Your job contains 1 sequence.
>psy6404
MSTAEEAVLETAVEVLEAVPPGVLALVYRLQISTSLRSFTTPCFSFKCTLADGDCDMRFV
FCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNK
LDTLRPTQASLYLDLVKSFLFYSPQIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGAS
LSILNAATWIDEERLLLSVLDTQHMTGGLSKWSDTQADILHTYLGEFFVRPRIIKTQIES
LKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVLDTQHMTGG
LSKWSDTQADILHTYLEAMSHASRNKLKERNFQLPLDKKDIAPLDELERIDTNMAFVEVA
Q
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6404
(361 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-050913-85 - symbol:pggt1b "protein geranylg... 439 2.2e-41 1
UNIPROTKB|F1NE58 - symbol:PGGT1B "Uncharacterized protein... 433 9.6e-41 1
UNIPROTKB|E2QZU5 - symbol:PGGT1B "Uncharacterized protein... 427 4.2e-40 1
RGD|621754 - symbol:Pggt1b "protein geranylgeranyltransfe... 426 5.3e-40 1
UNIPROTKB|P53610 - symbol:Pggt1b "Geranylgeranyl transfer... 426 5.3e-40 1
MGI|MGI:1917514 - symbol:Pggt1b "protein geranylgeranyltr... 426 5.3e-40 1
UNIPROTKB|Q5EAD5 - symbol:PGGT1B "Geranylgeranyl transfer... 426 5.3e-40 1
UNIPROTKB|F1RLE8 - symbol:PGGT1B "Uncharacterized protein... 426 5.3e-40 1
UNIPROTKB|P53609 - symbol:PGGT1B "Geranylgeranyl transfer... 425 6.8e-40 1
FB|FBgn0015000 - symbol:betaggt-I "beta subunit of type I... 250 3.1e-38 2
UNIPROTKB|F1N4H5 - symbol:PGGT1B "Geranylgeranyl transfer... 393 1.7e-36 1
TAIR|locus:2039752 - symbol:PGGT-I species:3702 "Arabidop... 363 2.5e-33 1
DICTYBASE|DDB_G0269726 - symbol:pggt1b "protein geranylge... 229 5.2e-31 2
UNIPROTKB|O18197 - symbol:Y48E1B.3 "Protein Y48E1B.3, iso... 305 3.5e-27 1
WB|WBGene00013002 - symbol:Y48E1B.3 species:6239 "Caenorh... 305 5.0e-26 1
POMBASE|SPAC2E1P5.04c - symbol:cwg2 "geranylgeranyltransf... 260 2.1e-22 1
SGD|S000006380 - symbol:BET2 "Beta subunit of Type II ger... 233 1.1e-18 1
TAIR|locus:2177058 - symbol:RGTB1 "RAB geranylgeranyl tra... 192 6.9e-16 2
CGD|CAL0000126 - symbol:BET2 species:5476 "Candida albica... 213 1.7e-15 1
ASPGD|ASPL0000027483 - symbol:AN5760 species:162425 "Emer... 151 2.0e-15 2
DICTYBASE|DDB_G0290671 - symbol:rabggtb "protein geranylg... 207 9.4e-15 1
UNIPROTKB|D3DQ78 - symbol:RABGGTB "Geranylgeranyl transfe... 144 1.1e-14 2
ASPGD|ASPL0000011885 - symbol:AN3747 species:162425 "Emer... 206 1.1e-14 1
FB|FBgn0028970 - symbol:betaggt-II "beta subunit of type ... 204 2.5e-14 1
GENEDB_PFALCIPARUM|PFF0120w - symbol:PFF0120w "putative g... 172 3.5e-14 2
UNIPROTKB|G4MQQ5 - symbol:MGG_09304 "Type-2 protein geran... 197 3.6e-14 2
SGD|S000003123 - symbol:CDC43 "Beta subunit of geranylger... 200 1.1e-13 1
UNIPROTKB|F1P4E5 - symbol:RABGGTB "Uncharacterized protei... 185 4.7e-12 1
UNIPROTKB|F1LSM6 - symbol:Rabggtb "Geranylgeranyl transfe... 184 5.4e-12 1
UNIPROTKB|F1M052 - symbol:Rabggtb "Geranylgeranyl transfe... 184 5.7e-12 1
TAIR|locus:2088614 - symbol:RGTB2 "RAB geranylgeranyl tra... 182 7.8e-12 1
UNIPROTKB|P53611 - symbol:RABGGTB "Geranylgeranyl transfe... 180 1.6e-11 1
RGD|3530 - symbol:Rabggtb "Rab geranylgeranyltransferase,... 180 1.6e-11 1
MGI|MGI:99537 - symbol:Rabggtb "RAB geranylgeranyl transf... 180 1.8e-11 1
UNIPROTKB|G8JKY6 - symbol:RABGGTB "Geranylgeranyl transfe... 178 2.8e-11 1
UNIPROTKB|Q5E9B3 - symbol:RABGGTB "Geranylgeranyl transfe... 178 2.8e-11 1
UNIPROTKB|F1P6X0 - symbol:RABGGTB "Uncharacterized protei... 178 2.8e-11 1
ZFIN|ZDB-GENE-040426-2116 - symbol:rabggtb "Rab geranylge... 176 4.8e-11 1
WB|WBGene00015099 - symbol:ggtb-1 species:6239 "Caenorhab... 168 4.3e-10 1
POMBASE|SPAC167.02 - symbol:ptb1 "geranylgeranyltransfera... 166 5.7e-10 1
CGD|CAL0001670 - symbol:RAM1 species:5476 "Candida albica... 148 5.3e-09 2
UNIPROTKB|Q59LD0 - symbol:RAM1 "Putative uncharacterized ... 148 5.3e-09 2
CGD|CAL0001576 - symbol:CDC43 species:5476 "Candida albic... 153 3.2e-08 1
UNIPROTKB|Q59KC5 - symbol:CDC43 "Putative uncharacterized... 153 3.2e-08 1
ZFIN|ZDB-GENE-030131-2220 - symbol:fntb "farnesyltransfer... 146 2.4e-07 1
DICTYBASE|DDB_G0270948 - symbol:fntB "protein farnesyltra... 146 3.3e-07 1
TAIR|locus:2173802 - symbol:ERA1 "ENHANCED RESPONSE TO AB... 145 4.0e-07 1
SGD|S000002248 - symbol:RAM1 "Beta subunit of the CAAX fa... 144 4.2e-07 1
WB|WBGene00006465 - symbol:fntb-1 species:6239 "Caenorhab... 136 2.9e-06 1
UNIPROTKB|Q19752 - symbol:fntb-1 "Protein FNTB-1" species... 136 2.9e-06 1
UNIPROTKB|B3KSC2 - symbol:CHURC1-FNTB "cDNA FLJ35979 fis,... 100 9.0e-06 2
FB|FBgn0038424 - symbol:CG17565 species:7227 "Drosophila ... 130 1.5e-05 1
ASPGD|ASPL0000050108 - symbol:AN2002 species:162425 "Emer... 127 4.0e-05 3
POMBASE|SPAC17G6.04c - symbol:cpp1 "protein farnesyltrans... 124 6.0e-05 1
GENEDB_PFALCIPARUM|PF11_0483 - symbol:PF11_0483 "farnesyl... 125 0.00016 1
UNIPROTKB|Q8IHP6 - symbol:PF11_0483 "Farnesyltransferase ... 125 0.00016 1
UNIPROTKB|B4E1A0 - symbol:CHURC1-FNTB "cDNA FLJ58825, hig... 119 0.00023 1
UNIPROTKB|P49356 - symbol:FNTB "Protein farnesyltransfera... 119 0.00027 1
UNIPROTKB|B4DL54 - symbol:CHURC1-FNTB "cDNA FLJ59570, hig... 119 0.00031 1
UNIPROTKB|H0YHI0 - symbol:CHURC1-FNTB "Protein CHURC1-FNT... 119 0.00031 1
MGI|MGI:1861305 - symbol:Fntb "farnesyltransferase, CAAX ... 117 0.00045 1
RGD|620119 - symbol:Fntb "farnesyltransferase, CAAX box, ... 117 0.00045 1
UNIPROTKB|Q02293 - symbol:Fntb "Protein farnesyltransfera... 117 0.00045 1
UNIPROTKB|P49355 - symbol:FNTB "Protein farnesyltransfera... 116 0.00059 1
UNIPROTKB|F1SA56 - symbol:CHURC1-FNTB "Uncharacterized pr... 114 0.00063 1
>ZFIN|ZDB-GENE-050913-85 [details] [associations]
symbol:pggt1b "protein geranylgeranyltransferase
type I, beta subunit" species:7955 "Danio rerio" [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016740 "transferase activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 ZFIN:ZDB-GENE-050913-85
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0008152
eggNOG:COG5029 CTD:5229 HOGENOM:HOG000180333 HOVERGEN:HBG008181
KO:K11713 OrthoDB:EOG4KD6MC EMBL:BC097132 IPI:IPI00484889
RefSeq:NP_001025426.1 UniGene:Dr.78336 ProteinModelPortal:Q4V8Z9
SMR:Q4V8Z9 GeneID:570808 KEGG:dre:570808 NextBio:20890306
ArrayExpress:Q4V8Z9 Uniprot:Q4V8Z9
Length = 355
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 90/203 (44%), Positives = 123/203 (60%)
Query: 24 LALVYRLQISTSLRSFTTPCFSFKCTLADGDCDMRFVFCACSICYILDDWSGMDRARCLE 83
L V R + LR+ SF + DMRFV+CA IC++LDDWSGMDR + ++
Sbjct: 128 LGRVDRAACVSGLRALQLEDGSFYAVPEGSENDMRFVYCAACICFMLDDWSGMDRQKTID 187
Query: 84 FIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFYS 143
+I RS S+D GQG LESHGGST+CA+ASL +M KL + F
Sbjct: 188 YIRRSTSFDFGIGQGAGLESHGGSTFCAVASLCMMGKLREV----------------FSE 231
Query: 144 PQIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQ 203
++ L+RW + RQ++GFQGRPNKPVDTCY+FW+GA+L +L+ + + E+ +L TQ
Sbjct: 232 RELGRLRRWCVLRQQNGFQGRPNKPVDTCYSFWVGATLQLLDVFQYTNFEKNRNYILSTQ 291
Query: 204 -HMTGGLSKWSDTQADILHTYLG 225
+ GG +KW D+ D LHTY G
Sbjct: 292 DRLVGGFAKWPDSHPDPLHTYFG 314
Score = 226 (84.6 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 39/80 (48%), Positives = 57/80 (71%)
Query: 237 QIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVLDTQ- 295
++ L+RW + RQ++GFQGRPNKPVDTCY+FW+GA+L +L+ + + E+ +L TQ
Sbjct: 233 ELGRLRRWCVLRQQNGFQGRPNKPVDTCYSFWVGATLQLLDVFQYTNFEKNRNYILSTQD 292
Query: 296 HMTGGLSKWSDTQADILHTY 315
+ GG +KW D+ D LHTY
Sbjct: 293 RLVGGFAKWPDSHPDPLHTY 312
Score = 55 (24.4 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSY-DGAFGQGP-CLESHGGSTYC 110
G M + AC + + DD +DRA C+ + R+L DG+F P E+ YC
Sbjct: 109 GHVTMTYTGLAC-LLILGDDLGRVDRAACVSGL-RALQLEDGSFYAVPEGSENDMRFVYC 166
Query: 111 ALASLALM 118
A A + M
Sbjct: 167 A-ACICFM 173
>UNIPROTKB|F1NE58 [details] [associations]
symbol:PGGT1B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0008152 GeneTree:ENSGT00530000063392
OMA:FILSTQD EMBL:AADN02074198 EMBL:AADN02074199 EMBL:AADN02074200
EMBL:AADN02074201 IPI:IPI00575455 Ensembl:ENSGALT00000013349
Uniprot:F1NE58
Length = 332
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 86/203 (42%), Positives = 121/203 (59%)
Query: 24 LALVYRLQISTSLRSFTTPCFSFKCTLADGDCDMRFVFCACSICYILDDWSGMDRARCLE 83
L+ V + + LR+ SF L + DMRFV+CA ICY+LD+WSGMD + ++
Sbjct: 93 LSRVNKDALLAGLRALQLEDGSFCAVLEGSENDMRFVYCASCICYMLDNWSGMDMKKAID 152
Query: 84 FIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFYS 143
+I RS+SYD QG LESHGGST+C +ASL LM KL+ + F
Sbjct: 153 YIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEV----------------FSE 196
Query: 144 PQIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQ 203
++ + RW + RQ++G+ GRPNKPVDTCY+FW+GA+L +LN + + E+ +L TQ
Sbjct: 197 KELSRIGRWCVMRQQNGYHGRPNKPVDTCYSFWVGATLKLLNLFQYTNFEKNRNYILSTQ 256
Query: 204 -HMTGGLSKWSDTQADILHTYLG 225
+ GG +KW D+ D LH Y G
Sbjct: 257 DRLVGGFAKWPDSHPDALHAYFG 279
Score = 216 (81.1 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 36/80 (45%), Positives = 54/80 (67%)
Query: 237 QIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVLDTQ- 295
++ + RW + RQ++G+ GRPNKPVDTCY+FW+GA+L +LN + + E+ +L TQ
Sbjct: 198 ELSRIGRWCVMRQQNGYHGRPNKPVDTCYSFWVGATLKLLNLFQYTNFEKNRNYILSTQD 257
Query: 296 HMTGGLSKWSDTQADILHTY 315
+ GG +KW D+ D LH Y
Sbjct: 258 RLVGGFAKWPDSHPDALHAY 277
>UNIPROTKB|E2QZU5 [details] [associations]
symbol:PGGT1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0008152 GeneTree:ENSGT00530000063392 CTD:5229
KO:K11713 OMA:FILSTQD EMBL:AAEX03007707 RefSeq:XP_538560.2
ProteinModelPortal:E2QZU5 Ensembl:ENSCAFT00000000341 GeneID:481440
KEGG:cfa:481440 NextBio:20856233 Uniprot:E2QZU5
Length = 377
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 85/192 (44%), Positives = 119/192 (61%)
Query: 36 LRSFTTPCFSFKCTLADG-DCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGA 94
LR+ SF C + +G + DMRFV+CA ICY+L++WSGMD + + +I RS+SYD
Sbjct: 151 LRALQLEDGSF-CAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAINYIRRSMSYDNG 209
Query: 95 FGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFYSPQIESLKRWLI 154
QG LESHGGST+C +ASL LM+KL+ + F ++ +KRW I
Sbjct: 210 LAQGAGLESHGGSTFCGIASLCLMDKLEEV----------------FSEKELNRIKRWCI 253
Query: 155 FRQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQ-HMTGGLSKWS 213
RQ++G+ GRPNKPVDTCY+FW+GA+L +L + + E+ +L TQ + GG +KW
Sbjct: 254 MRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQDRLVGGFAKWP 313
Query: 214 DTQADILHTYLG 225
D+ D LH Y G
Sbjct: 314 DSHPDALHAYFG 325
Score = 218 (81.8 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 37/80 (46%), Positives = 54/80 (67%)
Query: 237 QIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVLDTQ- 295
++ +KRW I RQ++G+ GRPNKPVDTCY+FW+GA+L +L + + E+ +L TQ
Sbjct: 244 ELNRIKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQD 303
Query: 296 HMTGGLSKWSDTQADILHTY 315
+ GG +KW D+ D LH Y
Sbjct: 304 RLVGGFAKWPDSHPDALHAY 323
>RGD|621754 [details] [associations]
symbol:Pggt1b "protein geranylgeranyltransferase type I, beta
subunit" species:10116 "Rattus norvegicus" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=IDA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IDA;TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0018344 "protein geranylgeranylation"
evidence=TAS] [GO:0034097 "response to cytokine stimulus"
evidence=IMP] [GO:0045787 "positive regulation of cell cycle"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051771 "negative regulation of nitric-oxide synthase
biosynthetic process" evidence=IMP] [GO:0008144 "drug binding"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0019840 "isoprenoid binding" evidence=IDA] [GO:0042277 "peptide
binding" evidence=IDA] InterPro:IPR001330 Pfam:PF00432 RGD:621754
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008284
GO:GO:0034097 GO:GO:0045787 eggNOG:COG5029 GO:GO:0051771
GO:GO:0005953 GO:GO:0004662 GO:GO:0018344 PDB:1N4P PDB:1N4Q
PDB:1N4R PDB:1N4S PDB:1S64 PDB:1TNB PDB:1TNO PDB:1TNU PDB:1TNY
PDB:1TNZ PDBsum:1N4P PDBsum:1N4Q PDBsum:1N4R PDBsum:1N4S
PDBsum:1S64 PDBsum:1TNB PDBsum:1TNO PDBsum:1TNU PDBsum:1TNY
PDBsum:1TNZ GeneTree:ENSGT00530000063392 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 KO:K11713 OMA:FILSTQD
OrthoDB:EOG4KD6MC EMBL:L24116 IPI:IPI00211844 PIR:B53044
RefSeq:NP_112344.1 UniGene:Rn.10031 ProteinModelPortal:P53610
SMR:P53610 IntAct:P53610 Ensembl:ENSRNOT00000004723 GeneID:81746
KEGG:rno:81746 UCSC:RGD:621754 InParanoid:P53610 BindingDB:P53610
ChEMBL:CHEMBL3989 EvolutionaryTrace:P53610 NextBio:615482
Genevestigator:P53610 GermOnline:ENSRNOG00000003541 Uniprot:P53610
Length = 377
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 85/192 (44%), Positives = 118/192 (61%)
Query: 36 LRSFTTPCFSFKCTLADG-DCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGA 94
LR+ SF C + +G + DMRFV+CA ICY+L++WSGMD + + +I RS+SYD
Sbjct: 151 LRALQLEDGSF-CAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAISYIRRSMSYDNG 209
Query: 95 FGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFYSPQIESLKRWLI 154
QG LESHGGST+C +ASL LM KL+ + F ++ +KRW I
Sbjct: 210 LAQGAGLESHGGSTFCGIASLCLMGKLEEV----------------FSEKELNRIKRWCI 253
Query: 155 FRQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQ-HMTGGLSKWS 213
RQ++G+ GRPNKPVDTCY+FW+GA+L +L + + E+ +L TQ + GG +KW
Sbjct: 254 MRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQDRLVGGFAKWP 313
Query: 214 DTQADILHTYLG 225
D+ D LH Y G
Sbjct: 314 DSHPDALHAYFG 325
Score = 218 (81.8 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 37/80 (46%), Positives = 54/80 (67%)
Query: 237 QIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVLDTQ- 295
++ +KRW I RQ++G+ GRPNKPVDTCY+FW+GA+L +L + + E+ +L TQ
Sbjct: 244 ELNRIKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQD 303
Query: 296 HMTGGLSKWSDTQADILHTY 315
+ GG +KW D+ D LH Y
Sbjct: 304 RLVGGFAKWPDSHPDALHAY 323
Score = 55 (24.4 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 23/83 (27%), Positives = 37/83 (44%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSY-DGAFGQGP-CLESHGGSTYC 110
G M + +C I + DD S +D+ CL + R+L DG+F P E+ YC
Sbjct: 120 GHIAMTYTGLSCLII-LGDDLSRVDKEACLAGL-RALQLEDGSFCAVPEGSENDMRFVYC 177
Query: 111 ALASLALMNKLDTLRPTQASLYL 133
A ++N + +A Y+
Sbjct: 178 ASCICYMLNNWSGMDMKKAISYI 200
>UNIPROTKB|P53610 [details] [associations]
symbol:Pggt1b "Geranylgeranyl transferase type-1 subunit
beta" species:10116 "Rattus norvegicus" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001330 Pfam:PF00432 RGD:621754
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008284
GO:GO:0034097 GO:GO:0045787 eggNOG:COG5029 GO:GO:0051771
GO:GO:0005953 GO:GO:0004662 GO:GO:0018344 PDB:1N4P PDB:1N4Q
PDB:1N4R PDB:1N4S PDB:1S64 PDB:1TNB PDB:1TNO PDB:1TNU PDB:1TNY
PDB:1TNZ PDBsum:1N4P PDBsum:1N4Q PDBsum:1N4R PDBsum:1N4S
PDBsum:1S64 PDBsum:1TNB PDBsum:1TNO PDBsum:1TNU PDBsum:1TNY
PDBsum:1TNZ GeneTree:ENSGT00530000063392 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 KO:K11713 OMA:FILSTQD
OrthoDB:EOG4KD6MC EMBL:L24116 IPI:IPI00211844 PIR:B53044
RefSeq:NP_112344.1 UniGene:Rn.10031 ProteinModelPortal:P53610
SMR:P53610 IntAct:P53610 Ensembl:ENSRNOT00000004723 GeneID:81746
KEGG:rno:81746 UCSC:RGD:621754 InParanoid:P53610 BindingDB:P53610
ChEMBL:CHEMBL3989 EvolutionaryTrace:P53610 NextBio:615482
Genevestigator:P53610 GermOnline:ENSRNOG00000003541 Uniprot:P53610
Length = 377
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 85/192 (44%), Positives = 118/192 (61%)
Query: 36 LRSFTTPCFSFKCTLADG-DCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGA 94
LR+ SF C + +G + DMRFV+CA ICY+L++WSGMD + + +I RS+SYD
Sbjct: 151 LRALQLEDGSF-CAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAISYIRRSMSYDNG 209
Query: 95 FGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFYSPQIESLKRWLI 154
QG LESHGGST+C +ASL LM KL+ + F ++ +KRW I
Sbjct: 210 LAQGAGLESHGGSTFCGIASLCLMGKLEEV----------------FSEKELNRIKRWCI 253
Query: 155 FRQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQ-HMTGGLSKWS 213
RQ++G+ GRPNKPVDTCY+FW+GA+L +L + + E+ +L TQ + GG +KW
Sbjct: 254 MRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQDRLVGGFAKWP 313
Query: 214 DTQADILHTYLG 225
D+ D LH Y G
Sbjct: 314 DSHPDALHAYFG 325
Score = 218 (81.8 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 37/80 (46%), Positives = 54/80 (67%)
Query: 237 QIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVLDTQ- 295
++ +KRW I RQ++G+ GRPNKPVDTCY+FW+GA+L +L + + E+ +L TQ
Sbjct: 244 ELNRIKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQD 303
Query: 296 HMTGGLSKWSDTQADILHTY 315
+ GG +KW D+ D LH Y
Sbjct: 304 RLVGGFAKWPDSHPDALHAY 323
Score = 55 (24.4 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 23/83 (27%), Positives = 37/83 (44%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSY-DGAFGQGP-CLESHGGSTYC 110
G M + +C I + DD S +D+ CL + R+L DG+F P E+ YC
Sbjct: 120 GHIAMTYTGLSCLII-LGDDLSRVDKEACLAGL-RALQLEDGSFCAVPEGSENDMRFVYC 177
Query: 111 ALASLALMNKLDTLRPTQASLYL 133
A ++N + +A Y+
Sbjct: 178 ASCICYMLNNWSGMDMKKAISYI 200
>MGI|MGI:1917514 [details] [associations]
symbol:Pggt1b "protein geranylgeranyltransferase type I,
beta subunit" species:10090 "Mus musculus" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0004662 "CAAX-protein geranylgeranyltransferase
activity" evidence=ISO] [GO:0005953 "CAAX-protein
geranylgeranyltransferase complex" evidence=ISO] [GO:0008144 "drug
binding" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0019840 "isoprenoid binding" evidence=ISO] [GO:0034097
"response to cytokine stimulus" evidence=ISO] [GO:0042277 "peptide
binding" evidence=ISO] [GO:0045787 "positive regulation of cell
cycle" evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051771 "negative regulation of nitric-oxide synthase
biosynthetic process" evidence=ISO] InterPro:IPR001330 Pfam:PF00432
