RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy64
(115 letters)
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 40.7 bits (96), Expect = 6e-07
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 58 RDFQCKVCDRAFFDVYNLKLHMRIHTGEK 86
R F C+VC RAF +LK H R HT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 29.5 bits (67), Expect = 0.009
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 16 RPFVCNMCPSTFKLKKHLRQHYKVH 40
R FVC +C F ++HL++HY+ H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSH 25
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 39.9 bits (94), Expect = 1e-06
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 53 VHEKIRDFQCKVCDRAFFDVYNLKLHMRIHTGE 85
+H + + C C +AF L H R+HTGE
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 35.7 bits (83), Expect = 5e-05
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 11 VHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 40
+H+ ++P+ C C F L QH +VH
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 38.1 bits (89), Expect = 5e-06
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 60 FQCKVCDRAFFDVYNLKLHMRIHTGEK 86
F C C + F +L H++ H +K
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 26.9 bits (60), Expect = 0.079
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 16 RPFVCNMCPSTFKLKKHLRQHYKVH 40
+ F C CP F HL +H K H
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTH 25
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 38.1 bits (89), Expect = 7e-06
Identities = 8/30 (26%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 60 FQCKVCDRAFFDVYNLKLHMR-IHTGEKKY 88
+ C+ C + F +L H++ +HT E+ +
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPH 35
Score = 30.7 bits (70), Expect = 0.004
Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 13/52 (25%)
Query: 13 TTDRPFVCNMCPSTFKLKKHLRQHYKVHLKMDTLENHMKAVHEKIRDFQCKV 64
+ +P++C C F HL H+K VH R +C+V
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNG-------------HIKQVHTSERPHKCQV 39
Score = 22.6 bits (49), Expect = 4.6
Identities = 8/22 (36%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Query: 2 KRQLKEHM-AVHTTDRPFVCNM 22
L H+ VHT++RP C +
Sbjct: 18 PDHLNGHIKQVHTSERPHKCQV 39
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 38.0 bits (88), Expect = 9e-06
Identities = 8/42 (19%), Positives = 23/42 (54%)
Query: 45 TLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMRIHTGEK 86
+++ ++K + +K + C + F YN++ H++ H ++
Sbjct: 6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 37.8 bits (88), Expect = 9e-06
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 8 HMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKM 43
T +PF C C +F HL H K H+ +
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37
Score = 28.5 bits (64), Expect = 0.029
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 53 VHEKIRDFQCKVCDRAFFDVYNLKLHMRIHTG 84
I+ FQC CDR+F +L LH + H
Sbjct: 5 GSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 24.3 bits (53), Expect = 1.1
Identities = 4/11 (36%), Positives = 5/11 (45%)
Query: 78 HMRIHTGEKKY 88
R TG K +
Sbjct: 2 STRGSTGIKPF 12
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 37.0 bits (86), Expect = 2e-05
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 60 FQCK--VCDRAFFDVYNLKLHMRIHTGEKKY 88
F C C ++F +LK HM++H+ + Y
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDY 32
Score = 24.7 bits (54), Expect = 0.77
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 2 KRQLKEHMAVHTTDRPFVC 20
K+ LKEHM +H+ R ++C
Sbjct: 16 KKHLKEHMKLHSDTRDYIC 34
Score = 23.1 bits (50), Expect = 2.4
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 18 FVCN--MCPSTFKLKKHLRQHYKVH 40
F C C +F KKHL++H K+H
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLH 26
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 36.4 bits (85), Expect = 2e-05
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 60 FQCKVCDRAFFDVYNLKLHMRIHTG 84
FQC++C R F +L H+R HTG
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 29.1 bits (66), Expect = 0.013
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 16 RPFVCNMCPSTFKLKKHLRQHYKVH 40
+PF C +C F HL H + H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTH 26
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId:
9606]}
Length = 38
Score = 36.3 bits (84), Expect = 3e-05
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 8 HMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 40
R + C+ C +F L +H + H
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35
Score = 35.5 bits (82), Expect = 6e-05
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 49 HMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMRIHTGE 85
