Query psy6405
Match_columns 548
No_of_seqs 299 out of 2677
Neff 4.9
Searched_HMMs 29240
Date Fri Aug 16 17:04:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6405.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6405hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gsl_A Disks large homolog 4; 99.9 2.1E-21 7.1E-26 181.0 20.7 167 48-217 3-191 (196)
2 3r0h_A INAD, inactivation-NO-a 99.9 1.8E-20 6.1E-25 177.5 21.3 167 48-217 16-197 (206)
3 2qt5_A Glutamate receptor-inte 99.8 3.2E-19 1.1E-23 168.9 20.2 166 48-217 5-196 (200)
4 1p1d_A PDZ45, glutamate recept 99.8 5.2E-19 1.8E-23 167.4 20.7 166 49-216 5-195 (196)
5 2xkx_A Disks large homolog 4; 99.8 4.1E-18 1.4E-22 191.4 21.8 168 48-218 57-246 (721)
6 1w9e_A Syntenin 1; cell adhesi 99.8 6.2E-17 2.1E-21 149.6 21.0 156 49-213 3-163 (166)
7 3suz_A Amyloid beta A4 precurs 99.7 1.8E-17 6.1E-22 174.0 6.5 163 48-213 202-371 (388)
8 2xkx_A Disks large homolog 4; 99.7 1.4E-15 4.7E-20 170.9 20.5 160 51-217 155-392 (721)
9 3rle_A Golgi reassembly-stacki 99.6 4.6E-15 1.6E-19 142.7 15.5 134 78-216 16-170 (209)
10 4a8c_A Periplasmic PH-dependen 99.6 2E-14 6.8E-19 152.8 16.5 135 78-217 263-421 (436)
11 3pv2_A DEGQ; trypsin fold, PDZ 99.6 2.4E-14 8.1E-19 153.1 14.6 135 78-217 282-444 (451)
12 1ky9_A Protease DO, DEGP, HTRA 99.4 1.1E-13 3.7E-18 147.9 2.1 135 78-217 286-441 (448)
13 2opg_A Multiple PDZ domain pro 99.3 1.3E-11 4.5E-16 104.0 12.5 90 49-140 3-93 (98)
14 2vwr_A Ligand of NUMB protein 99.3 1.3E-11 4.4E-16 103.7 11.7 87 50-138 3-90 (95)
15 2awx_A Synapse associated prot 99.3 1.6E-11 5.4E-16 105.3 11.5 95 49-145 2-101 (105)
16 1d5g_A Human phosphatase HPTP1 99.3 2.9E-11 9.8E-16 101.6 12.2 89 48-138 3-94 (96)
17 2fe5_A Presynaptic protein SAP 99.3 2.5E-11 8.7E-16 101.3 11.8 87 49-137 2-93 (94)
18 1uez_A KIAA1526 protein; PDZ d 99.3 1.1E-11 3.9E-16 105.3 9.6 90 47-138 5-94 (101)
19 2i1n_A Discs, large homolog 3; 99.3 1.9E-11 6.5E-16 103.9 10.7 90 49-140 3-97 (102)
20 2w4f_A Protein LAP4; structura 99.3 2.6E-11 8.9E-16 101.8 11.3 87 50-139 3-95 (97)
21 2iwo_A Multiple PDZ domain pro 99.3 7.1E-12 2.4E-16 110.9 8.2 95 46-142 20-118 (120)
22 2he4_A Na(+)/H(+) exchange reg 99.3 3.3E-11 1.1E-15 100.2 11.8 86 48-138 2-88 (90)
23 2fne_A Multiple PDZ domain pro 99.3 1E-11 3.6E-16 109.4 9.1 96 41-138 16-114 (117)
24 2jik_A Synaptojanin-2 binding 99.3 3.2E-11 1.1E-15 102.4 11.6 88 49-138 6-98 (101)
25 2dls_A PDZ-rhogef, RHO guanine 99.3 3.7E-11 1.3E-15 101.0 11.8 84 47-138 5-88 (93)
26 1um1_A KIAA1849 protein, RSGI 99.3 1.7E-11 5.7E-16 105.8 9.9 99 46-146 4-105 (110)
27 1m5z_A GRIP, AMPA receptor int 99.3 4.3E-11 1.5E-15 99.5 11.9 86 48-136 4-90 (91)
28 2jil_A GRIP1 protein, glutamat 99.3 2.6E-11 8.8E-16 102.0 10.5 88 50-139 3-94 (97)
29 2edz_A PDZ domain-containing p 99.3 6.5E-12 2.2E-16 109.4 6.8 102 39-145 3-105 (114)
30 1uhp_A Hypothetical protein KI 99.3 4.8E-11 1.7E-15 102.6 12.1 88 47-137 5-101 (107)
31 2qg1_A Multiple PDZ domain pro 99.2 4E-11 1.4E-15 99.9 11.2 86 49-137 3-89 (92)
32 1x6d_A Interleukin-16; PDZ dom 99.2 4E-11 1.4E-15 104.9 11.3 94 47-141 12-107 (119)
33 1ihj_A INAD; intermolecular di 99.2 3.9E-11 1.3E-15 101.1 10.5 87 50-137 5-97 (98)
34 2byg_A Channel associated prot 99.2 3.6E-11 1.2E-15 105.9 10.7 89 48-138 22-115 (117)
35 2v90_A PDZ domain-containing p 99.2 2.7E-11 9.1E-16 101.9 9.5 90 50-142 3-94 (96)
36 2jre_A C60-1 PDZ domain peptid 99.2 5.6E-11 1.9E-15 102.0 11.7 92 48-139 10-106 (108)
37 1wha_A KIAA0147 protein, scrib 99.2 3.8E-11 1.3E-15 102.9 10.6 89 48-138 5-99 (105)
38 3cbz_A Dishevelled-2; PDZ doma 99.2 1.8E-11 6.1E-16 106.1 8.5 90 48-138 3-97 (108)
39 2h2b_A Tight junction protein 99.2 5.5E-11 1.9E-15 101.9 11.3 89 48-139 5-99 (107)
40 1x5q_A LAP4 protein; PDZ domai 99.2 7.3E-11 2.5E-15 101.8 11.9 89 48-139 13-107 (110)
41 2ehr_A INAD-like protein; PDZ 99.2 6.9E-11 2.4E-15 103.1 11.8 92 46-138 11-111 (117)
42 2r4h_A Membrane-associated gua 99.2 4.4E-11 1.5E-15 104.1 10.4 88 48-138 22-110 (112)
43 1wi4_A Synip, syntaxin binding 99.2 9.5E-11 3.2E-15 101.9 12.5 88 48-138 13-106 (109)
44 2g5m_B Neurabin-2; spinophilin 99.2 2.8E-11 9.4E-16 104.9 9.0 97 49-147 3-105 (113)
45 2daz_A INAD-like protein; PDZ 99.2 6E-11 2.1E-15 104.9 11.1 91 48-140 23-114 (124)
46 1g9o_A NHE-RF; PDZ domain, com 99.2 6.8E-11 2.3E-15 98.3 10.8 83 50-137 3-87 (91)
47 1wi2_A Riken cDNA 2700099C19; 99.2 6.9E-11 2.3E-15 101.3 11.1 87 49-138 14-100 (104)
48 3gge_A PDZ domain-containing p 99.2 7.1E-11 2.4E-15 102.0 11.1 87 49-140 4-93 (95)
49 1qav_A Alpha-1 syntrophin (res 99.2 5.3E-11 1.8E-15 99.0 10.0 84 49-135 3-88 (90)
50 2o2t_A Multiple PDZ domain pro 99.2 1.5E-11 5.2E-16 107.2 6.9 93 48-141 18-114 (117)
51 2d92_A INAD-like protein; PDZ 99.2 6.1E-11 2.1E-15 102.4 10.5 88 48-137 13-105 (108)
52 1d5g_A Human phosphatase HPTP1 99.2 1.3E-10 4.3E-15 97.6 12.1 91 124-215 2-92 (96)
53 2djt_A Unnamed protein product 99.2 6.1E-11 2.1E-15 101.1 10.3 89 48-138 9-99 (104)
54 3b76_A E3 ubiquitin-protein li 99.2 8.5E-11 2.9E-15 104.1 11.5 89 48-137 22-113 (118)
55 2eno_A Synaptojanin-2-binding 99.2 6.7E-11 2.3E-15 103.8 10.6 93 44-138 11-108 (120)
56 1n7e_A AMPA receptor interacti 99.2 1.2E-10 4.2E-15 98.2 11.8 89 48-139 3-92 (97)
57 2q9v_A Membrane-associated gua 99.2 7.6E-11 2.6E-15 97.8 10.3 84 50-136 2-88 (90)
58 1r6j_A Syntenin 1; PDZ, membra 99.2 7.1E-11 2.4E-15 99.1 10.1 77 49-135 3-80 (82)
59 1kwa_A Hcask/LIN-2 protein; PD 99.2 8E-11 2.7E-15 98.4 10.2 83 51-138 2-86 (88)
60 2koj_A Partitioning defective 99.2 1.3E-10 4.6E-15 100.1 11.9 91 47-139 8-103 (111)
61 2eeh_A PDZ domain-containing p 99.2 1.2E-10 4E-15 99.0 11.2 89 48-139 8-96 (100)
62 2vsp_A PDZ domain-containing p 99.2 2.5E-11 8.6E-16 101.3 6.6 85 49-138 2-87 (91)
63 4e34_A Golgi-associated PDZ an 99.2 7.6E-11 2.6E-15 97.3 9.5 84 49-135 1-86 (87)
64 2uzc_A Human pdlim5, PDZ and L 99.2 1E-10 3.5E-15 96.7 10.1 82 51-137 4-86 (88)
65 2q3g_A PDZ and LIM domain prot 99.2 9E-11 3.1E-15 97.4 9.7 82 52-138 5-87 (89)
66 3o46_A Maguk P55 subfamily mem 99.2 1.4E-10 4.9E-15 97.1 10.9 85 48-136 2-87 (93)
67 3qe1_A Sorting nexin-27, G pro 99.2 1.2E-10 4E-15 99.9 10.5 88 48-138 4-103 (107)
68 1uep_A Membrane associated gua 99.2 5.2E-11 1.8E-15 101.8 8.3 88 48-138 7-97 (103)
69 1rgw_A ZAsp protein; PDZ, cyph 99.2 8.1E-11 2.8E-15 96.5 9.1 82 51-137 2-84 (85)
70 3i4w_A Disks large homolog 4; 99.2 1.2E-10 3.9E-15 99.1 10.3 87 48-138 9-96 (104)
71 2dkr_A LIN-7 homolog B; LIN-7B 99.2 1.1E-10 3.7E-15 97.3 9.9 86 49-137 4-90 (93)
72 4fln_A Protease DO-like 2, chl 99.2 4E-10 1.4E-14 123.3 17.2 141 63-208 253-465 (539)
73 1v62_A KIAA1719 protein; struc 99.2 1.3E-10 4.4E-15 102.0 10.8 90 48-138 13-103 (117)
74 1i16_A Interleukin 16, LCF; cy 99.2 1E-10 3.6E-15 104.5 10.3 93 127-219 29-121 (130)
75 2pkt_A PDZ and LIM domain prot 99.2 1.1E-10 3.8E-15 97.2 9.8 85 51-140 4-89 (91)
76 2d90_A PDZ domain containing p 99.2 7.3E-11 2.5E-15 100.5 8.8 87 48-139 4-91 (102)
77 1nf3_C PAR-6B; semi-CRIB motif 99.2 8.9E-11 3E-15 104.6 9.7 91 48-138 27-126 (128)
78 4amh_A Disks large homolog 1; 99.2 1.4E-10 4.7E-15 100.2 10.6 77 62-138 12-93 (106)
79 1q7x_A PDZ2B domain of PTP-BAS 99.2 1.3E-10 4.4E-15 99.9 10.3 90 48-139 7-104 (108)
80 3axa_A Afadin, nectin-3, prote 99.2 1.7E-10 5.7E-15 98.9 11.0 89 48-139 9-100 (106)
81 1ueq_A Membrane associated gua 99.2 2.3E-10 7.7E-15 101.1 12.1 87 48-137 17-106 (123)
82 1wf8_A Neurabin-I; PDZ domain, 99.2 1.3E-10 4.3E-15 99.9 10.1 89 48-138 7-101 (107)
83 1wf7_A Enigma homologue protei 99.2 5E-11 1.7E-15 101.8 7.5 94 48-146 3-97 (103)
84 1ufx_A KIAA1526 protein; PDZ d 99.2 9.6E-11 3.3E-15 101.0 9.3 86 50-137 6-97 (103)
85 2i04_A Membrane-associated gua 99.2 2E-10 6.9E-15 94.3 10.8 81 52-135 2-85 (85)
86 2pa1_A PDZ and LIM domain prot 99.2 1.8E-10 6.2E-15 95.1 10.4 83 53-138 3-86 (87)
87 1i16_A Interleukin 16, LCF; cy 99.2 1E-10 3.5E-15 104.6 9.6 89 48-138 27-119 (130)
88 3l4f_D SH3 and multiple ankyri 99.2 2.1E-10 7.3E-15 103.1 11.7 88 48-137 25-124 (132)
89 1v6b_A Harmonin isoform A1; st 99.1 9.9E-11 3.4E-15 103.0 9.2 84 49-136 17-106 (118)
90 2dm8_A INAD-like protein; PDZ 99.1 6.8E-11 2.3E-15 102.7 8.0 89 49-139 16-105 (116)
91 2dmz_A INAD-like protein; PDZ 99.1 2E-10 7E-15 101.8 11.2 95 45-140 10-109 (129)
92 2csj_A TJP2 protein; PDZ domai 99.1 1E-10 3.4E-15 102.3 9.0 89 48-139 12-106 (117)
93 1ujd_A KIAA0559 protein; PDZ d 99.1 1.6E-10 5.6E-15 101.2 10.4 90 49-138 11-110 (117)
94 2dlu_A INAD-like protein; PDZ 99.1 1.7E-10 5.8E-15 99.6 10.2 87 48-139 13-100 (111)
95 3r68_A Na(+)/H(+) exchange reg 99.1 1.5E-10 5.2E-15 96.8 9.5 85 49-138 4-89 (95)
96 2f5y_A Regulator of G-protein 99.1 1.9E-10 6.3E-15 96.2 10.0 81 50-138 3-84 (91)
97 2ego_A General receptor for ph 99.1 2.8E-10 9.4E-15 96.0 11.1 85 48-135 2-94 (96)
98 3nfk_A Tyrosine-protein phosph 99.1 1.5E-10 5.3E-15 99.1 9.6 86 48-135 15-106 (107)
99 2db5_A INAD-like protein; PDZ 99.1 1.1E-10 3.8E-15 103.5 9.0 90 48-138 23-116 (128)
100 3ngh_A PDZ domain-containing p 99.1 1.2E-10 4E-15 99.7 8.7 85 51-139 2-87 (106)
101 2eeg_A PDZ and LIM domain prot 99.1 1.8E-10 6.1E-15 96.8 9.6 85 49-138 7-92 (94)
102 1x5n_A Harmonin; PDZ domain, u 99.1 1.8E-10 6.2E-15 99.9 9.9 94 48-144 13-107 (114)
103 1q3o_A Shank1; PDZ, GKAP, pept 99.1 3.4E-10 1.2E-14 97.6 11.6 85 50-136 7-103 (109)
104 2fcf_A Multiple PDZ domain pro 99.1 3.8E-10 1.3E-14 95.8 11.7 89 49-138 3-100 (103)
105 3hpk_A Protein interacting wit 99.1 4.2E-10 1.4E-14 99.4 12.2 87 49-137 18-105 (125)
106 2qkv_A Inactivation-NO-after-p 99.1 2.5E-10 8.5E-15 96.6 10.3 87 45-136 3-90 (96)
107 1qau_A Neuronal nitric oxide s 99.1 5.3E-10 1.8E-14 96.5 12.5 92 51-146 2-96 (112)
108 2dc2_A GOPC, golgi associated 99.1 2.1E-10 7E-15 98.4 9.6 88 48-138 7-96 (103)
109 3bpu_A Membrane-associated gua 99.1 2.4E-10 8.4E-15 94.5 9.6 82 50-138 3-87 (88)
110 2vz5_A TAX1-binding protein 3; 99.1 3E-10 1E-14 103.1 10.9 99 48-147 21-134 (139)
111 2kom_A Partitioning defective 99.1 5.2E-10 1.8E-14 98.8 12.0 90 46-137 26-120 (121)
112 2d92_A INAD-like protein; PDZ 99.1 2.5E-10 8.5E-15 98.6 9.8 91 126-216 14-105 (108)
113 2eei_A PDZ domain-containing p 99.1 1.2E-10 3.9E-15 99.7 7.5 88 47-139 5-93 (106)
114 1ueq_A Membrane associated gua 99.1 9.6E-10 3.3E-14 97.1 13.6 91 126-219 18-109 (123)
115 2awx_A Synapse associated prot 99.1 5.2E-10 1.8E-14 95.8 11.4 94 127-221 3-98 (105)
116 3gge_A PDZ domain-containing p 99.1 4.7E-10 1.6E-14 96.9 11.1 85 125-214 3-88 (95)
117 2i04_A Membrane-associated gua 99.1 6.7E-10 2.3E-14 91.2 11.6 83 129-214 2-85 (85)
118 2iwn_A Multiple PDZ domain pro 99.1 3.3E-10 1.1E-14 94.6 9.9 87 50-138 4-94 (97)
119 3b76_A E3 ubiquitin-protein li 99.1 3.1E-10 1.1E-14 100.4 10.2 91 125-216 22-113 (118)
120 1g9o_A NHE-RF; PDZ domain, com 99.1 6.2E-10 2.1E-14 92.5 11.3 83 127-214 3-85 (91)
121 1tp5_A Presynaptic density pro 99.1 3.5E-10 1.2E-14 98.8 10.2 87 48-138 12-99 (119)
122 2i1n_A Discs, large homolog 3; 99.1 1.2E-09 4.3E-14 92.6 13.3 89 129-218 6-96 (102)
123 1mfg_A ERB-B2 interacting prot 99.1 5.6E-10 1.9E-14 93.6 10.9 81 52-137 5-93 (95)
124 1uew_A Membrane associated gua 99.1 5.4E-10 1.9E-14 97.2 11.2 89 48-138 8-104 (114)
125 1wg6_A Hypothetical protein (r 99.1 1.8E-10 6.2E-15 102.7 8.4 85 53-138 28-123 (127)
126 3khf_A Microtubule-associated 99.1 2.5E-10 8.7E-15 96.4 8.8 83 53-138 5-94 (99)
127 1uit_A Human discs large 5 pro 99.1 4.5E-10 1.6E-14 97.9 10.6 90 49-144 18-108 (117)
128 3egg_C Spinophilin; PP1, serin 99.1 4.5E-10 1.5E-14 105.7 11.3 86 49-136 79-170 (170)
129 1uf1_A KIAA1526 protein; PDZ d 99.1 1.1E-09 3.7E-14 97.1 13.1 98 48-148 18-115 (128)
130 2ejy_A 55 kDa erythrocyte memb 99.1 3.9E-10 1.3E-14 96.9 9.9 82 50-135 12-94 (97)
131 1wfv_A Membrane associated gua 99.1 9.8E-11 3.4E-15 99.3 6.1 89 48-139 9-98 (103)
132 2cs5_A Tyrosine-protein phosph 99.1 2.1E-10 7.2E-15 100.3 8.4 88 48-138 13-107 (119)
133 2eno_A Synaptojanin-2-binding 99.1 1.7E-09 5.9E-14 94.8 13.9 93 127-220 17-111 (120)
134 1wfg_A Regulating synaptic mem 99.1 4.4E-10 1.5E-14 100.8 10.2 79 61-139 46-129 (131)
135 3egg_C Spinophilin; PP1, serin 99.1 5.1E-10 1.8E-14 105.3 11.0 90 125-215 78-170 (170)
136 1q7x_A PDZ2B domain of PTP-BAS 99.1 6.1E-10 2.1E-14 95.7 10.6 92 124-216 6-102 (108)
137 2byg_A Channel associated prot 99.1 1E-09 3.4E-14 96.5 12.1 92 125-217 22-115 (117)
138 2kpk_A Membrane-associated gua 99.1 4.7E-10 1.6E-14 100.0 10.1 87 48-137 16-105 (129)
139 1uju_A Scribble; PDZ domain, c 99.1 1.4E-10 4.7E-15 100.4 6.4 88 49-137 8-104 (111)
140 2la8_A Inactivation-NO-after-p 99.1 4.2E-10 1.4E-14 97.6 9.4 83 50-137 2-85 (106)
141 2jil_A GRIP1 protein, glutamat 99.1 1E-09 3.5E-14 92.2 11.5 90 128-218 4-94 (97)
142 2iwo_A Multiple PDZ domain pro 99.1 3.5E-10 1.2E-14 100.1 8.9 93 125-218 22-115 (120)
143 2jxo_A Ezrin-radixin-moesin-bi 99.1 2.7E-10 9.2E-15 96.1 7.8 85 49-138 8-94 (98)
144 2he4_A Na(+)/H(+) exchange reg 99.1 9.6E-10 3.3E-14 91.3 11.0 83 127-215 4-86 (90)
145 2jik_A Synaptojanin-2 binding 99.1 1.5E-09 5.2E-14 91.9 12.4 89 127-216 7-97 (101)
146 2fne_A Multiple PDZ domain pro 99.1 3E-10 1E-14 100.0 8.3 91 126-217 24-114 (117)
147 1um1_A KIAA1849 protein, RSGI 99.1 9.4E-10 3.2E-14 94.8 11.2 92 125-217 6-97 (110)
148 2kpk_A Membrane-associated gua 99.1 8.1E-10 2.8E-14 98.5 11.0 91 126-219 17-108 (129)
149 2q9v_A Membrane-associated gua 99.1 6.1E-10 2.1E-14 92.3 9.5 85 128-215 3-88 (90)
150 1v5q_A GRIP1 homolog, glutamat 99.1 5.9E-10 2E-14 98.3 10.0 91 49-140 14-110 (122)
151 2opg_A Multiple PDZ domain pro 99.1 1.3E-09 4.5E-14 91.7 11.6 89 126-217 3-91 (98)
152 3k1r_A Harmonin; protein-prote 99.1 4.9E-10 1.7E-14 106.2 10.0 88 48-138 82-169 (192)
153 2kv8_A RGS12, regulator of G-p 99.0 2.1E-10 7.3E-15 93.9 6.5 79 50-136 2-81 (83)
154 1va8_A Maguk P55 subfamily mem 99.0 8.3E-10 2.8E-14 96.1 10.6 85 48-138 23-109 (113)
155 2fe5_A Presynaptic protein SAP 99.0 1.7E-09 5.9E-14 90.1 11.8 88 127-215 3-92 (94)
156 2db5_A INAD-like protein; PDZ 99.0 7.3E-10 2.5E-14 98.3 10.1 93 124-217 22-116 (128)
157 3o46_A Maguk P55 subfamily mem 99.0 1.8E-09 6.1E-14 90.3 11.9 84 127-215 4-87 (93)
158 2g5m_B Neurabin-2; spinophilin 99.0 1.1E-09 3.8E-14 94.8 10.9 91 128-219 5-98 (113)
159 1wf8_A Neurabin-I; PDZ domain, 99.0 1.4E-09 4.9E-14 93.3 11.5 89 128-217 10-101 (107)
160 3sfj_A TAX1-binding protein 3; 99.0 7.3E-10 2.5E-14 94.2 9.6 83 53-136 7-104 (104)
161 1r6j_A Syntenin 1; PDZ, membra 99.0 9.5E-10 3.2E-14 92.2 10.1 76 127-214 4-80 (82)
162 1b8q_A Protein (neuronal nitri 99.0 5.8E-10 2E-14 98.6 9.3 95 48-146 6-103 (127)
163 3cbz_A Dishevelled-2; PDZ doma 99.0 1E-09 3.6E-14 94.9 10.6 90 127-217 5-97 (108)
164 2koj_A Partitioning defective 99.0 3.5E-09 1.2E-13 91.2 13.7 91 127-217 11-102 (111)
165 3axa_A Afadin, nectin-3, prote 99.0 1.3E-09 4.4E-14 93.3 10.9 90 127-218 11-100 (106)
166 1wi4_A Synip, syntaxin binding 99.0 1.1E-09 3.8E-14 95.1 10.5 86 129-216 17-105 (109)
167 3i4w_A Disks large homolog 4; 99.0 2E-09 6.8E-14 91.4 11.5 87 125-216 9-95 (104)
168 1uep_A Membrane associated gua 99.0 9E-10 3.1E-14 94.1 9.4 85 129-216 11-96 (103)
169 1ufx_A KIAA1526 protein; PDZ d 99.0 1E-09 3.5E-14 94.6 9.8 86 128-215 7-96 (103)
170 2iwq_A Multiple PDZ domain pro 99.0 1.6E-09 5.4E-14 96.3 11.3 90 48-138 22-120 (123)
171 2dlu_A INAD-like protein; PDZ 99.0 2.3E-09 7.8E-14 92.5 11.8 86 127-218 15-100 (111)
172 1n7t_A 99-MER peptide of densi 99.0 7.7E-10 2.6E-14 94.2 8.6 84 49-137 10-101 (103)
173 2dkr_A LIN-7 homolog B; LIN-7B 99.0 2.7E-09 9.4E-14 88.7 11.7 86 126-215 4-89 (93)
174 2uzc_A Human pdlim5, PDZ and L 99.0 1.4E-09 4.7E-14 89.8 9.8 84 127-216 3-86 (88)
175 2yt7_A Amyloid beta A4 precurs 99.0 1.9E-09 6.4E-14 92.0 10.8 88 48-136 7-98 (101)
176 2e7k_A Maguk P55 subfamily mem 99.0 1E-09 3.4E-14 92.2 8.9 83 48-136 4-87 (91)
177 3r68_A Na(+)/H(+) exchange reg 99.0 1.7E-09 5.8E-14 90.4 10.2 85 125-215 3-87 (95)
178 3tsv_A Tight junction protein 99.0 1.5E-09 5E-14 96.7 10.3 85 49-140 28-115 (124)
179 1uhp_A Hypothetical protein KI 99.0 4E-09 1.4E-13 90.5 12.8 89 127-217 8-102 (107)
180 2vsp_A PDZ domain-containing p 99.0 6.5E-10 2.2E-14 92.7 7.6 84 127-216 3-86 (91)
181 2qg1_A Multiple PDZ domain pro 99.0 3.3E-09 1.1E-13 88.3 11.8 85 127-216 4-89 (92)
182 2kom_A Partitioning defective 99.0 3.3E-09 1.1E-13 93.6 12.5 90 126-215 29-119 (121)
183 2edp_A Fragment, shroom family 99.0 8.7E-10 3E-14 93.9 8.5 87 48-138 7-95 (100)
184 1vb7_A PDZ and LIM domain 2; P 99.0 4E-10 1.4E-14 94.7 6.2 83 54-139 8-91 (94)
185 1kwa_A Hcask/LIN-2 protein; PD 99.0 2.2E-09 7.6E-14 89.6 10.7 80 129-215 3-84 (88)
186 1wha_A KIAA0147 protein, scrib 99.0 1.1E-09 3.8E-14 93.7 9.1 90 127-217 7-99 (105)
187 2v90_A PDZ domain-containing p 99.0 3E-09 1E-13 89.3 11.6 89 127-218 3-91 (96)
188 2kjd_A Sodium/hydrogen exchang 99.0 6.1E-10 2.1E-14 98.3 7.4 94 48-146 7-104 (128)
189 2r4h_A Membrane-associated gua 99.0 2.3E-09 7.7E-14 93.2 10.9 89 124-216 21-109 (112)
190 1n7e_A AMPA receptor interacti 99.0 5.1E-09 1.8E-13 88.2 12.7 86 128-217 6-91 (97)
191 2vwr_A Ligand of NUMB protein 99.0 4.6E-09 1.6E-13 88.0 12.3 85 128-217 4-90 (95)
192 1um7_A Synapse-associated prot 99.0 7.4E-10 2.5E-14 95.4 7.3 87 48-138 13-100 (113)
193 2edv_A FERM and PDZ domain-con 99.0 4.6E-10 1.6E-14 95.1 5.8 83 48-137 6-89 (96)
194 2d8i_A T-cell lymphoma invasio 99.0 1.2E-09 4E-14 96.5 8.6 89 48-138 13-102 (114)
195 2gzv_A PRKCA-binding protein; 99.0 3.1E-09 1.1E-13 93.1 11.3 86 48-135 22-108 (114)
196 3kzd_A TIAM-1, T-lymphoma inva 99.0 2.2E-09 7.6E-14 92.3 10.1 85 49-135 5-90 (94)
197 1ihj_A INAD; intermolecular di 99.0 2.1E-09 7.3E-14 90.4 9.7 86 129-215 7-96 (98)
198 3cyy_A Tight junction protein 99.0 2.9E-09 9.7E-14 88.3 10.4 87 51-144 3-90 (92)
199 1wh1_A KIAA1095 protein; PDZ d 99.0 1.9E-09 6.4E-14 95.4 9.8 99 48-146 17-116 (124)
200 2pa1_A PDZ and LIM domain prot 99.0 3.2E-09 1.1E-13 87.6 10.5 83 130-217 3-86 (87)
201 2vsv_A Rhophilin-2; scaffold p 99.0 2.3E-09 7.7E-14 94.0 10.0 80 50-137 23-104 (109)
202 2vsv_A Rhophilin-2; scaffold p 99.0 3.4E-09 1.2E-13 92.9 11.1 85 125-217 21-105 (109)
203 2o2t_A Multiple PDZ domain pro 99.0 1.4E-09 4.9E-14 94.6 8.6 92 125-217 18-111 (117)
204 3tsz_A Tight junction protein 99.0 1.6E-09 5.4E-14 114.1 10.6 125 49-185 8-136 (391)
205 3qe1_A Sorting nexin-27, G pro 99.0 8.2E-09 2.8E-13 88.3 13.1 90 126-217 5-103 (107)
206 2f5y_A Regulator of G-protein 99.0 4.3E-09 1.5E-13 87.8 11.0 81 128-217 4-84 (91)
207 1qav_A Alpha-1 syntrophin (res 99.0 2.5E-09 8.4E-14 88.8 9.5 85 126-215 3-89 (90)
208 1ujd_A KIAA0559 protein; PDZ d 99.0 1.8E-09 6.2E-14 94.5 9.0 90 128-218 13-111 (117)
209 1m5z_A GRIP, AMPA receptor int 99.0 4.9E-09 1.7E-13 87.0 11.1 83 127-215 6-90 (91)
210 2jxo_A Ezrin-radixin-moesin-bi 99.0 3E-09 1E-13 89.6 9.9 84 127-215 9-92 (98)
211 1uew_A Membrane associated gua 98.9 6.4E-09 2.2E-13 90.4 12.2 96 127-224 10-111 (114)
212 4e34_A Golgi-associated PDZ an 98.9 3.2E-09 1.1E-13 87.5 9.7 84 126-214 1-86 (87)
213 1wfg_A Regulating synaptic mem 98.9 2.5E-09 8.4E-14 95.9 9.7 80 137-216 47-127 (131)
214 2djt_A Unnamed protein product 98.9 5E-09 1.7E-13 89.2 11.0 90 126-217 10-99 (104)
215 2w4f_A Protein LAP4; structura 98.9 7.7E-09 2.6E-13 86.6 12.0 88 128-217 4-94 (97)
216 2dm8_A INAD-like protein; PDZ 98.9 3.9E-09 1.3E-13 91.6 10.4 91 124-217 14-104 (116)
217 2jre_A C60-1 PDZ domain peptid 98.9 6.3E-09 2.1E-13 89.2 11.5 89 128-217 13-105 (108)
218 3e17_A Tight junction protein 98.9 3.2E-09 1.1E-13 88.6 9.4 76 53-135 3-79 (88)
219 3soe_A Membrane-associated gua 98.9 3.6E-09 1.2E-13 93.9 10.1 83 49-140 11-96 (113)
220 3r0h_A INAD, inactivation-NO-a 98.9 5.8E-09 2E-13 98.3 12.2 93 123-216 14-108 (206)
221 2daz_A INAD-like protein; PDZ 98.9 4.2E-09 1.4E-13 93.0 10.4 90 125-217 23-112 (124)
222 2qbw_A PDZ-fibronectin fusion 98.9 4.1E-09 1.4E-13 98.7 11.0 82 63-146 2-94 (195)
223 3shw_A Tight junction protein 98.9 1.8E-09 6E-14 116.5 9.6 123 51-185 2-128 (468)
224 2csj_A TJP2 protein; PDZ domai 98.9 5.3E-09 1.8E-13 91.3 10.9 89 128-219 15-107 (117)
225 1z87_A Alpha-1-syntrophin; pro 98.9 1.3E-09 4.3E-14 109.6 7.8 87 49-138 76-164 (263)
226 2yuy_A RHO GTPase activating p 98.9 3.7E-10 1.2E-14 100.2 3.5 90 46-138 4-121 (126)
227 1rgw_A ZAsp protein; PDZ, cyph 98.9 4E-09 1.4E-13 86.3 9.3 81 129-215 3-83 (85)
228 3l4f_D SH3 and multiple ankyri 98.9 6.3E-09 2.2E-13 93.5 11.3 89 126-216 26-124 (132)
229 4amh_A Disks large homolog 1; 98.9 5.7E-09 1.9E-13 90.0 10.5 81 135-216 10-92 (106)
230 2dls_A PDZ-rhogef, RHO guanine 98.9 8.6E-09 2.9E-13 86.4 11.4 81 126-216 7-87 (93)
231 1ujv_A Membrane associated gua 98.9 6E-09 2.1E-13 88.4 10.4 82 48-138 8-92 (96)
232 2eaq_A LIM domain only protein 98.9 4.1E-09 1.4E-13 87.3 9.2 80 53-137 6-89 (90)
233 2ehr_A INAD-like protein; PDZ 98.9 6.4E-09 2.2E-13 90.6 10.9 91 126-217 14-111 (117)
234 3bpu_A Membrane-associated gua 98.9 4.6E-09 1.6E-13 86.8 9.4 83 127-216 3-86 (88)
235 1wi2_A Riken cDNA 2700099C19; 98.9 1.3E-08 4.4E-13 87.1 12.5 84 126-215 14-98 (104)
236 2ego_A General receptor for ph 98.9 7.5E-09 2.6E-13 87.1 10.8 87 126-214 3-94 (96)
237 1wif_A RSGI RUH-020, riken cDN 98.9 3.2E-09 1.1E-13 95.6 9.0 83 48-136 25-110 (126)
238 1x6d_A Interleukin-16; PDZ dom 98.9 1.4E-08 4.8E-13 88.7 12.8 88 129-218 17-105 (119)
239 2kv8_A RGS12, regulator of G-p 98.9 1.5E-09 5.3E-14 88.7 6.2 79 128-215 3-81 (83)
240 1wf7_A Enigma homologue protei 98.9 5.1E-09 1.7E-13 89.3 9.6 90 125-220 3-92 (103)
241 1v62_A KIAA1719 protein; struc 98.9 1E-08 3.6E-13 89.8 11.7 91 126-219 14-105 (117)
242 3gsl_A Disks large homolog 4; 98.9 1.1E-08 3.6E-13 94.9 12.4 88 128-216 6-95 (196)
243 1v5l_A PDZ and LIM domain 3; a 98.9 7.1E-10 2.4E-14 94.8 4.0 86 50-140 5-91 (103)
244 1whd_A RGS3, regulator of G-pr 98.9 1.7E-09 5.9E-14 92.0 6.0 81 49-137 14-95 (100)
245 1x5q_A LAP4 protein; PDZ domai 98.9 1.6E-08 5.4E-13 87.0 12.2 89 127-217 15-106 (110)
246 2iwn_A Multiple PDZ domain pro 98.9 1.7E-08 5.9E-13 84.0 12.0 88 128-216 5-93 (97)
247 1y7n_A Amyloid beta A4 precurs 98.9 9.5E-09 3.3E-13 86.6 10.5 78 49-135 10-88 (90)
248 3ngh_A PDZ domain-containing p 98.9 1E-08 3.5E-13 87.5 10.8 84 128-217 2-86 (106)
249 2d90_A PDZ domain containing p 98.9 8.3E-09 2.8E-13 87.7 10.0 85 126-216 5-89 (102)
250 2cs5_A Tyrosine-protein phosph 98.9 5.1E-09 1.7E-13 91.5 8.8 88 126-217 14-107 (119)
251 2dc2_A GOPC, golgi associated 98.9 5.9E-09 2E-13 89.3 9.0 85 126-215 8-94 (103)
252 3soe_A Membrane-associated gua 98.9 9.2E-09 3.2E-13 91.3 10.3 84 125-217 10-94 (113)
253 2dmz_A INAD-like protein; PDZ 98.9 2E-08 6.7E-13 89.0 12.4 90 128-218 16-108 (129)
254 3hpk_A Protein interacting wit 98.9 1.5E-08 5.1E-13 89.4 11.5 84 128-215 20-104 (125)
255 2eeg_A PDZ and LIM domain prot 98.9 1.2E-08 4E-13 85.6 10.3 84 127-216 8-91 (94)
256 2eei_A PDZ domain-containing p 98.9 9.5E-09 3.3E-13 87.7 9.9 86 126-217 7-92 (106)
257 3nfk_A Tyrosine-protein phosph 98.9 8.1E-09 2.8E-13 88.3 9.3 86 126-214 16-106 (107)
258 3sfj_A TAX1-binding protein 3; 98.9 1.4E-08 4.9E-13 86.2 10.7 75 139-214 20-103 (104)
259 2pkt_A PDZ and LIM domain prot 98.9 1.2E-08 4.1E-13 84.8 10.0 83 129-217 5-87 (91)
260 1tp5_A Presynaptic density pro 98.8 1.4E-08 4.8E-13 88.6 10.8 86 126-216 13-98 (119)
261 3tsv_A Tight junction protein 98.8 2.1E-08 7.2E-13 89.2 11.9 86 126-217 27-113 (124)
262 2ejy_A 55 kDa erythrocyte memb 98.8 1.3E-08 4.6E-13 87.3 10.2 81 128-214 13-94 (97)
263 1mfg_A ERB-B2 interacting prot 98.8 2.3E-08 7.7E-13 83.8 11.4 83 129-215 5-92 (95)
264 2h2b_A Tight junction protein 98.8 3.3E-08 1.1E-12 84.5 12.7 88 128-218 8-99 (107)
265 2fcf_A Multiple PDZ domain pro 98.8 2.6E-08 8.7E-13 84.5 11.8 89 127-216 4-99 (103)
266 2q3g_A PDZ and LIM domain prot 98.8 9.5E-09 3.3E-13 85.1 8.9 82 129-216 5-86 (89)
267 3khf_A Microtubule-associated 98.8 1.3E-08 4.4E-13 85.9 9.6 87 129-217 4-94 (99)
268 1wg6_A Hypothetical protein (r 98.8 3.9E-09 1.3E-13 94.1 6.4 83 135-217 34-123 (127)
269 1uju_A Scribble; PDZ domain, c 98.8 5.4E-09 1.8E-13 90.3 7.1 89 128-217 10-105 (111)
270 1v5q_A GRIP1 homolog, glutamat 98.8 6E-08 2.1E-12 85.4 13.8 90 128-217 16-108 (122)
271 1va8_A Maguk P55 subfamily mem 98.8 3.8E-08 1.3E-12 85.6 11.7 83 127-217 25-109 (113)
272 1q3o_A Shank1; PDZ, GKAP, pept 98.8 4E-08 1.4E-12 84.5 11.6 87 128-216 8-104 (109)
273 2eeh_A PDZ domain-containing p 98.8 4.4E-08 1.5E-12 83.0 11.7 83 129-217 12-95 (100)
274 1qau_A Neuronal nitric oxide s 98.8 5.2E-08 1.8E-12 83.9 12.3 86 129-219 3-90 (112)
275 1v6b_A Harmonin isoform A1; st 98.8 2.3E-08 7.8E-13 87.9 10.1 82 131-215 22-106 (118)
276 1nf3_C PAR-6B; semi-CRIB motif 98.8 2.2E-08 7.6E-13 89.0 10.0 91 125-216 27-125 (128)
277 2iwq_A Multiple PDZ domain pro 98.8 4.9E-08 1.7E-12 86.6 12.1 90 126-216 23-119 (123)
278 1wfv_A Membrane associated gua 98.8 8.8E-09 3E-13 87.2 7.0 86 127-216 11-96 (103)
279 2yt7_A Amyloid beta A4 precurs 98.8 4.5E-08 1.5E-12 83.4 11.4 89 126-215 8-98 (101)
280 1n7t_A 99-MER peptide of densi 98.8 2.8E-08 9.7E-13 84.5 10.0 86 126-215 10-100 (103)
281 2kjd_A Sodium/hydrogen exchang 98.8 3E-08 1E-12 87.4 10.5 88 126-218 8-95 (128)
282 1uf1_A KIAA1526 protein; PDZ d 98.8 2.6E-08 9E-13 88.1 10.1 91 125-221 18-109 (128)
283 1uit_A Human discs large 5 pro 98.8 3.9E-08 1.3E-12 85.6 11.0 87 127-220 19-105 (117)
284 2z17_A Pleckstrin homology SEC 98.8 2.2E-08 7.7E-13 85.4 9.3 82 49-132 14-102 (104)
285 1vb7_A PDZ and LIM domain 2; P 98.8 1.4E-08 4.9E-13 85.1 7.7 85 128-217 5-90 (94)
286 3e17_A Tight junction protein 98.8 2.4E-08 8.4E-13 83.2 9.0 76 130-215 3-80 (88)
287 2vz5_A TAX1-binding protein 3; 98.8 4.4E-08 1.5E-12 88.8 11.4 91 128-219 24-127 (139)
288 1fc6_A Photosystem II D1 prote 98.8 2.3E-08 8E-13 104.4 10.7 180 33-222 45-240 (388)
289 2qkv_A Inactivation-NO-after-p 98.8 3.3E-08 1.1E-12 83.5 9.6 82 127-215 8-90 (96)
290 2rcz_A Tight junction protein 98.8 4.5E-08 1.5E-12 78.7 10.0 75 55-137 6-81 (81)
291 2lob_A Golgi-associated PDZ an 98.2 9.5E-10 3.2E-14 96.4 0.0 82 49-133 26-109 (112)
292 2gzv_A PRKCA-binding protein; 98.7 9.4E-08 3.2E-12 83.7 12.7 87 124-214 21-108 (114)
293 2la8_A Inactivation-NO-after-p 98.7 2.5E-08 8.4E-13 86.4 8.8 80 129-215 4-84 (106)
294 1vae_A Rhophilin 2, rhophilin, 98.7 1.9E-08 6.5E-13 88.0 8.0 84 127-218 15-98 (111)
295 1ujv_A Membrane associated gua 98.7 6.3E-08 2.2E-12 82.1 10.9 83 125-216 8-91 (96)
296 1whd_A RGS3, regulator of G-pr 98.7 2E-08 7E-13 85.3 7.9 80 128-216 16-95 (100)
297 2krg_A Na(+)/H(+) exchange reg 98.7 3.9E-09 1.3E-13 103.0 3.8 94 48-146 7-104 (216)
298 1um7_A Synapse-associated prot 98.7 1.7E-08 6E-13 86.7 7.2 86 126-216 14-99 (113)
299 2yub_A LIMK-2, LIM domain kina 98.7 2.4E-08 8.2E-13 88.4 8.0 67 77-144 43-112 (118)
300 2e7k_A Maguk P55 subfamily mem 98.7 6.1E-08 2.1E-12 81.3 9.5 81 127-215 6-87 (91)
301 2edz_A PDZ domain-containing p 98.7 5.9E-08 2E-12 84.3 9.6 85 127-217 13-98 (114)
302 3kzd_A TIAM-1, T-lymphoma inva 98.7 9.3E-08 3.2E-12 82.2 10.6 82 128-215 7-91 (94)
303 1vae_A Rhophilin 2, rhophilin, 98.7 9.3E-09 3.2E-13 90.0 4.2 80 49-136 14-95 (111)
304 1uez_A KIAA1526 protein; PDZ d 98.7 5.7E-08 1.9E-12 82.3 8.8 86 126-217 7-94 (101)
305 1wif_A RSGI RUH-020, riken cDN 98.7 1.7E-08 5.8E-13 90.8 5.9 83 127-215 27-110 (126)
306 1z87_A Alpha-1-syntrophin; pro 98.7 3.9E-08 1.3E-12 98.8 8.9 89 126-219 76-166 (263)
307 3k1r_A Harmonin; protein-prote 98.7 4.3E-08 1.5E-12 92.8 8.7 85 127-217 84-169 (192)
308 2z17_A Pleckstrin homology SEC 98.7 9.1E-08 3.1E-12 81.6 9.8 84 127-212 15-103 (104)
309 2yuy_A RHO GTPase activating p 98.7 2.1E-08 7.1E-13 88.8 5.8 89 126-216 7-120 (126)
310 3cyy_A Tight junction protein 98.7 1.7E-07 5.8E-12 77.5 10.8 82 127-218 2-85 (92)
311 1v5l_A PDZ and LIM domain 3; a 98.6 2.9E-08 9.9E-13 84.7 6.1 86 126-217 4-89 (103)
312 3qik_A Phosphatidylinositol 3, 98.6 6.7E-08 2.3E-12 84.3 8.3 76 52-134 19-98 (101)
313 3i18_A LMO2051 protein; alpha- 98.6 8.7E-08 3E-12 81.7 8.8 69 77-147 6-75 (100)
314 1b8q_A Protein (neuronal nitri 98.6 6.3E-08 2.1E-12 85.5 8.2 88 127-219 8-97 (127)
315 2i6v_A General secretion pathw 98.6 4.8E-08 1.6E-12 81.1 6.6 80 64-145 6-86 (87)
316 2l97_A HTRA, putative serine p 98.6 1E-07 3.5E-12 85.7 9.3 70 77-148 56-126 (134)
317 2edv_A FERM and PDZ domain-con 98.6 3.4E-08 1.2E-12 83.5 5.7 79 128-216 9-89 (96)
318 2eaq_A LIM domain only protein 98.6 1.7E-07 5.9E-12 77.4 9.5 80 129-215 5-88 (90)
319 1x5n_A Harmonin; PDZ domain, u 98.6 1.7E-07 5.9E-12 81.0 9.7 84 126-215 14-98 (114)
320 3qik_A Phosphatidylinositol 3, 98.6 2E-07 6.7E-12 81.4 9.7 79 129-214 19-99 (101)
321 2zpm_A Regulator of sigma E pr 98.6 7.5E-08 2.6E-12 79.8 6.8 67 79-146 5-71 (91)
322 2edp_A Fragment, shroom family 98.6 1E-07 3.5E-12 81.0 7.3 86 126-217 8-95 (100)
323 2kl1_A YLBL protein; structure 98.6 9.5E-08 3.3E-12 80.8 7.0 68 78-147 5-73 (94)
324 2kjp_A Uncharacterized protein 98.6 2.5E-08 8.6E-13 84.3 3.3 68 79-148 2-70 (91)
325 2qt5_A Glutamate receptor-inte 98.6 4.1E-07 1.4E-11 85.7 11.7 83 129-216 9-93 (200)
326 1p1d_A PDZ45, glutamate recept 98.5 2.9E-07 1E-11 86.7 10.5 91 127-217 6-99 (196)
327 1y7n_A Amyloid beta A4 precurs 98.5 3.8E-07 1.3E-11 76.7 9.8 75 128-214 12-88 (90)
328 2pzd_A Serine protease HTRA2; 98.5 2.9E-07 1E-11 79.4 9.1 67 78-147 35-101 (113)
329 2d8i_A T-cell lymphoma invasio 98.5 6.6E-08 2.3E-12 85.2 4.9 84 127-216 15-101 (114)
330 1wh1_A KIAA1095 protein; PDZ d 98.5 2.9E-07 1E-11 81.2 8.9 88 131-221 23-112 (124)
331 2p3w_A Probable serine proteas 98.5 2.9E-07 9.8E-12 79.5 8.6 67 77-146 34-100 (112)
332 3id1_A Regulator of sigma E pr 98.5 3.3E-07 1.1E-11 77.7 8.6 66 80-146 4-72 (95)
333 2i4s_A General secretion pathw 98.5 2.4E-07 8.1E-12 79.6 7.7 66 79-145 38-104 (105)
334 3tsz_A Tight junction protein 98.5 4.1E-07 1.4E-11 95.7 10.8 84 128-217 9-93 (391)
335 2qbw_A PDZ-fibronectin fusion 98.5 5.7E-07 2E-11 84.1 10.6 74 138-214 2-80 (195)
336 2lob_A Golgi-associated PDZ an 97.8 2E-08 6.8E-13 87.9 0.0 82 127-213 27-110 (112)
337 2krg_A Na(+)/H(+) exchange reg 98.5 3E-07 1E-11 89.6 8.2 87 125-217 7-94 (216)
338 1w9e_A Syntenin 1; cell adhesi 98.4 9.9E-07 3.4E-11 81.1 11.0 82 127-215 4-86 (166)
339 2rcz_A Tight junction protein 98.4 7.6E-07 2.6E-11 71.4 8.7 68 138-215 13-80 (81)
340 1y8t_A Hypothetical protein RV 98.4 5.7E-07 1.9E-11 91.3 9.5 83 62-147 228-312 (324)
341 3shw_A Tight junction protein 98.4 7.7E-07 2.6E-11 96.0 10.3 81 129-216 3-84 (468)
342 4fgm_A Aminopeptidase N family 98.4 6E-07 2.1E-11 99.3 9.1 82 63-149 485-566 (597)
343 2yub_A LIMK-2, LIM domain kina 98.4 1.3E-06 4.4E-11 77.2 9.5 62 155-218 44-107 (118)
344 3k50_A Putative S41 protease; 98.4 1.1E-06 3.7E-11 93.1 10.2 75 62-139 73-148 (403)
345 3suz_A Amyloid beta A4 precurs 98.3 5.6E-07 1.9E-11 94.4 7.1 91 126-217 203-295 (388)
346 3stj_A Protease DEGQ; serine p 98.3 9.5E-07 3.3E-11 91.3 7.9 70 78-148 263-333 (345)
347 3qo6_A Protease DO-like 1, chl 98.3 8.6E-07 3E-11 91.3 7.1 69 78-147 251-331 (348)
348 1te0_A Protease DEGS; two doma 98.2 1.8E-06 6.2E-11 87.6 8.4 69 78-147 244-313 (318)
349 3rle_A Golgi reassembly-stacki 98.2 6.5E-06 2.2E-10 78.9 11.3 96 50-147 79-182 (209)
350 2hga_A Conserved protein MTH13 98.2 3.3E-06 1.1E-10 75.4 7.5 64 78-145 25-89 (125)
351 1lcy_A HTRA2 serine protease; 98.1 6.8E-06 2.3E-10 83.8 8.8 66 78-146 256-321 (325)
352 2kjp_A Uncharacterized protein 98.0 1.6E-06 5.6E-11 73.1 2.7 62 156-221 2-64 (91)
353 2zpm_A Regulator of sigma E pr 98.0 6.1E-06 2.1E-10 68.2 5.6 59 157-218 6-64 (91)
354 3id1_A Regulator of sigma E pr 98.0 9.1E-06 3.1E-10 68.7 6.5 57 157-216 4-61 (95)
355 2l97_A HTRA, putative serine p 97.9 9.1E-06 3.1E-10 72.9 5.8 59 156-218 58-117 (134)
356 2kl1_A YLBL protein; structure 97.9 6.1E-06 2.1E-10 69.6 4.2 61 155-219 5-66 (94)
357 2i6v_A General secretion pathw 97.9 9.3E-06 3.2E-10 67.2 5.1 59 156-217 20-79 (87)
358 2pzd_A Serine protease HTRA2; 97.9 1.4E-05 4.7E-10 68.9 6.1 60 155-219 35-94 (113)
359 3i18_A LMO2051 protein; alpha- 97.9 1.5E-05 5.2E-10 67.7 6.2 61 155-219 7-68 (100)
360 1fc6_A Photosystem II D1 prote 97.9 2.2E-05 7.6E-10 81.9 8.8 74 139-217 86-160 (388)
361 4a8c_A Periplasmic PH-dependen 97.9 2.7E-05 9.2E-10 82.7 8.7 68 78-147 363-430 (436)
362 3pv2_A DEGQ; trypsin fold, PDZ 97.8 2.4E-05 8.3E-10 83.6 8.0 65 78-144 386-450 (451)
363 1k32_A Tricorn protease; prote 97.8 1.3E-05 4.3E-10 92.0 5.9 81 61-146 735-825 (1045)
364 2i4s_A General secretion pathw 97.8 4E-05 1.4E-09 65.6 7.1 59 156-217 38-97 (105)
365 3num_A Serine protease HTRA1; 97.8 3.1E-06 1E-10 86.4 0.0 68 78-148 254-321 (332)
366 2p3w_A Probable serine proteas 97.7 4.6E-05 1.6E-09 65.6 6.4 59 155-218 35-93 (112)
367 3k50_A Putative S41 protease; 97.5 5.3E-05 1.8E-09 80.2 4.8 75 137-217 73-147 (403)
368 1te0_A Protease DEGS; two doma 97.5 0.00013 4.5E-09 73.9 6.5 61 155-218 244-305 (318)
369 1y8t_A Hypothetical protein RV 97.5 0.00023 8E-09 72.0 8.2 60 155-217 242-303 (324)
370 3stj_A Protease DEGQ; serine p 97.4 0.00015 5E-09 74.9 6.4 62 155-219 263-325 (345)
371 2hga_A Conserved protein MTH13 97.3 0.00025 8.6E-09 63.2 6.1 57 156-217 26-83 (125)
372 3qo6_A Protease DO-like 1, chl 97.3 0.00023 7.9E-09 73.1 6.7 64 153-219 249-324 (348)
373 1lcy_A HTRA2 serine protease; 97.3 0.00022 7.4E-09 72.7 5.4 60 155-219 256-315 (325)
374 4fgm_A Aminopeptidase N family 97.2 0.00027 9.2E-09 78.3 6.3 62 156-221 497-559 (597)
375 1ky9_A Protease DO, DEGP, HTRA 97.2 5.7E-05 1.9E-09 80.7 0.0 65 78-144 383-447 (448)
376 3num_A Serine protease HTRA1; 96.9 0.00014 4.7E-09 74.2 0.0 62 155-221 254-315 (332)
377 1k32_A Tricorn protease; prote 96.1 0.0079 2.7E-07 69.0 7.6 58 156-216 749-815 (1045)
378 4fln_A Protease DO-like 2, chl 93.8 0.081 2.8E-06 58.0 6.9 43 78-121 415-457 (539)
379 3dor_A Protein CT_858, CPAF; m 32.5 37 0.0013 37.6 4.6 44 63-114 84-127 (583)
No 1
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.88 E-value=2.1e-21 Score=180.96 Aligned_cols=167 Identities=33% Similarity=0.549 Sum_probs=136.3
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCC----CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHh
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYE----SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAIL 123 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~----~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~l 123 (548)
..+.+.+.+.+. ..+|||++.++.+.. ..+++|..|.|+|||+++|+|++||+|++|||+++.++++..++..+
T Consensus 3 ~~~~~~v~l~~~--~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 80 (196)
T 3gsl_A 3 SMEYEEITLERG--NSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEAL 80 (196)
T ss_dssp CEEEEEEEEECB--TTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CcEEEEEEEEEC--CCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 346788999988 688999999987642 46899999999999999999999999999999999999988866444
Q ss_pred h-CCCCeEEEEEecC---------------cceeEEEecCCCCC--CCCCCeEEEEeccCChhhhcCCCCCCCEEEEECC
Q psy6405 124 K-RGPPVEITLIKDG---------------AGLGFSLEGGKDSP--FGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINN 185 (548)
Q Consensus 124 k-~g~~VtVtV~RdG---------------kgLGfSItgg~~s~--lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNG 185 (548)
+ .+..+.++|.|.+ .++|+++....... ....+++|..|.++|+|+++|+|++||+|++|||
T Consensus 81 ~~~g~~v~l~v~r~~~~~~~~~~v~l~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng 160 (196)
T 3gsl_A 81 KEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNS 160 (196)
T ss_dssp HTSCSEEEEEEEEECCCCEEEEEEEEEEBTTBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETT
T ss_pred HhCCCcEEEEEEecCCCccccEEEEEecCCCCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECC
Confidence 4 4677888887754 23556665433221 1124789999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHcCCCceeEEEEeccc
Q psy6405 186 VPVTEMSRIEAWSLLKKLNDGTIQDIKALGYD 217 (548)
Q Consensus 186 vsV~~~t~~EavelLrs~~g~~V~LlV~RilD 217 (548)
+++.++++.+++++++.. +..+.+++.|...