MGI:MGI:1917514 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872
GO:GO:0008144 GO:GO:0008284 GO:GO:0008270 GO:GO:0034097
GO:GO:0008152 GO:GO:0042277 GO:GO:0045787 eggNOG:COG5029
GO:GO:0004662 GO:GO:0019840 GeneTree:ENSGT00530000063392 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 KO:K11713 OMA:FILSTQD
OrthoDB:EOG4KD6MC EMBL:AK081731 IPI:IPI00225757 RefSeq:NP_766215.1
UniGene:Mm.262096 UniGene:Mm.393044 ProteinModelPortal:Q8BUY9
SMR:Q8BUY9 STRING:Q8BUY9 PhosphoSite:Q8BUY9 PaxDb:Q8BUY9
PRIDE:Q8BUY9 Ensembl:ENSMUST00000025354 GeneID:225467
KEGG:mmu:225467 UCSC:uc008evk.1 InParanoid:Q8BUY9 BindingDB:Q8BUY9
ChEMBL:CHEMBL2295 NextBio:377678 Bgee:Q8BUY9 Genevestigator:Q8BUY9
GermOnline:ENSMUSG00000024477 Uniprot:Q8BUY9
Length = 377
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 85/192 (44%), Positives = 118/192 (61%)
Query: 36 LRSFTTPCFSFKCTLADG-DCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGA 94
LR+ SF C + +G + DMRFV+CA ICY+L++WSGMD + + +I RS+SYD
Sbjct: 151 LRALQLEDGSF-CAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAISYIRRSMSYDNG 209
Query: 95 FGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFYSPQIESLKRWLI 154
QG LESHGGST+C +ASL LM KL+ + F ++ +KRW I
Sbjct: 210 LAQGAGLESHGGSTFCGIASLCLMGKLEEV----------------FSEKELNRIKRWCI 253
Query: 155 FRQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQ-HMTGGLSKWS 213
RQ++G+ GRPNKPVDTCY+FW+GA+L +L + + E+ +L TQ + GG +KW
Sbjct: 254 MRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQDRLVGGFAKWP 313
Query: 214 DTQADILHTYLG 225
D+ D LH Y G
Sbjct: 314 DSHPDALHAYFG 325
Score = 218 (81.8 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
Identities = 37/80 (46%), Positives = 54/80 (67%)
Query: 237 QIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVLDTQ- 295
++ +KRW I RQ++G+ GRPNKPVDTCY+FW+GA+L +L + + E+ +L TQ
Sbjct: 244 ELNRIKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQD 303
Query: 296 HMTGGLSKWSDTQADILHTY 315
+ GG +KW D+ D LH Y
Sbjct: 304 RLVGGFAKWPDSHPDALHAY 323
Score = 51 (23.0 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
Identities = 22/83 (26%), Positives = 36/83 (43%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSY-DGAFGQGP-CLESHGGSTYC 110
G M + +C I + DD +D+ CL + R+L DG+F P E+ YC
Sbjct: 120 GHIAMTYTGLSCLII-LGDDLGRVDKEACLAGL-RALQLEDGSFCAVPEGSENDMRFVYC 177
Query: 111 ALASLALMNKLDTLRPTQASLYL 133
A ++N + +A Y+
Sbjct: 178 ASCICYMLNNWSGMDMKKAISYI 200
>UNIPROTKB|Q5EAD5 [details] [associations]
symbol:PGGT1B "Geranylgeranyl transferase type-1 subunit
beta" species:9913 "Bos taurus" [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001330 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008152
eggNOG:COG5029 GO:GO:0004662 EMBL:BT020634 IPI:IPI00715065
RefSeq:NP_001015560.1 UniGene:Bt.17618 ProteinModelPortal:Q5EAD5
SMR:Q5EAD5 PRIDE:Q5EAD5 GeneID:509322 KEGG:bta:509322 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 InParanoid:Q5EAD5 KO:K11713
BindingDB:Q5EAD5 ChEMBL:CHEMBL4347 NextBio:20868922 Uniprot:Q5EAD5
Length = 377
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 85/192 (44%), Positives = 118/192 (61%)
Query: 36 LRSFTTPCFSFKCTLADG-DCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGA 94
LR+ SF C + +G + DMRFV+CA ICY+L++WSGMD + + +I RS+SYD
Sbjct: 151 LRALQLEDGSF-CAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAINYIRRSMSYDNG 209
Query: 95 FGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFYSPQIESLKRWLI 154
QG LESHGGST+C +ASL LM KL+ + F ++ +KRW I
Sbjct: 210 LAQGAGLESHGGSTFCGIASLCLMGKLEEV----------------FSEKELNRIKRWCI 253
Query: 155 FRQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQ-HMTGGLSKWS 213
RQ++G+ GRPNKPVDTCY+FW+GA+L +L + + E+ +L TQ + GG +KW
Sbjct: 254 MRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQDRLVGGFAKWP 313
Query: 214 DTQADILHTYLG 225
D+ D LH Y G
Sbjct: 314 DSHPDALHAYFG 325
Score = 218 (81.8 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 37/80 (46%), Positives = 54/80 (67%)
Query: 237 QIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVLDTQ- 295
++ +KRW I RQ++G+ GRPNKPVDTCY+FW+GA+L +L + + E+ +L TQ
Sbjct: 244 ELNRIKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQD 303
Query: 296 HMTGGLSKWSDTQADILHTY 315
+ GG +KW D+ D LH Y
Sbjct: 304 RLVGGFAKWPDSHPDALHAY 323
>UNIPROTKB|F1RLE8 [details] [associations]
symbol:PGGT1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0008152 GeneTree:ENSGT00530000063392
OMA:FILSTQD EMBL:CU693413 EMBL:CU694231 Ensembl:ENSSSCT00000015533
Uniprot:F1RLE8
Length = 318
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 85/192 (44%), Positives = 118/192 (61%)
Query: 36 LRSFTTPCFSFKCTLADG-DCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGA 94
LR+ SF C + +G + DMRFV+CA ICY+L++WSGMD + + +I RS+SYD
Sbjct: 92 LRALQLEDGSF-CAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAISYIRRSMSYDNG 150
Query: 95 FGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFYSPQIESLKRWLI 154
QG LESHGGST+C +ASL LM KL+ + F ++ +KRW I
Sbjct: 151 LAQGAGLESHGGSTFCGIASLCLMGKLEEV----------------FSEKELNRIKRWCI 194
Query: 155 FRQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQ-HMTGGLSKWS 213
RQ++G+ GRPNKPVDTCY+FW+GA+L +L + + E+ +L TQ + GG +KW
Sbjct: 195 MRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQDRLVGGFAKWP 254
Query: 214 DTQADILHTYLG 225
D+ D LH Y G
Sbjct: 255 DSHPDALHAYFG 266
Score = 218 (81.8 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 37/80 (46%), Positives = 54/80 (67%)
Query: 237 QIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVLDTQ- 295
++ +KRW I RQ++G+ GRPNKPVDTCY+FW+GA+L +L + + E+ +L TQ
Sbjct: 185 ELNRIKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQD 244
Query: 296 HMTGGLSKWSDTQADILHTY 315
+ GG +KW D+ D LH Y
Sbjct: 245 RLVGGFAKWPDSHPDALHAY 264
>UNIPROTKB|P53609 [details] [associations]
symbol:PGGT1B "Geranylgeranyl transferase type-1 subunit
beta" species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004662 "CAAX-protein geranylgeranyltransferase
activity" evidence=IEA] [GO:0005953 "CAAX-protein
geranylgeranyltransferase complex" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0034097 "response to cytokine stimulus" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0051771 "negative regulation of nitric-oxide synthase
biosynthetic process" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=TAS] InterPro:IPR001330 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008144
GO:GO:0008284 GO:GO:0008270 GO:GO:0034097 GO:GO:0042277
GO:GO:0045787 eggNOG:COG5029 DrugBank:DB00175 GO:GO:0005953
GO:GO:0004662 GO:GO:0018344 GO:GO:0019840 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 KO:K11713 OMA:FILSTQD
EMBL:L25441 EMBL:AY780790 EMBL:AC008494 IPI:IPI00022759
IPI:IPI00549741 PIR:A53044 RefSeq:NP_005014.2 UniGene:Hs.254006
ProteinModelPortal:P53609 SMR:P53609 STRING:P53609
PhosphoSite:P53609 DMDM:259016302 PaxDb:P53609 PRIDE:P53609
DNASU:5229 Ensembl:ENST00000379615 Ensembl:ENST00000419445
GeneID:5229 KEGG:hsa:5229 UCSC:uc003kqw.4 UCSC:uc010jch.3
GeneCards:GC05M114575 H-InvDB:HIX0032034 HGNC:HGNC:8895
HPA:HPA030646 MIM:602031 neXtProt:NX_P53609 PharmGKB:PA33233
InParanoid:P53609 OrthoDB:EOG4KD6MC PhylomeDB:P53609
BindingDB:P53609 ChEMBL:CHEMBL4135 GenomeRNAi:5229 NextBio:20214
Bgee:P53609 CleanEx:HS_PGGT1B Genevestigator:P53609
GermOnline:ENSG00000164219 Uniprot:P53609
Length = 377
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 85/192 (44%), Positives = 118/192 (61%)
Query: 36 LRSFTTPCFSFKCTLADG-DCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGA 94
LR+ SF C + +G + DMRFV+CA ICY+L++WSGMD + + +I RS+SYD
Sbjct: 151 LRALQLEDGSF-CAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAITYIRRSMSYDNG 209
Query: 95 FGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFYSPQIESLKRWLI 154
QG LESHGGST+C +ASL LM KL+ + F ++ +KRW I
Sbjct: 210 LAQGAGLESHGGSTFCGIASLCLMGKLEEV----------------FSEKELNRIKRWCI 253
Query: 155 FRQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQ-HMTGGLSKWS 213
RQ++G+ GRPNKPVDTCY+FW+GA+L +L + + E+ +L TQ + GG +KW
Sbjct: 254 MRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQDRLVGGFAKWP 313
Query: 214 DTQADILHTYLG 225
D+ D LH Y G
Sbjct: 314 DSHPDALHAYFG 325
Score = 218 (81.8 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 37/80 (46%), Positives = 54/80 (67%)
Query: 237 QIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVLDTQ- 295
++ +KRW I RQ++G+ GRPNKPVDTCY+FW+GA+L +L + + E+ +L TQ
Sbjct: 244 ELNRIKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQD 303
Query: 296 HMTGGLSKWSDTQADILHTY 315
+ GG +KW D+ D LH Y
Sbjct: 304 RLVGGFAKWPDSHPDALHAY 323
>FB|FBgn0015000 [details] [associations]
symbol:betaggt-I "beta subunit of type I geranylgeranyl
transferase" species:7227 "Drosophila melanogaster" [GO:0004661
"protein geranylgeranyltransferase activity" evidence=ISS]
[GO:0007265 "Ras protein signal transduction" evidence=ISS]
[GO:0004662 "CAAX-protein geranylgeranyltransferase activity"
evidence=NAS] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0022008 InterPro:IPR008930
SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0035050 GO:GO:0004661
HSSP:P53610 EMBL:U43587 ProteinModelPortal:Q24172 SMR:Q24172
STRING:Q24172 PaxDb:Q24172 PRIDE:Q24172 FlyBase:FBgn0015000
InParanoid:Q24172 OrthoDB:EOG489333 ArrayExpress:Q24172 Bgee:Q24172
Uniprot:Q24172
Length = 395
Score = 250 (93.1 bits), Expect = 3.1e-38, Sum P(2) = 3.1e-38
Identities = 49/86 (56%), Positives = 56/86 (65%)
Query: 232 RIIKTQIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSV 291
R+ T +E +KRWLIFRQ GFQGRPNKPVDTCY+FWIGASL ILN D R +
Sbjct: 229 RLDATTVERMKRWLIFRQMDGFQGRPNKPVDTCYSFWIGASLCILNGFELTDYARNREFI 288
Query: 292 LDTQH-MTGGLSKWSDTQADILHTYL 316
L TQ + GG +KW D HTYL
Sbjct: 289 LSTQDKLIGGFAKWPQATPDPFHTYL 314
Score = 249 (92.7 bits), Expect = 5.9e-38, Sum P(2) = 5.9e-38
Identities = 48/81 (59%), Positives = 54/81 (66%)
Query: 146 IESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQH- 204
+E +KRWLIFRQ GFQGRPNKPVDTCY+FWIGASL ILN D R +L TQ
Sbjct: 235 VERMKRWLIFRQMDGFQGRPNKPVDTCYSFWIGASLCILNGFELTDYARNREFILSTQDK 294
Query: 205 MTGGLSKWSDTQADILHTYLG 225
+ GG +KW D HTYLG
Sbjct: 295 LIGGFAKWPQATPDPFHTYLG 315
Score = 193 (73.0 bits), Expect = 3.1e-38, Sum P(2) = 3.1e-38
Identities = 42/104 (40%), Positives = 60/104 (57%)
Query: 24 LALVYRLQISTSLRSFTTPCFSFKCTLADGDCDMRFVFCACSICYILDDWSGMDRARCLE 83
L+ + R I + + P SF + + DMRFV+CA +ICY+LD W +++ +
Sbjct: 130 LSRLDRKSIVDGVAAVQKPEGSFSACIDGSEDDMRFVYCAATICYMLDYWGDVNKETMFQ 189
Query: 84 FIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPT 127
FI RSL YD F Q E+HGG+T+CALA+L L +L L T
Sbjct: 190 FITRSLRYDYGFSQELEGEAHGGTTFCALAALHLSGQLHRLDAT 233
>UNIPROTKB|F1N4H5 [details] [associations]
symbol:PGGT1B "Geranylgeranyl transferase type-1 subunit
beta" species:9913 "Bos taurus" [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008152
GeneTree:ENSGT00530000063392 IPI:IPI00715065 OMA:FILSTQD
EMBL:DAAA02027677 EMBL:DAAA02027678 EMBL:DAAA02027679
EMBL:DAAA02027680 Ensembl:ENSBTAT00000002466 Uniprot:F1N4H5
Length = 377
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 80/192 (41%), Positives = 113/192 (58%)
Query: 36 LRSFTTPCFSFKCTLADG-DCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGA 94
LR+ SF C + +G + DMRFV+CA ICY+L++WSGMD + + +I RS+SYD
Sbjct: 151 LRALQLEDGSF-CAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAINYIRRSMSYDNG 209
Query: 95 FGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFYSPQIESLKRWLI 154
QG LESHGGST+C +ASL LM KL+ + F ++ +KRW I
Sbjct: 210 LAQGAGLESHGGSTFCGIASLCLMGKLEEV----------------FSEKELNRIKRWCI 253
Query: 155 FRQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQH-MTGGLSKWS 213
RQ++G+ GRPNKPVDTCY+FW+GA+L + + E S++ Q + G W
Sbjct: 254 MRQQNGYHGRPNKPVDTCYSFWVGATLKVREIIKMRNFESNKTSIISIQEKILGAFLYWC 313
Query: 214 DTQADILHTYLG 225
++ +D LH Y G
Sbjct: 314 NSHSDALHAYFG 325
Score = 185 (70.2 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 237 QIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVLDTQH 296
++ +KRW I RQ++G+ GRPNKPVDTCY+FW+GA+L + + E S++ Q
Sbjct: 244 ELNRIKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKVREIIKMRNFESNKTSIISIQE 303
Query: 297 -MTGGLSKWSDTQADILHTY 315
+ G W ++ +D LH Y
Sbjct: 304 KILGAFLYWCNSHSDALHAY 323
>TAIR|locus:2039752 [details] [associations]
symbol:PGGT-I species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IMP;IDA] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IPI]
[GO:0018344 "protein geranylgeranylation" evidence=IMP;IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0009737
"response to abscisic acid stimulus" evidence=IMP] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=TAS] InterPro:IPR001330 Pfam:PF00432 GO:GO:0009737
EMBL:CP002685 GO:GO:0009733 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0009414 EMBL:AC004218 GO:GO:0009788 eggNOG:COG5029
GO:GO:0004662 GO:GO:0018344 KO:K11713 HSSP:P53610 OMA:PDLYHSY
EMBL:BT002465 EMBL:BT008464 IPI:IPI00537488 PIR:T00565
RefSeq:NP_181487.1 UniGene:At.16938 ProteinModelPortal:O80642
SMR:O80642 STRING:O80642 PaxDb:O80642 PRIDE:O80642
EnsemblPlants:AT2G39550.1 GeneID:818540 KEGG:ath:AT2G39550
TAIR:At2g39550 InParanoid:O80642 PhylomeDB:O80642
ProtClustDB:CLSN2683354 BioCyc:MetaCyc:AT2G39550-MONOMER
ArrayExpress:O80642 Genevestigator:O80642 Uniprot:O80642
Length = 375
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 78/177 (44%), Positives = 101/177 (57%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCAL 112
G+ D+RFV+CA +ICY+LD WSGMD+ +I SYDG FG P ESHGG+TYCA+
Sbjct: 181 GETDLRFVYCAAAICYMLDSWSGMDKESAKNYILNCQSYDGGFGLIPGSESHGGATYCAI 240
Query: 113 ASLALMNKL--DTLRPTQASLYLDLVKSFLFYSPQIESLKRWLIFRQRS--GFQGRPNKP 168
ASL LM + D L +S +D P + L W + RQ + GFQGR NKP
Sbjct: 241 ASLRLMGYIGVDLLSNDSSSSIID---------PSL--LLNWCLQRQANDGGFQGRTNKP 289
Query: 169 VDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQHMTGGLSKWSDTQADILHTYLG 225
DTCY FWIGA L ++ ID+ L ++ Q GG SK+ D+ H+Y G
Sbjct: 290 SDTCYAFWIGAVLKLIGGDALIDKMALRKFLMSCQSKYGGFSKFPGQLPDLYHSYYG 346
Score = 161 (61.7 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 33/77 (42%), Positives = 43/77 (55%)
Query: 241 LKRWLIFRQRS--GFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVLDTQHMT 298
L W + RQ + GFQGR NKP DTCY FWIGA L ++ ID+ L ++ Q
Sbjct: 268 LLNWCLQRQANDGGFQGRTNKPSDTCYAFWIGAVLKLIGGDALIDKMALRKFLMSCQSKY 327
Query: 299 GGLSKWSDTQADILHTY 315
GG SK+ D+ H+Y
Sbjct: 328 GGFSKFPGQLPDLYHSY 344
Score = 51 (23.0 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 103 SHGGSTYCALASLALM-NKLDTLRPTQASLYLDLV 136
SH STYCALA L ++ + L T+ SL + ++
Sbjct: 133 SHLASTYCALAILKVIGHDLSTI--DSKSLLISMI 165
>DICTYBASE|DDB_G0269726 [details] [associations]
symbol:pggt1b "protein geranylgeranyltransferase type
I" species:44689 "Dictyostelium discoideum" [GO:0008152 "metabolic
process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004662 "CAAX-protein geranylgeranyltransferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0004659 "prenyltransferase activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 dictyBase:DDB_G0269726
EMBL:AAFI02000005 GenomeReviews:CM000150_GR InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008152 eggNOG:COG5029
GO:GO:0004662 KO:K11713 RefSeq:XP_646228.1 HSSP:P53610
ProteinModelPortal:Q55DA3 GeneID:8617182 KEGG:ddi:DDB_G0269726
OMA:FILSTQD ProtClustDB:CLSZ2431398 Uniprot:Q55DA3
Length = 352
Score = 229 (85.7 bits), Expect = 5.2e-31, Sum P(2) = 5.2e-31
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCAL 112
GD D+R +F AC+I +ILDDWS +++ +++I LSY+ AFGQ P E+HGG TYCA+
Sbjct: 162 GDYDLRHLFSACAISFILDDWSAINKESAIDYIKSCLSYEFAFGQTPQQEAHGGPTYCAI 221
Query: 113 ASLALMNKLDTLRPTQASLYLDLVK 137
ASL+L+ +LD L P + L LVK
Sbjct: 222 ASLSLLGRLDVLEPFKEQLTFWLVK 246
Score = 162 (62.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 38/101 (37%), Positives = 54/101 (53%)
Query: 126 PTQASLY-LDLVKSFLFYSPQIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSIL 184
PT ++ L L+ P E L WL+ +Q +GF GR NK DTCY FWIGASL ++
Sbjct: 216 PTYCAIASLSLLGRLDVLEPFKEQLTFWLVKKQITGFCGRTNKDPDTCYAFWIGASLMMI 275
Query: 185 NAATWIDEERLLLSVLDTQHMT-GGLSKWSDTQADILHTYL 224
+ ID + + QH GG++K D++H+YL
Sbjct: 276 DRYDLIDFASINAFIGSAQHEAIGGVAKEPGQLPDVMHSYL 316
Score = 158 (60.7 bits), Expect = 5.2e-31, Sum P(2) = 5.2e-31
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 239 ESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVLDTQHMT 298
E L WL+ +Q +GF GR NK DTCY FWIGASL +++ ID + + QH
Sbjct: 238 EQLTFWLVKKQITGFCGRTNKDPDTCYAFWIGASLMMIDRYDLIDFASINAFIGSAQHEA 297
Query: 299 -GGLSKWSDTQADILHTYL 316
GG++K D++H+YL
Sbjct: 298 IGGVAKEPGQLPDVMHSYL 316
Score = 40 (19.1 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 24/92 (26%), Positives = 40/92 (43%)
Query: 74 SGMDRARCLEFIFRSLS-YDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLY 132
S ++ + +F RSL+ + G L +H + ++ L L+NK D L +
Sbjct: 3 SCINEEKLAKFFQRSLNALPAPYTSG--LPNHLSLIFFVVSGLDLLNKTDILEKEKQ--- 57
Query: 133 LDLVKSFLFYSPQI-ESLKRWLIFRQRSGFQG 163
D++ YS QI S I + GF+G
Sbjct: 58 -DIIN--WVYSRQILPSKDNPEINLENCGFRG 86
>UNIPROTKB|O18197 [details] [associations]
symbol:Y48E1B.3 "Protein Y48E1B.3, isoform a" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008152 EMBL:Z93393
GeneTree:ENSGT00530000063392 HOGENOM:HOG000180333 KO:K11713
HSSP:P53610 OMA:FILSTQD GeneID:174999 KEGG:cel:CELE_Y48E1B.3
CTD:174999 PIR:T27022 RefSeq:NP_001254397.1
ProteinModelPortal:O18197 SMR:O18197 DIP:DIP-26836N IntAct:O18197
MINT:MINT-1088947 EnsemblMetazoa:Y48E1B.3a UCSC:Y48E1B.3
WormBase:Y48E1B.3a NextBio:886354 ArrayExpress:O18197
Uniprot:O18197
Length = 360
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 76/175 (43%), Positives = 101/175 (57%)