+ R ++C C ++F +L H R HTGE
Sbjct: 3 SEW-QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 24.4 bits (53), Expect = 0.91
Identities = 1/11 (9%), Positives = 3/11 (27%)
Query: 78 HMRIHTGEKKY 88
++Y
Sbjct: 3 SEWQQRERRRY 13
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 35.4 bits (82), Expect = 6e-05
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 53 VHEKIRDFQCKVCDRAFFDVYNLKLHMRIHTGEK 86
H + + C CD+ F L +H + +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 34.3 bits (79), Expect = 2e-04
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 11 VHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 40
HT ++P+ C+ C TF+ K+ L H+K +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRY 31
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 35.0 bits (81), Expect = 8e-05
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 58 RDFQCKV--CDRAFFDVYNLKLHMRIHTGEK 86
R F C C + F L+ H R HTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 25.4 bits (56), Expect = 0.35
Identities = 9/27 (33%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 16 RPFVCNM--CPSTFKLKKHLRQHYKVH 40
RPF+C C F L++H + H
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTH 27
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 30
Score = 34.2 bits (79), Expect = 2e-04
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 58 RDFQCKV--CDRAFFDVYNLKLHMRIHTGE 85
+ +C C +++ + NLK H+R HTGE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 26.1 bits (58), Expect = 0.16
Identities = 6/27 (22%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 16 RPFVCN--MCPSTFKLKKHLRQHYKVH 40
+P C C ++ ++L+ H + H
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSH 27
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 35
Score = 34.0 bits (78), Expect = 2e-04
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 58 RDFQCKVCDRAFFDVYNLKLHMRIHTGE 85
R F C++C AF N H+++HT
Sbjct: 6 RPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 31.6 bits (72), Expect = 0.001
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 12 HTTDRPFVCNMCPSTFKLKKHLRQHYKVH 40
+ RPFVC +C S F K + +H KVH
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 33.5 bits (76), Expect = 5e-04
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 15/68 (22%)
Query: 15 DRPFVCNMCPSTFKLKKHLRQHYKVHLKMDTLENHMKAVHEKIRDFQCKVCDRAFFDVYN 74
D+ + C C +F K +H +HL + R + C VC + F ++
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGL--------------RPYGCGVCGKKFKMKHH 45
Query: 75 LKLHMRIH 82
L HM+IH
Sbjct: 46 LVGHMKIH 53
Score = 32.0 bits (72), Expect = 0.002
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 2 KRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 40
K Q HM++H RP+ C +C FK+K HL H K+H
Sbjct: 15 KSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 31.2 bits (71), Expect = 0.002
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 58 RDFQCKV--CDRAFFDVYNLKLHMRIHTGE 85
+ FQC C + F +NL+ H+RIHTG+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 25.4 bits (56), Expect = 0.36
Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 16 RPFVCN--MCPSTFKLKKHLRQHYKVH 40
+PF C C F L +LR H ++H
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIH 27
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 31.2 bits (70), Expect = 0.002
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 58 RDFQCKVCDRAFFDVYNLKLHMRIHTGEKKY 88
+ C++C + F DVY+L H H+GEK Y
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 31.1 bits (71), Expect = 0.003
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 58 RDFQCKV--CDRAFFDVYNLKLHMRIHTG 84
R + C V CDR F +L H+RIHTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 26.9 bits (60), Expect = 0.096
Identities = 8/27 (29%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Query: 16 RPFVCN--MCPSTFKLKKHLRQHYKVH 40
RP+ C C F L +H ++H
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIH 27
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 31.1 bits (71), Expect = 0.003
Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 53 VHEKIRDFQCKVCDRAFFDVYNLKLH-MRIHTGE 85
H + ++C +C F +K+H ++ HT
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 30.7 bits (70), Expect = 0.004
Identities = 6/30 (20%), Positives = 14/30 (46%)
Query: 11 VHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 40
H+ ++P+ C +C + F ++ H
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 21.5 bits (46), Expect = 9.3
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 80 RIHTGEKKY 88
R H+GEK Y
Sbjct: 1 RTHSGEKPY 9
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 30.8 bits (70), Expect = 0.004