T Consensus 161 ~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~~~ 191 (196)
T 3gsl_A 161 VGLEDVMHEDAVAALKNT-YDVVYLKVAKPSN 191 (196)
T ss_dssp EECSSCBHHHHHHHHHSC-CEEEEEEEEEESC
T ss_pred CcCCCCCHHHHHHHHHcC-CCeEEEEEeCCCC
Confidence 999999999999999875 6788888888654
No 2
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.86 E-value=1.8e-20 Score=177.49 Aligned_cols=167 Identities=17% Similarity=0.278 Sum_probs=133.2
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCC-CCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccC--ccHHHHHHHhh
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYES-KEITVHKVISGTPADRDGRLQKGDRILSINGKSMKG--LTHKESLAILK 124 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~-~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~--~s~~~aV~~lk 124 (548)
.++...+.+.+. ..+|||+++++.+... .+++|..|.++|||+++|+|++||+|++|||+++.+ +++.+++..++
T Consensus 16 ~~~~~~v~~~~~--~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 93 (206)
T 3r0h_A 16 PNKKILIELKVE--KKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFH 93 (206)
T ss_dssp TTSCEEEEEECT--TSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHH
T ss_pred CCCEEEEEEEeC--CCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHH
Confidence 456778889887 6999999998876533 579999999999999998899999999999999999 77777665554
Q ss_pred -CCCC-eEEEEEecCcce--eEEEe--cCCCCCCC------CCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCC
Q psy6405 125 -RGPP-VEITLIKDGAGL--GFSLE--GGKDSPFG------DQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMS 192 (548)
Q Consensus 125 -~g~~-VtVtV~RdGkgL--GfSIt--gg~~s~lG------~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t 192 (548)
.+.. +.++|.|.+... .+++. ......+| ..+++|.+|.++|+|+++|+|+.||+|++|||+++.+++
T Consensus 94 ~~~~~~v~l~v~R~~~~~~~~~~v~l~~~~~~~lG~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~ 173 (206)
T 3r0h_A 94 TTYEKAVTLTVFRADPPELEKFNVDLMKKAGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLP 173 (206)
T ss_dssp SCCSSEEEEEEECCSSCCEEEEEEEEECCTTCCCCEEEEECSSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCC
T ss_pred hcCCCceEEEEEecccCCCcEEEEEEecCCCCccCeEEEcCCceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCC
Confidence 3455 888888866432 22222 11111222 136899999999999999889999999999999999999
Q ss_pred HHHHHHHHHHcCCCceeEEEEeccc
Q psy6405 193 RIEAWSLLKKLNDGTIQDIKALGYD 217 (548)
Q Consensus 193 ~~EavelLrs~~g~~V~LlV~RilD 217 (548)
+.+++.+++.. +..+.+++.|...
T Consensus 174 ~~~~~~~l~~~-~~~v~L~V~R~~~ 197 (206)
T 3r0h_A 174 FQVCYALFKGA-NGKVSMEVTRPKP 197 (206)
T ss_dssp HHHHHHHHHTC-CSEEEEEEEEECC
T ss_pred HHHHHHHHHcC-CCeEEEEEEeCCC
Confidence 99999999876 5688999988644
No 3
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.83 E-value=3.2e-19 Score=168.90 Aligned_cols=166 Identities=26% Similarity=0.448 Sum_probs=132.2
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhc-CCCCCCCEEEEECCeeccCccHHHHHHHhh-C
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRD-GRLQKGDRILSINGKSMKGLTHKESLAILK-R 125 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqA-GrLq~GDrILaINGv~V~~~s~~~aV~~lk-~ 125 (548)
...++.+.+.+. ...+|||++.++.+. ..+++|..|.++|||+++ | |++||+|++|||+++.++++.+++..+. .
T Consensus 5 ~~~~~~v~l~~~-~~~~lG~~i~~~~~~-~~~~~V~~v~~~spA~~agg-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (200)
T 2qt5_A 5 FKGSTVVELMKK-EGTTLGLTVSGGIDK-DGKPRVSNLRQGGIAARSDQ-LDVGDYIKAVNGINLAKFRHDEIISLLKNV 81 (200)
T ss_dssp CEEEEEEEEECC-TTCCCCEEEECCTTS-SSCSEEEEECTTSHHHHTTS-CCTTCEEEEETTEECTTSCHHHHHHHHHTC
T ss_pred cCCCEEEEEEeC-CCCCCCEEEecccCC-CCCeEEEEECCCChHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 345688888887 488999999987654 357899999999999999 7 9999999999999999998888665443 4
Q ss_pred CCCeEEEEEecCc-----------------------ceeEEEecCCCCC-CCCCCeEEEEeccCChhhhcCCCCCCCEEE
Q psy6405 126 GPPVEITLIKDGA-----------------------GLGFSLEGGKDSP-FGDQPLTVKKIFTGGCAEKNGQLKAGDEIL 181 (548)
Q Consensus 126 g~~VtVtV~RdGk-----------------------gLGfSItgg~~s~-lG~~gI~VssV~pgSpAekaGrLq~GDrIL 181 (548)
+..+.++|.|++. .+|+.+..+.... ....+++|..|.++|+|+++|+|++||+|+
T Consensus 82 g~~v~l~v~R~~~~~~~~g~~~~~~~~~v~l~~~~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~ 161 (200)
T 2qt5_A 82 GERVVLEVEYELPPVSIQGSSVMFRTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLL 161 (200)
T ss_dssp CSEEEEEEEEECCCCCCCCSSEEEEEEEEEEECBTTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEE
T ss_pred CCeEEEEEeccCCCcccCCCccceeEEEEEEecCCCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEE
Confidence 6678888877542 1333333221110 002368999999999999999999999999
Q ss_pred EECCEEcCCCCHHHHHHHHHHcCCCceeEEEEeccc
Q psy6405 182 TINNVPVTEMSRIEAWSLLKKLNDGTIQDIKALGYD 217 (548)
Q Consensus 182 aVNGvsV~~~t~~EavelLrs~~g~~V~LlV~RilD 217 (548)
+|||.++.++++.++.++++. .+..+.+.+.|...
T Consensus 162 ~ing~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~~~ 196 (200)
T 2qt5_A 162 SVDGIRLLGTTHAEAMSILKQ-CGQEATLLIEYDVS 196 (200)
T ss_dssp EETTEECTTCCHHHHHHHHHT-TCSEEEEEEEEEEE
T ss_pred EECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECCc
Confidence 999999999999999999998 57889999988643
No 4
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.82 E-value=5.2e-19 Score=167.45 Aligned_cols=166 Identities=28% Similarity=0.397 Sum_probs=131.9
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCC---CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDY---ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK- 124 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~---~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk- 124 (548)
.+.++|.+.+. ++.+|||++.++.+. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.++...+.
T Consensus 5 ~~~~~v~l~~~-~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 83 (196)
T 1p1d_A 5 TETTEVVLTAD-PVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRD 83 (196)
T ss_dssp CEEEEEEEECB-TTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHT
T ss_pred cEEEEEEEEeC-CCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 45788899887 479999999988543 2357899999999999999999999999999999999765555444333
Q ss_pred --CCCCeEEEEEecCc--------ceeEEEecCCCCCCC-----------CCCeEEEEeccCChhhhcCCCCCCCEEEEE
Q psy6405 125 --RGPPVEITLIKDGA--------GLGFSLEGGKDSPFG-----------DQPLTVKKIFTGGCAEKNGQLKAGDEILTI 183 (548)
Q Consensus 125 --~g~~VtVtV~RdGk--------gLGfSItgg~~s~lG-----------~~gI~VssV~pgSpAekaGrLq~GDrILaV 183 (548)
++..+.++|.|++. ...+.+.......+| ..+++|..|.++|||+++|+|++||+|++|
T Consensus 84 ~~~g~~v~l~v~R~~~~~~~~~~~~~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~v 163 (196)
T 1p1d_A 84 SSITSKVTLEIEFDVAESVIPSSGTFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAI 163 (196)
T ss_dssp CCSSSEEEEEEEECSCSCCBCCSSCEEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEE
T ss_pred CCCCCeEEEEEEecCCCCCCCCCCcEEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEE
Confidence 36778999998773 233333321111111 247899999999999999999999999999
Q ss_pred CCEEcCCCCHHHHHHHHHHcCCCceeEEEEecc
Q psy6405 184 NNVPVTEMSRIEAWSLLKKLNDGTIQDIKALGY 216 (548)
Q Consensus 184 NGvsV~~~t~~EavelLrs~~g~~V~LlV~Ril 216 (548)
||.++.++++.++.++++.. +..+.+.+.|..
T Consensus 164 ng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~~ 195 (196)
T 1p1d_A 164 DNIRLDSCSMEDAVQILQQC-EDLVKLKIRKDE 195 (196)
T ss_dssp TTEEGGGCCHHHHHHHHHHC-TTCEEEEEECCC
T ss_pred CCEECCCCCHHHHHHHHHhC-CCEEEEEEEeCC
Confidence 99999998899999999987 788999998864
No 5
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.78 E-value=4.1e-18 Score=191.37 Aligned_cols=168 Identities=33% Similarity=0.540 Sum_probs=137.4
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCC----CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHh
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYE----SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAIL 123 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~----~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~l 123 (548)
..++++|++.+. ..+|||+|.+|.+.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..+
T Consensus 57 ~~~~~~v~l~k~--~~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 134 (721)
T 2xkx_A 57 EMEYEEITLERG--NSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEAL 134 (721)
T ss_pred CceEEEEEEEeC--CCCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHh
Confidence 567789999998 479999999987642 46899999999999999999999999999999999999998877555
Q ss_pred h-CCCCeEEEEEecC---------------cceeEEEecCCCCC--CCCCCeEEEEeccCChhhhcCCCCCCCEEEEECC
Q psy6405 124 K-RGPPVEITLIKDG---------------AGLGFSLEGGKDSP--FGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINN 185 (548)
Q Consensus 124 k-~g~~VtVtV~RdG---------------kgLGfSItgg~~s~--lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNG 185 (548)
+ .+..+.++|.|.+ .++||++..+.... .+..+++|..|.++|+|+++|+|++||+|++|||
T Consensus 135 ~~~g~~v~l~v~R~~~~~~~~~~v~l~k~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng 214 (721)
T 2xkx_A 135 KEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNS 214 (721)
T ss_pred hccccccceEEEecccccccceeeeeeeecCCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECC
Confidence 3 4566777776654 34556555432211 1134799999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHcCCCceeEEEEecccc
Q psy6405 186 VPVTEMSRIEAWSLLKKLNDGTIQDIKALGYDL 218 (548)
Q Consensus 186 vsV~~~t~~EavelLrs~~g~~V~LlV~RilDL 218 (548)
+++.++++.+++.+++.. +..+.++|.|....
T Consensus 215 ~~v~~~~~~~~~~~l~~~-~~~v~l~V~R~g~~ 246 (721)
T 2xkx_A 215 VGLEDVMHEDAVAALKNT-YDVVYLKVAKPSNA 246 (721)
T ss_pred eeCCCCCHHHHHHHHHcC-CCeEEEEEEeCCcc
Confidence 999999999999999876 66889999887643
No 6
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.76 E-value=6.2e-17 Score=149.63 Aligned_cols=156 Identities=21% Similarity=0.290 Sum_probs=123.1
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHH--HHHhhCC
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKES--LAILKRG 126 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~a--V~~lk~g 126 (548)
.+++.|.+.|. ...+|||++... ..+++|..|.++|||+++| |++||+|++|||+++.++++... +.....+
T Consensus 3 ~~~r~v~l~k~-~~~~lG~~~~~~----~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~ 76 (166)
T 1w9e_A 3 MDPREVILCKD-QDGKIGLRLKSI----DNGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAFG 76 (166)
T ss_dssp CCCEEEEEECC-TTSCCSEEEEEE----TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred CCCEEEEEEeC-CCCcEeEEEEeC----CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 46789999987 478999999863 2589999999999999999 99999999999999999988333 3333366
Q ss_pred CCeEEEEEecCcceeEEEecCCCCCCCC---CCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSPFGD---QPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL 203 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~lG~---~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~ 203 (548)
..+.++|.|.+....+++.......+|. .+ +|..|.++|+|+++| |+.||+|++|||.++.++.+.++.-.++..
T Consensus 77 ~~v~l~vr~~~~~~~v~l~~~~~~~lG~~~~~g-~v~~v~~~s~a~~aG-l~~GD~I~~ing~~v~~~~~~~v~~~v~r~ 154 (166)
T 1w9e_A 77 EKITMTIRDRPFERTITMHKDSTGHVGFIFKNG-KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTS 154 (166)
T ss_dssp SEEEEEEECCTTCEEEEEECCTTSCCSEEEETT-EEEEECTTSHHHHTT-CCSSEEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred CEEEEEEEcCCCcEEEEEecCCCCcEeEEEeCC-EEEEEccCCHHHHcC-CCCCCEEEEECCEECCCCChHHHHHHHhhC
Confidence 7889999544477778877433233332 13 788999999999999 999999999999999999988877777665
Q ss_pred CCCceeEEEE
Q psy6405 204 NDGTIQDIKA 213 (548)
Q Consensus 204 ~g~~V~LlV~ 213 (548)
+..+.+.+.
T Consensus 155 -g~~~~l~v~ 163 (166)
T 1w9e_A 155 -GTVVTITIM 163 (166)
T ss_dssp -CSEEEEEEE
T ss_pred -CCEEEEEEE
Confidence 455555443
No 7
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.68 E-value=1.8e-17 Score=173.97 Aligned_cols=163 Identities=23% Similarity=0.364 Sum_probs=73.6
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCC-CCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh--
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSD-YESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-- 124 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d-~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-- 124 (548)
....+.|.+.+. ++++|||++.+... ....+++|..|.++|||+++|+|++||+|++|||+++.+|++.+++..++
T Consensus 202 ~~~~~~V~i~k~-~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~ 280 (388)
T 3suz_A 202 SENCKELQLEKH-KGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGL 280 (388)
T ss_dssp SSCCEEEEECCC-SSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTC
T ss_pred cccceEEEEECC-CCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhc
Confidence 456788999987 37899999986321 12235899999999999999999999999999999999998776654443
Q ss_pred -CCCCeEEEEEecCcceeEEEecCC-CCCCCC--CCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy6405 125 -RGPPVEITLIKDGAGLGFSLEGGK-DSPFGD--QPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLL 200 (548)
Q Consensus 125 -~g~~VtVtV~RdGkgLGfSItgg~-~s~lG~--~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelL 200 (548)
.+..+.++|.|.+....+.+.... ...+|. .+.+|..|.++|+|+++| |++||+|++|||+++.++++.++++++
T Consensus 281 ~~~~~v~l~v~r~~~~~~v~l~~~~~~~~lG~~i~~g~I~~V~~gs~A~~aG-L~~GD~Il~VNg~~v~~~s~~~~~~~l 359 (388)
T 3suz_A 281 KNQTQVKLNIVSCPPVTTVLIKRPDLKYQLGFSVQNGIICSLMRGGIAERGG-VRVGHRIIEINGQSVVATAHEKIVQAL 359 (388)
T ss_dssp TTCSCEEEEEEECCSCC---------------------------------------------------------------
T ss_pred cCCCccccccccccccceeeEeecCCCCccceEEecCEEEEeecCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 455699999998777666663221 112232 234788999999999999 999999999999999999999999999
Q ss_pred HHcCCCceeEEEE
Q psy6405 201 KKLNDGTIQDIKA 213 (548)
Q Consensus 201 rs~~g~~V~LlV~ 213 (548)
+.. +..+.+.+.
T Consensus 360 ~~~-~~~v~L~V~ 371 (388)
T 3suz_A 360 SNS-VGEIHMKTM 371 (388)
T ss_dssp -------------
T ss_pred HhC-CCeEEEEEE
Confidence 886 556666653
No 8
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.67 E-value=1.4e-15 Score=170.92 Aligned_cols=160 Identities=32% Similarity=0.527 Sum_probs=126.9
Q ss_pred eEEEEEeeCCCCCceEEEEEeCCCCC----CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-C
Q psy6405 51 VSVVVLHRDLPGNSVGITLAGGSDYE----SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-R 125 (548)
Q Consensus 51 ~~tV~L~Kd~~~~GLGfsIagG~d~~----~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~ 125 (548)
..++.+.+. ..+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||++|.++++.+++..++ .
T Consensus 155 ~~~v~l~k~--~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 232 (721)
T 2xkx_A 155 VMEIKLIKG--PKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNT 232 (721)
T ss_pred ceeeeeeee--cCCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcC
Confidence 456777765 467999998765321 358999999999999999999999999999999999998877665554 4
Q ss_pred CCCeEEEEEecCcce-----------------------------------------------------------------
Q psy6405 126 GPPVEITLIKDGAGL----------------------------------------------------------------- 140 (548)
Q Consensus 126 g~~VtVtV~RdGkgL----------------------------------------------------------------- 140 (548)
+..+.++|.|++...
T Consensus 233 ~~~v~l~V~R~g~~~~~~~~~~p~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~ 312 (721)
T 2xkx_A 233 YDVVYLKVAKPSNAYLSDSYAPPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIV 312 (721)
T ss_pred CCeEEEEEEeCCcccccCCCCCCCcccCCCCCcccccCCcccccccccccCCCCCCcccCCcccccccccccccceEEEE
Confidence 567788887765421
Q ss_pred --------eEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCceeEEE
Q psy6405 141 --------GFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTIQDIK 212 (548)
Q Consensus 141 --------GfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V~LlV 212 (548)
||++.++.. ..+++|..|.++|+|+++|+|++||+|++|||+++.++++.+++++|+.. +..+.+++
T Consensus 313 l~~~~~~lG~~i~~~~~----~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~-~~~v~L~v 387 (721)
T 2xkx_A 313 IHRGSTGLGFNIVGGED----GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNA-GQTVTIIA 387 (721)
T ss_pred EEECCCCccEEEeccCC----CCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhc-CCeEEEEE
Confidence 111111100 13789999999999999999999999999999999999999999999986 66788888
Q ss_pred Eeccc
Q psy6405 213 ALGYD 217 (548)
Q Consensus 213 ~RilD 217 (548)
.|..+
T Consensus 388 ~r~~~ 392 (721)
T 2xkx_A 388 QYKPE 392 (721)
T ss_pred EeCch
Confidence 87653
No 9
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.62 E-value=4.6e-15 Score=142.74 Aligned_cols=134 Identities=20% Similarity=0.216 Sum_probs=107.1
Q ss_pred CCeEEEEEcCCChhhhcCCCCCC-CEEEEECCeeccCccHHH-HHHHhhCCCCeEEEEEecCcc--eeEEEecCCC----
Q psy6405 78 KEITVHKVISGTPADRDGRLQKG-DRILSINGKSMKGLTHKE-SLAILKRGPPVEITLIKDGAG--LGFSLEGGKD---- 149 (548)
Q Consensus 78 ~gVvVs~V~pGSPAaqAGrLq~G-DrILaINGv~V~~~s~~~-aV~~lk~g~~VtVtV~RdGkg--LGfSItgg~~---- 149 (548)
.+++|..|.++|||+++| |++| |+|++|||+++.++++.. .+.....+..+.++|.|.+.. ..+++.+...
T Consensus 16 ~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~~~v~l~p~~~~~~~ 94 (209)
T 3rle_A 16 EGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETSVTPSNLWGGQ 94 (209)
T ss_dssp EEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTCCEEEEEECCCSSSSSS
T ss_pred CEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCceEEEEEEccccccccc
Confidence 579999999999999999 9999 999999999999988755 344455688999999986543 3444432210
Q ss_pred CCCCC------------CCeEEEEeccCChhhhcCCCCC-CCEEEEECCEEcCCCCHHHHHHHHHHcCCCceeEEEEecc
Q psy6405 150 SPFGD------------QPLTVKKIFTGGCAEKNGQLKA-GDEILTINNVPVTEMSRIEAWSLLKKLNDGTIQDIKALGY 216 (548)
Q Consensus 150 s~lG~------------~gI~VssV~pgSpAekaGrLq~-GDrILaVNGvsV~~~t~~EavelLrs~~g~~V~LlV~Ril 216 (548)
..+|. .+++|..|.++|||+++| |++ ||+|++||+. +.++. ++.++++..++..+.+.+.|..
T Consensus 95 ~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~~~~--~l~~~l~~~~g~~v~l~v~r~~ 170 (209)
T 3rle_A 95 GLLGVSIRFCSFDGANENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MNESE--DLFSLIETHEAKPLKLYVYNTD 170 (209)
T ss_dssp SSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CCSSS--CHHHHHHHTTTSCEEEEEEETT
T ss_pred CccceEEeecChhHccccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eCCHH--HHHHHHHhCCCCeEEEEEEECC
Confidence 11111 367999999999999999 999 9999999997 88777 7888898877888999998853
No 10
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.58 E-value=2e-14 Score=152.80 Aligned_cols=135 Identities=22% Similarity=0.371 Sum_probs=111.6
Q ss_pred CCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHH-HHhhCCCCeEEEEEecCcceeEEEecCCCCC-----
Q psy6405 78 KEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESL-AILKRGPPVEITLIKDGAGLGFSLEGGKDSP----- 151 (548)
Q Consensus 78 ~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV-~~lk~g~~VtVtV~RdGkgLGfSItgg~~s~----- 151 (548)
.+++|..|.++|||+++| |++||+|++|||+++.++.+...+ ....++..+.++|.|+++...++++......
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~~~~~~~ 341 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDTSTSSSASA 341 (436)
T ss_pred cceEEEEECCCChHHHCC-CCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEECCCCcccccc
Confidence 579999999999999999 999999999999999999877643 3445688999999999888777775432110
Q ss_pred ----CC--------------CCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCceeEEEE
Q psy6405 152 ----FG--------------DQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTIQDIKA 213 (548)
Q Consensus 152 ----lG--------------~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V~LlV~ 213 (548)
.+ ..+++|..|.++|||+++| |++||+|++|||+++.++. ++.++++.. ...+.+.+.
T Consensus 342 ~~~~~gl~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~--~~~~~l~~~-~~~v~l~v~ 417 (436)
T 4a8c_A 342 EMITPALEGATLSDGQLKDGGKGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRVNSIA--EMRKVLAAK-PAIIALQIV 417 (436)
T ss_pred cccccCceeeecccccccCCCCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCHH--HHHHHHHhC-CCeEEEEEE
Confidence 00 1368999999999999999 9999999999999998765 888999885 448899998
Q ss_pred eccc
Q psy6405 214 LGYD 217 (548)
Q Consensus 214 RilD 217 (548)
|...
T Consensus 418 R~g~ 421 (436)
T 4a8c_A 418 RGNE 421 (436)
T ss_pred ECCE
Confidence 8754
No 11
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.55 E-value=2.4e-14 Score=153.11 Aligned_cols=135 Identities=22% Similarity=0.320 Sum_probs=111.3
Q ss_pred CCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHH-HHHhhCCCCeEEEEEecCcceeEEEecCCCC------
Q psy6405 78 KEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKES-LAILKRGPPVEITLIKDGAGLGFSLEGGKDS------ 150 (548)
Q Consensus 78 ~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~a-V~~lk~g~~VtVtV~RdGkgLGfSItgg~~s------ 150 (548)
.+++|..|.++|||+++| |++||+|++|||++|.++.+... +....++..+.|+|.|+++...++++.....
T Consensus 282 ~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~~~v~l~~~~~~~~~~ 360 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAG-LKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVTDIKSHEQKL 360 (451)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEEETTEEEEEEEECBCHHHHHHHH
T ss_pred ceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEccCCcccccc
Confidence 589999999999999999 99999999999999999987764 3444678899999999988877776543211
Q ss_pred ------CCC---------------CCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCcee
Q psy6405 151 ------PFG---------------DQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTIQ 209 (548)
Q Consensus 151 ------~lG---------------~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V~ 209 (548)
..| ..+++|..|.++|||+++| |++||+|++|||+++.++. ++.++++. .+..+.
T Consensus 361 ~~~~~~~~G~~l~~~~~~~~~~~~~~Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng~~v~~~~--~~~~~l~~-~~~~v~ 436 (451)
T 3pv2_A 361 QSNNPFLYGLALRAFEQESPPHGNVIGVQVVGASENSAGWRAG-IRPGDIIISANKKPVTDVK--SLQTIAQE-KKKELL 436 (451)
T ss_dssp HHHSTTTTTEEEEEEEEECTTSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSHH--HHHHHTTS-SCSCEE
T ss_pred ccccccccccccccCChhHhcccCCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCHH--HHHHHHhc-CCCeEE
Confidence 011 1257899999999999999 9999999999999998764 88888887 467889
Q ss_pred EEEEeccc
Q psy6405 210 DIKALGYD 217 (548)
Q Consensus 210 LlV~RilD 217 (548)
+.+.|...
T Consensus 437 l~v~R~g~ 444 (451)
T 3pv2_A 437 VQVLRGPG 444 (451)
T ss_dssp EEEEETTE
T ss_pred EEEEECCE
Confidence 99988654
No 12
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=99.36 E-value=1.1e-13 Score=147.87 Aligned_cols=135 Identities=27% Similarity=0.391 Sum_probs=56.2
Q ss_pred CCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHH-HHhhCCCCeEEEEEecCcceeEEEecCCCC------
Q psy6405 78 KEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESL-AILKRGPPVEITLIKDGAGLGFSLEGGKDS------ 150 (548)
Q Consensus 78 ~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV-~~lk~g~~VtVtV~RdGkgLGfSItgg~~s------ 150 (548)
.+++|..|.++|||+++| |++||+|++|||+++.++.+.... ....++..+.|+|.|+++...++++.....
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~~~~~~ 364 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDS 364 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCSSHHHHHHTTSSBTTCCCEEEEESSSCEEECCCC-----------
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEecCCCccccc
Confidence 478999999999999999 999999999999999999766533 333568899999999887766555432110
Q ss_pred ------CCC--------CCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCceeEEEEecc
Q psy6405 151 ------PFG--------DQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTIQDIKALGY 216 (548)
Q Consensus 151 ------~lG--------~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V~LlV~Ril 216 (548)
.+| ..+++|..|.++|||+++| |+.||+|++|||+++.++. ++.++++..++ .+.+.+.|..
T Consensus 365 ~~~~~~~~G~~l~~~~~~~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v~~~~--~l~~~l~~~~~-~v~l~v~R~g 440 (448)
T 1ky9_A 365 SSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVKNIA--ELRKVLDSKPS-VLALNIQRGD 440 (448)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccceEeeccCCCCeEEEEEecCCCHHHHcC-CCCCCEEEEECCEECCCHH--HHHHHHHcCCC-eEEEEEEECC
Confidence 011 1357899999999999999 9999999999999998765 78888887644 7788888765
Q ss_pred c
Q psy6405 217 D 217 (548)
Q Consensus 217 D 217 (548)
.
T Consensus 441 ~ 441 (448)
T 1ky9_A 441 S 441 (448)
T ss_dssp -
T ss_pred E
Confidence 4
No 13
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.33 E-value=1.3e-11 Score=104.02 Aligned_cols=90 Identities=31% Similarity=0.534 Sum_probs=76.0
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCC
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGP 127 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~ 127 (548)
++.++|.+.+. ..+|||++.++.+....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..+. .+.
T Consensus 3 g~~~~v~l~~~--~~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 80 (98)
T 2opg_A 3 GCETTIEISKG--RTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQ 80 (98)
T ss_dssp CEEEEEEEECB--TTBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCS
T ss_pred CCEEEEEEEEC--CCcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 56788999987 689999999887654468999999999999999999999999999999999998777665554 456
Q ss_pred CeEEEEEecCcce
Q psy6405 128 PVEITLIKDGAGL 140 (548)
Q Consensus 128 ~VtVtV~RdGkgL 140 (548)
.+.++|.|++...
T Consensus 81 ~v~l~v~R~~~~~ 93 (98)
T 2opg_A 81 RVRLTLYRDEAPY 93 (98)
T ss_dssp EEEEEEEECSSCC
T ss_pred eEEEEEEcCCCCC
Confidence 7889999877654
No 14
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.31 E-value=1.3e-11 Score=103.71 Aligned_cols=87 Identities=32% Similarity=0.541 Sum_probs=73.9
Q ss_pred CeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCCC
Q psy6405 50 EVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGPP 128 (548)
Q Consensus 50 d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~~ 128 (548)
+.+.|.|.|..++.+|||++.++.+ ..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++..+. .+..
T Consensus 3 ~~~~v~l~k~~~~~~lG~~~~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 80 (95)
T 2vwr_A 3 EILQVALHKRDSGEQLGIKLVRRTD--EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGER 80 (95)
T ss_dssp EEEEEEEECSSTTCCCCEEEEECSS--SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSE
T ss_pred EEEEEEEEECCCCCcccEEEEeccC--CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 5678999987557899999998754 358999999999999999999999999999999999988877654443 5788
Q ss_pred eEEEEEecCc
Q psy6405 129 VEITLIKDGA 138 (548)
Q Consensus 129 VtVtV~RdGk 138 (548)
+.++|.|++.
T Consensus 81 v~l~v~R~~~ 90 (95)
T 2vwr_A 81 VNLTIARPGK 90 (95)
T ss_dssp EEEEEEEESC
T ss_pred EEEEEEcCCc
Confidence 9999998765
No 15
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.30 E-value=1.6e-11 Score=105.29 Aligned_cols=95 Identities=28% Similarity=0.460 Sum_probs=74.6
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCC----CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYE----SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK 124 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~----~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk 124 (548)
+++++|.|.|. ..+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++
T Consensus 2 e~~~~v~l~k~--~~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (105)
T 2awx_A 2 EKIMEIKLIKG--PKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALK 79 (105)
T ss_dssp -CEEEEEEECB--TTBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred CeEEEEEEEEC--CCCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45788999988 479999999886532 248999999999999999999999999999999999998888766554
Q ss_pred -CCCCeEEEEEecCcceeEEEe
Q psy6405 125 -RGPPVEITLIKDGAGLGFSLE 145 (548)
Q Consensus 125 -~g~~VtVtV~RdGkgLGfSIt 145 (548)
.+..+.++|.|++....+.++
T Consensus 80 ~~~~~v~l~v~R~~~~~~~~~~ 101 (105)
T 2awx_A 80 NTSDFVYLKVAKPTSMYISRHH 101 (105)
T ss_dssp SCCSEEEEEEECCCC-------
T ss_pred cCCCeEEEEEEcCCCCCCcccc
Confidence 467789999998776555544
No 16
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.28 E-value=2.9e-11 Score=101.58 Aligned_cols=89 Identities=37% Similarity=0.631 Sum_probs=74.9
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCC--CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYE--SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK- 124 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~--~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk- 124 (548)
.++++++++.+. ..+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..+.
T Consensus 3 ~g~~~~v~l~k~--~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 80 (96)
T 1d5g_A 3 PGDIFEVELAKN--DNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN 80 (96)
T ss_dssp TTCEEEEEEECS--SSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHS
T ss_pred CCCEEEEEEEeC--CCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 467899999987 589999999876532 358999999999999999999999999999999999998887765554
Q ss_pred CCCCeEEEEEecCc
Q psy6405 125 RGPPVEITLIKDGA 138 (548)
Q Consensus 125 ~g~~VtVtV~RdGk 138 (548)
.+..+.++|.|++.
T Consensus 81 ~g~~v~l~v~R~~~ 94 (96)
T 1d5g_A 81 TGQVVHLLLEKGQS 94 (96)
T ss_dssp CCSEEEEEEECCSC
T ss_pred CCCeEEEEEEcCCC
Confidence 46778888888653
No 17
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.28 E-value=2.5e-11 Score=101.34 Aligned_cols=87 Identities=33% Similarity=0.582 Sum_probs=72.6
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCC----CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYE----SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK 124 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~----~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk 124 (548)
.++++|.|.|. ..+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..+.
T Consensus 2 ~~~~~v~l~k~--~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (94)
T 2fe5_A 2 MTIMEVNLLKG--PKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLK 79 (94)
T ss_dssp CCEEEEEEECC--TTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred cEEEEEEEEEC--CCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 36788999987 578999999876532 348999999999999999999999999999999999998888765554
Q ss_pred -CCCCeEEEEEecC
Q psy6405 125 -RGPPVEITLIKDG 137 (548)
Q Consensus 125 -~g~~VtVtV~RdG 137 (548)
.+..+.++|.|++
T Consensus 80 ~~~~~v~l~v~R~g 93 (94)
T 2fe5_A 80 NTSDMVYLKVAKPG 93 (94)
T ss_dssp TCCSEEEEEEECCC
T ss_pred cCCCeEEEEEEcCC
Confidence 4557888888765
No 18
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=1.1e-11 Score=105.28 Aligned_cols=90 Identities=32% Similarity=0.536 Sum_probs=77.2
Q ss_pred CCCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhCC
Q psy6405 47 GTSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKRG 126 (548)
Q Consensus 47 ~~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~g 126 (548)
...+++++.+.+.....+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||+++.++++..++..++.+
T Consensus 5 ~~~~~~~v~l~~~~~~~~lG~~~~~~~~~-~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 82 (101)
T 1uez_A 5 SSGEVRLVSLRRAKAHEGLGFSIRGGSEH-GVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKGS 82 (101)
T ss_dssp CSCCCEEECCCCCCTTTCSSEEEEECTTT-TCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSSS
T ss_pred CCCccEEEEEEECCCCCcccEEEeCCCCC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcCC
Confidence 35678889998865578999999987643 3579999999999999999 999999999999999999997777777777
Q ss_pred CCeEEEEEecCc
Q psy6405 127 PPVEITLIKDGA 138 (548)
Q Consensus 127 ~~VtVtV~RdGk 138 (548)
..+.++|.|+++
T Consensus 83 ~~v~l~v~R~g~ 94 (101)
T 1uez_A 83 KKLVLSVYSAGR 94 (101)
T ss_dssp SSCCEEECCCCC
T ss_pred CeEEEEEEECCc
Confidence 889999988764
No 19
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.27 E-value=1.9e-11 Score=103.93 Aligned_cols=90 Identities=29% Similarity=0.482 Sum_probs=75.2
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCC----CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYE----SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK 124 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~----~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk 124 (548)
.+.++|.+.+. ..+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++..++
T Consensus 3 ~~~~~v~l~k~--~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 80 (102)
T 2i1n_A 3 FKYEEIVLERG--NSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALK 80 (102)
T ss_dssp EEEEEEEEECB--TTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred ceEEEEEEEEC--CCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45688899887 689999999876532 458999999999999999999999999999999999988877654443
Q ss_pred -CCCCeEEEEEecCcce
Q psy6405 125 -RGPPVEITLIKDGAGL 140 (548)
Q Consensus 125 -~g~~VtVtV~RdGkgL 140 (548)
.+..+.++|.|++...
T Consensus 81 ~~g~~v~l~v~R~~~~~ 97 (102)
T 2i1n_A 81 EAGPVVRLVVRRRQPPP 97 (102)
T ss_dssp HSCSEEEEEEEEECCCC
T ss_pred cCCCeEEEEEEeCCCCC
Confidence 5678999999977643
No 20
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.27 E-value=2.6e-11 Score=101.84 Aligned_cols=87 Identities=28% Similarity=0.565 Sum_probs=72.7
Q ss_pred CeEEEEEeeCCCCCceEEEEEeCCCC-----CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHh-
Q psy6405 50 EVSVVVLHRDLPGNSVGITLAGGSDY-----ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAIL- 123 (548)
Q Consensus 50 d~~tV~L~Kd~~~~GLGfsIagG~d~-----~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~l- 123 (548)
+.+.+.+.+. ..+|||++.++.+. ...+++|..|.++|||+++| |++||+|++|||+++.++++..++...
T Consensus 3 ~~~~v~~~~~--~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~ 79 (97)
T 2w4f_A 3 EELTLTILRQ--TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALR 79 (97)
T ss_dssp CEEEEEEECB--TTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred eEEEEEEEeC--CCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHh
Confidence 3466778777 78999999987653 24689999999999999999 999999999999999999887765444
Q ss_pred hCCCCeEEEEEecCcc
Q psy6405 124 KRGPPVEITLIKDGAG 139 (548)
Q Consensus 124 k~g~~VtVtV~RdGkg 139 (548)
.++..+.++|.|+++.
T Consensus 80 ~~g~~v~l~v~R~g~~ 95 (97)
T 2w4f_A 80 GAGTAVQMRVWRERET 95 (97)
T ss_dssp TSCSEEEEEEECCSSC
T ss_pred CCCCeEEEEEEeCCcc
Confidence 3688899999998764
No 21
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.27 E-value=7.1e-12 Score=110.94 Aligned_cols=95 Identities=26% Similarity=0.438 Sum_probs=72.3
Q ss_pred CCCCCeEEEEEeeCCCCCceEEEEEeCCCCC--CCCeEEEEEcCCChhhhc-CCCCCCCEEEEECCeeccCccHHHHHHH
Q psy6405 46 PGTSEVSVVVLHRDLPGNSVGITLAGGSDYE--SKEITVHKVISGTPADRD-GRLQKGDRILSINGKSMKGLTHKESLAI 122 (548)
Q Consensus 46 ~~~~d~~tV~L~Kd~~~~GLGfsIagG~d~~--~~gVvVs~V~pGSPAaqA-GrLq~GDrILaINGv~V~~~s~~~aV~~ 122 (548)
+....+++|.|.|. +..+|||++.++.+.. ..+++|..|.++|||+++ | |++||+|++|||+++.++++.+++..
T Consensus 20 s~~~~~~~v~l~k~-~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~agg-L~~GD~Il~VnG~~v~~~~~~~~~~~ 97 (120)
T 2iwo_A 20 FQSMGLRTVEMKKG-PTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQK-LRVGDRIVTICGTSTEGMTHTQAVNL 97 (120)
T ss_dssp -----CEEEEEEC-----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTC-CCTTCEEEEETTEECTTCBHHHHHHH
T ss_pred CCCCCcEEEEEEcC-CCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 34567899999987 3679999999875422 247999999999999999 6 99999999999999999999887765
Q ss_pred hh-CCCCeEEEEEecCcceeE
Q psy6405 123 LK-RGPPVEITLIKDGAGLGF 142 (548)
Q Consensus 123 lk-~g~~VtVtV~RdGkgLGf 142 (548)
++ .+..++++|.|.+....+
T Consensus 98 l~~~~~~v~l~v~r~g~~~~~ 118 (120)
T 2iwo_A 98 LKNASGSIEMQVVAGGDVSET 118 (120)
T ss_dssp HHHCCSEEEEEEECCTTSSSC
T ss_pred HHcCCCeEEEEEEECCcccee
Confidence 54 466789999998765543
No 22
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.27 E-value=3.3e-11 Score=100.23 Aligned_cols=86 Identities=23% Similarity=0.428 Sum_probs=72.4
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhC-C
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKR-G 126 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~-g 126 (548)
+..+++|.+.|. ..+|||++.++.+ ..+++|..|.++|||+++| |++||+|++|||.++.++++.++...+.. +
T Consensus 2 ~~~~r~v~l~k~--~~g~G~~~~~~~~--~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 76 (90)
T 2he4_A 2 MLRPRLCHLRKG--PQGYGFNLHSDKS--RPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKARE 76 (90)
T ss_dssp TTCCEEEEEECB--TTBCCEEEEECSS--SSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSS
T ss_pred CCCcEEEEEEEC--CCCccEEEEccCC--CCCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 456899999998 5799999998754 3589999999999999999 99999999999999999987776655543 5
Q ss_pred CCeEEEEEecCc
Q psy6405 127 PPVEITLIKDGA 138 (548)
Q Consensus 127 ~~VtVtV~RdGk 138 (548)
..+.++|.|.+.
T Consensus 77 ~~v~l~v~r~~~ 88 (90)
T 2he4_A 77 DEARLLVVGPST 88 (90)
T ss_dssp SEEEEEEECCCC
T ss_pred CcEEEEEEccCC
Confidence 678888888654
No 23
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.27 E-value=1e-11 Score=109.41 Aligned_cols=96 Identities=30% Similarity=0.576 Sum_probs=75.4
Q ss_pred ccCCCCCCCCeEEEEEeeCCCCCceEEEEEeCCCCC--CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHH
Q psy6405 41 PSLLIPGTSEVSVVVLHRDLPGNSVGITLAGGSDYE--SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKE 118 (548)
Q Consensus 41 i~gml~~~~d~~tV~L~Kd~~~~GLGfsIagG~d~~--~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~ 118 (548)
...++.....+++|.|.|. ..+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+
T Consensus 16 ~~~~~~~~~~~~~v~L~k~--~~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~ 93 (117)
T 2fne_A 16 ENLYFQSMPQCKSITLERG--PDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEE 93 (117)
T ss_dssp -------CCEEEEEEECCB--TTBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH
T ss_pred ccccccCCCccEEEEEEeC--CCcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH
Confidence 3455566778899999998 489999999875432 247999999999999999999999999999999999888888
Q ss_pred HHHHhh-CCCCeEEEEEecCc
Q psy6405 119 SLAILK-RGPPVEITLIKDGA 138 (548)
Q Consensus 119 aV~~lk-~g~~VtVtV~RdGk 138 (548)
++..++ .+..+.++|.|.++
T Consensus 94 ~~~~l~~~~~~v~l~v~R~g~ 114 (117)
T 2fne_A 94 AVAILKRTKGTVTLMVLSSDE 114 (117)
T ss_dssp HHHHHHHCCSSEEEEEEECSC
T ss_pred HHHHHHcCCCeEEEEEEeCCc
Confidence 765554 46678999998765
No 24
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.27 E-value=3.2e-11 Score=102.38 Aligned_cols=88 Identities=30% Similarity=0.544 Sum_probs=74.4
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCC----CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYE----SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK 124 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~----~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk 124 (548)
..++.|.+.|. ..+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..+.
T Consensus 6 ~~~~~v~l~~~--~~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 83 (101)
T 2jik_A 6 VTEEEINLTRG--PSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFR 83 (101)
T ss_dssp EEEEEEEEECC--TTCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred CccEEEEEEeC--CCCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45788999987 489999999987643 368999999999999999999999999999999999998888765554
Q ss_pred -CCCCeEEEEEecCc
Q psy6405 125 -RGPPVEITLIKDGA 138 (548)
Q Consensus 125 -~g~~VtVtV~RdGk 138 (548)
.+..+.++|.|.+.
T Consensus 84 ~~g~~v~l~v~R~~~ 98 (101)
T 2jik_A 84 NAGYAVSLRVQHRLE 98 (101)
T ss_dssp TCCSEEEEEEEEESC
T ss_pred hCCCeEEEEEEeCCC
Confidence 46678899988654
No 25
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.26 E-value=3.7e-11 Score=100.98 Aligned_cols=84 Identities=27% Similarity=0.544 Sum_probs=73.7
Q ss_pred CCCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhCC
Q psy6405 47 GTSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKRG 126 (548)
Q Consensus 47 ~~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~g 126 (548)
....+++|.+.+. ..+|||.+.+. .+++|..|.++|||+++| |++||+|++|||+++.++++.+++..++.+
T Consensus 5 ~~~~~r~v~l~~~--~~~~G~~l~~~-----~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~g 76 (93)
T 2dls_A 5 SSGVQRCVIIQKD--QHGFGFTVSGD-----RIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIKSG 76 (93)
T ss_dssp CCCCEEEEEEECS--SSSCCEEEECS-----SSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHTSS
T ss_pred CCCCCEEEEEEeC--CCceeEEEeCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcCC
Confidence 4567889999887 58999999853 478999999999999999 999999999999999999888877777788
Q ss_pred CCeEEEEEecCc
Q psy6405 127 PPVEITLIKDGA 138 (548)
Q Consensus 127 ~~VtVtV~RdGk 138 (548)
..+.|+|.|++.