Query: 54 DCDMRFVFCACSICYILDD--WSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCA 111
+ DMRFVFCA +I +ILD +D + F+ +SL+ DG GQ P ESHGGST+CA
Sbjct: 163 ESDMRFVFCAVAISHILDGDKEQTIDWTKLAGFLRQSLNIDGGIGQAPGDESHGGSTFCA 222
Query: 112 LASLALMNKLDTLRPTQASLYLDLVKSFLFYSPQIESLKRWLIFRQRSGFQGRPNKPVDT 171
+ASLAL N+L T L + I+ L RW I +Q GF GR +KP D+
Sbjct: 223 IASLALSNRLWTEEV--------LTRR------DIDRLIRWAIQKQDIGFHGRAHKPDDS 268
Query: 172 CYTFWIGASLSILNAATWIDEERLLLSVLDTQHM-TGGLSKWSDT--QADILHTY 223
CY FWIGA+L ILNA + ++ L ++ QH GG K+ + +DILHTY
Sbjct: 269 CYAFWIGATLKILNAYHLVSKQHLREFLMICQHPHIGGFCKYPEPGGYSDILHTY 323
Score = 171 (65.3 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 36/86 (41%), Positives = 52/86 (60%)
Query: 233 IIKTQIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVL 292
+ + I+ L RW I +Q GF GR +KP D+CY FWIGA+L ILN+ + ++ L ++
Sbjct: 238 LTRRDIDRLIRWAIQKQDIGFHGRAHKPDDSCYAFWIGATLKILNAYHLVSKQHLREFLM 297
Query: 293 DTQHM-TGGLSKWSDT--QADILHTY 315
QH GG K+ + +DILHTY
Sbjct: 298 ICQHPHIGGFCKYPEPGGYSDILHTY 323
Score = 45 (20.9 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 102 ESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKS 138
E++ TY AL SLA++ D L+ L VK+
Sbjct: 113 EANLAQTYSALLSLAILG--DDLKKVDRKAILKTVKT 147
>WB|WBGene00013002 [details] [associations]
symbol:Y48E1B.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] InterPro:IPR001330
Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0008152 EMBL:Z93393 GeneTree:ENSGT00530000063392 KO:K11713
GeneID:174999 KEGG:cel:CELE_Y48E1B.3 CTD:174999
RefSeq:NP_001254398.1 ProteinModelPortal:B7WNB1 SMR:B7WNB1
EnsemblMetazoa:Y48E1B.3c.1 EnsemblMetazoa:Y48E1B.3c.2
WormBase:Y48E1B.3c ArrayExpress:B7WNB1 Uniprot:B7WNB1
Length = 883
Score = 305 (112.4 bits), Expect = 5.0e-26, P = 5.0e-26
Identities = 76/175 (43%), Positives = 101/175 (57%)
Query: 54 DCDMRFVFCACSICYILDD--WSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCA 111
+ DMRFVFCA +I +ILD +D + F+ +SL+ DG GQ P ESHGGST+CA
Sbjct: 686 ESDMRFVFCAVAISHILDGDKEQTIDWTKLAGFLRQSLNIDGGIGQAPGDESHGGSTFCA 745
Query: 112 LASLALMNKLDTLRPTQASLYLDLVKSFLFYSPQIESLKRWLIFRQRSGFQGRPNKPVDT 171
+ASLAL N+L T L + I+ L RW I +Q GF GR +KP D+
Sbjct: 746 IASLALSNRLWTEEV--------LTRR------DIDRLIRWAIQKQDIGFHGRAHKPDDS 791
Query: 172 CYTFWIGASLSILNAATWIDEERLLLSVLDTQHM-TGGLSKWSDT--QADILHTY 223
CY FWIGA+L ILNA + ++ L ++ QH GG K+ + +DILHTY
Sbjct: 792 CYAFWIGATLKILNAYHLVSKQHLREFLMICQHPHIGGFCKYPEPGGYSDILHTY 846
Score = 171 (65.3 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 36/86 (41%), Positives = 52/86 (60%)
Query: 233 IIKTQIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVL 292
+ + I+ L RW I +Q GF GR +KP D+CY FWIGA+L ILN+ + ++ L ++
Sbjct: 761 LTRRDIDRLIRWAIQKQDIGFHGRAHKPDDSCYAFWIGATLKILNAYHLVSKQHLREFLM 820
Query: 293 DTQHM-TGGLSKWSDT--QADILHTY 315
QH GG K+ + +DILHTY
Sbjct: 821 ICQHPHIGGFCKYPEPGGYSDILHTY 846
Score = 45 (20.9 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 102 ESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKS 138
E++ TY AL SLA++ D L+ L VK+
Sbjct: 636 EANLAQTYSALLSLAILG--DDLKKVDRKAILKTVKT 670
>POMBASE|SPAC2E1P5.04c [details] [associations]
symbol:cwg2 "geranylgeranyltransferase I beta subunit
Cwg2" species:4896 "Schizosaccharomyces pombe" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=IEA]
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=NAS]
[GO:0006612 "protein targeting to membrane" evidence=IC]
[GO:0009250 "glucan biosynthetic process" evidence=IMP] [GO:0018344
"protein geranylgeranylation" evidence=IC] [GO:0034411 "cell wall
(1->3)-beta-D-glucan biosynthetic process" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071963
"establishment or maintenance of cell polarity regulating cell
shape" evidence=IMP] [GO:0004661 "protein geranylgeranyltransferase
activity" evidence=IDA] InterPro:IPR001330 Pfam:PF00432
PomBase:SPAC2E1P5.04c GO:GO:0005829 GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 GO:GO:0006612 GO:GO:0071963 GO:GO:0034411
eggNOG:COG5029 GO:GO:0005953 GO:GO:0004662 GO:GO:0018344
GO:GO:0004663 HOGENOM:HOG000180333 KO:K11713 EMBL:Z12155 PIR:S41686
RefSeq:NP_594142.1 ProteinModelPortal:P32434 STRING:P32434
EnsemblFungi:SPAC2E1P5.04c.1 GeneID:2541514 KEGG:spo:SPAC2E1P5.04c
OMA:HDLRFCY OrthoDB:EOG4WQ4BS NextBio:20802612 Uniprot:P32434
Length = 355
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 72/181 (39%), Positives = 100/181 (55%)
Query: 54 DCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCALA 113
D DMR ++ A +I +LD +S D +++I Y+G F P E+H G+T+CALA
Sbjct: 146 DQDMRQLYMATTIASLLD-FSLSDPLCSIQYIKSCQRYEGGFSLLPYGEAHAGATFCALA 204
Query: 114 SLALMNKL---DTLRPTQASLYL-DLVKSFLFYSPQIESLKRWLIFRQRS--GFQGRPNK 167
S +L+ K+ +L + S L D V P++E L RWL RQ S G GR NK
Sbjct: 205 SWSLILKMIPNSSLNTSNQSYNLMDCV-------PKVERLIRWLASRQLSSGGLNGRTNK 257
Query: 168 PVDTCYTFWIGASLSILNAATWIDE---ERLLLSVLDTQHMTGGLSKWSDTQADILHTYL 224
VDTCY +W+ +SL +L+A +ID E+ LL L QH GG SK D+LH+ L
Sbjct: 258 DVDTCYAYWVLSSLKLLDALPFIDGGELEKYLL--LHAQHALGGFSKTPGEFPDVLHSAL 315
Query: 225 G 225
G
Sbjct: 316 G 316
Score = 165 (63.1 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 43/112 (38%), Positives = 60/112 (53%)
Query: 237 QIESLKRWLIFRQRS--GFQGRPNKPVDTCYTFWIGASLSILNSATWIDE---ERLLLSV 291
++E L RWL RQ S G GR NK VDTCY +W+ +SL +L++ +ID E+ LL
Sbjct: 233 KVERLIRWLASRQLSSGGLNGRTNKDVDTCYAYWVLSSLKLLDALPFIDGGELEKYLL-- 290
Query: 292 LDTQHMTGGLSKWSDTQADILHTYLE--AMSHASRNKLKERNFQLPLDKKDI 341
L QH GG SK D+LH+ L AM++ + N + + K I
Sbjct: 291 LHAQHALGGFSKTPGEFPDVLHSALGLYAMAYQDDKSFPKVNADIHMTSKYI 342
Score = 40 (19.1 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 60 VFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAF 95
VF C + ++ D+ S +DR F+ + G F
Sbjct: 101 VFSICCLLFLGDNLSRIDRDLIKNFVELCKTSQGHF 136
>SGD|S000006380 [details] [associations]
symbol:BET2 "Beta subunit of Type II
geranylgeranyltransferase" species:4932 "Saccharomyces cerevisiae"
[GO:0018344 "protein geranylgeranylation" evidence=IEA;IDA]
[GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA;IDA] [GO:0005968 "Rab-protein
geranylgeranyltransferase complex" evidence=IDA;IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0006612 "protein targeting to membrane"
evidence=IMP] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IMP] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432 SGD:S000006380
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0006612
EMBL:BK006949 GO:GO:0006888 EMBL:U25842 eggNOG:COG5029
GO:GO:0018344 GO:GO:0004663 GeneTree:ENSGT00530000063392
HOGENOM:HOG000180334 KO:K05956 PANTHER:PTHR11774:SF5 GO:GO:0005968
OrthoDB:EOG43V34B EMBL:M29585 EMBL:M26597 EMBL:AY558067 PIR:S59834
RefSeq:NP_015502.1 ProteinModelPortal:P20133 SMR:P20133
DIP:DIP-2214N IntAct:P20133 MINT:MINT-642059 STRING:P20133
PaxDb:P20133 EnsemblFungi:YPR176C GeneID:856306 KEGG:sce:YPR176C
CYGD:YPR176c OMA:ERQDYES NextBio:981673 Genevestigator:P20133
GermOnline:YPR176C Uniprot:P20133
Length = 325
Score = 233 (87.1 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 57/176 (32%), Positives = 86/176 (48%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCAL 112
G+ D RFV+ A S IL + + ++F+ + ++DG FG P ESH + L
Sbjct: 132 GEVDTRFVYTALSALSILGELTSEVVDPAVDFVLKCYNFDGGFGLCPNAESHAAQAFTCL 191
Query: 113 ASLALMNKLDTLRPTQASLYLDLVKSFLFYSPQIESLKRWLIFRQ--RSGFQGRPNKPVD 170
+LA+ NKLD L Q+E + WL RQ G GRP+K D
Sbjct: 192 GALAIANKLDMLS-----------------DDQLEEIGWWLCERQLPEGGLNGRPSKLPD 234
Query: 171 TCYTFWIGASLSILNAATWIDEERLLLSVLDTQ-HMTGGLSKWSDTQADILHTYLG 225
CY++W+ +SL+I+ WI+ E+L +L Q GG+S + + D+ HT G
Sbjct: 235 VCYSWWVLSSLAIIGRLDWINYEKLTEFILKCQDEKKGGISDRPENEVDVFHTVFG 290
Score = 179 (68.1 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 68/259 (26%), Positives = 113/259 (43%)
Query: 65 SICYILDDWSGMDRARCLEFIFRSLSYD-GAFGQGPCLESHGGSTYCALASLALMNKLDT 123
++C +LD + + F+ GAF P ++H +T A+ LA + LD
Sbjct: 45 ALC-VLDSPETFVKEEVISFVLSCWDDKYGAFAPFPRHDAHLLTTLSAVQILATYDALDV 103
Query: 124 LRPTQASLYLDLVKSFLFYSPQIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSI 183
L + + ++ Q+E FQG VDT + + ++LSI
Sbjct: 104 LGKDRKVRLISFIRG-----NQLED----------GSFQGDRFGEVDTRFVYTALSALSI 148
Query: 184 LNAATWIDEERLLLSVLDTQHMTGG--LSKWSDTQADILHTYLGEFFVRPRI---IKTQI 238
L T + + VL + GG L +++ A T LG + ++ Q+
Sbjct: 149 LGELTSEVVDPAVDFVLKCYNFDGGFGLCPNAESHAAQAFTCLGALAIANKLDMLSDDQL 208
Query: 239 ESLKRWLIFRQ--RSGFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVLDTQ- 295
E + WL RQ G GRP+K D CY++W+ +SL+I+ WI+ E+L +L Q
Sbjct: 209 EEIGWWLCERQLPEGGLNGRPSKLPDVCYSWWVLSSLAIIGRLDWINYEKLTEFILKCQD 268
Query: 296 HMTGGLSKWSDTQADILHT 314
GG+S + + D+ HT
Sbjct: 269 EKKGGISDRPENEVDVFHT 287
>TAIR|locus:2177058 [details] [associations]
symbol:RGTB1 "RAB geranylgeranyl transferase beta subunit
1" species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432 GO:GO:0005829
EMBL:CP002688 GenomeReviews:BA000015_GR InterPro:IPR008930
SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663
HOGENOM:HOG000180334 KO:K05956 PANTHER:PTHR11774:SF5 HSSP:Q08603
EMBL:BT004816 EMBL:BT004818 EMBL:AK227802 IPI:IPI00534125
RefSeq:NP_568259.1 UniGene:At.46789 ProteinModelPortal:Q84J75
STRING:Q84J75 PaxDb:Q84J75 PRIDE:Q84J75 EnsemblPlants:AT5G12210.1
GeneID:831094 KEGG:ath:AT5G12210 TAIR:At5g12210 InParanoid:Q84J75
OMA:ADSICEY PhylomeDB:Q84J75 ProtClustDB:PLN03201
Genevestigator:Q84J75 Uniprot:Q84J75
Length = 321
Score = 192 (72.6 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 53/195 (27%), Positives = 95/195 (48%)
Query: 161 FQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQHMTGGL--SKWSDTQAD 218
F G +DT +++ LSIL I+ E+ + ++ +++ GG + +++ A
Sbjct: 127 FSGDMWGEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLDGGFGCTPGAESHAG 186
Query: 219 ILHTYLGEFFVRPRIIKTQIESLKRWLIFRQ--RSGFQGRPNKPVDTCYTFWIGASLSIL 276
+ +G + + +SL WL RQ G GRP K D CY++W+ +SL ++
Sbjct: 187 QIFCCVGALAITGSLHHVDKDSLGWWLCERQLKAGGLNGRPEKLADVCYSWWVLSSLIMI 246
Query: 277 NSATWIDEERLLLSVLDTQHM-TGGLSKWSDTQADILHTYLEAMSHASRNKLKERNFQLP 335
+ WID+ +L+ +LD Q + GG+S + DI HTY A + L+ ++
Sbjct: 247 DRVHWIDKAKLVKFILDCQDLDNGGISDRPEDAVDIFHTYFGV---AGLSLLEYPGVKV- 302
Query: 336 LDKKDIAPLDELERI 350
+D P+D + RI
Sbjct: 303 IDPAYALPVDVVNRI 317
Score = 164 (62.8 bits), Expect = 6.9e-16, Sum P(2) = 6.9e-16
Identities = 33/82 (40%), Positives = 48/82 (58%)
Query: 147 ESLKRWLIFRQ--RSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQH 204
+SL WL RQ G GRP K D CY++W+ +SL +++ WID+ +L+ +LD Q
Sbjct: 207 DSLGWWLCERQLKAGGLNGRPEKLADVCYSWWVLSSLIMIDRVHWIDKAKLVKFILDCQD 266
Query: 205 M-TGGLSKWSDTQADILHTYLG 225
+ GG+S + DI HTY G
Sbjct: 267 LDNGGISDRPEDAVDIFHTYFG 288
Score = 96 (38.9 bits), Expect = 6.9e-16, Sum P(2) = 6.9e-16
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCAL 112
G+ D RF + A IL ++ + +++I + DG FG P ESH G +C +
Sbjct: 133 GEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLDGGFGCTPGAESHAGQIFCCV 192
Query: 113 ASLALMNKL 121
+LA+ L
Sbjct: 193 GALAITGSL 201
Score = 53 (23.7 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 16/80 (20%), Positives = 35/80 (43%)
Query: 54 DCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCALA 113
D + + A I + D + +D + ++ + + DG+F E +Y A+
Sbjct: 86 DPHILYTLSAVQILALFDKINILDIGKVSSYVAKLQNEDGSFSGDMWGEIDTRFSYIAIC 145
Query: 114 SLALMNKLDTLRPTQASLYL 133
L+++ LD + +A Y+
Sbjct: 146 CLSILKCLDKINVEKAVKYI 165
Score = 39 (18.8 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 18/89 (20%), Positives = 34/89 (38%)
Query: 45 SFKCTLADGDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESH 104
SF+ + D M + + +LD + + ++ G F + H
Sbjct: 30 SFESVVMD-HLRMNGAYWGLTTLDLLDKLGCVSEEEVISWLMTCQHESGGFAGNTGHDPH 88
Query: 105 GGSTYCALASLALMNKLDTLRPTQASLYL 133
T A+ LAL +K++ L + S Y+
Sbjct: 89 ILYTLSAVQILALFDKINILDIGKVSSYV 117
>CGD|CAL0000126 [details] [associations]
symbol:BET2 species:5476 "Candida albicans" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=IEA] [GO:0006612 "protein targeting to membrane"
evidence=IEA] [GO:0070317 "negative regulation of G0 to G1
transition" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] [GO:0018344 "protein geranylgeranylation"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
CGD:CAL0000126 InterPro:IPR008930 SUPFAM:SSF48239 EMBL:AACQ01000032
GO:GO:0018344 GO:GO:0004663 HOGENOM:HOG000180334 KO:K05956
PANTHER:PTHR11774:SF5 RefSeq:XP_719325.1 ProteinModelPortal:Q5ACS9
STRING:Q5ACS9 GeneID:3639025 KEGG:cal:CaO19.7563 Uniprot:Q5ACS9
Length = 341
Score = 213 (80.0 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 59/174 (33%), Positives = 82/174 (47%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCAL 112
G+ D RFV+ A S +L+ + FI + ++DG FG P ESH + +
Sbjct: 145 GEVDTRFVYTAVSSLSLLNALTDSIADTASAFIMQCFNFDGGFGLIPGSESHAAQVFTCV 204
Query: 113 ASLALMNKLDTLRPTQASLYLDLVKSFLFYSPQIESLKRWLIFRQ---RSGFQGRPNKPV 169
+LA+MNKLD L + L I+ WL RQ GF GRP K
Sbjct: 205 GALAIMNKLDLLDVENKKVKL------------ID----WLTERQVLPSGGFNGRPEKLP 248
Query: 170 DTCYTFWIGASLSILNAATWIDEERLLLSVLDTQHM-TGGLSKWSDTQADILHT 222
D CY++W+ +SLSIL W+D + L +L Q + GG S Q D+ HT
Sbjct: 249 DVCYSWWVLSSLSILKRKNWVDLKILENFILTCQDLENGGFSDRPGNQTDVYHT 302
>ASPGD|ASPL0000027483 [details] [associations]
symbol:AN5760 species:162425 "Emericella nidulans"
[GO:0018344 "protein geranylgeranylation" evidence=IEA] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IEA]
[GO:0004662 "CAAX-protein geranylgeranyltransferase activity"
evidence=IEA] InterPro:IPR001330 Pfam:PF00432 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0008152 EMBL:BN001305
HOGENOM:HOG000180333 EnsemblFungi:CADANIAT00003299 OMA:PDLYHSY
Uniprot:C8VFH7
Length = 446
Score = 151 (58.2 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 31/70 (44%), Positives = 41/70 (58%)
Query: 157 QRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLD-TQHMTGGLSKWSDT 215
Q +GF GR NK DTCY+FW A+L +L + +D ER +L TQH+ GG K
Sbjct: 338 QWAGFNGRCNKYADTCYSFWNAATLDMLGRLSMVDAERNRRYLLQKTQHLVGGFGKSVGE 397
Query: 216 QADILHTYLG 225
D+LH+Y G
Sbjct: 398 LPDLLHSYFG 407
Score = 148 (57.2 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 32/75 (42%), Positives = 43/75 (57%)
Query: 249 QRSGFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVLD-TQHMTGGLSKWSDT 307
Q +GF GR NK DTCY+FW A+L +L + +D ER +L TQH+ GG K
Sbjct: 338 QWAGFNGRCNKYADTCYSFWNAATLDMLGRLSMVDAERNRRYLLQKTQHLVGGFGKSVGE 397
Query: 308 QADILHTYLEAMSHA 322
D+LH+Y +S A
Sbjct: 398 LPDLLHSYFGMVSLA 412
Score = 113 (44.8 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 90 SYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFYSPQIESL 149
+YDG +GP E+H G TYCA+ +L +N++ + S + LV S Q ESL
Sbjct: 214 AYDGGMAEGPYCEAHSGHTYCAVNTLTFLNRV-----SDDSWRVPLVSPG---SHQFESL 265
Query: 150 KRWLIFRQ 157
RWL+ RQ
Sbjct: 266 VRWLVSRQ 273
Score = 80 (33.2 bits), Expect = 7.9e-13, Sum P(3) = 7.9e-13
Identities = 28/103 (27%), Positives = 48/103 (46%)
Query: 22 GVLALVYRLQI-STSLRSFTTPCFSFKCTLADGDC----DMRFVFCACSICYIL-DDWSG 75
G + +Y+ Q+ S R FT F + + + ++ F A I IL DD S
Sbjct: 62 GYIEWIYQCQVPSGGFRGFTGTDFGTELRTPENEAWDPANVPSTFFALVILLILGDDLSR 121
Query: 76 MDRARCLEFIFRSLSYDGAFGQ--GP--CLESHGGSTYCALAS 114
+ R CL+++ + +G+FG+ GP +E G +C A+
Sbjct: 122 VKRTECLKWLRKMQRPNGSFGEVLGPDESVEGGGDLRFCCFAA 164
Score = 47 (21.6 bits), Expect = 7.9e-13, Sum P(3) = 7.9e-13
Identities = 9/13 (69%), Positives = 10/13 (76%)
Query: 237 QIESLKRWLIFRQ 249
Q ESL RWL+ RQ
Sbjct: 261 QFESLVRWLVSRQ 273
>DICTYBASE|DDB_G0290671 [details] [associations]
symbol:rabggtb "protein geranylgeranyltransferase
type II" species:44689 "Dictyostelium discoideum" [GO:0018344
"protein geranylgeranylation" evidence=IEA;ISS] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA;ISS] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005968 "Rab-protein
geranylgeranyltransferase complex" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
dictyBase:DDB_G0290671 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 GenomeReviews:CM000154_GR EMBL:AAFI02000164
eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663 KO:K05956 OMA:ESHAGLI
PANTHER:PTHR11774:SF5 GO:GO:0005968 RefSeq:XP_001733035.1
ProteinModelPortal:B0G172 SMR:B0G172 STRING:B0G172
EnsemblProtists:DDB0233949 GeneID:8627741 KEGG:ddi:DDB_G0290671
Uniprot:B0G172
Length = 339
Score = 207 (77.9 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 67/264 (25%), Positives = 119/264 (45%)
Query: 57 MRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCALASLA 116
M ++ S Y+L +D+ ++++ +G FG + H ST A+ L
Sbjct: 51 MNGMYWGLSSLYLLKSLDKLDKNEVIQWLLSCQKSNGGFGGNTSHDDHLLSTLSAVQILI 110
Query: 117 LMNKLDTLRPTQASLYLDLVKSFLFYSPQIESLKRWLIFRQRSGFQGRPNKPVDTCYTFW 176
+ LD + D + S + Y +++ R+ F G VDT +++
Sbjct: 111 QYDALDKI---------D-INSVVDYVVKLQ--------REDGSFVGDQWGEVDTRFSYA 152
Query: 177 IGASLSILNAATWIDEERLLLSVLDTQHMTGGLSK--WSDTQADILHTYLGEFFVRPRII 234
LS+L + I+ E+ + +L Q+ GG +++ A + T +G + I
Sbjct: 153 AIMCLSLLKSLDKINCEKAVEYILSCQNFDGGFGSIPGAESHAGQIFTCVGALSILNEIN 212
Query: 235 KTQIESLKRWLIFRQ--RSGFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVL 292
K I+ L WL RQ G GRP K D CY++W+ ++LS ++ WID ++L +L
Sbjct: 213 KIDIDKLGWWLSERQLPNGGLNGRPEKSSDVCYSWWVLSALSAIDRLHWIDNDKLKSYIL 272
Query: 293 DTQ-HMTGGLSKWSDTQADILHTY 315
Q + TGG++ D+ HT+
Sbjct: 273 KCQDNETGGIADKPGDIPDVFHTF 296
Score = 147 (56.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 35/100 (35%), Positives = 53/100 (53%)
Query: 146 IESLKRWLIFRQ--RSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQ 203
I+ L WL RQ G GRP K D CY++W+ ++LS ++ WID ++L +L Q
Sbjct: 216 IDKLGWWLSERQLPNGGLNGRPEKSSDVCYSWWVLSALSAIDRLHWIDNDKLKSYILKCQ 275
Query: 204 -HMTGGLSKWSDTQADILHTYLGEFFVRPR-IIKTQIESL 241
+ TGG++ D+ HT+ G + K QIES+
Sbjct: 276 DNETGGIADKPGDIPDVFHTFFGICGLSLMGYFKDQIESI 315
