+ L +T + D T+L ++ Q+S +E++ KLT F
Sbjct: 176 VTGMRKVIAARMQESLANSA-QLTITMKADITKLATLQKQLSPTAEERYGTKLTITHFVS 234
Query: 741 KALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITR 800
+A L + HP+LN+ E I+ +P ++ +A+ ++GLVVP I+ KL L+++ +
Sbjct: 235 RAAVLALQAHPVLNSFYQ--NERIITHPHVHLGMAVALENGLVVPVIRHAEKLSLIELAQ 292
Query: 801 ELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPRF 860
+ + EG+ ++QG T S++N+G G PI+ P + I+ G P +
Sbjct: 293 SISENAKKAREGRAGSEELQGSTFSITNLGAFGVEHFTPILNPPETGILGIGASYDTPVY 352
Query: 861 DAEMRIVAKCILNVTWAADHRVVDGATVARAATLWKSLENILVNP 905
E IV IL ++ DHR DGA AA K+++ L P
Sbjct: 353 QGE-EIVRSTILPLSLTFDHRACDGAP---AAAFLKAMKTYLEEP 393
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Query: 899 ENILVNPDHNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQG 958
E I+ +P ++ +A+ ++GLVVP I+ KLSL+++ + + + EG+ ++QG
Sbjct: 254 ERIITHPHVHLGMAVALENGLVVPVIRHAEKLSLIELAQSISENAKKAREGRAGSEELQG 313
Query: 959 GTISMSNVGNVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHR 1018
T S++N+G G PI+ P + I+ G P + E +V IL ++ DHR
Sbjct: 314 STFSITNLGAFGVEHFTPILNPPETGILGIGASYDTPVYQGE-EIVRSTILPLSLTFDHR 372
Query: 1019 VVDGATVARAATLWKSLVENPALLL 1043
DGA A K+ +E PA L+
Sbjct: 373 ACDGAPAAAFLKAMKTYLEEPAALI 397
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 81/193 (41%), Gaps = 44/193 (22%)
Query: 188 IQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 247
++ + +G +++ + WN V G + + + + ++S+K + I + KGT+ +
Sbjct: 3 VKVVMPKLGMAMKQGEVSIWNKKV--GDPVEKGESIASIQSEKIEMEIEAPEKGTLIDIK 60
Query: 248 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPN 307
EG+ G + I + +S+ +A V+E N P QP
Sbjct: 61 VKEGEEVPPGTAICYI--------GDANESVQEEAGAPVAEDNMPQAV-QP--------- 102
Query: 308 KVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELR 367
V N+P K++ KI +P R++ + +D K+L+
Sbjct: 103 ----------------------VKQENKPAASKKDRMKI--SPVARKIAEKAGLDLKQLK 138
Query: 368 GTGKQGRVLKEDI 380
GTG GR++K+D+
Sbjct: 139 GTGPGGRIVKDDV 151
>sp|P16263|ODO2_BACSU Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Bacillus
subtilis (strain 168) GN=odhB PE=3 SV=2
Length = 417
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 108/200 (54%), Gaps = 5/200 (2%)
Query: 708 EVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIKALSLCMTEHPILNASIDPTQENILVN 767
EVD T + +++ + + E+ +KL +M FF KA+ + ++P+LNA I + ++V
Sbjct: 218 EVDMTAVMNLRKRRKDQFFEQNEVKLGFMSFFTKAVVAALKKYPLLNAEIQ--GDELIVK 275
Query: 768 PDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLRIQGCSHEGKVLPRDIQGGTISMS 827
++I IA+ GLVVP ++ ++L I +E+ + + K+ ++QGG+ +++
Sbjct: 276 KFYDIGIAVAADEGLVVPVVRDADRLTFAGIEKEIGELAKKARNNKLTLSELQGGSFTIT 335
Query: 828 NVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPRFDAEMRIVAKCILNVTWAADHRVVDGAT 887
N G G + PI+ QV I+ KIQL P E R + ++ + + DHR+VDG
Sbjct: 336 NGGTFGSLMSTPILNSPQVGILGMHKIQLRPVAIDEERFENRPMMYIALSYDHRIVDG-- 393
Query: 888 VARAATLWKSLENILVNPDH 907
A +++N+L +P+
Sbjct: 394 -KEAVGFLVTIKNLLEDPEQ 412
Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 78/147 (53%)
Query: 899 ENILVNPDHNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQG 958
+ ++V ++I IA+ GLVVP ++ ++L+ I +E+ + + K+ ++QG
Sbjct: 270 DELIVKKFYDIGIAVAADEGLVVPVVRDADRLTFAGIEKEIGELAKKARNNKLTLSELQG 329
Query: 959 GTISMSNVGNVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHR 1018
G+ +++N G G + PI+ QV I+ KIQL P E R + ++ + + DHR
Sbjct: 330 GSFTITNGGTFGSLMSTPILNSPQVGILGMHKIQLRPVAIDEERFENRPMMYIALSYDHR 389
Query: 1019 VVDGATVARAATLWKSLVENPALLLTQ 1045
+VDG K+L+E+P LL +
Sbjct: 390 IVDGKEAVGFLVTIKNLLEDPEQLLLE 416
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 38/197 (19%)
Query: 187 LIQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKV 246
+ + K+ ++ E I E I +W G + + + + E+E+DK +V +T+ G +++V
Sbjct: 1 MAEIKVPELAESISEGTIAQWLKQ--PGDYVEQGEYLLELETDKVNVELTAEESGVLQEV 58
Query: 247 YYGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEP 306
GD VG+ + G +E A G S P + E++ +E
Sbjct: 59 LKDSGDTVQVGEII--------GTISEGA---------GESSAPAPTEKTESKESVKEEK 101
Query: 307 NKVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKEL 366
EP A + VS Q ++ K + +A+PS R++ + ID ++
Sbjct: 102 QA---EPAAQE------------VSEEAQ----SEAKSRTIASPSARKLAREKGIDLSQV 142
Query: 367 RGTGKQGRVLKEDIITY 383
GRV K+D+ Y
Sbjct: 143 PTGDPLGRVRKQDVEAY 159
Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 70/161 (43%), Gaps = 18/161 (11%)
Query: 447 LIQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKV 506
+ + + ++ E I E I +W G + + + + E+E+DK +V +T+ G +++V
Sbjct: 1 MAEIKVPELAESISEGTIAQWLKQ--PGDYVEQGEYLLELETDKVNVELTAEESGVLQEV 58
Query: 507 YYGEGDVALVGKPLLDIE---------VEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQ 557
GD VG+ + I E ++E+ +++A P EV+ S+
Sbjct: 59 LKDSGDTVQVGEIIGTISEGAGESSAPAPTEKTESKESVKEEKQAEPAAQEVSEEAQSEA 118
Query: 558 PNETLHKDPNK-------IDTKELRGTGKQGRVLKEDIITY 591
+ T+ + ID ++ GRV K+D+ Y
Sbjct: 119 KSRTIASPSARKLAREKGIDLSQVPTGDPLGRVRKQDVEAY 159
>sp|P45302|ODO2_HAEIN Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=sucB PE=3 SV=1
Length = 409
Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/471 (21%), Positives = 199/471 (42%), Gaps = 90/471 (19%)
Query: 448 IQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 507
I+ + D+ E + + + W+ + G + +V+ E+E+DK + + + G + +V
Sbjct: 3 IEILVPDLPESVADATVATWHKKL--GDTVKRDEVIVEIETDKVVLEVPALSDGVLAEVV 60
Query: 508 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKDPN 567
EG+ + + L I EG + S KA N P SD+ N + N
Sbjct: 61 QAEGETVVSKQLLGKISTAQEG----DVSSATLKA------TNEPTPSDRQNAAIENSHN 110
Query: 568 ----------------KIDTKELRGTGKQGRVLKEDIITYMNSPSDETNPAHTAHVREAS 611
+ +++G+G GR+ +EDI
Sbjct: 111 HNADQSPVIRRLLAEHDLQADQIQGSGVGGRLTREDI----------------------- 147
Query: 612 NVISIRGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSPSDETNPAHT 671
E+ Q + VK+E + +++ +
Sbjct: 148 ---------------------------EREIAKRQAQQVKQE-------AATEQNTISTV 173
Query: 672 AHVREASNVIPIRGYVKGMFKSMTEA-NTIPSLRLTEEVDTTQLRDVKNQVSALYQEKFR 730
A+ + +P+ K + + + EA N+ L EVD + ++ ++++
Sbjct: 174 AYSARSEKRVPMTRLRKRIAERLLEAKNSTAMLTTFNEVDMQPIMTLRKTYGEKFEKQHS 233
Query: 731 LKLTYMPFFIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPNIKSV 790
++L +M F+IKA+ + +P +NASID ++++ + +ISIA+ T GLV P ++
Sbjct: 234 VRLGFMSFYIKAVVEALKRYPEVNASID--GDDVVYHNYFDISIAVSTPRGLVTPVLRDC 291
Query: 791 NKLCLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVA 850
+KL + +I +++ + +GK+ D+ GG +++N G G + PII P Q I+
Sbjct: 292 DKLSMAEIEKQIKALAEKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILG 351
Query: 851 FGKIQLLPRFDAEMRIVAKCILNVTWAADHRVVDG-ATVARAATLWKSLEN 900
I+ P ++V + ++ + + DHR++DG +V T+ + LE+
Sbjct: 352 MHAIKERP-IALNGQVVIRPMMYLALSYDHRLIDGRESVGFLVTIKELLED 401
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
+ISIA+ T GLV P ++ +KLS+ +I +++ + +GK+ D+ GG +++N G
Sbjct: 272 DISIAVSTPRGLVTPVLRDCDKLSMAEIEKQIKALAEKGRDGKLTVEDLTGGNFTITNGG 331
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHRVVDGATVAR 1027
G + PII P Q I+ I+ P +VV + ++ + + DHR++DG
Sbjct: 332 VFGSLMSTPIINPPQSAILGMHAIKERP-IALNGQVVIRPMMYLALSYDHRLIDGRESVG 390
Query: 1028 AATLWKSLVENPALLLTQ 1045
K L+E+P LL +
Sbjct: 391 FLVTIKELLEDPTRLLLE 408
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 76/193 (39%), Gaps = 48/193 (24%)
Query: 188 IQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 247
I+ + D+ E + + + W+ + G + +V+ E+E+DK + + + G + +V