T Consensus 77 ~~v~l~v~R~~~ 88 (93)
T 2dls_A 77 AYVALTLLGSSS 88 (93)
T ss_dssp SEEEEEEECCCC
T ss_pred CEEEEEEEECCC
Confidence 999999998654
No 26
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.26 E-value=1.7e-11 Score=105.80 Aligned_cols=99 Identities=26% Similarity=0.467 Sum_probs=81.5
Q ss_pred CCCCCeEEEEEeeCCCCCceEEEEEeCCCCC--CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHh
Q psy6405 46 PGTSEVSVVVLHRDLPGNSVGITLAGGSDYE--SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAIL 123 (548)
Q Consensus 46 ~~~~d~~tV~L~Kd~~~~GLGfsIagG~d~~--~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~l 123 (548)
....+.++|.+.+. ..+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..+
T Consensus 4 ~~~~~~~~v~l~~~--~~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 81 (110)
T 1um1_A 4 GSSGYVFTVELERG--PSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLI 81 (110)
T ss_dssp CSCCCEEEEEEECC--TTCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHH
T ss_pred CCCCcEEEEEEEEC--CCccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 34677899999987 479999999876542 35899999999999999999999999999999999998888876555
Q ss_pred h-CCCCeEEEEEecCcceeEEEec
Q psy6405 124 K-RGPPVEITLIKDGAGLGFSLEG 146 (548)
Q Consensus 124 k-~g~~VtVtV~RdGkgLGfSItg 146 (548)
. .+..+.++|.|.+....++++.
T Consensus 82 ~~~~~~v~l~v~R~~~~~~~~v~~ 105 (110)
T 1um1_A 82 RHGGKKMRFLVAKSDVETAKKIHS 105 (110)
T ss_dssp HTCCSEEEEEEECCCHHHHHHHSS
T ss_pred HcCCCeEEEEEEeCCcceeEEEEe
Confidence 4 4677899999987766555544
No 27
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.26 E-value=4.3e-11 Score=99.51 Aligned_cols=86 Identities=21% Similarity=0.359 Sum_probs=71.3
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RG 126 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g 126 (548)
..+.++|.+.+.....+|||++.++.+ ..+++|..|.++|||+++| |++||+|++|||+++.++++..++..+. .+
T Consensus 4 ~~~~~~v~l~k~~~~~~~G~~~~~~~~--~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 80 (91)
T 1m5z_A 4 PVELHKVTLYKDSGMEDFGFSVADGLL--EKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAESG 80 (91)
T ss_dssp CCEEEEEEEECCTTCSSSSEEEEECTT--SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTST
T ss_pred CcceEEEEEEECCCCCCccEEEEeccC--CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 456788999987534689999998754 3689999999999999999 9999999999999999998777654443 46
Q ss_pred CCeEEEEEec
Q psy6405 127 PPVEITLIKD 136 (548)
Q Consensus 127 ~~VtVtV~Rd 136 (548)
..+.++|.|+
T Consensus 81 ~~v~l~v~R~ 90 (91)
T 1m5z_A 81 NKLDLVISRN 90 (91)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEeC
Confidence 7788888875
No 28
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.26 E-value=2.6e-11 Score=102.04 Aligned_cols=88 Identities=35% Similarity=0.666 Sum_probs=72.6
Q ss_pred CeEEEEEeeCCCCCceEEEEEeCCCCC---CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-C
Q psy6405 50 EVSVVVLHRDLPGNSVGITLAGGSDYE---SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-R 125 (548)
Q Consensus 50 d~~tV~L~Kd~~~~GLGfsIagG~d~~---~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~ 125 (548)
+.++|.+.+. ..+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||.++.+++..++...+. .
T Consensus 3 ~~~~v~l~k~--~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 80 (97)
T 2jil_A 3 RTVEVTLHKE--GNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQC 80 (97)
T ss_dssp EEEEEEEECB--TTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHS
T ss_pred eEEEEEEEeC--CCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3567888876 689999999876432 458999999999999999999999999999999999977777654443 6
Q ss_pred CCCeEEEEEecCcc
Q psy6405 126 GPPVEITLIKDGAG 139 (548)
Q Consensus 126 g~~VtVtV~RdGkg 139 (548)
+..+.++|.|++..
T Consensus 81 g~~v~l~v~R~~~~ 94 (97)
T 2jil_A 81 GQEAALLIEYDVSE 94 (97)
T ss_dssp CSEEEEEEEEECCC
T ss_pred CCeEEEEEEeCCCc
Confidence 78899999997754
No 29
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.25 E-value=6.5e-12 Score=109.36 Aligned_cols=102 Identities=21% Similarity=0.319 Sum_probs=84.1
Q ss_pred CCccCCCCCCCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHH
Q psy6405 39 GCPSLLIPGTSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKE 118 (548)
Q Consensus 39 gai~gml~~~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~ 118 (548)
.++++|+... +++++++.++ ...+|||.+..+.+ ..+++|..|.++|||+++| |++||+|++|||+++.++++.+
T Consensus 3 ~a~~~~~~~l-dp~~~~l~~~-~~~~~G~~l~~~~~--~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~ 77 (114)
T 2edz_A 3 SGSSGMASTF-NPRECKLSKQ-EGQNYGFFLRIEKD--TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQ 77 (114)
T ss_dssp CCCCCCCCCC-CCEEEEEECC-TTCCCSCEEECCTT--CCSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHH
T ss_pred hhhhhHhhcC-CCEEEEEeCC-CCCcccEEEEEecC--CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 4678888866 8999999998 47889999886543 3589999999999999999 9999999999999999987777
Q ss_pred HHHHhh-CCCCeEEEEEecCcceeEEEe
Q psy6405 119 SLAILK-RGPPVEITLIKDGAGLGFSLE 145 (548)
Q Consensus 119 aV~~lk-~g~~VtVtV~RdGkgLGfSIt 145 (548)
++..++ .+..+.++|.|.+....+.+.
T Consensus 78 ~~~~l~~~g~~v~l~v~R~~~~~~~~~~ 105 (114)
T 2edz_A 78 VVELVRKSGNSVTLLVLDGDSYEKAVKN 105 (114)
T ss_dssp HHHHHHHTCSEEEEEEECHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEEEECCcceehhhc
Confidence 654443 478899999998776555444
No 30
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.25 E-value=4.8e-11 Score=102.57 Aligned_cols=88 Identities=31% Similarity=0.605 Sum_probs=74.3
Q ss_pred CCCCeEEEEEeeCCCCCceEEEEEeCCCC-------CCCCeEEEEEcCCChhhhc-CCCCCCCEEEEECCeeccCccHHH
Q psy6405 47 GTSEVSVVVLHRDLPGNSVGITLAGGSDY-------ESKEITVHKVISGTPADRD-GRLQKGDRILSINGKSMKGLTHKE 118 (548)
Q Consensus 47 ~~~d~~tV~L~Kd~~~~GLGfsIagG~d~-------~~~gVvVs~V~pGSPAaqA-GrLq~GDrILaINGv~V~~~s~~~ 118 (548)
.+.++++|.+.|. ..+|||++.++.+. ...+++|..|.++|||+++ | |++||+|++|||+++.++++.+
T Consensus 5 ~~~~~~~v~l~k~--~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~agg-L~~GD~Il~vng~~v~~~~~~~ 81 (107)
T 1uhp_A 5 SSGKSLTLVLHRD--SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGG-LQIHDRIIEVNGRDLSRATHDQ 81 (107)
T ss_dssp CSSEEEEEEECCS--SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTC-CCSSCEEEEETTEECTTCCHHH
T ss_pred cCcEEEEEEEEeC--CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCC-CCCCCEEEEECCEECCCCCHHH
Confidence 3567889999987 68999999987643 2468999999999999999 7 9999999999999999999888
Q ss_pred HHHHhh-CCCCeEEEEEecC
Q psy6405 119 SLAILK-RGPPVEITLIKDG 137 (548)
Q Consensus 119 aV~~lk-~g~~VtVtV~RdG 137 (548)
++..++ .+..+.++|.|.+
T Consensus 82 ~~~~~~~~~~~v~l~v~R~~ 101 (107)
T 1uhp_A 82 AVEAFKTAKEPIVVQVLRRT 101 (107)
T ss_dssp HHHHHHHCCSSEEEEEEECC
T ss_pred HHHHHHcCCCcEEEEEEeCC
Confidence 765554 5778999988854
No 31
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.25 E-value=4e-11 Score=99.90 Aligned_cols=86 Identities=29% Similarity=0.543 Sum_probs=72.1
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCC
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGP 127 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~ 127 (548)
.+.++|.+.|. +..+|||++.++.+ ..+++|..|.++|||+++|+|++||+|++|||+++.++++.++...++ .+.
T Consensus 3 ~~~~~v~l~k~-~~~~lG~~~~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 79 (92)
T 2qg1_A 3 SDTLTIGLQKK-PGKGLGLSIVGKRN--DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLG 79 (92)
T ss_dssp -CEEEEEEECC-TTSCCSEEEECCSS--SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred ceEEEEEEEeC-CCCcccEEEEeccC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 45788999987 37899999997654 358999999999999999999999999999999999988777655444 567
Q ss_pred CeEEEEEecC
Q psy6405 128 PVEITLIKDG 137 (548)
Q Consensus 128 ~VtVtV~RdG 137 (548)
.+.++|.|.+
T Consensus 80 ~v~l~v~R~~ 89 (92)
T 2qg1_A 80 TVTLEVGRIS 89 (92)
T ss_dssp EEEEEEECCC
T ss_pred eEEEEEEccc
Confidence 7889998865
No 32
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.24 E-value=4e-11 Score=104.94 Aligned_cols=94 Identities=41% Similarity=0.713 Sum_probs=76.8
Q ss_pred CCCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh--
Q psy6405 47 GTSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-- 124 (548)
Q Consensus 47 ~~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-- 124 (548)
...+.+.+.+.+. ...+|||++.++.+....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++
T Consensus 12 ~~~~~~~v~l~~~-~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~ 90 (119)
T 1x6d_A 12 QLDGIHVTILHKE-EGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQA 90 (119)
T ss_dssp SCTTEEEEEEECC-TTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHT
T ss_pred CCCCeEEEEEEeC-CCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3566788888887 3789999999887655568999999999999999999999999999999999988888765553
Q ss_pred CCCCeEEEEEecCccee
Q psy6405 125 RGPPVEITLIKDGAGLG 141 (548)
Q Consensus 125 ~g~~VtVtV~RdGkgLG 141 (548)
.+..+.+++.|++....
T Consensus 91 ~~~~~~l~v~R~~~~~~ 107 (119)
T 1x6d_A 91 REPRQAVIVTRKLTPEA 107 (119)
T ss_dssp TSSSEEEEEEECCCSSS
T ss_pred CCCeEEEEEEcCCCccc
Confidence 34456678888766543
No 33
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.24 E-value=3.9e-11 Score=101.13 Aligned_cols=87 Identities=29% Similarity=0.479 Sum_probs=71.7
Q ss_pred CeEEEEEeeCCCCCceEEEEEeCCCCCC-----CCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh
Q psy6405 50 EVSVVVLHRDLPGNSVGITLAGGSDYES-----KEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK 124 (548)
Q Consensus 50 d~~tV~L~Kd~~~~GLGfsIagG~d~~~-----~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk 124 (548)
.++++.+.|. ...+|||++.++.+... .+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..+.
T Consensus 5 ~~~~v~l~k~-~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 83 (98)
T 1ihj_A 5 LIHMVTLDKT-GKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIK 83 (98)
T ss_dssp EEEEEEEECT-TSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred eEEEEEEEeC-CCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 4678999996 37899999998765432 37999999999999999999999999999999999997776544333
Q ss_pred -CCCCeEEEEEecC
Q psy6405 125 -RGPPVEITLIKDG 137 (548)
Q Consensus 125 -~g~~VtVtV~RdG 137 (548)
++..+.++|.|++
T Consensus 84 ~~g~~v~l~v~R~g 97 (98)
T 1ihj_A 84 EADFKIELEIQTFD 97 (98)
T ss_dssp HSCSEEEEEEEEC-
T ss_pred cCCCeEEEEEEeCC
Confidence 6788999999875
No 34
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=3.6e-11 Score=105.85 Aligned_cols=89 Identities=36% Similarity=0.568 Sum_probs=74.9
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCC----CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHh
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYE----SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAIL 123 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~----~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~l 123 (548)
..+++.|.+.+. ..+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..+
T Consensus 22 ~~~~~~v~l~k~--~~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 99 (117)
T 2byg_A 22 SMTVVEIKLFKG--PKGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAIL 99 (117)
T ss_dssp EEEEEEEEEECB--TTBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCceEEEEEEeC--CCCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 346788888887 489999999886532 35799999999999999999999999999999999999888877666
Q ss_pred h-CCCCeEEEEEecCc
Q psy6405 124 K-RGPPVEITLIKDGA 138 (548)
Q Consensus 124 k-~g~~VtVtV~RdGk 138 (548)
+ .+..+.|+|.|++.
T Consensus 100 ~~~g~~v~l~v~R~~~ 115 (117)
T 2byg_A 100 KNTSEVVYLKVGKPTT 115 (117)
T ss_dssp HTCCSEEEEEEEEEEE
T ss_pred HcCCCeEEEEEEeCCc
Confidence 5 46778899988754
No 35
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.24 E-value=2.7e-11 Score=101.93 Aligned_cols=90 Identities=24% Similarity=0.442 Sum_probs=72.8
Q ss_pred CeEEEEEeeCCCCCceEEEEEeCCCC-CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCC
Q psy6405 50 EVSVVVLHRDLPGNSVGITLAGGSDY-ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGP 127 (548)
Q Consensus 50 d~~tV~L~Kd~~~~GLGfsIagG~d~-~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~ 127 (548)
.+++|.+.|. ..+|||++.+..+. ...+++|..|.++|||+++| |++||+|++|||+++.++++.++...+. .+.
T Consensus 3 ~~r~v~l~k~--~~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 79 (96)
T 2v90_A 3 KPRCLHLEKG--PQGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQGS 79 (96)
T ss_dssp CCEEEEEECB--TTBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred CCEEEEEEeC--CCcccEEEEeccCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 5789999998 57999999874322 12479999999999999999 9999999999999999987777655444 377
Q ss_pred CeEEEEEecCcceeE
Q psy6405 128 PVEITLIKDGAGLGF 142 (548)
Q Consensus 128 ~VtVtV~RdGkgLGf 142 (548)
.+.++|.|++....+
T Consensus 80 ~v~l~v~r~~~~~~~ 94 (96)
T 2v90_A 80 CVSLTVVDPEADRET 94 (96)
T ss_dssp EEEEEEECCCTTSCC
T ss_pred EEEEEEECCCCcccc
Confidence 899999998765433
No 36
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.23 E-value=5.6e-11 Score=101.99 Aligned_cols=92 Identities=29% Similarity=0.520 Sum_probs=74.3
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCC----CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHh
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDY----ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAIL 123 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~----~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~l 123 (548)
+.+.+.+.+.+.....+|||++.++.+. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..+
T Consensus 10 ~~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 89 (108)
T 2jre_A 10 GFSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVL 89 (108)
T ss_dssp SCEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHH
T ss_pred CcEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4567788886433589999999987543 235899999999999999999999999999999999998777765444
Q ss_pred h-CCCCeEEEEEecCcc
Q psy6405 124 K-RGPPVEITLIKDGAG 139 (548)
Q Consensus 124 k-~g~~VtVtV~RdGkg 139 (548)
. .+..+.++|.|.+..
T Consensus 90 ~~~g~~v~l~v~R~~~~ 106 (108)
T 2jre_A 90 RNAGNPVRLLLIRRLPL 106 (108)
T ss_dssp HHHCSEEEEEEEECCCC
T ss_pred HcCCCeEEEEEEeCCcC
Confidence 3 577899999987654
No 37
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.23 E-value=3.8e-11 Score=102.86 Aligned_cols=89 Identities=31% Similarity=0.558 Sum_probs=74.7
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCC-----CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHH
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDY-----ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAI 122 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~-----~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~ 122 (548)
..+.+++.+.+. ..+|||++.++.+. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..
T Consensus 5 ~~~~~~v~l~~~--~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 82 (105)
T 1wha_A 5 SSGRHVACLARS--ERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSL 82 (105)
T ss_dssp CCEEEEEEECCC--TTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHH
T ss_pred CCeeEEEEEEeC--CCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 456678888887 57899999988752 24689999999999999999999999999999999999888887766
Q ss_pred hh-CCCCeEEEEEecCc
Q psy6405 123 LK-RGPPVEITLIKDGA 138 (548)
Q Consensus 123 lk-~g~~VtVtV~RdGk 138 (548)
++ .+..+.++|.|.+.
T Consensus 83 l~~~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 83 LTAASPTIALLLEREAG 99 (105)
T ss_dssp HTSCCSCEEEEEEECCC
T ss_pred HHcCCCeEEEEEEECCC
Confidence 65 36779999998654
No 38
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.23 E-value=1.8e-11 Score=106.07 Aligned_cols=90 Identities=23% Similarity=0.502 Sum_probs=73.8
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCC-CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh--
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDY-ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-- 124 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~-~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-- 124 (548)
..++++|+|.++ +..+|||++.++.+. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++
T Consensus 3 ~~~~~~v~l~k~-~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 81 (108)
T 3cbz_A 3 HMNIITVTLNME-KYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDI 81 (108)
T ss_dssp -CCEEEEEECHH-HHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHH
T ss_pred CceEEEEEEEeC-CCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 347889999986 368999999987543 2468999999999999999999999999999999999988888765553
Q ss_pred --CCCCeEEEEEecCc
Q psy6405 125 --RGPPVEITLIKDGA 138 (548)
Q Consensus 125 --~g~~VtVtV~RdGk 138 (548)
.+..+.++|.|.+.
T Consensus 82 ~~~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 82 VHKPGPIVLTVAKSGG 97 (108)
T ss_dssp HTSSSCEEEEEECCCC
T ss_pred ccCCCeEEEEEEeCCC
Confidence 23468999988654
No 39
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.23 E-value=5.5e-11 Score=101.92 Aligned_cols=89 Identities=36% Similarity=0.602 Sum_probs=74.6
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCC-----CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHH
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDY-----ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAI 122 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~-----~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~ 122 (548)
..++++|.+.|. ++.+|||++.++.+. ...+++|..|.++|||+ +| |++||+|++|||+++.++++..++..
T Consensus 5 ~~~~~~v~l~k~-~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~~ 81 (107)
T 2h2b_A 5 IWEQHTVTLHRA-PGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQQ 81 (107)
T ss_dssp CEEEEEEEEECB-TTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred cceeEEEEEEeC-CCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHHH
Confidence 356789999998 478999999987653 23589999999999999 99 99999999999999999988876544
Q ss_pred h-hCCCCeEEEEEecCcc
Q psy6405 123 L-KRGPPVEITLIKDGAG 139 (548)
Q Consensus 123 l-k~g~~VtVtV~RdGkg 139 (548)
. ..+..+.++|.|++..
T Consensus 82 ~~~~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 82 LRKSGKNAKITIRRKKGG 99 (107)
T ss_dssp HHTCCSEEEEEEEEESCC
T ss_pred hhCCCCEEEEEEEECCCC
Confidence 4 4678899999987754
No 40
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.22 E-value=7.3e-11 Score=101.78 Aligned_cols=89 Identities=27% Similarity=0.572 Sum_probs=74.5
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCC-----CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHH
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDY-----ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAI 122 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~-----~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~ 122 (548)
..+.+.+.+.+. ..+|||++.++.+. ...+++|..|.++|||+++| |++||+|++|||+++.++++.+++..
T Consensus 13 ~~~~~~~~l~~~--~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~ 89 (110)
T 1x5q_A 13 EEEELTLTILRQ--TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEA 89 (110)
T ss_dssp CCEEEEEEEECS--SSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CcceEEEEEecC--CCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHH
Confidence 345677888887 78999999987642 24689999999999999999 99999999999999999988876655
Q ss_pred hh-CCCCeEEEEEecCcc
Q psy6405 123 LK-RGPPVEITLIKDGAG 139 (548)
Q Consensus 123 lk-~g~~VtVtV~RdGkg 139 (548)
+. ++..+.|+|.|+++.
T Consensus 90 ~~~~g~~v~l~v~R~g~~ 107 (110)
T 1x5q_A 90 LRGAGTAVQMRVWRESGP 107 (110)
T ss_dssp HHSCCSEEEEEEEECSSC
T ss_pred hhCCCCeEEEEEEECCcc
Confidence 44 688899999998764
No 41
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.22 E-value=6.9e-11 Score=103.14 Aligned_cols=92 Identities=27% Similarity=0.517 Sum_probs=77.0
Q ss_pred CCCCCeEEEEEeeCCCCCceEEEEEeCCCCC--------CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHH
Q psy6405 46 PGTSEVSVVVLHRDLPGNSVGITLAGGSDYE--------SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHK 117 (548)
Q Consensus 46 ~~~~d~~tV~L~Kd~~~~GLGfsIagG~d~~--------~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~ 117 (548)
..+.++++|.|.|. +..+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.
T Consensus 11 ~~~~~~~~v~l~k~-~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~ 89 (117)
T 2ehr_A 11 SHWGPPRIVEIFRE-PNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHS 89 (117)
T ss_dssp SCBCCCEEEEECCC-SSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHH
T ss_pred ccCCCCEEEEEEeC-CCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 34567899999998 4789999999886532 35899999999999999999999999999999999999988
Q ss_pred HHHHHhh-CCCCeEEEEEecCc
Q psy6405 118 ESLAILK-RGPPVEITLIKDGA 138 (548)
Q Consensus 118 ~aV~~lk-~g~~VtVtV~RdGk 138 (548)
+++..++ .+..+.++|.|...
T Consensus 90 ~~~~~~~~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 90 EAVEAIKNAGNPVVFIVQSLSS 111 (117)
T ss_dssp HHHHHHHTSCSSEEEEECCBSC
T ss_pred HHHHHHHcCCCeEEEEEEECCC
Confidence 8765554 46788888887544
No 42
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.22 E-value=4.4e-11 Score=104.07 Aligned_cols=88 Identities=30% Similarity=0.611 Sum_probs=73.9
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RG 126 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g 126 (548)
..++++|.+.+. ..+|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++ .+
T Consensus 22 ~~~~~~v~l~~~--~~glG~~l~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g 98 (112)
T 2r4h_A 22 SMDFYTVELERG--AKGFGFSLRGGREY-NMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGG 98 (112)
T ss_dssp -CCEEEEEEECB--TTBTSEEEEECGGG-TCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTT
T ss_pred CCceEEEEEEcC--CCccCEEEeccccC-CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 577899999887 47899999987543 358999999999999999999999999999999999998887765554 56
Q ss_pred CCeEEEEEecCc
Q psy6405 127 PPVEITLIKDGA 138 (548)
Q Consensus 127 ~~VtVtV~RdGk 138 (548)
..+.++|.|++.
T Consensus 99 ~~v~l~v~R~~~ 110 (112)
T 2r4h_A 99 RRVRLFLKRGET 110 (112)
T ss_dssp TEEEEEEECCEE
T ss_pred CeEEEEEEeCCc
Confidence 778899988654
No 43
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.22 E-value=9.5e-11 Score=101.90 Aligned_cols=88 Identities=32% Similarity=0.643 Sum_probs=73.4
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCC-CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhC-
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYE-SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKR- 125 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~-~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~- 125 (548)
..+++.+.+.|. .+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++.
T Consensus 13 ~~~~~~v~l~k~---~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~ 89 (109)
T 1wi4_A 13 DPAFRVITVTKE---TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRA 89 (109)
T ss_dssp CTTEEEEEECCS---SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHS
T ss_pred CCcEEEEEEeCC---CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcc
Confidence 467888999875 69999999987643 2479999999999999999999999999999999999998887766542
Q ss_pred ----CCCeEEEEEecCc
Q psy6405 126 ----GPPVEITLIKDGA 138 (548)
Q Consensus 126 ----g~~VtVtV~RdGk 138 (548)
+.++.|++.|.+.
T Consensus 90 ~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 90 KLRSESPWEIAFIRSGP 106 (109)
T ss_dssp CCSSSSCEEEEEECCCC
T ss_pred ccCCCceEEEEEEeCCC
Confidence 5668888887654
No 44
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.22 E-value=2.8e-11 Score=104.92 Aligned_cols=97 Identities=29% Similarity=0.462 Sum_probs=78.5
Q ss_pred CCeEEEEEeeCCCCCceEEEEEe---CCCC--CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHh
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAG---GSDY--ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAIL 123 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIag---G~d~--~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~l 123 (548)
.+.+.|.+.+. ..+|||++.+ +.+. ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++..+
T Consensus 3 ~~~~~v~l~k~--~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 80 (113)
T 2g5m_B 3 MELFPVELEKD--SEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVL 80 (113)
T ss_dssp CEEEEEECCCC--SSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHH
T ss_pred eEEEEEEEEeC--CCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35677888876 5899999998 4332 235899999999999999999999999999999999998888765444
Q ss_pred h-CCCCeEEEEEecCcceeEEEecC
Q psy6405 124 K-RGPPVEITLIKDGAGLGFSLEGG 147 (548)
Q Consensus 124 k-~g~~VtVtV~RdGkgLGfSItgg 147 (548)
. .+..+.++|.|++....+++++.
T Consensus 81 ~~~g~~v~l~v~R~~~~~~~~v~p~ 105 (113)
T 2g5m_B 81 RNTKGRVRFMIGRERPGEQSEVAQL 105 (113)
T ss_dssp HHSCSSCEEEEEECCCCTTSSCSSC
T ss_pred hcCCCeEEEEEEeCCCCCcchhhhh
Confidence 3 57889999999887766666543
No 45
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.21 E-value=6e-11 Score=104.85 Aligned_cols=91 Identities=30% Similarity=0.543 Sum_probs=77.5
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHh-hCC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAIL-KRG 126 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~l-k~g 126 (548)
..+++.|.+.|. ..+|||++.++.+....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..+ ..+
T Consensus 23 ~~~~~~v~l~k~--~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~ 100 (124)
T 2daz_A 23 PGELHIIELEKD--KNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAP 100 (124)
T ss_dssp SSEEEEEEEECC--SSCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSC
T ss_pred CCceEEEEEEeC--CCccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 467889999987 68999999988765556899999999999999999999999999999999999888876555 346
Q ss_pred CCeEEEEEecCcce
Q psy6405 127 PPVEITLIKDGAGL 140 (548)
Q Consensus 127 ~~VtVtV~RdGkgL 140 (548)
..+.++|.|.+..+
T Consensus 101 ~~v~l~v~R~~~~~ 114 (124)
T 2daz_A 101 SKVKLVFIRNEDAV 114 (124)
T ss_dssp SEEEEEEEECTTHH
T ss_pred CeEEEEEEeCCCcc
Confidence 67899999977643
No 46
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.21 E-value=6.8e-11 Score=98.34 Aligned_cols=83 Identities=23% Similarity=0.411 Sum_probs=66.8
Q ss_pred CeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhC-CCC
Q psy6405 50 EVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKR-GPP 128 (548)
Q Consensus 50 d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~-g~~ 128 (548)
++++|.+.|. ..+|||++.++.+ ..+++|..|.++|||+++| |++||+|++|||.++.++++.+++..++. +..
T Consensus 3 ~~r~v~l~r~--~~g~G~~~~~~~~--~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 77 (91)
T 1g9o_A 3 LPRLCCLEKG--PNGYGFHLHGEKG--KLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAALNA 77 (91)
T ss_dssp CCEEEEEECB--TTBCCEEEEECTT--CSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSE
T ss_pred ccEEEEEEeC--CCcccEEEEecCC--CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCc
Confidence 5789999998 4799999998764 3589999999999999999 99999999999999999988887766653 233
Q ss_pred eE-EEEEecC
Q psy6405 129 VE-ITLIKDG 137 (548)
Q Consensus 129 Vt-VtV~RdG 137 (548)
+. +++.|++
T Consensus 78 ~~~~~~~r~~ 87 (91)
T 1g9o_A 78 VRLLVVDPET 87 (91)
T ss_dssp EEEEEECCCC
T ss_pred EEEEEEcCCc
Confidence 33 3344443
No 47
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.21 E-value=6.9e-11 Score=101.28 Aligned_cols=87 Identities=28% Similarity=0.497 Sum_probs=74.5
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhCCCC
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKRGPP 128 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~g~~ 128 (548)
..+++|.+.|. +..+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++..++.+..
T Consensus 14 ~~~~~v~l~k~-~~~~lG~~~~~~~~~-~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 90 (104)
T 1wi2_A 14 FLPRIVTLKKP-PGAQLGFNIRGGKAS-QLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKTARE 90 (104)
T ss_dssp SCCEEEEECCC-TTCCCSEEEECCSSS-CCCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHHSSS
T ss_pred CCCEEEEEEeC-CCCCccEEEEcccCC-CCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCE
Confidence 45789999998 368999999987643 3579999999999999999 99999999999999999888887776766888
Q ss_pred eEEEEEecCc
Q psy6405 129 VEITLIKDGA 138 (548)
Q Consensus 129 VtVtV~RdGk 138 (548)
+.|+|.|...
T Consensus 91 v~l~v~r~~~ 100 (104)
T 1wi2_A 91 ISMRVRFFSG 100 (104)
T ss_dssp EEEEEECCCC
T ss_pred EEEEEEECCC
Confidence 9999988543
No 48
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.21 E-value=7.1e-11 Score=102.03 Aligned_cols=87 Identities=22% Similarity=0.288 Sum_probs=74.1
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh---C
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK---R 125 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk---~ 125 (548)
++.+.|++.|. ..+|||+|+++ ..+.++|+.|.++|+|++.|+|++||+|++|||+++.+++|.+++..++ .
T Consensus 4 g~~k~V~l~K~--~~~LG~tI~~~---g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~ 78 (95)
T 3gge_A 4 GIEKEVNVYKS--EDSLGLTITDN---GVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKK 78 (95)
T ss_dssp EEEEEEEEECC--SSCCCEEEECS---SSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCT
T ss_pred CeEEEEEEEEC--CCCceEEEEcC---CCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCC
Confidence 56789999997 48999999953 2357899999999999999999999999999999999999999887665 4
Q ss_pred CCCeEEEEEecCcce
Q psy6405 126 GPPVEITLIKDGAGL 140 (548)
Q Consensus 126 g~~VtVtV~RdGkgL 140 (548)
+.++++.+.++.+.+
T Consensus 79 g~~~~L~lv~p~~~~ 93 (95)
T 3gge_A 79 EELFTMKLIEPKKSS 93 (95)
T ss_dssp TCEEEEEEEEECSCE
T ss_pred CCEEEEEEECccccc
Confidence 566888888766554
No 49
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.21 E-value=5.3e-11 Score=98.97 Aligned_cols=84 Identities=30% Similarity=0.506 Sum_probs=70.9
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhc-CCCCCCCEEEEECCeeccCccHHHHHHHhh-CC
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRD-GRLQKGDRILSINGKSMKGLTHKESLAILK-RG 126 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqA-GrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g 126 (548)
.++++|.+.|. +..+|||++.++.+. ..+++|..|.++|||+++ | |++||+|++|||+++.++++.+++..++ .+
T Consensus 3 ~~~~~v~l~k~-~~~~lG~~i~~~~~~-~~g~~V~~V~~~spA~~agg-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~ 79 (90)
T 1qav_A 3 LQRRRVTVRKA-DAGGLGISIKGGREN-KMPILISKIFKGLAADQTEA-LFVGDAILSVNGEDLSSATHDEAVQALKKTG 79 (90)
T ss_dssp SSCEEEEEECC-TTTCCCEEEEEEGGG-TEEEEEEEECTTSHHHHTTC-CCTTEEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred CccEEEEEEeC-CCCCcCEEEEcccCC-CCCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 46899999997 378999999987543 357999999999999999 7 9999999999999999998888766554 45
Q ss_pred CCeEEEEEe
Q psy6405 127 PPVEITLIK 135 (548)
Q Consensus 127 ~~VtVtV~R 135 (548)
..+.++|.|
T Consensus 80 ~~v~l~v~r 88 (90)
T 1qav_A 80 KEVVLEVKY 88 (90)
T ss_dssp SEEEEEEEE
T ss_pred CeEEEEEEE
Confidence 678888876
No 50
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.21 E-value=1.5e-11 Score=107.19 Aligned_cols=93 Identities=28% Similarity=0.497 Sum_probs=76.7
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCC--CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeecc-CccHHHHHHHhh
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYE--SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMK-GLTHKESLAILK 124 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~--~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~-~~s~~~aV~~lk 124 (548)
..+++.|.+.|. +..+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||.++. ++++.+++..++
T Consensus 18 ~~~~~~v~l~k~-~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~ 96 (117)
T 2o2t_A 18 GRHVEVFELLKP-PSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQ 96 (117)
T ss_dssp TSCEEEEEEECC-SSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHH
T ss_pred CCeEEEEEEEEC-CCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHH
Confidence 357899999987 4789999999775322 357999999999999999999999999999999998 888877665443
Q ss_pred -CCCCeEEEEEecCccee
Q psy6405 125 -RGPPVEITLIKDGAGLG 141 (548)
Q Consensus 125 -~g~~VtVtV~RdGkgLG 141 (548)
.+..+.++|.|++....
T Consensus 97 ~~~~~v~l~v~R~~~~~~ 114 (117)
T 2o2t_A 97 KAKDTVQLVIARGSLPQY 114 (117)
T ss_dssp HCCSEEEEEEESSCCGGG
T ss_pred cCCCEEEEEEEeCCccee
Confidence 57789999999876544
No 51
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.21 E-value=6.1e-11 Score=102.42 Aligned_cols=88 Identities=25% Similarity=0.399 Sum_probs=73.3
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCC---CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDY---ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK 124 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~---~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk 124 (548)
..++++|.+.|. ..+|||++.++.+. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++
T Consensus 13 ~~~~~~v~l~k~--~~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 90 (108)
T 2d92_A 13 SPEVKIVELVKD--CKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILK 90 (108)
T ss_dssp CSSCEEEEEEEC--SSCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHH
T ss_pred CCceEEEEEEEC--CCccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 456799999998 47999999986542 2357999999999999999999999999999999999998888776665
Q ss_pred C--CCCeEEEEEecC
Q psy6405 125 R--GPPVEITLIKDG 137 (548)
Q Consensus 125 ~--g~~VtVtV~RdG 137 (548)
. +..+.++|.|..
T Consensus 91 ~~~~~~v~l~v~R~~ 105 (108)
T 2d92_A 91 AVPPGLVHLGICSGP 105 (108)
T ss_dssp HSCSEEEEEEEECCC
T ss_pred hCCCCeEEEEEEcCC
Confidence 4 456888888753
No 52
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.20 E-value=1.3e-10 Score=97.64 Aligned_cols=91 Identities=26% Similarity=0.469 Sum_probs=78.9
Q ss_pred hCCCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc
Q psy6405 124 KRGPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL 203 (548)
Q Consensus 124 k~g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~ 203 (548)
+++..++|.+.|.+.++||++.++........+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..
T Consensus 2 ~~g~~~~v~l~k~~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 81 (96)
T 1d5g_A 2 KPGDIFEVELAKNDNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNT 81 (96)
T ss_dssp CTTCEEEEEEECSSSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSC
T ss_pred CCCCEEEEEEEeCCCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 35778899999999999999998765433345799999999999999999999999999999999999999999999874
Q ss_pred CCCceeEEEEec
Q psy6405 204 NDGTIQDIKALG 215 (548)
Q Consensus 204 ~g~~V~LlV~Ri 215 (548)
+..+.+.+.|.
T Consensus 82 -g~~v~l~v~R~ 92 (96)
T 1d5g_A 82 -GQVVHLLLEKG 92 (96)
T ss_dssp -CSEEEEEEECC
T ss_pred -CCeEEEEEEcC
Confidence 67888888774
No 53
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=6.1e-11 Score=101.13 Aligned_cols=89 Identities=34% Similarity=0.561 Sum_probs=74.2
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCC-CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-C
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYE-SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-R 125 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~-~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~ 125 (548)
..+.+++.+.+. ..+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++ .
T Consensus 9 ~~~~~~v~l~~~--~~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 86 (104)
T 2djt_A 9 ASGHFSVELVRG--YAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAG 86 (104)
T ss_dssp CCCCEEEEEECC--SSSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHT
T ss_pred CCceEEEEEEeC--CCCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 456788999987 589999999865431 357999999999999999999999999999999999998777665544 5
Q ss_pred CCCeEEEEEecCc
Q psy6405 126 GPPVEITLIKDGA 138 (548)
Q Consensus 126 g~~VtVtV~RdGk 138 (548)
+..+.|+|.|++.
T Consensus 87 g~~v~l~v~R~g~ 99 (104)
T 2djt_A 87 GPQLHLVIRRPLS 99 (104)
T ss_dssp CSEEEEEECCCCC
T ss_pred CCeEEEEEEECCC
Confidence 7788999988765
No 54
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.20 E-value=8.5e-11 Score=104.05 Aligned_cols=89 Identities=30% Similarity=0.543 Sum_probs=74.1
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCC--CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDY--ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK- 124 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~--~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk- 124 (548)
..+.+.|.+.+. +..+|||++.++.+. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++
T Consensus 22 ~~~~~~v~l~k~-~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 100 (118)
T 3b76_A 22 SMHEKVVNIQKD-PGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKR 100 (118)
T ss_dssp EEEEEEEEEECC-TTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHS
T ss_pred CCCcEEEEEEeC-CCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 455788888876 478999999988642 2357999999999999999999999999999999999999998876665
Q ss_pred CCCCeEEEEEecC
Q psy6405 125 RGPPVEITLIKDG 137 (548)
Q Consensus 125 ~g~~VtVtV~RdG 137 (548)
.+..+.++|.|..
T Consensus 101 ~~~~v~L~v~R~~ 113 (118)
T 3b76_A 101 TSSSIVLKALEVK 113 (118)
T ss_dssp CCSEEEEEEEEEE
T ss_pred CCCeEEEEEEECC
Confidence 3566888888743
No 55
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=6.7e-11 Score=103.83 Aligned_cols=93 Identities=28% Similarity=0.493 Sum_probs=76.9
Q ss_pred CCCCCCCeEEEEEeeCCCCCceEEEEEeCCCC----CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHH
Q psy6405 44 LIPGTSEVSVVVLHRDLPGNSVGITLAGGSDY----ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKES 119 (548)
Q Consensus 44 ml~~~~d~~tV~L~Kd~~~~GLGfsIagG~d~----~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~a 119 (548)
.......++.|.|.|. ..+|||++.++.+. ...+++|..|.++|||+++|+|++||+|++|||++|.++++.++
T Consensus 11 ~~~~~~~~~~v~l~r~--~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~ 88 (120)
T 2eno_A 11 RVDYLVTEEEINLTRG--PSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDA 88 (120)
T ss_dssp CCCEEEEEEEEEEECC--SSSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHH
T ss_pred CCCCCCceEEEEEEEC--CCCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHH
Confidence 3334556788999988 48999999987654 24689999999999999999999999999999999999988776
Q ss_pred HHHhh-CCCCeEEEEEecCc
Q psy6405 120 LAILK-RGPPVEITLIKDGA 138 (548)
Q Consensus 120 V~~lk-~g~~VtVtV~RdGk 138 (548)
+..++ .+..+.++|.|.+.
T Consensus 89 ~~~~~~~g~~v~l~v~R~~~ 108 (120)
T 2eno_A 89 VDLFRNAGYAVSLRVQHRLQ 108 (120)
T ss_dssp HHHHHHHCSEEEEEEEEEEE
T ss_pred HHHHHcCCCeEEEEEEeCCc
Confidence 65544 46788999998655
No 56
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.20 E-value=1.2e-10 Score=98.19 Aligned_cols=89 Identities=31% Similarity=0.521 Sum_probs=72.7
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RG 126 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g 126 (548)
..+.++|.+.+. ..+|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++ .+
T Consensus 3 ~~~~~~v~l~~~--~~~lG~~i~~~~~~-~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g 79 (97)
T 1n7e_A 3 GAIIYTVELKRY--GGPLGITISGTEEP-FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAG 79 (97)
T ss_dssp CCCEEEEEEECT--TSCCCEEEECCSST-TSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred CceEEEEEEEeC--CCCcCEEEEcccCC-CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 356788888765 67799999976532 358999999999999999999999999999999999988777665553 56
Q ss_pred CCeEEEEEecCcc
Q psy6405 127 PPVEITLIKDGAG 139 (548)
Q Consensus 127 ~~VtVtV~RdGkg 139 (548)
..+.++|.|++..
T Consensus 80 ~~v~l~v~R~~~~ 92 (97)
T 1n7e_A 80 ETVTLKIKKQTDA 92 (97)
T ss_dssp SEEEEEEECCCCC
T ss_pred CeEEEEEEeCCCC
Confidence 7788999887653
No 57
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.20 E-value=7.6e-11 Score=97.84 Aligned_cols=84 Identities=24% Similarity=0.487 Sum_probs=69.3
Q ss_pred CeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh---CC
Q psy6405 50 EVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK---RG 126 (548)
Q Consensus 50 d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk---~g 126 (548)
..++|.+.+. ..+|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++..+. .+
T Consensus 2 ~~~~v~l~~~--~~g~G~~~~~g~~~-~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 78 (90)
T 2q9v_A 2 MEQDIFLWRK--ETGFGFRILGGNEP-GEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQ 78 (90)
T ss_dssp EEEEEEEECB--TTBCCEEEEECSST-TSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHH
T ss_pred CcEEEEEEEC--CCccCEEEEccccC-CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 3578889888 58899999987654 346999999999999999999999999999999998888877654443 24
Q ss_pred CCeEEEEEec
Q psy6405 127 PPVEITLIKD 136 (548)
Q Consensus 127 ~~VtVtV~Rd 136 (548)
..+.++|.|.
T Consensus 79 ~~v~l~v~R~ 88 (90)
T 2q9v_A 79 GHVNLTVRQT 88 (90)
T ss_dssp TEEEEEEEEC
T ss_pred CeEEEEEEec
Confidence 4788888875
No 58
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.20 E-value=7.1e-11 Score=99.06 Aligned_cols=77 Identities=27% Similarity=0.530 Sum_probs=65.8
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCC
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGP 127 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~ 127 (548)
.++++|.|.|+ +.++|||++.++ .|..|.++|||+++| |++||+|++|||+++.++++.+++..++ .+.
T Consensus 3 ~~~r~v~l~k~-~~g~~Gf~i~~g--------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~g~ 72 (82)
T 1r6j_A 3 MDPRTITMHKD-STGHVGFIFKNG--------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGT 72 (82)
T ss_dssp TCCEEEEEECC-TTSCCCEEEETT--------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSCS
T ss_pred CceEEEEEEEC-CCCCeEEEEECC--------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Confidence 46799999998 367899999843 478999999999999 9999999999999999999999887665 456
Q ss_pred CeEEEEEe
Q psy6405 128 PVEITLIK 135 (548)
Q Consensus 128 ~VtVtV~R 135 (548)
.++++|..
T Consensus 73 ~V~L~v~p 80 (82)
T 1r6j_A 73 VVTITIMP 80 (82)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 67777753
No 59
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=8e-11 Score=98.39 Aligned_cols=83 Identities=22% Similarity=0.346 Sum_probs=67.9
Q ss_pred eEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhh-cCCCCCCCEEEEECCeeccCccHHHHHHHhhC-CCC
Q psy6405 51 VSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADR-DGRLQKGDRILSINGKSMKGLTHKESLAILKR-GPP 128 (548)
Q Consensus 51 ~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaq-AGrLq~GDrILaINGv~V~~~s~~~aV~~lk~-g~~ 128 (548)
++.|+|.|. ++.+|||++..+. .++++|..|.++|||++ +| |++||+|++|||+++.++++.+++..++. ..+
T Consensus 2 ~r~V~l~K~-~~~~lG~~i~~~~---~~~~~I~~V~~gspA~~~ag-L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~ 76 (88)
T 1kwa_A 2 SRLVQFQKN-TDEPMGITLKMNE---LNHCIVARIMHGGMIHRQGT-LHVGDEIREINGISVANQTVEQLQKMLREMRGS 76 (88)
T ss_dssp CEEEEEEEC-SSSCCCEEEECSC---GGGEEEEEECTTSHHHHHTC-CCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEE
T ss_pred eEEEEEEeC-CCCceeEEEEeCC---CCCEEEEEECCCCHHHHcCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCc
Confidence 578999998 4789999999642 25799999999999999 77 99999999999999998888887655542 226
Q ss_pred eEEEEEecCc
Q psy6405 129 VEITLIKDGA 138 (548)
Q Consensus 129 VtVtV~RdGk 138 (548)
+.++|.|.+.
T Consensus 77 v~l~v~r~~~ 86 (88)
T 1kwa_A 77 ITFKIVPSYR 86 (88)
T ss_dssp EEEEEECCCC
T ss_pred EEEEEECCcC
Confidence 7788877654
No 60
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.19 E-value=1.3e-10 Score=100.12 Aligned_cols=91 Identities=21% Similarity=0.408 Sum_probs=73.6
Q ss_pred CCCCeEEEEEeeCCCCCceEEEEEeCCCCC--CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh
Q psy6405 47 GTSEVSVVVLHRDLPGNSVGITLAGGSDYE--SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK 124 (548)
Q Consensus 47 ~~~d~~tV~L~Kd~~~~GLGfsIagG~d~~--~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk 124 (548)
...+.+.+.+.+. ..+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++
T Consensus 8 ~~~~~~~~~l~~~--~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~ 85 (111)
T 2koj_A 8 KVGKRLNIQLKKG--TEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLR 85 (111)
T ss_dssp SSCEEEEEEEECB--TTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred ccCcEEEEEEEEC--CCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3455677778776 689999999765421 257999999999999999999999999999999999988777665554
Q ss_pred ---CCCCeEEEEEecCcc
Q psy6405 125 ---RGPPVEITLIKDGAG 139 (548)
Q Consensus 125 ---~g~~VtVtV~RdGkg 139 (548)
.+..+.++|.|++..
T Consensus 86 ~~~~g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 86 STKMEGTVSLLVFRQEEA 103 (111)
T ss_dssp HCCCSSEEEEEEEECCCC
T ss_pred hCCCCCeEEEEEEeCCCC
Confidence 367889999987653
No 61
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.19 E-value=1.2e-10 Score=99.00 Aligned_cols=89 Identities=27% Similarity=0.474 Sum_probs=75.6
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhCCC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKRGP 127 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~g~ 127 (548)
...++++.+.+.. ...|||++..+.+. ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++..++.+.
T Consensus 8 ~~~~~~v~l~~~~-~~~lG~~~~~~~~~-~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~~ 84 (100)
T 2eeh_A 8 SDIIHSVRVEKSP-AGRLGFSVRGGSEH-GLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTSSS 84 (100)
T ss_dssp CCEECCEEECCCS-SSSCSEEEECCTTT-TCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHSCS
T ss_pred CCeEEEEEEEECC-CCCccEEEEccccC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcCCC
Confidence 3457788898873 56799999976543 3589999999999999999 9999999999999999998777777777889
Q ss_pred CeEEEEEecCcc
Q psy6405 128 PVEITLIKDGAG 139 (548)
Q Consensus 128 ~VtVtV~RdGkg 139 (548)
.+.|+|.|++..
T Consensus 85 ~v~l~v~R~g~~ 96 (100)
T 2eeh_A 85 RLHMMVRRMGSG 96 (100)
T ss_dssp SEEEEEEECSCC
T ss_pred EEEEEEEECCcC
Confidence 999999997753
No 62
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.18 E-value=2.5e-11 Score=101.30 Aligned_cols=85 Identities=21% Similarity=0.295 Sum_probs=68.2
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhC-CC
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKR-GP 127 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~-g~ 127 (548)
..+++|.+.|. ..+|||++.+..+ ..+++|..|.++|||+++| |++||+|++|||+++.+++..++...+.. +.
T Consensus 2 ~~pr~v~l~k~--~~~~G~~l~~~~~--~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 76 (91)
T 2vsp_A 2 MKPKLCRLAKG--ENGYGFHLNAIRG--LPGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGK 76 (91)
T ss_dssp CCEEEEEEECB--TTBTSCCCBCCTT--CSCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSCS
T ss_pred CCcEEEEEEeC--CCcccEEEEeccC--CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 36899999998 4589999986543 3578999999999999999 99999999999999997777776655543 77
Q ss_pred CeEEEEEecCc
Q psy6405 128 PVEITLIKDGA 138 (548)
Q Consensus 128 ~VtVtV~RdGk 138 (548)
.+.++|.|.+.
T Consensus 77 ~v~l~v~r~~~ 87 (91)
T 2vsp_A 77 NVTLLVCGKKA 87 (91)
T ss_dssp EEEEEEEC---
T ss_pred EEEEEEEeCCc
Confidence 89999988764
No 63
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.18 E-value=7.6e-11 Score=97.25 Aligned_cols=84 Identities=31% Similarity=0.609 Sum_probs=68.8
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhh-cCCCCCCCEEEEECCeeccCccHHHHHHHhh-CC
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADR-DGRLQKGDRILSINGKSMKGLTHKESLAILK-RG 126 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaq-AGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g 126 (548)
++++++.+.|+. ..+|||++.++.+. ..+++|..|.++|||++ +| |++||+|++|||+++.++++.+++..++ .+
T Consensus 1 g~~~~v~l~~~~-~~~lG~~i~~~~~~-~~~~~V~~V~~gspA~~~ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 77 (87)
T 4e34_A 1 GPIRKVLLLKED-HEGLGISITGGKEH-GVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQR 77 (87)
T ss_dssp CCCEEEEEECCT-TBCCCEEEEEEGGG-TEEEEEEEECTTSHHHHHSC-CCTTEEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CCEEEEEEEECC-CCcccEEEEccCCC-CCCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 367899999983 78999999987543 24699999999999999 68 9999999999999999998888765554 45
Q ss_pred CCeEEEEEe
Q psy6405 127 PPVEITLIK 135 (548)
Q Consensus 127 ~~VtVtV~R 135 (548)
..+.++|.+
T Consensus 78 ~~v~l~v~~ 86 (87)
T 4e34_A 78 GEIEFEVVY 86 (87)
T ss_dssp SEEEEEEEE
T ss_pred CeEEEEEEE
Confidence 567776653
No 64
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.18 E-value=1e-10 Score=96.69 Aligned_cols=82 Identities=28% Similarity=0.454 Sum_probs=67.4
Q ss_pred eEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCCCe
Q psy6405 51 VSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGPPV 129 (548)
Q Consensus 51 ~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~~V 129 (548)
.++|.+ +. ..+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++..+. .+..+
T Consensus 4 ~~~v~l-~~--~~~~G~~l~~g~~~-~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v 78 (88)
T 2uzc_A 4 NYSVSL-VG--PAPWGFRLQGGKDF-NMPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSL 78 (88)
T ss_dssp EEEEEE-ES--SSCCCEEEEEEGGG-TEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred EEEEEE-cC--CCcccEEEECcCCC-CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 566777 33 47899999987653 3579999999999999999 9999999999999999998777665544 46778
Q ss_pred EEEEEecC
Q psy6405 130 EITLIKDG 137 (548)
Q Consensus 130 tVtV~RdG 137 (548)
.++|.|++
T Consensus 79 ~l~v~R~g 86 (88)
T 2uzc_A 79 NMTLQRES 86 (88)
T ss_dssp EEEEECCC
T ss_pred EEEEEeCC
Confidence 89998865
No 65
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.18 E-value=9e-11 Score=97.36 Aligned_cols=82 Identities=28% Similarity=0.478 Sum_probs=66.7
Q ss_pred EEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCCCeE
Q psy6405 52 SVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGPPVE 130 (548)
Q Consensus 52 ~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~~Vt 130 (548)
.++.+.+ ..+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++..+. .+..+.