Score = 105 (42.0 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 19/72 (26%), Positives = 39/72 (54%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCAL 112
G+ D RF + A +L ++ + +E+I ++DG FG P ESH G + +
Sbjct: 143 GEVDTRFSYAAIMCLSLLKSLDKINCEKAVEYILSCQNFDGGFGSIPGAESHAGQIFTCV 202
Query: 113 ASLALMNKLDTL 124
+L+++N+++ +
Sbjct: 203 GALSILNEINKI 214
>UNIPROTKB|D3DQ78 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9606 "Homo sapiens" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 InterPro:IPR008930 SUPFAM:SSF48239
EMBL:CH471059 EMBL:AL357314 GO:GO:0018344 GO:GO:0004663
PANTHER:PTHR11774:SF5 UniGene:Hs.78948 HGNC:HGNC:9796
ChiTaRS:RABGGTB IPI:IPI01013423 SMR:D3DQ78 Ensembl:ENST00000535300
Uniprot:D3DQ78
Length = 157
Score = 144 (55.7 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 42/153 (27%), Positives = 70/153 (45%)
Query: 208 GLSKWSDTQADILHTYLGEFFVRPRIIKTQIESLKRWLIFRQ--RSGFQGRPNKPVDTCY 265
G S++ A ++ G + ++ + + L WL RQ G GRP K D CY
Sbjct: 8 GCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCY 67
Query: 266 TFWIGASLSILNSATWIDEERLLLSVLDTQ-HMTGGLSKWSDTQADILHTYLEAMSHASR 324
++W+ ASL I+ WID E+L +L Q TGG ++D D++ + A
Sbjct: 68 SWWVLASLKIIGRLHWIDREKLRNFILACQDEETGG---FADRPGDMVDPFHTLFGIAGL 124
Query: 325 NKLKERNFQLPLDKKDIAPLDELERIDTNMAFV 357
+ L E + P++ P + L+R++ V
Sbjct: 125 SLLGEEQIK-PVNPVFCMPEEVLQRVNVQPELV 156
Score = 136 (52.9 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 31/77 (40%), Positives = 38/77 (49%)
Query: 152 WLIFRQ--RSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQ-HMTGG 208
WL RQ G GRP K D CY++W+ ASL I+ WID E+L +L Q TGG
Sbjct: 44 WLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGG 103
Query: 209 LSKWSDTQADILHTYLG 225
+ D HT G
Sbjct: 104 FADRPGDMVDPFHTLFG 120
Score = 77 (32.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 89 LSYDGAFGQGPCLESHGGSTYCALASLALMNKL 121
+++DG FG P ESH G YC LA+ ++L
Sbjct: 1 MNFDGGFGCRPGSESHAGQIYCCTGFLAITSQL 33
>ASPGD|ASPL0000011885 [details] [associations]
symbol:AN3747 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005968 "Rab-protein geranylgeranyltransferase
complex" evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase
activity" evidence=IEA] [GO:0006612 "protein targeting to membrane"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0006612 EMBL:BN001302 GO:GO:0006888 GO:GO:0018344
GO:GO:0004663 HOGENOM:HOG000180334 OMA:ESHAGLI
PANTHER:PTHR11774:SF5 EnsemblFungi:CADANIAT00004976 Uniprot:C8V7A2
Length = 334
Score = 206 (77.6 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 65/261 (24%), Positives = 115/261 (44%)
Query: 60 VFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMN 119
V+ + ++L G+ R ++F+ +G FG P ++H T A+ L ++
Sbjct: 51 VYWGLTALHLLGCPDGLPRDNAVDFVLSCQQENGGFGAAPGHDAHLLYTVSAVQILVTLD 110
Query: 120 KLDTLRPTQASLYLDLVKSFLFYSPQIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGA 179
+D L L V SF I L+ ++ F G +DT + +
Sbjct: 111 AVDELEKRGLGGKLK-VGSF------IAGLQD----KETGSFMGDEWGELDTRFLYGALN 159
Query: 180 SLSILNAATWIDEERLLLSVLDTQHMTGG--LSKWSDTQADILHTYLGEFFVRPRIIKTQ 237
+LS+L +D + + V +++ GG ++ +++ A + T +G + R+
Sbjct: 160 ALSLLGLLDLVDVAKAVSYVQRCENLDGGYGVTPGAESHAGQVFTCVGALAIAGRLDLVD 219
Query: 238 IESLKRWLIFRQ--RSGFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVLDTQ 295
+ L WL RQ G GRP K D CY++W+GASL+++ WID +L +L Q
Sbjct: 220 KDRLGGWLSERQLDHGGLNGRPEKLADACYSWWVGASLAMIGKLNWIDGSKLAAYILRCQ 279
Query: 296 HM-TGGLSKWSDTQADILHTY 315
GG + D+ HT+
Sbjct: 280 DPEAGGFADRPGNAVDVFHTH 300
Score = 102 (41.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCAL 112
G+ D RF++ A + +L +D A+ + ++ R + DG +G P ESH G + +
Sbjct: 147 GELDTRFLYGALNALSLLGLLDLVDVAKAVSYVQRCENLDGGYGVTPGAESHAGQVFTCV 206
Query: 113 ASLALMNKLD 122
+LA+ +LD
Sbjct: 207 GALAIAGRLD 216
Score = 56 (24.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 29/107 (27%), Positives = 48/107 (44%)
Query: 177 IGASLSILNAATWIDEERL--LLSVLDTQHMTGGLSKWSDTQADILHTY-LGEFFVR-PR 232
+GA L+I +D++RL LS H GGL+ + AD +++ +G +
Sbjct: 206 VGA-LAIAGRLDLVDKDRLGGWLSERQLDH--GGLNGRPEKLADACYSWWVGASLAMIGK 262
Query: 233 IIKTQIESLKRWLIFRQ---RSGFQGRPNKPVDTCYTFWIGASLSIL 276
+ L +++ Q GF RP VD +T + A LS+L
Sbjct: 263 LNWIDGSKLAAYILRCQDPEAGGFADRPGNAVDVFHTHFAIAGLSLL 309
Score = 50 (22.7 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 157 QRSGFQGRPNKPVDTCYTFWIGASLSIL 184
+ GF RP VD +T + A LS+L
Sbjct: 282 EAGGFADRPGNAVDVFHTHFAIAGLSLL 309
>FB|FBgn0028970 [details] [associations]
symbol:betaggt-II "beta subunit of type II geranylgeranyl
transferase" species:7227 "Drosophila melanogaster" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=NAS]
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=IEA]
[GO:0018344 "protein geranylgeranylation" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432 EMBL:AE014134
InterPro:IPR008930 SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0004662
GO:GO:0018344 GO:GO:0004663 GeneTree:ENSGT00530000063392 KO:K05956
OMA:ESHAGLI PANTHER:PTHR11774:SF5 EMBL:AF133269 EMBL:AY060784
RefSeq:NP_524894.1 UniGene:Dm.1765 HSSP:Q08603 SMR:Q9XZ68
IntAct:Q9XZ68 MINT:MINT-777402 STRING:Q9XZ68
EnsemblMetazoa:FBtr0077631 GeneID:47757 KEGG:dme:Dmel_CG18627
UCSC:CG18627-RA CTD:47757 FlyBase:FBgn0028970 InParanoid:Q9XZ68
OrthoDB:EOG41VHJN GenomeRNAi:47757 NextBio:839096 Uniprot:Q9XZ68
Length = 347
Score = 204 (76.9 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 62/179 (34%), Positives = 95/179 (53%)
Query: 147 ESLKRWLI-FRQRSG-FQGRPNKPVDTCYTFWIGASLSILNAATW-IDEERLLLSVLDTQ 203
E++ R+++ +Q G F G VDT ++F ASL++L ID E+ + VL
Sbjct: 129 EAVVRFVVGLQQPDGSFFGDKWGEVDTRFSFCAVASLTLLGRMEQTIDVEKAVKFVLSCC 188
Query: 204 HMT-GGL-SK-WSDTQADILHTYLGEFFVRPRIIKTQIESLKRWLIFRQ--RSGFQGRPN 258
+ T GG SK +++ A +++ +G F + R+ ++ L WL RQ G GRP
Sbjct: 189 NQTDGGFGSKPGAESHAGLIYCCVGFFSLTHRLHLLDVDKLGWWLCERQLPSGGLNGRPE 248
Query: 259 KPVDTCYTFWIGASLSILNSATWIDEERL---LLSVLDTQHMTGGLSKWSDTQADILHT 314
K D CY++W+ ASL+I+ WI E+L +LS DT+ TGG S + DI HT
Sbjct: 249 KLPDVCYSWWVLASLTIMGRLHWISSEKLQQFILSCQDTE--TGGFSDRTGNMPDIFHT 305
>GENEDB_PFALCIPARUM|PFF0120w [details] [associations]
symbol:PFF0120w "putative
geranylgeranyltransferase" species:5833 "Plasmodium falciparum"
[GO:0004661 "protein geranylgeranyltransferase activity"
evidence=ISS] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 EMBL:AL844505 GO:GO:0018344
GO:GO:0004663 HOGENOM:HOG000180334 KO:K05956 PANTHER:PTHR11774:SF5
RefSeq:XP_966015.1 ProteinModelPortal:C6KSM5
EnsemblProtists:PFF0120w:mRNA GeneID:3885742 KEGG:pfa:PFF0120w
EuPathDB:PlasmoDB:PF3D7_0602500 ProtClustDB:CLSZ2433471
Uniprot:C6KSM5
Length = 379
Score = 172 (65.6 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 61/231 (26%), Positives = 104/231 (45%)
Query: 119 NKLDTLRPTQASLYLDLVKS----FLFYSPQI-ESLKRWLI--FRQRSGFQGRPNKPVDT 171
NK+D L T + LD + + YS I E+ ++++ F + F+G VDT
Sbjct: 123 NKVD-LNNTNNNNKLDFNNTNDNNYNVYSKSIRENTCKYILTLFNEDGSFKGDMWGEVDT 181
Query: 172 CYTFWIGASLSILNAATWIDEERLLLSVLDTQHMTGGLSKW---SDTQADILHTYLGEFF 228
+ + + L+ILN + +++ +L + W ++ A + + F
Sbjct: 182 RFVYSAVSCLTILNKINLVCVDKISSYLLTNYAICENGFSWVSGNEPHAASVFCCIATLF 241
Query: 229 VRPRIIKTQIESLKRWLIFRQRS--GFQGRPNKPVDTCYTFWIGASLSILNSATWIDEER 286
+ ++ L WL RQ + GF GR K DTCY++WI ++L +L WI++
Sbjct: 242 LIQKLYLINENKLAHWLSLRQTTNGGFNGRAEKLTDTCYSWWIFSTLIVLKKYNWINKNA 301
Query: 287 LLLSVLDTQHMT-GGLSKWSDTQADILHTY--LEAMSHASRNKLKERNFQL 334
L +L Q + GG+S D DI HT+ L A+S E+ + L
Sbjct: 302 LKNYILLCQDIEKGGISDNPDCLPDICHTFFGLAALSLIDNLNESEKKYTL 352
Score = 74 (31.1 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 55 CDMRFVFCACSIC-YILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCALA 113
C + + C+C I + ++ + + FI + + DG FG +SH ST+ A+
Sbjct: 37 CGVFYFLCSCKILSHTIEK-----KEEFINFILKCQNVDGGFGNNINYDSHIVSTHHAIL 91
Query: 114 SLALMN 119
SL L+N
Sbjct: 92 SLLLLN 97
>UNIPROTKB|G4MQQ5 [details] [associations]
symbol:MGG_09304 "Type-2 protein geranylgeranyltransferase
subunit beta" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0006612 GO:GO:0006888
EMBL:CM001231 GO:GO:0018344 GO:GO:0004663 KO:K05956
PANTHER:PTHR11774:SF5 GO:GO:0005968 RefSeq:XP_003709954.1
ProteinModelPortal:G4MQQ5 EnsemblFungi:MGG_09304T0 GeneID:2680219
KEGG:mgr:MGG_09304 Uniprot:G4MQQ5
Length = 329
Score = 197 (74.4 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 65/252 (25%), Positives = 109/252 (43%)
Query: 68 YILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPT 127
++L + R +EF+ +G FG P ++H ST A+ LA+++ LD L
Sbjct: 54 HLLGQPDALPRDATIEFVLSCQHDNGGFGAAPGHDAHMLSTVSAVQILAMVDALDEL--D 111
Query: 128 QASLYLDLVKSFLFYSPQIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNAA 187
+ V F I L+ RQ F G DT + + +LS+L
Sbjct: 112 KKGKGRRQVGKF------IADLQN----RQTGTFAGDEWGEEDTRFLYGALNALSLLGLL 161
Query: 188 TWIDEERLLLSVLDTQHMTGGLSK--WSDTQADILHTYLGEFFVRPRIIKTQIESLKRWL 245
+D + + ++ + GG +++ + + T + + R+ + L RWL
Sbjct: 162 EMVDVGKAVDHIVACANFDGGYGNRPGAESHSGQIFTCVAALSIAGRLDLVDTDKLGRWL 221
Query: 246 IFRQRSG--FQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVLDTQHMT-GGLS 302
RQ +G GRP K D CY++W+ +SL + WID ++L +L Q GG+S
Sbjct: 222 SERQIAGGGLNGRPEKQEDVCYSWWVLSSLETIGRTHWIDRDQLAAFILKCQDTEKGGMS 281
Query: 303 KWSDTQADILHT 314
Q D+ HT
Sbjct: 282 DRPGNQVDVFHT 293
Score = 148 (57.2 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 31/82 (37%), Positives = 43/82 (52%)
Query: 147 ESLKRWLIFRQRSG--FQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQH 204
+ L RWL RQ +G GRP K D CY++W+ +SL + WID ++L +L Q
Sbjct: 215 DKLGRWLSERQIAGGGLNGRPEKQEDVCYSWWVLSSLETIGRTHWIDRDQLAAFILKCQD 274
Query: 205 MT-GGLSKWSDTQADILHTYLG 225
GG+S Q D+ HT G
Sbjct: 275 TEKGGMSDRPGNQVDVFHTCFG 296
Score = 99 (39.9 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 20/70 (28%), Positives = 38/70 (54%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCAL 112
G+ D RF++ A + +L +D + ++ I ++DG +G P ESH G + +
Sbjct: 141 GEEDTRFLYGALNALSLLGLLEMVDVGKAVDHIVACANFDGGYGNRPGAESHSGQIFTCV 200
Query: 113 ASLALMNKLD 122
A+L++ +LD
Sbjct: 201 AALSIAGRLD 210
>SGD|S000003123 [details] [associations]
symbol:CDC43 "Beta subunit of geranylgeranyltransferase type
I" species:4932 "Saccharomyces cerevisiae" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=IEA;IDA]
[GO:0005622 "intracellular" evidence=TAS] [GO:0005953 "CAAX-protein
geranylgeranyltransferase complex" evidence=IDA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=TAS] [GO:0004661
"protein geranylgeranyltransferase activity" evidence=IDA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004659
"prenyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0030010 "establishment of cell polarity"
evidence=TAS] [GO:0018344 "protein geranylgeranylation"
evidence=IDA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=TAS] InterPro:IPR001330 Pfam:PF00432 SGD:S000003123
GO:GO:0007264 EMBL:BK006941 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 GO:GO:0006874 GO:GO:0030010 EMBL:Z48618
eggNOG:COG5029 GO:GO:0005953 GO:GO:0004662 GO:GO:0018344
HOGENOM:HOG000180333 KO:K11713 OrthoDB:EOG4WQ4BS EMBL:M31114
EMBL:M74109 EMBL:Z72677 PIR:A40875 RefSeq:NP_011360.1
ProteinModelPortal:P18898 SMR:P18898 DIP:DIP-1232N IntAct:P18898
MINT:MINT-396220 STRING:P18898 PaxDb:P18898 PeptideAtlas:P18898
EnsemblFungi:YGL155W GeneID:852722 KEGG:sce:YGL155W CYGD:YGL155w
OMA:TCYSWWC NextBio:972105 Genevestigator:P18898 GermOnline:YGL155W
Uniprot:P18898
Length = 376
Score = 200 (75.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 71/206 (34%), Positives = 104/206 (50%)
Query: 38 SFTTPCFSFK--C-TLADGDCDMRFVFCACSICYIL-----DDWSG-MDRARCLEFIFRS 88
SF + C +K C + D D D+RF + A +I YI +D+ +D + L +I
Sbjct: 145 SFVS-CLDYKTNCGSSVDSD-DLRFCYIAVAILYICGCRSKEDFDEYIDTEKLLGYIMSQ 202
Query: 89 LSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPT--QASLYLDLVKSFLFYS-PQ 145
Y+GAFG E H G T CAL++LAL++ L+ L + ++ L + + +
Sbjct: 203 QCYNGAFGAHN--EPHSGYTSCALSTLALLSSLEKLSDKFKEDTITWLLHRQVSSHGCMK 260
Query: 146 IES-LKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNAATW--IDEERLLLS-VLD 201
ES L GFQGR NK DTCY FW SL +L W + + L+ + +LD
Sbjct: 261 FESELNASYDQSDDGGFQGRENKFADTCYAFWCLNSLHLLTK-DWKMLCQTELVTNYLLD 319
Query: 202 -TQH-MTGGLSKWSDTQADILHTYLG 225
TQ +TGG SK + AD+ H+ LG
Sbjct: 320 RTQKTLTGGFSKNDEEDADLYHSCLG 345
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 31/70 (44%), Positives = 41/70 (58%)
Query: 252 GFQGRPNKPVDTCYTFWIGASLSILNSATW--IDEERLLLS-VLD-TQH-MTGGLSKWSD 306
GFQGR NK DTCY FW SL +L W + + L+ + +LD TQ +TGG SK +
Sbjct: 276 GFQGRENKFADTCYAFWCLNSLHLLTK-DWKMLCQTELVTNYLLDRTQKTLTGGFSKNDE 334
Query: 307 TQADILHTYL 316
AD+ H+ L
Sbjct: 335 EDADLYHSCL 344
>UNIPROTKB|F1P4E5 [details] [associations]
symbol:RABGGTB "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004663 "Rab geranylgeranyltransferase
activity" evidence=IEA] [GO:0018344 "protein geranylgeranylation"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00530000063392 OMA:ESHAGLI PANTHER:PTHR11774:SF5
EMBL:AADN02012381 IPI:IPI00594865 Ensembl:ENSGALT00000018575
Uniprot:F1P4E5
Length = 343
Score = 185 (70.2 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 53/191 (27%), Positives = 87/191 (45%)
Query: 156 RQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQHMTGGLS--KWS 213
++ F G +DT ++F A+L++L ID + + VL + GG S
Sbjct: 140 KEDGSFAGDKWGEIDTRFSFCAAATLALLGKLDAIDVGKAVEFVLSCMNFDGGFGCRPGS 199
Query: 214 DTQADILHTYLGEFFVRPRIIKTQIESLKRWLIFRQ--RSGFQGRPNKPVDTCYTFWIGA 271
++ A ++ G + ++ + ++ L WL RQ G GRP K D CY++W+ A
Sbjct: 200 ESHAGQIYCCTGFLAITDQLHQINVDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLA 259
Query: 272 SLSILNSATWIDEERLLLSVLDTQ-HMTGGLSKWSDTQADILHTY--LEAMSHASRNKLK 328
SL ++ WID E+L +L Q TGG + D HT + +S ++K
Sbjct: 260 SLKMIGRLHWIDREKLRCFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIK 319
Query: 329 ERN--FQLPLD 337
N F +P D
Sbjct: 320 AVNPVFCMPED 330
Score = 135 (52.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCAL 112
G+ D RF FCA + +L +D + +EF+ +++DG FG P ESH G YC
Sbjct: 151 GEIDTRFSFCAAATLALLGKLDAIDVGKAVEFVLSCMNFDGGFGCRPGSESHAGQIYCCT 210
Query: 113 ASLALMNKL 121
LA+ ++L
Sbjct: 211 GFLAITDQL 219
>UNIPROTKB|F1LSM6 [details] [associations]
symbol:Rabggtb "Geranylgeranyl transferase type-2 subunit
beta" species:10116 "Rattus norvegicus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 RGD:3530 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00530000063392 PANTHER:PTHR11774:SF5 IPI:IPI00421632
PRIDE:F1LSM6 Ensembl:ENSRNOT00000065997 ArrayExpress:F1LSM6
Uniprot:F1LSM6
Length = 331
Score = 184 (69.8 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 56/207 (27%), Positives = 94/207 (45%)
Query: 156 RQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQHMTGGLS--KWS 213
++ F G +DT ++F A+L++L I+ E+ + VL + GG S
Sbjct: 128 KEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGS 187
Query: 214 DTQADILHTYLGEFFVRPRIIKTQIESLKRWLIFRQ--RSGFQGRPNKPVDTCYTFWIGA 271
++ A ++ G + ++ + + L WL RQ G GRP K D CY++W+ A
Sbjct: 188 ESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLA 247
Query: 272 SLSILNSATWIDEERLLLSVLDTQ-HMTGGLSKWSDTQADILHTYLEAMSHASRNKLKER 330
SL I+ WID E+L +L Q TGG ++D D++ + A + L E
Sbjct: 248 SLKIIGRLHWIDREKLRSFILACQDEETGG---FADRPGDMVDPFHTLFGIAGLSLLGEE 304
Query: 331 NFQLPLDKKDIAPLDELERIDTNMAFV 357
+ P+ P D L+R++ V
Sbjct: 305 QIK-PVSPVFCMPEDVLQRVNVQPELV 330
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCAL 112
G+ D RF FCA + +L ++ + +EF+ +++DG FG P ESH G YC
Sbjct: 139 GEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCT 198
Query: 113 ASLALMNKL 121
LA+ ++L
Sbjct: 199 GFLAITSQL 207
>UNIPROTKB|F1M052 [details] [associations]
symbol:Rabggtb "Geranylgeranyl transferase type-2 subunit
beta" species:10116 "Rattus norvegicus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 RGD:3530 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663 OMA:ESHAGLI
PANTHER:PTHR11774:SF5 IPI:IPI00951311 Ensembl:ENSRNOT00000013660
ArrayExpress:F1M052 Uniprot:F1M052
Length = 337
Score = 184 (69.8 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 56/207 (27%), Positives = 94/207 (45%)
Query: 156 RQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQHMTGGLS--KWS 213
++ F G +DT ++F A+L++L I+ E+ + VL + GG S
Sbjct: 134 KEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGS 193
Query: 214 DTQADILHTYLGEFFVRPRIIKTQIESLKRWLIFRQ--RSGFQGRPNKPVDTCYTFWIGA 271
++ A ++ G + ++ + + L WL RQ G GRP K D CY++W+ A
Sbjct: 194 ESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLA 253
Query: 272 SLSILNSATWIDEERLLLSVLDTQ-HMTGGLSKWSDTQADILHTYLEAMSHASRNKLKER 330
SL I+ WID E+L +L Q TGG ++D D++ + A + L E
Sbjct: 254 SLKIIGRLHWIDREKLRSFILACQDEETGG---FADRPGDMVDPFHTLFGIAGLSLLGEE 310
Query: 331 NFQLPLDKKDIAPLDELERIDTNMAFV 357
+ P+ P D L+R++ V
Sbjct: 311 QIK-PVSPVFCMPEDVLQRVNVQPELV 336
Score = 129 (50.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCAL 112
G+ D RF FCA + +L ++ + +EF+ +++DG FG P ESH G YC
Sbjct: 145 GEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCT 204
Query: 113 ASLALMNKL 121
LA+ ++L
Sbjct: 205 GFLAITSQL 213
>TAIR|locus:2088614 [details] [associations]
symbol:RGTB2 "RAB geranylgeranyl transferase beta subunit
2" species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432 GO:GO:0005829
EMBL:CP002686 InterPro:IPR008930 SUPFAM:SSF48239 EMBL:AP002040
EMBL:AC069473 EMBL:AP002063 GO:GO:0018344 GO:GO:0004663 KO:K05956
PANTHER:PTHR11774:SF5 OMA:ERQDYES HSSP:Q08603 ProtClustDB:PLN03201
EMBL:BT028896 IPI:IPI00545274 RefSeq:NP_187814.1 RefSeq:NP_850567.1
UniGene:At.39649 ProteinModelPortal:Q9LHL5 SMR:Q9LHL5
EnsemblPlants:AT3G12070.1 EnsemblPlants:AT3G12070.2 GeneID:820381
KEGG:ath:AT3G12070 TAIR:At3g12070 InParanoid:Q9LHL5
PhylomeDB:Q9LHL5 Genevestigator:Q9LHL5 Uniprot:Q9LHL5
Length = 317