Sbjct: 3 IEILVPDLPESVADATVATWHKKL--GDTVKRDEVIVEIETDKVVLEVPALSDGVLAEVV 60
Query: 248 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPN 307
EG+ + + L I EG + S KA N P SD+ N + N
Sbjct: 61 QAEGETVVSKQLLGKISTAQEG----DVSSATLKA------TNEPTPSDRQNAAIENSHN 110
Query: 308 KVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELR 367
H D +P +RR++ +++ +++
Sbjct: 111 --------HNAD----------------------------QSPVIRRLLAEHDLQADQIQ 134
Query: 368 GTGKQGRVLKEDI 380
G+G GR+ +EDI
Sbjct: 135 GSGVGGRLTREDI 147
>sp|P35489|ODP2_ACHLA Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Acholeplasma laidlawii GN=pdhC
PE=1 SV=1
Length = 544
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 113/213 (53%), Gaps = 5/213 (2%)
Query: 680 VIPIRGYVKGMFKSMTEANTI-PSLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPF 738
V+ I K + +MT + +I P L +E++ L + +N+ L + K +KLTYM F
Sbjct: 317 VVKITRLRKAVSNAMTRSKSIIPETVLMDEINVDALVNFRNEAKGLAESK-GIKLTYMAF 375
Query: 739 FIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDI 798
KA+ + + E P+ NAS + + + + N+ +A+DT GL+VPNIK+ ++L + ++
Sbjct: 376 IAKAVLIALKEFPMFNASFNHDTDEVYIKKFINLGMAVDTPDGLIVPNIKNADRLSVFEL 435
Query: 799 TRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLP 858
++ + + K+ GGT +++N G+ G P+I ++ I+ GKI P
Sbjct: 436 ASQVRSLADDTIARKISMDQQTGGTFTITNFGSAGIAFGTPVINYPELAILGIGKIDRKP 495
Query: 859 RFDA-EMRIVAKCILNVTWAADHRVVDGATVAR 890
E++I L ++ A DHR++DGA R
Sbjct: 496 WVVGNEIKIA--HTLPLSLAVDHRIIDGADGGR 526
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 31/194 (15%)
Query: 187 LIQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKV 246
+ FK ADIGEGI E I +WN V G ++ E + + VE+DK + + S GT+ K+
Sbjct: 113 IYDFKFADIGEGIHEGTILQWNFKV--GDKVKEGETLVVVETDKVNAELPSPVDGTILKL 170
Query: 247 YYGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEP 306
EG+V VG+ ++ I + +L++ AP E EP
Sbjct: 171 GKAEGEVIHVGETVVLI--------GQNGATLEQAQAP-------------KAEAPVSEP 209
Query: 307 NKVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKEL 366
K + + +V+ D+ S + V++ K+LA+P R++ +D +
Sbjct: 210 KK--GAGVVGEIEVSDDIIGGS------EEVHVVATTGKVLASPVARKLASDLGVDIATI 261
Query: 367 RGTGKQGRVLKEDI 380
+G+G+QGRV+K+D+
Sbjct: 262 KGSGEQGRVMKDDV 275
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
N+ +A+DT GL+VPNIK+ ++LS+ ++ ++ + + K+ GGT +++N G
Sbjct: 408 NLGMAVDTPDGLIVPNIKNADRLSVFELASQVRSLADDTIARKISMDQQTGGTFTITNFG 467
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHRVVDGATVAR 1027
+ G P+I ++ I+ GKI P +A L ++ A DHR++DGA R
Sbjct: 468 SAGIAFGTPVINYPELAILGIGKIDRKPWVVGNEIKIAHT-LPLSLAVDHRIIDGADGGR 526
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 187 LIQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKV 246
+ +FK ADIGEGI E + +WN V G ++ E + + VE+DK + + S GT+ +
Sbjct: 1 MYEFKFADIGEGIHEGTVLQWNFKV--GDKVKEGETLVIVETDKVNAELPSPVDGTIVSL 58
Query: 247 YYGEGDVALVGKPLLDIE 264
EG+ VG+ ++ I+
Sbjct: 59 GAKEGEEIHVGQIIVTID 76
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 447 LIQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKV 506
+ +F ADIGEGI E + +WN V G ++ E + + VE+DK + + S GT+ +
Sbjct: 1 MYEFKFADIGEGIHEGTVLQWNFKV--GDKVKEGETLVIVETDKVNAELPSPVDGTIVSL 58
Query: 507 YYGEGDVALVGKPLLDIE 524
EG+ VG+ ++ I+
Sbjct: 59 GAKEGEEIHVGQIIVTID 76
>sp|Q92HK7|ODP2_RICCN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=pdhC PE=3 SV=1
Length = 412
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 206/441 (46%), Gaps = 56/441 (12%)
Query: 461 EVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYYGEGDVALVGKPL 520
E N+ W EG ++N +V+ E+E+DKA++ + + +G + K+ + + L
Sbjct: 16 EGNLARWLK--KEGDKVNPGEVIAEIETDKATMEVEAVDEGILAKIVIPQNSQNVPVNSL 73
Query: 521 LDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKDPNKIDTKELRGTGKQ 580
+ + + +EG + D+ +++ N+ S + + L K I E +Q
Sbjct: 74 IAV-LSEEGEEKTDIDAF-------IAKNNSVSPSPKTDANLPKPHENIANVE-----EQ 120
Query: 581 GRVLKEDIITYMNSPSDETNPAHTAHVREASNVISIRGYVKGMFKSMTEANTIPSLRLTE 640
V+K D+ SP + + + +IR F+S+ + P R+
Sbjct: 121 VTVIKHDVSRIFASP----------LAKRLAKMRNIR------FESVKGSG--PHGRIV- 161
Query: 641 EVDTTQLRDVKKEDIITYMNSPSDETNPAHTAHVREASNVIPIRGYVKGMFKSMTEA-NT 699
K+DI++Y +PS N + + E ++P K + K + E+ T
Sbjct: 162 -----------KQDILSY--TPSTAHNKIVSRNPEE-YRLVPNNNIRKIIAKRLLESKQT 207
Query: 700 IPSLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIKALSLCMTEHPILNASIDP 759
+P L+ E + +L D++ ++ + E +++ F I A++ + E P NAS
Sbjct: 208 VPHFYLSIECNVDKLLDIREDINKFFSEDKSTRISVNDFIILAVAKALQEVPNANASWG- 266
Query: 760 TQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLRIQGCSHEGKVLPRDI 819
++ I + +IS+A+ ++GLV P +K+ N+ +L+++RE+ + + + K+ P +
Sbjct: 267 -EDAIRYYNNVDISVAVAIENGLVTPIVKNANQKNILELSREMKALIKKAKDNKLTPEEF 325
Query: 820 QGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKI--QLLPRFDAEMRIVAKCILNVTWA 877
QGG ++SN+G G II P Q CI+ G + + + D +I I++VT +
Sbjct: 326 QGGGFTISNLGMYGIKNFNAIINPPQSCIMGVGASAKRAIVKND---QITIATIMDVTLS 382
Query: 878 ADHRVVDGATVARAATLWKSL 898
ADHRVVDGA A +K
Sbjct: 383 ADHRVVDGAVGAEFLVAFKKF 403
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
+IS+A+ ++GLV P +K+ N+ ++L+++RE+ + + + K+ P + QGG ++SN+G
Sbjct: 277 DISVAVAIENGLVTPIVKNANQKNILELSREMKALIKKAKDNKLTPEEFQGGGFTISNLG 336
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHRVVDGATVAR 1027
G II P Q CI+ G + +A I++VT +ADHRVVDGA A
Sbjct: 337 MYGIKNFNAIINPPQSCIMGVGASAKRAIVKNDQITIA-TIMDVTLSADHRVVDGAVGAE 395
Query: 1028 AATLWKSLVENPALLL 1043
+K +E+P L+L
Sbjct: 396 FLVAFKKFIESPVLML 411
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 36/202 (17%)
Query: 188 IQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 247
I+ + + + E N+ W EG ++N +V+ E+E+DKA++ + + +G + K+
Sbjct: 3 IKILMPALSPTMTEGNLARWLK--KEGDKVNPGEVIAEIETDKATMEVEAVDEGILAKIV 60
Query: 248 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTS---DQPNETLHK 304
+ + L+ + + +EG EE +D A S +P T +P+E +
Sbjct: 61 IPQNSQNVPVNSLIAV-LSEEG---EEKTDIDAFIAKNNSVSPSPKTDANLPKPHENIAN 116
Query: 305 EPNKVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTK 364
+V I H D+SR I A+P +R+ K I +
Sbjct: 117 VEEQVTV--IKH------DVSR-------------------IFASPLAKRLAKMRNIRFE 149
Query: 365 ELRGTGKQGRVLKEDIITYMNS 386
++G+G GR++K+DI++Y S
Sbjct: 150 SVKGSGPHGRIVKQDILSYTPS 171
>sp|Q68XI8|ODO2_RICTY Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia typhi
(strain ATCC VR-144 / Wilmington) GN=sucB PE=3 SV=1
Length = 398
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 112/210 (53%), Gaps = 8/210 (3%)
Query: 698 NTIPSLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIKALSLCMTEHPILNASI 757
NT L E+D +++ ++NQ +++K +KL +M FF+KA + P +NA I
Sbjct: 190 NTAAILTTFNEIDMSKVIALRNQYKEEFEKKHTVKLGFMSFFVKATIEALKLIPSINAEI 249
Query: 758 DPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLRIQGCSHEGKVLPR 817
D +++L ++I +A+ T+ GLVVP I+ +K+ DI + + + + EGK+
Sbjct: 250 D--GDDLLYKNYYDIGVAVGTEQGLVVPVIRDADKMSFADIEQAIGNLAKKAREGKLSIS 307
Query: 818 DIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLP-RFDAEMRIVAKCILNVTW 876
D+ GGT S+SN G G L PII P Q I+ K + D ++ I + ++ +
Sbjct: 308 DLSGGTFSISNGGVYGSLLSTPIINPPQSGILGLHKTEERAVVIDGKIEI--RPMMYIAL 365
Query: 877 AADHRVVDGATVARAATLWKSLENILVNPD 906
+ DHR++DG + ++N++ NP+
Sbjct: 366 SYDHRIIDG---KEGVSFLVKIKNLIENPE 392
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Query: 899 ENILVNPDHNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQG 958
+++L ++I +A+ T+ GLVVP I+ +K+S DI + + + + EGK+ D+ G