T Consensus 5 ~~v~~~~---~~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~ 79 (89)
T 2q3g_A 5 FKVVLEG---PAPWGFRLQGGKDF-NVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLS 79 (89)
T ss_dssp EEEEEES---SSCCCEEEEEEGGG-TEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEE
T ss_pred EEEEEcC---CCcccEEEECcCCC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEE
Confidence 4455543 47899999987653 3578999999999999999 9999999999999999988887665554 467788
Q ss_pred EEEEecCc
Q psy6405 131 ITLIKDGA 138 (548)
Q Consensus 131 VtV~RdGk 138 (548)
++|.|++.
T Consensus 80 l~v~R~~~ 87 (89)
T 2q3g_A 80 LGLSRAIT 87 (89)
T ss_dssp EEEEEECC
T ss_pred EEEEeCCC
Confidence 99988764
No 66
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.17 E-value=1.4e-10 Score=97.07 Aligned_cols=85 Identities=22% Similarity=0.451 Sum_probs=69.3
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RG 126 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g 126 (548)
+..++.+.+.|. ..+|||++.++. ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++..++ .+
T Consensus 2 ~~~~r~v~l~k~--~~~lG~~i~~~~--~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 77 (93)
T 3o46_A 2 SDSVKIIRLVKN--REPLGATIKKDE--QTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQ 77 (93)
T ss_dssp --CCEEEEEEES--SSCCCEEEEECT--TTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCC
T ss_pred CccEEEEEEEeC--CCCccEEEEecC--CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 356789999998 579999999762 2468999999999999999999999999999999999888888776654 34
Q ss_pred CCeEEEEEec
Q psy6405 127 PPVEITLIKD 136 (548)
Q Consensus 127 ~~VtVtV~Rd 136 (548)
..+.++|.|.
T Consensus 78 ~~v~l~v~~~ 87 (93)
T 3o46_A 78 GAITFKIIPG 87 (93)
T ss_dssp EEEEEEEECC
T ss_pred CeEEEEEEeC
Confidence 4677777764
No 67
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.17 E-value=1.2e-10 Score=99.87 Aligned_cols=88 Identities=27% Similarity=0.466 Sum_probs=70.2
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCC-----------CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccH
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYE-----------SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTH 116 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~-----------~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~ 116 (548)
+..++.|.+.|. ..+|||++.++.+.. ...++|..|.++|||+++| |++||+|++|||.++.++++
T Consensus 4 ~~~~r~v~l~k~--~~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 80 (107)
T 3qe1_A 4 GGSPRVVRIVKS--ESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATH 80 (107)
T ss_dssp --CCEEEEEECB--TTBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCH
T ss_pred CCCcEEEEEEEC--CCCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 467899999998 458999999874432 1234699999999999999 99999999999999998888
Q ss_pred HHHHHHhh-CCCCeEEEEEecCc
Q psy6405 117 KESLAILK-RGPPVEITLIKDGA 138 (548)
Q Consensus 117 ~~aV~~lk-~g~~VtVtV~RdGk 138 (548)
.+++..++ .+..+.++|.|.+.
T Consensus 81 ~~~~~~l~~~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 81 KQVVDLIRAGEKELILTVLSVES 103 (107)
T ss_dssp HHHHHHHHHCSSEEEEEEECSSC
T ss_pred HHHHHHHHcCCCEEEEEEEcCCC
Confidence 87665554 47788898888654
No 68
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.17 E-value=5.2e-11 Score=101.85 Aligned_cols=88 Identities=27% Similarity=0.446 Sum_probs=72.9
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhC--
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKR-- 125 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~-- 125 (548)
..+.+.+.+.+. ..+|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++.
T Consensus 7 ~~~~~~v~l~~~--~~g~G~~i~~g~~~-~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~ 83 (103)
T 1uep_A 7 GYKELDVHLRRM--ESGFGFRILGGDEP-GQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAA 83 (103)
T ss_dssp SEEEECCEEESS--SSSCCEEECCCCST-TSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHH
T ss_pred CceEEEEEEEeC--CCccCEEEeeecCC-CCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 345677788886 68999999987643 3579999999999999999999999999999999999888776655542
Q ss_pred -CCCeEEEEEecCc
Q psy6405 126 -GPPVEITLIKDGA 138 (548)
Q Consensus 126 -g~~VtVtV~RdGk 138 (548)
+..+.++|.|.+.
T Consensus 84 ~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 84 RNGQVNLTVRRKVL 97 (103)
T ss_dssp HHTEEEEEEEEECC
T ss_pred CCCcEEEEEEeCCC
Confidence 6789999998654
No 69
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.17 E-value=8.1e-11 Score=96.49 Aligned_cols=82 Identities=27% Similarity=0.460 Sum_probs=66.9
Q ss_pred eEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCCCe
Q psy6405 51 VSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGPPV 129 (548)
Q Consensus 51 ~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~~V 129 (548)
.++|.+.+ ..+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++..+. .+..+
T Consensus 2 ~~~v~l~~---~~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 76 (85)
T 1rgw_A 2 AYSVTLTG---PGPWGFRLQGGKDF-NMPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNL 76 (85)
T ss_dssp EEEEEECC---SSCCCEEECCCGGG-TSCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCE
T ss_pred cEEEEEeC---CCccCEEEEeccCC-CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeE
Confidence 35667743 37899999987654 3478999999999999999 9999999999999999998887765554 45678
Q ss_pred EEEEEecC
Q psy6405 130 EITLIKDG 137 (548)
Q Consensus 130 tVtV~RdG 137 (548)
.++|.|++
T Consensus 77 ~l~v~R~~ 84 (85)
T 1rgw_A 77 SLTLQKSK 84 (85)
T ss_dssp EEEEESCC
T ss_pred EEEEEeCC
Confidence 88888865
No 70
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.17 E-value=1.2e-10 Score=99.07 Aligned_cols=87 Identities=32% Similarity=0.588 Sum_probs=73.2
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RG 126 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g 126 (548)
..+++.|.+.|. ..+|||++.++.+ ..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++..+. .+
T Consensus 9 ~~~~~~v~l~k~--~~glG~~~~~~~~--~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 84 (104)
T 3i4w_A 9 PREPRRIVIHRG--STGLGFNIVGGEX--GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAG 84 (104)
T ss_dssp CSSCEEEEEECB--TTBTSEEEEECC---CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred CCccEEEEEEeC--CCccCEEEECCCC--CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 456789999998 5799999998754 358999999999999999999999999999999999998888665444 56
Q ss_pred CCeEEEEEecCc
Q psy6405 127 PPVEITLIKDGA 138 (548)
Q Consensus 127 ~~VtVtV~RdGk 138 (548)
..+.++|.|.+.
T Consensus 85 ~~v~l~v~r~~~ 96 (104)
T 3i4w_A 85 QTVTIIAQYKPE 96 (104)
T ss_dssp SEEEEEEEECHH
T ss_pred CeEEEEEEECcc
Confidence 778898888654
No 71
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.17 E-value=1.1e-10 Score=97.28 Aligned_cols=86 Identities=31% Similarity=0.583 Sum_probs=71.0
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCC
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGP 127 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~ 127 (548)
..+++|++.|. ..+|||++.++.+. ..+++|..|.++|||+++|.|++||+|++|||+++.++++.+++..+. .+.
T Consensus 4 ~~~r~v~l~k~--~~glG~~l~~~~~~-~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 80 (93)
T 2dkr_A 4 GSSGVVELPKT--DEGLGFNIMGGKEQ-NSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQG 80 (93)
T ss_dssp SCSCEEEEECC--TTCCCEEEECSSSS-SCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCS
T ss_pred CCCEEEEEEeC--CCCccEEEecccCC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 46788999987 69999999987543 358999999999999999449999999999999999988877765554 455
Q ss_pred CeEEEEEecC
Q psy6405 128 PVEITLIKDG 137 (548)
Q Consensus 128 ~VtVtV~RdG 137 (548)
.+.++|.|.+
T Consensus 81 ~v~l~v~r~~ 90 (93)
T 2dkr_A 81 SVKLVVRSGP 90 (93)
T ss_dssp EEEEEECCCC
T ss_pred cEEEEEEeCC
Confidence 6888888754
No 72
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=99.17 E-value=4e-10 Score=123.31 Aligned_cols=141 Identities=16% Similarity=0.209 Sum_probs=109.5
Q ss_pred CceEEEEEeCCC---------CCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCcc-----------HHHHHHH
Q psy6405 63 NSVGITLAGGSD---------YESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLT-----------HKESLAI 122 (548)
Q Consensus 63 ~GLGfsIagG~d---------~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s-----------~~~aV~~ 122 (548)
..||+.+..-.. ....+++|..|.++|||++ + |++||.|++|||++|.... ....+..
T Consensus 253 ~~LGv~~~~~~~~~~~~~~~l~~~~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~ 330 (539)
T 4fln_A 253 PCLGVLLQKLENPALRECLKVPTNEGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQ 330 (539)
T ss_dssp CBCCEEEEECCCHHHHHHHTCSSSBCEEEEEECTTSGGGG-T-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHT
T ss_pred eecceEEEecCCHHHHHhcCCCCcCceeeecccCCChHHh-C-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHc
Confidence 457777754211 0135899999999999985 5 9999999999999996543 2335666
Q ss_pred hhCCCCeEEEEEecCcceeEEEecCCCCC---------------------------------------------------
Q psy6405 123 LKRGPPVEITLIKDGAGLGFSLEGGKDSP--------------------------------------------------- 151 (548)
Q Consensus 123 lk~g~~VtVtV~RdGkgLGfSItgg~~s~--------------------------------------------------- 151 (548)
.++|+.++|+|.|+|+...++|+.+....
T Consensus 331 ~~~Gd~v~l~v~R~Gk~~~v~Vtl~~~~~~~~~~~~~~~p~~~~~~Gl~f~~Lt~~~~~~~~~~~~~~~l~~~~~~~~~~ 410 (539)
T 4fln_A 331 KFAGDIAEIGIIRAGEHKKVQVVLRPRVHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVAR 410 (539)
T ss_dssp SCTTCEEEEEEEETTEEEEEEEECBCCCCSSCSCTTSSCCCCCCSTTEEEEECCHHHHTTSCSSSSCHHHHHHHHHCCCS
T ss_pred CCCCCEEEEEEEECCEEEEEEEEEccCccccccccccCCCccccccceEEeeCCHHHHHhhcccccCceeeehhhhhhhc
Confidence 77899999999999998888776432110
Q ss_pred -CCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCce
Q psy6405 152 -FGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTI 208 (548)
Q Consensus 152 -lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V 208 (548)
-+..+++|+.|.++++|...| ++.||+|++|||++|.+.. ++.++++++++.-+
T Consensus 411 ~~~~~gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg~~V~s~~--~l~~~l~~~k~~~l 465 (539)
T 4fln_A 411 FRGEQIVILSQVLANEVNIGYE-DMNNQQVLKFNGIPIRNIH--HLAHLIDMCKDKYL 465 (539)
T ss_dssp STTCCCEEEEEECCCGGGTTCS-SCCSEEEEEETTEECCSHH--HHHHHHHTCCSSEE
T ss_pred cCCceEEEEEEecCCchhhhcC-CCCCCEEEeECCEEcCCHH--HHHHHHHHcCCCeE
Confidence 011368899999999999999 9999999999999999876 88899998855433
No 73
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.17 E-value=1.3e-10 Score=101.99 Aligned_cols=90 Identities=29% Similarity=0.438 Sum_probs=75.4
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RG 126 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g 126 (548)
...++.|.+.+. ...+|||++.++.+....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++ .+
T Consensus 13 ~~~~~~v~l~k~-~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g 91 (117)
T 1v62_A 13 ASGPLMVEIVKT-PGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASIS 91 (117)
T ss_dssp SSSSEEEEEECC-TTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCS
T ss_pred CCCcEEEEEEcC-CCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 456889999998 3689999999875533345999999999999999999999999999999999888888766554 56
Q ss_pred CCeEEEEEecCc
Q psy6405 127 PPVEITLIKDGA 138 (548)
Q Consensus 127 ~~VtVtV~RdGk 138 (548)
..+.++|.|.+.
T Consensus 92 ~~v~l~v~r~~~ 103 (117)
T 1v62_A 92 EKVRLEILPVPQ 103 (117)
T ss_dssp SEEEEEECCBTT
T ss_pred CeEEEEEEECCC
Confidence 778999988765
No 74
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.17 E-value=1e-10 Score=104.53 Aligned_cols=93 Identities=40% Similarity=0.688 Sum_probs=79.0
Q ss_pred CCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
....|++.|...++||+|.++.....+..+++|..|.++|||+++|.|++||+|++|||+++.++++.+++++|+...+.
T Consensus 29 ~~~~v~l~k~~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 108 (130)
T 1i16_A 29 TVCTVTLEKMSAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDG 108 (130)
T ss_dssp EEEEEEEETTSSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSS
T ss_pred cEEEEEEEcCCCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 34678888888999999998776433345799999999999999944999999999999999999999999999998777
Q ss_pred ceeEEEEeccccC
Q psy6405 207 TIQDIKALGYDLN 219 (548)
Q Consensus 207 ~V~LlV~RilDLr 219 (548)
.+.+++.|.....
T Consensus 109 ~v~l~v~r~~~~~ 121 (130)
T 1i16_A 109 PVTIVIRRKSLQS 121 (130)
T ss_dssp EEEEEEEEESSCC
T ss_pred eEEEEEEeCCCCC
Confidence 7999998874433
No 75
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.16 E-value=1.1e-10 Score=97.22 Aligned_cols=85 Identities=24% Similarity=0.393 Sum_probs=68.7
Q ss_pred eEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCCCe
Q psy6405 51 VSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGPPV 129 (548)
Q Consensus 51 ~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~~V 129 (548)
++.+.+.. ..+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||+++.++++.++...+. ++..+
T Consensus 4 ~~~v~~~~---~~~~G~~l~~~~~~-~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 78 (91)
T 2pkt_A 4 TQQIDLQG---PGPWGFRLVGGKDF-EQPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNL 78 (91)
T ss_dssp EEEEEEES---SSCCSEEEEEEGGG-TEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEE
T ss_pred cEEEEECC---CCCCCEEEEccCCC-CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 34555654 37899999987643 2578999999999999999 9999999999999999999776554443 57889
Q ss_pred EEEEEecCcce
Q psy6405 130 EITLIKDGAGL 140 (548)
Q Consensus 130 tVtV~RdGkgL 140 (548)
.++|.|++...
T Consensus 79 ~l~v~R~g~~~ 89 (91)
T 2pkt_A 79 TLTVARSEHES 89 (91)
T ss_dssp EEEEEEECCCC
T ss_pred EEEEEECCccc
Confidence 99999987654
No 76
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.16 E-value=7.3e-11 Score=100.47 Aligned_cols=87 Identities=26% Similarity=0.526 Sum_probs=72.2
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RG 126 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g 126 (548)
...+++|.+.|. ..+|||++.++.+ ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++..+. .+
T Consensus 4 ~~~~r~v~l~k~--~~g~G~~l~~~~~--~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 78 (102)
T 2d90_A 4 GSSGRVVVIKKG--SNGYGFYLRAGPE--QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGG 78 (102)
T ss_dssp CSSSEEEEEECC--SSSSSCEEEECSS--SSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHST
T ss_pred CCCCEEEEEeeC--CCCccEEEEeecC--CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 467899999997 5799999997543 3589999999999999999 9999999999999999987666654443 47
Q ss_pred CCeEEEEEecCcc
Q psy6405 127 PPVEITLIKDGAG 139 (548)
Q Consensus 127 ~~VtVtV~RdGkg 139 (548)
..+.++|.|.+..
T Consensus 79 ~~v~l~v~r~~~~ 91 (102)
T 2d90_A 79 DQTTLLVLDKEAE 91 (102)
T ss_dssp TEEEEEECSTTCC
T ss_pred CEEEEEEEECCCc
Confidence 7889999876543
No 77
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.16 E-value=8.9e-11 Score=104.59 Aligned_cols=91 Identities=19% Similarity=0.281 Sum_probs=74.9
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCC--------CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHH
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDY--------ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKES 119 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~--------~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~a 119 (548)
...++.|.+.|...+.+|||++.++.+. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.++
T Consensus 27 ~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~ 106 (128)
T 1nf3_C 27 PETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQV 106 (128)
T ss_dssp CTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHH
T ss_pred CCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHH
Confidence 4677899999985568999999976431 12479999999999999999889999999999999999888887
Q ss_pred HHHh-hCCCCeEEEEEecCc
Q psy6405 120 LAIL-KRGPPVEITLIKDGA 138 (548)
Q Consensus 120 V~~l-k~g~~VtVtV~RdGk 138 (548)
+..+ ..+..+.++|.|.+.
T Consensus 107 ~~~l~~~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 107 TDMMIANSRNLIITVRPANQ 126 (128)
T ss_dssp HHHHHHTTTSEEEEEECCCC
T ss_pred HHHHHcCCCeEEEEEEECCc
Confidence 6555 356779999988654
No 78
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.16 E-value=1.4e-10 Score=100.16 Aligned_cols=77 Identities=34% Similarity=0.627 Sum_probs=66.4
Q ss_pred CCceEEEEEeCCCCC----CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCCCeEEEEEec
Q psy6405 62 GNSVGITLAGGSDYE----SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGPPVEITLIKD 136 (548)
Q Consensus 62 ~~GLGfsIagG~d~~----~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~~VtVtV~Rd 136 (548)
..+|||++++|.+.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++ .+..+.++|.|+
T Consensus 12 ~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 91 (106)
T 4amh_A 12 SKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLKVAKP 91 (106)
T ss_dssp CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEEEECC
T ss_pred CCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeC
Confidence 789999999997653 247999999999999999999999999999999999998888765554 456789999997
Q ss_pred Cc
Q psy6405 137 GA 138 (548)
Q Consensus 137 Gk 138 (548)
+.
T Consensus 92 ~~ 93 (106)
T 4amh_A 92 GS 93 (106)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 79
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=1.3e-10 Score=99.93 Aligned_cols=90 Identities=37% Similarity=0.618 Sum_probs=74.7
Q ss_pred CCCeEEEEEeeCCCCCceEEEEE-----eCCCCC--CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHH
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLA-----GGSDYE--SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESL 120 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIa-----gG~d~~--~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV 120 (548)
..+.++|.+.+. ..+|||++. ++.+.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++
T Consensus 7 ~~~~~~v~l~k~--~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~ 84 (108)
T 1q7x_A 7 PGDIFEVELAKN--DNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAV 84 (108)
T ss_dssp SSSEEEEEEESS--SCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHH
T ss_pred CCcEEEEEEEEC--CCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 567899999987 589999999 765532 46899999999999999999999999999999999988777765
Q ss_pred HHhh-CCCCeEEEEEecCcc
Q psy6405 121 AILK-RGPPVEITLIKDGAG 139 (548)
Q Consensus 121 ~~lk-~g~~VtVtV~RdGkg 139 (548)
..+. .+..+.++|.|++..
T Consensus 85 ~~~~~~g~~v~l~v~R~~~~ 104 (108)
T 1q7x_A 85 ETLRNTGQVVHLLLEKGQSP 104 (108)
T ss_dssp HHHHHTTSEEEEEEECCCCS
T ss_pred HHHHcCCCeEEEEEEeCCcc
Confidence 4443 567889999987654
No 80
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.16 E-value=1.7e-10 Score=98.86 Aligned_cols=89 Identities=30% Similarity=0.566 Sum_probs=71.9
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCC--CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDY--ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK- 124 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~--~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk- 124 (548)
..+..++.+ +. ..+|||++.++.+. ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++..++
T Consensus 9 ~~~~~~v~l-~~--~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~ 85 (106)
T 3axa_A 9 EPEIITVTL-KK--QNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTR 85 (106)
T ss_dssp -CCEEEEEE-EC--SSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CceEEEEEE-CC--CCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 455677777 54 68999999875432 2358999999999999999999999999999999999988888765553
Q ss_pred CCCCeEEEEEecCcc
Q psy6405 125 RGPPVEITLIKDGAG 139 (548)
Q Consensus 125 ~g~~VtVtV~RdGkg 139 (548)
.+..+.++|.|.+..
T Consensus 86 ~g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 86 TSSVVTLEVAKQGAI 100 (106)
T ss_dssp CCSEEEEEEECCCSS
T ss_pred CCCeEEEEEEeCCcc
Confidence 577899999987653
No 81
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=2.3e-10 Score=101.14 Aligned_cols=87 Identities=26% Similarity=0.485 Sum_probs=73.4
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhC--
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKR-- 125 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~-- 125 (548)
..+.++|.+.+. ..+|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++.
T Consensus 17 ~~~~~~v~l~~~--~~glG~~~~~g~~~-~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 93 (123)
T 1ueq_A 17 KGTFLSTTLKKS--NMGFGFTIIGGDEP-DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVP 93 (123)
T ss_dssp CSEEEEEEEECC--TTSCSEEEECCSSS-SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSC
T ss_pred CCcEEEEEEEeC--CCceeEEEecccCC-CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 456788888887 68999999987642 3579999999999999999999999999999999999888887655543
Q ss_pred -CCCeEEEEEecC
Q psy6405 126 -GPPVEITLIKDG 137 (548)
Q Consensus 126 -g~~VtVtV~RdG 137 (548)
+..+.|+|.|++
T Consensus 94 ~g~~v~l~v~R~~ 106 (123)
T 1ueq_A 94 IGQSVNLVLCRGY 106 (123)
T ss_dssp TTCEEEEEEEESC
T ss_pred CCCeEEEEEEeCC
Confidence 678999999865
No 82
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=1.3e-10 Score=99.95 Aligned_cols=89 Identities=31% Similarity=0.516 Sum_probs=72.8
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEe---CCCC--CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHH
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAG---GSDY--ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAI 122 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIag---G~d~--~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~ 122 (548)
..+.+.|.+.+. ..+|||++.+ +.+. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..
T Consensus 7 ~~~~~~v~l~k~--~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 84 (107)
T 1wf8_A 7 GLELFPVELEKD--EDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATV 84 (107)
T ss_dssp CEEEEEEEEECB--TTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHH
T ss_pred CceEEEEEEEEC--CCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 345678888887 5799999998 4432 23589999999999999999999999999999999999988886654
Q ss_pred hh-CCCCeEEEEEecCc
Q psy6405 123 LK-RGPPVEITLIKDGA 138 (548)
Q Consensus 123 lk-~g~~VtVtV~RdGk 138 (548)
++ .+..+.++|.|.+.
T Consensus 85 ~~~~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 85 LRNTKGNVRFVIGREKP 101 (107)
T ss_dssp HHHCCSEEEEEEEEECC
T ss_pred HhcCCCeEEEEEEeCCC
Confidence 43 57789999988654
No 83
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.16 E-value=5e-11 Score=101.80 Aligned_cols=94 Identities=27% Similarity=0.382 Sum_probs=76.6
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RG 126 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g 126 (548)
.++.++|.+.. ..+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++..+. .+
T Consensus 3 ~g~~~~v~l~~---~~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g 77 (103)
T 1wf7_A 3 SGSSGSVSLVG---PAPWGFRLQGGKDF-NMPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKACT 77 (103)
T ss_dssp CCCCEEEEEES---SSCCSCCEEEETTT-TEEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHCS
T ss_pred CCCEEEEEEeC---CCccCEEEeccccC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 46678888873 47899999988754 3468999999999999999 9999999999999999998777654443 46
Q ss_pred CCeEEEEEecCcceeEEEec
Q psy6405 127 PPVEITLIKDGAGLGFSLEG 146 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItg 146 (548)
..+.++|.|++....+++++
T Consensus 78 ~~v~l~v~R~g~~~~~~v~p 97 (103)
T 1wf7_A 78 GSLNMTLQRASAAAKSEPVS 97 (103)
T ss_dssp SEEEEEECCCSCCCCCCCCC
T ss_pred CeEEEEEEeCCCcCCCCCCC
Confidence 77899999988776666654
No 84
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=9.6e-11 Score=101.00 Aligned_cols=86 Identities=21% Similarity=0.413 Sum_probs=70.0
Q ss_pred CeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-----
Q psy6405 50 EVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK----- 124 (548)
Q Consensus 50 d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk----- 124 (548)
..+.|.+.+. ..+|||++.++.+.....++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++
T Consensus 6 ~~~~v~l~k~--~~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 83 (103)
T 1ufx_A 6 SGTLVRVKKS--AATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKT 83 (103)
T ss_dssp SSEEEEEECC--SSSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHC
T ss_pred ceEEEEEEcC--CCcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhccc
Confidence 4577888765 689999999987654444599999999999999999999999999999999999888765554
Q ss_pred -CCCCeEEEEEecC
Q psy6405 125 -RGPPVEITLIKDG 137 (548)
Q Consensus 125 -~g~~VtVtV~RdG 137 (548)
.+.++.++|.|.+
T Consensus 84 ~~~~~i~l~v~r~~ 97 (103)
T 1ufx_A 84 KDRDYIDFLVTEFN 97 (103)
T ss_dssp SSCSEEEEEECCCC
T ss_pred CCCCeEEEEEEEcc
Confidence 3556777777643
No 85
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.16 E-value=2e-10 Score=94.29 Aligned_cols=81 Identities=26% Similarity=0.532 Sum_probs=66.0
Q ss_pred EEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhC---CCC
Q psy6405 52 SVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKR---GPP 128 (548)
Q Consensus 52 ~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~---g~~ 128 (548)
.++.+.|. ..+|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.++...+.. +..
T Consensus 2 ~~v~l~k~--~~g~G~~i~~~~~~-~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~ 78 (85)
T 2i04_A 2 IHTKLRKS--SRGFGFTVVGGDEP-DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGAS 78 (85)
T ss_dssp EEEEEECB--TTBSSEEEEECCST-TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCE
T ss_pred EEEEEEEC--CCCCCEEEEcccCC-CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCe
Confidence 35777776 57999999986542 3579999999999999999999999999999999999887776555442 567
Q ss_pred eEEEEEe
Q psy6405 129 VEITLIK 135 (548)
Q Consensus 129 VtVtV~R 135 (548)
+.++|.|
T Consensus 79 v~l~v~R 85 (85)
T 2i04_A 79 VDLELCR 85 (85)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 7787765
No 86
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.15 E-value=1.8e-10 Score=95.14 Aligned_cols=83 Identities=27% Similarity=0.446 Sum_probs=66.1
Q ss_pred EEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhC-CCCeEE
Q psy6405 53 VVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKR-GPPVEI 131 (548)
Q Consensus 53 tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~-g~~VtV 131 (548)
++.+.+.. ..+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||+++.++++.++...+.. ...+.+
T Consensus 3 ~~~v~~~~-~~~lG~~l~~~~~~-~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l 79 (87)
T 2pa1_A 3 ALTVDVAG-PAPWGFRITGGRDF-HTPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRL 79 (87)
T ss_dssp EEEEEECS-SSCCSEEEEEEGGG-TEEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEE
T ss_pred EEEEEECC-CCccCEEEecccCC-CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 34455543 57999999987653 3579999999999999999 99999999999999999777766554443 268899
Q ss_pred EEEecCc
Q psy6405 132 TLIKDGA 138 (548)
Q Consensus 132 tV~RdGk 138 (548)
+|.|++.
T Consensus 80 ~v~R~~~ 86 (87)
T 2pa1_A 80 QLDRITS 86 (87)
T ss_dssp EEEECCC
T ss_pred EEEecCC
Confidence 9998763
No 87
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.15 E-value=1e-10 Score=104.59 Aligned_cols=89 Identities=29% Similarity=0.564 Sum_probs=73.7
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCC--CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDY--ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKR 125 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~--~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~ 125 (548)
..+++.|.+.|. ..+|||++.++.+. ...+++|..|.++|||+++|.|++||+|++|||+++.++++.+++..++.
T Consensus 27 ~~~~~~v~l~k~--~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 104 (130)
T 1i16_A 27 EATVCTVTLEKM--SAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKA 104 (130)
T ss_dssp SEEEEEEEEETT--SSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHT
T ss_pred CCcEEEEEEEcC--CCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 456788899887 68999999988753 23579999999999999993399999999999999999999998877764
Q ss_pred --CCCeEEEEEecCc
Q psy6405 126 --GPPVEITLIKDGA 138 (548)
Q Consensus 126 --g~~VtVtV~RdGk 138 (548)
+..+.++|.|.+.
T Consensus 105 ~~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 105 LPDGPVTIVIRRKSL 119 (130)
T ss_dssp SCSSEEEEEEEEESS
T ss_pred CCCceEEEEEEeCCC
Confidence 3458888888643
No 88
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.15 E-value=2.1e-10 Score=103.14 Aligned_cols=88 Identities=19% Similarity=0.348 Sum_probs=72.5
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCC-----------CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccH
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYE-----------SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTH 116 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~-----------~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~ 116 (548)
....++|.+.|.. ..+|||++.++.+.. ..+++|..|.++|||+++| |++||+|++|||++|.++++
T Consensus 25 ~~~~r~v~l~r~~-~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~ 102 (132)
T 3l4f_D 25 IIKEKTVLLQKKD-SEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGH 102 (132)
T ss_dssp CCCCCEEEEECCT-TSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCH
T ss_pred CCCCEEEEEEECC-CCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 4566889999863 689999999886531 1268999999999999999 99999999999999999998
Q ss_pred HHHHHHhh-CCCCeEEEEEecC
Q psy6405 117 KESLAILK-RGPPVEITLIKDG 137 (548)
Q Consensus 117 ~~aV~~lk-~g~~VtVtV~RdG 137 (548)
.+++..++ .+..+.++|.|..
T Consensus 103 ~~~~~~l~~~g~~v~l~v~~~~ 124 (132)
T 3l4f_D 103 RQVVNMIRQGGNTLMVKVVMVT 124 (132)
T ss_dssp HHHHHHHHHTTTEEEEEEECCC
T ss_pred HHHHHHHHcCCCEEEEEEEECC
Confidence 88766555 5677888887744
No 89
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.15 E-value=9.9e-11 Score=103.02 Aligned_cols=84 Identities=30% Similarity=0.508 Sum_probs=69.9
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhc-CCCCCCCEEEEECCeeccCccHHHHHHHhh---
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRD-GRLQKGDRILSINGKSMKGLTHKESLAILK--- 124 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqA-GrLq~GDrILaINGv~V~~~s~~~aV~~lk--- 124 (548)
.+++.+.+.+. .+|||++.++.+...+.++|..|.++|||+++ | |++||+|++|||+++.++++.+++..++
T Consensus 17 ~~~~~~~~~~~---~glG~~i~gg~~~~~~~i~I~~V~~gspA~~agg-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~ 92 (118)
T 1v6b_A 17 KDVRLLRIKKE---GSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGG-VVKGDEIMAINGKIVTDYTLAEAEAALQKAW 92 (118)
T ss_dssp CCEEEEEEESC---SCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCS-SCTTCEEEEESSCBCTTCBHHHHHHHHHHHH
T ss_pred ceEEEEEECCC---CccCEEEEcccCCCCCCEEEEEECCCCHHHHcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHHhh
Confidence 35677777765 48999999987765567999999999999999 6 9999999999999999999887654443
Q ss_pred --CCCCeEEEEEec
Q psy6405 125 --RGPPVEITLIKD 136 (548)
Q Consensus 125 --~g~~VtVtV~Rd 136 (548)
.+..++++|.|.
T Consensus 93 ~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 93 NQGGDWIDLVVAVC 106 (118)
T ss_dssp HHTCSEEEEEEECC
T ss_pred hcCCCeEEEEEEeC
Confidence 377899999884
No 90
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.15 E-value=6.8e-11 Score=102.70 Aligned_cols=89 Identities=28% Similarity=0.564 Sum_probs=74.3
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCC
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGP 127 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~ 127 (548)
.+.+.+.+.+. ..+|||++.++.+....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++ .+.
T Consensus 16 ~~~~~v~l~~~--~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 93 (116)
T 2dm8_A 16 GQEMIIEISKG--RSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQ 93 (116)
T ss_dssp TSCEEEEEECC--SSCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCS
T ss_pred CCEEEEEEEEC--CCcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 45688888877 689999999876544468999999999999999999999999999999999998777765554 456
Q ss_pred CeEEEEEecCcc
Q psy6405 128 PVEITLIKDGAG 139 (548)
Q Consensus 128 ~VtVtV~RdGkg 139 (548)
.+.|+|.|++..
T Consensus 94 ~v~l~v~R~~~~ 105 (116)
T 2dm8_A 94 KVRLVVYRDEAH 105 (116)
T ss_dssp EEEEEEECCSSC
T ss_pred eEEEEEEeCCcc
Confidence 788989887654
No 91
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.15 E-value=2e-10 Score=101.80 Aligned_cols=95 Identities=28% Similarity=0.489 Sum_probs=77.3
Q ss_pred CCCCCCeEEEEEeeCCCCCceEEEEEeCCCC----CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHH
Q psy6405 45 IPGTSEVSVVVLHRDLPGNSVGITLAGGSDY----ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESL 120 (548)
Q Consensus 45 l~~~~d~~tV~L~Kd~~~~GLGfsIagG~d~----~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV 120 (548)
.....+.+.|.+.+. ...+|||++.++.+. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++
T Consensus 10 ~~~~~~~~~v~l~~~-~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~ 88 (129)
T 2dmz_A 10 DSSLFETYNVELVRK-DGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVV 88 (129)
T ss_dssp SSCCEEEEEEEECCC-TTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHH
T ss_pred CCCCCcEEEEEEEeC-CCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 334566788889775 378999999986543 235899999999999999999999999999999999998877765
Q ss_pred HHhh-CCCCeEEEEEecCcce
Q psy6405 121 AILK-RGPPVEITLIKDGAGL 140 (548)
Q Consensus 121 ~~lk-~g~~VtVtV~RdGkgL 140 (548)
..+. .+..+.++|.|++...
T Consensus 89 ~~l~~~~~~v~l~v~R~~~~~ 109 (129)
T 2dmz_A 89 EVLRNAGQVVHLTLVRRKTSS 109 (129)
T ss_dssp HHHHHCCSSEEEEEEEESSSS
T ss_pred HHHHcCCCeEEEEEEeCCccc
Confidence 5444 6888999999987643
No 92
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.15 E-value=1e-10 Score=102.29 Aligned_cols=89 Identities=29% Similarity=0.480 Sum_probs=73.4
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCC-----CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHH
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYE-----SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAI 122 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~-----~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~ 122 (548)
..+.++|.+.|. ++.+|||++.++.+.. ..+++|..|.++|||+ +| |++||+|++|||+++.++++.+++..
T Consensus 12 ~~~~~~v~l~k~-~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~ 88 (117)
T 2csj_A 12 IWEQYTVTLQKD-SKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQ 88 (117)
T ss_dssp EEEEEEEEEECC-SSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHH
T ss_pred cceEEEEEEEEC-CCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHH
Confidence 456788889887 3689999999886532 3579999999999997 88 99999999999999999988887655
Q ss_pred hh-CCCCeEEEEEecCcc
Q psy6405 123 LK-RGPPVEITLIKDGAG 139 (548)
Q Consensus 123 lk-~g~~VtVtV~RdGkg 139 (548)
++ .+..+.++|.|.+..
T Consensus 89 l~~~~~~v~l~v~R~~~~ 106 (117)
T 2csj_A 89 LRKSGKIAAIVVKRPRKV 106 (117)
T ss_dssp HHHSCSEEEEEEEEEEEC
T ss_pred HhcCCCeEEEEEEECCcc
Confidence 44 577899999986553
No 93
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=1.6e-10 Score=101.21 Aligned_cols=90 Identities=26% Similarity=0.423 Sum_probs=73.8
Q ss_pred CCeEEEEEeeCC-----CCCceEEEEEeCCCCC----CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHH
Q psy6405 49 SEVSVVVLHRDL-----PGNSVGITLAGGSDYE----SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKES 119 (548)
Q Consensus 49 ~d~~tV~L~Kd~-----~~~GLGfsIagG~d~~----~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~a 119 (548)
..++.+.+.|.. +..+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.++
T Consensus 11 ~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~ 90 (117)
T 1ujd_A 11 FPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEV 90 (117)
T ss_dssp SCEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHH
T ss_pred CceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHH
Confidence 345778888873 2479999999876532 2379999999999999999999999999999999999998887
Q ss_pred HHHhh-CCCCeEEEEEecCc
Q psy6405 120 LAILK-RGPPVEITLIKDGA 138 (548)
Q Consensus 120 V~~lk-~g~~VtVtV~RdGk 138 (548)
+..++ .+..+.|+|.|++.
T Consensus 91 ~~~l~~~~~~v~l~v~R~~~ 110 (117)
T 1ujd_A 91 QSIISQQSGEAEICVRLDLN 110 (117)
T ss_dssp HHHHSCCSSCEEEEEESSCC
T ss_pred HHHHhcCCCEEEEEEEECCc
Confidence 76554 46778999988765
No 94
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.14 E-value=1.7e-10 Score=99.63 Aligned_cols=87 Identities=37% Similarity=0.661 Sum_probs=72.9
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RG 126 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g 126 (548)
..+++.+.+.+. ..+|||++.++.+ .+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++ .+
T Consensus 13 ~~~~~~v~l~~~--~~~lG~~l~~~~~---~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g 87 (111)
T 2dlu_A 13 WGHVEEVELIND--GSGLGFGIVGGKT---SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCG 87 (111)
T ss_dssp CSEEEEEEEECC--SSCCCEEEECCSS---SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHC
T ss_pred cCceEEEEEEeC--CCccCEEEeccCC---CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 456788999887 5789999997653 57999999999999999999999999999999999988877665444 46
Q ss_pred CCeEEEEEecCcc
Q psy6405 127 PPVEITLIKDGAG 139 (548)
Q Consensus 127 ~~VtVtV~RdGkg 139 (548)
..+.++|.|++..
T Consensus 88 ~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 88 NSVRMLVARDPAG 100 (111)
T ss_dssp SEEEEEEEESCTT
T ss_pred CeEEEEEEeCCCC
Confidence 7789999887654
No 95
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.14 E-value=1.5e-10 Score=96.79 Aligned_cols=85 Identities=25% Similarity=0.541 Sum_probs=68.4
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhC-CC
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKR-GP 127 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~-g~ 127 (548)
..++.+.+.+. ..+|||++.++.+. .+++|..|.++|||+++| |++||+|++|||.++.++++.+++..++. +.
T Consensus 4 ~~~r~v~l~~~--~~~~G~~l~~~~~~--~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 78 (95)
T 3r68_A 4 HQPRVVVIKKG--SNGYGFYLRAGPEQ--KGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGD 78 (95)
T ss_dssp CCCEEEEEECB--TTBCSCEEEEC--C--CSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred CCcEEEEEecC--CCcccEEEEecCCC--CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 56788999987 68999999876542 489999999999999999 99999999999999999988877655553 55
Q ss_pred CeEEEEEecCc
Q psy6405 128 PVEITLIKDGA 138 (548)
Q Consensus 128 ~VtVtV~RdGk 138 (548)
.+.+.+.|.+.
T Consensus 79 ~~~~~~~r~~~ 89 (95)
T 3r68_A 79 QTTLLVLDKEL 89 (95)
T ss_dssp EEEEEEEECC-
T ss_pred eEEEEEECCcc
Confidence 66666666543
No 96
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=1.9e-10 Score=96.15 Aligned_cols=81 Identities=21% Similarity=0.328 Sum_probs=67.4
Q ss_pred CeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhC-CCC
Q psy6405 50 EVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKR-GPP 128 (548)
Q Consensus 50 d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~-g~~ 128 (548)
.+++|.+.+. ..+|||.+.+. .+++|..|.++|||+++| |++||+|++|||.++.++++.+++..+.. +..
T Consensus 3 ~~r~v~l~~~--~~g~G~~l~~~-----~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 74 (91)
T 2f5y_A 3 RYRQITIPRG--KDGFGFTICCD-----SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSE 74 (91)
T ss_dssp EEEEEEEECB--TTBTSEEEECS-----SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSE
T ss_pred ceEEEEEEeC--CCCccEEEecC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4688999887 57899999853 368999999999999999 99999999999999999988876655543 567
Q ss_pred eEEEEEecCc
Q psy6405 129 VEITLIKDGA 138 (548)
Q Consensus 129 VtVtV~RdGk 138 (548)
+.++|.|.+.
T Consensus 75 v~l~v~R~~~ 84 (91)
T 2f5y_A 75 IILLVWRMVP 84 (91)
T ss_dssp EEEEEEECC-
T ss_pred EEEEEEeCCC
Confidence 8888888654
No 97
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.14 E-value=2.8e-10 Score=96.00 Aligned_cols=85 Identities=25% Similarity=0.437 Sum_probs=66.9
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEe-------CCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHH
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAG-------GSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESL 120 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIag-------G~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV 120 (548)
...+++|.+.|.. ..+|||++.+ +.+. ..+++|..|.++|||+++| |++||+|++|||+++.++++.++.
T Consensus 2 ~~~~r~v~l~k~~-~~~~Gf~l~~~g~~~~~~~~~-~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~ 78 (96)
T 2ego_A 2 SQQRKVLTLEKGD-NQTFGFEIQTYGLHHREEQRV-EMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIV 78 (96)
T ss_dssp CCCEEEEEEECCT-TCCCSEEEEEEEC-------C-CEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHH
T ss_pred CCccEEEEEEeCC-CCCccEEEEeccccccCCCCC-CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHH
Confidence 3567899999983 6799999986 2211 3478999999999999999 999999999999999998777765
Q ss_pred HHhh-CCCCeEEEEEe
Q psy6405 121 AILK-RGPPVEITLIK 135 (548)
Q Consensus 121 ~~lk-~g~~VtVtV~R 135 (548)
..+. .+..+.++|.+
T Consensus 79 ~~l~~~~~~v~l~v~~ 94 (96)
T 2ego_A 79 DIIKASGNVLRLETLY 94 (96)
T ss_dssp HHHHHTTTEEEEEEEC
T ss_pred HHHHhCCCeEEEEEEE
Confidence 4443 24467777765
No 98
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.14 E-value=1.5e-10 Score=99.10 Aligned_cols=86 Identities=26% Similarity=0.462 Sum_probs=70.9
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcC-CCCCCCEEEEECCeeccCccHHHHHHHhhCC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDG-RLQKGDRILSINGKSMKGLTHKESLAILKRG 126 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAG-rLq~GDrILaINGv~V~~~s~~~aV~~lk~g 126 (548)
...++.+.+.+. ...+|||.+.++.+. ..+++|..|.++|||+++| +|++||+|++|||+++.++++.+++..++..
T Consensus 15 ~~~~~~v~l~~~-~~~~~G~~~~gg~~~-~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~ 92 (107)
T 3nfk_A 15 HDNLVLIRMKPD-ENGRFGFNVKGGYDQ-KMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKAS 92 (107)
T ss_dssp -CCCEEEEECCC-TTSCCCEEEEEEGGG-TEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCG
T ss_pred CCCEEEEEEEcC-CCCCCCEEEEccCCC-CCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 356788999887 368999999987653 2478999999999999999 6999999999999999999988877655532
Q ss_pred -----CCeEEEEEe
Q psy6405 127 -----PPVEITLIK 135 (548)
Q Consensus 127 -----~~VtVtV~R 135 (548)
..+.++|.|
T Consensus 93 ~~~~~~~v~l~v~r 106 (107)
T 3nfk_A 93 CERHSGELMLLVRP 106 (107)
T ss_dssp GGSBTTBEEEEEEC
T ss_pred cccCCcEEEEEEEc
Confidence 378888876
No 99
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.14 E-value=1.1e-10 Score=103.54 Aligned_cols=90 Identities=22% Similarity=0.454 Sum_probs=75.2
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCC--CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeecc-CccHHHHHHHhh
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYE--SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMK-GLTHKESLAILK 124 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~--~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~-~~s~~~aV~~lk 124 (548)
..+++.|.+.+. ...+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||+++. ++++.+++..++
T Consensus 23 ~~~~~~v~l~k~-~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~ 101 (128)
T 2db5_A 23 GRQIEYIDIERP-STGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQ 101 (128)
T ss_dssp TCEEEEEEEECC-SSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHH
T ss_pred cCceEEEEEEEC-CCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHH
Confidence 456889999987 3689999999876532 237999999999999999999999999999999997 888888776554
Q ss_pred -CCCCeEEEEEecCc
Q psy6405 125 -RGPPVEITLIKDGA 138 (548)
Q Consensus 125 -~g~~VtVtV~RdGk 138 (548)
.+..+.|+|.|.+.
T Consensus 102 ~~~~~v~l~v~r~~~ 116 (128)
T 2db5_A 102 QTTGSLRLIVAREPV 116 (128)
T ss_dssp HCCSEEEEEEEECCC
T ss_pred cCCCeEEEEEEcCCC
Confidence 56778999988754
No 100
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.13 E-value=1.2e-10 Score=99.65 Aligned_cols=85 Identities=25% Similarity=0.427 Sum_probs=70.8
Q ss_pred eEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHh-hCCCCe
Q psy6405 51 VSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAIL-KRGPPV 129 (548)
Q Consensus 51 ~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~l-k~g~~V 129 (548)
++.+.+.+. +..++||.+..+.+ ..+++|..|.++|||+++| |++||+|++|||.++.++++.+++..+ ..+..+
T Consensus 2 ~r~v~l~~~-~~~~~G~~l~~~~~--~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 77 (106)
T 3ngh_A 2 PRESKLSKQ-EGQNYGFFLRIEKD--TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSV 77 (106)
T ss_dssp CEEEEEECC-TTCCCCCEEECCTT--CCSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEE
T ss_pred CEEEEEEeC-CCCeeCEEEEEEeC--CCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEE
Confidence 577888887 47889999987643 3578999999999999999 999999999999999999877765444 467789
Q ss_pred EEEEEecCcc
Q psy6405 130 EITLIKDGAG 139 (548)
Q Consensus 130 tVtV~RdGkg 139 (548)
.++|.|.+..
T Consensus 78 ~l~v~r~~~~ 87 (106)
T 3ngh_A 78 TLLVLDGDSY 87 (106)
T ss_dssp EEEEECHHHH
T ss_pred EEEEEECCee
Confidence 9999987653
No 101
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.13 E-value=1.8e-10 Score=96.79 Aligned_cols=85 Identities=28% Similarity=0.395 Sum_probs=69.5
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCC
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGP 127 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~ 127 (548)
-.++.|.+.+. .+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++..+. .+.
T Consensus 7 ~~~~~v~l~~~---~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~ 81 (94)
T 2eeg_A 7 GMPHSVTLRGP---SPWGFRLVGGRDF-SAPLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGCHD 81 (94)
T ss_dssp CCCEEEEECCS---SCCSCCEECCTTT-TSCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTCCS
T ss_pred CceEEEEEeCC---CccCEEEECccCC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 45677888543 6899999988754 3578999999999999999 9999999999999999997777654443 567
Q ss_pred CeEEEEEecCc
Q psy6405 128 PVEITLIKDGA 138 (548)
Q Consensus 128 ~VtVtV~RdGk 138 (548)
.+.++|.|++.
T Consensus 82 ~v~l~v~R~g~ 92 (94)
T 2eeg_A 82 HLTLSVSSGPS 92 (94)
T ss_dssp CEEEEEECCSS
T ss_pred eEEEEEEeCCC
Confidence 88999988664
No 102
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.13 E-value=1.8e-10 Score=99.88 Aligned_cols=94 Identities=23% Similarity=0.387 Sum_probs=76.0
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhCCC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKRGP 127 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~g~ 127 (548)
....+++.+.+.. ..+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++..+..+.
T Consensus 13 ~~~~~~v~~~~~~-~~~lG~~l~~~~~~-~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~ 89 (114)
T 1x5n_A 13 ENKEKKVFISLVG-SRGLGCSISSGPIQ-KPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSSR 89 (114)
T ss_dssp CCSSEEEEECCCS-SCCCCEEEEECCSS-SCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHCS
T ss_pred CCCcEEEEEEEcC-CCceeEEEeecCCC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 4456788887763 78999999987543 3589999999999999999 9999999999999999998766666666567
Q ss_pred CeEEEEEec-CcceeEEE
Q psy6405 128 PVEITLIKD-GAGLGFSL 144 (548)
Q Consensus 128 ~VtVtV~Rd-GkgLGfSI 144 (548)
.+.++|.|+ +..+.+.+
T Consensus 90 ~v~l~v~r~~g~~~~~~~ 107 (114)
T 1x5n_A 90 SLTISIVAAAGRELFMTD 107 (114)
T ss_dssp SEEEEECSSTTTHHHHSS
T ss_pred eEEEEEEcCCCCceEEEe
Confidence 899999887 66544433
No 103
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.13 E-value=3.4e-10 Score=97.56 Aligned_cols=85 Identities=20% Similarity=0.374 Sum_probs=69.4
Q ss_pred CeEEEEEeeCCCCCceEEEEEeCCCCC-----------CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHH
Q psy6405 50 EVSVVVLHRDLPGNSVGITLAGGSDYE-----------SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKE 118 (548)
Q Consensus 50 d~~tV~L~Kd~~~~GLGfsIagG~d~~-----------~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~ 118 (548)
+.+.+.+.+.. ..+|||++.++.+.. ..+++|..|.++|||+++| |++||+|++|||+++.++++.+
T Consensus 7 ~~~~v~l~~~~-~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~ 84 (109)
T 1q3o_A 7 KEKTVLLQKKD-SEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQ 84 (109)
T ss_dssp EEEEEEEECCT-TSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHH
T ss_pred CcEEEEEEECC-CCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 45788888763 789999999876532 1268999999999999999 9999999999999999998877
Q ss_pred HHHHhh-CCCCeEEEEEec
Q psy6405 119 SLAILK-RGPPVEITLIKD 136 (548)
Q Consensus 119 aV~~lk-~g~~VtVtV~Rd 136 (548)
++..++ .+..+.++|.|.