Score = 182 (69.1 bits), Expect = 7.8e-12, P = 7.8e-12
Identities = 67/277 (24%), Positives = 118/277 (42%)
Query: 45 SFKCTLADGDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESH 104
SF+ + D M + + +LD + + ++ G F + H
Sbjct: 25 SFESVVMD-HLRMNGAYWGLTTLALLDKLGSVSEDEVVSWVMTCQHESGGFAGNTGHDPH 83
Query: 105 GGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFYSPQIESLKRWLIFRQRSGFQGR 164
T A+ LAL +KL+ L + S Y I L+ + F G
Sbjct: 84 VLYTLSAVQILALFDKLNILDVEKVSNY-------------IAGLQN-----EDGSFSGD 125
Query: 165 PNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQHMTGGL--SKWSDTQADILHT 222
VDT +++ LSIL I+ ++ + ++ +++ GG S +++ A +
Sbjct: 126 IWGEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLDGGFGCSPGAESHAGQIFC 185
Query: 223 YLGEFFVRPRIIKTQIESLKRWLIFRQ---RSGFQGRPNKPVDTCYTFWIGASLSILNSA 279
+G + + + + L WL RQ G GRP K D CY++W+ +SL +++
Sbjct: 186 CVGALAITGNLHRVDKDLLGWWLCERQDYESGGLNGRPEKLPDVCYSWWVLSSLIMIDRV 245
Query: 280 TWIDEERLLLSVLDTQHM-TGGLSKWSDTQADILHTY 315
WI++ +L+ +LD+Q M GG+S DI HTY
Sbjct: 246 HWIEKAKLVKFILDSQDMDNGGISDRPSYTVDIFHTY 282
Score = 153 (58.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 152 WLIFRQ---RSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQHM-TG 207
WL RQ G GRP K D CY++W+ +SL +++ WI++ +L+ +LD+Q M G
Sbjct: 207 WLCERQDYESGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWIEKAKLVKFILDSQDMDNG 266
Query: 208 GLSKWSDTQADILHTYLG 225
G+S DI HTY G
Sbjct: 267 GISDRPSYTVDIFHTYFG 284
>UNIPROTKB|P53611 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9606 "Homo sapiens" [GO:0018344 "protein
geranylgeranylation" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] [GO:0006464 "cellular protein modification process"
evidence=NAS] [GO:0007601 "visual perception" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 GO:GO:0007601 GO:GO:0006464
Pathway_Interaction_DB:prlsignalingeventspathway eggNOG:COG5029
GO:GO:0018344 GO:GO:0004663 HOGENOM:HOG000180334 KO:K05956
OMA:ESHAGLI PANTHER:PTHR11774:SF5 CTD:5876 HOVERGEN:HBG008182
OrthoDB:EOG4V6ZGV EMBL:U49245 EMBL:X98001 EMBL:Y08201 EMBL:BC020790
IPI:IPI00295849 PIR:G02431 RefSeq:NP_004573.2 UniGene:Hs.78948
ProteinModelPortal:P53611 SMR:P53611 IntAct:P53611 MINT:MINT-260716
STRING:P53611 PhosphoSite:P53611 DMDM:2506788 PaxDb:P53611
PRIDE:P53611 Ensembl:ENST00000319942 GeneID:5876 KEGG:hsa:5876
UCSC:uc001dgy.1 GeneCards:GC01P076251 HGNC:HGNC:9796 HPA:HPA026585
HPA:HPA027167 MIM:179080 neXtProt:NX_P53611 PharmGKB:PA34157
InParanoid:P53611 PhylomeDB:P53611 BRENDA:2.5.1.60 BindingDB:P53611
ChEMBL:CHEMBL2338 ChiTaRS:RABGGTB GenomeRNAi:5876 NextBio:22832
ArrayExpress:P53611 Bgee:P53611 CleanEx:HS_RABGGTB
Genevestigator:P53611 Uniprot:P53611
Length = 331
Score = 180 (68.4 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 55/207 (26%), Positives = 95/207 (45%)
Query: 156 RQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQHMTGGLS--KWS 213
++ F G +DT ++F A+L++L I+ E+ + VL + GG S
Sbjct: 128 KEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGS 187
Query: 214 DTQADILHTYLGEFFVRPRIIKTQIESLKRWLIFRQ--RSGFQGRPNKPVDTCYTFWIGA 271
++ A ++ G + ++ + + L WL RQ G GRP K D CY++W+ A
Sbjct: 188 ESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLA 247
Query: 272 SLSILNSATWIDEERLLLSVLDTQ-HMTGGLSKWSDTQADILHTYLEAMSHASRNKLKER 330
SL I+ WID E+L +L Q TGG ++D D++ + A + L E
Sbjct: 248 SLKIIGRLHWIDREKLRNFILACQDEETGG---FADRPGDMVDPFHTLFGIAGLSLLGEE 304
Query: 331 NFQLPLDKKDIAPLDELERIDTNMAFV 357
+ P++ P + L+R++ V
Sbjct: 305 QIK-PVNPVFCMPEEVLQRVNVQPELV 330
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCAL 112
G+ D RF FCA + +L ++ + +EF+ +++DG FG P ESH G YC
Sbjct: 139 GEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCT 198
Query: 113 ASLALMNKL 121
LA+ ++L
Sbjct: 199 GFLAITSQL 207
>RGD|3530 [details] [associations]
symbol:Rabggtb "Rab geranylgeranyltransferase, beta subunit"
species:10116 "Rattus norvegicus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IDA] [GO:0018344
"protein geranylgeranylation" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001330 InterPro:IPR026873
Pfam:PF00432 RGD:3530 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663 KO:K05956
PANTHER:PTHR11774:SF5 PDB:1DCE PDB:1LTX PDB:3C72 PDB:3DSS PDB:3DST
PDB:3DSU PDB:3DSV PDB:3DSW PDB:3DSX PDB:3HXB PDB:3HXC PDB:3HXD
PDB:3HXE PDB:3HXF PDB:4EHM PDB:4GTS PDB:4GTT PDB:4GTV PDBsum:1DCE
PDBsum:1LTX PDBsum:3C72 PDBsum:3DSS PDBsum:3DST PDBsum:3DSU
PDBsum:3DSV PDBsum:3DSW PDBsum:3DSX PDBsum:3HXB PDBsum:3HXC
PDBsum:3HXD PDBsum:3HXE PDBsum:3HXF PDBsum:4EHM PDBsum:4GTS
PDBsum:4GTT PDBsum:4GTV CTD:5876 HOVERGEN:HBG008182 EMBL:L10416
EMBL:S62097 IPI:IPI00421632 PIR:B45977 RefSeq:NP_619715.1
UniGene:Rn.107818 ProteinModelPortal:Q08603 SMR:Q08603 DIP:DIP-6138N
STRING:Q08603 PRIDE:Q08603 GeneID:25533 KEGG:rno:25533
InParanoid:Q08603 EvolutionaryTrace:Q08603 NextBio:607037
ArrayExpress:Q08603 Genevestigator:Q08603
GermOnline:ENSRNOG00000009992 Uniprot:Q08603
Length = 331
Score = 180 (68.4 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 55/207 (26%), Positives = 94/207 (45%)
Query: 156 RQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQHMTGGLS--KWS 213
++ F G +DT ++F A+L++L I+ E+ + VL + GG S
Sbjct: 128 KEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGS 187
Query: 214 DTQADILHTYLGEFFVRPRIIKTQIESLKRWLIFRQ--RSGFQGRPNKPVDTCYTFWIGA 271
++ A ++ G + ++ + + L WL RQ G GRP K D CY++W+ A
Sbjct: 188 ESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLA 247
Query: 272 SLSILNSATWIDEERLLLSVLDTQ-HMTGGLSKWSDTQADILHTYLEAMSHASRNKLKER 330
SL I+ WID E+L +L Q TGG ++D D++ + A + L E
Sbjct: 248 SLKIIGRLHWIDREKLRSFILACQDEETGG---FADRPGDMVDPFHTLFGIAGLSLLGEE 304
Query: 331 NFQLPLDKKDIAPLDELERIDTNMAFV 357
+ P+ P + L+R++ V
Sbjct: 305 QIK-PVSPVFCMPEEVLQRVNVQPELV 330
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCAL 112
G+ D RF FCA + +L ++ + +EF+ +++DG FG P ESH G YC
Sbjct: 139 GEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCT 198
Query: 113 ASLALMNKL 121
LA+ ++L
Sbjct: 199 GFLAITSQL 207
>MGI|MGI:99537 [details] [associations]
symbol:Rabggtb "RAB geranylgeranyl transferase, b subunit"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018344 "protein geranylgeranylation" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 MGI:MGI:99537 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 EMBL:CH466532 eggNOG:COG5029
GO:GO:0018344 GO:GO:0004663 GeneTree:ENSGT00530000063392
HOGENOM:HOG000180334 KO:K05956 OMA:ESHAGLI PANTHER:PTHR11774:SF5
PDB:3PZ1 PDB:3PZ2 PDB:3PZ3 PDBsum:3PZ1 PDBsum:3PZ2 PDBsum:3PZ3
CTD:5876 HOVERGEN:HBG008182 OrthoDB:EOG4V6ZGV EMBL:U12922
EMBL:BC132473 EMBL:BC138547 IPI:IPI00133505 PIR:I49116 PIR:JC6177
RefSeq:NP_035361.2 UniGene:Mm.277831 ProteinModelPortal:P53612
SMR:P53612 STRING:P53612 PhosphoSite:P53612 PaxDb:P53612
PRIDE:P53612 Ensembl:ENSMUST00000167111 GeneID:19352 KEGG:mmu:19352
InParanoid:A2RTE6 EvolutionaryTrace:P53612 NextBio:296383
Bgee:P53612 CleanEx:MM_RABGGTB Genevestigator:P53612
GermOnline:ENSMUSG00000038975 Uniprot:P53612
Length = 339
Score = 180 (68.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 55/207 (26%), Positives = 94/207 (45%)
Query: 156 RQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQHMTGGLS--KWS 213
++ F G +DT ++F A+L++L I+ E+ + VL + GG S
Sbjct: 136 KEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGS 195
Query: 214 DTQADILHTYLGEFFVRPRIIKTQIESLKRWLIFRQ--RSGFQGRPNKPVDTCYTFWIGA 271
++ A ++ G + ++ + + L WL RQ G GRP K D CY++W+ A
Sbjct: 196 ESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLA 255
Query: 272 SLSILNSATWIDEERLLLSVLDTQ-HMTGGLSKWSDTQADILHTYLEAMSHASRNKLKER 330
SL I+ WID E+L +L Q TGG ++D D++ + A + L E
Sbjct: 256 SLKIIGRLHWIDREKLRSFILACQDEETGG---FADRPGDMVDPFHTLFGIAGLSLLGEE 312
Query: 331 NFQLPLDKKDIAPLDELERIDTNMAFV 357
+ P+ P + L+R++ V
Sbjct: 313 QIK-PVSPVFCMPEEVLQRVNVQPELV 338
Score = 129 (50.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCAL 112
G+ D RF FCA + +L ++ + +EF+ +++DG FG P ESH G YC
Sbjct: 147 GEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCT 206
Query: 113 ASLALMNKL 121
LA+ ++L
Sbjct: 207 GFLAITSQL 215
>UNIPROTKB|G8JKY6 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9913 "Bos taurus" [GO:0018344 "protein
geranylgeranylation" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00530000063392 OMA:ESHAGLI PANTHER:PTHR11774:SF5
EMBL:DAAA02008284 Ensembl:ENSBTAT00000024551 Uniprot:G8JKY6
Length = 331
Score = 178 (67.7 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 55/207 (26%), Positives = 93/207 (44%)
Query: 156 RQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQHMTGGLS--KWS 213
++ F G +DT ++F A+L++L I+ E+ + VL + GG S
Sbjct: 128 KEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGS 187
Query: 214 DTQADILHTYLGEFFVRPRIIKTQIESLKRWLIFRQ--RSGFQGRPNKPVDTCYTFWIGA 271
++ A ++ G + ++ + + L WL RQ G GRP K D CY++W+ A
Sbjct: 188 ESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLA 247
Query: 272 SLSILNSATWIDEERLLLSVLDTQ-HMTGGLSKWSDTQADILHTYLEAMSHASRNKLKER 330
SL I+ WID E+L +L Q TGG ++D D++ + A + L E
Sbjct: 248 SLKIIGRLHWIDREKLRSFILACQDEETGG---FADRPGDMVDPFHTLFGIAGLSLLGEE 304
Query: 331 NFQLPLDKKDIAPLDELERIDTNMAFV 357
+ P+ P + L R++ V
Sbjct: 305 QIK-PVSPVFCMPEEVLRRVNVQPELV 330
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCAL 112
G+ D RF FCA + +L ++ + +EF+ +++DG FG P ESH G YC
Sbjct: 139 GEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCT 198
Query: 113 ASLALMNKL 121
LA+ ++L
Sbjct: 199 GFLAITSQL 207
>UNIPROTKB|Q5E9B3 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9913 "Bos taurus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663
HOGENOM:HOG000180334 KO:K05956 PANTHER:PTHR11774:SF5 EMBL:BT021007
EMBL:BC147953 IPI:IPI00705500 RefSeq:NP_001015646.1
UniGene:Bt.20263 ProteinModelPortal:Q5E9B3 SMR:Q5E9B3 STRING:Q5E9B3
PRIDE:Q5E9B3 GeneID:533276 KEGG:bta:533276 CTD:5876
HOVERGEN:HBG008182 InParanoid:Q5E9B3 OrthoDB:EOG4V6ZGV
NextBio:20875982 Uniprot:Q5E9B3
Length = 331
Score = 178 (67.7 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 55/207 (26%), Positives = 93/207 (44%)
Query: 156 RQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQHMTGGLS--KWS 213
++ F G +DT ++F A+L++L I+ E+ + VL + GG S
Sbjct: 128 KEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGS 187
Query: 214 DTQADILHTYLGEFFVRPRIIKTQIESLKRWLIFRQ--RSGFQGRPNKPVDTCYTFWIGA 271
++ A ++ G + ++ + + L WL RQ G GRP K D CY++W+ A
Sbjct: 188 ESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLA 247
Query: 272 SLSILNSATWIDEERLLLSVLDTQ-HMTGGLSKWSDTQADILHTYLEAMSHASRNKLKER 330
SL I+ WID E+L +L Q TGG ++D D++ + A + L E
Sbjct: 248 SLKIIGRLHWIDREKLRSFILACQDEETGG---FADRPGDMVDPFHTLFGIAGLSLLGEE 304
Query: 331 NFQLPLDKKDIAPLDELERIDTNMAFV 357
+ P+ P + L R++ V
Sbjct: 305 QIK-PVSPVFCMPEEVLRRVNVQPELV 330
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCAL 112
G+ D RF FCA + +L ++ + +EF+ +++DG FG P ESH G YC
Sbjct: 139 GEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCT 198
Query: 113 ASLALMNKL 121
LA+ ++L
Sbjct: 199 GFLAITSQL 207
>UNIPROTKB|F1P6X0 [details] [associations]
symbol:RABGGTB "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0018344 "protein geranylgeranylation"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00530000063392 OMA:ESHAGLI PANTHER:PTHR11774:SF5
EMBL:AAEX03004896 Ensembl:ENSCAFT00000032473 Uniprot:F1P6X0
Length = 331
Score = 178 (67.7 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 55/207 (26%), Positives = 93/207 (44%)
Query: 156 RQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQHMTGGLS--KWS 213
++ F G +DT ++F A+L++L I+ E+ + VL + GG S
Sbjct: 128 KEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGS 187
Query: 214 DTQADILHTYLGEFFVRPRIIKTQIESLKRWLIFRQ--RSGFQGRPNKPVDTCYTFWIGA 271
++ A ++ G + ++ + + L WL RQ G GRP K D CY++W+ A
Sbjct: 188 ESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLA 247
Query: 272 SLSILNSATWIDEERLLLSVLDTQ-HMTGGLSKWSDTQADILHTYLEAMSHASRNKLKER 330
SL I+ WID E+L +L Q TGG ++D D++ + A + L E
Sbjct: 248 SLKIIGRLHWIDREKLRSFILACQDEETGG---FADRPGDMVDPFHTLFGIAGLSLLGEE 304
Query: 331 NFQLPLDKKDIAPLDELERIDTNMAFV 357
+ P+ P + L R++ V
Sbjct: 305 QIK-PVSPVFCMPEEVLRRVNVQPELV 330
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCAL 112
G+ D RF FCA + +L ++ + +EF+ +++DG FG P ESH G YC
Sbjct: 139 GEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCT 198
Query: 113 ASLALMNKL 121
LA+ ++L
Sbjct: 199 GFLAITSQL 207
>ZFIN|ZDB-GENE-040426-2116 [details] [associations]
symbol:rabggtb "Rab geranylgeranyltransferase,
beta subunit" species:7955 "Danio rerio" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016740 "transferase activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
ZFIN:ZDB-GENE-040426-2116 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0018344 GO:GO:0004663 GeneTree:ENSGT00530000063392
HOGENOM:HOG000180334 KO:K05956 OMA:ESHAGLI PANTHER:PTHR11774:SF5
CTD:5876 HOVERGEN:HBG008182 OrthoDB:EOG4V6ZGV EMBL:CT027702
EMBL:BC097066 IPI:IPI00613192 RefSeq:NP_998277.2 UniGene:Dr.79075
SMR:Q4V946 STRING:Q4V946 Ensembl:ENSDART00000099248 GeneID:406386
KEGG:dre:406386 InParanoid:Q4V946 NextBio:20817996 Uniprot:Q4V946
Length = 331
Score = 176 (67.0 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 71/300 (23%), Positives = 127/300 (42%)
Query: 57 MRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCALASLA 116
M ++ ++ ++ S M+R +EFI +S +D G + H L+++
Sbjct: 47 MSGIYWGLTVMDLMGQLSRMNREEIIEFI-KSCQHDCG-GISASI-GHDPHLLYTLSAIQ 103
Query: 117 LMNKLDTLRPTQASLYLDLVKSFLFYSPQIESLKRWLIFRQRSG-FQGRPNKPVDTCYTF 175
+++ D++ ++ VK +Q G F G +DT ++F
Sbjct: 104 ILSLYDSVNAIDVDKVVEYVKGL----------------QQEDGSFAGDKWGEIDTRFSF 147
Query: 176 WIGASLSILNAATWIDEERLLLSVLDTQHMTGGLS--KWSDTQADILHTYLGEFFVRPRI 233
A+L++L I+ ++ + V+ + GG S++ A ++ G V ++
Sbjct: 148 CAVATLALLGKLDVINVDKAVEFVMSCMNFDGGFGCRPGSESHAGQIYCCTGFLSVTGQL 207
Query: 234 IKTQIESLKRWLIFRQ--RSGFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSV 291
+ + L WL RQ G GRP K D CY++W+ ASL I+ WID+ +L +
Sbjct: 208 HQVNADLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRIHWIDKAKLRNFI 267
Query: 292 LDTQ-HMTGGLSKWSDTQADILHTYLEAMSHASRNKLKERNFQLPLDKKDIAPLDELERI 350
L Q TGG + D HT A + L + + P++ P D L+RI
Sbjct: 268 LACQDEETGGFADRPGDMVDPFHTLFGV---AGLSLLGDEQIK-PVNPVFCMPEDVLQRI 323
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCAL 112
G+ D RF FCA + +L ++ + +EF+ +++DG FG P ESH G YC
Sbjct: 139 GEIDTRFSFCAVATLALLGKLDVINVDKAVEFVMSCMNFDGGFGCRPGSESHAGQIYCCT 198
Query: 113 ASLALMNKL 121
L++ +L
Sbjct: 199 GFLSVTGQL 207
>WB|WBGene00015099 [details] [associations]
symbol:ggtb-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
GO:GO:0009792 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872
GO:GO:0008219 GO:GO:0000003 eggNOG:COG5029 EMBL:FO080148
GO:GO:0018344 GO:GO:0004663 RefSeq:NP_498559.1 RefSeq:NP_741214.2
UniGene:Cel.10970 ProteinModelPortal:P41992 SMR:P41992
STRING:P41992 PaxDb:P41992 PRIDE:P41992 EnsemblMetazoa:B0280.1a
GeneID:175998 KEGG:cel:CELE_B0280.1 UCSC:B0280.1a CTD:175998
WormBase:B0280.1a WormBase:B0280.1b GeneTree:ENSGT00530000063392
HOGENOM:HOG000180334 InParanoid:P41992 KO:K05956 OMA:ESHAGLI
NextBio:890666 PANTHER:PTHR11774:SF5 Uniprot:P41992
Length = 335
Score = 168 (64.2 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 57/244 (23%), Positives = 107/244 (43%)
Query: 76 MDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDL 135
M + ++ + DG +G P +SH T CA+ +L + N ++ +A D
Sbjct: 72 MSTEEIVNYVLGCRNTDGGYGPAPGHDSHLLHTLCAVQTLIIFNSIE-----KADA--DT 124
Query: 136 VKSFLFYSPQIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERL 195
+ + ++ L++ + F G + VDT +T A+ +L + ++ +
Sbjct: 125 ISEY------VKGLQQ-----EDGSFCGDLSGEVDTRFTLCSLATCHLLGRLSTLNIDSA 173
Query: 196 LLSVLDTQHMTGGLSK--WSDTQADILHTYLGEFFVRPRIIKTQIESLKRWLIFRQ--RS 251
+ ++ + GG S++ + ++ +G + R+ + + WL FRQ
Sbjct: 174 VRFLMRCYNTDGGFGTRPGSESHSGQIYCCVGALAIAGRLDEIDRDRTAEWLAFRQCDSG 233
Query: 252 GFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVLDTQH-MTGGLSKWSDTQAD 310
G GRP K D CY++W+ ASL+IL +ID + + + Q TGG + AD
Sbjct: 234 GLNGRPEKLPDVCYSWWVLASLAILGRLNFIDSDAMKKFIYACQDDETGGFADRPGDCAD 293
Query: 311 ILHT 314
HT
Sbjct: 294 PFHT 297
Score = 142 (55.0 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 45 SFKCTLADGDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESH 104
SF C G+ D RF C+ + C++L S ++ + F+ R + DG FG P ESH
Sbjct: 138 SF-CGDLSGEVDTRFTLCSLATCHLLGRLSTLNIDSAVRFLMRCYNTDGGFGTRPGSESH 196
Query: 105 GGSTYCALASLALMNKLDTL 124
G YC + +LA+ +LD +
Sbjct: 197 SGQIYCCVGALAIAGRLDEI 216
>POMBASE|SPAC167.02 [details] [associations]
symbol:ptb1 "geranylgeranyltransferase II beta subunit
Ptb1" species:4896 "Schizosaccharomyces pombe" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=ISO] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=ISO] [GO:0006612 "protein targeting to membrane"
evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IMP] [GO:0018344 "protein geranylgeranylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070317 "negative regulation of G0 to G1 transition"
evidence=IMP] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
PomBase:SPAC167.02 GO:GO:0005829 GO:GO:0005634 EMBL:CU329670
GO:GO:0070317 GenomeReviews:CU329670_GR InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0006612 GO:GO:0006888
GO:GO:0006995 eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663
HOGENOM:HOG000180334 KO:K05956 OMA:ESHAGLI PANTHER:PTHR11774:SF5
GO:GO:0005968 EMBL:X92183 PIR:S65091 RefSeq:NP_593383.1
ProteinModelPortal:P46960 STRING:P46960 EnsemblFungi:SPAC167.02.1
GeneID:2543284 KEGG:spo:SPAC167.02 OrthoDB:EOG43V34B
NextBio:20804303 Uniprot:P46960
Length = 311
Score = 166 (63.5 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 69/298 (23%), Positives = 131/298 (43%)