Sbjct: 252 DDLLYKNYYDIGVAVGTEQGLVVPVIRDADKMSFADIEQAIGNLAKKAREGKLSISDLSG 311
Query: 959 GTISMSNVGNVGGTLVQPIIVPRQVCIVAFGKIQLLP-RFDAEMRVVAKCILNVTWAADH 1017
GT S+SN G G L PII P Q I+ K + D ++ + + ++ + + DH
Sbjct: 312 GTFSISNGGVYGSLLSTPIINPPQSGILGLHKTEERAVVIDGKIEI--RPMMYIALSYDH 369
Query: 1018 RVVDGATVARAATLWKSLVENPALLL 1043
R++DG K+L+ENP LL
Sbjct: 370 RIIDGKEGVSFLVKIKNLIENPEKLL 395
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 95/221 (42%), Gaps = 58/221 (26%)
Query: 188 IQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 247
I+ + +GE + E I +W + + + +E + E+E+DK ++ + + GT+ K+
Sbjct: 3 IKIIIPSLGESVTEATIAKWYKKLGDAVKTDEL--LLEIETDKVTLEVNAPCNGTIGKIS 60
Query: 248 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPN 307
+G VG+ + +I +E+ DT+ N+ +E +
Sbjct: 61 KTDGANVTVGEEVGEI-----------------------NEIADTDTAWINNK--KQEVS 95
Query: 308 KVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELR 367
+ E + KP + + ILA PSV++++ ++D ++
Sbjct: 96 QHTSEQLVDKPAMASN----------------------ILA-PSVQKLVTENKLDPNNIK 132
Query: 368 GTGKQGRVLKEDIITYMNS--------PIDETNLAHTAHVR 400
GTG+ GR+ K D++ +N+ I++TN T VR
Sbjct: 133 GTGRGGRITKYDVLETINTTPITIETHAINKTNEERTQRVR 173
>sp|P65633|ODP2_MYCTU Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Mycobacterium tuberculosis
GN=dlaT PE=1 SV=1
Length = 553
Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%)
Query: 703 LRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIKALSLCMTEHPILNASIDPTQE 762
L T EVD T++ ++ + A + E+ + LT++PFF KA+ + HP +NAS + +
Sbjct: 342 LTQTHEVDMTKIVGLRARAKAAFAEREGVNLTFLPFFAKAVIDALKIHPNINASYNEDTK 401
Query: 763 NILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLRIQGCSHEGKVLPRDIQGG 822
I ++ A+DT+ GL+ P I L L + R + I + G + P ++ GG
Sbjct: 402 EITYYDAEHLGFAVDTEQGLLSPVIHDAGDLSLAGLARAIADIAARARSGNLKPDELSGG 461
Query: 823 TISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPR--FDA----EMRIVAKCILNVTW 876
T +++N+G+ G PI+VP Q ++ G I PR DA + + + C L +T+
Sbjct: 462 TFTITNIGSQGALFDTPILVPPQAAMLGTGAIVKRPRVVVDASGNESIGVRSVCYLPLTY 521
Query: 877 AADHRVVDGATVARAATLWK 896
DHR++DGA R T K
Sbjct: 522 --DHRLIDGADAGRFLTTIK 539
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 8/141 (5%)
Query: 907 HNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNV 966
++ A+DT+ GL+ P I LSL + R + I + G + P ++ GGT +++N+
Sbjct: 409 EHLGFAVDTEQGLLSPVIHDAGDLSLAGLARAIADIAARARSGNLKPDELSGGTFTITNI 468
Query: 967 GNVGGTLVQPIIVPRQVCIVAFGKIQLLPR--FDA----EMRVVAKCILNVTWAADHRVV 1020
G+ G PI+VP Q ++ G I PR DA + V + C L +T+ DHR++
Sbjct: 469 GSQGALFDTPILVPPQAAMLGTGAIVKRPRVVVDASGNESIGVRSVCYLPLTY--DHRLI 526
Query: 1021 DGATVARAATLWKSLVENPAL 1041
DGA R T K +E A
Sbjct: 527 DGADAGRFLTTIKHRLEEGAF 547
>sp|P65634|ODP2_MYCBO Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=dlaT PE=3 SV=1
Length = 553
Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 8/200 (4%)
Query: 703 LRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIKALSLCMTEHPILNASIDPTQE 762
L T EVD T++ ++ + A + E+ + LT++PFF KA+ + HP +NAS + +
Sbjct: 342 LTQTHEVDMTKIVGLRARAKAAFAEREGVNLTFLPFFAKAVIDALKIHPNINASYNEDTK 401
Query: 763 NILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLRIQGCSHEGKVLPRDIQGG 822
I ++ A+DT+ GL+ P I L L + R + I + G + P ++ GG
Sbjct: 402 EITYYDAEHLGFAVDTEQGLLSPVIHDAGDLSLAGLARAIADIAARARSGNLKPDELSGG 461
Query: 823 TISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPR--FDA----EMRIVAKCILNVTW 876
T +++N+G+ G PI+VP Q ++ G I PR DA + + + C L +T+
Sbjct: 462 TFTITNIGSQGALFDTPILVPPQAAMLGTGAIVKRPRVVVDASGNESIGVRSVCYLPLTY 521
Query: 877 AADHRVVDGATVARAATLWK 896
DHR++DGA R T K
Sbjct: 522 --DHRLIDGADAGRFLTTIK 539
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 8/141 (5%)
Query: 907 HNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNV 966
++ A+DT+ GL+ P I LSL + R + I + G + P ++ GGT +++N+
Sbjct: 409 EHLGFAVDTEQGLLSPVIHDAGDLSLAGLARAIADIAARARSGNLKPDELSGGTFTITNI 468
Query: 967 GNVGGTLVQPIIVPRQVCIVAFGKIQLLPR--FDA----EMRVVAKCILNVTWAADHRVV 1020
G+ G PI+VP Q ++ G I PR DA + V + C L +T+ DHR++
Sbjct: 469 GSQGALFDTPILVPPQAAMLGTGAIVKRPRVVVDASGNESIGVRSVCYLPLTY--DHRLI 526
Query: 1021 DGATVARAATLWKSLVENPAL 1041
DGA R T K +E A
Sbjct: 527 DGADAGRFLTTIKHRLEEGAF 547
>sp|Q9ZD20|ODP2_RICPR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia prowazekii (strain
Madrid E) GN=pdhC PE=3 SV=1
Length = 408
Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 203/448 (45%), Gaps = 59/448 (13%)
Query: 459 IREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYYGEGDVALVGK 518
+RE N+ W EG ++N +V+ E+E+DKA++ + S +G + K+ + +
Sbjct: 14 MREGNLARWLK--KEGDKVNPGEVIAEIETDKATMEVESVDEGILAKIIIPQNSQNVPVN 71
Query: 519 PLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKDPNKIDTKELRGTG 578
L+ + + +EG + DS +++ N+ S + + TL K + I T
Sbjct: 72 SLIAV-LSEEGEDKADIDSF-------IAQNNSVSLSLKTDATLKKSNDSI-------TN 116
Query: 579 KQGRVLKEDIITYMNSPSDETNPAHTAHVREASNVISIRGYVKGMFKSMTEANTIPSLRL 638
+G ++ SN I K + K I +RL
Sbjct: 117 VEG-------------------------IKHDSNKIFASPLAKRLAK-------IGDIRL 144
Query: 639 TEEVDTTQLRDVKKEDIITYMNSPSDETNPAHTAHVREASNVIPIRGYVKGMFKSMTEA- 697
+ + K+DI++Y +S S +N E +V P K + K + E+
Sbjct: 145 ENVQGSGPHGRIVKQDILSYDSSTS--SNKIVYRDTEEYRSV-PNNNIRKIIAKRLLESK 201
Query: 698 NTIPSLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIKALSLCMTEHPILNASI 757
T+P L+ E + +L DV+ ++ + E K++ F I A++ + E P NAS
Sbjct: 202 QTVPHFYLSIECNVDKLLDVREDINKSFSEDKVTKISVNDFIILAVAKALQEVPNANASW 261
Query: 758 DPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLRIQGCSHEGKVLPR 817
+++ I + +IS+A+ ++G+V P +K NK +++++RE+ + + + K+ P
Sbjct: 262 --SEDAIRYYNNVDISVAVAIENGIVTPIVKDANKKNIIELSREMKTLIKKAKDNKLTPI 319
Query: 818 DIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPRFDAEMRIVAKCILNVTWA 877
+ QGG ++SN+G G II Q CI+ G + I+A I++VT +
Sbjct: 320 EFQGGGFTISNLGMYGIKNFNAIINTPQSCIMGVGASTKRAIVKNDQIIIA-TIMDVTLS 378
Query: 878 ADHRVVDGATVARAATLWKSLENILVNP 905
ADHRV+DGA +A S + + NP
Sbjct: 379 ADHRVIDGAV---SAEFLASFKRFIENP 403
Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 78/136 (57%), Gaps = 1/136 (0%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
+IS+A+ ++G+V P +K NK ++++++RE+ + + + K+ P + QGG ++SN+G
Sbjct: 273 DISVAVAIENGIVTPIVKDANKKNIIELSREMKTLIKKAKDNKLTPIEFQGGGFTISNLG 332
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHRVVDGATVAR 1027
G II Q CI+ G + ++A I++VT +ADHRV+DGA A
Sbjct: 333 MYGIKNFNAIINTPQSCIMGVGASTKRAIVKNDQIIIA-TIMDVTLSADHRVIDGAVSAE 391
Query: 1028 AATLWKSLVENPALLL 1043
+K +ENP L+L
Sbjct: 392 FLASFKRFIENPVLML 407
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 36/189 (19%)
Query: 199 IREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYYGEGDVALVGK 258
+RE N+ W EG ++N +V+ E+E+DKA++ + S +G + K+ + +
Sbjct: 14 MREGNLARWLK--KEGDKVNPGEVIAEIETDKATMEVESVDEGILAKIIIPQNSQNVPVN 71
Query: 259 PLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPNKV-NREPIAHK 317
L+ + + +EG + DS +++ N+ S + + TL K + + N E I H
Sbjct: 72 SLIAV-LSEEGEDKADIDSF-------IAQNNSVSLSLKTDATLKKSNDSITNVEGIKHD 123
Query: 318 PDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELRGTGKQGRVLK 377
+ KI A+P +R+ K +I + ++G+G GR++K
Sbjct: 124 SN-------------------------KIFASPLAKRLAKIGDIRLENVQGSGPHGRIVK 158
Query: 378 EDIITYMNS 386
+DI++Y +S
Sbjct: 159 QDILSYDSS 167
>sp|P57302|ODP2_BUCAI Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=aceF PE=3 SV=1
Length = 396