T Consensus 85 ~~~~l~~~~~~v~l~v~~~ 103 (109)
T 1q3o_A 85 VVNMIRQGGNTLMVKVVMV 103 (109)
T ss_dssp HHHHHHHTTTEEEEEEEEE
T ss_pred HHHHHHhCCCEEEEEEEEC
Confidence 665554 466788888774
No 104
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.13 E-value=3.8e-10 Score=95.82 Aligned_cols=89 Identities=27% Similarity=0.570 Sum_probs=69.4
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCC--------CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHH
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYE--------SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESL 120 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~--------~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV 120 (548)
.+++++++.+. +..+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||.++.++++.++.
T Consensus 3 ldp~~v~l~~~-~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~ 81 (103)
T 2fcf_A 3 MQPRRVELWRE-PSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAV 81 (103)
T ss_dssp CSCEEEEECCC-C-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CCCEEEEEEeC-CCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 46799999987 3689999998764421 14799999999999999999999999999999999997777765
Q ss_pred HHhh-CCCCeEEEEEecCc
Q psy6405 121 AILK-RGPPVEITLIKDGA 138 (548)
Q Consensus 121 ~~lk-~g~~VtVtV~RdGk 138 (548)
..+. .+..+.++|.|.+.
T Consensus 82 ~~l~~~~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 82 EAIRKAGNPVVFMVQSIIS 100 (103)
T ss_dssp HHHHTCCSSEEEEEECCCC
T ss_pred HHHHhCCCcEEEEEEECCC
Confidence 5444 24478888888654
No 105
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.12 E-value=4.2e-10 Score=99.39 Aligned_cols=87 Identities=32% Similarity=0.508 Sum_probs=72.8
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCC
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGP 127 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~ 127 (548)
..++++.+.|. +..+|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++ .+.
T Consensus 18 ~~~~~v~l~k~-~~~~lG~~i~gg~~~-~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~ 95 (125)
T 3hpk_A 18 TVPGKVTLQKD-AQNLIGISIGGGAQY-CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKG 95 (125)
T ss_dssp EEEEEEEEECC-TTSCCCEEEEECSSC-CSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCS
T ss_pred CCCeEEEEEeC-CCCCcCEEEeccCCC-CCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 35688889887 478999999988753 357999999999999999999999999999999999988888765554 455
Q ss_pred CeEEEEEecC
Q psy6405 128 PVEITLIKDG 137 (548)
Q Consensus 128 ~VtVtV~RdG 137 (548)
.+.++|.|..
T Consensus 96 ~v~l~v~r~~ 105 (125)
T 3hpk_A 96 EVTIHYNKLQ 105 (125)
T ss_dssp EEEEEEEEEC
T ss_pred eEEEEEEECC
Confidence 6888888743
No 106
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.12 E-value=2.5e-10 Score=96.57 Aligned_cols=87 Identities=26% Similarity=0.427 Sum_probs=70.3
Q ss_pred CCCCCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh
Q psy6405 45 IPGTSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK 124 (548)
Q Consensus 45 l~~~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk 124 (548)
.....+.+++.+.+. .+.+|||++... ..+++|..|.++|||+++|+|++||+|++|||+++.++++..++..++
T Consensus 3 ~~~~~~~~~v~l~~~-~~~glG~~~~~~----~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~ 77 (96)
T 2qkv_A 3 PRNSLEKFNVDLMKK-AGKELGLSLSPN----EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFK 77 (96)
T ss_dssp CCCCCCCEEEEEECB-TTBCCCEEEEEC----SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ChHHCceEEEEEEeC-CCCCccEEEEeC----CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 344566788889776 378999998862 257999999999999999999999999999999999988777654443
Q ss_pred -CCCCeEEEEEec
Q psy6405 125 -RGPPVEITLIKD 136 (548)
Q Consensus 125 -~g~~VtVtV~Rd 136 (548)
.+..+.++|.|.
T Consensus 78 ~~~~~v~l~v~R~ 90 (96)
T 2qkv_A 78 GANGKVSMEVTRP 90 (96)
T ss_dssp TCSSEEEEEEECC
T ss_pred cCCCcEEEEEEeC
Confidence 456688888874
No 107
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.12 E-value=5.3e-10 Score=96.50 Aligned_cols=92 Identities=23% Similarity=0.392 Sum_probs=75.5
Q ss_pred eEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCC-CCCCEEEEECCeeccCccHHHHHHHh--hCCC
Q psy6405 51 VSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRL-QKGDRILSINGKSMKGLTHKESLAIL--KRGP 127 (548)
Q Consensus 51 ~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrL-q~GDrILaINGv~V~~~s~~~aV~~l--k~g~ 127 (548)
.++|.+.+. .+.+|||++.+..+ ..+++|..|.++|||+++| | ++||+|++|||.++.+++..++...+ ..+.
T Consensus 2 ~~~v~l~~~-~~~glG~~~~~~~~--~~~~~V~~v~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~ 77 (112)
T 1qau_A 2 VISVRLFKR-KVGGLGFLVKERVS--KPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRGIASE 77 (112)
T ss_dssp EEEEEEECB-TTTBTSEEEEECSS--SSCEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSS
T ss_pred EEEEEEEcC-CCCceeEEEEecCC--CCCEEEEEeCCCChHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 467888776 47899999997643 3589999999999999999 7 99999999999999997666654444 3578
Q ss_pred CeEEEEEecCcceeEEEec
Q psy6405 128 PVEITLIKDGAGLGFSLEG 146 (548)
Q Consensus 128 ~VtVtV~RdGkgLGfSItg 146 (548)
.+.+++.|++..+.+++..
T Consensus 78 ~v~l~v~R~g~~~~~~~~~ 96 (112)
T 1qau_A 78 THVVLILRGPEGFTTHLET 96 (112)
T ss_dssp SEEEEEEECCTTSEEEEEE
T ss_pred cEEEEEEeCCcccceEeee
Confidence 8999999999887777764
No 108
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.12 E-value=2.1e-10 Score=98.42 Aligned_cols=88 Identities=30% Similarity=0.568 Sum_probs=71.4
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhc-CCCCCCCEEEEECCeeccCccHHHHHHHhh-C
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRD-GRLQKGDRILSINGKSMKGLTHKESLAILK-R 125 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqA-GrLq~GDrILaINGv~V~~~s~~~aV~~lk-~ 125 (548)
...++.|.+.+. ...+|||++.++.+. ..+++|..|.++|||+++ | |++||+|++|||+++.++++.+++..++ .
T Consensus 7 ~~~~~~v~l~~~-~~~~lG~~l~~g~~~-~~~~~V~~V~~~s~A~~a~g-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 83 (103)
T 2dc2_A 7 VGPIRKVLLLKE-DHEGLGISITGGKEH-GVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQ 83 (103)
T ss_dssp --CEEEEEEECC-SSSCCCEEEEEEGGG-TEEEEEEEECTTSHHHHHTC-CCSSEEEEEETTEESTTSCHHHHHHHHHHC
T ss_pred CCCcEEEEEEeC-CCCccCEEEEeccCC-CCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 456788999887 478999999987653 247899999999999996 8 9999999999999999999888776654 3
Q ss_pred CCCeEEEEEecCc
Q psy6405 126 GPPVEITLIKDGA 138 (548)
Q Consensus 126 g~~VtVtV~RdGk 138 (548)
+..+.++|.|...
T Consensus 84 ~~~v~l~v~~~~~ 96 (103)
T 2dc2_A 84 RGEIEFEVVYVAL 96 (103)
T ss_dssp CSEEEEEEEECC-
T ss_pred CCcEEEEEEecCC
Confidence 5578888887543
No 109
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.11 E-value=2.4e-10 Score=94.53 Aligned_cols=82 Identities=24% Similarity=0.458 Sum_probs=65.3
Q ss_pred CeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh---CC
Q psy6405 50 EVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK---RG 126 (548)
Q Consensus 50 d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk---~g 126 (548)
++++|.+.|. ..+|||++.+..+ ..+++|..| ++|||+ +| |++||+|++|||+++.++++.+++..++ .+
T Consensus 3 ~~~~v~l~k~--~~g~G~~~~~~~~--~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g 75 (88)
T 3bpu_A 3 ELITVHIVKG--PMGFGFTIADSPG--GGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVESPKG 75 (88)
T ss_dssp EEEEEEEECB--TTBSSCEEEECTT--SSSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHTSCTT
T ss_pred cEEEEEEEcC--CCceeEEEEecCC--CCcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCC
Confidence 5688999997 5899999987543 357888876 999999 99 9999999999999999998777665544 47
Q ss_pred CCeEEEEEecCc
Q psy6405 127 PPVEITLIKDGA 138 (548)
Q Consensus 127 ~~VtVtV~RdGk 138 (548)
..+.++|.|++.
T Consensus 76 ~~v~l~v~R~g~ 87 (88)
T 3bpu_A 76 SEVTLLVQRQTR 87 (88)
T ss_dssp CEEEEEEEEECC
T ss_pred CEEEEEEEeCCc
Confidence 789999988753
No 110
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.11 E-value=3e-10 Score=103.12 Aligned_cols=99 Identities=28% Similarity=0.376 Sum_probs=72.5
Q ss_pred CCCeEEEEEeeCCC--CCceEEEEEeCCCC-----------CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCc
Q psy6405 48 TSEVSVVVLHRDLP--GNSVGITLAGGSDY-----------ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGL 114 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~--~~GLGfsIagG~d~-----------~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~ 114 (548)
....+.|.|.+... ..+|||++.++.+. ...+++|..|.++|||+++| |++||+|++|||+++.++
T Consensus 21 ~~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~ 99 (139)
T 2vz5_A 21 QSMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMV 99 (139)
T ss_dssp -CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTC
T ss_pred CCceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCC
Confidence 34567788877531 24899999887652 23689999999999999999 999999999999999987
Q ss_pred cHHHHHHHhh--CCCCeEEEEEecCcceeEEEecC
Q psy6405 115 THKESLAILK--RGPPVEITLIKDGAGLGFSLEGG 147 (548)
Q Consensus 115 s~~~aV~~lk--~g~~VtVtV~RdGkgLGfSItgg 147 (548)
+..+++..+. .+..+.|+|.|++....+.+...
T Consensus 100 ~~~~~~~~l~~~~g~~v~l~v~R~g~~~~v~~~~~ 134 (139)
T 2vz5_A 100 THDQARKRLTKRSEEVVRLLVTRQSLQKAVQQSML 134 (139)
T ss_dssp CHHHHHHHHCCTTCSEEEEEEEECC-------CCC
T ss_pred CHHHHHHHHHhCCCCEEEEEEEECCEEEEEEEeec
Confidence 7777665554 46779999999887766665543
No 111
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.11 E-value=5.2e-10 Score=98.83 Aligned_cols=90 Identities=21% Similarity=0.402 Sum_probs=72.0
Q ss_pred CCCCCeEEEEEeeCCCCCceEEEEEeCCCCC--CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHh
Q psy6405 46 PGTSEVSVVVLHRDLPGNSVGITLAGGSDYE--SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAIL 123 (548)
Q Consensus 46 ~~~~d~~tV~L~Kd~~~~GLGfsIagG~d~~--~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~l 123 (548)
....+.+.+.+.+. ..+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||+++.+++..+++..+
T Consensus 26 ~~~~~~~~v~l~~~--~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l 103 (121)
T 2kom_A 26 KKIGKRLNIQLKKG--TEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLL 103 (121)
T ss_dssp CCSCEEEEEEEECC--TTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHH
T ss_pred ccCCeEEEEEEEcC--CCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Confidence 33456677777776 689999999765321 25799999999999999999999999999999999998777765544
Q ss_pred h---CCCCeEEEEEecC
Q psy6405 124 K---RGPPVEITLIKDG 137 (548)
Q Consensus 124 k---~g~~VtVtV~RdG 137 (548)
+ ++..+.|+|.|++
T Consensus 104 ~~~~~g~~v~l~v~R~g 120 (121)
T 2kom_A 104 RSTKMEGTVSLLVFRQE 120 (121)
T ss_dssp HHCCSSCEEEEEEEECC
T ss_pred hcCCCCCEEEEEEEeCC
Confidence 4 3678899998865
No 112
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.11 E-value=2.5e-10 Score=98.57 Aligned_cols=91 Identities=26% Similarity=0.367 Sum_probs=77.0
Q ss_pred CCCeEEEEEecCcceeEEEecCCCCCC-CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 126 GPPVEITLIKDGAGLGFSLEGGKDSPF-GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 126 g~~VtVtV~RdGkgLGfSItgg~~s~l-G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
.....|++.|.+.++||+|.++..... +..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++++++..+
T Consensus 14 ~~~~~v~l~k~~~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 93 (108)
T 2d92_A 14 PEVKIVELVKDCKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVP 93 (108)
T ss_dssp SSCEEEEEEECSSCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSC
T ss_pred CceEEEEEEECCCccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 345789999999999999987543211 1246999999999999999999999999999999999999999999999976
Q ss_pred CCceeEEEEecc
Q psy6405 205 DGTIQDIKALGY 216 (548)
Q Consensus 205 g~~V~LlV~Ril 216 (548)
+..+.+++.|..
T Consensus 94 ~~~v~l~v~R~~ 105 (108)
T 2d92_A 94 PGLVHLGICSGP 105 (108)
T ss_dssp SEEEEEEEECCC
T ss_pred CCeEEEEEEcCC
Confidence 668888888754
No 113
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.11 E-value=1.2e-10 Score=99.72 Aligned_cols=88 Identities=20% Similarity=0.384 Sum_probs=73.1
Q ss_pred CCCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-C
Q psy6405 47 GTSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-R 125 (548)
Q Consensus 47 ~~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~ 125 (548)
....+++|.+.|. ..+|||++.++.+ ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++..+. .
T Consensus 5 ~~~~~r~v~l~k~--~~~~G~~l~~~~~--~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 79 (106)
T 2eei_A 5 SSGQPRLCYLVKE--GGSYGFSLKTVQG--KKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKS 79 (106)
T ss_dssp CCSSSEEEEEECC--SSSCSCCEECCSS--CCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHH
T ss_pred CCCCCEEEEEEEC--CCCCCEEEEeccC--CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4567899999996 7899999986543 3589999999999999999 9999999999999999988888665443 4
Q ss_pred CCCeEEEEEecCcc
Q psy6405 126 GPPVEITLIKDGAG 139 (548)
Q Consensus 126 g~~VtVtV~RdGkg 139 (548)
+..+.++|.|.+..
T Consensus 80 ~~~v~l~v~r~~~~ 93 (106)
T 2eei_A 80 GSRVMFLLVDKETD 93 (106)
T ss_dssp CSEEEEEECCTTTS
T ss_pred CCeEEEEEEcCchh
Confidence 67788888886543
No 114
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.11 E-value=9.6e-10 Score=97.09 Aligned_cols=91 Identities=30% Similarity=0.519 Sum_probs=78.6
Q ss_pred CCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC-
Q psy6405 126 GPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN- 204 (548)
Q Consensus 126 g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~- 204 (548)
+..+.|++.|...++||++.++... ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++++|+..+
T Consensus 18 ~~~~~v~l~~~~~glG~~~~~g~~~---~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 94 (123)
T 1ueq_A 18 GTFLSTTLKKSNMGFGFTIIGGDEP---DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPI 94 (123)
T ss_dssp SEEEEEEEECCTTSCSEEEECCSSS---SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCT
T ss_pred CcEEEEEEEeCCCceeEEEecccCC---CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 4457888899989999999876532 236999999999999999999999999999999999999999999999874
Q ss_pred CCceeEEEEeccccC
Q psy6405 205 DGTIQDIKALGYDLN 219 (548)
Q Consensus 205 g~~V~LlV~RilDLr 219 (548)
+..+.+++.|...+.
T Consensus 95 g~~v~l~v~R~~~~~ 109 (123)
T 1ueq_A 95 GQSVNLVLCRGYPLP 109 (123)
T ss_dssp TCEEEEEEEESCCCC
T ss_pred CCeEEEEEEeCCCCC
Confidence 778999999876544
No 115
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.10 E-value=5.2e-10 Score=95.80 Aligned_cols=94 Identities=36% Similarity=0.525 Sum_probs=77.5
Q ss_pred CCeEEEEEecCcceeEEEecCCCCC--CCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSP--FGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~--lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
..+.|++.|...++||+|.++.... .+..+++|..|.++|||+++|+|++||+|++|||.++.+.++.+++..++..
T Consensus 3 ~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~- 81 (105)
T 2awx_A 3 KIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNT- 81 (105)
T ss_dssp CEEEEEEECBTTBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSC-
T ss_pred eEEEEEEEECCCCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 4577888898899999999875432 1234799999999999999999999999999999999999999999999876
Q ss_pred CCceeEEEEeccccCCC
Q psy6405 205 DGTIQDIKALGYDLNSL 221 (548)
Q Consensus 205 g~~V~LlV~RilDLr~~ 221 (548)
+..+.+.+.|.......
T Consensus 82 ~~~v~l~v~R~~~~~~~ 98 (105)
T 2awx_A 82 SDFVYLKVAKPTSMYIS 98 (105)
T ss_dssp CSEEEEEEECCCC----
T ss_pred CCeEEEEEEcCCCCCCc
Confidence 67889999887654433
No 116
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.10 E-value=4.7e-10 Score=96.91 Aligned_cols=85 Identities=20% Similarity=0.249 Sum_probs=72.5
Q ss_pred CCCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 125 RGPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 125 ~g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
.|....|.+.|...++|++|+.+.. ..++|++|.++|+|++.|+|++||+|++|||+++.+++|.+++++|+..+
T Consensus 3 ~g~~k~V~l~K~~~~LG~tI~~~g~-----g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~ 77 (95)
T 3gge_A 3 KGIEKEVNVYKSEDSLGLTITDNGV-----GYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELK 77 (95)
T ss_dssp CEEEEEEEEECCSSCCCEEEECSSS-----SCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred CCeEEEEEEEECCCCceEEEEcCCC-----CcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCC
Confidence 3566789999999999999986422 24899999999999999999999999999999999999999999999985
Q ss_pred C-CceeEEEEe
Q psy6405 205 D-GTIQDIKAL 214 (548)
Q Consensus 205 g-~~V~LlV~R 214 (548)
. ..+++.+.+
T Consensus 78 ~g~~~~L~lv~ 88 (95)
T 3gge_A 78 KEELFTMKLIE 88 (95)
T ss_dssp TTCEEEEEEEE
T ss_pred CCCEEEEEEEC
Confidence 4 456665544
No 117
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.10 E-value=6.7e-10 Score=91.17 Aligned_cols=83 Identities=22% Similarity=0.439 Sum_probs=71.5
Q ss_pred eEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC-CCc
Q psy6405 129 VEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN-DGT 207 (548)
Q Consensus 129 VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~-g~~ 207 (548)
++|++.|...++||++.++... ..+++|..|.++|||+++|+|++||+|++|||.++.++++.++.++++..+ +..
T Consensus 2 ~~v~l~k~~~g~G~~i~~~~~~---~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~ 78 (85)
T 2i04_A 2 IHTKLRKSSRGFGFTVVGGDEP---DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGAS 78 (85)
T ss_dssp EEEEEECBTTBSSEEEEECCST---TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCE
T ss_pred EEEEEEECCCCCCEEEEcccCC---CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCe
Confidence 6788899889999999875432 236999999999999999999999999999999999999999999998864 667
Q ss_pred eeEEEEe
Q psy6405 208 IQDIKAL 214 (548)
Q Consensus 208 V~LlV~R 214 (548)
+.+.+.|
T Consensus 79 v~l~v~R 85 (85)
T 2i04_A 79 VDLELCR 85 (85)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 7777754
No 118
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.10 E-value=3.3e-10 Score=94.56 Aligned_cols=87 Identities=31% Similarity=0.593 Sum_probs=70.0
Q ss_pred CeEEEEEeeCCCCCceEEEEEeCCCC---CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-C
Q psy6405 50 EVSVVVLHRDLPGNSVGITLAGGSDY---ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-R 125 (548)
Q Consensus 50 d~~tV~L~Kd~~~~GLGfsIagG~d~---~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~ 125 (548)
+..++.+.+. ..+|||++.++.+. ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++..+. .
T Consensus 4 ~~~~v~l~~~--~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (97)
T 2iwn_A 4 ETFDVELTKN--VQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 81 (97)
T ss_dssp EEEEEEEECB--TTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTC
T ss_pred EEEEEEEecC--CCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3456777665 68899999976431 2358999999999999999999999999999999999998777665443 5
Q ss_pred CCCeEEEEEecCc
Q psy6405 126 GPPVEITLIKDGA 138 (548)
Q Consensus 126 g~~VtVtV~RdGk 138 (548)
+..+.++|.|++.
T Consensus 82 ~~~v~l~v~r~g~ 94 (97)
T 2iwn_A 82 GQTVLLTLMRRGE 94 (97)
T ss_dssp CSEEEEEEEEEEE
T ss_pred CCeEEEEEEeCCC
Confidence 7778999988653
No 119
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.10 E-value=3.1e-10 Score=100.45 Aligned_cols=91 Identities=31% Similarity=0.441 Sum_probs=76.8
Q ss_pred CCCCeEEEEEec-CcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc
Q psy6405 125 RGPPVEITLIKD-GAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL 203 (548)
Q Consensus 125 ~g~~VtVtV~Rd-GkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~ 203 (548)
+..+..|++.|. +.++||+|.++.....+..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..
T Consensus 22 ~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 101 (118)
T 3b76_A 22 SMHEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRT 101 (118)
T ss_dssp EEEEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSC
T ss_pred CCCcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 344567778776 4789999998765433445799999999999999999999999999999999999999999999987
Q ss_pred CCCceeEEEEecc
Q psy6405 204 NDGTIQDIKALGY 216 (548)
Q Consensus 204 ~g~~V~LlV~Ril 216 (548)
+..+.+++.|..
T Consensus 102 -~~~v~L~v~R~~ 113 (118)
T 3b76_A 102 -SSSIVLKALEVK 113 (118)
T ss_dssp -CSEEEEEEEEEE
T ss_pred -CCeEEEEEEECC
Confidence 667888887753
No 120
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.10 E-value=6.2e-10 Score=92.49 Aligned_cols=83 Identities=25% Similarity=0.292 Sum_probs=70.3
Q ss_pred CCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
.+..|++.|...++||++..+... .+++|..|.++|||+++| |++||+|++|||.++.++++.++.++++...+.
T Consensus 3 ~~r~v~l~r~~~g~G~~~~~~~~~----~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 77 (91)
T 1g9o_A 3 LPRLCCLEKGPNGYGFHLHGEKGK----LGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAALNA 77 (91)
T ss_dssp CCEEEEEECBTTBCCEEEEECTTC----SSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSE
T ss_pred ccEEEEEEeCCCcccEEEEecCCC----CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCc
Confidence 467899999999999999876643 369999999999999999 999999999999999999999999999987544
Q ss_pred ceeEEEEe
Q psy6405 207 TIQDIKAL 214 (548)
Q Consensus 207 ~V~LlV~R 214 (548)
.+.+++.|
T Consensus 78 ~~~~~~~r 85 (91)
T 1g9o_A 78 VRLLVVDP 85 (91)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 44444444
No 121
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.09 E-value=3.5e-10 Score=98.75 Aligned_cols=87 Identities=33% Similarity=0.604 Sum_probs=73.2
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RG 126 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g 126 (548)
..++++|.+.|. ..+|||++.++.+ ..+++|..|.++|||+++|+|++||+|++|||+++.++++..++..+. .+
T Consensus 12 ~~~~~~v~l~k~--~~glG~~l~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 87 (119)
T 1tp5_A 12 PREPRRIVIHRG--STGLGFNIVGGED--GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAG 87 (119)
T ss_dssp CCSCEEEEEECT--TSCCCEEEEECGG--GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred CCccEEEEEEEC--CCCccEEEecCCC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 457899999997 4789999998654 358999999999999999999999999999999999998777654443 57
Q ss_pred CCeEEEEEecCc
Q psy6405 127 PPVEITLIKDGA 138 (548)
Q Consensus 127 ~~VtVtV~RdGk 138 (548)
..+.++|.|.+.
T Consensus 88 ~~v~l~v~r~~~ 99 (119)
T 1tp5_A 88 QTVTIIAQYKPE 99 (119)
T ss_dssp SEEEEEEEECHH
T ss_pred CeEEEEEEECCc
Confidence 778999988653
No 122
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.09 E-value=1.2e-09 Score=92.63 Aligned_cols=89 Identities=33% Similarity=0.501 Sum_probs=76.6
Q ss_pred eEEEEEecCcceeEEEecCCCCCC--CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 129 VEITLIKDGAGLGFSLEGGKDSPF--GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 129 VtVtV~RdGkgLGfSItgg~~s~l--G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
..|++.|.+.++||++.++...+. +..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++.. +.
T Consensus 6 ~~v~l~k~~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g~ 84 (102)
T 2i1n_A 6 EEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEA-GP 84 (102)
T ss_dssp EEEEEECBTTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHS-CS
T ss_pred EEEEEEECCCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CC
Confidence 567888988999999998765432 235799999999999999999999999999999999999999999999885 78
Q ss_pred ceeEEEEecccc
Q psy6405 207 TIQDIKALGYDL 218 (548)
Q Consensus 207 ~V~LlV~RilDL 218 (548)
.+.+.+.|....
T Consensus 85 ~v~l~v~R~~~~ 96 (102)
T 2i1n_A 85 VVRLVVRRRQPP 96 (102)
T ss_dssp EEEEEEEEECCC
T ss_pred eEEEEEEeCCCC
Confidence 899999886543
No 123
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.09 E-value=5.6e-10 Score=93.64 Aligned_cols=81 Identities=28% Similarity=0.499 Sum_probs=66.2
Q ss_pred EEEEEeeCCCCCceEEEEEeCCCC-------CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh
Q psy6405 52 SVVVLHRDLPGNSVGITLAGGSDY-------ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK 124 (548)
Q Consensus 52 ~tV~L~Kd~~~~GLGfsIagG~d~-------~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk 124 (548)
.++.+.+. .+|||++.++.+. ...+++|..|.++|||++ | |++||+|++|||+++.++++.+++..+.
T Consensus 5 ~~v~l~~~---~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (95)
T 1mfg_A 5 IRVRVEKD---PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLK 79 (95)
T ss_dssp EEEEEECS---SSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred EEEEECCC---CCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhh
Confidence 45666665 4899999987641 245899999999999999 9 9999999999999999998877665443
Q ss_pred -CCCCeEEEEEecC
Q psy6405 125 -RGPPVEITLIKDG 137 (548)
Q Consensus 125 -~g~~VtVtV~RdG 137 (548)
.+..+.++|.|+.
T Consensus 80 ~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 80 TFQNTVELIIVREV 93 (95)
T ss_dssp HCCSEEEEEEEEEC
T ss_pred cCCCeEEEEEEeCC
Confidence 5778899998864
No 124
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=5.4e-10 Score=97.16 Aligned_cols=89 Identities=29% Similarity=0.545 Sum_probs=71.8
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCC------CCeEEEEEcCCChhhh-cCCCCCCCEEEEECCeeccCccHHHHH
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYES------KEITVHKVISGTPADR-DGRLQKGDRILSINGKSMKGLTHKESL 120 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~------~gVvVs~V~pGSPAaq-AGrLq~GDrILaINGv~V~~~s~~~aV 120 (548)
..++++|.+.|.. ..+|||++.++.+... .+++|..|.++|||++ +| |++||+|++|||+++.++++.+++
T Consensus 8 ~~~~~~v~l~~~~-~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~ 85 (114)
T 1uew_A 8 SLQTSDVVIHRKE-NEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIV 85 (114)
T ss_dssp CCCCEEEEEECCT-TSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHH
T ss_pred cccceEEEEEECC-CCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHH
Confidence 4567899999873 6899999998654321 1569999999999999 99 999999999999999998777765
Q ss_pred HHhh-CCCCeEEEEEecCc
Q psy6405 121 AILK-RGPPVEITLIKDGA 138 (548)
Q Consensus 121 ~~lk-~g~~VtVtV~RdGk 138 (548)
..+. .+..+.|+|.|.+.
T Consensus 86 ~~l~~~g~~v~l~v~r~~~ 104 (114)
T 1uew_A 86 KLIKDAGLSVTLRIIPQEE 104 (114)
T ss_dssp HHHHHTTTEEEEEECCCSC
T ss_pred HHHHcCCCeEEEEEEeCCc
Confidence 4443 57788898888665
No 125
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.09 E-value=1.8e-10 Score=102.69 Aligned_cols=85 Identities=22% Similarity=0.499 Sum_probs=68.9
Q ss_pred EEEEeeCCCCCceEEEEEeCCCCC---CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-----
Q psy6405 53 VVVLHRDLPGNSVGITLAGGSDYE---SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK----- 124 (548)
Q Consensus 53 tV~L~Kd~~~~GLGfsIagG~d~~---~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk----- 124 (548)
.+.+.+. ...+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++
T Consensus 28 ~v~l~k~-~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 106 (127)
T 1wg6_A 28 EIPLNDS-GSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSM 106 (127)
T ss_dssp EEECSSS-TTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHH
T ss_pred EEEEeeC-CCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhcc
Confidence 3444434 4899999999875421 247999999999999999999999999999999999999888766554
Q ss_pred ---CCCCeEEEEEecCc
Q psy6405 125 ---RGPPVEITLIKDGA 138 (548)
Q Consensus 125 ---~g~~VtVtV~RdGk 138 (548)
.+..+.|+|.|.+.
T Consensus 107 ~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 107 EGNIRGMIQLVILRRSG 123 (127)
T ss_dssp HHHHTCEEEEEEEECSC
T ss_pred ccCCCCEEEEEEEeCCC
Confidence 36789999998654
No 126
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.09 E-value=2.5e-10 Score=96.44 Aligned_cols=83 Identities=30% Similarity=0.478 Sum_probs=65.4
Q ss_pred EEEEeeCCCCCceEEEEEeCCCCCC------CCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-C
Q psy6405 53 VVVLHRDLPGNSVGITLAGGSDYES------KEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-R 125 (548)
Q Consensus 53 tV~L~Kd~~~~GLGfsIagG~d~~~------~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~ 125 (548)
++.+.+. ..+|||++.++..... .+++|..|.++|||+++| |++||+|++|||.++.++++.+++..+. +
T Consensus 5 ~v~l~~~--~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 81 (99)
T 3khf_A 5 PIVIHSS--GKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKS 81 (99)
T ss_dssp CEEEEC---CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred CEEEEeC--CCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 3556665 6899999986542211 156899999999999999 9999999999999999888887655444 6
Q ss_pred CCCeEEEEEecCc
Q psy6405 126 GPPVEITLIKDGA 138 (548)
Q Consensus 126 g~~VtVtV~RdGk 138 (548)
+..+.+++.|.+.
T Consensus 82 g~~v~l~v~r~~~ 94 (99)
T 3khf_A 82 GNKISLRTTALEN 94 (99)
T ss_dssp CSEEEEEEECSCS
T ss_pred CCEEEEEEEECCC
Confidence 7889999998665
No 127
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=4.5e-10 Score=97.95 Aligned_cols=90 Identities=24% Similarity=0.385 Sum_probs=75.0
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHh-hCCC
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAIL-KRGP 127 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~l-k~g~ 127 (548)
.+++.|.+.+. ..+|||++.++.+ .+++|..|.++|||+++| |++||+|++|||+++.++++.+++... ..+.
T Consensus 18 ~~~~~v~l~~~--~~~lG~~~~~~~~---~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~ 91 (117)
T 1uit_A 18 EEPRHVKVQKG--SEPLGISIVSGEK---GGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQCD 91 (117)
T ss_dssp CCCEEEEEECS--SCCCCEEEEECTT---SCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSCCS
T ss_pred CCCEEEEEEeC--CCCccEEEEccCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 46788999887 4899999997653 589999999999999999 999999999999999999888866433 4577
Q ss_pred CeEEEEEecCcceeEEE
Q psy6405 128 PVEITLIKDGAGLGFSL 144 (548)
Q Consensus 128 ~VtVtV~RdGkgLGfSI 144 (548)
.+.++|.|++..+.+.+
T Consensus 92 ~v~l~v~r~~~~~~~~~ 108 (117)
T 1uit_A 92 TITILAQYNPHVHQLSS 108 (117)
T ss_dssp EEEEEECCCSCCCCCCC
T ss_pred eEEEEEEECCchhhhhh
Confidence 89999999877654433
No 128
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.09 E-value=4.5e-10 Score=105.70 Aligned_cols=86 Identities=31% Similarity=0.533 Sum_probs=71.8
Q ss_pred CCeEEEEEeeCCCCCceEEEEEe---CCCC--CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHh
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAG---GSDY--ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAIL 123 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIag---G~d~--~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~l 123 (548)
.+.+.|.+.|. ..+|||++.+ +.+. ...+++|..|.++|||+++|+|++||+|++|||++|.++++.+++..+
T Consensus 79 ~~~~~v~l~k~--~~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l 156 (170)
T 3egg_C 79 LELFPVELEKD--SEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVL 156 (170)
T ss_dssp SEEEEEEEECB--TTBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHH
T ss_pred ceEEEEEEEeC--CCeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 45678888887 4799999998 3332 235799999999999999999999999999999999999999877666
Q ss_pred h-CCCCeEEEEEec
Q psy6405 124 K-RGPPVEITLIKD 136 (548)
Q Consensus 124 k-~g~~VtVtV~Rd 136 (548)
+ .+..+.|+|.|+
T Consensus 157 ~~~g~~v~L~V~R~ 170 (170)
T 3egg_C 157 RNTKGRVRFMIGRE 170 (170)
T ss_dssp HHCCSEEEEEEEEC
T ss_pred HcCCCEEEEEEEeC
Confidence 5 567788888874
No 129
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=1.1e-09 Score=97.13 Aligned_cols=98 Identities=29% Similarity=0.424 Sum_probs=81.0
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhCCC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKRGP 127 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~g~ 127 (548)
.+..+++.+.... ..+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++..++.+.
T Consensus 18 ~g~~~~v~v~~~~-~~~lG~~~~~~~~~-~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 94 (128)
T 1uf1_A 18 GGDEKKVNLVLGD-GRSLGLTIRGGAEY-GLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKSSR 94 (128)
T ss_dssp CSSEEEEEEECCS-SCCCCEEEECCTTT-TCCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCS
T ss_pred CCcEEEEEEEECC-CCccCEEEECcccC-CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 4466778777652 47899999976543 2479999999999999999 9999999999999999998877777777788
Q ss_pred CeEEEEEecCcceeEEEecCC
Q psy6405 128 PVEITLIKDGAGLGFSLEGGK 148 (548)
Q Consensus 128 ~VtVtV~RdGkgLGfSItgg~ 148 (548)
.+.|+|.|.+....++++...
T Consensus 95 ~v~l~v~R~g~~~~~~v~~~~ 115 (128)
T 1uf1_A 95 HLILTVKDVGRLPHARTTVDE 115 (128)
T ss_dssp EEEEEEECCSCCSSCSCCCCS
T ss_pred eEEEEEEECCccccccccccc
Confidence 899999999887777766543
No 130
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.09 E-value=3.9e-10 Score=96.91 Aligned_cols=82 Identities=23% Similarity=0.392 Sum_probs=65.9
Q ss_pred CeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCCC
Q psy6405 50 EVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGPP 128 (548)
Q Consensus 50 d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~~ 128 (548)
-++.+.+.|+ ++.+|||++....+ .+++|..|.++|||+++|+|++||+|++|||+++.+++..++...++ .+.+
T Consensus 12 ~~~~v~l~K~-~~~~lG~~l~~~~~---~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~ 87 (97)
T 2ejy_A 12 MVRLIQFEKV-TEEPMGICLKLNEK---QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGM 87 (97)
T ss_dssp -CEEEEEEEC-SSSCCSEEEEECTT---CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEE
T ss_pred ccEEEEEEeC-CCCCeeEEEEeCCC---CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4688999997 47899999986432 58999999999999999999999999999999999866666554443 3456
Q ss_pred eEEEEEe
Q psy6405 129 VEITLIK 135 (548)
Q Consensus 129 VtVtV~R 135 (548)
+.++|.+
T Consensus 88 v~L~V~~ 94 (97)
T 2ejy_A 88 ISLKVIP 94 (97)
T ss_dssp EEEEEEC
T ss_pred EEEEEEE
Confidence 7777664
No 131
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=9.8e-11 Score=99.33 Aligned_cols=89 Identities=27% Similarity=0.563 Sum_probs=73.0
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RG 126 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g 126 (548)
..+.+.+.+.+. ..+|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++ .+
T Consensus 9 ~~~~~~v~l~~~--~~g~G~~~~~~~~~-~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 85 (103)
T 1wfv_A 9 DFDYFTVDMEKG--AKGFGFSIRGGREY-KMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGG 85 (103)
T ss_dssp CSCCEECCEECC--TTSSSBCCEEETTT-TEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHC
T ss_pred CceEEEEEEecC--CCcCCEEEeccccC-CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 445677788776 57899999987643 247999999999999999999999999999999999998777665543 57
Q ss_pred CCeEEEEEecCcc
Q psy6405 127 PPVEITLIKDGAG 139 (548)
Q Consensus 127 ~~VtVtV~RdGkg 139 (548)
..+.++|.|++..
T Consensus 86 ~~v~l~v~R~~~~ 98 (103)
T 1wfv_A 86 RRVRLLLKRGTGS 98 (103)
T ss_dssp SEECEEEECTTCS
T ss_pred CeEEEEEEECCCC
Confidence 7889999887653
No 132
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.08 E-value=2.1e-10 Score=100.34 Aligned_cols=88 Identities=24% Similarity=0.445 Sum_probs=72.7
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhc--CCCCCCCEEEEECCeeccCccHHHHHHHhhC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRD--GRLQKGDRILSINGKSMKGLTHKESLAILKR 125 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqA--GrLq~GDrILaINGv~V~~~s~~~aV~~lk~ 125 (548)
...+++|.+.|.. .++|||++.++.+. ..+++|..|.++|||+++ | |++||+|++|||+++.++++.+++..++.
T Consensus 13 ~~~~~~v~l~k~~-~~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~a~gG-L~~GD~Il~ing~~v~~~~~~~~~~~~~~ 89 (119)
T 2cs5_A 13 HDNLVLIRMKPDE-NGRFGFNVKGGYDQ-KMPVIVSRVAPGTPADLCVPR-LNEGDQVVLINGRDIAEHTHDQVVLFIKA 89 (119)
T ss_dssp SSCCEEEEECCCS-SSCCSEEEEEEGGG-TEEEEEEEECSSSTTTSSSSC-CCTTCEEEEETTBCTTSSCHHHHHHHHHH
T ss_pred CCCeEEEEEEeCC-CCCcCEEEecccCC-CCCeEEEEECCCCHHHHhhcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4567899999973 67899999987653 347999999999999999 7 99999999999999999988887655543
Q ss_pred C-----CCeEEEEEecCc
Q psy6405 126 G-----PPVEITLIKDGA 138 (548)
Q Consensus 126 g-----~~VtVtV~RdGk 138 (548)
. ..+.++|.|...
T Consensus 90 ~~~~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 90 SCERHSGELMLLVRPNAV 107 (119)
T ss_dssp HHHCCSSCEEEEEECCCC
T ss_pred ccccCCCEEEEEEEcccc
Confidence 2 478898888643
No 133
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=1.7e-09 Score=94.81 Aligned_cols=93 Identities=26% Similarity=0.464 Sum_probs=78.8
Q ss_pred CCeEEEEEecCcceeEEEecCCCCCC--CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSPF--GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~l--G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
....|++.|...++||+|..+...+. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..
T Consensus 17 ~~~~v~l~r~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~- 95 (120)
T 2eno_A 17 TEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA- 95 (120)
T ss_dssp EEEEEEEECCSSSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHH-
T ss_pred ceEEEEEEECCCCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 34678888988999999998655321 234799999999999999999999999999999999999999999999886
Q ss_pred CCceeEEEEeccccCC
Q psy6405 205 DGTIQDIKALGYDLNS 220 (548)
Q Consensus 205 g~~V~LlV~RilDLr~ 220 (548)
+..+.+++.|......
T Consensus 96 g~~v~l~v~R~~~~~~ 111 (120)
T 2eno_A 96 GYAVSLRVQHRLQVQN 111 (120)
T ss_dssp CSEEEEEEEEEEECCC
T ss_pred CCeEEEEEEeCCcCCC
Confidence 6789999988766443
No 134
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.07 E-value=4.4e-10 Score=100.82 Aligned_cols=79 Identities=32% Similarity=0.532 Sum_probs=66.0
Q ss_pred CCCceEEEEEeCCCCC--CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh---CCCCeEEEEEe
Q psy6405 61 PGNSVGITLAGGSDYE--SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK---RGPPVEITLIK 135 (548)
Q Consensus 61 ~~~GLGfsIagG~d~~--~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk---~g~~VtVtV~R 135 (548)
...+|||++.+|.+.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++ .+..+.++|.|
T Consensus 46 ~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 125 (131)
T 1wfg_A 46 SGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSR 125 (131)
T ss_dssp SCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEE
T ss_pred CCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEc
Confidence 4789999999876543 237999999999999999999999999999999999988888765553 45779999998
Q ss_pred cCcc
Q psy6405 136 DGAG 139 (548)
Q Consensus 136 dGkg 139 (548)
.+..
T Consensus 126 ~g~~ 129 (131)
T 1wfg_A 126 SGPS 129 (131)
T ss_dssp ECSC
T ss_pred CCCC
Confidence 7653
No 135
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.07 E-value=5.1e-10 Score=105.30 Aligned_cols=90 Identities=24% Similarity=0.416 Sum_probs=76.6
Q ss_pred CCCCeEEEEEecCcceeEEEec---CCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHH
Q psy6405 125 RGPPVEITLIKDGAGLGFSLEG---GKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLK 201 (548)
Q Consensus 125 ~g~~VtVtV~RdGkgLGfSItg---g~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLr 201 (548)
....+.|++.|...++||+|.+ +.....+..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+
T Consensus 78 ~~~~~~v~l~k~~~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~ 157 (170)
T 3egg_C 78 RLELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLR 157 (170)
T ss_dssp TSEEEEEEEECBTTBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHH
T ss_pred CceEEEEEEEeCCCeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3455788889988999999988 3322223357999999999999999999999999999999999999999999999
Q ss_pred HcCCCceeEEEEec
Q psy6405 202 KLNDGTIQDIKALG 215 (548)
Q Consensus 202 s~~g~~V~LlV~Ri 215 (548)
.. +..+.++|.|.
T Consensus 158 ~~-g~~v~L~V~R~ 170 (170)
T 3egg_C 158 NT-KGRVRFMIGRE 170 (170)
T ss_dssp HC-CSEEEEEEEEC
T ss_pred cC-CCEEEEEEEeC
Confidence 95 67899998873
No 136
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.07 E-value=6.1e-10 Score=95.66 Aligned_cols=92 Identities=26% Similarity=0.458 Sum_probs=78.9
Q ss_pred hCCCCeEEEEEecCcceeEEEe-----cCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHH
Q psy6405 124 KRGPPVEITLIKDGAGLGFSLE-----GGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWS 198 (548)
Q Consensus 124 k~g~~VtVtV~RdGkgLGfSIt-----gg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~Eave 198 (548)
.++..++|++.|.+.++||++. ++........+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.
T Consensus 6 ~~~~~~~v~l~k~~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~ 85 (108)
T 1q7x_A 6 KPGDIFEVELAKNDNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVE 85 (108)
T ss_dssp CSSSEEEEEEESSSCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHH
T ss_pred CCCcEEEEEEEECCCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 3466788999999999999998 65544333457999999999999999999999999999999999888889999
Q ss_pred HHHHcCCCceeEEEEecc
Q psy6405 199 LLKKLNDGTIQDIKALGY 216 (548)
Q Consensus 199 lLrs~~g~~V~LlV~Ril 216 (548)
+++.. +..+.+++.|..
T Consensus 86 ~~~~~-g~~v~l~v~R~~ 102 (108)
T 1q7x_A 86 TLRNT-GQVVHLLLEKGQ 102 (108)
T ss_dssp HHHHT-TSEEEEEEECCC
T ss_pred HHHcC-CCeEEEEEEeCC
Confidence 99886 778899998864
No 137
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.07 E-value=1e-09 Score=96.54 Aligned_cols=92 Identities=36% Similarity=0.537 Sum_probs=77.8
Q ss_pred CCCCeEEEEEecCcceeEEEecCCCCC--CCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHH
Q psy6405 125 RGPPVEITLIKDGAGLGFSLEGGKDSP--FGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKK 202 (548)
Q Consensus 125 ~g~~VtVtV~RdGkgLGfSItgg~~s~--lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs 202 (548)
+.....|++.|...++||+|.++...+ .+..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++++++.
T Consensus 22 ~~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 101 (117)
T 2byg_A 22 SMTVVEIKLFKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKN 101 (117)
T ss_dssp EEEEEEEEEECBTTBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CCceEEEEEEeCCCCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 344577888888899999999876432 123579999999999999999999999999999999999999999999997
Q ss_pred cCCCceeEEEEeccc
Q psy6405 203 LNDGTIQDIKALGYD 217 (548)
Q Consensus 203 ~~g~~V~LlV~RilD 217 (548)
. +..+.+++.|...
T Consensus 102 ~-g~~v~l~v~R~~~ 115 (117)
T 2byg_A 102 T-SEVVYLKVGKPTT 115 (117)
T ss_dssp C-CSEEEEEEEEEEE
T ss_pred C-CCeEEEEEEeCCc
Confidence 6 6788999988643
No 138
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.07 E-value=4.7e-10 Score=100.01 Aligned_cols=87 Identities=24% Similarity=0.497 Sum_probs=72.4
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhC--
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKR-- 125 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~-- 125 (548)
.++..++.+.+. ..+|||++.++.+ ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++.
T Consensus 16 ~g~~~~v~l~~~--~~g~G~~i~g~~~-~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~ 92 (129)
T 2kpk_A 16 KGKFIHTKLRKS--SRGFGFTVVGGDE-PDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIP 92 (129)
T ss_dssp CSEEEEEEEEEC--SSCCSEEEEEEEE-TTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSC
T ss_pred CCcEEEEEEEEC--CCcccEEEeCccC-CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 466788899987 5799999998654 23469999999999999999999999999999999999888776655542
Q ss_pred -CCCeEEEEEecC
Q psy6405 126 -GPPVEITLIKDG 137 (548)
Q Consensus 126 -g~~VtVtV~RdG 137 (548)
+..+.++|.|+.
T Consensus 93 ~g~~v~l~v~R~~ 105 (129)
T 2kpk_A 93 IGASVDLELCRGY 105 (129)
T ss_dssp TTEEEEEEEEECS
T ss_pred CCCeEEEEEEeCC
Confidence 667899998865
No 139
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.07 E-value=1.4e-10 Score=100.37 Aligned_cols=88 Identities=31% Similarity=0.555 Sum_probs=71.9
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCC--------CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHH
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDY--------ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESL 120 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~--------~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV 120 (548)
..+++|.+.|. ++.+|||++.++.+. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++
T Consensus 8 ~~~~~v~l~k~-~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 86 (111)
T 1uju_A 8 PGLRELCIQKA-PGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAV 86 (111)
T ss_dssp CSSSCEEEECC-TTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHH
T ss_pred CccEEEEEEEC-CCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 44677888887 478999999987642 235799999999999999999999999999999999998888877
Q ss_pred HHhh-CCCCeEEEEEecC
Q psy6405 121 AILK-RGPPVEITLIKDG 137 (548)
Q Consensus 121 ~~lk-~g~~VtVtV~RdG 137 (548)
..++ .+..+.++|.|..
T Consensus 87 ~~l~~~g~~v~l~v~r~~ 104 (111)
T 1uju_A 87 QLLRSVGDTLTVLVCDGF 104 (111)
T ss_dssp HHHSSCSSEEEECCCCCC
T ss_pred HHHHcCCCeEEEEEEECC
Confidence 6655 4566777777643
No 140
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.07 E-value=4.2e-10 Score=97.58 Aligned_cols=83 Identities=27% Similarity=0.450 Sum_probs=68.3
Q ss_pred CeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCCC
Q psy6405 50 EVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGPP 128 (548)
Q Consensus 50 d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~~ 128 (548)
+..+|.|.++ ...++||++.+. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++ .+..
T Consensus 2 ~~~~v~L~k~-~~~glG~~i~~~----~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~ 76 (106)
T 2la8_A 2 EKFNVDLMKK-AGKELGLSLSPN----EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGK 76 (106)
T ss_dssp EEEEEEECCB-SSSTTCCEEEEC----SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSC
T ss_pred eEEEEEEEeC-CCCccCEEEEeC----CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCe
Confidence 3567888866 378999999862 257999999999999999999999999999999999988877655443 4567
Q ss_pred eEEEEEecC
Q psy6405 129 VEITLIKDG 137 (548)
Q Consensus 129 VtVtV~RdG 137 (548)
+.++|.|..