Query: 60 VFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMN 119
++ +C ++L +D+ R + F+ L+ G F P + H +T A+ LA+++
Sbjct: 36 IYWSCMSFWLLKKKDQIDKERIVSFLLSCLTESGGFACYPGHDDHITNTVYAVQVLAMLD 95
Query: 120 KLDTLRPTQASLYLDLVKSFLFYSPQIESLK--RWLIFRQRSGFQGRPNKPVDTCYTFWI 177
L + + + Y+ +++ + S+K RW R + G C +
Sbjct: 96 SLHVVDKDKVASYIIGLQN------EDGSMKGDRWGEIDARFLYSGI------NCLAI-L 142
Query: 178 GASLSILNAATWIDEERLLLSVLDTQHMTGG--LSKWSDTQADILHTYLGEFFVRPRIIK 235
G L LN T +D ++ + GG L +++ ++ T + + ++
Sbjct: 143 G-KLDYLNKNTAVDW------LMKCYNFDGGFGLCPGAESHGAMVFTCVAALKILNKLDL 195
Query: 236 TQIESLKRWLIFRQ--RSGFQGRPNKPVDTCYTFWIGASLSILNSATWIDEERLLLSVLD 293
E L W+ RQ G GRP K D+CY +W + L+I+ WID +L+ +L
Sbjct: 196 IDEELLGWWISERQVKGGGLNGRPEKLPDSCYGWWDLSPLAIIGKLDWIDRNQLIDFLLG 255
Query: 294 TQHM-TGGLSKWSDTQADILHTYLEAMSHASRNKLKERNFQLPLDKKDIAPLDELERI 350
TQ +GG + + D+ HT S A + L+ N + P+D + PL+ +++
Sbjct: 256 TQDADSGGFADRKEDATDVYHT---CFSLAGLSLLQFPNIE-PVDPRFCLPLEVTQKM 309
Score = 116 (45.9 bits), Expect = 0.00032, P = 0.00032
Identities = 21/72 (29%), Positives = 41/72 (56%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCAL 112
G+ D RF++ + IL +++ ++++ + ++DG FG P ESHG + +
Sbjct: 125 GEIDARFLYSGINCLAILGKLDYLNKNTAVDWLMKCYNFDGGFGLCPGAESHGAMVFTCV 184
Query: 113 ASLALMNKLDTL 124
A+L ++NKLD +
Sbjct: 185 AALKILNKLDLI 196
>CGD|CAL0001670 [details] [associations]
symbol:RAM1 species:5476 "Candida albicans" [GO:0018342
"protein prenylation" evidence=NAS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0010958
"regulation of amino acid import" evidence=IEA] [GO:0006995
"cellular response to nitrogen starvation" evidence=IEA]
[GO:0018343 "protein farnesylation" evidence=IEA] [GO:0004660
"protein farnesyltransferase activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 CGD:CAL0001670
GO:GO:0003824 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042127
GO:GO:0018343 eggNOG:COG5029 GO:GO:0005965 GO:GO:0018342
PANTHER:PTHR11774:SF6 EMBL:AACQ01000259 RefSeq:XP_710548.1
ProteinModelPortal:Q59LD0 STRING:Q59LD0 GeneID:3647859
KEGG:cal:CaO19.5046 Uniprot:Q59LD0
Length = 583
Score = 148 (57.2 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 36/98 (36%), Positives = 51/98 (52%)
Query: 90 SYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFYSPQIESL 149
+Y+G F P E+HGG TYCALAS L+ + + ++ +S + + E L
Sbjct: 352 TYEGGFSNIPNTEAHGGYTYCALASYFLLYENRKQFSSGSTSSSSRSRSNIDW----EKL 407
Query: 150 KRWLIFRQ---RSGFQGRPNKPVDTCYTFWIGASLSIL 184
W + RQ + G GR NK VD CY FW+G S+L
Sbjct: 408 LEWSVHRQHELKGGVDGRTNKLVDACYGFWMGGLFSLL 445
Score = 58 (25.5 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 239 ESLKRWLIF---RQRSGFQGRPNKPVDTCYTFWIGASLSILNSA---TWIDEERLLLSVL 292
E L+++L+ + GF+ +P K VD +T + + LSIL + + DE R L +
Sbjct: 468 EKLRQYLLIIAQDESGGFKDKPGKQVDYYHTNYSLSGLSILEHSYKFSQDDEGRSLAFQI 527
Query: 293 DTQ 295
D +
Sbjct: 528 DVE 530
>UNIPROTKB|Q59LD0 [details] [associations]
symbol:RAM1 "Putative uncharacterized protein RAM1"
species:237561 "Candida albicans SC5314" [GO:0018342 "protein
prenylation" evidence=NAS] InterPro:IPR001330 InterPro:IPR026872
Pfam:PF00432 CGD:CAL0001670 GO:GO:0003824 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0042127 GO:GO:0018343 eggNOG:COG5029
GO:GO:0005965 GO:GO:0018342 PANTHER:PTHR11774:SF6 EMBL:AACQ01000259
RefSeq:XP_710548.1 ProteinModelPortal:Q59LD0 STRING:Q59LD0
GeneID:3647859 KEGG:cal:CaO19.5046 Uniprot:Q59LD0
Length = 583
Score = 148 (57.2 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 36/98 (36%), Positives = 51/98 (52%)
Query: 90 SYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFYSPQIESL 149
+Y+G F P E+HGG TYCALAS L+ + + ++ +S + + E L
Sbjct: 352 TYEGGFSNIPNTEAHGGYTYCALASYFLLYENRKQFSSGSTSSSSRSRSNIDW----EKL 407
Query: 150 KRWLIFRQ---RSGFQGRPNKPVDTCYTFWIGASLSIL 184
W + RQ + G GR NK VD CY FW+G S+L
Sbjct: 408 LEWSVHRQHELKGGVDGRTNKLVDACYGFWMGGLFSLL 445
Score = 58 (25.5 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 239 ESLKRWLIF---RQRSGFQGRPNKPVDTCYTFWIGASLSILNSA---TWIDEERLLLSVL 292
E L+++L+ + GF+ +P K VD +T + + LSIL + + DE R L +
Sbjct: 468 EKLRQYLLIIAQDESGGFKDKPGKQVDYYHTNYSLSGLSILEHSYKFSQDDEGRSLAFQI 527
Query: 293 DTQ 295
D +
Sbjct: 528 DVE 530
>CGD|CAL0001576 [details] [associations]
symbol:CDC43 species:5476 "Candida albicans" [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IDA]
[GO:0018344 "protein geranylgeranylation" evidence=IDA] [GO:0004662
"CAAX-protein geranylgeranyltransferase activity"
evidence=IGI;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004661 "protein
geranylgeranyltransferase activity" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0007163
"establishment or maintenance of cell polarity" evidence=IEA]
[GO:0034411 "cell wall (1->3)-beta-D-glucan biosynthetic process"
evidence=IEA] InterPro:IPR001330 Pfam:PF00432 CGD:CAL0001576
InterPro:IPR008930 SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0005953
GO:GO:0004662 GO:GO:0018344 KO:K11713 EMBL:AACQ01000309
RefSeq:XP_710190.1 PDB:3DRA PDBsum:3DRA ProteinModelPortal:Q59KC5
STRING:Q59KC5 GeneID:3648206 KEGG:cal:CaO19.1803
EvolutionaryTrace:Q59KC5 Uniprot:Q59KC5
Length = 384
Score = 153 (58.9 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 50/150 (33%), Positives = 75/150 (50%)
Query: 83 EFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMN-KLDTLRPTQASLYLDLVKSFLF 141
+FI ++ +G F ESH G T+CA+ASL L+N L+ L+ T+ L V
Sbjct: 198 QFILDRININGGFSSTIMDESHLGFTFCAIASLKLLNYPLEKLKSTKEWLIHRQVDYPEN 257
Query: 142 YSPQIESLKRWLIFRQRS--GFQGRPNKPVDTCYTFWIGASL-SI-LNAATWID---EER 194
P+ + + +R GF GR NK DTCY++W SL +I +N +D E
Sbjct: 258 LYPKDGNGDNYEYYRNIDIGGFNGRENKLSDTCYSWWCTGSLYNIDVNFIKLVDLNKAED 317
Query: 195 LLLSVLDTQHMTGGLSKWSDTQADILHTYL 224
LL+ Q + GG + D+ D +H+YL
Sbjct: 318 YLLNKTQNQ-LFGGFGRDPDSTPDPMHSYL 346
>UNIPROTKB|Q59KC5 [details] [associations]
symbol:CDC43 "Putative uncharacterized protein CDC43"
species:237561 "Candida albicans SC5314" [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IGI;IDA] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IDA]
[GO:0018344 "protein geranylgeranylation" evidence=IDA]
InterPro:IPR001330 Pfam:PF00432 CGD:CAL0001576 InterPro:IPR008930
SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0005953 GO:GO:0004662
GO:GO:0018344 KO:K11713 EMBL:AACQ01000309 RefSeq:XP_710190.1
PDB:3DRA PDBsum:3DRA ProteinModelPortal:Q59KC5 STRING:Q59KC5
GeneID:3648206 KEGG:cal:CaO19.1803 EvolutionaryTrace:Q59KC5
Uniprot:Q59KC5
Length = 384
Score = 153 (58.9 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 50/150 (33%), Positives = 75/150 (50%)
Query: 83 EFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMN-KLDTLRPTQASLYLDLVKSFLF 141
+FI ++ +G F ESH G T+CA+ASL L+N L+ L+ T+ L V
Sbjct: 198 QFILDRININGGFSSTIMDESHLGFTFCAIASLKLLNYPLEKLKSTKEWLIHRQVDYPEN 257
Query: 142 YSPQIESLKRWLIFRQRS--GFQGRPNKPVDTCYTFWIGASL-SI-LNAATWID---EER 194
P+ + + +R GF GR NK DTCY++W SL +I +N +D E
Sbjct: 258 LYPKDGNGDNYEYYRNIDIGGFNGRENKLSDTCYSWWCTGSLYNIDVNFIKLVDLNKAED 317
Query: 195 LLLSVLDTQHMTGGLSKWSDTQADILHTYL 224
LL+ Q + GG + D+ D +H+YL
Sbjct: 318 YLLNKTQNQ-LFGGFGRDPDSTPDPMHSYL 346
>ZFIN|ZDB-GENE-030131-2220 [details] [associations]
symbol:fntb "farnesyltransferase, CAAX box, beta"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=IEA]
[GO:0005965 "protein farnesyltransferase complex" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] InterPro:IPR001330
InterPro:IPR026872 Pfam:PF00432 ZFIN:ZDB-GENE-030131-2220
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0042127
GO:GO:0018343 eggNOG:COG5029 GO:GO:0005965 HOGENOM:HOG000190594
KO:K05954 PANTHER:PTHR11774:SF6 CTD:2342
GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173 OMA:HPVYNIC
OrthoDB:EOG4KKZ33 EMBL:AL928866 EMBL:BX255891 EMBL:BC071443
IPI:IPI00492729 RefSeq:NP_001002128.1 UniGene:Dr.77794 SMR:Q6IQG3
STRING:Q6IQG3 Ensembl:ENSDART00000038149 GeneID:323500
KEGG:dre:323500 InParanoid:Q6IQG3 NextBio:20808280 Uniprot:Q6IQG3
Length = 419
Score = 146 (56.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 74/279 (26%), Positives = 116/279 (41%)
Query: 83 EFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFY 142
+F+ R + G FG GP ++H TY A+ +L ++ + LD FL+
Sbjct: 113 QFLARCQAPTGGFGGGPGQQAHLAPTYAAVNALCILGTEEAYNVINRETLLD----FLYS 168
Query: 143 SPQIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDT 202
Q + F G G + V + Y ASL+ + A T D ++
Sbjct: 169 VKQPDGS-----FVMHIG--GEVD--VRSAYCAASVASLTNIIAPTLFDGTHNW--IISC 217
Query: 203 QHMTGGLSKWSDTQADILHTYLGE--FFVRPRIIKTQIESLKRWLIFRQ---RSGFQGRP 257
Q+ GGL +A +T+ G + + +++L RW+ RQ GFQGR
Sbjct: 218 QNWEGGLGGVPGLEAHGGYTFCGTAALVILGKEHMLDLKALLRWVTSRQMRFEGGFQGRC 277
Query: 258 NKPVDTCYTFWIGASLSILNSA------------TWIDEERLLLS--VLDTQHMTGGLSK 303
NK VD CY+FW L +L+ A +W+ E + L +L Q+ GGL
Sbjct: 278 NKLVDGCYSFWQAGLLPLLHRALFKEGDSTLSVSSWMFERKALQEYILLCCQNPGGGLLD 337
Query: 304 WSDTQADILHT-Y-LEAMSHASRNKLKERNFQLPLDKKD 340
D HT Y L +S A K+ + +L L + +
Sbjct: 338 KPGKSRDFYHTSYCLSGLSVAQHFGNKDLHNELILGRDE 376
>DICTYBASE|DDB_G0270948 [details] [associations]
symbol:fntB "protein farnesyltransferase beta
subunit" species:44689 "Dictyostelium discoideum" [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0018343
"protein farnesylation" evidence=IEA;ISS] [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA;ISS] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004660 "protein
farnesyltransferase activity" evidence=IEA;ISS] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
dictyBase:DDB_G0270948 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0042127
GO:GO:0018343 eggNOG:COG5029 GO:GO:0005965 GO:GO:0004660 KO:K05954
OMA:QDASQPW PANTHER:PTHR11774:SF6 RefSeq:XP_646280.1 HSSP:P49356
ProteinModelPortal:Q55D51 EnsemblProtists:DDB0237553 GeneID:8617235
KEGG:ddi:DDB_G0270948 Uniprot:Q55D51
Length = 500
Score = 146 (56.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 54/191 (28%), Positives = 89/191 (46%)
Query: 93 GAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFYSPQIESLKRW 152
G FG G SH ST+ A+++L ++ T+ S Y + + ++ + L R
Sbjct: 136 GGFGGGNSHTSHVVSTFAAVSALYVIG-------TEES-YKTIDREAMY-----KFLMR- 181
Query: 153 LIFRQRSG-FQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQHMTGGLSK 211
+ + G F D+ T+ A S+LN T E ++ +L Q GG
Sbjct: 182 --MKTKEGAFTSEDGGEYDSRTTYCAIAVASMLNILTAELERGVVDFLLSCQTYEGGFGA 239
Query: 212 WSDTQADILHTY--LGEFFVRPRIIKTQIESLKRWLIFRQRS--GFQGRPNKPVDTCYTF 267
+ +A +T+ + + + K + SL RW+ +RQ + GF+GR NK VDTCY++
Sbjct: 240 YPFNEAHGGYTFCSVAALSILNSLHKIDMNSLHRWITYRQSNDGGFEGRTNKLVDTCYSY 299
Query: 268 WIGASLSILNS 278
W GA I+ S
Sbjct: 300 WQGAVYIIIQS 310
Score = 123 (48.4 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 22/69 (31%), Positives = 42/69 (60%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCAL 112
G+ D R +CA ++ +L+ + ++F+ +Y+G FG P E+HGG T+C++
Sbjct: 195 GEYDSRTTYCAIAVASMLNILTAELERGVVDFLLSCQTYEGGFGAYPFNEAHGGYTFCSV 254
Query: 113 ASLALMNKL 121
A+L+++N L
Sbjct: 255 AALSILNSL 263
Score = 42 (19.8 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 156 RQRSGFQGRPNKPVD---TCYTFWIGASLSILN 185
++ SGF P++ D TCY G SLS N
Sbjct: 355 KKYSGFSDHPHRGKDYYHTCYGL-SGISLSQYN 386
>TAIR|locus:2173802 [details] [associations]
symbol:ERA1 "ENHANCED RESPONSE TO ABA 1" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004660 "protein farnesyltransferase activity"
evidence=IMP] [GO:0005965 "protein farnesyltransferase complex"
evidence=IMP] [GO:0018342 "protein prenylation" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009414 "response
to water deprivation" evidence=IMP] [GO:0009788 "negative
regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
[GO:0004311 "farnesyltranstransferase activity" evidence=ISS]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
[GO:0009934 "regulation of meristem structural organization"
evidence=IMP] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0009414
GO:GO:0042127 GO:GO:0009788 GO:GO:0018343 EMBL:AB010699
GO:GO:0009934 eggNOG:COG5029 GO:GO:0004311 GO:GO:0005965
GO:GO:0004660 GO:GO:0018342 EMBL:AF214106 EMBL:BT030457 EMBL:U46574
EMBL:U44849 IPI:IPI00543310 RefSeq:NP_198844.1 UniGene:At.9205
ProteinModelPortal:Q38920 SMR:Q38920 IntAct:Q38920 STRING:Q38920
PaxDb:Q38920 PRIDE:Q38920 EnsemblPlants:AT5G40280.1 GeneID:834026
KEGG:ath:AT5G40280 TAIR:At5g40280 HOGENOM:HOG000190594
InParanoid:Q38920 KO:K05954 OMA:QDASQPW ProtClustDB:PLN02710
BioCyc:ARA:AT5G40280-MONOMER BioCyc:MetaCyc:AT5G40280-MONOMER
ArrayExpress:Q38920 Genevestigator:Q38920 GermOnline:AT5G40280
PANTHER:PTHR11774:SF6 Uniprot:Q38920
Length = 482
Score = 145 (56.1 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 61/204 (29%), Positives = 88/204 (43%)
Query: 79 ARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKS 138
+ ++F+ R +G +G GP H +TY A+ N L TL +A ++ K
Sbjct: 132 SNAIDFLGRCQGSEGGYGGGPGQLPHLATTYAAV------NALVTLGGDKALSSINREKM 185
Query: 139 FLFYSPQIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLS 198
F ++ FR G + V CYT I + SILN DE L
Sbjct: 186 SCFLRRMKDTSGG---FRMHD--MGEMD--VRACYTA-ISVA-SILNIMD--DELTQGLG 234
Query: 199 --VLDTQHMTGGLSKWSDTQADILHTYLG--EFFVRPRIIKTQIESLKRWLIFRQ--RSG 252
+L Q GG+ ++A +TY G + + + ++SL W + RQ G
Sbjct: 235 DYILSCQTYEGGIGGEPGSEAHGGYTYCGLAAMILINEVDRLNLDSLMNWAVHRQGVEMG 294
Query: 253 FQGRPNKPVDTCYTFWIGASLSIL 276
FQGR NK VD CYTFW A +L
Sbjct: 295 FQGRTNKLVDGCYTFWQAAPCVLL 318
Score = 121 (47.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 32/102 (31%), Positives = 53/102 (51%)
Query: 24 LALVYRLQISTSLRSFTTPCFSFKCTLAD-GDCDMRFVFCACSICYILDDWSGMDRARCL 82
L+ + R ++S LR F+ + D G+ D+R + A S+ IL+
Sbjct: 177 LSSINREKMSCFLRRMKDTSGGFR--MHDMGEMDVRACYTAISVASILNIMDDELTQGLG 234
Query: 83 EFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTL 124
++I +Y+G G P E+HGG TYC LA++ L+N++D L
Sbjct: 235 DYILSCQTYEGGIGGEPGSEAHGGYTYCGLAAMILINEVDRL 276
Score = 61 (26.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 241 LKRWLIFRQR---SGFQGRPNKPVDTCYTFWIGASLSILNSATWI-DEERLLLSVLDTQH 296
L+R+++ + GF+ +P KP D +T + + LS+ A W+ DE+ L T+
Sbjct: 394 LQRYVLLCSKIPDGGFRDKPRKPRDFYHTCYCLSGLSVAQHA-WLKDEDTPPL----TRD 448
Query: 297 MTGGLSKWSDTQADILH 313
+ GG S + +LH
Sbjct: 449 IMGGYSNLLEP-VQLLH 464
Score = 60 (26.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 149 LKRWLIFRQR---SGFQGRPNKPVDTCYTFWIGASLSILNAATWI-DEERLLLSVLDTQH 204
L+R+++ + GF+ +P KP D +T + + LS+ A W+ DE+ L T+
Sbjct: 394 LQRYVLLCSKIPDGGFRDKPRKPRDFYHTCYCLSGLSVAQHA-WLKDEDTPPL----TRD 448
Query: 205 MTGGLSKWSDTQADILH 221
+ GG S + +LH
Sbjct: 449 IMGGYSNLLEP-VQLLH 464
>SGD|S000002248 [details] [associations]
symbol:RAM1 "Beta subunit of the CAAX farnesyltransferase
(FTase)" species:4932 "Saccharomyces cerevisiae" [GO:0005965
"protein farnesyltransferase complex" evidence=IEA;IDA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0018343
"protein farnesylation" evidence=IEA;IDA] [GO:0004660 "protein
farnesyltransferase activity" evidence=IEA;IDA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 SGD:S000002248
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 EMBL:BK006938
GO:GO:0042127 GO:GO:0018343 EMBL:X95644 eggNOG:COG5029
GO:GO:0005965 GO:GO:0004660 HOGENOM:HOG000190594 KO:K05954
PANTHER:PTHR11774:SF6 GeneTree:ENSGT00550000075042 OMA:YWIANSL
OrthoDB:EOG4ZPJ4B EMBL:M22753 EMBL:Z74138 EMBL:AY692971 PIR:S67626
RefSeq:NP_010193.1 ProteinModelPortal:P22007 SMR:P22007
DIP:DIP-1556N IntAct:P22007 MINT:MINT-396276 STRING:P22007
PaxDb:P22007 EnsemblFungi:YDL090C GeneID:851468 KEGG:sce:YDL090C
CYGD:YDL090c BindingDB:P22007 ChEMBL:CHEMBL4122 NextBio:968756
Genevestigator:P22007 GermOnline:YDL090C Uniprot:P22007
Length = 431
Score = 144 (55.7 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 49/154 (31%), Positives = 69/154 (44%)
Query: 36 LRSFTTPCFSFKCTLADGDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAF 95
L S P FK L G+ D R ++CA SI +L+ + L ++ +Y+G F
Sbjct: 189 LISLKEPNGGFKTCLEVGEVDTRGIYCALSIATLLNILTEELTEGVLNYLKNCQNYEGGF 248
Query: 96 GQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFYSPQIESLKRWLIF 155
G P ++ G Y A+ +L LR +D + +E L W
Sbjct: 249 GSCPHVDEAHGG-YTFCATASLA----ILRS------MDQIN--------VEKLLEWSSA 289
Query: 156 RQ---RSGFQGRPNKPVDTCYTFWIGASLSILNA 186
RQ GF GR NK VD CY+FW+G S +IL A
Sbjct: 290 RQLQEERGFCGRSNKLVDGCYSFWVGGSAAILEA 323
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 62/221 (28%), Positives = 95/221 (42%)
Query: 69 ILD-DWSGMDRAR-CLEFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTL-- 124
++D DW D R ++ +F G FG GP SH STY A+ +L+L + +D
Sbjct: 119 VMDRDWLSDDTKRKIVDKLFTISPSGGPFGGGPGQLSHLASTYAAINALSLCDNIDGCWD 178
Query: 125 RPTQASLYLDLVKSFLFYSPQIESLKRWLIFRQRSGFQGRPNK-PVDTCYTFWIGASLSI 183
R + +Y L+ SLK GF+ VDT + + ++
Sbjct: 179 RIDRKGIYQWLI-----------SLKE-----PNGGFKTCLEVGEVDTRGIYCALSIATL 222
Query: 184 LNAATWIDEERLLLSVLDTQHMTGGLSKWSDT-QADILHTYLG--EFFVRPRIIKTQIES 240
LN T E +L + + Q+ GG +A +T+ + + + +E
Sbjct: 223 LNILTEELTEGVLNYLKNCQNYEGGFGSCPHVDEAHGGYTFCATASLAILRSMDQINVEK 282
Query: 241 LKRWLIFRQ---RSGFQGRPNKPVDTCYTFWIGASLSILNS 278
L W RQ GF GR NK VD CY+FW+G S +IL +
Sbjct: 283 LLEWSSARQLQEERGFCGRSNKLVDGCYSFWVGGSAAILEA 323
>WB|WBGene00006465 [details] [associations]
symbol:fntb-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] InterPro:IPR001330
InterPro:IPR026872 Pfam:PF00432 GO:GO:0009792 GO:GO:0003824
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042127 GO:GO:0018343
eggNOG:COG5029 EMBL:Z77659 GO:GO:0005965 HOGENOM:HOG000190594
KO:K05954 PANTHER:PTHR11774:SF6 GeneTree:ENSGT00550000075042
OMA:HPVYNIC HSSP:P49356 PIR:T21291 RefSeq:NP_506580.1
ProteinModelPortal:Q19752 IntAct:Q19752 STRING:Q19752 PaxDb:Q19752
EnsemblMetazoa:F23B12.6.1 EnsemblMetazoa:F23B12.6.2