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 105/197 (53%), Gaps = 3/197 (1%)
Query: 700 IPSLRLTEEVDTTQLRDVKNQVS--ALYQEKFRLKLTYMPFFIKALSLCMTEHPILNASI 757
IP + +EVD T L + + + Q+K +T + F IK ++ + + PI N+S+
Sbjct: 188 IPHVTQFDEVDITILEKFRQKYNNEKRNQKKTNENITILVFIIKVVAYALEKFPIFNSSL 247
Query: 758 DPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLRIQGCSHEGKVLPR 817
+ + I++ NI AID + L VP +K VNK + ++ EL+ + + K+
Sbjct: 248 NINNKKIILKKYINIGFAIDVNNDLFVPVLKDVNKKNIKQLSSELILLSEKARTRKLNIE 307
Query: 818 DIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPRFDAEMRIVAKCILNVTWA 877
D+ GG ++SN+G +GG+ PII +V I+ K Q+ P ++ + + +L ++ +
Sbjct: 308 DMTGGCFTISNLGGIGGSWFSPIINSPEVAILGISKSQIKPSWNGK-EFIPSLMLPLSLS 366
Query: 878 ADHRVVDGATVARAATL 894
DHRV++GA AR T
Sbjct: 367 YDHRVINGAYAARFITF 383
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 1/136 (0%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
NI AID + L VP +K VNK ++ ++ EL+ + + K+ D+ GG ++SN+G
Sbjct: 261 NIGFAIDVNNDLFVPVLKDVNKKNIKQLSSELILLSEKARTRKLNIEDMTGGCFTISNLG 320
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHRVVDGATVAR 1027
+GG+ PII +V I+ K Q+ P ++ + + +L ++ + DHRV++GA AR
Sbjct: 321 GIGGSWFSPIINSPEVAILGISKSQIKPSWNGK-EFIPSLMLPLSLSYDHRVINGAYAAR 379
Query: 1028 AATLWKSLVENPALLL 1043
T ++ + L+
Sbjct: 380 FITFISRVLSDMHFLI 395
Score = 37.0 bits (84), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 348 ATPSVRRMIKHYEIDTKELRGTGKQGRVLKEDIITY 383
ATP +RR+ ++ I+ ++ GTG + R+LKED+ Y
Sbjct: 105 ATPLIRRLARNLNINLYDVVGTGPKNRILKEDLDLY 140
>sp|Q1RJT3|ODP2_RICBR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia bellii (strain
RML369-C) GN=pdhC PE=3 SV=1
Length = 418
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 201/441 (45%), Gaps = 57/441 (12%)
Query: 461 EVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYYGEGDVALVGKPL 520
E N+ W EG +IN +V+ E+E+DKA++ + + +GT+ K+ +G + L
Sbjct: 16 EGNLARWLK--KEGDKINPGEVIAEIETDKATMEVEAVDEGTLAKIIIPQGSQNVPVNSL 73
Query: 521 LDIEVED--EGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKDPNKIDTKELRGTG 578
+ + +E+ E EE + + +P E++ P + P
Sbjct: 74 IAVLIEEGEELSGIEEFIAKNNSNSPKKEEISKPAETIAPQN------------------ 115
Query: 579 KQGRVLKEDIITYMNSPSDETNPAHTAHVREASNVISIRGYVKGMFKSMTEANTIPSLRL 638
+KE+ IT + SD+ N I+ + + K + + I ++R+
Sbjct: 116 -----VKEENIT---TASDQNN---------------IKVFASPLAKRLAK---IQNVRI 149
Query: 639 TEEVDTTQLRDVKKEDIITYMNSPSDETNPAHTAHVREASNVIPIRGYVKGMFKSMTEA- 697
E + + K+D++++ +N + + E + P K + K + E+
Sbjct: 150 EEIKGSGPHGRIIKQDVLSHKGGSKALSNKIVSRNPEE-YRLAPNNNIRKIIAKRLLESK 208
Query: 698 NTIPSLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIKALSLCMTEHPILNASI 757
T+P L+ E + +L D++ ++ + + K++ F I A++ + E P NAS
Sbjct: 209 QTVPHFYLSIECNVDKLLDIREDINKSFGDDKSAKISVNDFIILAVAKALQEVPNANASW 268
Query: 758 DPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLRIQGCSHEGKVLPR 817
N D IS+A+ ++GLV P I++ ++ ++D++ E+ + + E K+ P
Sbjct: 269 GDDAIRYYNNVD--ISVAVAIENGLVTPIIRNADQKNIVDLSSEMKGLIKKARENKLTPE 326
Query: 818 DIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKI--QLLPRFDAEMRIVAKCILNVT 875
+ QGG ++SN+G G II P Q CI+ G + + + D +I I++VT
Sbjct: 327 EFQGGGFTISNLGMYGIKNFNAIINPPQSCIMGVGSSSKRAIVKND---QISIATIMDVT 383
Query: 876 WAADHRVVDGATVARAATLWK 896
+ADHRVVDGA A +K
Sbjct: 384 LSADHRVVDGAVGAEFLAAFK 404
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 80/143 (55%), Gaps = 15/143 (10%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
+IS+A+ ++GLV P I++ ++ +++D++ E+ + + E K+ P + QGG ++SN+G
Sbjct: 280 DISVAVAIENGLVTPIIRNADQKNIVDLSSEMKGLIKKARENKLTPEEFQGGGFTISNLG 339
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAK-------CILNVTWAADHRVV 1020
G II P Q CI+ G + R + K I++VT +ADHRVV
Sbjct: 340 MYGIKNFNAIINPPQSCIMGVG--------SSSKRAIVKNDQISIATIMDVTLSADHRVV 391
Query: 1021 DGATVARAATLWKSLVENPALLL 1043
DGA A +K +E+PAL+L
Sbjct: 392 DGAVGAEFLAAFKRFIESPALML 414
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 29/196 (14%)
Query: 188 IQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 247
I+ + + + E N+ W EG +IN +V+ E+E+DKA++ + + +GT+ K+
Sbjct: 3 IKLLMPALSPTMTEGNLARWLK--KEGDKINPGEVIAEIETDKATMEVEAVDEGTLAKII 60
Query: 248 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPN 307
+G + L+ + +E+ EE ++ A S + +P ET+ P
Sbjct: 61 IPQGSQNVPVNSLIAVLIEE----GEELSGIEEFIAKNNSNSPKKEEISKPAETIA--PQ 114
Query: 308 KVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELR 367
V E I D +N K+ A+P +R+ K + +E++
Sbjct: 115 NVKEENITTASD---------------------QNNIKVFASPLAKRLAKIQNVRIEEIK 153
Query: 368 GTGKQGRVLKEDIITY 383
G+G GR++K+D++++
Sbjct: 154 GSGPHGRIIKQDVLSH 169
>sp|Q9ZDY4|ODO2_RICPR Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia
prowazekii (strain Madrid E) GN=sucB PE=3 SV=1
Length = 401
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 123/245 (50%), Gaps = 14/245 (5%)
Query: 664 DETNPAHTAHVREASNVIPIRGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKNQVSA 723
++TN T VR + +R + K NT L E+D +++ ++NQ
Sbjct: 165 NKTNEERTQRVRMSR----LRKTIAQRLKD--SQNTAAILTTFNEIDMSKVIALRNQYKE 218
Query: 724 LYQEKFRLKLTYMPFFIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLV 783
+++K +KL +M FF+KA + P +NA ID +++L ++I +A+ T GLV
Sbjct: 219 EFEKKHTVKLGFMSFFVKATIEALKLIPSINAEID--GDDLLYKNYYDIGVAVGTDQGLV 276
Query: 784 VPNIKSVNKLCLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVP 843
VP ++ +K+ D+ + + + + EGK+ D+ GGT S+SN G G L PII P
Sbjct: 277 VPVVRDADKMGFADVEQAIGDLAKKAREGKLSMSDLSGGTFSISNGGVYGSLLSTPIINP 336
Query: 844 GQVCIVAFGKIQLLP-RFDAEMRIVAKCILNVTWAADHRVVDGATVARAATLWKSLENIL 902
Q I+ K + D ++ I + ++ + + DHR++DG + ++N++
Sbjct: 337 PQSGILGLHKTEERAVVIDGKIEI--RPMMYIALSYDHRIIDG---KEGVSFLVKIKNLI 391
Query: 903 VNPDH 907
NP+
Sbjct: 392 ENPEK 396
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 23/156 (14%)
Query: 899 ENILVNPDHNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQG 958
+++L ++I +A+ T GLVVP ++ +K+ D+ + + + + EGK+ D+ G
Sbjct: 255 DDLLYKNYYDIGVAVGTDQGLVVPVVRDADKMGFADVEQAIGDLAKKAREGKLSMSDLSG 314
Query: 959 GTISMSNVGNVGGTLVQPIIVPRQVCIVAF-----------GKIQLLPRFDAEMRVVAKC 1007
GT S+SN G G L PII P Q I+ GKI++ P
Sbjct: 315 GTFSISNGGVYGSLLSTPIINPPQSGILGLHKTEERAVVIDGKIEIRP------------ 362
Query: 1008 ILNVTWAADHRVVDGATVARAATLWKSLVENPALLL 1043
++ + + DHR++DG K+L+ENP LL
Sbjct: 363 MMYIALSYDHRIIDGKEGVSFLVKIKNLIENPEKLL 398
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 57/222 (25%)
Query: 188 IQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 247
++ + +GE + E I +W + + + +E + E+E++K ++ + + GT+ K+
Sbjct: 3 VKIIIPSLGESVTEATIAKWYKKLGDSVKTDEL--LLEIETEKVTLEVNAPCNGTIEKIA 60
Query: 248 YGEGDVALVGKPLLDI-EVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEP 306
+G VG+ + +I EV D A +S ++A H
Sbjct: 61 KTDGANVTVGEEIGEINEVVDTDTACTNNNSYKKQAI-----------------VQH--- 100
Query: 307 NKVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKEL 366
+ E I KP + + ILA PSV++++ ++D +
Sbjct: 101 ---DSEQIVDKPASSSN----------------------ILA-PSVQKLVTENKLDPNNI 134
Query: 367 RGTGKQGRVLKEDIITYMNS--------PIDETNLAHTAHVR 400
+GTG+ GR+ K D++ +N+ +++TN T VR
Sbjct: 135 KGTGRGGRITKCDVLETINTTPVTIETPALNKTNEERTQRVR 176
>sp|Q4ULG1|ODP2_RICFE Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=pdhC PE=3 SV=1
Length = 412
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 202/442 (45%), Gaps = 58/442 (13%)
Query: 461 EVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYYGEGDVALVGKPL 520