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 58 RDFQCKV--CDRAFFDVYNLKLHMRIHTGE 85
R + C CD+AF ++L H + H +
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 27.3 bits (61), Expect = 0.073
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 15 DRPFVCN--MCPSTFKLKKHLRQHYKVHLK 42
DRP+ C+ C F L +H K H +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 30.3 bits (69), Expect = 0.006
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 60 FQCKVCDRAFFDVYNLKLHMRIHT 83
++C C +AF L H RIHT
Sbjct: 3 YKCLECGKAFSQNSGLINHQRIHT 26
Score = 28.3 bits (64), Expect = 0.030
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 16 RPFVCNMCPSTFKLKKHLRQHYKVH 40
+P+ C C F L H ++H
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIH 25
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 30.0 bits (67), Expect = 0.008
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 61 QCKVCDRAFFDVYNLKLHMRIHTGEK 86
+C C + F Y LK+H R HTGEK
Sbjct: 2 ECPTCHKKFLSKYYLKVHNRKHTGEK 27
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 29.2 bits (66), Expect = 0.012
Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Query: 58 RDFQCKV--CDRAFFDVYNLKLHMRIHT 83
R + C C++ F NLK H+ H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 25.0 bits (55), Expect = 0.47
Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Query: 16 RPFVCN--MCPSTFKLKKHLRQHYKVH 40
RP+VC C F +L+ H H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTH 27
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 28.5 bits (63), Expect = 0.026
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 58 RDFQCKVCDRAFFDVYNLKLHMRIHTGE 85
R F+C++C A + L +H+R HTG+
Sbjct: 2 RPFKCQICPYASRNSSQLTVHLRSHTGD 29
Score = 25.0 bits (54), Expect = 0.59
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 4/26 (15%)
Query: 15 DRPFVCNMCP----STFKLKKHLRQH 36
+RPF C +CP ++ +L HLR H
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSH 26
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 27.3 bits (60), Expect = 0.058
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 61 QCKVCDRAFFDVYNLKLHMRIHTG 84
+C+VC + F LK HMR HTG
Sbjct: 3 KCEVCGKCFSRKDKLKTHMRCHTG 26
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 26.9 bits (59), Expect = 0.096
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 58 RDFQCKVCDRAFFDVYNLKLHMRIHTGE 85
R C C +AF + LK H +HTGE
Sbjct: 1 RVHVCAECGKAFVESSKLKRHQLVHTGE 28
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 27.0 bits (60), Expect = 0.100
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 58 RDFQCKVCDRAFFDVYNLKLHMRIHTGEK 86
R + C C R F L HM +H ++
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVHRRDR 32
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 26.3 bits (58), Expect = 0.17
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 15 DRPFVCNMCPSTFKLKKHLRQHYKVHLK 42
++PF C++C F ++H K+HL+
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIHLR 28
Score = 24.8 bits (54), Expect = 0.57
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 58 RDFQCKVCDRAFFDVYNLKLHMRIH 82
+ F C +C R F K H +IH
Sbjct: 2 KPFACDICGRKFARSDERKRHTKIH 26
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 25.9 bits (56), Expect = 0.21
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 57 IRDFQCKVCDRAFFDVYNLKLHMRIHT 83
++ ++CK CD A D +L H+RIH+
Sbjct: 1 VKPYKCKTCDYAAADSSSLNKHLRIHS 27
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 25.9 bits (56), Expect = 0.23
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 60 FQCKVCDRAFFDVYNLKLHMRIHTGE 85
F C VC F L+LHM HTGE
Sbjct: 5 FTCSVCQETFRRRMELRLHMVSHTGE 30
Score = 24.3 bits (52), Expect = 0.97
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 14 TDRPFVCNMCPSTFKLKKHLRQHYKVH 40
+++ F C++C TF+ + LR H H
Sbjct: 1 SEQVFTCSVCQETFRRRMELRLHMVSH 27
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 25.5 bits (56), Expect = 0.30
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 62 CKVCDRAFFDVYNLKLHMRIHTGE 85
C R F Y L +HMR HTGE
Sbjct: 10 CSRELRPFKAQYMLVVHMRRHTGE 33
>d1vfsa2 c.1.6.1 (A:13-249) Alanine racemase {Streptomyces
lavendulae [TaxId: 1914]}
Length = 237
Score = 27.2 bits (59), Expect = 0.39
Identities = 8/91 (8%), Positives = 18/91 (19%), Gaps = 2/91 (2%)
Query: 7 EHMAVHTTDRPFVCNM--CPSTFKLKKHLRQHYKVHLKMDTLENHMKAVHEKIRDFQCKV 64
A+ T V M + + ++ LK DT +
Sbjct: 80 WREAIETDIDVSVSGMWALDEVRAAARAAGRTARIQLKADTGLGRNGCQPADWAELVGAA 139
Query: 65 CDRAFFDVYNLKLHMRIHTGEKKYIFIVVKK 95
+ + ++
Sbjct: 140 VAAQAEGTVQVTGVWSHFACADEPGHPSIRL 170
>g1o7d.3 c.6.2.1 (A:51-342,B:347-384) Lysosomal alpha-mannosidase
{Cow (Bos taurus) [TaxId: 9913]}
Length = 330