EnsemblMetazoa:F23B12.6.3 GeneID:179946 KEGG:cel:CELE_F23B12.6
UCSC:F23B12.6.1 CTD:179946 WormBase:F23B12.6 InParanoid:Q19752
NextBio:907502 Uniprot:Q19752
Length = 401
Score = 136 (52.9 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 68/256 (26%), Positives = 103/256 (40%)
Query: 92 DGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFYSPQIESLKR 151
+G +G GP +H TY A+ L + K + LR ++ V F F LK+
Sbjct: 125 EGGYGGGPGQLAHLAPTYAAVMCLVSLQKEEALRS------INRVTLFNF-------LKK 171
Query: 152 WLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDE--ERLLLSVLDTQHMTGGL 209
+ GF +D + A+ I+ +DE + ++ Q GG
Sbjct: 172 CK--HESGGFYMHEGGEIDMRSAYCALATCEIVGLP--MDEISNGVAEWIISCQSFEGGF 227
Query: 210 SKWSDTQADILHTY--LGEFFVRPRIIKTQIESLKRWLIFRQ---RSGFQGRPNKPVDTC 264
T+A +T+ + + R +E L RW RQ GFQGR NK VD C
Sbjct: 228 GGEPYTEAHGGYTFCAVASLVLLNRFRLADMEGLLRWATRRQMRFEGGFQGRTNKLVDGC 287
Query: 265 YTFWIGASLSILNSAT---------WIDEERLLLS--VLDTQHMTGGLSKWSDTQADILH 313
Y+FW GA +L+ + E R+L ++ Q + GG D D+ H
Sbjct: 288 YSFWQGAIFPLLDGEMEREGRSLEKGLFEARMLEEYILVGCQSVHGGFKDKPDKPVDLYH 347
Query: 314 T-Y-LEAMSHASRNKL 327
T Y L +S A + L
Sbjct: 348 TCYVLSGLSVAQKYSL 363
Score = 133 (51.9 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 29/70 (41%), Positives = 41/70 (58%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRAR--CLEFIFRSLSYDGAFGQGPCLESHGGSTYC 110
G+ DMR +CA + C I+ MD E+I S++G FG P E+HGG T+C
Sbjct: 185 GEIDMRSAYCALATCEIVG--LPMDEISNGVAEWIISCQSFEGGFGGEPYTEAHGGYTFC 242
Query: 111 ALASLALMNK 120
A+ASL L+N+
Sbjct: 243 AVASLVLLNR 252
>UNIPROTKB|Q19752 [details] [associations]
symbol:fntb-1 "Protein FNTB-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 GO:GO:0009792
GO:GO:0003824 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042127
GO:GO:0018343 eggNOG:COG5029 EMBL:Z77659 GO:GO:0005965
HOGENOM:HOG000190594 KO:K05954 PANTHER:PTHR11774:SF6
GeneTree:ENSGT00550000075042 OMA:HPVYNIC HSSP:P49356 PIR:T21291
RefSeq:NP_506580.1 ProteinModelPortal:Q19752 IntAct:Q19752
STRING:Q19752 PaxDb:Q19752 EnsemblMetazoa:F23B12.6.1
EnsemblMetazoa:F23B12.6.2 EnsemblMetazoa:F23B12.6.3 GeneID:179946
KEGG:cel:CELE_F23B12.6 UCSC:F23B12.6.1 CTD:179946 WormBase:F23B12.6
InParanoid:Q19752 NextBio:907502 Uniprot:Q19752
Length = 401
Score = 136 (52.9 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 68/256 (26%), Positives = 103/256 (40%)
Query: 92 DGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFYSPQIESLKR 151
+G +G GP +H TY A+ L + K + LR ++ V F F LK+
Sbjct: 125 EGGYGGGPGQLAHLAPTYAAVMCLVSLQKEEALRS------INRVTLFNF-------LKK 171
Query: 152 WLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDE--ERLLLSVLDTQHMTGGL 209
+ GF +D + A+ I+ +DE + ++ Q GG
Sbjct: 172 CK--HESGGFYMHEGGEIDMRSAYCALATCEIVGLP--MDEISNGVAEWIISCQSFEGGF 227
Query: 210 SKWSDTQADILHTY--LGEFFVRPRIIKTQIESLKRWLIFRQ---RSGFQGRPNKPVDTC 264
T+A +T+ + + R +E L RW RQ GFQGR NK VD C
Sbjct: 228 GGEPYTEAHGGYTFCAVASLVLLNRFRLADMEGLLRWATRRQMRFEGGFQGRTNKLVDGC 287
Query: 265 YTFWIGASLSILNSAT---------WIDEERLLLS--VLDTQHMTGGLSKWSDTQADILH 313
Y+FW GA +L+ + E R+L ++ Q + GG D D+ H
Sbjct: 288 YSFWQGAIFPLLDGEMEREGRSLEKGLFEARMLEEYILVGCQSVHGGFKDKPDKPVDLYH 347
Query: 314 T-Y-LEAMSHASRNKL 327
T Y L +S A + L
Sbjct: 348 TCYVLSGLSVAQKYSL 363
Score = 133 (51.9 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 29/70 (41%), Positives = 41/70 (58%)
Query: 53 GDCDMRFVFCACSICYILDDWSGMDRAR--CLEFIFRSLSYDGAFGQGPCLESHGGSTYC 110
G+ DMR +CA + C I+ MD E+I S++G FG P E+HGG T+C
Sbjct: 185 GEIDMRSAYCALATCEIVG--LPMDEISNGVAEWIISCQSFEGGFGGEPYTEAHGGYTFC 242
Query: 111 ALASLALMNK 120
A+ASL L+N+
Sbjct: 243 AVASLVLLNR 252
>UNIPROTKB|B3KSC2 [details] [associations]
symbol:CHURC1-FNTB "cDNA FLJ35979 fis, clone TESTI2013545,
highly similar to Protein farnesyltransferase subunit beta (EC
2.5.1.58)" species:9606 "Homo sapiens" [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
GO:GO:0008285 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008144
GO:GO:0008270 GO:GO:0034097 GO:GO:0014070 GO:GO:0042277
GO:GO:0010035 GO:GO:0042060 GO:GO:0018343 GO:GO:0048146
GO:GO:0045787 GO:GO:0004311 GO:GO:0005965 GO:GO:0004660
GO:GO:0019840 PANTHER:PTHR11774:SF6 UniGene:Hs.325531 EMBL:AL139022
EMBL:AL135745 EMBL:AK093298 IPI:IPI01011588 SMR:B3KSC2
STRING:B3KSC2 Ensembl:ENST00000448390 UCSC:uc001xid.3
HGNC:HGNC:42960 HOVERGEN:HBG102605 Uniprot:B3KSC2
Length = 193
Score = 100 (40.3 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 143 SPQIESLKRWLIFRQ---RSGFQGRPNKPVDTCYTFWIGASLSILNAA 187
S ++SL +W+ RQ GFQGR NK VD CY+FW L +L+ A
Sbjct: 23 SLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRA 70
Score = 99 (39.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 238 IESLKRWLIFRQ---RSGFQGRPNKPVDTCYTFWIGASLSILNSA 279
++SL +W+ RQ GFQGR NK VD CY+FW L +L+ A
Sbjct: 26 LKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRA 70
Score = 62 (26.9 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 9/20 (45%), Positives = 16/20 (80%)
Query: 101 LESHGGSTYCALASLALMNK 120
+E+HGG T+C LA+L ++ +
Sbjct: 1 MEAHGGYTFCGLAALVILKR 20
>FB|FBgn0038424 [details] [associations]
symbol:CG17565 species:7227 "Drosophila melanogaster"
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=ISS] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=ISS] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 EMBL:AE014297
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042127 GO:GO:0018343
eggNOG:COG5029 GO:GO:0005965 GO:GO:0004663 KO:K05954
PANTHER:PTHR11774:SF6 GeneTree:ENSGT00550000075042 OMA:HPVYNIC
EMBL:AY051869 RefSeq:NP_650540.1 UniGene:Dm.4459 HSSP:Q02293
SMR:Q9VEV7 STRING:Q9VEV7 EnsemblMetazoa:FBtr0083286 GeneID:41989
KEGG:dme:Dmel_CG17565 UCSC:CG17565-RA FlyBase:FBgn0038424
InParanoid:Q9VEV7 OrthoDB:EOG4NP5JX GenomeRNAi:41989 NextBio:826605
Uniprot:Q9VEV7
Length = 419
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 30/81 (37%), Positives = 49/81 (60%)
Query: 45 SFKCTLADGDCDMRFVFCACSICYILDDWSGMDR---ARCLEFIFRSLSYDGAFGQGPCL 101
SF+ + DG+ D+R +CA S +L+ + + A ++I + +Y+G FG P L
Sbjct: 177 SFRLHV-DGETDVRGAYCAISCAKLLNLPEPVIKELFAGTGDWIAQCQTYEGGFGGAPGL 235
Query: 102 ESHGGSTYCALASLALMNKLD 122
E+HGG T+C +A LAL+N+ D
Sbjct: 236 EAHGGYTFCGIAGLALLNEAD 256
Score = 126 (49.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 70/267 (26%), Positives = 110/267 (41%)
Query: 82 LEFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLF 141
++F+ S G FG GP +H TY A+ SL ++ R LV+ FLF
Sbjct: 114 VQFLSNCRSPTGGFGGGPGQYAHLAPTYAAVNSLCIIGSEQAYRAIDRPT---LVQ-FLF 169
Query: 142 YSPQIESLKRWLIFRQRSG-FQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLS-- 198
S+ R G F+ + D + + +LN + +E +
Sbjct: 170 ------SV------RDSDGSFRLHVDGETDVRGAYCAISCAKLLNLPEPVIKELFAGTGD 217
Query: 199 -VLDTQHMTGGLSKWSDTQADILHTYLG--EFFVRPRIIKTQIESLKRWLIFRQRS---G 252
+ Q GG +A +T+ G + K ++L +W + RQ + G
Sbjct: 218 WIAQCQTYEGGFGGAPGLEAHGGYTFCGIAGLALLNEADKCDRQALLKWTLRRQMTYEGG 277
Query: 253 FQGRPNKPVDTCYTFWIGASLSILNSA-TWIDE--ERLLLSV--------LDTQHMTGGL 301
FQGR NK VD CY+FW+GA++ I + + +D+ E L V L Q +GGL
Sbjct: 278 FQGRTNKLVDGCYSFWVGATIPITQATLSGVDKQMEHTLFDVEALQEYILLCCQKQSGGL 337
Query: 302 SKWSDTQADILHT-Y-LEAMSHASRNK 326
D+ HT Y L +S A ++
Sbjct: 338 IDKPGKPQDLYHTCYTLSGVSIAQHSE 364
>ASPGD|ASPL0000050108 [details] [associations]
symbol:AN2002 species:162425 "Emericella nidulans"
[GO:0004660 "protein farnesyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0010958 "regulation of amino acid
import" evidence=IEA] [GO:0018343 "protein farnesylation"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0016740 EMBL:BN001307
GO:GO:0042127 GO:GO:0018343 GO:GO:0005965 HOGENOM:HOG000190594
PANTHER:PTHR11774:SF6 ProteinModelPortal:C8VLC9
EnsemblFungi:CADANIAT00008669 OMA:CEGGEED Uniprot:C8VLC9
Length = 519
Score = 127 (49.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 83 EFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFY 142
E++ R +++G P E+HG +CALA L ++ + + P +D
Sbjct: 288 EYLSRCQTFEGGISGSPGSEAHGAYAFCALACLCILGEPEATIPK----CMD-------- 335
Query: 143 SPQIESLKRWLIFRQ---RSGFQGRPNKPVDTCYTFWIGASLSILNAA 187
++ L WL RQ GF GR NK VD CY+ W+G+ ++ +A
Sbjct: 336 ---VQMLLSWLSARQYAPEGGFAGRTNKLVDGCYSHWVGSCWPLIQSA 380
Score = 95 (38.5 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 238 IESLKRWLIFRQ---RSGFQGRPNKPVDTCYTFWIGASLSILNSA 279
++ L WL RQ GF GR NK VD CY+ W+G+ ++ SA
Sbjct: 336 VQMLLSWLSARQYAPEGGFAGRTNKLVDGCYSHWVGSCWPLIQSA 380
Score = 57 (25.1 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 60 VFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALM 118
++ A + +L + R R + I + G FG G SH S+Y A+ SLA++
Sbjct: 153 IYWALAALSLLGEDLSRHRERAIATITPMQNPTGGFGGGHGQISHCASSYAAVLSLAMV 211
Score = 57 (25.1 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 30/104 (28%), Positives = 41/104 (39%)
Query: 109 YCALASLALMNKLDTLRP-TQASLY-LDLVKSFLFYSPQIESLKRWLIFRQRSGFQGRPN 166
YCA+ ++L+N TL P +A Y L+ L+ E L R F G G P
Sbjct: 253 YCAMVIISLLNLPLTLPPEAKAREYGLETFTDGLW-----EYLSRCQTFE--GGISGSPG 305
Query: 167 KPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDTQHMTGGLS 210
Y F A L IL + E + +D Q + LS
Sbjct: 306 SEAHGAYAFCALACLCILG-----EPEATIPKCMDVQMLLSWLS 344
>POMBASE|SPAC17G6.04c [details] [associations]
symbol:cpp1 "protein farnesyltransferase beta subunit
Cpp1" species:4896 "Schizosaccharomyces pombe" [GO:0004660 "protein
farnesyltransferase activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005965 "protein farnesyltransferase complex" evidence=IEA]
[GO:0006612 "protein targeting to membrane" evidence=IC]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IGI] [GO:0008270 "zinc ion binding" evidence=NAS]
[GO:0010958 "regulation of amino acid import" evidence=IGI]
[GO:0018343 "protein farnesylation" evidence=IMP;IDA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026872 Pfam:PF00432 PomBase:SPAC17G6.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0006612
GO:GO:0008270 GO:GO:0042127 GO:GO:0018343 GO:GO:0006995
eggNOG:COG5029 GO:GO:0005965 GO:GO:0004660 HOGENOM:HOG000190594
KO:K05954 PANTHER:PTHR11774:SF6 OMA:HPVYNIC PIR:T37836
RefSeq:NP_594251.1 ProteinModelPortal:O13782 STRING:O13782
EnsemblFungi:SPAC17G6.04c.1 GeneID:2542380 KEGG:spo:SPAC17G6.04c
OrthoDB:EOG4ZPJ4B NextBio:20803439 GO:GO:0010958 Uniprot:O13782
Length = 382
Score = 124 (48.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 59/205 (28%), Positives = 94/205 (45%)
Query: 25 ALVYRLQISTSLRSFTTPCFSFKCTLADGDCDMRFVF---CACSICYI-LDD--WSGMDR 78
+L+ R ++ L S P SF+ +G+ D R V+ C S+ I +DD + G
Sbjct: 125 SLIERDRLYDWLFSLKNPDGSFRVN-NEGESDARSVYAAVCVSSLVGISMDDPLFEGT-- 181
Query: 79 ARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKS 138
L+++ + +Y+G P E+HGG T+CALA++AL+ LD L + S +L +
Sbjct: 182 ---LQWLCKCQTYEGGLSGVPYAEAHGGYTFCALAAIALLGGLDNLNEIKLSTWLVQRQD 238
Query: 139 FLFYSPQIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLS 198
Y S K L+ S + G + V + Y SL L + + E+LL
Sbjct: 239 PALYGFSGRSNK--LVDGCYSWWVGASHVIVASGYGSASHKSLPNL----FYNPEKLLGY 292
Query: 199 VLDT-QHMTGGLSKWSDTQADILHT 222
+L Q +GGL + D HT
Sbjct: 293 ILQCCQSTSGGLRDKPPKRPDQYHT 317
Score = 102 (41.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 33/89 (37%), Positives = 45/89 (50%)
Query: 241 LKRWLIFRQRS---GFQGRPNKPVDTCYTFWIGASLSIL----NSAT-------WIDEER 286
L WL+ RQ GF GR NK VD CY++W+GAS I+ SA+ + + E+
Sbjct: 229 LSTWLVQRQDPALYGFSGRSNKLVDGCYSWWVGASHVIVASGYGSASHKSLPNLFYNPEK 288
Query: 287 LLLSVLDT-QHMTGGLSKWSDTQADILHT 314
LL +L Q +GGL + D HT
Sbjct: 289 LLGYILQCCQSTSGGLRDKPPKRPDQYHT 317
Score = 54 (24.1 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 60 VFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALM 118
+ C +C D +S ++R R +++F + DG+F ES S Y A+ +L+
Sbjct: 112 ILSIC-LCDSTDAYSLIERDRLYDWLFSLKNPDGSFRVNNEGESDARSVYAAVCVSSLV 169
>GENEDB_PFALCIPARUM|PF11_0483 [details] [associations]
symbol:PF11_0483 "farnesyltransferase beta
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005965
"protein farnesyltransferase complex" evidence=ISS] [GO:0008270
"zinc ion binding" evidence=ISS] [GO:0004660 "protein
farnesyltransferase activity" evidence=ISS] InterPro:IPR026872
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008270 GO:GO:0042127
GO:GO:0018343 EMBL:AE014186 GO:GO:0005965 GO:GO:0004660 KO:K05954
PANTHER:PTHR11774:SF6 RefSeq:XP_001348150.2
ProteinModelPortal:Q8IHP6 EnsemblProtists:PF11_0483:mRNA
GeneID:811026 KEGG:pfa:PF11_0483 EuPathDB:PlasmoDB:PF3D7_1147500
HOGENOM:HOG000282555 ProtClustDB:CLSZ2433480 ChEMBL:CHEMBL3645
Uniprot:Q8IHP6
Length = 923
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 45 SFKCTLADGDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESH 104
SF+ + +G+ DMR +CA SIC + + + ++I +Y+G F E H
Sbjct: 552 SFRVHI-NGEIDMRGTYCAISICSMCHILTNEVKKNVEKYILTCQNYEGGFTSEKFQECH 610
Query: 105 GGSTYCALASLALMNKLDTL 124
GG +YCALA+L ++ K++ +
Sbjct: 611 GGYSYCALATLCILGKVNKI 630
>UNIPROTKB|Q8IHP6 [details] [associations]
symbol:PF11_0483 "Farnesyltransferase beta subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004660
"protein farnesyltransferase activity" evidence=ISS] [GO:0005965
"protein farnesyltransferase complex" evidence=ISS] [GO:0008270
"zinc ion binding" evidence=ISS] InterPro:IPR026872
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008270 GO:GO:0042127
GO:GO:0018343 EMBL:AE014186 GO:GO:0005965 GO:GO:0004660 KO:K05954
PANTHER:PTHR11774:SF6 RefSeq:XP_001348150.2
ProteinModelPortal:Q8IHP6 EnsemblProtists:PF11_0483:mRNA
GeneID:811026 KEGG:pfa:PF11_0483 EuPathDB:PlasmoDB:PF3D7_1147500
HOGENOM:HOG000282555 ProtClustDB:CLSZ2433480 ChEMBL:CHEMBL3645
Uniprot:Q8IHP6
Length = 923
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 45 SFKCTLADGDCDMRFVFCACSICYILDDWSGMDRARCLEFIFRSLSYDGAFGQGPCLESH 104
SF+ + +G+ DMR +CA SIC + + + ++I +Y+G F E H
Sbjct: 552 SFRVHI-NGEIDMRGTYCAISICSMCHILTNEVKKNVEKYILTCQNYEGGFTSEKFQECH 610
Query: 105 GGSTYCALASLALMNKLDTL 124
GG +YCALA+L ++ K++ +
Sbjct: 611 GGYSYCALATLCILGKVNKI 630
>UNIPROTKB|B4E1A0 [details] [associations]
symbol:CHURC1-FNTB "cDNA FLJ58825, highly similar to
Protein farnesyltransferase subunit beta (EC 2.5.1.58)"
species:9606 "Homo sapiens" [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0042127
GO:GO:0018343 GO:GO:0005965 PANTHER:PTHR11774:SF6
HOVERGEN:HBG008173 UniGene:Hs.325531 EMBL:AL139022 EMBL:AL135745
HGNC:HGNC:42960 GeneID:100529261 KEGG:hsa:100529261 CTD:100529261
GenomeRNAi:100529261 EMBL:AK303739 IPI:IPI00984229
RefSeq:NP_001189487.1 SMR:B4E1A0 STRING:B4E1A0
Ensembl:ENST00000542227 UCSC:uc010tsm.2 Uniprot:B4E1A0
Length = 391
Score = 119 (46.9 bits), Expect = 0.00023, P = 0.00023
Identities = 55/204 (26%), Positives = 86/204 (42%)
Query: 83 EFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFY 142
+F+ S +G FG GP H TY A+ +L ++ T+ + Y D++
Sbjct: 82 QFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIG-------TEEA-Y-DIINR---- 128
Query: 143 SPQIESLKRWLI-FRQRSG-FQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVL 200
E L ++L +Q G F VD + + S+ N T E +
Sbjct: 129 ----EKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIA 184
Query: 201 DTQHMTGGLSKWSDTQADILHTYLG--EFFVRPRIIKTQIESLKRWLIFRQ---RSGFQG 255
Q+ GG+ +A +T+ G + R ++SL +W+ RQ GFQG
Sbjct: 185 RCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQG 244
Query: 256 RPNKPVDTCYTFWIGASLSILNSA 279
R NK VD CY+FW L +L+ A
Sbjct: 245 RCNKLVDGCYSFWQAGLLPLLHRA 268
>UNIPROTKB|P49356 [details] [associations]
symbol:FNTB "Protein farnesyltransferase subunit beta"
species:9606 "Homo sapiens" [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0042127 "regulation
of cell proliferation" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0018343 "protein farnesylation" evidence=IDA] [GO:0004660
"protein farnesyltransferase activity" evidence=IDA] [GO:0005875
"microtubule associated complex" evidence=IDA] InterPro:IPR001330
InterPro:IPR026872 Pfam:PF00432 GO:GO:0005875 GO:GO:0008285
EMBL:CH471061 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872
GO:GO:0008144 GO:GO:0008270 GO:GO:0034097 GO:GO:0014070
GO:GO:0042277 GO:GO:0010035 GO:GO:0042060 GO:GO:0018343
GO:GO:0048146 GO:GO:0045787 GO:GO:0004311 GO:GO:0005965
GO:GO:0004660 PDB:1JCQ PDB:1LD7 PDB:1LD8 PDB:1MZC PDB:1S63 PDB:1SA4
PDB:1TN6 PDB:2F0Y PDB:2H6F PDB:2H6G PDB:2H6H PDB:2H6I PDB:2IEJ
PDB:3E37 PDBsum:1JCQ PDBsum:1LD7 PDBsum:1LD8 PDBsum:1MZC
PDBsum:1S63 PDBsum:1SA4 PDBsum:1TN6 PDBsum:2F0Y PDBsum:2H6F
PDBsum:2H6G PDBsum:2H6H PDBsum:2H6I PDBsum:2IEJ PDBsum:3E37
GO:GO:0019840 KO:K05954 PANTHER:PTHR11774:SF6 CTD:2342
HOVERGEN:HBG008173 OrthoDB:EOG4KKZ33 EMBL:L00635 EMBL:AK315714
EMBL:BC020232 EMBL:L10414 IPI:IPI00026817 PIR:B49274
RefSeq:NP_002019.1 UniGene:Hs.325531 ProteinModelPortal:P49356
SMR:P49356 IntAct:P49356 MINT:MINT-238879 STRING:P49356
PhosphoSite:P49356 DMDM:1346696 PeptideAtlas:P49356 PRIDE:P49356
DNASU:2342 Ensembl:ENST00000246166 GeneID:2342 KEGG:hsa:2342
UCSC:uc001xia.3 GeneCards:GC14P065454 HGNC:HGNC:3785 MIM:134636
neXtProt:NX_P49356 PharmGKB:PA28202 InParanoid:P49356 OMA:YWIANSL
PhylomeDB:P49356 BindingDB:P49356 ChEMBL:CHEMBL272
EvolutionaryTrace:P49356 GenomeRNAi:2342 NextBio:9505
ArrayExpress:P49356 Bgee:P49356 CleanEx:HS_FNTB
Genevestigator:P49356 GermOnline:ENSG00000125954 Uniprot:P49356
Length = 437
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 55/204 (26%), Positives = 86/204 (42%)
Query: 83 EFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFY 142
+F+ S +G FG GP H TY A+ +L ++ T+ + Y D++
Sbjct: 128 QFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIG-------TEEA-Y-DIINR---- 174
Query: 143 SPQIESLKRWLI-FRQRSG-FQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVL 200
E L ++L +Q G F VD + + S+ N T E +
Sbjct: 175 ----EKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIA 230