E N+ W EG ++N +V+ E+E+DKA++ + + +G + K+ + + L
Sbjct: 16 EGNLARWLK--KEGDKVNPGEVIAEIETDKATMEVEAVDEGILAKIVIPQNSQNVPVNSL 73
Query: 521 LDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTS---DQPNETLHKDPNKIDTKELRGT 577
+ + + +EG EE +D A + +P T +P+E + K
Sbjct: 74 IAV-LSEEG---EEKTDIDAFIAKNNNVSPSPKTDANLPKPHENIAK------------V 117
Query: 578 GKQGRVLKEDIITYMNSPSDETNPAHTAHVREASNVISIRGYVKGMFKSMTEANTIPSLR 637
+Q V+K D SP + A ++R S VKG + P R
Sbjct: 118 EEQVAVIKHDASKIFASPLAK-RLAKMGNIRLES--------VKG---------SGPHGR 159
Query: 638 LTEEVDTTQLRDVKKEDIITYMNSPSDETNPAHTAHVREASNVIPIRGYVKGMFKSMTEA 697
+ K+DI++Y +PS N + + E ++P K + K + E+
Sbjct: 160 IV------------KQDILSY--TPSTVHNKIVSRNPEE-YRLVPNNNIRKIIAKRLLES 204
Query: 698 -NTIPSLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIKALSLCMTEHPILNAS 756
T+P L+ E + +L D++ ++ + E +++ F I A++ + E P NAS
Sbjct: 205 KQTVPHFYLSIECNVDKLLDIREDINKSFSEDKSTRISVNDFIILAVAKALQELPNANAS 264
Query: 757 IDPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLRIQGCSHEGKVLP 816
++ I + + +IS+A+ ++GLV P +K+ N+ +++++RE+ + + + K+ P
Sbjct: 265 WG--EDAIRYHNNVDISVAVAIENGLVTPIVKNANQKNIIELSREMKELIKKAKDNKLTP 322
Query: 817 RDIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPRFDAEMRIVAKCILNVTW 876
+ QGG ++SN+G G II P Q CI+ G + +A I++VT
Sbjct: 323 EEFQGGGFTISNLGMYGIKNFNAIINPPQSCIMGVGASAKRAIVKNDQVTIA-TIMDVTL 381
Query: 877 AADHRVVDGATVARAATLWKSL 898
+ADHRVVDGA A +K
Sbjct: 382 SADHRVVDGAVGAEFLAAFKKF 403
Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
+IS+A+ ++GLV P +K+ N+ ++++++RE+ + + + K+ P + QGG ++SN+G
Sbjct: 277 DISVAVAIENGLVTPIVKNANQKNIIELSREMKELIKKAKDNKLTPEEFQGGGFTISNLG 336
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHRVVDGATVAR 1027
G II P Q CI+ G + +A I++VT +ADHRVVDGA A
Sbjct: 337 MYGIKNFNAIINPPQSCIMGVGASAKRAIVKNDQVTIA-TIMDVTLSADHRVVDGAVGAE 395
Query: 1028 AATLWKSLVENPALLL 1043
+K +E+PAL+L
Sbjct: 396 FLAAFKKFIESPALML 411
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 87/191 (45%), Gaps = 36/191 (18%)
Query: 201 EVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYYGEGDVALVGKPL 260
E N+ W EG ++N +V+ E+E+DKA++ + + +G + K+ + + L
Sbjct: 16 EGNLARWLK--KEGDKVNPGEVIAEIETDKATMEVEAVDEGILAKIVIPQNSQNVPVNSL 73
Query: 261 LDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTS---DQPNETLHKEPNKVNREPIAHK 317
+ + + +EG EE +D A + +P T +P+E + K +V
Sbjct: 74 IAV-LSEEG---EEKTDIDAFIAKNNNVSPSPKTDANLPKPHENIAKVEEQV-------- 121
Query: 318 PDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELRGTGKQGRVLK 377
+ + H + KI A+P +R+ K I + ++G+G GR++K
Sbjct: 122 ----------AVIKH---------DASKIFASPLAKRLAKMGNIRLESVKGSGPHGRIVK 162
Query: 378 EDIITYMNSPI 388
+DI++Y S +
Sbjct: 163 QDILSYTPSTV 173
>sp|P36957|ODO2_HUMAN Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex, mitochondrial
OS=Homo sapiens GN=DLST PE=1 SV=4
Length = 453
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 107/212 (50%), Gaps = 12/212 (5%)
Query: 698 NTIPSLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIKALSLCMTEHPILNASI 757
NT L E+D + +++++ + + +K LKL +M F+KA + + E P++NA I
Sbjct: 243 NTCAMLTTFNEIDMSNIQEMRARHKEAFLKKHNLKLGFMSAFVKASAFALQEQPVVNAVI 302
Query: 758 DPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLRIQGCSHEGKVLPR 817
D T + ++ +IS+A+ T GLVVP I++V + DI R + + + + ++
Sbjct: 303 DDTTKEVVYRDYIDISVAVATPRGLVVPVIRNVEAMNFADIERTITELGEKARKNELAIE 362
Query: 818 DIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPRFDAEMRIVAKC----ILN 873
D+ GGT ++SN G G PII P Q I+ I FD + I K ++
Sbjct: 363 DMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHGI-----FDRPVAIGGKVEVRPMMY 417
Query: 874 VTWAADHRVVDGATVARAATLWKSLENILVNP 905
V DHR++DG A T + ++ + +P
Sbjct: 418 VALTYDHRLIDG---REAVTFLRKIKAAVEDP 446
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 9/140 (6%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
+IS+A+ T GLVVP I++V ++ DI R + + + + ++ D+ GGT ++SN G
Sbjct: 316 DISVAVATPRGLVVPVIRNVEAMNFADIERTITELGEKARKNELAIEDMDGGTFTISNGG 375
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKC----ILNVTWAADHRVVDGA 1023
G PII P Q I+ I FD + + K ++ V DHR++DG
Sbjct: 376 VFGSLFGTPIINPPQSAILGMHGI-----FDRPVAIGGKVEVRPMMYVALTYDHRLIDGR 430
Query: 1024 TVARAATLWKSLVENPALLL 1043
K+ VE+P +LL
Sbjct: 431 EAVTFLRKIKAAVEDPRVLL 450
Score = 38.9 bits (89), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 180 TSCIRHKLIQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRY 239
T+ + L+ K E + E +++ W V G + E +VVCE+E+DK SV + S
Sbjct: 63 TAVCKDDLVTVKTPAFAESVTEGDVR-WEKAV--GDTVAEDEVVCEIETDKTSVQVPSPA 119
Query: 240 KGTVRKVYYGEGDVALVGKPLLDI 263
G + + +G G PL +
Sbjct: 120 NGVIEALLVPDGGKVEGGTPLFTL 143
Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 440 TSCIRHKLIQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRY 499
T+ + L+ E + E +++ W V G + E +VVCE+E+DK SV + S
Sbjct: 63 TAVCKDDLVTVKTPAFAESVTEGDVR-WEKAV--GDTVAEDEVVCEIETDKTSVQVPSPA 119
Query: 500 KGTVRKVYYGEGDVALVGKPLLDI 523
G + + +G G PL +
Sbjct: 120 NGVIEALLVPDGGKVEGGTPLFTL 143
>sp|Q8GCY1|ODO2_BARVB Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Bartonella
vinsonii subsp. berkhofii GN=sucB PE=3 SV=1
Length = 411
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 110/210 (52%), Gaps = 6/210 (2%)
Query: 698 NTIPSLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIKALSLCMTEHPILNASI 757
NT L EVD + + ++ + L+++K +KL +M FF KA+ + E P +NA I
Sbjct: 203 NTAAMLTTFNEVDMSAVMGLRKRYKDLFEKKHGVKLGFMGFFTKAVCHALKELPAVNAEI 262
Query: 758 DPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLRIQGCSHEGKVLPR 817
D T +I+ N IA+ T GLVVP ++ +++ L +I +E+ R+ + +GK+
Sbjct: 263 DGT--DIIYKNYVNAGIAVGTDKGLVVPVVRDADQMSLAEIEKEIGRLGRLARDGKLAVS 320
Query: 818 DIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPRFDAEMRIVAKCILNVTWA 877
D+QGGT +++N G G + PI+ Q I+ I+ + +I + ++ + +
Sbjct: 321 DMQGGTFTITNGGVYGSLMSTPILNAPQSGILGMHAIKERAMV-VDGQIAIRPMMYLALS 379
Query: 878 ADHRVVDGATVARAATLWKSLENILVNPDH 907
DHR+VDG A T ++ L +P+
Sbjct: 380 YDHRIVDG---QEAVTFLVRVKESLEDPER 406
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 72/136 (52%), Gaps = 1/136 (0%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
N IA+ T GLVVP ++ +++SL +I +E+ R+ + +GK+ D+QGGT +++N G
Sbjct: 274 NAGIAVGTDKGLVVPVVRDADQMSLAEIEKEIGRLGRLARDGKLAVSDMQGGTFTITNGG 333
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHRVVDGATVAR 1027
G + PI+ Q I+ I+ + ++ + ++ + + DHR+VDG
Sbjct: 334 VYGSLMSTPILNAPQSGILGMHAIKERAMV-VDGQIAIRPMMYLALSYDHRIVDGQEAVT 392
Query: 1028 AATLWKSLVENPALLL 1043
K +E+P L+
Sbjct: 393 FLVRVKESLEDPERLV 408
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Query: 455 IGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYYGEGDVA 514
+GE + E + +W + E I+E + E+E+DK +V + S G + ++ EGD
Sbjct: 10 LGESVTEATVGKWFKKLGEAVAIDE--PLVELETDKVTVEVPSPVAGKLFEIIAKEGDTV 67
Query: 515 LVGKPLLDIEVEDEGVA-AEEADSLDRKAAPGVSEVNTPDTSDQPNETLHK--DPNKIDT 571
V L +E VA + + AAP E ++ + P + K N I
Sbjct: 68 EVNALLGAVEAGAASVAKSPSSSETSVSAAPSELEQSSSSNTMPPAPSAAKLMAENNIAK 127
Query: 572 KELRGTGKQGRVLKEDIITYM 592
++ G+GK+G++LKED++ +
Sbjct: 128 SDILGSGKRGQILKEDVLNVL 148
Score = 33.9 bits (76), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 77/196 (39%), Gaps = 51/196 (26%)
Query: 189 QFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYY 248
+ ++ +GE + E + +W + E I+E + E+E+DK +V + S G + ++
Sbjct: 4 EIRVPTLGESVTEATVGKWFKKLGEAVAIDE--PLVELETDKVTVEVPSPVAGKLFEII- 60