T Consensus 77 v~l~v~R~~ 85 (106)
T 2la8_A 77 VSMEVTRPK 85 (106)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEeCC
Confidence 888888853
No 141
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.07 E-value=1e-09 Score=92.20 Aligned_cols=90 Identities=27% Similarity=0.502 Sum_probs=75.9
Q ss_pred CeEEEEEecCcceeEEEecCCCCC-CCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 128 PVEITLIKDGAGLGFSLEGGKDSP-FGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 128 ~VtVtV~RdGkgLGfSItgg~~s~-lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
.+.|++.|++.++||++.++.... ....+++|..|.++|||+++|+|++||+|++|||.++.++++.++.++++. .+.
T Consensus 4 ~~~v~l~k~~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~ 82 (97)
T 2jil_A 4 TVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ-CGQ 82 (97)
T ss_dssp EEEEEEECBTTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH-SCS
T ss_pred EEEEEEEeCCCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCC
Confidence 467888888889999998765321 112369999999999999999999999999999999999999999999998 688
Q ss_pred ceeEEEEecccc
Q psy6405 207 TIQDIKALGYDL 218 (548)
Q Consensus 207 ~V~LlV~RilDL 218 (548)
.+.+.+.|..+.
T Consensus 83 ~v~l~v~R~~~~ 94 (97)
T 2jil_A 83 EAALLIEYDVSE 94 (97)
T ss_dssp EEEEEEEEECCC
T ss_pred eEEEEEEeCCCc
Confidence 899999987543
No 142
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.06 E-value=3.5e-10 Score=100.06 Aligned_cols=93 Identities=30% Similarity=0.473 Sum_probs=73.5
Q ss_pred CCCCeEEEEEecC-cceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc
Q psy6405 125 RGPPVEITLIKDG-AGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL 203 (548)
Q Consensus 125 ~g~~VtVtV~RdG-kgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~ 203 (548)
+.....|++.|.. .++||+|.++.....+..+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++..
T Consensus 22 ~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~ 101 (120)
T 2iwo_A 22 SMGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNA 101 (120)
T ss_dssp ---CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHC
T ss_pred CCCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3456788888866 489999988654322234699999999999999944999999999999999999999999999997
Q ss_pred CCCceeEEEEecccc
Q psy6405 204 NDGTIQDIKALGYDL 218 (548)
Q Consensus 204 ~g~~V~LlV~RilDL 218 (548)
+..+.+++.|..+.
T Consensus 102 -~~~v~l~v~r~g~~ 115 (120)
T 2iwo_A 102 -SGSIEMQVVAGGDV 115 (120)
T ss_dssp -CSEEEEEEECCTTS
T ss_pred -CCeEEEEEEECCcc
Confidence 55689999887654
No 143
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.06 E-value=2.7e-10 Score=96.11 Aligned_cols=85 Identities=18% Similarity=0.351 Sum_probs=67.7
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh--CC
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK--RG 126 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk--~g 126 (548)
..++.+.+.+. ..+|||++.++.+ ..+++|..|.++|||+++| |++||+|++|||+++.+++..++...+. .+
T Consensus 8 ~~~~~~~l~~~--~~g~G~~~~~~~~--~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 82 (98)
T 2jxo_A 8 LRPRLCTMKKG--PSGYGFNLHSDKS--KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGD 82 (98)
T ss_dssp SCCEEEEEECT--TTCCCEEEECCCS--SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred CCcEEEEEEeC--CCcccEEEEecCC--CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 34678888887 5899999987653 3589999999999999999 9999999999999999976666554443 34
Q ss_pred CCeEEEEEecCc
Q psy6405 127 PPVEITLIKDGA 138 (548)
Q Consensus 127 ~~VtVtV~RdGk 138 (548)
..+.++|.|++.
T Consensus 83 ~~~~l~v~R~g~ 94 (98)
T 2jxo_A 83 ETKLLVVDRETD 94 (98)
T ss_dssp EEEEEECCHHHH
T ss_pred cEEEEEEECCch
Confidence 456677777654
No 144
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.06 E-value=9.6e-10 Score=91.32 Aligned_cols=83 Identities=22% Similarity=0.305 Sum_probs=73.7
Q ss_pred CCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
.+..|++.|...++||++...... .+++|..|.++|||+++| |++||+|++|||.++.++++.++.++++.. +.
T Consensus 4 ~~r~v~l~k~~~g~G~~~~~~~~~----~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~ 77 (90)
T 2he4_A 4 RPRLCHLRKGPQGYGFNLHSDKSR----PGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKAR-ED 77 (90)
T ss_dssp CCEEEEEECBTTBCCEEEEECSSS----SSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTS-SS
T ss_pred CcEEEEEEECCCCccEEEEccCCC----CCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-CC
Confidence 467889999989999999876542 369999999999999999 999999999999999999999999999886 77
Q ss_pred ceeEEEEec
Q psy6405 207 TIQDIKALG 215 (548)
Q Consensus 207 ~V~LlV~Ri 215 (548)
.+.+.+.|.
T Consensus 78 ~v~l~v~r~ 86 (90)
T 2he4_A 78 EARLLVVGP 86 (90)
T ss_dssp EEEEEEECC
T ss_pred cEEEEEEcc
Confidence 888888875
No 145
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.06 E-value=1.5e-09 Score=91.94 Aligned_cols=89 Identities=27% Similarity=0.469 Sum_probs=76.3
Q ss_pred CCeEEEEEecCcceeEEEecCCCCCC--CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSPF--GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~l--G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
....|++.|...++||++.++..... ...+++|..|.++|||+++|+|+.||+|++|||.++.++++.++..+++..
T Consensus 7 ~~~~v~l~~~~~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~- 85 (101)
T 2jik_A 7 TEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA- 85 (101)
T ss_dssp EEEEEEEECCTTCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTC-
T ss_pred ccEEEEEEeCCCCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-
Confidence 45778899988999999998765432 234799999999999999999999999999999999999999999999876
Q ss_pred CCceeEEEEecc
Q psy6405 205 DGTIQDIKALGY 216 (548)
Q Consensus 205 g~~V~LlV~Ril 216 (548)
+..+.+++.|..
T Consensus 86 g~~v~l~v~R~~ 97 (101)
T 2jik_A 86 GYAVSLRVQHRL 97 (101)
T ss_dssp CSEEEEEEEEES
T ss_pred CCeEEEEEEeCC
Confidence 677888888754
No 146
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.06 E-value=3e-10 Score=100.02 Aligned_cols=91 Identities=36% Similarity=0.600 Sum_probs=76.5
Q ss_pred CCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 126 GPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 126 g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
.....|++.|...++||++.++...+.+..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++++++.. +
T Consensus 24 ~~~~~v~L~k~~~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~ 102 (117)
T 2fne_A 24 PQCKSITLERGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRT-K 102 (117)
T ss_dssp CEEEEEEECCBTTBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC-C
T ss_pred CccEEEEEEeCCCcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-C
Confidence 345778899988999999987643322234699999999999999999999999999999999999999999999987 4
Q ss_pred CceeEEEEeccc
Q psy6405 206 GTIQDIKALGYD 217 (548)
Q Consensus 206 ~~V~LlV~RilD 217 (548)
..+.+++.|...
T Consensus 103 ~~v~l~v~R~g~ 114 (117)
T 2fne_A 103 GTVTLMVLSSDE 114 (117)
T ss_dssp SSEEEEEEECSC
T ss_pred CeEEEEEEeCCc
Confidence 568998888643
No 147
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.06 E-value=9.4e-10 Score=94.79 Aligned_cols=92 Identities=23% Similarity=0.376 Sum_probs=79.4
Q ss_pred CCCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 125 RGPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 125 ~g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
.+..+.|++.|...++||++..+.....+..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..
T Consensus 6 ~~~~~~v~l~~~~~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~- 84 (110)
T 1um1_A 6 SGYVFTVELERGPSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHG- 84 (110)
T ss_dssp CCCEEEEEEECCTTCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTC-
T ss_pred CCcEEEEEEEECCCccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 3556888899988999999988765443445799999999999999999999999999999999999999999999886
Q ss_pred CCceeEEEEeccc
Q psy6405 205 DGTIQDIKALGYD 217 (548)
Q Consensus 205 g~~V~LlV~RilD 217 (548)
+..+.+.+.|...
T Consensus 85 ~~~v~l~v~R~~~ 97 (110)
T 1um1_A 85 GKKMRFLVAKSDV 97 (110)
T ss_dssp CSEEEEEEECCCH
T ss_pred CCeEEEEEEeCCc
Confidence 7788999988643
No 148
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.06 E-value=8.1e-10 Score=98.49 Aligned_cols=91 Identities=24% Similarity=0.470 Sum_probs=78.3
Q ss_pred CCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC-
Q psy6405 126 GPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN- 204 (548)
Q Consensus 126 g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~- 204 (548)
+..+.|++.|.+.++||++.++... ..+++|..|.++|+|+++|+|+.||+|++|||+++.++++.+++++|+..+
T Consensus 17 g~~~~v~l~~~~~g~G~~i~g~~~~---~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~ 93 (129)
T 2kpk_A 17 GKFIHTKLRKSSRGFGFTVVGGDEP---DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPI 93 (129)
T ss_dssp SEEEEEEEEECSSCCSEEEEEEEET---TEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCT
T ss_pred CcEEEEEEEECCCcccEEEeCccCC---CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 5567889999889999999875422 135899999999999999999999999999999999999999999999876
Q ss_pred CCceeEEEEeccccC
Q psy6405 205 DGTIQDIKALGYDLN 219 (548)
Q Consensus 205 g~~V~LlV~RilDLr 219 (548)
+..+.+.+.|...+.
T Consensus 94 g~~v~l~v~R~~~~~ 108 (129)
T 2kpk_A 94 GASVDLELCRGYPLP 108 (129)
T ss_dssp TEEEEEEEEECSCCS
T ss_pred CCeEEEEEEeCCCCC
Confidence 678999999876543
No 149
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.06 E-value=6.1e-10 Score=92.33 Aligned_cols=85 Identities=25% Similarity=0.509 Sum_probs=73.1
Q ss_pred CeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC-CC
Q psy6405 128 PVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN-DG 206 (548)
Q Consensus 128 ~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~-g~ 206 (548)
+.+|++.|...++||++.++.... .+++|..|.++|||+++|+|++||+|++|||.++.+.++.++..+++..+ +.
T Consensus 3 ~~~v~l~~~~~g~G~~~~~g~~~~---~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 79 (90)
T 2q9v_A 3 EQDIFLWRKETGFGFRILGGNEPG---EPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQG 79 (90)
T ss_dssp EEEEEEECBTTBCCEEEEECSSTT---SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHT
T ss_pred cEEEEEEECCCccCEEEEccccCC---CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 467889999999999998765432 36999999999999999999999999999999999999999999998874 34
Q ss_pred ceeEEEEec
Q psy6405 207 TIQDIKALG 215 (548)
Q Consensus 207 ~V~LlV~Ri 215 (548)
.+.+.+.|.
T Consensus 80 ~v~l~v~R~ 88 (90)
T 2q9v_A 80 HVNLTVRQT 88 (90)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEec
Confidence 788888763
No 150
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.06 E-value=5.9e-10 Score=98.34 Aligned_cols=91 Identities=32% Similarity=0.404 Sum_probs=72.7
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCC---CCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSD---YESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK- 124 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d---~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk- 124 (548)
.+.++|.+.+. +..+|||++.++.. ....+++|..|.++|||+++|+|++||+|++|||+++.+++..+++..++
T Consensus 14 ~~~~~v~l~k~-~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 92 (122)
T 1v5q_A 14 TETTEVVLTAD-PVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRD 92 (122)
T ss_dssp EEEEEEEECCC-SSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHH
T ss_pred ceeEEEEEEeC-CCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 46788888887 47899999997631 12357899999999999999999999999999999999866666543332
Q ss_pred --CCCCeEEEEEecCcce
Q psy6405 125 --RGPPVEITLIKDGAGL 140 (548)
Q Consensus 125 --~g~~VtVtV~RdGkgL 140 (548)
++..+.|+|.|++...
T Consensus 93 ~~~g~~v~l~v~R~~~~~ 110 (122)
T 1v5q_A 93 SSITSKVTLEIEFDVAES 110 (122)
T ss_dssp HTTTTCEEEEEEEECCCS
T ss_pred CCCCCeEEEEEEECCccc
Confidence 3778999999977643
No 151
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.05 E-value=1.3e-09 Score=91.70 Aligned_cols=89 Identities=27% Similarity=0.459 Sum_probs=76.5
Q ss_pred CCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 126 GPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 126 g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
|.++.|++.|...++||++..+..... .+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++.. +
T Consensus 3 g~~~~v~l~~~~~~lG~~l~~~~~~~~--~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~ 79 (98)
T 2opg_A 3 GCETTIEISKGRTGLGLSIVGGSDTLL--GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQT-P 79 (98)
T ss_dssp CEEEEEEEECBTTBTCEEEEECTTSTT--CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC-C
T ss_pred CCEEEEEEEECCCcccEEEecCCCCCC--CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-C
Confidence 567889999999999999987764321 3699999999999999999999999999999999999999999999876 4
Q ss_pred CceeEEEEeccc
Q psy6405 206 GTIQDIKALGYD 217 (548)
Q Consensus 206 ~~V~LlV~RilD 217 (548)
..+.+.+.|...
T Consensus 80 ~~v~l~v~R~~~ 91 (98)
T 2opg_A 80 QRVRLTLYRDEA 91 (98)
T ss_dssp SEEEEEEEECSS
T ss_pred CeEEEEEEcCCC
Confidence 788888887543
No 152
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.05 E-value=4.9e-10 Score=106.16 Aligned_cols=88 Identities=30% Similarity=0.499 Sum_probs=76.4
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhCCC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKRGP 127 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~g~ 127 (548)
...++.|.+.+.. ..+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||.+|.++++.+++..++.+.
T Consensus 82 ~~~~~~v~l~k~~-~~~lG~~i~~~~~~-~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~ 158 (192)
T 3k1r_A 82 SRKLKEVRLDRLH-PEGLGLSVRGGLEF-GCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRTEK 158 (192)
T ss_dssp CSSCEEEEEETTS-TTCCCEEEEEEGGG-TEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTSSS
T ss_pred CCceEEEEEEeCC-CCceeEEEEccccc-CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcCCC
Confidence 3567899999884 67999999987543 3589999999999999999 9999999999999999988888887777788
Q ss_pred CeEEEEEecCc
Q psy6405 128 PVEITLIKDGA 138 (548)
Q Consensus 128 ~VtVtV~RdGk 138 (548)
.+.++|.|.+.
T Consensus 159 ~v~l~v~r~g~ 169 (192)
T 3k1r_A 159 TVSIKVRHIGL 169 (192)
T ss_dssp EEEEEEEECCE
T ss_pred eEEEEEEECCc
Confidence 89999999765
No 153
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.05 E-value=2.1e-10 Score=93.89 Aligned_cols=79 Identities=27% Similarity=0.457 Sum_probs=66.5
Q ss_pred CeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCCC
Q psy6405 50 EVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGPP 128 (548)
Q Consensus 50 d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~~ 128 (548)
.+++|.+.|. ..+|||++.++ .+++|..|.++|||+++| |++||+|++|||+++.++++.+++..+. .+..
T Consensus 2 ~~r~v~l~~~--~~g~G~~~~~~-----~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 73 (83)
T 2kv8_A 2 RVRSVEVARG--RAGYGFTLSGQ-----APCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKCSGV 73 (83)
T ss_dssp CEEEEEECCC--SSCCSCBCCCS-----SSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCSSC
T ss_pred CcEEEEEEeC--CCcccEEEEcC-----CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 4688999988 48899988753 368999999999999999 9999999999999999998777765554 3466
Q ss_pred eEEEEEec
Q psy6405 129 VEITLIKD 136 (548)
Q Consensus 129 VtVtV~Rd 136 (548)
+.++|.|+
T Consensus 74 v~l~v~R~ 81 (83)
T 2kv8_A 74 LHMVIAEG 81 (83)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 88888875
No 154
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.05 E-value=8.3e-10 Score=96.13 Aligned_cols=85 Identities=22% Similarity=0.468 Sum_probs=70.2
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCC-CCCCEEEEECCeeccCccHHHHHHHhh-C
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRL-QKGDRILSINGKSMKGLTHKESLAILK-R 125 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrL-q~GDrILaINGv~V~~~s~~~aV~~lk-~ 125 (548)
..++++|.+.|. ...+|||++... ..+++|..|.++|||+++| | ++||+|++|||++|.++++.+++..++ .
T Consensus 23 ~~~~~~v~l~k~-~~~~lG~~i~~~----~~gv~V~~V~~~spA~~aG-ll~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 96 (113)
T 1va8_A 23 GETVKIVRIEKA-RDIPLGATVRNE----MDSVIISRIVKGGAAEKSG-LLHEGDEVLEINGIEIRGKDVNEVFDLLSDM 96 (113)
T ss_dssp TEECEEEEEEEC-TTCCCCEEEEEC----SSSEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred CCceEEEEEEeC-CCCceeEEEEeC----CCCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 346788999998 355999999865 3589999999999999999 7 999999999999999988877765553 3
Q ss_pred CCCeEEEEEecCc
Q psy6405 126 GPPVEITLIKDGA 138 (548)
Q Consensus 126 g~~VtVtV~RdGk 138 (548)
+..+.++|.|.+.
T Consensus 97 ~~~v~l~v~r~~~ 109 (113)
T 1va8_A 97 HGTLTFVLIPSSG 109 (113)
T ss_dssp CEEEEEEEECCCC
T ss_pred CCeEEEEEEECCc
Confidence 4568888887664
No 155
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.04 E-value=1.7e-09 Score=90.14 Aligned_cols=88 Identities=34% Similarity=0.555 Sum_probs=74.2
Q ss_pred CCeEEEEEecCcceeEEEecCCCCC--CCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSP--FGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~--lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
....|++.|...++||++.++...+ .+..+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++..
T Consensus 3 ~~~~v~l~k~~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~- 81 (94)
T 2fe5_A 3 TIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNT- 81 (94)
T ss_dssp CEEEEEEECCTTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTC-
T ss_pred EEEEEEEEECCCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 3467888998899999999865432 1234799999999999999999999999999999999999999999999876
Q ss_pred CCceeEEEEec
Q psy6405 205 DGTIQDIKALG 215 (548)
Q Consensus 205 g~~V~LlV~Ri 215 (548)
+..+.+.+.|.
T Consensus 82 ~~~v~l~v~R~ 92 (94)
T 2fe5_A 82 SDMVYLKVAKP 92 (94)
T ss_dssp CSEEEEEEECC
T ss_pred CCeEEEEEEcC
Confidence 45788888764
No 156
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.04 E-value=7.3e-10 Score=98.25 Aligned_cols=93 Identities=28% Similarity=0.428 Sum_probs=78.0
Q ss_pred hCCCCeEEEEEecC-cceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcC-CCCHHHHHHHHH
Q psy6405 124 KRGPPVEITLIKDG-AGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVT-EMSRIEAWSLLK 201 (548)
Q Consensus 124 k~g~~VtVtV~RdG-kgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~-~~t~~EavelLr 201 (548)
..+....|++.|.. .++||+|.++.....+..+++|..|.++|||+++|+|++||+|++|||+++. ++++.+++.+++
T Consensus 22 ~~~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~ 101 (128)
T 2db5_A 22 QGRQIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQ 101 (128)
T ss_dssp TTCEEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHH
T ss_pred ccCceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHH
Confidence 34566778888875 6899999876544333347999999999999999999999999999999997 999999999999
Q ss_pred HcCCCceeEEEEeccc
Q psy6405 202 KLNDGTIQDIKALGYD 217 (548)
Q Consensus 202 s~~g~~V~LlV~RilD 217 (548)
.. +..+.+++.|...
T Consensus 102 ~~-~~~v~l~v~r~~~ 116 (128)
T 2db5_A 102 QT-TGSLRLIVAREPV 116 (128)
T ss_dssp HC-CSEEEEEEEECCC
T ss_pred cC-CCeEEEEEEcCCC
Confidence 85 6789999988743
No 157
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.04 E-value=1.8e-09 Score=90.34 Aligned_cols=84 Identities=25% Similarity=0.434 Sum_probs=72.3
Q ss_pred CCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
....+++.|.+.++||++...... .+++|..|.++|||+++|+|++||+|++|||.++.++++.++++++++..+
T Consensus 4 ~~r~v~l~k~~~~lG~~i~~~~~~----~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~- 78 (93)
T 3o46_A 4 SVKIIRLVKNREPLGATIKKDEQT----GAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQG- 78 (93)
T ss_dssp CCEEEEEEESSSCCCEEEEECTTT----CCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCE-
T ss_pred cEEEEEEEeCCCCccEEEEecCCC----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC-
Confidence 346788889999999999876221 369999999999999999999999999999999999999999999998754
Q ss_pred ceeEEEEec
Q psy6405 207 TIQDIKALG 215 (548)
Q Consensus 207 ~V~LlV~Ri 215 (548)
.+.+.+.+.
T Consensus 79 ~v~l~v~~~ 87 (93)
T 3o46_A 79 AITFKIIPG 87 (93)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEEeC
Confidence 778777664
No 158
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.04 E-value=1.1e-09 Score=94.79 Aligned_cols=91 Identities=23% Similarity=0.390 Sum_probs=76.5
Q ss_pred CeEEEEEecCcceeEEEec---CCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 128 PVEITLIKDGAGLGFSLEG---GKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 128 ~VtVtV~RdGkgLGfSItg---g~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
.+.|++.|...++||++.+ +........+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..
T Consensus 5 ~~~v~l~k~~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~- 83 (113)
T 2g5m_B 5 LFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNT- 83 (113)
T ss_dssp EEEEECCCCSSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHS-
T ss_pred EEEEEEEeCCCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-
Confidence 3567777888999999987 433222334799999999999999999999999999999999999999999999987
Q ss_pred CCceeEEEEeccccC
Q psy6405 205 DGTIQDIKALGYDLN 219 (548)
Q Consensus 205 g~~V~LlV~RilDLr 219 (548)
+..+.+.+.|.....
T Consensus 84 g~~v~l~v~R~~~~~ 98 (113)
T 2g5m_B 84 KGRVRFMIGRERPGE 98 (113)
T ss_dssp CSSCEEEEEECCCCT
T ss_pred CCeEEEEEEeCCCCC
Confidence 788999999876543
No 159
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=1.4e-09 Score=93.33 Aligned_cols=89 Identities=24% Similarity=0.450 Sum_probs=75.5
Q ss_pred CeEEEEEecCcceeEEEec---CCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 128 PVEITLIKDGAGLGFSLEG---GKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 128 ~VtVtV~RdGkgLGfSItg---g~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
.+.|++.|...++||+|.+ +........+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..
T Consensus 10 ~~~v~l~k~~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~- 88 (107)
T 1wf8_A 10 LFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNT- 88 (107)
T ss_dssp EEEEEEECBTTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHC-
T ss_pred EEEEEEEECCCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-
Confidence 3667788888999999988 333322334799999999999999999999999999999999999999999999886
Q ss_pred CCceeEEEEeccc
Q psy6405 205 DGTIQDIKALGYD 217 (548)
Q Consensus 205 g~~V~LlV~RilD 217 (548)
+..+.+++.|...
T Consensus 89 ~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 89 KGNVRFVIGREKP 101 (107)
T ss_dssp CSEEEEEEEEECC
T ss_pred CCeEEEEEEeCCC
Confidence 7789999988643
No 160
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.04 E-value=7.3e-10 Score=94.24 Aligned_cols=83 Identities=31% Similarity=0.481 Sum_probs=64.7
Q ss_pred EEEEeeCC--CCCceEEEEEeCCCC-----------CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHH
Q psy6405 53 VVVLHRDL--PGNSVGITLAGGSDY-----------ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKES 119 (548)
Q Consensus 53 tV~L~Kd~--~~~GLGfsIagG~d~-----------~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~a 119 (548)
.+.+.+.. ...+|||++.++.+. ...+++|..|.++|||+++| |++||+|++|||+++.++++.++
T Consensus 7 ~i~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~ 85 (104)
T 3sfj_A 7 RVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQA 85 (104)
T ss_dssp EEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred EEEEEEccCCCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 44444432 234799999977653 24679999999999999999 99999999999999999887776
Q ss_pred HHHhh--CCCCeEEEEEec
Q psy6405 120 LAILK--RGPPVEITLIKD 136 (548)
Q Consensus 120 V~~lk--~g~~VtVtV~Rd 136 (548)
+..+. .+..+.++|.|.
T Consensus 86 ~~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 86 RKRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp HHHHTCTTCSEEEEEEEEC
T ss_pred HHHHHhCCCCEEEEEEEcC
Confidence 65554 456788888773
No 161
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.04 E-value=9.5e-10 Score=92.20 Aligned_cols=76 Identities=24% Similarity=0.349 Sum_probs=66.1
Q ss_pred CCeEEEEEecCc-ceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 127 PPVEITLIKDGA-GLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 127 ~~VtVtV~RdGk-gLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
.+..|++.|+.. ++||++..+ .|.+|.++|||+++| |++||+|++|||+++.+++|++++++|+. .+
T Consensus 4 ~~r~v~l~k~~~g~~Gf~i~~g----------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~-~g 71 (82)
T 1r6j_A 4 DPRTITMHKDSTGHVGFIFKNG----------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILST-SG 71 (82)
T ss_dssp CCEEEEEECCTTSCCCEEEETT----------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHH-SC
T ss_pred ceEEEEEEECCCCCeEEEEECC----------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhc-CC
Confidence 567899998764 599999754 378999999999999 99999999999999999999999999995 47
Q ss_pred CceeEEEEe
Q psy6405 206 GTIQDIKAL 214 (548)
Q Consensus 206 ~~V~LlV~R 214 (548)
.++++++..
T Consensus 72 ~~V~L~v~p 80 (82)
T 1r6j_A 72 TVVTITIMP 80 (82)
T ss_dssp SEEEEEEEE
T ss_pred CEEEEEEEe
Confidence 788887753
No 162
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.04 E-value=5.8e-10 Score=98.59 Aligned_cols=95 Identities=22% Similarity=0.400 Sum_probs=78.2
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCC-CCCCEEEEECCeeccCccHHHHHHHhh--
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRL-QKGDRILSINGKSMKGLTHKESLAILK-- 124 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrL-q~GDrILaINGv~V~~~s~~~aV~~lk-- 124 (548)
..+++.+.+.+. .+.+|||++.+..+ ..+++|..|.++|||+++| | ++||+|++|||+++.+++..++...+.
T Consensus 6 ~~~~~~v~l~~~-~~~glG~~~~~~~~--~~~~~V~~V~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 81 (127)
T 1b8q_A 6 EPNVISVRLFKR-KVGGLGFLVKERVS--KPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRGI 81 (127)
T ss_dssp CCCSEEEEEECT-TTSCCSCCEEECTT--SSCEEECCCSSSSSHHHHS-SCCTTTCCCEETTEECSSSCHHHHHHHHHSC
T ss_pred CCceEEEEEEeC-CCCcEeEEEEecCC--CCCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 456788999887 36899999987643 3589999999999999999 7 999999999999999976666554443
Q ss_pred CCCCeEEEEEecCcceeEEEec
Q psy6405 125 RGPPVEITLIKDGAGLGFSLEG 146 (548)
Q Consensus 125 ~g~~VtVtV~RdGkgLGfSItg 146 (548)
.+..+.++|.|++..+.+++..
T Consensus 82 ~g~~v~l~v~R~g~~~~~~~~~ 103 (127)
T 1b8q_A 82 ASETHVVLILRGPEGFTTHLET 103 (127)
T ss_dssp CSSCEEEEEECCCCSEEECCCC
T ss_pred CCCeEEEEEEeCCceEEEEEEE
Confidence 4678999999998887777764
No 163
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.04 E-value=1e-09 Score=94.90 Aligned_cols=90 Identities=26% Similarity=0.397 Sum_probs=75.0
Q ss_pred CCeEEEEEe-cCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc--
Q psy6405 127 PPVEITLIK-DGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL-- 203 (548)
Q Consensus 127 ~~VtVtV~R-dGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~-- 203 (548)
..++|++.| ...++||++.++.... +..+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++++|+..
T Consensus 5 ~~~~v~l~k~~~~~lG~~i~g~~~~~-~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 83 (108)
T 3cbz_A 5 NIITVTLNMEKYNFLGISIVGQSNER-GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVH 83 (108)
T ss_dssp CEEEEEECHHHHCCCCEEEEEECSST-TCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHT
T ss_pred eEEEEEEEeCCCCccCEEEEcCcCCC-CCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccc
Confidence 456777876 4578999998764321 234799999999999999999999999999999999999999999999987
Q ss_pred CCCceeEEEEeccc
Q psy6405 204 NDGTIQDIKALGYD 217 (548)
Q Consensus 204 ~g~~V~LlV~RilD 217 (548)
+...+.+++.|..+
T Consensus 84 ~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 84 KPGPIVLTVAKSGG 97 (108)
T ss_dssp SSSCEEEEEECCCC
T ss_pred CCCeEEEEEEeCCC
Confidence 45579999988644
No 164
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.03 E-value=3.5e-09 Score=91.18 Aligned_cols=91 Identities=33% Similarity=0.480 Sum_probs=76.9
Q ss_pred CCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc-CC
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL-ND 205 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~-~g 205 (548)
..+.+++.+...++||++........+..+++|..|.++|||+++|+|++||+|++|||+++.++++.++.++++.. .+
T Consensus 11 ~~~~~~l~~~~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g 90 (111)
T 2koj_A 11 KRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKME 90 (111)
T ss_dssp EEEEEEEECBTTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCS
T ss_pred cEEEEEEEECCCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 44677788888899999987654322335799999999999999998999999999999999999999999999986 36
Q ss_pred CceeEEEEeccc
Q psy6405 206 GTIQDIKALGYD 217 (548)
Q Consensus 206 ~~V~LlV~RilD 217 (548)
..+.+.+.|...
T Consensus 91 ~~v~l~v~R~~~ 102 (111)
T 2koj_A 91 GTVSLLVFRQEE 102 (111)
T ss_dssp SEEEEEEEECCC
T ss_pred CeEEEEEEeCCC
Confidence 788999988654
No 165
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.03 E-value=1.3e-09 Score=93.30 Aligned_cols=90 Identities=24% Similarity=0.398 Sum_probs=74.8
Q ss_pred CCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
..+.|++ |...++||+|.++........+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++.. +.
T Consensus 11 ~~~~v~l-~~~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~ 88 (106)
T 3axa_A 11 EIITVTL-KKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRT-SS 88 (106)
T ss_dssp CEEEEEE-ECSSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC-CS
T ss_pred eEEEEEE-CCCCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CC
Confidence 4466777 888899999986543222234799999999999999999999999999999999999999999999875 77
Q ss_pred ceeEEEEecccc
Q psy6405 207 TIQDIKALGYDL 218 (548)
Q Consensus 207 ~V~LlV~RilDL 218 (548)
.+.+.+.|....
T Consensus 89 ~v~l~v~R~~~~ 100 (106)
T 3axa_A 89 VVTLEVAKQGAI 100 (106)
T ss_dssp EEEEEEECCCSS
T ss_pred eEEEEEEeCCcc
Confidence 899999886543
No 166
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.03 E-value=1.1e-09 Score=95.10 Aligned_cols=86 Identities=27% Similarity=0.410 Sum_probs=73.0
Q ss_pred eEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC---C
Q psy6405 129 VEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN---D 205 (548)
Q Consensus 129 VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~---g 205 (548)
..|++.|. .++||+|.++.....+ .+++|..|.++|||+++|+|++||+|++|||+++.++++.+++++|+... +
T Consensus 17 ~~v~l~k~-~glG~~i~gg~~~~~~-~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~ 94 (109)
T 1wi4_A 17 RVITVTKE-TGLGLKILGGINRNEG-PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSE 94 (109)
T ss_dssp EEEEECCS-SCCCEEEEECSSSSSC-SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSS
T ss_pred EEEEEeCC-CccCEEEEeccCCCCC-CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccCCC
Confidence 56667664 8999999987643211 26999999999999999999999999999999999999999999999987 6
Q ss_pred CceeEEEEecc
Q psy6405 206 GTIQDIKALGY 216 (548)
Q Consensus 206 ~~V~LlV~Ril 216 (548)
..+++.+.|..
T Consensus 95 ~~~~l~v~R~~ 105 (109)
T 1wi4_A 95 SPWEIAFIRSG 105 (109)
T ss_dssp SCEEEEEECCC
T ss_pred ceEEEEEEeCC
Confidence 78888887753
No 167
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.02 E-value=2e-09 Score=91.39 Aligned_cols=87 Identities=30% Similarity=0.491 Sum_probs=75.3
Q ss_pred CCCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 125 RGPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 125 ~g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
+..+..|++.|.+.++||++..+... .+++|..|.++|||+++|+|++||+|++|||.++.++++.+++..++..
T Consensus 9 ~~~~~~v~l~k~~~glG~~~~~~~~~----~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~- 83 (104)
T 3i4w_A 9 PREPRRIVIHRGSTGLGFNIVGGEXG----EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNA- 83 (104)
T ss_dssp CSSCEEEEEECBTTBTSEEEEECC-C----CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTS-
T ss_pred CCccEEEEEEeCCCccCEEEECCCCC----CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 34567899999989999999887543 3699999999999999999999999999999999999999999888875
Q ss_pred CCceeEEEEecc
Q psy6405 205 DGTIQDIKALGY 216 (548)
Q Consensus 205 g~~V~LlV~Ril 216 (548)
+..+.+++.|..
T Consensus 84 ~~~v~l~v~r~~ 95 (104)
T 3i4w_A 84 GQTVTIIAQYKP 95 (104)
T ss_dssp CSEEEEEEEECH
T ss_pred CCeEEEEEEECc
Confidence 678888888753
No 168
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.02 E-value=9e-10 Score=94.12 Aligned_cols=85 Identities=22% Similarity=0.510 Sum_probs=74.2
Q ss_pred eEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC-CCc
Q psy6405 129 VEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN-DGT 207 (548)
Q Consensus 129 VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~-g~~ 207 (548)
+.+++.|...++||++..+.... .+++|..|.++|||+++|+|++||+|++|||+++.++++.+++++++..+ +..
T Consensus 11 ~~v~l~~~~~g~G~~i~~g~~~~---~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~ 87 (103)
T 1uep_A 11 LDVHLRRMESGFGFRILGGDEPG---QPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQ 87 (103)
T ss_dssp ECCEEESSSSSCCEEECCCCSTT---SCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTE
T ss_pred EEEEEEeCCCccCEEEeeecCCC---CCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCc
Confidence 56778888889999998765321 36899999999999999999999999999999999999999999998875 678
Q ss_pred eeEEEEecc
Q psy6405 208 IQDIKALGY 216 (548)
Q Consensus 208 V~LlV~Ril 216 (548)
+.+++.|..
T Consensus 88 v~l~v~R~~ 96 (103)
T 1uep_A 88 VNLTVRRKV 96 (103)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEeCC
Confidence 999998864
No 169
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.02 E-value=1e-09 Score=94.59 Aligned_cols=86 Identities=26% Similarity=0.338 Sum_probs=72.7
Q ss_pred CeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc----
Q psy6405 128 PVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL---- 203 (548)
Q Consensus 128 ~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~---- 203 (548)
...|.+.|.+.++||+|.++..... ..++|..|.+++||+++|+|++||+|++|||+++.++++.+++++|+..
T Consensus 7 ~~~v~l~k~~~glG~~i~gg~~~~~--~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~ 84 (103)
T 1ufx_A 7 GTLVRVKKSAATLGIAIEGGANTRQ--PLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTK 84 (103)
T ss_dssp SEEEEEECCSSSCCEEEECBTTSSC--SSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCS
T ss_pred eEEEEEEcCCCcCCeEEECCCCCCC--CcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccC
Confidence 4677888888999999998765421 1249999999999999999999999999999999999999999999986
Q ss_pred CCCceeEEEEec
Q psy6405 204 NDGTIQDIKALG 215 (548)
Q Consensus 204 ~g~~V~LlV~Ri 215 (548)
.+..+.+++.|.
T Consensus 85 ~~~~i~l~v~r~ 96 (103)
T 1ufx_A 85 DRDYIDFLVTEF 96 (103)
T ss_dssp SCSEEEEEECCC
T ss_pred CCCeEEEEEEEc
Confidence 566777777664
No 170
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.02 E-value=1.6e-09 Score=96.34 Aligned_cols=90 Identities=27% Similarity=0.569 Sum_probs=70.8
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCC--------CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHH
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYE--------SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKES 119 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~--------~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~a 119 (548)
..+++++.+.+. +..+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||+++.+++..++
T Consensus 22 ~~~p~~v~l~k~-~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~ 100 (123)
T 2iwq_A 22 SMQPRRVELWRE-PSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQA 100 (123)
T ss_dssp -CCCEEEEECCC-TTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHH
T ss_pred cCCCEEEEEEec-CCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 345688999887 4689999998764321 2479999999999999999999999999999999999877776
Q ss_pred HHHhh-CCCCeEEEEEecCc
Q psy6405 120 LAILK-RGPPVEITLIKDGA 138 (548)
Q Consensus 120 V~~lk-~g~~VtVtV~RdGk 138 (548)
+..++ .+..+.++|.|.+.
T Consensus 101 ~~~l~~~~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 101 VEAIRKAGNPVVFMVQSIIS 120 (123)
T ss_dssp HHHHHHCCSSEEEEEECCCC
T ss_pred HHHHHcCCCeEEEEEEECCc
Confidence 55443 35588888887543
No 171
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.01 E-value=2.3e-09 Score=92.51 Aligned_cols=86 Identities=34% Similarity=0.567 Sum_probs=74.8
Q ss_pred CCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
....|++.|.+.++||++..+... +++|..|.++|||+++|+|+.||+|++|||+++.++++.+++++++.. +.
T Consensus 15 ~~~~v~l~~~~~~lG~~l~~~~~~-----g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-g~ 88 (111)
T 2dlu_A 15 HVEEVELINDGSGLGFGIVGGKTS-----GVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNC-GN 88 (111)
T ss_dssp EEEEEEEECCSSCCCEEEECCSSS-----SBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHH-CS
T ss_pred ceEEEEEEeCCCccCEEEeccCCC-----CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CC
Confidence 346788889889999999876533 699999999999999999999999999999999999999999999886 67
Q ss_pred ceeEEEEecccc
Q psy6405 207 TIQDIKALGYDL 218 (548)
Q Consensus 207 ~V~LlV~RilDL 218 (548)
.+.+++.|....
T Consensus 89 ~v~l~v~R~~~~ 100 (111)
T 2dlu_A 89 SVRMLVARDPAG 100 (111)
T ss_dssp EEEEEEEESCTT
T ss_pred eEEEEEEeCCCC
Confidence 889999886543
No 172
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.01 E-value=7.7e-10 Score=94.24 Aligned_cols=84 Identities=27% Similarity=0.481 Sum_probs=68.5
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCC-------CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHH
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDY-------ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLA 121 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~-------~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~ 121 (548)
.+..++.+.+. .+|||++.++.+. ...+++|..|.++|||++ | |++||+|++|||.++.++++.+++.
T Consensus 10 ~~~~~v~l~~~---~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~ 84 (103)
T 1n7t_A 10 KQEIRVRVEKD---PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVS 84 (103)
T ss_dssp CCCEEEEEECS---SCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHHH
T ss_pred cEEEEEEEccC---CCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHHH
Confidence 44567778776 4899999987542 346899999999999999 9 9999999999999999998887665
Q ss_pred Hhh-CCCCeEEEEEecC
Q psy6405 122 ILK-RGPPVEITLIKDG 137 (548)
Q Consensus 122 ~lk-~g~~VtVtV~RdG 137 (548)
.+. .+..+.++|.|+.
T Consensus 85 ~~~~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 85 LLKTFQNTVELIIVREV 101 (103)
T ss_dssp HHHHCCSEEEEEEECCC
T ss_pred HhhcCCCeEEEEEEecC
Confidence 544 5777889988853
No 173
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.01 E-value=2.7e-09 Score=88.74 Aligned_cols=86 Identities=34% Similarity=0.636 Sum_probs=73.1
Q ss_pred CCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 126 GPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 126 g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
..+.+|++.|...++||++..+.... .+++|..|.++|||+++|.|++||+|++|||+++.++++.++.++++.. +
T Consensus 4 ~~~r~v~l~k~~~glG~~l~~~~~~~---~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~ 79 (93)
T 2dkr_A 4 GSSGVVELPKTDEGLGFNIMGGKEQN---SPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAA-Q 79 (93)
T ss_dssp SCSCEEEEECCTTCCCEEEECSSSSS---CCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHC-C
T ss_pred CCCEEEEEEeCCCCccEEEecccCCC---CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-C
Confidence 45678999999999999998764321 3699999999999999955999999999999999999999999999886 4
Q ss_pred CceeEEEEec
Q psy6405 206 GTIQDIKALG 215 (548)
Q Consensus 206 ~~V~LlV~Ri 215 (548)
..+.+++.|.
T Consensus 80 ~~v~l~v~r~ 89 (93)
T 2dkr_A 80 GSVKLVVRSG 89 (93)
T ss_dssp SEEEEEECCC
T ss_pred CcEEEEEEeC
Confidence 5778887764
No 174
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.01 E-value=1.4e-09 Score=89.83 Aligned_cols=84 Identities=29% Similarity=0.462 Sum_probs=71.0
Q ss_pred CCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
..+.|++ +.+.++||++.++.... .+++|..|.++|||+++| |++||+|++|||.++.++++.++.++++.. +.
T Consensus 3 ~~~~v~l-~~~~~~G~~l~~g~~~~---~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~ 76 (88)
T 2uzc_A 3 SNYSVSL-VGPAPWGFRLQGGKDFN---MPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGC-TG 76 (88)
T ss_dssp CEEEEEE-ESSSCCCEEEEEEGGGT---EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC-CS
T ss_pred cEEEEEE-cCCCcccEEEECcCCCC---CCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC-CC
Confidence 3466777 66788999998755331 358999999999999999 999999999999999999999999999876 77
Q ss_pred ceeEEEEecc
Q psy6405 207 TIQDIKALGY 216 (548)
Q Consensus 207 ~V~LlV~Ril 216 (548)
.+.+.+.|..
T Consensus 77 ~v~l~v~R~g 86 (88)
T 2uzc_A 77 SLNMTLQRES 86 (88)
T ss_dssp EEEEEEECCC
T ss_pred eEEEEEEeCC
Confidence 8888888754
No 175
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.00 E-value=1.9e-09 Score=91.97 Aligned_cols=88 Identities=25% Similarity=0.431 Sum_probs=67.8
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCC-CCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh--
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSD-YESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-- 124 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d-~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-- 124 (548)
..+++.+.+.+.. +.+|||++..... ....+++|..|.++|||+++|.|++||+|++|||+++.++++.+++..++
T Consensus 7 ~~~~~~v~l~k~~-g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~ 85 (101)
T 2yt7_A 7 GDNCREVHLEKRR-GEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRET 85 (101)
T ss_dssp TCCCEEEEEECCT-TCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHT
T ss_pred CCceEEEEEEeCC-CCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4567889998873 6799999985221 11226999999999999994449999999999999997777777654443
Q ss_pred -CCCCeEEEEEec
Q psy6405 125 -RGPPVEITLIKD 136 (548)
Q Consensus 125 -~g~~VtVtV~Rd 136 (548)
.+..++++|.|.
T Consensus 86 ~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 86 KSQTSVTLSIVHC 98 (101)
T ss_dssp TTSSEEEEEECCC
T ss_pred CCCCeEEEEEEeC
Confidence 567788888774
No 176
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.00 E-value=1e-09 Score=92.22 Aligned_cols=83 Identities=20% Similarity=0.411 Sum_probs=66.6
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RG 126 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g 126 (548)
...++.|.+.|. ...+|||++... ..+++|..|.++|||+++|.|++||+|++|||+++ +.+..++...++ .+
T Consensus 4 ~~~~r~v~l~k~-~~~~lG~~i~~~----~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~ 77 (91)
T 2e7k_A 4 GSSGRMVGIRKT-AGEHLGVTFRVE----GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNAS 77 (91)
T ss_dssp CCCSCBCCBCCC-TTCCCCEEEEES----SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCC
T ss_pred CCCcEEEEEEEC-CCCcEeEEEEec----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCC
Confidence 345677888876 478999999973 35899999999999999877999999999999999 666666654443 46
Q ss_pred CCeEEEEEec
Q psy6405 127 PPVEITLIKD 136 (548)
Q Consensus 127 ~~VtVtV~Rd 136 (548)
..+.++|.|.
T Consensus 78 ~~v~l~v~~~ 87 (91)
T 2e7k_A 78 GSVILKILSG 87 (91)
T ss_dssp SSBCEEEECC
T ss_pred CeEEEEEEEC
Confidence 6788888764
No 177
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.00 E-value=1.7e-09 Score=90.38 Aligned_cols=85 Identities=22% Similarity=0.313 Sum_probs=71.2
Q ss_pred CCCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 125 RGPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 125 ~g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
+..+..+++.|.+.++||++...... .+++|..|.++|||+++| |++||+|++|||.++.++++.++.++++..
T Consensus 3 p~~~r~v~l~~~~~~~G~~l~~~~~~----~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~- 76 (95)
T 3r68_A 3 PHQPRVVVIKKGSNGYGFYLRAGPEQ----KGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKG- 76 (95)
T ss_dssp CCCCEEEEEECBTTBCSCEEEEC--C----CSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTT-
T ss_pred CCCcEEEEEecCCCcccEEEEecCCC----CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC-
Confidence 34567899999999999999876543 269999999999999999 999999999999999999999999999985
Q ss_pred CCceeEEEEec
Q psy6405 205 DGTIQDIKALG 215 (548)
Q Consensus 205 g~~V~LlV~Ri 215 (548)
+..+.+++.|.
T Consensus 77 ~~~~~~~~~r~ 87 (95)
T 3r68_A 77 GDQTTLLVLDK 87 (95)
T ss_dssp TTEEEEEEEEC
T ss_pred CCeEEEEEECC
Confidence 55666665553
No 178
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.00 E-value=1.5e-09 Score=96.68 Aligned_cols=85 Identities=33% Similarity=0.589 Sum_probs=67.7
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHh---hC
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAIL---KR 125 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~l---k~ 125 (548)
..++.+.+.+ ..+|||++.++.+ .+++|..|.++|||+++| |++||+|++|||++|.++++.+++..+ ..
T Consensus 28 p~~~~~~~~~---~~~lG~~l~~~~~---~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 100 (124)
T 3tsv_A 28 PSMKLVKFRK---GDSVGLRLAGGND---VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPK 100 (124)
T ss_dssp CCCEEEEEEC---SSCCCEEEEECTT---SCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSCT
T ss_pred CCeEEEEcCC---CCceeEEEecCCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCC
Confidence 4445554444 4799999997654 589999999999999999 999999999999999999776654433 46
Q ss_pred CCCeEEEEEecCcce
Q psy6405 126 GPPVEITLIKDGAGL 140 (548)
Q Consensus 126 g~~VtVtV~RdGkgL 140 (548)
+..+.|+|.|.+..+
T Consensus 101 g~~v~l~v~R~~~~~ 115 (124)
T 3tsv_A 101 GEEVTILAQKKKDVY 115 (124)
T ss_dssp TCEEEEEEEECHHHH
T ss_pred CCEEEEEEEECCchh
Confidence 788999999876543
No 179
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.00 E-value=4e-09 Score=90.54 Aligned_cols=89 Identities=25% Similarity=0.343 Sum_probs=74.6
Q ss_pred CCeEEEEEecCcceeEEEecCCCCC-----CCCCCeEEEEeccCChhhhc-CCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSP-----FGDQPLTVKKIFTGGCAEKN-GQLKAGDEILTINNVPVTEMSRIEAWSLL 200 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~-----lG~~gI~VssV~pgSpAeka-GrLq~GDrILaVNGvsV~~~t~~EavelL 200 (548)
.+++|++.|...++||+|.++.... ....+++|..|.++|||+++ | |++||+|++|||+++.++++.+++.++
T Consensus 8 ~~~~v~l~k~~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~agg-L~~GD~Il~vng~~v~~~~~~~~~~~~ 86 (107)
T 1uhp_A 8 KSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGG-LQIHDRIIEVNGRDLSRATHDQAVEAF 86 (107)
T ss_dssp EEEEEEECCSSSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTC-CCSSCEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEEEEEeCCCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3577888898899999998765321 12347999999999999999 6 999999999999999999999999999
Q ss_pred HHcCCCceeEEEEeccc
Q psy6405 201 KKLNDGTIQDIKALGYD 217 (548)
Q Consensus 201 rs~~g~~V~LlV~RilD 217 (548)
+.. +..+.+++.|...
T Consensus 87 ~~~-~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 87 KTA-KEPIVVQVLRRTS 102 (107)
T ss_dssp HHC-CSSEEEEEEECCS
T ss_pred HcC-CCcEEEEEEeCCC
Confidence 986 6788888887543
No 180
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.00 E-value=6.5e-10 Score=92.67 Aligned_cols=84 Identities=21% Similarity=0.254 Sum_probs=71.6
Q ss_pred CCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
.+..|++.|...++||++...... .+++|..|.++|||+++| |++||+|++|||.++.++++.++.++++.. +.
T Consensus 3 ~pr~v~l~k~~~~~G~~l~~~~~~----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~ 76 (91)
T 2vsp_A 3 KPKLCRLAKGENGYGFHLNAIRGL----PGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSS-GK 76 (91)
T ss_dssp CEEEEEEECBTTBTSCCCBCCTTC----SCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTS-CS
T ss_pred CcEEEEEEeCCCcccEEEEeccCC----CCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-CC
Confidence 467889999888999999765432 368999999999999999 999999999999999999999999999887 78
Q ss_pred ceeEEEEecc
Q psy6405 207 TIQDIKALGY 216 (548)
Q Consensus 207 ~V~LlV~Ril 216 (548)
.+.+.+.|..