Query: 201 DTQHMTGGLSKWSDTQADILHTYLG--EFFVRPRIIKTQIESLKRWLIFRQ---RSGFQG 255
Q+ GG+ +A +T+ G + R ++SL +W+ RQ GFQG
Sbjct: 231 RCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQG 290
Query: 256 RPNKPVDTCYTFWIGASLSILNSA 279
R NK VD CY+FW L +L+ A
Sbjct: 291 RCNKLVDGCYSFWQAGLLPLLHRA 314
>UNIPROTKB|B4DL54 [details] [associations]
symbol:CHURC1-FNTB "cDNA FLJ59570, highly similar to
Protein farnesyltransferase subunit beta (EC 2.5.1.58)"
species:9606 "Homo sapiens" [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] InterPro:IPR001330
InterPro:IPR009508 InterPro:IPR026872 Pfam:PF00432 Pfam:PF06573
ProDom:PD355092 GO:GO:0007275 GO:GO:0045893 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0008270 GO:GO:0042127
GO:GO:0018343 GO:GO:0005965 HOGENOM:HOG000190594
PANTHER:PTHR11774:SF6 HOVERGEN:HBG008173 OMA:HPVYNIC
UniGene:Hs.325531 EMBL:AL139022 EMBL:AL135745 HGNC:HGNC:42960
EMBL:AK296850 IPI:IPI00909112 RefSeq:NP_001189488.1 SMR:B4DL54
STRING:B4DL54 Ensembl:ENST00000447296 GeneID:100529261
KEGG:hsa:100529261 UCSC:uc010tsl.2 CTD:100529261
GenomeRNAi:100529261 Uniprot:B4DL54
Length = 471
Score = 119 (46.9 bits), Expect = 0.00031, P = 0.00031
Identities = 55/204 (26%), Positives = 86/204 (42%)
Query: 83 EFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFY 142
+F+ S +G FG GP H TY A+ +L ++ T+ + Y D++
Sbjct: 162 QFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIG-------TEEA-Y-DIINR---- 208
Query: 143 SPQIESLKRWLI-FRQRSG-FQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVL 200
E L ++L +Q G F VD + + S+ N T E +
Sbjct: 209 ----EKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIA 264
Query: 201 DTQHMTGGLSKWSDTQADILHTYLG--EFFVRPRIIKTQIESLKRWLIFRQ---RSGFQG 255
Q+ GG+ +A +T+ G + R ++SL +W+ RQ GFQG
Sbjct: 265 RCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQG 324
Query: 256 RPNKPVDTCYTFWIGASLSILNSA 279
R NK VD CY+FW L +L+ A
Sbjct: 325 RCNKLVDGCYSFWQAGLLPLLHRA 348
>UNIPROTKB|H0YHI0 [details] [associations]
symbol:CHURC1-FNTB "Protein CHURC1-FNTB" species:9606 "Homo
sapiens" [GO:0003824 "catalytic activity" evidence=IEA] [GO:0005965
"protein farnesyltransferase complex" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001330
InterPro:IPR009508 InterPro:IPR026872 Pfam:PF00432 Pfam:PF06573
ProDom:PD355092 GO:GO:0007275 GO:GO:0045893 GO:GO:0003824
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008270 GO:GO:0042127
GO:GO:0018343 GO:GO:0005965 PANTHER:PTHR11774:SF6 OMA:HPVYNIC
EMBL:AL139022 EMBL:AL135745 HGNC:HGNC:42960 Ensembl:ENST00000549987
Uniprot:H0YHI0
Length = 472
Score = 119 (46.9 bits), Expect = 0.00031, P = 0.00031
Identities = 55/204 (26%), Positives = 86/204 (42%)
Query: 83 EFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFY 142
+F+ S +G FG GP H TY A+ +L ++ T+ + Y D++
Sbjct: 163 QFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIG-------TEEA-Y-DIINR---- 209
Query: 143 SPQIESLKRWLI-FRQRSG-FQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVL 200
E L ++L +Q G F VD + + S+ N T E +
Sbjct: 210 ----EKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIA 265
Query: 201 DTQHMTGGLSKWSDTQADILHTYLG--EFFVRPRIIKTQIESLKRWLIFRQ---RSGFQG 255
Q+ GG+ +A +T+ G + R ++SL +W+ RQ GFQG
Sbjct: 266 RCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQG 325
Query: 256 RPNKPVDTCYTFWIGASLSILNSA 279
R NK VD CY+FW L +L+ A
Sbjct: 326 RCNKLVDGCYSFWQAGLLPLLHRA 349
>MGI|MGI:1861305 [details] [associations]
symbol:Fntb "farnesyltransferase, CAAX box, beta"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IMP] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0004660 "protein farnesyltransferase activity"
evidence=ISO] [GO:0005875 "microtubule associated complex"
evidence=ISO] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] [GO:0008144 "drug binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO;IMP] [GO:0008285 "negative regulation
of cell proliferation" evidence=IMP] [GO:0010035 "response to
inorganic substance" evidence=ISO] [GO:0014070 "response to organic
cyclic compound" evidence=ISO] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=ISO]
[GO:0019840 "isoprenoid binding" evidence=ISO] [GO:0034097
"response to cytokine stimulus" evidence=ISO] [GO:0042060 "wound
healing" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0042277 "peptide binding"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045787 "positive regulation of cell cycle" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0048146 "positive
regulation of fibroblast proliferation" evidence=IMP] [GO:0051770
"positive regulation of nitric-oxide synthase biosynthetic process"
evidence=ISO] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
MGI:MGI:1861305 GO:GO:0005875 GO:GO:0008285 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008144 GO:GO:0008270
GO:GO:0034097 GO:GO:0014070 GO:GO:0042277 GO:GO:0010035
GO:GO:0042060 GO:GO:0018343 GO:GO:0048146 GO:GO:0045787
GO:GO:0004311 GO:GO:0005965 GO:GO:0004660 PDB:3PZ4 PDBsum:3PZ4
GO:GO:0019840 HOGENOM:HOG000190594 KO:K05954 PANTHER:PTHR11774:SF6
CTD:2342 GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173
OMA:HPVYNIC OrthoDB:EOG4KKZ33 EMBL:BC031417 IPI:IPI00169914
RefSeq:NP_666039.1 UniGene:Mm.151174 ProteinModelPortal:Q8K2I1
SMR:Q8K2I1 STRING:Q8K2I1 PhosphoSite:Q8K2I1 PRIDE:Q8K2I1
Ensembl:ENSMUST00000041008 GeneID:110606 KEGG:mmu:110606
UCSC:uc007nyu.1 InParanoid:Q8K2I1 BindingDB:Q8K2I1
ChEMBL:CHEMBL2631 ChiTaRS:FNTB NextBio:364317 Bgee:Q8K2I1
CleanEx:MM_FNTB Genevestigator:Q8K2I1 GermOnline:ENSMUSG00000033373
Uniprot:Q8K2I1
Length = 437
Score = 117 (46.2 bits), Expect = 0.00045, P = 0.00045
Identities = 53/202 (26%), Positives = 83/202 (41%)
Query: 83 EFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFY 142
+F+ S DG FG GP H TY A+ +L ++ T+ + + + L Y
Sbjct: 128 QFLELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIG-------TEEAYNVINREKLLQY 180
Query: 143 SPQIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDT 202
+ SLK+ F VD + + S+ N T E +
Sbjct: 181 ---LYSLKQ-----PDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARC 232
Query: 203 QHMTGGLSKWSDTQADILHTYLG--EFFVRPRIIKTQIESLKRWLIFRQ---RSGFQGRP 257
Q+ GG+ +A +T+ G + + ++SL +W+ RQ GFQGR
Sbjct: 233 QNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRC 292
Query: 258 NKPVDTCYTFWIGASLSILNSA 279
NK VD CY+FW L +L+ A
Sbjct: 293 NKLVDGCYSFWQAGLLPLLHRA 314
>RGD|620119 [details] [associations]
symbol:Fntb "farnesyltransferase, CAAX box, beta" species:10116
"Rattus norvegicus" [GO:0004311 "farnesyltranstransferase activity"
evidence=IEA;ISO] [GO:0004660 "protein farnesyltransferase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005875 "microtubule associated complex"
evidence=ISO] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] [GO:0008152 "metabolic process" evidence=ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO;IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO] [GO:0010035 "response to inorganic
substance" evidence=IMP] [GO:0014070 "response to organic cyclic
compound" evidence=IMP] [GO:0018343 "protein farnesylation"
evidence=IEA;ISO] [GO:0034097 "response to cytokine stimulus"
evidence=IMP] [GO:0042060 "wound healing" evidence=IEA;ISO]
[GO:0043234 "protein complex" evidence=IDA] [GO:0045787 "positive
regulation of cell cycle" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=IEA;ISO] [GO:0051770 "positive
regulation of nitric-oxide synthase biosynthetic process"
evidence=IMP] [GO:0008144 "drug binding" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=IDA] [GO:0019840 "isoprenoid binding"
evidence=IDA] [GO:0042277 "peptide binding" evidence=IDA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 RGD:620119
GO:GO:0005875 GO:GO:0008285 GO:GO:0043234 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008284 GO:GO:0034097
GO:GO:0014070 GO:GO:0010035 GO:GO:0042060 GO:GO:0018343
GO:GO:0048146 GO:GO:0045787 GO:GO:0051770 eggNOG:COG5029
GO:GO:0004311 GO:GO:0005965 GO:GO:0004660 PDB:1D8D PDB:1D8E
PDB:1FPP PDB:1FT1 PDB:1FT2 PDB:1FTI PDB:1HZ7 PDB:1JCR PDB:1JCS
PDB:1KZO PDB:1KZP PDB:1KZR PDB:1N94 PDB:1N95 PDB:1N9A PDB:1NI1
PDB:1NL4 PDB:1O1R PDB:1O1S PDB:1O1T PDB:1O5M PDB:1QBQ PDB:1QE2
PDB:1SA5 PDB:1TN7 PDB:1TN8 PDB:1X81 PDB:2BED PDB:2FTI PDB:2R2L
PDB:2ZIR PDB:2ZIS PDB:3DPY PDB:3E30 PDB:3E32 PDB:3E33 PDB:3E34
PDB:3EU5 PDB:3EUV PDB:3FTI PDB:3KSL PDB:3KSQ PDB:4GTM PDB:4GTO
PDB:4GTP PDB:4GTQ PDB:4GTR PDBsum:1D8D PDBsum:1D8E PDBsum:1FPP
PDBsum:1FT1 PDBsum:1FT2 PDBsum:1FTI PDBsum:1HZ7 PDBsum:1JCR
PDBsum:1JCS PDBsum:1KZO PDBsum:1KZP PDBsum:1KZR PDBsum:1N94
PDBsum:1N95 PDBsum:1N9A PDBsum:1NI1 PDBsum:1NL4 PDBsum:1O1R
PDBsum:1O1S PDBsum:1O1T PDBsum:1O5M PDBsum:1QBQ PDBsum:1QE2
PDBsum:1SA5 PDBsum:1TN7 PDBsum:1TN8 PDBsum:1X81 PDBsum:2BED
PDBsum:2FTI PDBsum:2R2L PDBsum:2ZIR PDBsum:2ZIS PDBsum:3DPY
PDBsum:3E30 PDBsum:3E32 PDBsum:3E33 PDBsum:3E34 PDBsum:3EU5
PDBsum:3EUV PDBsum:3FTI PDBsum:3KSL PDBsum:3KSQ PDBsum:4GTM
PDBsum:4GTO PDBsum:4GTP PDBsum:4GTQ PDBsum:4GTR
HOGENOM:HOG000190594 KO:K05954 PANTHER:PTHR11774:SF6 CTD:2342
GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173 OMA:HPVYNIC
OrthoDB:EOG4KKZ33 EMBL:M69056 EMBL:BC087675 IPI:IPI00205139
PIR:A40037 RefSeq:NP_742031.1 UniGene:Rn.8873
ProteinModelPortal:Q02293 SMR:Q02293 DIP:DIP-6132N IntAct:Q02293
MINT:MINT-121917 STRING:Q02293 PhosphoSite:Q02293
Ensembl:ENSRNOT00000010588 GeneID:64511 KEGG:rno:64511
UCSC:RGD:620119 InParanoid:Q02293 SABIO-RK:Q02293 BindingDB:Q02293
ChEMBL:CHEMBL4890 EvolutionaryTrace:Q02293 NextBio:613294
Genevestigator:Q02293 GermOnline:ENSRNOG00000007660 Uniprot:Q02293
Length = 437
Score = 117 (46.2 bits), Expect = 0.00045, P = 0.00045
Identities = 53/202 (26%), Positives = 83/202 (41%)
Query: 83 EFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFY 142
+F+ S DG FG GP H TY A+ +L ++ T+ + + + L Y
Sbjct: 128 QFLELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIG-------TEEAYNVINREKLLQY 180
Query: 143 SPQIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDT 202
+ SLK+ F VD + + S+ N T E +
Sbjct: 181 ---LYSLKQ-----PDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARC 232
Query: 203 QHMTGGLSKWSDTQADILHTYLG--EFFVRPRIIKTQIESLKRWLIFRQ---RSGFQGRP 257
Q+ GG+ +A +T+ G + + ++SL +W+ RQ GFQGR
Sbjct: 233 QNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRC 292
Query: 258 NKPVDTCYTFWIGASLSILNSA 279
NK VD CY+FW L +L+ A
Sbjct: 293 NKLVDGCYSFWQAGLLPLLHRA 314
>UNIPROTKB|Q02293 [details] [associations]
symbol:Fntb "Protein farnesyltransferase subunit beta"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
RGD:620119 GO:GO:0005875 GO:GO:0008285 GO:GO:0043234
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008284
GO:GO:0034097 GO:GO:0014070 GO:GO:0010035 GO:GO:0042060
GO:GO:0018343 GO:GO:0048146 GO:GO:0045787 GO:GO:0051770
eggNOG:COG5029 GO:GO:0004311 GO:GO:0005965 GO:GO:0004660 PDB:1D8D
PDB:1D8E PDB:1FPP PDB:1FT1 PDB:1FT2 PDB:1FTI PDB:1HZ7 PDB:1JCR
PDB:1JCS PDB:1KZO PDB:1KZP PDB:1KZR PDB:1N94 PDB:1N95 PDB:1N9A
PDB:1NI1 PDB:1NL4 PDB:1O1R PDB:1O1S PDB:1O1T PDB:1O5M PDB:1QBQ
PDB:1QE2 PDB:1SA5 PDB:1TN7 PDB:1TN8 PDB:1X81 PDB:2BED PDB:2FTI
PDB:2R2L PDB:2ZIR PDB:2ZIS PDB:3DPY PDB:3E30 PDB:3E32 PDB:3E33
PDB:3E34 PDB:3EU5 PDB:3EUV PDB:3FTI PDB:3KSL PDB:3KSQ PDB:4GTM
PDB:4GTO PDB:4GTP PDB:4GTQ PDB:4GTR PDBsum:1D8D PDBsum:1D8E
PDBsum:1FPP PDBsum:1FT1 PDBsum:1FT2 PDBsum:1FTI PDBsum:1HZ7
PDBsum:1JCR PDBsum:1JCS PDBsum:1KZO PDBsum:1KZP PDBsum:1KZR
PDBsum:1N94 PDBsum:1N95 PDBsum:1N9A PDBsum:1NI1 PDBsum:1NL4
PDBsum:1O1R PDBsum:1O1S PDBsum:1O1T PDBsum:1O5M PDBsum:1QBQ
PDBsum:1QE2 PDBsum:1SA5 PDBsum:1TN7 PDBsum:1TN8 PDBsum:1X81
PDBsum:2BED PDBsum:2FTI PDBsum:2R2L PDBsum:2ZIR PDBsum:2ZIS
PDBsum:3DPY PDBsum:3E30 PDBsum:3E32 PDBsum:3E33 PDBsum:3E34
PDBsum:3EU5 PDBsum:3EUV PDBsum:3FTI PDBsum:3KSL PDBsum:3KSQ
PDBsum:4GTM PDBsum:4GTO PDBsum:4GTP PDBsum:4GTQ PDBsum:4GTR
HOGENOM:HOG000190594 KO:K05954 PANTHER:PTHR11774:SF6 CTD:2342
GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173 OMA:HPVYNIC
OrthoDB:EOG4KKZ33 EMBL:M69056 EMBL:BC087675 IPI:IPI00205139
PIR:A40037 RefSeq:NP_742031.1 UniGene:Rn.8873
ProteinModelPortal:Q02293 SMR:Q02293 DIP:DIP-6132N IntAct:Q02293
MINT:MINT-121917 STRING:Q02293 PhosphoSite:Q02293
Ensembl:ENSRNOT00000010588 GeneID:64511 KEGG:rno:64511
UCSC:RGD:620119 InParanoid:Q02293 SABIO-RK:Q02293 BindingDB:Q02293
ChEMBL:CHEMBL4890 EvolutionaryTrace:Q02293 NextBio:613294
Genevestigator:Q02293 GermOnline:ENSRNOG00000007660 Uniprot:Q02293
Length = 437
Score = 117 (46.2 bits), Expect = 0.00045, P = 0.00045
Identities = 53/202 (26%), Positives = 83/202 (41%)
Query: 83 EFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFY 142
+F+ S DG FG GP H TY A+ +L ++ T+ + + + L Y
Sbjct: 128 QFLELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIG-------TEEAYNVINREKLLQY 180
Query: 143 SPQIESLKRWLIFRQRSGFQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVLDT 202
+ SLK+ F VD + + S+ N T E +
Sbjct: 181 ---LYSLKQ-----PDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARC 232
Query: 203 QHMTGGLSKWSDTQADILHTYLG--EFFVRPRIIKTQIESLKRWLIFRQ---RSGFQGRP 257
Q+ GG+ +A +T+ G + + ++SL +W+ RQ GFQGR
Sbjct: 233 QNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRC 292
Query: 258 NKPVDTCYTFWIGASLSILNSA 279
NK VD CY+FW L +L+ A
Sbjct: 293 NKLVDGCYSFWQAGLLPLLHRA 314
>UNIPROTKB|P49355 [details] [associations]
symbol:FNTB "Protein farnesyltransferase subunit beta"
species:9913 "Bos taurus" [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=IEA] [GO:0042060 "wound healing"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IEA] [GO:0004660 "protein farnesyltransferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=IEA]
[GO:0005965 "protein farnesyltransferase complex" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 GO:GO:0008285
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0042060
GO:GO:0018343 GO:GO:0048146 eggNOG:COG5029 GO:GO:0004311
GO:GO:0005965 GO:GO:0004660 HOGENOM:HOG000190594 KO:K05954
PANTHER:PTHR11774:SF6 EMBL:L00633 EMBL:BC123393 IPI:IPI00705098
PIR:C49274 RefSeq:NP_786999.1 UniGene:Bt.4529
ProteinModelPortal:P49355 SMR:P49355 STRING:P49355
Ensembl:ENSBTAT00000007751 GeneID:327686 KEGG:bta:327686 CTD:2342
GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173 InParanoid:P49355
OMA:HPVYNIC OrthoDB:EOG4KKZ33 BindingDB:P49355 ChEMBL:CHEMBL4671
NextBio:20810151 Uniprot:P49355
Length = 437
Score = 116 (45.9 bits), Expect = 0.00059, P = 0.00059
Identities = 54/204 (26%), Positives = 86/204 (42%)
Query: 83 EFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLDLVKSFLFY 142
+F+ S +G FG GP H TY A+ +L ++ T+ + Y D++
Sbjct: 128 QFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIG-------TEEA-Y-DVINR---- 174
Query: 143 SPQIESLKRWLI-FRQRSG-FQGRPNKPVDTCYTFWIGASLSILNAATWIDEERLLLSVL 200
E L ++L +Q G F VD + + S+ N T E +
Sbjct: 175 ----EKLLQYLYSLKQPDGSFLMHDGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIA 230
Query: 201 DTQHMTGGLSKWSDTQADILHTYLG--EFFVRPRIIKTQIESLKRWLIFRQ---RSGFQG 255
Q+ GG+ +A +T+ G + + ++SL +W+ RQ GFQG
Sbjct: 231 RCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQG 290
Query: 256 RPNKPVDTCYTFWIGASLSILNSA 279
R NK VD CY+FW L +L+ A
Sbjct: 291 RCNKLVDGCYSFWQAGLLPLLHRA 314
>UNIPROTKB|F1SA56 [details] [associations]
symbol:CHURC1-FNTB "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0048146 "positive regulation of fibroblast
proliferation" evidence=IEA] [GO:0042060 "wound healing"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IEA] [GO:0018343 "protein farnesylation"
evidence=IEA] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
GO:GO:0008285 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042060
GO:GO:0018343 GO:GO:0048146 GO:GO:0004311 GO:GO:0005965
PANTHER:PTHR11774:SF6 GeneTree:ENSGT00550000075042 OMA:HPVYNIC
EMBL:CU655896 Ensembl:ENSSSCT00000002539 Uniprot:F1SA56
Length = 336
Score = 114 (45.2 bits), Expect = 0.00063, P = 0.00063
Identities = 58/214 (27%), Positives = 92/214 (42%)
Query: 75 GMDRARCLEFIFRSLSYDGAFGQGPCLESHGGSTYCALASLALMNKLDTLRPTQASLYLD 134
G+ + C +F+ S +G FG GP H TY A+ +L ++ T+ + Y D
Sbjct: 20 GLVPSVC-QFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIG-------TEEA-Y-D 69
Query: 135 LVKSFLFYSPQIESLKRWLI-FRQRSG-FQGRPNKPVDTCYTFWIGASLSILNAATWIDE 192
++ E L ++L +Q G F VD + + S+ N T
Sbjct: 70 VINR--------EKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIVTPDLF 121
Query: 193 ERLLLSVLDTQHMTGGLSKWSDTQADILHTYLGEFFVRPRIIKTQ----IESLKRWLIFR 248
E + Q+ GG+ +A +T+ G I+K + ++SL +W+ R
Sbjct: 122 EGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCG--LAALVILKKERCLNLKSLLQWVTSR 179
Query: 249 Q---RSGFQGRPNKPVDTCYTFWIGASLSILNSA 279
Q GFQGR NK VD CY+FW L +L+ A
Sbjct: 180 QMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRA 213
Score = 113 (44.8 bits), Expect = 0.00081, P = 0.00081
Identities = 28/95 (29%), Positives = 50/95 (52%)
Query: 26 LVYRLQISTSLRSFTTPCFSFKCTLADGDCDMRFVFCACSICYILDDWSGMDRARCLEFI 85
++ R ++ L S P SF + G+ D+R +CA S+ + + + E+I
Sbjct: 70 VINREKLLQYLYSLKQPDGSFLMHVG-GEVDVRSAYCAASVASLTNIVTPDLFEGTAEWI 128
Query: 86 FRSLSYDGAFGQGPCLESHGGSTYCALASLALMNK 120
R +++G G P +E+HGG T+C LA+L ++ K
Sbjct: 129 ARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKK 163
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.137 0.434 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 361 344 0.00097 116 3 11 22 0.47 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 65
No. of states in DFA: 623 (66 KB)
Total size of DFA: 251 KB (2130 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.69u 0.14s 27.83t Elapsed: 00:00:02
Total cpu time: 27.71u 0.14s 27.85t Elapsed: 00:00:02
Start: Thu Aug 15 11:23:41 2013 End: Thu Aug 15 11:23:43 2013