Query: 249 GEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPNK 308
A+E D+++ A G E +
Sbjct: 61 -----------------------AKEGDTVEVNALLGAVEAGAASVA------------- 84
Query: 309 VNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELRG 368
K + + S +A S L Q + N + PS +++ I ++ G
Sbjct: 85 --------KSPSSSETSVSAAPSELEQSSSSNT----MPPAPSAAKLMAENNIAKSDILG 132
Query: 369 TGKQGRVLKEDIITYM 384
+GK+G++LKED++ +
Sbjct: 133 SGKRGQILKEDVLNVL 148
>sp|Q4UKI7|ODO2_RICFE Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=sucB PE=3 SV=1
Length = 401
Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 132/267 (49%), Gaps = 22/267 (8%)
Query: 650 VKKEDIITYMNSPS--------DETNPAHTAHVREASNVIPIRGYVKGMFKSMTEANTIP 701
+ K D++ +N+PS ++TN VR + +R + K NT
Sbjct: 143 ITKGDVLETINTPSAATSTPTVNKTNEERVQRVRMSR----LRKTIAQRLKD--SQNTAA 196
Query: 702 SLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIKALSLCMTEHPILNASIDPTQ 761
L E+D +++ ++NQ +++K +KL +M FF+KA + P +NA ID
Sbjct: 197 ILTTFNEIDMSKVIALRNQYKEEFEKKHLVKLGFMSFFVKATIEALKLIPSVNAEID--G 254
Query: 762 ENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLRIQGCSHEGKVLPRDIQG 821
++++ ++I +A+ T+ GLVVP ++ +K+ ++ + + + + EGK+ D+ G
Sbjct: 255 DDLVYKNYYDIGVAVGTEQGLVVPVVRDADKMGFAEVEKAIGTLAKKAREGKLSMADLSG 314
Query: 822 GTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLP-RFDAEMRIVAKCILNVTWAADH 880
GT S+SN G G L PII P Q I+ K + D ++ I + ++ + + DH
Sbjct: 315 GTFSISNGGVYGSLLSTPIINPPQSGILGLHKTEERAVVIDGKIEI--RPMMYIALSYDH 372
Query: 881 RVVDGATVARAATLWKSLENILVNPDH 907
R++DG + ++ ++ NP+
Sbjct: 373 RIIDG---KEGVSFLVKIKELIENPEK 396
Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 23/148 (15%)
Query: 907 HNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNV 966
++I +A+ T+ GLVVP ++ +K+ ++ + + + + EGK+ D+ GGT S+SN
Sbjct: 263 YDIGVAVGTEQGLVVPVVRDADKMGFAEVEKAIGTLAKKAREGKLSMADLSGGTFSISNG 322
Query: 967 GNVGGTLVQPIIVPRQVCIVAF-----------GKIQLLPRFDAEMRVVAKCILNVTWAA 1015
G G L PII P Q I+ GKI++ P ++ + +
Sbjct: 323 GVYGSLLSTPIINPPQSGILGLHKTEERAVVIDGKIEIRP------------MMYIALSY 370
Query: 1016 DHRVVDGATVARAATLWKSLVENPALLL 1043
DHR++DG K L+ENP LL
Sbjct: 371 DHRIIDGKEGVSFLVKIKELIENPEKLL 398
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 21/159 (13%)
Query: 455 IGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYYGEGDVA 514
+GE + E I +W EG + +++ E+E++K ++ + + GT+ K+ +G
Sbjct: 10 LGESVTEATIAKWYKK--EGDPVKTDELLLEIETEKVTLEVNAPCDGTIGKISKTDGANV 67
Query: 515 LVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNE-----------TLH 563
VG+ + +I +EG AA A + + A ++ T TS++P E ++
Sbjct: 68 AVGEEIGEI---NEGAAANTAGTNNESAK---AQAVTQPTSEKPVEKPAVVNNILAPSVQ 121
Query: 564 K--DPNKIDTKELRGTGKQGRVLKEDIITYMNSPSDETN 600
K NK+D ++GTG+ GR+ K D++ +N+PS T+
Sbjct: 122 KLVTENKLDPNNIKGTGRDGRITKGDVLETINTPSAATS 160
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 99/221 (44%), Gaps = 55/221 (24%)
Query: 188 IQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVY 247
++ + +GE + E I +W EG + +++ E+E++K ++ + + GT+ K+
Sbjct: 3 VKIIVPSLGESVTEATIAKWYKK--EGDPVKTDELLLEIETEKVTLEVNAPCDGTIGKIS 60
Query: 248 YGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPN 307
+G VG+ + +I +EG AA A + + A ++ T TS++P E +P
Sbjct: 61 KTDGANVAVGEEIGEI---NEGAAANTAGTNNESAK---AQAVTQPTSEKPVE----KPA 110
Query: 308 KVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELR 367
VN ILA PSV++++ ++D ++
Sbjct: 111 VVNN----------------------------------ILA-PSVQKLVTENKLDPNNIK 135
Query: 368 GTGKQGRVLKEDIITYMNSP--------IDETNLAHTAHVR 400
GTG+ GR+ K D++ +N+P +++TN VR
Sbjct: 136 GTGRDGRITKGDVLETINTPSAATSTPTVNKTNEERVQRVR 176
>sp|P19262|ODO2_YEAST Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=KGD2 PE=1 SV=2
Length = 463
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 190/463 (41%), Gaps = 76/463 (16%)
Query: 444 RHKLIQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTV 503
R K + + E + E ++KE+ NV G I E +++ +E+DK + + S GTV
Sbjct: 70 RFKSTSIEVPPMAESLTEGSLKEYTKNV--GDFIKEDELLATIETDKIDIEVNSPVSGTV 127
Query: 504 RKVYYGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLH 563
K L+ + ED EE ++ AP +P T
Sbjct: 128 TK---------------LNFKPEDTVTVGEELAQVEPGEAPAEG-----SGESKPEPTEQ 167
Query: 564 KDPNKIDTKELRGTGKQGRVLKEDIITYMNSPSDETNPAHTAHVREASNVISIRGYVKGM 623
+P+ QG +E NS + + A +EA+
Sbjct: 168 AEPS------------QGVAARE------NSSEETASKKEAAPKKEAA------------ 197
Query: 624 FKSMTEANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSPSDETNPAHTAHVREASNVIPI 683
P +TE Q + ++ P +N + T R + V
Sbjct: 198 ----------PKKEVTEPKKADQPKKT-----VSKAQEPPVASN-SFTPFPRTETRVKMN 241
Query: 684 RGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIKAL 743
R ++ + NT SL EVD + L +++ +K K +M F KA
Sbjct: 242 RMRLRIAERLKESQNTAASLTTFNEVDMSALMEMRKLYKDEIIKKTGTKFGFMGLFSKAC 301
Query: 744 SLCMTEHPILNASIDPTQENILVNPDH-NISIAIDTKHGLVVPNIKSVNKLCLLDITREL 802
+L + P +N +I+ Q +V D+ +IS+A+ T GLV P +++ L +LDI E+
Sbjct: 302 TLAAKDIPAVNGAIEGDQ---IVYRDYTDISVAVATPKGLVTPVVRNAESLSVLDIENEI 358
Query: 803 LRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPRFDA 862
+R+ + +GK+ D+ GGT ++SN G G PII Q ++ ++ P
Sbjct: 359 VRLSHKARDGKLTLEDMTGGTFTISNGGVFGSLYGTPIINSPQTAVLGLHGVKERP-VTV 417
Query: 863 EMRIVAKCILNVTWAADHRVVDGATVARAATLWKSLENILVNP 905
+IV++ ++ + DHR++DG A T K+++ ++ +P
Sbjct: 418 NGQIVSRPMMYLALTYDHRLLDG---REAVTFLKTVKELIEDP 457
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 73/136 (53%), Gaps = 1/136 (0%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
+IS+A+ T GLV P +++ LS+LDI E++R+ + +GK+ D+ GGT ++SN G
Sbjct: 327 DISVAVATPKGLVTPVVRNAESLSVLDIENEIVRLSHKARDGKLTLEDMTGGTFTISNGG 386
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHRVVDGATVAR 1027
G PII Q ++ ++ P ++V++ ++ + DHR++DG
Sbjct: 387 VFGSLYGTPIINSPQTAVLGLHGVKERP-VTVNGQIVSRPMMYLALTYDHRLLDGREAVT 445
Query: 1028 AATLWKSLVENPALLL 1043
K L+E+P +L
Sbjct: 446 FLKTVKELIEDPRKML 461
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 33/151 (21%)
Query: 184 RHKLIQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTV 243
R K ++ + E + E ++KE+ NV G I E +++ +E+DK + + S GTV
Sbjct: 70 RFKSTSIEVPPMAESLTEGSLKEYTKNV--GDFIKEDELLATIETDKIDIEVNSPVSGTV 127
Query: 244 RKVYYGEGDVALVGKPLLDIEVED--------------------EGVAAEEADSLD---- 279
K+ + D VG+ L +E + +GVAA E S +
Sbjct: 128 TKLNFKPEDTVTVGEELAQVEPGEAPAEGSGESKPEPTEQAEPSQGVAARENSSEETASK 187
Query: 280 ------RKAAPGVSEVNTPDTSDQPNETLHK 304
++AAP EV P +DQP +T+ K
Sbjct: 188 KEAAPKKEAAPK-KEVTEPKKADQPKKTVSK 217
>sp|Q9N0F1|ODO2_PIG Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex, mitochondrial
OS=Sus scrofa GN=DLST PE=1 SV=1
Length = 455
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 4/208 (1%)
Query: 698 NTIPSLRLTEEVDTTQLRDVKNQVSALYQEKFRLKLTYMPFFIKALSLCMTEHPILNASI 757
NT L E+D + ++D++ + + +K LKL +M F+KA + + E P++NA I
Sbjct: 245 NTCAMLTTFNEIDMSNIQDMRARHKEAFLKKHNLKLGFMSAFVKASAFALQEQPVVNAVI 304
Query: 758 DPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLDITRELLRIQGCSHEGKVLPR 817
D T + ++ +IS+A+ T GLVVP I++V + DI R + + + + ++
Sbjct: 305 DDTTKEVVYRDYIDISVAVATPRGLVVPVIRNVETMNYADIERTISELGEKARKNELAIE 364
Query: 818 DIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLLPRFDAEMRIVAKCILNVTWA 877
D+ GGT ++SN G G PII P Q I+ I P ++ + ++ V
Sbjct: 365 DMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHAIVDRP-VAVGGKVEIRPMMYVALT 423
Query: 878 ADHRVVDGATVARAATLWKSLENILVNP 905
DHR++DG A T + ++ + +P