T Consensus 77 ~v~l~v~r~~ 86 (91)
T 2vsp_A 77 NVTLLVCGKK 86 (91)
T ss_dssp EEEEEEEC--
T ss_pred EEEEEEEeCC
Confidence 8999888754
No 181
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.00 E-value=3.3e-09 Score=88.26 Aligned_cols=85 Identities=32% Similarity=0.430 Sum_probs=72.8
Q ss_pred CCeEEEEEec-CcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 127 PPVEITLIKD-GAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 127 ~~VtVtV~Rd-GkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
..++|++.|. +.++||++...... .+++|..|.++|||+++|+|++||+|++|||.++.+.++.++..+++.. +
T Consensus 4 ~~~~v~l~k~~~~~lG~~~~~~~~~----~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~ 78 (92)
T 2qg1_A 4 DTLTIGLQKKPGKGLGLSIVGKRND----TGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCS-L 78 (92)
T ss_dssp CEEEEEEECCTTSCCSEEEECCSSS----CSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHC-C
T ss_pred eEEEEEEEeCCCCcccEEEEeccCC----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-C
Confidence 4578888874 58899999876532 3699999999999999999999999999999999999999999998875 6
Q ss_pred CceeEEEEecc
Q psy6405 206 GTIQDIKALGY 216 (548)
Q Consensus 206 ~~V~LlV~Ril 216 (548)
..+.+.+.|..
T Consensus 79 ~~v~l~v~R~~ 89 (92)
T 2qg1_A 79 GTVTLEVGRIS 89 (92)
T ss_dssp SEEEEEEECCC
T ss_pred CeEEEEEEccc
Confidence 67888888754
No 182
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.00 E-value=3.3e-09 Score=93.61 Aligned_cols=90 Identities=34% Similarity=0.519 Sum_probs=76.0
Q ss_pred CCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC-
Q psy6405 126 GPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN- 204 (548)
Q Consensus 126 g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~- 204 (548)
...+.+++.+...++||++........+..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++++++..+
T Consensus 29 ~~~~~v~l~~~~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~ 108 (121)
T 2kom_A 29 GKRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKM 108 (121)
T ss_dssp CEEEEEEEECCTTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCS
T ss_pred CeEEEEEEEcCCCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Confidence 3447777788888899999876543333457999999999999999999999999999999999999999999999863
Q ss_pred CCceeEEEEec
Q psy6405 205 DGTIQDIKALG 215 (548)
Q Consensus 205 g~~V~LlV~Ri 215 (548)
+..+.+.+.|.
T Consensus 109 g~~v~l~v~R~ 119 (121)
T 2kom_A 109 EGTVSLLVFRQ 119 (121)
T ss_dssp SCEEEEEEEEC
T ss_pred CCEEEEEEEeC
Confidence 67888888875
No 183
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.00 E-value=8.7e-10 Score=93.86 Aligned_cols=87 Identities=24% Similarity=0.402 Sum_probs=68.8
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhc-CCCCCCCEEEEECCeeccCccHHHHHHHhh-C
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRD-GRLQKGDRILSINGKSMKGLTHKESLAILK-R 125 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqA-GrLq~GDrILaINGv~V~~~s~~~aV~~lk-~ 125 (548)
.++.+.+.+.... ..+|||++.++.+. ..+++|..|.++|||+++ | |++||+|++|||+++.++ +.+++..++ .
T Consensus 7 ~~~~~~~~v~~~~-~~~~G~~~~gg~~~-~~~v~V~~V~~~spA~~agG-L~~GD~I~~ing~~v~~~-~~~~~~~~~~~ 82 (100)
T 2edp_A 7 GGSFQYVPVQLQG-GAPWGFTLKGGLEH-CEPLTVSKIEDGGKAALSQK-MRTGDELVNINGTPLYGS-RQEALILIKGS 82 (100)
T ss_dssp CCCCEEEEEECCS-CSCCCCCEEEEGGG-TEEEEECCCCTTSHHHHHTS-CCTTCEEEEETTEECCSC-SHHHHHHHHTC
T ss_pred CCCcEEEEEEECC-CCCcCEEEeccCCC-CCCeEEEEECCCCHHHHcCC-CCCCCEEEEECCEEccch-HHHHHHHHHhC
Confidence 4556666666653 46999999987653 246899999999999999 8 999999999999999987 555554444 4
Q ss_pred CCCeEEEEEecCc
Q psy6405 126 GPPVEITLIKDGA 138 (548)
Q Consensus 126 g~~VtVtV~RdGk 138 (548)
+..+.++|.|++.
T Consensus 83 ~~~v~l~v~R~~~ 95 (100)
T 2edp_A 83 FRILKLIVRRRNS 95 (100)
T ss_dssp CSSCEEEEEECCC
T ss_pred CCeEEEEEEeCCC
Confidence 6788999999765
No 184
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.00 E-value=4e-10 Score=94.66 Aligned_cols=83 Identities=25% Similarity=0.455 Sum_probs=66.2
Q ss_pred EEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhC-CCCeEEE
Q psy6405 54 VVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKR-GPPVEIT 132 (548)
Q Consensus 54 V~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~-g~~VtVt 132 (548)
+.+.++. ..+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||+++.++++.++...+.. +..+.++
T Consensus 8 ~~~~~~~-~~~lG~~l~~g~~~-~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~ 84 (94)
T 1vb7_A 8 LTVDVAG-PAPWGFRISGGRDF-HTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQ 84 (94)
T ss_dssp EEEEECS-SSCCSBCCEEETTT-TEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEE
T ss_pred EEEEecC-CCCccEEEecccCC-CCCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEE
Confidence 3344442 57999999987653 3578999999999999999 99999999999999999977776655543 3778999
Q ss_pred EEecCcc
Q psy6405 133 LIKDGAG 139 (548)
Q Consensus 133 V~RdGkg 139 (548)
|.|++..
T Consensus 85 v~R~g~~ 91 (94)
T 1vb7_A 85 LDRSSGP 91 (94)
T ss_dssp EECCCCC
T ss_pred EEECCcC
Confidence 9997654
No 185
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.00 E-value=2.2e-09 Score=89.58 Aligned_cols=80 Identities=21% Similarity=0.320 Sum_probs=68.6
Q ss_pred eEEEEEec-CcceeEEEecCCCCCCCCCCeEEEEeccCChhhh-cCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 129 VEITLIKD-GAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEK-NGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 129 VtVtV~Rd-GkgLGfSItgg~~s~lG~~gI~VssV~pgSpAek-aGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
..|.+.|. +.++|+++..... .+++|.+|.++|||++ +| |++||+|++|||+++.++++.+++++++..++
T Consensus 3 r~V~l~K~~~~~lG~~i~~~~~-----~~~~I~~V~~gspA~~~ag-L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~- 75 (88)
T 1kwa_A 3 RLVQFQKNTDEPMGITLKMNEL-----NHCIVARIMHGGMIHRQGT-LHVGDEIREINGISVANQTVEQLQKMLREMRG- 75 (88)
T ss_dssp EEEEEEECSSSCCCEEEECSCG-----GGEEEEEECTTSHHHHHTC-CCTTCEEEEETTEEGGGSCHHHHHHHHHHCCE-
T ss_pred EEEEEEeCCCCceeEEEEeCCC-----CCEEEEEECCCCHHHHcCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCC-
Confidence 45778876 5889999987432 2599999999999999 66 99999999999999999999999999999865
Q ss_pred ceeEEEEec
Q psy6405 207 TIQDIKALG 215 (548)
Q Consensus 207 ~V~LlV~Ri 215 (548)
.+.+.+.|.
T Consensus 76 ~v~l~v~r~ 84 (88)
T 1kwa_A 76 SITFKIVPS 84 (88)
T ss_dssp EEEEEEECC
T ss_pred cEEEEEECC
Confidence 788888764
No 186
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.00 E-value=1.1e-09 Score=93.73 Aligned_cols=90 Identities=38% Similarity=0.498 Sum_probs=76.7
Q ss_pred CCeEEEEEecCcceeEEEecCCCCC---CCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSP---FGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL 203 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~---lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~ 203 (548)
..++|++.|...++||+|.++.... .+..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..
T Consensus 7 ~~~~v~l~~~~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 86 (105)
T 1wha_A 7 GRHVACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAA 86 (105)
T ss_dssp EEEEEEECCCTTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSC
T ss_pred eeEEEEEEeCCCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3477888898899999999876521 1235799999999999999999999999999999999999999999999876
Q ss_pred CCCceeEEEEeccc
Q psy6405 204 NDGTIQDIKALGYD 217 (548)
Q Consensus 204 ~g~~V~LlV~RilD 217 (548)
+..+.+++.|..+
T Consensus 87 -g~~v~l~v~R~~~ 99 (105)
T 1wha_A 87 -SPTIALLLEREAG 99 (105)
T ss_dssp -CSCEEEEEEECCC
T ss_pred -CCeEEEEEEECCC
Confidence 6788999988643
No 187
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.00 E-value=3e-09 Score=89.27 Aligned_cols=89 Identities=21% Similarity=0.221 Sum_probs=75.3
Q ss_pred CCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
.+..|++.|...++||++....... +..+++|..|.++|||+++| |++||+|++|||.++.++++.++.++++.. +.
T Consensus 3 ~~r~v~l~k~~~~~G~~l~~~~~~~-~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~ 79 (96)
T 2v90_A 3 KPRCLHLEKGPQGFGFLLREEKGLD-GRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQ-GS 79 (96)
T ss_dssp CCEEEEEECBTTBSCEEEEEEECTT-SCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTT-TT
T ss_pred CCEEEEEEeCCCcccEEEEeccCCC-CCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-CC
Confidence 4678999999899999997632111 12369999999999999999 999999999999999999999999999986 78
Q ss_pred ceeEEEEecccc
Q psy6405 207 TIQDIKALGYDL 218 (548)
Q Consensus 207 ~V~LlV~RilDL 218 (548)
.+.+.+.|....
T Consensus 80 ~v~l~v~r~~~~ 91 (96)
T 2v90_A 80 CVSLTVVDPEAD 91 (96)
T ss_dssp EEEEEEECCCTT
T ss_pred EEEEEEECCCCc
Confidence 899999887543
No 188
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.99 E-value=6.1e-10 Score=98.28 Aligned_cols=94 Identities=16% Similarity=0.289 Sum_probs=74.6
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh--C
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK--R 125 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk--~ 125 (548)
...++.+.+.+. ..+|||++.++.+ ..+++|..|.++|||+++| |++||+|++|||+++.+++..++...+. .
T Consensus 7 ~~~~r~v~l~~~--~~g~G~~l~~~~~--~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 81 (128)
T 2kjd_A 7 MLRPRLCTMKKG--PSGYGFNLHSDKS--KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGG 81 (128)
T ss_dssp TCCCEEEEEECC--SSSCCEEEEECSS--SCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTC
T ss_pred CCCcEEEEEecC--CCcccEEEEecCC--CCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 456788999987 5789999997654 3589999999999999999 9999999999999999976666554443 3
Q ss_pred CCCeEEEEEecCccee--EEEec
Q psy6405 126 GPPVEITLIKDGAGLG--FSLEG 146 (548)
Q Consensus 126 g~~VtVtV~RdGkgLG--fSItg 146 (548)
+..+.++|.|++.... ++++.
T Consensus 82 ~~~~~l~v~R~g~~~~~~~~l~~ 104 (128)
T 2kjd_A 82 DETKLLVVDRETDEFFKKCRVIP 104 (128)
T ss_dssp SEEEEEEECHHHHHHHHHHTCCC
T ss_pred CCEEEEEEEeCCcceEEEEEEEe
Confidence 5567788888876655 44443
No 189
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.99 E-value=2.3e-09 Score=93.22 Aligned_cols=89 Identities=29% Similarity=0.433 Sum_probs=75.1
Q ss_pred hCCCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc
Q psy6405 124 KRGPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL 203 (548)
Q Consensus 124 k~g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~ 203 (548)
.+.....|++.|.+.++||++.++.... .+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..
T Consensus 21 ~~~~~~~v~l~~~~~glG~~l~~~~~~~---~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 97 (112)
T 2r4h_A 21 QSMDFYTVELERGAKGFGFSLRGGREYN---MDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNG 97 (112)
T ss_dssp --CCEEEEEEECBTTBTSEEEEECGGGT---CCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred CCCceEEEEEEcCCCccCEEEeccccCC---CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3466788999998889999998764321 3699999999999999999999999999999999999999999999874
Q ss_pred CCCceeEEEEecc
Q psy6405 204 NDGTIQDIKALGY 216 (548)
Q Consensus 204 ~g~~V~LlV~Ril 216 (548)
+..+.+++.|..
T Consensus 98 -g~~v~l~v~R~~ 109 (112)
T 2r4h_A 98 -GRRVRLFLKRGE 109 (112)
T ss_dssp -TTEEEEEEECCE
T ss_pred -CCeEEEEEEeCC
Confidence 678888887753
No 190
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.99 E-value=5.1e-09 Score=88.18 Aligned_cols=86 Identities=27% Similarity=0.410 Sum_probs=72.8
Q ss_pred CeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCc
Q psy6405 128 PVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGT 207 (548)
Q Consensus 128 ~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~ 207 (548)
.++|++.|.+.++||++....... .+++|..|.++|||+++|+|++||+|++|||.++.++++.++.++++. .+..
T Consensus 6 ~~~v~l~~~~~~lG~~i~~~~~~~---~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~-~g~~ 81 (97)
T 1n7e_A 6 IYTVELKRYGGPLGITISGTEEPF---DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQM-AGET 81 (97)
T ss_dssp EEEEEEECTTSCCCEEEECCSSTT---SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHT-CCSE
T ss_pred EEEEEEEeCCCCcCEEEEcccCCC---CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCe
Confidence 366777788778999998765321 369999999999999999999999999999999999999999999984 4778
Q ss_pred eeEEEEeccc
Q psy6405 208 IQDIKALGYD 217 (548)
Q Consensus 208 V~LlV~RilD 217 (548)
+.+.+.|...
T Consensus 82 v~l~v~R~~~ 91 (97)
T 1n7e_A 82 VTLKIKKQTD 91 (97)
T ss_dssp EEEEEECCCC
T ss_pred EEEEEEeCCC
Confidence 8898887654
No 191
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.98 E-value=4.6e-09 Score=87.99 Aligned_cols=85 Identities=21% Similarity=0.281 Sum_probs=72.5
Q ss_pred CeEEEEEec--CcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 128 PVEITLIKD--GAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 128 ~VtVtV~Rd--GkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
.+.|++.|. +.++||++.+.... .+++|..|.++|||+++|+|++||+|++|||.++.++++.++...++.. +
T Consensus 4 ~~~v~l~k~~~~~~lG~~~~~~~~~----~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g 78 (95)
T 2vwr_A 4 ILQVALHKRDSGEQLGIKLVRRTDE----PGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQAS-G 78 (95)
T ss_dssp EEEEEEECSSTTCCCCEEEEECSSS----CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC-C
T ss_pred EEEEEEEECCCCCcccEEEEeccCC----CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-C
Confidence 367888874 46799999876543 3699999999999999999999999999999999999999999999876 7
Q ss_pred CceeEEEEeccc
Q psy6405 206 GTIQDIKALGYD 217 (548)
Q Consensus 206 ~~V~LlV~RilD 217 (548)
..+.+.+.|...
T Consensus 79 ~~v~l~v~R~~~ 90 (95)
T 2vwr_A 79 ERVNLTIARPGK 90 (95)
T ss_dssp SEEEEEEEEESC
T ss_pred CEEEEEEEcCCc
Confidence 788999988643
No 192
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.98 E-value=7.4e-10 Score=95.40 Aligned_cols=87 Identities=36% Similarity=0.632 Sum_probs=73.0
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RG 126 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g 126 (548)
..+++.|.+.|. ..+|||++.++.+ ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..+. .+
T Consensus 13 ~~~~~~v~l~k~--~~glG~~l~~~~~--~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~ 88 (113)
T 1um7_A 13 AREPRKIILHKG--STGLGFNIVGGED--GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAG 88 (113)
T ss_dssp CCSEEEEEEECC--SSCSSBCCBCCST--TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCC
T ss_pred CCceEEEEEEEC--CCcccEEEEeccC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 467899999987 5899999997654 358999999999999999999999999999999999998777665444 46
Q ss_pred CCeEEEEEecCc
Q psy6405 127 PPVEITLIKDGA 138 (548)
Q Consensus 127 ~~VtVtV~RdGk 138 (548)
..+.++|.|.+.
T Consensus 89 ~~v~l~v~r~~~ 100 (113)
T 1um7_A 89 QSVTIVAQYRPE 100 (113)
T ss_dssp SEEEEEEECCHH
T ss_pred CcEEEEEEECcc
Confidence 678888887654
No 193
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.98 E-value=4.6e-10 Score=95.06 Aligned_cols=83 Identities=24% Similarity=0.365 Sum_probs=69.9
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RG 126 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g 126 (548)
....++|.|.+.....+|||.+.+ ..+++|..|.++|||+ +| |++||+|++|||+++.++++.+++..++ .+
T Consensus 6 ~~~~~~v~l~~~~~~~~~G~~l~~-----~~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~g 78 (96)
T 2edv_A 6 SGVRHTVKIDKDTLLQDYGFHISE-----SLPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILREAE 78 (96)
T ss_dssp SCEEEEEEECCCSSSCSCSBCCCS-----SSSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHHCS
T ss_pred CCccEEEEEEECCCCCcccEEEec-----CCCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 455788999988534689999985 2478999999999996 88 9999999999999999998888766555 78
Q ss_pred CCeEEEEEecC
Q psy6405 127 PPVEITLIKDG 137 (548)
Q Consensus 127 ~~VtVtV~RdG 137 (548)
..+.++|.|++
T Consensus 79 ~~v~l~v~R~~ 89 (96)
T 2edv_A 79 DSLSITVVRCT 89 (96)
T ss_dssp SCEEEEEEECC
T ss_pred CeEEEEEEECC
Confidence 89999999975
No 194
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.98 E-value=1.2e-09 Score=96.48 Aligned_cols=89 Identities=18% Similarity=0.287 Sum_probs=69.5
Q ss_pred CCCeEEEEEeeCCCC-CceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhCC
Q psy6405 48 TSEVSVVVLHRDLPG-NSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKRG 126 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~-~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~g 126 (548)
...++.+.+.|.... .+|||++.+..+....+++|..|.++|||+++| |++||+|++|||+++.++++.++...++ +
T Consensus 13 ~~~~~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~-~ 90 (114)
T 2d8i_A 13 PKVTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLS-Q 90 (114)
T ss_dssp CCEEEEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHT-S
T ss_pred cCceEEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHh-C
Confidence 356789999988522 279999986433222479999999999999999 9999999999999999987666655555 4
Q ss_pred CCeEEEEEecCc
Q psy6405 127 PPVEITLIKDGA 138 (548)
Q Consensus 127 ~~VtVtV~RdGk 138 (548)
..+.|+|.|...
T Consensus 91 ~~v~l~v~R~p~ 102 (114)
T 2d8i_A 91 PSLGLLVRTYPE 102 (114)
T ss_dssp SEEEEEEEECCC
T ss_pred CcEEEEEEECCC
Confidence 578888887543
No 195
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.97 E-value=3.1e-09 Score=93.08 Aligned_cols=86 Identities=33% Similarity=0.528 Sum_probs=67.6
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RG 126 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g 126 (548)
...+++|.+.+. +.++|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||.++.+.+..+++..+. .+
T Consensus 22 ~~~~~~V~l~~~-~~~~lG~~l~~~~~~-~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~ 99 (114)
T 2gzv_A 22 SMVPGKVTLQKD-AQNLIGISIGGGAQY-CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 99 (114)
T ss_dssp CCCCEEEEEECC-TTSCCSEEEEECCC---CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred cCCCEEEEEEEC-CCCcEeEEEEeCCCC-CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 456789999988 367799999987643 247999999999999999999999999999999997766666554443 34
Q ss_pred CCeEEEEEe
Q psy6405 127 PPVEITLIK 135 (548)
Q Consensus 127 ~~VtVtV~R 135 (548)
..+.++|.+
T Consensus 100 ~~v~l~v~~ 108 (114)
T 2gzv_A 100 GEVTIHYNK 108 (114)
T ss_dssp SEEEEEEEC
T ss_pred CeEEEEEEe
Confidence 456777654
No 196
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.97 E-value=2.2e-09 Score=92.29 Aligned_cols=85 Identities=19% Similarity=0.316 Sum_probs=64.6
Q ss_pred CCeEEEEEeeCCC-CCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhCCC
Q psy6405 49 SEVSVVVLHRDLP-GNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKRGP 127 (548)
Q Consensus 49 ~d~~tV~L~Kd~~-~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~g~ 127 (548)
...+.+.+.|... ..+|||++.........+++|..|.++|||+++| |++||+|++|||+++.+++..++...+. ..
T Consensus 5 ~~~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~-~~ 82 (94)
T 3kzd_A 5 KVTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLS-QP 82 (94)
T ss_dssp CEEEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHH-SS
T ss_pred cceeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHh-CC
Confidence 3568889998742 3589999987543333579999999999999999 9999999999999999988777665554 45
Q ss_pred CeEEEEEe
Q psy6405 128 PVEITLIK 135 (548)
Q Consensus 128 ~VtVtV~R 135 (548)
.++++|..
T Consensus 83 ~l~ltV~~ 90 (94)
T 3kzd_A 83 SLGLLVRT 90 (94)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEe
Confidence 56676653
No 197
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.97 E-value=2.1e-09 Score=90.41 Aligned_cols=86 Identities=24% Similarity=0.242 Sum_probs=72.9
Q ss_pred eEEEEEe-cCcceeEEEecCCCCCC---CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 129 VEITLIK-DGAGLGFSLEGGKDSPF---GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 129 VtVtV~R-dGkgLGfSItgg~~s~l---G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
..+++.| ...++||+|.++..... ...+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++. .
T Consensus 7 ~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~ 85 (98)
T 1ihj_A 7 HMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKE-A 85 (98)
T ss_dssp EEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHH-S
T ss_pred EEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc-C
Confidence 4688888 77889999987654321 12368999999999999999999999999999999999999999999988 5
Q ss_pred CCceeEEEEec
Q psy6405 205 DGTIQDIKALG 215 (548)
Q Consensus 205 g~~V~LlV~Ri 215 (548)
+..+.+.+.|.
T Consensus 86 g~~v~l~v~R~ 96 (98)
T 1ihj_A 86 DFKIELEIQTF 96 (98)
T ss_dssp CSEEEEEEEEC
T ss_pred CCeEEEEEEeC
Confidence 78899999885
No 198
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.97 E-value=2.9e-09 Score=88.31 Aligned_cols=87 Identities=22% Similarity=0.400 Sum_probs=62.0
Q ss_pred eEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCCCe
Q psy6405 51 VSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGPPV 129 (548)
Q Consensus 51 ~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~~V 129 (548)
+..+.+.+......|||.+. .+++|..|.++|||+++|+|++||+|++|||.++.+++..++...+. .+..+
T Consensus 3 ~~~v~~~~~~~~~~~g~~~~-------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v 75 (92)
T 3cyy_A 3 PTKVTLVKSAKNEEYGLRLA-------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKL 75 (92)
T ss_dssp CEEEEEECSSTTSCCCEEEE-------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred cEEEEEEeCCCCCCCCEEEe-------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcE
Confidence 45566655544678998876 36899999999999999999999999999999999777666554443 34578
Q ss_pred EEEEEecCcceeEEE
Q psy6405 130 EITLIKDGAGLGFSL 144 (548)
Q Consensus 130 tVtV~RdGkgLGfSI 144 (548)
.++|.|++..+.+++
T Consensus 76 ~l~v~r~g~~~~~~v 90 (92)
T 3cyy_A 76 KMVVQRDERATLLNV 90 (92)
T ss_dssp EEEEEC---------
T ss_pred EEEEEeCCceeeeeC
Confidence 899999877655544
No 199
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.97 E-value=1.9e-09 Score=95.36 Aligned_cols=99 Identities=21% Similarity=0.297 Sum_probs=73.8
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCC-CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhCC
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDY-ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKRG 126 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~-~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~g 126 (548)
..+.+.+.+.+...+.+|||++....+. ...+++|..|.++|||+++|+|++||+|++|||++|.++.....+.....+
T Consensus 17 ~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~l~~~~g 96 (124)
T 1wh1_A 17 ELELEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLTSEEN 96 (124)
T ss_dssp SCEECCBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHHHHHHHTCSSC
T ss_pred cceEEEEEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHHHHHHHHhCCC
Confidence 3445556666665567899999865321 125899999999999999999999999999999999976544433222357
Q ss_pred CCeEEEEEecCcceeEEEec
Q psy6405 127 PPVEITLIKDGAGLGFSLEG 146 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItg 146 (548)
..+.|+|.|++..+......
T Consensus 97 ~~v~l~v~R~g~~~~~~~~~ 116 (124)
T 1wh1_A 97 KNFSLLIARPELQLDEGWMD 116 (124)
T ss_dssp CSCCEEEEECSSCCCCCCCC
T ss_pred CEEEEEEEECCEEeecccCC
Confidence 88999999988766554443
No 200
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.97 E-value=3.2e-09 Score=87.62 Aligned_cols=83 Identities=27% Similarity=0.333 Sum_probs=69.3
Q ss_pred EEEEEe-cCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCce
Q psy6405 130 EITLIK-DGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTI 208 (548)
Q Consensus 130 tVtV~R-dGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V 208 (548)
++++.+ ...++||++.++.... .+++|..|.++|||+++| |++||+|++|||.++.++++.++.++++..+ ..+
T Consensus 3 ~~~v~~~~~~~lG~~l~~~~~~~---~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v 77 (87)
T 2pa1_A 3 ALTVDVAGPAPWGFRITGGRDFH---TPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSP-SPL 77 (87)
T ss_dssp EEEEEECSSSCCSEEEEEEGGGT---EEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCC-SSE
T ss_pred EEEEEECCCCccCEEEecccCCC---CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeE
Confidence 444443 5567999998765421 258999999999999999 9999999999999999999999999999885 789
Q ss_pred eEEEEeccc
Q psy6405 209 QDIKALGYD 217 (548)
Q Consensus 209 ~LlV~RilD 217 (548)
.+.+.|...
T Consensus 78 ~l~v~R~~~ 86 (87)
T 2pa1_A 78 RLQLDRITS 86 (87)
T ss_dssp EEEEEECCC
T ss_pred EEEEEecCC
Confidence 999988643
No 201
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.96 E-value=2.3e-09 Score=94.00 Aligned_cols=80 Identities=25% Similarity=0.298 Sum_probs=64.9
Q ss_pred CeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh--CCC
Q psy6405 50 EVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK--RGP 127 (548)
Q Consensus 50 d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk--~g~ 127 (548)
.+++|.+.|. ..+|||++.+. .+++|..|.++|||+++| |++||+|++|||+++.+|+..+++..++ .+.
T Consensus 23 ~~r~v~l~k~--~~~~G~~l~~~-----~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~ 94 (109)
T 2vsv_A 23 MPRSIRFTAE--EGDLGFTLRGN-----APVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFGED 94 (109)
T ss_dssp SCEEEEECCG--GGCCCEEEESS-----SSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTS
T ss_pred CCEEEEEEeC--CCceeEEEeCC-----CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 4688999886 58999999743 368999999999999999 9999999999999999887777655554 233
Q ss_pred CeEEEEEecC
Q psy6405 128 PVEITLIKDG 137 (548)
Q Consensus 128 ~VtVtV~RdG 137 (548)
++.++|.|..
T Consensus 95 ~v~l~V~~~~ 104 (109)
T 2vsv_A 95 EIEMKVVSLL 104 (109)
T ss_dssp CEEEEEESCC
T ss_pred eEEEEEEECC
Confidence 4888887743
No 202
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.96 E-value=3.4e-09 Score=92.89 Aligned_cols=85 Identities=26% Similarity=0.343 Sum_probs=72.8
Q ss_pred CCCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 125 RGPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 125 ~g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
...+..|.+.|...++||++.+. .+++|..|.++|||+++| |+.||+|++|||.++.++++.++.++++...
T Consensus 21 ~~~~r~v~l~k~~~~~G~~l~~~-------~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~ 92 (109)
T 2vsv_A 21 QSMPRSIRFTAEEGDLGFTLRGN-------APVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFG 92 (109)
T ss_dssp HHSCEEEEECCGGGCCCEEEESS-------SSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTT
T ss_pred cCCCEEEEEEeCCCceeEEEeCC-------CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 34667899999888999999643 258899999999999999 9999999999999999999999999999876
Q ss_pred CCceeEEEEeccc
Q psy6405 205 DGTIQDIKALGYD 217 (548)
Q Consensus 205 g~~V~LlV~RilD 217 (548)
+.++.+.+.|..+
T Consensus 93 ~~~v~l~V~~~~~ 105 (109)
T 2vsv_A 93 EDEIEMKVVSLLD 105 (109)
T ss_dssp TSCEEEEEESCC-
T ss_pred CCeEEEEEEECCC
Confidence 6668888877654
No 203
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.96 E-value=1.4e-09 Score=94.61 Aligned_cols=92 Identities=32% Similarity=0.440 Sum_probs=76.5
Q ss_pred CCCCeEEEEEec-CcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcC-CCCHHHHHHHHHH
Q psy6405 125 RGPPVEITLIKD-GAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVT-EMSRIEAWSLLKK 202 (548)
Q Consensus 125 ~g~~VtVtV~Rd-GkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~-~~t~~EavelLrs 202 (548)
......|++.|. +.++||++.++.....+..+++|..|.++|||+++|+|++||+|++|||.++. ++++.+++.+++.
T Consensus 18 ~~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~ 97 (117)
T 2o2t_A 18 GRHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQK 97 (117)
T ss_dssp TSCEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHH
T ss_pred CCeEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc
Confidence 356678888886 57899999876543222347999999999999999999999999999999998 9999999999988
Q ss_pred cCCCceeEEEEeccc
Q psy6405 203 LNDGTIQDIKALGYD 217 (548)
Q Consensus 203 ~~g~~V~LlV~RilD 217 (548)
. +..+.+++.|...
T Consensus 98 ~-~~~v~l~v~R~~~ 111 (117)
T 2o2t_A 98 A-KDTVQLVIARGSL 111 (117)
T ss_dssp C-CSEEEEEEESSCC
T ss_pred C-CCEEEEEEEeCCc
Confidence 5 7788999988654
No 204
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.96 E-value=1.6e-09 Score=114.11 Aligned_cols=125 Identities=25% Similarity=0.439 Sum_probs=91.9
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh---C
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK---R 125 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk---~ 125 (548)
.+++.+.+.+. .+|||++.++.+ .+++|..|.+||||+++| |++||+|++|||.++.++++.+++..+. +
T Consensus 8 ~~~~~v~~~k~---~~lG~~i~gg~~---~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~ 80 (391)
T 3tsz_A 8 PSMKLVKFRKG---DSVGLRLAGGND---VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPK 80 (391)
T ss_dssp -CEEEEEEECC---SSCCEEEEEETT---TEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCT
T ss_pred CCcEEEEeecC---CceeEEEEecCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhcC
Confidence 45777888776 479999998764 689999999999999999 9999999999999999988888776654 6
Q ss_pred CCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcC-CCCCCCEEEEECC
Q psy6405 126 GPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNG-QLKAGDEILTINN 185 (548)
Q Consensus 126 g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaG-rLq~GDrILaVNG 185 (548)
|..+.++|.|++..+.-.+..... ..++|.....-.+....+ .++.||.+.-+|-
T Consensus 81 g~~v~l~v~r~~~~~~~~~~~~~~-----~~~~vral~dy~~~~~~~Lsf~~Gdil~V~~~ 136 (391)
T 3tsz_A 81 GEEVTILAQKKKDVYRRIVESDVG-----DSFYIRTHFEYEKESPYGLSFNKGEVFRVVDT 136 (391)
T ss_dssp TSEEEEEEEECHHHHGGGTSSCCS-----CCEEEEECSCBCCSSTTBCCBCTTCEEEEEES
T ss_pred CCeEEEEEeeCCcccccccccccc-----cccccccccccCCCCCCcceEccCCEEEEEec
Confidence 788999999977543211211111 247777665544433322 3688998766654
No 205
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.96 E-value=8.2e-09 Score=88.29 Aligned_cols=90 Identities=23% Similarity=0.407 Sum_probs=73.8
Q ss_pred CCCeEEEEEecCcceeEEEecCCCCCC------C---CCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHH
Q psy6405 126 GPPVEITLIKDGAGLGFSLEGGKDSPF------G---DQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEA 196 (548)
Q Consensus 126 g~~VtVtV~RdGkgLGfSItgg~~s~l------G---~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~Ea 196 (548)
+.+..|++.|...++||++.++..... + ...++|..|.++|||+++| |+.||+|++|||.++.++++.++
T Consensus 5 ~~~r~v~l~k~~~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~ 83 (107)
T 3qe1_A 5 GSPRVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQV 83 (107)
T ss_dssp -CCEEEEEECBTTBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred CCcEEEEEEECCCCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 567889999988899999987643210 0 1134699999999999999 99999999999999999999999
Q ss_pred HHHHHHcCCCceeEEEEeccc
Q psy6405 197 WSLLKKLNDGTIQDIKALGYD 217 (548)
Q Consensus 197 velLrs~~g~~V~LlV~RilD 217 (548)
.++++.. +..+.+++.|...
T Consensus 84 ~~~l~~~-g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 84 VDLIRAG-EKELILTVLSVES 103 (107)
T ss_dssp HHHHHHC-SSEEEEEEECSSC
T ss_pred HHHHHcC-CCEEEEEEEcCCC
Confidence 9999975 6788888887543
No 206
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.96 E-value=4.3e-09 Score=87.78 Aligned_cols=81 Identities=25% Similarity=0.340 Sum_probs=69.7
Q ss_pred CeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCc
Q psy6405 128 PVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGT 207 (548)
Q Consensus 128 ~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~ 207 (548)
..+|++.|...++||.+... .+++|..|.++|||+++| |+.||+|++|||.++.++++.++.++++.. +..
T Consensus 4 ~r~v~l~~~~~g~G~~l~~~-------~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~ 74 (91)
T 2f5y_A 4 YRQITIPRGKDGFGFTICCD-------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSC-PSE 74 (91)
T ss_dssp EEEEEEECBTTBTSEEEECS-------SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC-SSE
T ss_pred eEEEEEEeCCCCccEEEecC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCe
Confidence 35788888888899999754 258999999999999999 999999999999999999999999999875 457
Q ss_pred eeEEEEeccc
Q psy6405 208 IQDIKALGYD 217 (548)
Q Consensus 208 V~LlV~RilD 217 (548)
+.+++.|...
T Consensus 75 v~l~v~R~~~ 84 (91)
T 2f5y_A 75 IILLVWRMVP 84 (91)
T ss_dssp EEEEEEECC-
T ss_pred EEEEEEeCCC
Confidence 8888888643
No 207
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.96 E-value=2.5e-09 Score=88.82 Aligned_cols=85 Identities=31% Similarity=0.445 Sum_probs=71.8
Q ss_pred CCCeEEEEEe-cCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhc-CCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc
Q psy6405 126 GPPVEITLIK-DGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKN-GQLKAGDEILTINNVPVTEMSRIEAWSLLKKL 203 (548)
Q Consensus 126 g~~VtVtV~R-dGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAeka-GrLq~GDrILaVNGvsV~~~t~~EavelLrs~ 203 (548)
+.+.+|++.| .+.++||++.++.... .+++|..|.++|||+++ | |++||+|++|||.++.++++.+++.+++..
T Consensus 3 ~~~~~v~l~k~~~~~lG~~i~~~~~~~---~g~~V~~V~~~spA~~agg-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 78 (90)
T 1qav_A 3 LQRRRVTVRKADAGGLGISIKGGRENK---MPILISKIFKGLAADQTEA-LFVGDAILSVNGEDLSSATHDEAVQALKKT 78 (90)
T ss_dssp SSCEEEEEECCTTTCCCEEEEEEGGGT---EEEEEEEECTTSHHHHTTC-CCTTEEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred CccEEEEEEeCCCCCcCEEEEcccCCC---CCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4578899998 5678999998754321 36899999999999999 6 999999999999999999999999999886
Q ss_pred CCCceeEEEEec
Q psy6405 204 NDGTIQDIKALG 215 (548)
Q Consensus 204 ~g~~V~LlV~Ri 215 (548)
+..+.+.+.|.
T Consensus 79 -~~~v~l~v~r~ 89 (90)
T 1qav_A 79 -GKEVVLEVKYM 89 (90)
T ss_dssp -CSEEEEEEEEC
T ss_pred -CCeEEEEEEEe
Confidence 56788888763
No 208
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.95 E-value=1.8e-09 Score=94.52 Aligned_cols=90 Identities=30% Similarity=0.529 Sum_probs=74.5
Q ss_pred CeEEEEEecC-------cceeEEEecCCCCCC--CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHH
Q psy6405 128 PVEITLIKDG-------AGLGFSLEGGKDSPF--GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWS 198 (548)
Q Consensus 128 ~VtVtV~RdG-------kgLGfSItgg~~s~l--G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~Eave 198 (548)
...|++.|.. .++||+|.++...+. +..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.
T Consensus 13 ~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~ 92 (117)
T 1ujd_A 13 HARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQS 92 (117)
T ss_dssp EEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred eEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHH
Confidence 3567777765 689999987654321 2236899999999999999999999999999999999999999999
Q ss_pred HHHHcCCCceeEEEEecccc
Q psy6405 199 LLKKLNDGTIQDIKALGYDL 218 (548)
Q Consensus 199 lLrs~~g~~V~LlV~RilDL 218 (548)
+++.. +..+.+++.|....
T Consensus 93 ~l~~~-~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 93 IISQQ-SGEAEICVRLDLNM 111 (117)
T ss_dssp HHSCC-SSCEEEEEESSCCC
T ss_pred HHhcC-CCEEEEEEEECCcc
Confidence 99884 67899999887654
No 209
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.95 E-value=4.9e-09 Score=87.01 Aligned_cols=83 Identities=24% Similarity=0.334 Sum_probs=69.6
Q ss_pred CCeEEEEEecC--cceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 127 PPVEITLIKDG--AGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 127 ~~VtVtV~RdG--kgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
....|++.|.. .++||++..+... .+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+++..
T Consensus 6 ~~~~v~l~k~~~~~~~G~~~~~~~~~----~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~- 79 (91)
T 1m5z_A 6 ELHKVTLYKDSGMEDFGFSVADGLLE----KGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAES- 79 (91)
T ss_dssp EEEEEEEECCTTCSSSSEEEEECTTS----SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTS-
T ss_pred ceEEEEEEECCCCCCccEEEEeccCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 44678888754 4799999876533 369999999999999999 999999999999999999988888888865
Q ss_pred CCceeEEEEec
Q psy6405 205 DGTIQDIKALG 215 (548)
Q Consensus 205 g~~V~LlV~Ri 215 (548)
+..+.+.+.|.
T Consensus 80 g~~v~l~v~R~ 90 (91)
T 1m5z_A 80 GNKLDLVISRN 90 (91)
T ss_dssp TTEEEEEEEEC
T ss_pred CCEEEEEEEeC
Confidence 67788888774
No 210
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.95 E-value=3e-09 Score=89.63 Aligned_cols=84 Identities=24% Similarity=0.269 Sum_probs=71.4
Q ss_pred CCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
.+..+++.|...++||++...... .+++|..|.++|||+++| |++||+|++|||+++.++++.++.++++...+.
T Consensus 9 ~~~~~~l~~~~~g~G~~~~~~~~~----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 83 (98)
T 2jxo_A 9 RPRLCTMKKGPSGYGFNLHSDKSK----PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDE 83 (98)
T ss_dssp CCEEEEEECTTTCCCEEEECCCSS----SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred CcEEEEEEeCCCcccEEEEecCCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 346778888888999999876532 369999999999999999 999999999999999999999999999988555
Q ss_pred ceeEEEEec
Q psy6405 207 TIQDIKALG 215 (548)
Q Consensus 207 ~V~LlV~Ri 215 (548)
.+.+++.|.
T Consensus 84 ~~~l~v~R~ 92 (98)
T 2jxo_A 84 TKLLVVDRE 92 (98)
T ss_dssp EEEEECCHH
T ss_pred EEEEEEECC
Confidence 566777664
No 211
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.95 E-value=6.4e-09 Score=90.36 Aligned_cols=96 Identities=24% Similarity=0.410 Sum_probs=77.1
Q ss_pred CCeEEEEEec-CcceeEEEecCCCCC-CCC---CCeEEEEeccCChhhh-cCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy6405 127 PPVEITLIKD-GAGLGFSLEGGKDSP-FGD---QPLTVKKIFTGGCAEK-NGQLKAGDEILTINNVPVTEMSRIEAWSLL 200 (548)
Q Consensus 127 ~~VtVtV~Rd-GkgLGfSItgg~~s~-lG~---~gI~VssV~pgSpAek-aGrLq~GDrILaVNGvsV~~~t~~EavelL 200 (548)
.+..|++.|. ..++||+|.++.... .+. .+++|..|.++|||++ +| |++||+|++|||+++.++++.++.++|
T Consensus 10 ~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~~~l 88 (114)
T 1uew_A 10 QTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIVKLI 88 (114)
T ss_dssp CCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHHHHH
T ss_pred cceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3467888874 578999998764332 111 2679999999999999 88 999999999999999999999999999
Q ss_pred HHcCCCceeEEEEeccccCCCCCC
Q psy6405 201 KKLNDGTIQDIKALGYDLNSLGYP 224 (548)
Q Consensus 201 rs~~g~~V~LlV~RilDLr~~~~p 224 (548)
+. .+..+.+.+.|.........|
T Consensus 89 ~~-~g~~v~l~v~r~~~~~~~~~p 111 (114)
T 1uew_A 89 KD-AGLSVTLRIIPQEELNSPSGP 111 (114)
T ss_dssp HH-TTTEEEEEECCCSCCCCCCCS
T ss_pred Hc-CCCeEEEEEEeCCcCCCCCCC
Confidence 98 578899999887665544444
No 212
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.95 E-value=3.2e-09 Score=87.46 Aligned_cols=84 Identities=33% Similarity=0.592 Sum_probs=69.9
Q ss_pred CCCeEEEEEec-CcceeEEEecCCCCCCCCCCeEEEEeccCChhhh-cCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc
Q psy6405 126 GPPVEITLIKD-GAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEK-NGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL 203 (548)
Q Consensus 126 g~~VtVtV~Rd-GkgLGfSItgg~~s~lG~~gI~VssV~pgSpAek-aGrLq~GDrILaVNGvsV~~~t~~EavelLrs~ 203 (548)
|++..+++.|. +.++||++.++.... .+++|..|.++|||++ +| |++||+|++|||.++.++++.+++.+++..
T Consensus 1 g~~~~v~l~~~~~~~lG~~i~~~~~~~---~~~~V~~V~~gspA~~~ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 76 (87)
T 4e34_A 1 GPIRKVLLLKEDHEGLGISITGGKEHG---VPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQ 76 (87)
T ss_dssp CCCEEEEEECCTTBCCCEEEEEEGGGT---EEEEEEEECTTSHHHHHSC-CCTTEEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred CCEEEEEEEECCCCcccEEEEccCCCC---CCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 45678888885 468999998764331 2589999999999999 58 999999999999999999999999999876
Q ss_pred CCCceeEEEEe
Q psy6405 204 NDGTIQDIKAL 214 (548)
Q Consensus 204 ~g~~V~LlV~R 214 (548)
+..+.+++.+
T Consensus 77 -~~~v~l~v~~ 86 (87)
T 4e34_A 77 -RGEIEFEVVY 86 (87)
T ss_dssp -CSEEEEEEEE
T ss_pred -CCeEEEEEEE
Confidence 5577777764
No 213
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.95 E-value=2.5e-09 Score=95.94 Aligned_cols=80 Identities=24% Similarity=0.345 Sum_probs=68.8
Q ss_pred CcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc-CCCceeEEEEec
Q psy6405 137 GAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL-NDGTIQDIKALG 215 (548)
Q Consensus 137 GkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~-~g~~V~LlV~Ri 215 (548)
+.++||+|.++.....+..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++++|+.. .+..+.+++.|.
T Consensus 47 ~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 126 (131)
T 1wfg_A 47 GAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRS 126 (131)
T ss_dssp CTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEE
T ss_pred CCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcC
Confidence 5679999987554433334799999999999999999999999999999999999999999999987 467899999885
Q ss_pred c
Q psy6405 216 Y 216 (548)
Q Consensus 216 l 216 (548)
.
T Consensus 127 g 127 (131)
T 1wfg_A 127 G 127 (131)
T ss_dssp C
T ss_pred C
Confidence 3
No 214
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.94 E-value=5e-09 Score=89.20 Aligned_cols=90 Identities=26% Similarity=0.474 Sum_probs=75.4
Q ss_pred CCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 126 GPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 126 g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
...+.+++.|...++||++..+.... +..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.. +
T Consensus 10 ~~~~~v~l~~~~~g~G~~l~~~~~~~-~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g 87 (104)
T 2djt_A 10 SGHFSVELVRGYAGFGLTLGGGRDVA-GDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAG-G 87 (104)
T ss_dssp CCCEEEEEECCSSSCCEEEECCEETT-EECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHT-C
T ss_pred CceEEEEEEeCCCCccEEEEeccCCC-CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-C
Confidence 35578889998889999998754321 123699999999999999999999999999999999999999999999884 7
Q ss_pred CceeEEEEeccc
Q psy6405 206 GTIQDIKALGYD 217 (548)
Q Consensus 206 ~~V~LlV~RilD 217 (548)
..+.+++.|...
T Consensus 88 ~~v~l~v~R~g~ 99 (104)
T 2djt_A 88 PQLHLVIRRPLS 99 (104)
T ss_dssp SEEEEEECCCCC
T ss_pred CeEEEEEEECCC
Confidence 788888877644
No 215
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.94 E-value=7.7e-09 Score=86.65 Aligned_cols=88 Identities=25% Similarity=0.429 Sum_probs=73.2
Q ss_pred CeEEEEEecCcceeEEEecCCCCCC---CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 128 PVEITLIKDGAGLGFSLEGGKDSPF---GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 128 ~VtVtV~RdGkgLGfSItgg~~s~l---G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
.+.+.+.+...++||++.++..... ...+++|..|.++|||+++| |++||+|++|||.++.++++.+++..++. .
T Consensus 4 ~~~v~~~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~-~ 81 (97)
T 2w4f_A 4 ELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRG-A 81 (97)
T ss_dssp EEEEEEECBTTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHT-S
T ss_pred EEEEEEEeCCCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhC-C
Confidence 4677888888899999987654321 22479999999999999999 99999999999999999998887777776 4
Q ss_pred CCceeEEEEeccc
Q psy6405 205 DGTIQDIKALGYD 217 (548)
Q Consensus 205 g~~V~LlV~RilD 217 (548)
+..+.+.+.|...
T Consensus 82 g~~v~l~v~R~g~ 94 (97)
T 2w4f_A 82 GTAVQMRVWRERE 94 (97)
T ss_dssp CSEEEEEEECCSS
T ss_pred CCeEEEEEEeCCc
Confidence 7889999988643
No 216
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.94 E-value=3.9e-09 Score=91.59 Aligned_cols=91 Identities=30% Similarity=0.524 Sum_probs=77.2
Q ss_pred hCCCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc
Q psy6405 124 KRGPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL 203 (548)
Q Consensus 124 k~g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~ 203 (548)
.++..+.+++.+...++||++..+..... .+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..
T Consensus 14 ~~~~~~~v~l~~~~~glG~~l~~~~~~~~--~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 91 (116)
T 2dm8_A 14 VPGQEMIIEISKGRSGLGLSIVGGKDTPL--NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQT 91 (116)
T ss_dssp CTTSCEEEEEECCSSCCCCCCBCCTTSSC--SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTC
T ss_pred CCCCEEEEEEEECCCcccEEEeCCCCCCc--CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 34566888898888999999987654321 2699999999999999999999999999999999999999999999876
Q ss_pred CCCceeEEEEeccc
Q psy6405 204 NDGTIQDIKALGYD 217 (548)
Q Consensus 204 ~g~~V~LlV~RilD 217 (548)
. ..+.+.+.|...
T Consensus 92 ~-~~v~l~v~R~~~ 104 (116)
T 2dm8_A 92 P-QKVRLVVYRDEA 104 (116)
T ss_dssp C-SEEEEEEECCSS
T ss_pred C-CeEEEEEEeCCc
Confidence 4 788898888654
No 217
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.94 E-value=6.3e-09 Score=89.16 Aligned_cols=89 Identities=22% Similarity=0.407 Sum_probs=73.2
Q ss_pred CeEEEEE--ecCcceeEEEecCCCCCC--CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc
Q psy6405 128 PVEITLI--KDGAGLGFSLEGGKDSPF--GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL 203 (548)
Q Consensus 128 ~VtVtV~--RdGkgLGfSItgg~~s~l--G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~ 203 (548)
.+.+++. +...++||++.++..... ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++.
T Consensus 13 ~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~- 91 (108)
T 2jre_A 13 LYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRN- 91 (108)
T ss_dssp EEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHH-
T ss_pred EEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-
Confidence 4667774 466789999987654321 22479999999999999999999999999999999999999999999988
Q ss_pred CCCceeEEEEeccc
Q psy6405 204 NDGTIQDIKALGYD 217 (548)
Q Consensus 204 ~g~~V~LlV~RilD 217 (548)
.+..+.+.+.|...
T Consensus 92 ~g~~v~l~v~R~~~ 105 (108)
T 2jre_A 92 AGNPVRLLLIRRLP 105 (108)
T ss_dssp HCSEEEEEEEECCC
T ss_pred CCCeEEEEEEeCCc
Confidence 47788998887643
No 218
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.93 E-value=3.2e-09 Score=88.59 Aligned_cols=76 Identities=22% Similarity=0.443 Sum_probs=62.0
Q ss_pred EEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCCCeEE
Q psy6405 53 VVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGPPVEI 131 (548)
Q Consensus 53 tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~~VtV 131 (548)
.+.+.+.....+|||.+.+ +++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++ .+..+.+
T Consensus 3 ~v~l~~~~~~~~~G~~~~~-------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L 75 (88)
T 3e17_A 3 GVLLMKSRANEEYGLRLGS-------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQL 75 (88)
T ss_dssp EEEEECBTTBCCCCEEEEE-------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEE
T ss_pred EEEEEeCCCCCCCCEEEeC-------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 3556665456789999873 6999999999999999999999999999999999999888776554 3456667
Q ss_pred EEEe
Q psy6405 132 TLIK 135 (548)
Q Consensus 132 tV~R 135 (548)
++.+
T Consensus 76 ~v~~ 79 (88)
T 3e17_A 76 VVLR 79 (88)
T ss_dssp EECC
T ss_pred EEeC
Confidence 6665
No 219
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.93 E-value=3.6e-09 Score=93.90 Aligned_cols=83 Identities=24% Similarity=0.403 Sum_probs=68.6
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhC---
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKR--- 125 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~--- 125 (548)
.+.++|.|.|. ..||||+|.++. .+.+|..|.+ +++.+| |++||+|++|||++|.+++|.+++..++.