Score = 26.6 bits (58), Expect = 0.85
Identities = 4/29 (13%), Positives = 14/29 (48%)
Query: 28 KLKKHLRQHYKVHLKMDTLENHMKAVHEK 56
KL + + +V++ T ++ +++
Sbjct: 284 KLIQLVNAQIRVNVLYSTPACYLWELNKA 312
>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 24.5 bits (53), Expect = 0.98
Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Query: 15 DRPFVCNM--CPSTFKLKKHLRQHYKVH 40
D+PF+C C F + HL H H
Sbjct: 4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH 31
>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 30
Score = 23.9 bits (51), Expect = 1.3
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 58 RDFQCKV--CDRAFFDVYNLKLHMRIHTGE 85
+ F CK C++ F +++L H HTGE
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 24.2 bits (52), Expect = 1.5
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 60 FQCKVCDRAFFDVYNLKLHMRIH 82
C +C + F D L+ H H
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQH 29
>d1ug8a_ d.68.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 87
Score = 24.8 bits (54), Expect = 1.7
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 76 KLHMRIHTGEKKYIFIVVKKI 96
+H+ +KK IV+ K+
Sbjct: 56 GIHVETLETDKKERHIVISKV 76
>d1l8ca_ g.53.1.1 (A:) CREB-binding transcriptional adaptor
protein CBP (p300) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 95
Score = 24.9 bits (54), Expect = 1.8
Identities = 8/35 (22%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 1 MKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQ 35
MK L HM + C S+ ++ H +
Sbjct: 43 MKNVLN-HMTHCQAGKACQVAHCASSRQIISHWKN 76
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 23.2 bits (49), Expect = 2.0
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 60 FQCKVCDRAFFDVYNLKLHMRIH 82
++C +C+R+F + L H R+H
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 23.5 bits (51), Expect = 3.1
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 60 FQCKVCDRAFFDVYNLKLHMR 80
+C C R F D NLK H R
Sbjct: 16 HRCLACARYFIDSTNLKTHFR 36
>d1f81a_ g.53.1.1 (A:) CREB-binding transcriptional adaptor
protein CBP (p300) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 87
Score = 23.7 bits (51), Expect = 3.5
Identities = 9/39 (23%), Positives = 12/39 (30%), Gaps = 4/39 (10%)
Query: 1 MKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKV 39
MKR ++ H C +C L H K
Sbjct: 36 MKRVVQ-HTKGCKRKTNGGCPVCKQLIAL---CCYHAKH 70
>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster
[TaxId: 7227]}
Length = 54
Score = 23.2 bits (49), Expect = 3.8
Identities = 6/26 (23%), Positives = 17/26 (65%)
Query: 14 TDRPFVCNMCPSTFKLKKHLRQHYKV 39
+++P C +C + + ++LR+H ++
Sbjct: 21 SEQPATCPICYAVIRQSRNLRRHLEL 46
>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 75
Score = 23.5 bits (50), Expect = 4.0
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 60 FQCKVCDRAFFDVYNLKLHMRIHTGE 85
+QCK CD L H+ IH E
Sbjct: 19 YQCKHCDSKLQSTAELTSHLNIHNEE 44
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 22.3 bits (47), Expect = 4.9
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 15 DRPFVCNMCPSTFKLKKHLRQHYKVH 40
++P+ C +C FK K + H + H
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSH 26
>d1zu1a2 g.37.1.4 (A:74-128) dsRNA-binding protein ZFa (ZNF346,
JAZ) {African clawed frog (Xenopus laevis) [TaxId:
8355]}
Length = 55
Score = 22.9 bits (49), Expect = 5.3
Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Query: 15 DRPFVCNMCPSTFKLKKHLRQHY--KVHLK 42
DR C +C TF HY K H+K
Sbjct: 19 DRSKCCPVCNMTFSSPVVAESHYIGKTHIK 48
>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 21.9 bits (46), Expect = 7.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 17 PFVCNMCPSTFKLKKHLRQHYK 38
P+ C C +FK K +L +H K
Sbjct: 1 PYHCTYCNFSFKTKGNLTKHMK 22
>d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase
MYST1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 271
Score = 23.6 bits (51), Expect = 7.8
Identities = 6/26 (23%), Positives = 10/26 (38%)
Query: 14 TDRPFVCNMCPSTFKLKKHLRQHYKV 39
+ ++C C K +K R H
Sbjct: 28 QPKLWLCEYCLKYMKYEKSYRFHLGQ 53
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.332 0.141 0.436
Gapped
Lambda K H
0.267 0.0540 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 469,097
Number of extensions: 20970
Number of successful extensions: 223
Number of sequences better than 10.0: 1
Number of HSP's gapped: 217
Number of HSP's successfully gapped: 104
Length of query: 115
Length of database: 2,407,596
Length adjustment: 73
Effective length of query: 42
Effective length of database: 1,405,306
Effective search space: 59022852
Effective search space used: 59022852
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 47 (22.3 bits)