Sbjct: 424 YDHRLIDG---REAVTFLRKIKAAVEDP 448
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
Query: 908 NISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVG 967
+IS+A+ T GLVVP I++V ++ DI R + + + + ++ D+ GGT ++SN G
Sbjct: 318 DISVAVATPRGLVVPVIRNVETMNYADIERTISELGEKARKNELAIEDMDGGTFTISNGG 377
Query: 968 NVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHRVVDGATVAR 1027
G PII P Q I+ I P +V + ++ V DHR++DG
Sbjct: 378 VFGSLFGTPIINPPQSAILGMHAIVDRP-VAVGGKVEIRPMMYVALTYDHRLIDGREAVT 436
Query: 1028 AATLWKSLVENPALLL 1043
K+ VE+P +LL
Sbjct: 437 FLRKIKAAVEDPRVLL 452
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 172 LQCHHHLHTSCIRHKLIQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKA 231
L T+ + +I K E + E +++ W V G + E +VVCE+E+DK
Sbjct: 56 LNVRFFRTTAVCKDDVITVKTPAFAESVTEGDVR-WEKAV--GDTVAEDEVVCEIETDKT 112
Query: 232 SVTITSRYKGTVRKVYYGEGDVALVGKPLLDI 263
SV + S G + + +G G PL +
Sbjct: 113 SVQVPSPANGVIEALLVPDGGKVEGGTPLFTL 144
Score = 37.0 bits (84), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 432 LQCHHHLHTSCIRHKLIQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKA 491
L T+ + +I E + E +++ W V G + E +VVCE+E+DK
Sbjct: 56 LNVRFFRTTAVCKDDVITVKTPAFAESVTEGDVR-WEKAV--GDTVAEDEVVCEIETDKT 112
Query: 492 SVTITSRYKGTVRKVYYGEGDVALVGKPLLDI 523
SV + S G + + +G G PL +
Sbjct: 113 SVQVPSPANGVIEALLVPDGGKVEGGTPLFTL 144
>sp|Q92J43|ODO2_RICCN Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=sucB PE=3
SV=1
Length = 395
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 204/476 (42%), Gaps = 97/476 (20%)
Query: 443 IRHKLIQFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGT 502
+R K+I + +GE I E I +W +G + +++ E+E++K ++ + + GT
Sbjct: 1 MRVKII---VPSLGESITEATIAKWYKK--QGDSVKTDELLLEIETEKVTLEVNAPCNGT 55
Query: 503 VRKVYYGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQP---N 559
+ K+ EG VG+ + +I +EG +A A + + A ++ T TS++P N
Sbjct: 56 IGKISKTEGANVAVGEEIGEI---NEGASANTAGTNNESAK---AQAVTQPTSEKPAVAN 109
Query: 560 ETLHKD------PNKIDTKELRGTGKQGRVLKEDIITYMNSPSDETNPAHTAHVREASNV 613
TL NK+D ++GTG+ GR+ K D++ +N+ + + PA + E
Sbjct: 110 NTLAPSVQKLVTENKLDPNNIKGTGRDGRITKGDVLATINTTTT-SAPAISKSNEERVQR 168
Query: 614 ISIRGYVKGMFKSMTEA-NTIPSLRLTEEVDTTQLRDVKKEDIITYMNSPSDETNPAHTA 672
+ + K + + + ++ NT L E+D ++ +I N +E H
Sbjct: 169 VRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSK--------VIALRNQYKEEFEKKHA- 219
Query: 673 HVREASNVIPIRGYVKGMFKSMTEANTIPSLRLTEEVDTTQLRDVKNQVSALYQEKFRLK 732
VK F S TI +L+L
Sbjct: 220 --------------VKLGFMSFFVKATIEALKLI-------------------------- 239
Query: 733 LTYMPFFIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNK 792
P +NA ID ++++ ++I +A+ T+ GLVVP ++ +K
Sbjct: 240 ------------------PSVNAEID--GDDLVYKNYYDIGVAVGTEQGLVVPVVRDADK 279
Query: 793 LCLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFG 852
+ ++ + + + + EGK+ D+ GGT S+SN G G L PII P Q I+
Sbjct: 280 MGFAEVEKTIGILAKQAREGKLSMADLSGGTFSISNGGVYGSLLSTPIINPPQSGILGLH 339
Query: 853 KIQLLP-RFDAEMRIVAKCILNVTWAADHRVVDGATVARAATLWKSLENILVNPDH 907
K + D ++ I + ++ + + DHR++DG + ++ ++ NP+
Sbjct: 340 KTEERAVVIDGKIEI--RPMMYIALSYDHRIIDG---KEGVSFLVKIKQLIENPEK 390
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 23/148 (15%)
Query: 907 HNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNV 966
++I +A+ T+ GLVVP ++ +K+ ++ + + + + EGK+ D+ GGT S+SN
Sbjct: 257 YDIGVAVGTEQGLVVPVVRDADKMGFAEVEKTIGILAKQAREGKLSMADLSGGTFSISNG 316
Query: 967 GNVGGTLVQPIIVPRQVCIVAF-----------GKIQLLPRFDAEMRVVAKCILNVTWAA 1015
G G L PII P Q I+ GKI++ P ++ + +
Sbjct: 317 GVYGSLLSTPIINPPQSGILGLHKTEERAVVIDGKIEIRP------------MMYIALSY 364
Query: 1016 DHRVVDGATVARAATLWKSLVENPALLL 1043
DHR++DG K L+ENP LL
Sbjct: 365 DHRIIDGKEGVSFLVKIKQLIENPEKLL 392
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 91/204 (44%), Gaps = 54/204 (26%)
Query: 183 IRHKLIQFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGT 242
+R K+I + +GE I E I +W +G + +++ E+E++K ++ + + GT
Sbjct: 1 MRVKII---VPSLGESITEATIAKWYKK--QGDSVKTDELLLEIETEKVTLEVNAPCNGT 55
Query: 243 VRKVYYGEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETL 302
+ K+ EG VG+ + +I +EG +A NT T+++ +
Sbjct: 56 IGKISKTEGANVAVGEEIGEI---NEGASA-----------------NTAGTNNESAKA- 94
Query: 303 HKEPNKVNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEID 362
+ +P + KP V + LA PSV++++ ++D
Sbjct: 95 -----QAVTQPTSEKPAVANN----------------------TLA-PSVQKLVTENKLD 126
Query: 363 TKELRGTGKQGRVLKEDIITYMNS 386
++GTG+ GR+ K D++ +N+
Sbjct: 127 PNNIKGTGRDGRITKGDVLATINT 150
>sp|Q8NWR7|ODO2_STAAW Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain MW2) GN=odhB PE=3 SV=1
Length = 422
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/469 (23%), Positives = 201/469 (42%), Gaps = 66/469 (14%)
Query: 449 QFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYY 508
+ + ++ E I E I EW NV G + + + + E+E+DK +V + S G + +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNV--GDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLA 60
Query: 509 GEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKDPNK 568
EGD VG+ + I E G A++E N+ D + Q NE +
Sbjct: 61 SEGDTVEVGQAIAII-GEGSGNASKE---------------NSNDNTPQQNEETNN---- 100
Query: 569 IDTKELRGTGKQGRVLKEDIITYMNSPSDETNPAHTAHVREASNVISIRGYVKGMFKSMT 628
K++ T + E N A+ + + + S R Y + ++
Sbjct: 101 ----------------KKEETTNNSVDKAEVNQANDDNQQRINATPSARRYARENGVNLA 144
Query: 629 EANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSP-SDETNPAHTAHVREASNVIPIRGYV 687
E + P T +V V+KEDI +P S +T +A + N P + +
Sbjct: 145 EVS--PK---TNDV-------VRKEDIDKKQQAPASTQTTQQASAKEEKKYNQYPTKPVI 192
Query: 688 --------KGMFKSMTE-ANTIPSLRLTEEVDTTQLRDV-KNQVSALYQEKFRLKLTYMP 737
K K + E +N L EVD T + ++ K + ++ KL +M
Sbjct: 193 REKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDMTNVMELRKRKKEQFMKDHDGTKLGFMS 252
Query: 738 FFIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLD 797
FF KA + ++P +NA ID ++++ ++I +A+ T GL+VP ++ +K +
Sbjct: 253 FFTKASVAALKKYPEVNAEIDG--DDMITKQYYDIGVAVSTDDGLLVPFVRDCDKKNFAE 310
Query: 798 ITRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLL 857
I E+ + + E K+ D+ G+ +++N G G + PII Q I+ I
Sbjct: 311 IEAEIANLAVKAREKKLGLDDMVNGSFTITNGGIFGSMMSTPIINGNQAAILGMHSIITR 370
Query: 858 PRFDAEMRIVAKCILNVTWAADHRVVDGATVARAATLWKSLENILVNPD 906
P + I + ++ + + DHR++DG A K+++ ++ NP+
Sbjct: 371 PIAIDQDTIENRPMMYIALSYDHRIIDG---KEAVGFLKTIKELIENPE 416
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%)
Query: 907 HNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNV 966
++I +A+ T GL+VP ++ +K + +I E+ + + E K+ D+ G+ +++N
Sbjct: 283 YDIGVAVSTDDGLLVPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNG 342
Query: 967 GNVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHRVVDGATVA 1026
G G + PII Q I+ I P + + + ++ + + DHR++DG
Sbjct: 343 GIFGSMMSTPIINGNQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAV 402
Query: 1027 RAATLWKSLVENPALLL 1043
K L+ENP LL
Sbjct: 403 GFLKTIKELIENPEDLL 419
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 36/213 (16%)
Query: 189 QFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYY 248
+ K+ ++ E I E I EW NV G + + + + E+E+DK +V + S G + +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNV--GDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLA 60
Query: 249 GEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPNK 308
EGD VG+ + I E G A++E N+ D + Q NE +
Sbjct: 61 SEGDTVEVGQAIAII-GEGSGNASKE---------------NSNDNTPQQNEETN----- 99
Query: 309 VNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELRG 368
+K + T + S D A +NQ + N+ +I ATPS RR + ++ E+
Sbjct: 100 -------NKKEETTNNSVDKA--EVNQAN--DDNQQRINATPSARRYARENGVNLAEV-S 147
Query: 369 TGKQGRVLKEDIITYMNSPIDETNLAHTAHVRE 401
V KEDI +P T A +E
Sbjct: 148 PKTNDVVRKEDIDKKQQAPAS-TQTTQQASAKE 179
>sp|Q6G9E9|ODO2_STAAS Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain MSSA476) GN=odhB PE=3 SV=1
Length = 422
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/469 (23%), Positives = 201/469 (42%), Gaps = 66/469 (14%)
Query: 449 QFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYY 508
+ + ++ E I E I EW NV G + + + + E+E+DK +V + S G + +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNV--GDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLA 60
Query: 509 GEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKDPNK 568
EGD VG+ + I E G A++E N+ D + Q NE +
Sbjct: 61 SEGDTVEVGQAIAII-GEGSGNASKE---------------NSNDNTPQQNEETNN---- 100
Query: 569 IDTKELRGTGKQGRVLKEDIITYMNSPSDETNPAHTAHVREASNVISIRGYVKGMFKSMT 628
K++ T + E N A+ + + + S R Y + ++
Sbjct: 101 ----------------KKEETTNNSVDKAEVNQANDDNQQRINATPSARRYARENGVNLA 144
Query: 629 EANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSP-SDETNPAHTAHVREASNVIPIRGYV 687
E + P T +V V+KEDI +P S +T +A + N P + +
Sbjct: 145 EVS--PK---TNDV-------VRKEDIDKKQQAPASTQTTQQASAKEEKKYNQYPTKPVI 192
Query: 688 --------KGMFKSMTE-ANTIPSLRLTEEVDTTQLRDV-KNQVSALYQEKFRLKLTYMP 737
K K + E +N L EVD T + ++ K + ++ KL +M
Sbjct: 193 REKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDMTNVMELRKRKKEQFMKDHDGTKLGFMS 252
Query: 738 FFIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLD 797
FF KA + ++P +NA ID ++++ ++I +A+ T GL+VP ++ +K +
Sbjct: 253 FFTKASVAALKKYPEVNAEIDG--DDMITKQYYDIGVAVSTDDGLLVPFVRDCDKKNFAE 310
Query: 798 ITRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLL 857
I E+ + + E K+ D+ G+ +++N G G + PII Q I+ I
Sbjct: 311 IEAEIANLAVKAREKKLGLDDMVNGSFTITNGGIFGSMMSTPIINGNQAAILGMHSIITR 370
Query: 858 PRFDAEMRIVAKCILNVTWAADHRVVDGATVARAATLWKSLENILVNPD 906
P + I + ++ + + DHR++DG A K+++ ++ NP+
Sbjct: 371 PIAIDQDTIENRPMMYIALSYDHRIIDG---KEAVGFLKTIKELIENPE 416
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%)
Query: 907 HNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNV 966
++I +A+ T GL+VP ++ +K + +I E+ + + E K+ D+ G+ +++N
Sbjct: 283 YDIGVAVSTDDGLLVPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNG 342
Query: 967 GNVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHRVVDGATVA 1026
G G + PII Q I+ I P + + + ++ + + DHR++DG
Sbjct: 343 GIFGSMMSTPIINGNQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAV 402
Query: 1027 RAATLWKSLVENPALLL 1043
K L+ENP LL
Sbjct: 403 GFLKTIKELIENPEDLL 419
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 36/213 (16%)
Query: 189 QFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYY 248
+ K+ ++ E I E I EW NV G + + + + E+E+DK +V + S G + +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNV--GDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLA 60
Query: 249 GEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPNK 308
EGD VG+ + I E G A++E N+ D + Q NE +
Sbjct: 61 SEGDTVEVGQAIAII-GEGSGNASKE---------------NSNDNTPQQNEETN----- 99
Query: 309 VNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELRG 368
+K + T + S D A +NQ + N+ +I ATPS RR + ++ E+
Sbjct: 100 -------NKKEETTNNSVDKA--EVNQAN--DDNQQRINATPSARRYARENGVNLAEV-S 147
Query: 369 TGKQGRVLKEDIITYMNSPIDETNLAHTAHVRE 401
V KEDI +P T A +E
Sbjct: 148 PKTNDVVRKEDIDKKQQAPAS-TQTTQQASAKE 179
>sp|Q5HG07|ODO2_STAAC Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain COL) GN=odhB PE=3 SV=1
Length = 422
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/469 (23%), Positives = 201/469 (42%), Gaps = 66/469 (14%)
Query: 449 QFNLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYY 508
+ + ++ E I E I EW NV G + + + + E+E+DK +V + S G + +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNV--GDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLA 60
Query: 509 GEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKDPNK 568
EGD VG+ + I E G A++E N+ D + Q NE +
Sbjct: 61 SEGDTVEVGQAIAII-GEGSGNASKE---------------NSNDNTPQQNEETNN---- 100
Query: 569 IDTKELRGTGKQGRVLKEDIITYMNSPSDETNPAHTAHVREASNVISIRGYVKGMFKSMT 628
K++ T + E N A+ + + + S R Y + ++
Sbjct: 101 ----------------KKEETTNNSVDKAEVNQANDDNQQRINATPSARRYARENGVNLA 144
Query: 629 EANTIPSLRLTEEVDTTQLRDVKKEDIITYMNSP-SDETNPAHTAHVREASNVIPIRGYV 687
E + P T +V V+KEDI +P S +T +A + N P + +
Sbjct: 145 EVS--PK---TNDV-------VRKEDIDKKQQAPASTQTTQQASAKEEKKYNQYPTKPVI 192
Query: 688 --------KGMFKSMTE-ANTIPSLRLTEEVDTTQLRDV-KNQVSALYQEKFRLKLTYMP 737
K K + E +N L EVD T + ++ K + ++ KL +M
Sbjct: 193 REKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDMTNVMELRKRKKEQFMKDHDGTKLGFMS 252
Query: 738 FFIKALSLCMTEHPILNASIDPTQENILVNPDHNISIAIDTKHGLVVPNIKSVNKLCLLD 797
FF KA + ++P +NA ID ++++ ++I +A+ T GL+VP ++ +K +
Sbjct: 253 FFTKASVAALKKYPEVNAEIDG--DDMITKQYYDIGVAVSTDDGLLVPFVRDCDKKNFAE 310
Query: 798 ITRELLRIQGCSHEGKVLPRDIQGGTISMSNVGNVGGTLVQPIIVPGQVCIVAFGKIQLL 857
I E+ + + E K+ D+ G+ +++N G G + PII Q I+ I
Sbjct: 311 IEAEIANLAVKAREKKLGLDDMVNGSFTITNGGIFGSMMSTPIINGNQAAILGMHSIITR 370
Query: 858 PRFDAEMRIVAKCILNVTWAADHRVVDGATVARAATLWKSLENILVNPD 906
P + I + ++ + + DHR++DG A K+++ ++ NP+
Sbjct: 371 PIAIDQDTIENRPMMYIALSYDHRIIDG---KEAVGFLKTIKELIENPE 416
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%)
Query: 907 HNISIAIDTKHGLVVPNIKSVNKLSLLDITRELLRIQGCSHEGKVLPRDIQGGTISMSNV 966
++I +A+ T GL+VP ++ +K + +I E+ + + E K+ D+ G+ +++N
Sbjct: 283 YDIGVAVSTDDGLLVPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNG 342
Query: 967 GNVGGTLVQPIIVPRQVCIVAFGKIQLLPRFDAEMRVVAKCILNVTWAADHRVVDGATVA 1026
G G + PII Q I+ I P + + + ++ + + DHR++DG
Sbjct: 343 GIFGSMMSTPIINGNQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAV 402
Query: 1027 RAATLWKSLVENPALLL 1043
K L+ENP LL
Sbjct: 403 GFLKTIKELIENPEDLL 419
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 36/213 (16%)
Query: 189 QFKLADIGEGIREVNIKEWNGNVTEGARINEFDVVCEVESDKASVTITSRYKGTVRKVYY 248
+ K+ ++ E I E I EW NV G + + + + E+E+DK +V + S G + +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNV--GDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLA 60
Query: 249 GEGDVALVGKPLLDIEVEDEGVAAEEADSLDRKAAPGVSEVNTPDTSDQPNETLHKEPNK 308
EGD VG+ + I E G A++E N+ D + Q NE +
Sbjct: 61 SEGDTVEVGQAIAII-GEGSGNASKE---------------NSNDNTPQQNEETN----- 99
Query: 309 VNREPIAHKPDVTPDLSRDSAVSHLNQPVNLNKNKWKILATPSVRRMIKHYEIDTKELRG 368
+K + T + S D A +NQ + N+ +I ATPS RR + ++ E+
Sbjct: 100 -------NKKEETTNNSVDKA--EVNQAN--DDNQQRINATPSARRYARENGVNLAEV-S 147
Query: 369 TGKQGRVLKEDIITYMNSPIDETNLAHTAHVRE 401
V KEDI +P T A +E
Sbjct: 148 PKTNDVVRKEDIDKKQQAPAS-TQTTQQASAKE 179
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 389,234,569
Number of Sequences: 539616
Number of extensions: 16906367
Number of successful extensions: 46023
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 45059
Number of HSP's gapped (non-prelim): 607
length of query: 1045
length of database: 191,569,459
effective HSP length: 128
effective length of query: 917
effective length of database: 122,498,611
effective search space: 112331226287
effective search space used: 112331226287
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)