T Consensus 11 ~~~~~V~L~Kg--~~G~GFsI~~~~----~g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~ 81 (113)
T 3soe_A 11 GLLVTIPLIKG--PKGFGFAIADSP----TGQKVKMILD--SQWCQG-LQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPV 81 (113)
T ss_dssp CEEEEEEEECB--TTBSSEEEEEET----TEEEEEEESC--GGGSTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHSCT
T ss_pred CCEEEEEEEEC--CCcccEEEeCCC----CCcEEEEecC--hHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 56789999998 579999997543 2567889988 578888 99999999999999999999998777663
Q ss_pred CCCeEEEEEecCcce
Q psy6405 126 GPPVEITLIKDGAGL 140 (548)
Q Consensus 126 g~~VtVtV~RdGkgL 140 (548)
+..+.|+|.|.+...
T Consensus 82 G~~v~L~V~R~g~~~ 96 (113)
T 3soe_A 82 GADVPLLILRGGPPS 96 (113)
T ss_dssp TCEEEEEEEESSCC-
T ss_pred CCEEEEEEEECCccC
Confidence 668999999977543
No 220
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.93 E-value=5.8e-09 Score=98.35 Aligned_cols=93 Identities=18% Similarity=0.280 Sum_probs=79.8
Q ss_pred hhCCCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCC--CCHHHHHHHH
Q psy6405 123 LKRGPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTE--MSRIEAWSLL 200 (548)
Q Consensus 123 lk~g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~--~t~~EavelL 200 (548)
+.++..+.|++.|.+.++||+|.++.....+ .+++|..|.++|||+++|+|+.||+|++|||+++.+ +++.+++.++
T Consensus 14 ~~~~~~~~v~~~~~~~~lG~~i~~g~~~~~~-~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~ 92 (206)
T 3r0h_A 14 IKPNKKILIELKVEKKPMGVIVCGGKNNHVT-TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLF 92 (206)
T ss_dssp CCTTSCEEEEEECTTSCCCEEEECCSSSSCC-SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHH
T ss_pred CCCCCEEEEEEEeCCCCcCEEEecccCCCCC-CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHH
Confidence 4567789999999999999999987765432 479999999999999998899999999999999999 8999999999
Q ss_pred HHcCCCceeEEEEecc
Q psy6405 201 KKLNDGTIQDIKALGY 216 (548)
Q Consensus 201 rs~~g~~V~LlV~Ril 216 (548)
+...+..+.+++.|..
T Consensus 93 ~~~~~~~v~l~v~R~~ 108 (206)
T 3r0h_A 93 HTTYEKAVTLTVFRAD 108 (206)
T ss_dssp HSCCSSEEEEEEECCS
T ss_pred HhcCCCceEEEEEecc
Confidence 8875444888888754
No 221
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.93 E-value=4.2e-09 Score=92.99 Aligned_cols=90 Identities=32% Similarity=0.398 Sum_probs=77.3
Q ss_pred CCCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 125 RGPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 125 ~g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
++..+.|.+.|...++||++.++.... ..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..
T Consensus 23 ~~~~~~v~l~k~~~glG~~l~~~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~- 99 (124)
T 2daz_A 23 PGELHIIELEKDKNGLGLSLAGNKDRS--RMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTA- 99 (124)
T ss_dssp SSEEEEEEEECCSSCCCEEEECBSSTT--SCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHS-
T ss_pred CCceEEEEEEeCCCccCEEEeccCCCC--cCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 455678889999899999998765432 23799999999999999999999999999999999999999999999887
Q ss_pred CCceeEEEEeccc
Q psy6405 205 DGTIQDIKALGYD 217 (548)
Q Consensus 205 g~~V~LlV~RilD 217 (548)
+..+.+++.|...
T Consensus 100 ~~~v~l~v~R~~~ 112 (124)
T 2daz_A 100 PSKVKLVFIRNED 112 (124)
T ss_dssp CSEEEEEEEECTT
T ss_pred CCeEEEEEEeCCC
Confidence 4588999988754
No 222
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.93 E-value=4.1e-09 Score=98.70 Aligned_cols=82 Identities=28% Similarity=0.496 Sum_probs=67.5
Q ss_pred CceEEEEEeCCCC-------CCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCCCeEEEEE
Q psy6405 63 NSVGITLAGGSDY-------ESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGPPVEITLI 134 (548)
Q Consensus 63 ~GLGfsIagG~d~-------~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~~VtVtV~ 134 (548)
.+|||++.+|.+. ...+++|..|.++|||++ | |++||+|++|||+++.++++.+++..++ .+..+.|+|.
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~ 79 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIV 79 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 5899999998641 246899999999999999 9 9999999999999999999888765554 4568999999
Q ss_pred e---cCcceeEEEec
Q psy6405 135 K---DGAGLGFSLEG 146 (548)
Q Consensus 135 R---dGkgLGfSItg 146 (548)
| ++....+.+..
T Consensus 80 r~~~~G~~~~~~v~~ 94 (195)
T 2qbw_A 80 REVGNGAKQEIRVRV 94 (195)
T ss_dssp EECSSSCEEEEEEEE
T ss_pred EcCCCCCCceeEeEe
Confidence 9 66665555543
No 223
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.93 E-value=1.8e-09 Score=116.48 Aligned_cols=123 Identities=25% Similarity=0.444 Sum_probs=90.1
Q ss_pred eEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh---CCC
Q psy6405 51 VSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK---RGP 127 (548)
Q Consensus 51 ~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk---~g~ 127 (548)
++.|.+.+. .+|||++.++.+ .+++|..|.+||||+++| |++||+|++|||+++.++++.+++..++ ++.
T Consensus 2 ~r~V~l~k~---~~lG~~i~gg~~---~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~ 74 (468)
T 3shw_A 2 MKLVKFRKG---DSVGLRLAGGND---VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGE 74 (468)
T ss_dssp EEEEEEECC---SSCCEEEEEETT---TEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTS
T ss_pred ceEEEEecC---CccceEEEccCc---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCC
Confidence 577888875 789999998764 589999999999999999 9999999999999999998888765554 578
Q ss_pred CeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcC-CCCCCCEEEEECC
Q psy6405 128 PVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNG-QLKAGDEILTINN 185 (548)
Q Consensus 128 ~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaG-rLq~GDrILaVNG 185 (548)
.++|+|.|.+..+.-.+..+.. ..++|.......+....+ .++.||++.-+|-
T Consensus 75 ~v~L~V~r~g~~~~~~~~~~~g-----~s~yVralfdy~~~~~~~LsF~~GDIL~V~d~ 128 (468)
T 3shw_A 75 EVTILAQKKKDVYRRIVESDVG-----DSFYIRTHFEYEKESPYGLSFNKGEVFRVVDT 128 (468)
T ss_dssp EEEEEEEECHHHHHHHHHHTCC-----CCEEEEECSCBCCSSTTBCCBCTTCEEEEEES
T ss_pred EEEEEEEECCccchhhhccccc-----cccccccccCcCCCCCCCceEccCCEEEEeec
Confidence 8999999977544322222111 136666554433332222 2688887766653
No 224
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.93 E-value=5.3e-09 Score=91.28 Aligned_cols=89 Identities=24% Similarity=0.458 Sum_probs=74.1
Q ss_pred CeEEEEEecC-cceeEEEecCCCCCC---CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc
Q psy6405 128 PVEITLIKDG-AGLGFSLEGGKDSPF---GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL 203 (548)
Q Consensus 128 ~VtVtV~RdG-kgLGfSItgg~~s~l---G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~ 203 (548)
...|++.|.. .++||+|.++...+. +..+++|..|.++|||+ +| |++||+|++|||+++.++++.+++.+++..
T Consensus 15 ~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~l~~~ 92 (117)
T 2csj_A 15 QYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQLRKS 92 (117)
T ss_dssp EEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHHHHHS
T ss_pred EEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHHHhcC
Confidence 3667788775 899999998765432 23579999999999997 77 999999999999999999999999999985
Q ss_pred CCCceeEEEEeccccC
Q psy6405 204 NDGTIQDIKALGYDLN 219 (548)
Q Consensus 204 ~g~~V~LlV~RilDLr 219 (548)
+..+.+++.|.....
T Consensus 93 -~~~v~l~v~R~~~~~ 107 (117)
T 2csj_A 93 -GKIAAIVVKRPRKVQ 107 (117)
T ss_dssp -CSEEEEEEEEEEECC
T ss_pred -CCeEEEEEEECCccc
Confidence 778999998865543
No 225
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.93 E-value=1.3e-09 Score=109.59 Aligned_cols=87 Identities=29% Similarity=0.484 Sum_probs=74.4
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhh-cCCCCCCCEEEEECCeeccCccHHHHHHHhh-CC
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADR-DGRLQKGDRILSINGKSMKGLTHKESLAILK-RG 126 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaq-AGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g 126 (548)
.+++.|.|.|. +..+|||+|.++.+. ..+++|..|.++|||++ +| |++||+|++|||++|.++++.+++..++ .+
T Consensus 76 ~~~r~V~L~k~-~~~glGf~I~gg~d~-~~gi~V~~V~~gspA~~~aG-L~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g 152 (263)
T 1z87_A 76 LQRRRVTVRKA-DAGGLGISIKGGREN-KMPILISKIFKGLAADQTEA-LFVGDAILSVNGEDLSSATHDEAVQALKKTG 152 (263)
T ss_dssp CSSEEECCCTT-TTCCCCCEEEEETTT-TEEEEEEECCTTSHHHHCTT-CCSSCEEEEESSCBCTTSCHHHHHHHHHHCC
T ss_pred CccEEEEEEeC-CCCCEeEEEeeccCC-CCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCcCHHHHHHHHhcCC
Confidence 35799999987 378999999998754 35799999999999999 68 9999999999999999999998776554 46
Q ss_pred CCeEEEEEecCc
Q psy6405 127 PPVEITLIKDGA 138 (548)
Q Consensus 127 ~~VtVtV~RdGk 138 (548)
..+.|+|.|.+.
T Consensus 153 ~~V~L~V~R~~~ 164 (263)
T 1z87_A 153 KEVVLEVKYMKE 164 (263)
T ss_dssp SCCCEEEECCSS
T ss_pred CeEEEEEEeCcc
Confidence 789999998654
No 226
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.93 E-value=3.7e-10 Score=100.21 Aligned_cols=90 Identities=29% Similarity=0.451 Sum_probs=71.0
Q ss_pred CCCCCeEEEEEeeCCCCCceEEEEEeCCCC---------------------------CCCCeEEEEEcCCChhhhcCCCC
Q psy6405 46 PGTSEVSVVVLHRDLPGNSVGITLAGGSDY---------------------------ESKEITVHKVISGTPADRDGRLQ 98 (548)
Q Consensus 46 ~~~~d~~tV~L~Kd~~~~GLGfsIagG~d~---------------------------~~~gVvVs~V~pGSPAaqAGrLq 98 (548)
.....+++|.|.|. ..+|||++.+...+ ...+++|..|.++|||+++| |+
T Consensus 4 ~~~~~~r~v~l~r~--~~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~ 80 (126)
T 2yuy_A 4 GSSGGPKTVTLKRT--SQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LC 80 (126)
T ss_dssp SCSSSCCCEEEECC--SSSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CC
T ss_pred CCCCCCEEEEEEEC--CCCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CC
Confidence 34566788999987 47899999752110 12468999999999999999 99
Q ss_pred CCCEEEEECCeeccCccHHHHHHHhh-CCCCeEEEEEecCc
Q psy6405 99 KGDRILSINGKSMKGLTHKESLAILK-RGPPVEITLIKDGA 138 (548)
Q Consensus 99 ~GDrILaINGv~V~~~s~~~aV~~lk-~g~~VtVtV~RdGk 138 (548)
+||+|++|||++|.++++.+++..++ .+..+.|+|.|.+.
T Consensus 81 ~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 81 TGDRIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDS 121 (126)
T ss_dssp SSCCCCEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCCC
T ss_pred CCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCC
Confidence 99999999999999888888766554 36778888887654
No 227
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.92 E-value=4e-09 Score=86.32 Aligned_cols=81 Identities=30% Similarity=0.435 Sum_probs=67.2
Q ss_pred eEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCce
Q psy6405 129 VEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTI 208 (548)
Q Consensus 129 VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V 208 (548)
+.|++ +.+.++||++.++.... .+++|..|.++|||+++| |++||+|++|||.++.++++.++...++.. +..+
T Consensus 3 ~~v~l-~~~~~~G~~l~gg~~~~---~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v 76 (85)
T 1rgw_A 3 YSVTL-TGPGPWGFRLQGGKDFN---MPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSA-SYNL 76 (85)
T ss_dssp EEEEE-CCSSCCCEEECCCGGGT---SCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTC-SSCE
T ss_pred EEEEE-eCCCccCEEEEeccCCC---CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcC-CCeE
Confidence 45666 45578999998765432 368999999999999999 999999999999999999999999888776 4568
Q ss_pred eEEEEec
Q psy6405 209 QDIKALG 215 (548)
Q Consensus 209 ~LlV~Ri 215 (548)
.+.+.|.
T Consensus 77 ~l~v~R~ 83 (85)
T 1rgw_A 77 SLTLQKS 83 (85)
T ss_dssp EEEEESC
T ss_pred EEEEEeC
Confidence 8888764
No 228
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.92 E-value=6.3e-09 Score=93.49 Aligned_cols=89 Identities=20% Similarity=0.279 Sum_probs=73.4
Q ss_pred CCCeEEEEEec-CcceeEEEecCCCCC---------CCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHH
Q psy6405 126 GPPVEITLIKD-GAGLGFSLEGGKDSP---------FGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIE 195 (548)
Q Consensus 126 g~~VtVtV~Rd-GkgLGfSItgg~~s~---------lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~E 195 (548)
..+..+++.|. ..++||+|.++.... ....+++|..|.++|||+++| |+.||+|++|||+++.++++.+
T Consensus 26 ~~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~ 104 (132)
T 3l4f_D 26 IKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQ 104 (132)
T ss_dssp CCCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCHHH
T ss_pred CCCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 34578888884 478999998875421 111368999999999999999 9999999999999999999999
Q ss_pred HHHHHHHcCCCceeEEEEecc
Q psy6405 196 AWSLLKKLNDGTIQDIKALGY 216 (548)
Q Consensus 196 avelLrs~~g~~V~LlV~Ril 216 (548)
++.+++.. +..+.+++.+..
T Consensus 105 ~~~~l~~~-g~~v~l~v~~~~ 124 (132)
T 3l4f_D 105 VVNMIRQG-GNTLMVKVVMVT 124 (132)
T ss_dssp HHHHHHHT-TTEEEEEEECCC
T ss_pred HHHHHHcC-CCEEEEEEEECC
Confidence 99999985 678888887653
No 229
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.92 E-value=5.7e-09 Score=89.97 Aligned_cols=81 Identities=37% Similarity=0.583 Sum_probs=69.5
Q ss_pred ecCcceeEEEecCCCCCC--CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCceeEEE
Q psy6405 135 KDGAGLGFSLEGGKDSPF--GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTIQDIK 212 (548)
Q Consensus 135 RdGkgLGfSItgg~~s~l--G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V~LlV 212 (548)
.+..++||+|.++..... +..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++.. +..+.+++
T Consensus 10 ~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~v~l~v 88 (106)
T 4amh_A 10 RGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNT-SDFVYLKV 88 (106)
T ss_dssp --CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSC-CSEEEEEE
T ss_pred CCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCC-CCeEEEEE
Confidence 456789999998876543 334799999999999999999999999999999999999999999999886 56889999
Q ss_pred Eecc
Q psy6405 213 ALGY 216 (548)
Q Consensus 213 ~Ril 216 (548)
.|..
T Consensus 89 ~R~~ 92 (106)
T 4amh_A 89 AKPG 92 (106)
T ss_dssp ECCS
T ss_pred EeCC
Confidence 8864
No 230
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.92 E-value=8.6e-09 Score=86.43 Aligned_cols=81 Identities=30% Similarity=0.449 Sum_probs=70.3
Q ss_pred CCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 126 GPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 126 g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
+.+..|++.|+..++||++... .+++|..|.++|||+++| |+.||+|++|||+++.++++.++++.++ .+
T Consensus 7 ~~~r~v~l~~~~~~~G~~l~~~-------~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~--~g 76 (93)
T 2dls_A 7 GVQRCVIIQKDQHGFGFTVSGD-------RIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIK--SG 76 (93)
T ss_dssp CCEEEEEEECSSSSCCEEEECS-------SSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHT--SS
T ss_pred CCCEEEEEEeCCCceeEEEeCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhc--CC
Confidence 4557788899999999999753 258999999999999999 9999999999999999999888888776 37
Q ss_pred CceeEEEEecc
Q psy6405 206 GTIQDIKALGY 216 (548)
Q Consensus 206 ~~V~LlV~Ril 216 (548)
..+.+.+.|..
T Consensus 77 ~~v~l~v~R~~ 87 (93)
T 2dls_A 77 AYVALTLLGSS 87 (93)
T ss_dssp SEEEEEEECCC
T ss_pred CEEEEEEEECC
Confidence 88999998864
No 231
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.91 E-value=6e-09 Score=88.39 Aligned_cols=82 Identities=23% Similarity=0.428 Sum_probs=67.1
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh---
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK--- 124 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk--- 124 (548)
..+.+.+.+.+. ..+|||++.... .+++|..|.++ |+++| |++||+|++|||+++.++++.+++..++
T Consensus 8 ~~~~~~v~l~~~--~~g~G~~i~~~~----~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 78 (96)
T 1ujv_A 8 QAELMTLTIVKG--AQGFGFTIADSP----TGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILKDCP 78 (96)
T ss_dssp CCCCEEEEEECC--SSSSSEEEEEET----TEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred CceEEEEEEEeC--CCceeEEEEcCC----CCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 456788899887 689999997432 36899999983 78899 9999999999999999998888765554
Q ss_pred CCCCeEEEEEecCc
Q psy6405 125 RGPPVEITLIKDGA 138 (548)
Q Consensus 125 ~g~~VtVtV~RdGk 138 (548)
.+..+.++|.|++.
T Consensus 79 ~g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 79 IGSETSLIIHRGSG 92 (96)
T ss_dssp TTSEEEEEEECCSS
T ss_pred CCCEEEEEEEECCC
Confidence 37789999998765
No 232
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.91 E-value=4.1e-09 Score=87.33 Aligned_cols=80 Identities=23% Similarity=0.261 Sum_probs=59.3
Q ss_pred EEEEeeCC-CCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHH---HHHhhCCCC
Q psy6405 53 VVVLHRDL-PGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKES---LAILKRGPP 128 (548)
Q Consensus 53 tV~L~Kd~-~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~a---V~~lk~g~~ 128 (548)
.+.+.+.. ...+|||++... ..+++|..|.++|||+++| |++||+|++|||.++.+.+..+. +....++..
T Consensus 6 ~~~~~~~~~~~~~lG~~~~~~----~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~ 80 (90)
T 2eaq_A 6 RISINQTPGKSLDFGFTIKWD----IPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGH 80 (90)
T ss_dssp EEEEECCTTCSSCCSEEEEEE----TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTE
T ss_pred EEEEEecCCCCCcccEEEEec----CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCE
Confidence 44555442 234799998743 2479999999999999999 99999999999999944333333 233345788
Q ss_pred eEEEEEecC
Q psy6405 129 VEITLIKDG 137 (548)
Q Consensus 129 VtVtV~RdG 137 (548)
+.++|.|++
T Consensus 81 v~l~v~R~g 89 (90)
T 2eaq_A 81 LVMDVRRYG 89 (90)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEeCC
Confidence 999999875
No 233
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.91 E-value=6.4e-09 Score=90.62 Aligned_cols=91 Identities=25% Similarity=0.376 Sum_probs=76.3
Q ss_pred CCCeEEEEEec-CcceeEEEecCCCCCC------CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHH
Q psy6405 126 GPPVEITLIKD-GAGLGFSLEGGKDSPF------GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWS 198 (548)
Q Consensus 126 g~~VtVtV~Rd-GkgLGfSItgg~~s~l------G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~Eave 198 (548)
..+..|++.|. +.++||+|.++..... ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.
T Consensus 14 ~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~ 93 (117)
T 2ehr_A 14 GPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVE 93 (117)
T ss_dssp CCCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHH
T ss_pred CCCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 45678888886 4889999988764321 1247999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCceeEEEEeccc
Q psy6405 199 LLKKLNDGTIQDIKALGYD 217 (548)
Q Consensus 199 lLrs~~g~~V~LlV~RilD 217 (548)
+++.. +..+.+++.|..+
T Consensus 94 ~~~~~-g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 94 AIKNA-GNPVVFIVQSLSS 111 (117)
T ss_dssp HHHTS-CSSEEEEECCBSC
T ss_pred HHHcC-CCeEEEEEEECCC
Confidence 99885 7788888877644
No 234
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.91 E-value=4.6e-09 Score=86.79 Aligned_cols=83 Identities=19% Similarity=0.324 Sum_probs=67.7
Q ss_pred CCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHH-cCC
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKK-LND 205 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs-~~g 205 (548)
..++|++.|...++||++...... .+++|..+ ++|||+ +| |++||+|++|||.++.++++.++.++++. ..+
T Consensus 3 ~~~~v~l~k~~~g~G~~~~~~~~~----~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g 75 (88)
T 3bpu_A 3 ELITVHIVKGPMGFGFTIADSPGG----GGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVESPKG 75 (88)
T ss_dssp EEEEEEEECBTTBSSCEEEECTTS----SSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHTSCTT
T ss_pred cEEEEEEEcCCCceeEEEEecCCC----CcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCC
Confidence 346788899889999999865432 25888887 899999 88 99999999999999999999999999985 356
Q ss_pred CceeEEEEecc
Q psy6405 206 GTIQDIKALGY 216 (548)
Q Consensus 206 ~~V~LlV~Ril 216 (548)
..+.+.+.|..
T Consensus 76 ~~v~l~v~R~g 86 (88)
T 3bpu_A 76 SEVTLLVQRQT 86 (88)
T ss_dssp CEEEEEEEEEC
T ss_pred CEEEEEEEeCC
Confidence 78899888764
No 235
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.91 E-value=1.3e-08 Score=87.06 Aligned_cols=84 Identities=30% Similarity=0.428 Sum_probs=72.3
Q ss_pred CCCeEEEEEecC-cceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 126 GPPVEITLIKDG-AGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 126 g~~VtVtV~RdG-kgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
..+..|++.|.. ..+||++..+.... .+++|..|.++|||+++| |++||+|++|||+++.++++.+++++++.
T Consensus 14 ~~~~~v~l~k~~~~~lG~~~~~~~~~~---~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~-- 87 (104)
T 1wi2_A 14 FLPRIVTLKKPPGAQLGFNIRGGKASQ---LGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT-- 87 (104)
T ss_dssp SCCEEEEECCCTTCCCSEEEECCSSSC---CCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH--
T ss_pred CCCEEEEEEeCCCCCccEEEEcccCCC---CCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC--
Confidence 346788888865 78999998765432 369999999999999999 99999999999999999999999999998
Q ss_pred CCceeEEEEec
Q psy6405 205 DGTIQDIKALG 215 (548)
Q Consensus 205 g~~V~LlV~Ri 215 (548)
+..+.+.+.|.
T Consensus 88 ~~~v~l~v~r~ 98 (104)
T 1wi2_A 88 AREISMRVRFF 98 (104)
T ss_dssp SSSEEEEEECC
T ss_pred CCEEEEEEEEC
Confidence 57888888775
No 236
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.91 E-value=7.5e-09 Score=87.15 Aligned_cols=87 Identities=20% Similarity=0.257 Sum_probs=69.6
Q ss_pred CCCeEEEEEecC-cceeEEEec-CCC---CCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy6405 126 GPPVEITLIKDG-AGLGFSLEG-GKD---SPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLL 200 (548)
Q Consensus 126 g~~VtVtV~RdG-kgLGfSItg-g~~---s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelL 200 (548)
..+..|++.|.. .++||+|.+ +.. ..-...+++|..|.++|||+++| |++||+|++|||.++.++++.++.+++
T Consensus 3 ~~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l 81 (96)
T 2ego_A 3 QQRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDII 81 (96)
T ss_dssp CCEEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CccEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 355788888876 689999986 111 00001368999999999999999 999999999999999999999999999
Q ss_pred HHcCCCceeEEEEe
Q psy6405 201 KKLNDGTIQDIKAL 214 (548)
Q Consensus 201 rs~~g~~V~LlV~R 214 (548)
+.. +..+.+.+.+
T Consensus 82 ~~~-~~~v~l~v~~ 94 (96)
T 2ego_A 82 KAS-GNVLRLETLY 94 (96)
T ss_dssp HHT-TTEEEEEEEC
T ss_pred HhC-CCeEEEEEEE
Confidence 987 4578887765
No 237
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.91 E-value=3.2e-09 Score=95.58 Aligned_cols=83 Identities=23% Similarity=0.356 Sum_probs=69.4
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh---
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK--- 124 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk--- 124 (548)
....+.+.+.+. +.+|||++.+. ..+++|..|.++|||+++|+|++||+|++|||.+|.++++.+++..++
T Consensus 25 ~~~~~~~~l~k~--~~glG~~i~~~----~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~ 98 (126)
T 1wif_A 25 LNKVIQTKLTVG--NLGLGLVVIQN----GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNIT 98 (126)
T ss_dssp CCCEEEEEEECC--TTCCCCCEEEE----TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCC
T ss_pred CCceEEEEEecC--CceEeEEEEcC----CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Confidence 456778888887 78999998853 247899999999999999999999999999999998777777665554
Q ss_pred CCCCeEEEEEec
Q psy6405 125 RGPPVEITLIKD 136 (548)
Q Consensus 125 ~g~~VtVtV~Rd 136 (548)
++..+.|+|.|+
T Consensus 99 ~G~~v~l~V~R~ 110 (126)
T 1wif_A 99 IGTVLQIKAYRG 110 (126)
T ss_dssp SSCEEEEEEESS
T ss_pred CCCEEEEEEEEC
Confidence 477899999986
No 238
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.91 E-value=1.4e-08 Score=88.72 Aligned_cols=88 Identities=31% Similarity=0.528 Sum_probs=72.3
Q ss_pred eEEEEEe-cCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCc
Q psy6405 129 VEITLIK-DGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGT 207 (548)
Q Consensus 129 VtVtV~R-dGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~ 207 (548)
..+.+.| ...++||+|.++.... ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..++..
T Consensus 17 ~~v~l~~~~~~~lG~~i~g~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~~ 94 (119)
T 1x6d_A 17 HVTILHKEEGAGLGFSLAGGADLE--NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPR 94 (119)
T ss_dssp EEEEEECCTTSCCSEEEECCSSSS--CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSSS
T ss_pred EEEEEEeCCCCccCEEEeCCCCCC--CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCe
Confidence 4455555 4678999998765431 236999999999999999999999999999999999999999999999886666
Q ss_pred eeEEEEecccc
Q psy6405 208 IQDIKALGYDL 218 (548)
Q Consensus 208 V~LlV~RilDL 218 (548)
+.+++.|....
T Consensus 95 ~~l~v~R~~~~ 105 (119)
T 1x6d_A 95 QAVIVTRKLTP 105 (119)
T ss_dssp EEEEEEECCCS
T ss_pred EEEEEEcCCCc
Confidence 66777776543
No 239
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.90 E-value=1.5e-09 Score=88.74 Aligned_cols=79 Identities=30% Similarity=0.521 Sum_probs=68.3
Q ss_pred CeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCc
Q psy6405 128 PVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGT 207 (548)
Q Consensus 128 ~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~ 207 (548)
+..|++.|...++||++.... +++|..|.++|||+++| |+.||+|++|||.++.++++.++.++++.. +..
T Consensus 3 ~r~v~l~~~~~g~G~~~~~~~-------~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~ 73 (83)
T 2kv8_A 3 VRSVEVARGRAGYGFTLSGQA-------PCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKC-SGV 73 (83)
T ss_dssp EEEEEECCCSSCCSCBCCCSS-------SCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTC-SSC
T ss_pred cEEEEEEeCCCcccEEEEcCC-------CeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCe
Confidence 467888898888999886532 58899999999999999 999999999999999999999999999776 456
Q ss_pred eeEEEEec
Q psy6405 208 IQDIKALG 215 (548)
Q Consensus 208 V~LlV~Ri 215 (548)
+.+++.|.
T Consensus 74 v~l~v~R~ 81 (83)
T 2kv8_A 74 LHMVIAEG 81 (83)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 88888774
No 240
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.90 E-value=5.1e-09 Score=89.30 Aligned_cols=90 Identities=28% Similarity=0.469 Sum_probs=74.8
Q ss_pred CCCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 125 RGPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 125 ~g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
.+..++|++. .+.++||++.++.... .+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..
T Consensus 3 ~g~~~~v~l~-~~~~~G~~l~gg~~~~---~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~- 76 (103)
T 1wf7_A 3 SGSSGSVSLV-GPAPWGFRLQGGKDFN---MPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKAC- 76 (103)
T ss_dssp CCCCEEEEEE-SSSCCSCCEEEETTTT---EEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHC-
T ss_pred CCCEEEEEEe-CCCccCEEEeccccCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 4667788877 5678999998765432 258999999999999999 999999999999999999999999888876
Q ss_pred CCceeEEEEeccccCC
Q psy6405 205 DGTIQDIKALGYDLNS 220 (548)
Q Consensus 205 g~~V~LlV~RilDLr~ 220 (548)
+..+.+.+.|......
T Consensus 77 g~~v~l~v~R~g~~~~ 92 (103)
T 1wf7_A 77 TGSLNMTLQRASAAAK 92 (103)
T ss_dssp SSEEEEEECCCSCCCC
T ss_pred CCeEEEEEEeCCCcCC
Confidence 6788999988765443
No 241
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.90 E-value=1e-08 Score=89.79 Aligned_cols=91 Identities=22% Similarity=0.307 Sum_probs=75.8
Q ss_pred CCCeEEEEEecC-cceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 126 GPPVEITLIKDG-AGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 126 g~~VtVtV~RdG-kgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
..++.|.+.|.. .++||++..+.... ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++++|+. .
T Consensus 14 ~~~~~v~l~k~~~~~lG~~i~~~~~~~--~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~-~ 90 (117)
T 1v62_A 14 SGPLMVEIVKTPGSALGISLTTTSLRN--KSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLAS-I 90 (117)
T ss_dssp SSSEEEEEECCTTCCCCCEEEEECCSS--SCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHS-C
T ss_pred CCcEEEEEEcCCCCcccEEEEccCCCC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-C
Confidence 356788888865 78999998764321 1249999999999999999999999999999999999999999999996 4
Q ss_pred CCceeEEEEeccccC
Q psy6405 205 DGTIQDIKALGYDLN 219 (548)
Q Consensus 205 g~~V~LlV~RilDLr 219 (548)
+..+.+.+.|.....
T Consensus 91 g~~v~l~v~r~~~~~ 105 (117)
T 1v62_A 91 SEKVRLEILPVPQSQ 105 (117)
T ss_dssp SSEEEEEECCBTTBC
T ss_pred CCeEEEEEEECCCCC
Confidence 788999998876543
No 242
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.90 E-value=1.1e-08 Score=94.94 Aligned_cols=88 Identities=35% Similarity=0.556 Sum_probs=76.4
Q ss_pred CeEEEEEecCcceeEEEecCCCCCC--CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 128 PVEITLIKDGAGLGFSLEGGKDSPF--GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 128 ~VtVtV~RdGkgLGfSItgg~~s~l--G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
...|++.|++.++||+|.++...+. +..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.. +
T Consensus 6 ~~~v~l~~~~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g 84 (196)
T 3gsl_A 6 YEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEA-G 84 (196)
T ss_dssp EEEEEEECBTTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTS-C
T ss_pred EEEEEEEECCCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-C
Confidence 3678899999999999998876532 235799999999999999999999999999999999999999998888876 6
Q ss_pred CceeEEEEecc
Q psy6405 206 GTIQDIKALGY 216 (548)
Q Consensus 206 ~~V~LlV~Ril 216 (548)
..+.+++.|..
T Consensus 85 ~~v~l~v~r~~ 95 (196)
T 3gsl_A 85 SIVRLYVMRRK 95 (196)
T ss_dssp SEEEEEEEEEC
T ss_pred CcEEEEEEecC
Confidence 78888888754
No 243
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.89 E-value=7.1e-10 Score=94.77 Aligned_cols=86 Identities=24% Similarity=0.416 Sum_probs=67.8
Q ss_pred CeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhC-CCC
Q psy6405 50 EVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKR-GPP 128 (548)
Q Consensus 50 d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~-g~~ 128 (548)
+.+++.+.. ..+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||+++.+++..++...+.. +..
T Consensus 5 ~~~~v~~~~---~~~lG~~l~~g~~~-~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 79 (103)
T 1v5l_A 5 SSGNVVLPG---PAPWGFRLSGGIDF-NQPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAASYQ 79 (103)
T ss_dssp CCBCCEEES---SSCCSBCCEEETTT-TEEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTCCSE
T ss_pred CEEEEEEcC---CCCcCEEEeccccC-CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 344555543 46999999987653 2478999999999999999 99999999999999999777666555543 678
Q ss_pred eEEEEEecCcce
Q psy6405 129 VEITLIKDGAGL 140 (548)
Q Consensus 129 VtVtV~RdGkgL 140 (548)
+.|+|.|++..+
T Consensus 80 v~l~v~R~g~~~ 91 (103)
T 1v5l_A 80 LCLKIDRAETRL 91 (103)
T ss_dssp EECEECCCTTTT
T ss_pred EEEEEEECCeEc
Confidence 899998877643
No 244
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.88 E-value=1.7e-09 Score=92.04 Aligned_cols=81 Identities=22% Similarity=0.345 Sum_probs=65.7
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCC
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGP 127 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~ 127 (548)
.+.+.+.+.+. ..+|||.+... .+++|..|.++|||+++| |++||+|++|||+++.++++.+++..++ .+.
T Consensus 14 ~~~~~v~l~~~--~~g~G~~~~~~-----~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 85 (100)
T 1whd_A 14 GEKLQITIRRG--KDGFGFTICCD-----SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPS 85 (100)
T ss_dssp CEEEEEEEECC--SSSSSCBCCCS-----SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHCSS
T ss_pred cceEEEEEECC--CCeeeEEEeCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 44567778776 67899988753 468999999999999999 9999999999999999988777665554 345
Q ss_pred CeEEEEEecC
Q psy6405 128 PVEITLIKDG 137 (548)
Q Consensus 128 ~VtVtV~RdG 137 (548)
.+.++|.|.+
T Consensus 86 ~v~l~v~R~~ 95 (100)
T 1whd_A 86 EIILLVWRVS 95 (100)
T ss_dssp EEEEEEEECC
T ss_pred eEEEEEEECC
Confidence 5888888864
No 245
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.88 E-value=1.6e-08 Score=87.04 Aligned_cols=89 Identities=25% Similarity=0.407 Sum_probs=74.2
Q ss_pred CCeEEEEEecCcceeEEEecCCCCC---CCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSP---FGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL 203 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~---lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~ 203 (548)
..+.+.+.+...++||+|.++.... ....+++|..|.++|||+++| |++||+|++|||+++.++++.+++..++.
T Consensus 15 ~~~~~~l~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~- 92 (110)
T 1x5q_A 15 EELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRG- 92 (110)
T ss_dssp EEEEEEEECSSSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHS-
T ss_pred ceEEEEEecCCCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHhhC-
Confidence 4467888888889999998765421 122479999999999999999 99999999999999999998888888877
Q ss_pred CCCceeEEEEeccc
Q psy6405 204 NDGTIQDIKALGYD 217 (548)
Q Consensus 204 ~g~~V~LlV~RilD 217 (548)
.+..+.+.+.|...
T Consensus 93 ~g~~v~l~v~R~g~ 106 (110)
T 1x5q_A 93 AGTAVQMRVWRESG 106 (110)
T ss_dssp CCSEEEEEEEECSS
T ss_pred CCCeEEEEEEECCc
Confidence 57889999988654
No 246
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.88 E-value=1.7e-08 Score=84.02 Aligned_cols=88 Identities=19% Similarity=0.320 Sum_probs=72.5
Q ss_pred CeEEEEEecCcceeEEEecCCCCCC-CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 128 PVEITLIKDGAGLGFSLEGGKDSPF-GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 128 ~VtVtV~RdGkgLGfSItgg~~s~l-G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
.+++++.+...++||++........ ...+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++. .+.
T Consensus 5 ~~~v~l~~~~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~ 83 (97)
T 2iwn_A 5 TFDVELTKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRH-TGQ 83 (97)
T ss_dssp EEEEEEECBTTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHT-CCS
T ss_pred EEEEEEecCCCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCC
Confidence 3567777888889999987643211 12479999999999999999999999999999999999999999988887 477
Q ss_pred ceeEEEEecc
Q psy6405 207 TIQDIKALGY 216 (548)
Q Consensus 207 ~V~LlV~Ril 216 (548)
.+.+.+.|..
T Consensus 84 ~v~l~v~r~g 93 (97)
T 2iwn_A 84 TVLLTLMRRG 93 (97)
T ss_dssp EEEEEEEEEE
T ss_pred eEEEEEEeCC
Confidence 8888887754
No 247
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.88 E-value=9.5e-09 Score=86.62 Aligned_cols=78 Identities=23% Similarity=0.434 Sum_probs=60.9
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCC
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGP 127 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~ 127 (548)
.+...+.+.+.....+|||.+.+ + +|..|.++|||+++| |++||+|++|||+++.++++.+++..++ .+.
T Consensus 10 ~~~~~~~i~~~~~~~~lG~~~~~-------G-~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~ 80 (90)
T 1y7n_A 10 GNVTTVLIRRPDLRYQLGFSVQN-------G-IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAVG 80 (90)
T ss_dssp SSCEEEEEEESSTTSCCCEEEET-------T-EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHCCE
T ss_pred CCcceEEEEeCCCccccCeEecC-------C-EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 34455666555557899999863 2 899999999999999 9999999999999998877777665553 466
Q ss_pred CeEEEEEe
Q psy6405 128 PVEITLIK 135 (548)
Q Consensus 128 ~VtVtV~R 135 (548)
.+.++|.+
T Consensus 81 ~v~l~v~p 88 (90)
T 1y7n_A 81 EIHMKTMP 88 (90)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEE
Confidence 67777764
No 248
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.88 E-value=1e-08 Score=87.52 Aligned_cols=84 Identities=31% Similarity=0.370 Sum_probs=71.1
Q ss_pred CeEEEEEecC-cceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 128 PVEITLIKDG-AGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 128 ~VtVtV~RdG-kgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
+..+++.|.. ..+||.+...... .+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++.. +.
T Consensus 2 ~r~v~l~~~~~~~~G~~l~~~~~~----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~ 75 (106)
T 3ngh_A 2 PRESKLSKQEGQNYGFFLRIEKDT----DGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKS-GN 75 (106)
T ss_dssp CEEEEEECCTTCCCCCEEECCTTC----CSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHT-TT
T ss_pred CEEEEEEeCCCCeeCEEEEEEeCC----CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC-CC
Confidence 4567777754 7789998876433 368999999999999999 999999999999999999999999999864 77
Q ss_pred ceeEEEEeccc
Q psy6405 207 TIQDIKALGYD 217 (548)
Q Consensus 207 ~V~LlV~RilD 217 (548)
.+.+.+.|...
T Consensus 76 ~v~l~v~r~~~ 86 (106)
T 3ngh_A 76 SVTLLVLDGDS 86 (106)
T ss_dssp EEEEEEECHHH
T ss_pred EEEEEEEECCe
Confidence 89999988654
No 249
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.88 E-value=8.3e-09 Score=87.67 Aligned_cols=85 Identities=21% Similarity=0.280 Sum_probs=73.5
Q ss_pred CCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 126 GPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 126 g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
..+..|++.|...++||++...... .+++|..|.++|||+++| |++||+|++|||.++.++++.++.++++.. +
T Consensus 5 ~~~r~v~l~k~~~g~G~~l~~~~~~----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g 78 (102)
T 2d90_A 5 SSGRVVVIKKGSNGYGFYLRAGPEQ----KGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKG-G 78 (102)
T ss_dssp SSSEEEEEECCSSSSSCEEEECSSS----SSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHS-T
T ss_pred CCCEEEEEeeCCCCccEEEEeecCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-C
Confidence 3567899999989999999875432 369999999999999999 999999999999999999989999999885 6
Q ss_pred CceeEEEEecc
Q psy6405 206 GTIQDIKALGY 216 (548)
Q Consensus 206 ~~V~LlV~Ril 216 (548)
..+.+.+.|..
T Consensus 79 ~~v~l~v~r~~ 89 (102)
T 2d90_A 79 DQTTLLVLDKE 89 (102)
T ss_dssp TEEEEEECSTT
T ss_pred CEEEEEEEECC
Confidence 78888887654
No 250
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.87 E-value=5.1e-09 Score=91.50 Aligned_cols=88 Identities=23% Similarity=0.338 Sum_probs=73.4
Q ss_pred CCCeEEEEEecCc-ceeEEEecCCCCCCCCCCeEEEEeccCChhhhc--CCCCCCCEEEEECCEEcCCCCHHHHHHHHHH
Q psy6405 126 GPPVEITLIKDGA-GLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKN--GQLKAGDEILTINNVPVTEMSRIEAWSLLKK 202 (548)
Q Consensus 126 g~~VtVtV~RdGk-gLGfSItgg~~s~lG~~gI~VssV~pgSpAeka--GrLq~GDrILaVNGvsV~~~t~~EavelLrs 202 (548)
+..+.|++.|... .+||++.++.... .+++|..|.++|||+++ | |++||+|++|||.++.++++.+++.+++.
T Consensus 14 ~~~~~v~l~k~~~~~~G~~l~gg~~~~---~~v~V~~V~~~spA~~a~gG-L~~GD~Il~ing~~v~~~~~~~~~~~~~~ 89 (119)
T 2cs5_A 14 DNLVLIRMKPDENGRFGFNVKGGYDQK---MPVIVSRVAPGTPADLCVPR-LNEGDQVVLINGRDIAEHTHDQVVLFIKA 89 (119)
T ss_dssp SCCEEEEECCCSSSCCSEEEEEEGGGT---EEEEEEEECSSSTTTSSSSC-CCTTCEEEEETTBCTTSSCHHHHHHHHHH
T ss_pred CCeEEEEEEeCCCCCcCEEEecccCCC---CCeEEEEECCCCHHHHhhcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4567888888654 4999998765331 25899999999999999 7 99999999999999999999999999988
Q ss_pred cCC---CceeEEEEeccc
Q psy6405 203 LND---GTIQDIKALGYD 217 (548)
Q Consensus 203 ~~g---~~V~LlV~RilD 217 (548)
..+ ..+.+++.|...
T Consensus 90 ~~~~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 90 SCERHSGELMLLVRPNAV 107 (119)
T ss_dssp HHHCCSSCEEEEEECCCC
T ss_pred ccccCCCEEEEEEEcccc
Confidence 743 578999988643
No 251
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.87 E-value=5.9e-09 Score=89.31 Aligned_cols=85 Identities=33% Similarity=0.564 Sum_probs=70.3
Q ss_pred CCCeEEEEEec-CcceeEEEecCCCCCCCCCCeEEEEeccCChhhhc-CCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc
Q psy6405 126 GPPVEITLIKD-GAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKN-GQLKAGDEILTINNVPVTEMSRIEAWSLLKKL 203 (548)
Q Consensus 126 g~~VtVtV~Rd-GkgLGfSItgg~~s~lG~~gI~VssV~pgSpAeka-GrLq~GDrILaVNGvsV~~~t~~EavelLrs~ 203 (548)
+....+++.|. +.++||++.++.... .+++|..|.++|||+++ | |++||+|++|||+++.++++.+++.+++..
T Consensus 8 ~~~~~v~l~~~~~~~lG~~l~~g~~~~---~~~~V~~V~~~s~A~~a~g-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 83 (103)
T 2dc2_A 8 GPIRKVLLLKEDHEGLGISITGGKEHG---VPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQ 83 (103)
T ss_dssp -CEEEEEEECCSSSCCCEEEEEEGGGT---EEEEEEEECTTSHHHHHTC-CCSSEEEEEETTEESTTSCHHHHHHHHHHC
T ss_pred CCcEEEEEEeCCCCccCEEEEeccCCC---CCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 44567777764 478999998765331 25899999999999996 7 999999999999999999999999999987
Q ss_pred CCCceeEEEEec
Q psy6405 204 NDGTIQDIKALG 215 (548)
Q Consensus 204 ~g~~V~LlV~Ri 215 (548)
+..+.+.+.+.
T Consensus 84 -~~~v~l~v~~~ 94 (103)
T 2dc2_A 84 -RGEIEFEVVYV 94 (103)
T ss_dssp -CSEEEEEEEEC
T ss_pred -CCcEEEEEEec
Confidence 45788887764
No 252
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.87 E-value=9.2e-09 Score=91.25 Aligned_cols=84 Identities=26% Similarity=0.362 Sum_probs=71.4
Q ss_pred CCCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 125 RGPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 125 ~g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
.+..++|++.|...++||+|..+.. +.+|..|.+ +++.+| |++||+|++|||+++.+++|.+++++|++.+
T Consensus 10 ~~~~~~V~L~Kg~~G~GFsI~~~~~------g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v~~~~h~evv~~lk~~~ 80 (113)
T 3soe_A 10 AGLLVTIPLIKGPKGFGFAIADSPT------GQKVKMILD--SQWCQG-LQKGDIIKEIYHQNVQNLTHLQVVEVLKQFP 80 (113)
T ss_dssp HCEEEEEEEECBTTBSSEEEEEETT------EEEEEEESC--GGGSTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHSC
T ss_pred CCCEEEEEEEECCCcccEEEeCCCC------CcEEEEecC--hHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4566899999999999999965432 366888877 477777 9999999999999999999999999999875
Q ss_pred -CCceeEEEEeccc
Q psy6405 205 -DGTIQDIKALGYD 217 (548)
Q Consensus 205 -g~~V~LlV~RilD 217 (548)
+..+.++|.|...
T Consensus 81 ~G~~v~L~V~R~g~ 94 (113)
T 3soe_A 81 VGADVPLLILRGGP 94 (113)
T ss_dssp TTCEEEEEEEESSC
T ss_pred CCCEEEEEEEECCc
Confidence 6789999999764
No 253
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.87 E-value=2e-08 Score=88.98 Aligned_cols=90 Identities=18% Similarity=0.354 Sum_probs=75.1
Q ss_pred CeEEEEEe-cCcceeEEEecCCCCCC--CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 128 PVEITLIK-DGAGLGFSLEGGKDSPF--GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 128 ~VtVtV~R-dGkgLGfSItgg~~s~l--G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
.+.|.+.| ...++||++.+...... ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++++++. .
T Consensus 16 ~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~-~ 94 (129)
T 2dmz_A 16 TYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRN-A 94 (129)
T ss_dssp EEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHH-C
T ss_pred EEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-C
Confidence 36677744 67789999987543322 22479999999999999999999999999999999999999999999998 6
Q ss_pred CCceeEEEEecccc
Q psy6405 205 DGTIQDIKALGYDL 218 (548)
Q Consensus 205 g~~V~LlV~RilDL 218 (548)
+..+.+.+.|....
T Consensus 95 ~~~v~l~v~R~~~~ 108 (129)
T 2dmz_A 95 GQVVHLTLVRRKTS 108 (129)
T ss_dssp CSSEEEEEEEESSS
T ss_pred CCeEEEEEEeCCcc
Confidence 88999999987653
No 254
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.86 E-value=1.5e-08 Score=89.41 Aligned_cols=84 Identities=25% Similarity=0.381 Sum_probs=71.1
Q ss_pred CeEEEEEec-CcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 128 PVEITLIKD-GAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 128 ~VtVtV~Rd-GkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
+..+++.|. ..++||++.++.... .+++|..|.++|||+++|+|+.||+|++|||.++.++++.+++.++++. +.
T Consensus 20 ~~~v~l~k~~~~~lG~~i~gg~~~~---~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~-~~ 95 (125)
T 3hpk_A 20 PGKVTLQKDAQNLIGISIGGGAQYC---PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV-KG 95 (125)
T ss_dssp EEEEEEECCTTSCCCEEEEECSSCC---SSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHS-CS
T ss_pred CeEEEEEeCCCCCcCEEEeccCCCC---CCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CC
Confidence 356677774 457999998876432 3689999999999999999999999999999999999999999999997 44
Q ss_pred ceeEEEEec
Q psy6405 207 TIQDIKALG 215 (548)
Q Consensus 207 ~V~LlV~Ri 215 (548)
.+.+.+.|.
T Consensus 96 ~v~l~v~r~ 104 (125)
T 3hpk_A 96 EVTIHYNKL 104 (125)
T ss_dssp EEEEEEEEE
T ss_pred eEEEEEEEC
Confidence 688888874
No 255
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.86 E-value=1.2e-08 Score=85.65 Aligned_cols=84 Identities=30% Similarity=0.415 Sum_probs=70.0
Q ss_pred CCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
.++.|++ +....+||++.++.... .+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++.. +.
T Consensus 8 ~~~~v~l-~~~~~~G~~l~gg~~~~---~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~ 81 (94)
T 2eeg_A 8 MPHSVTL-RGPSPWGFRLVGGRDFS---APLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGC-HD 81 (94)
T ss_dssp CCEEEEE-CCSSCCSCCEECCTTTT---SCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTC-CS
T ss_pred ceEEEEE-eCCCccCEEEECccCCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-CC
Confidence 4566777 45578999998866432 368999999999999999 999999999999999999988999888874 67
Q ss_pred ceeEEEEecc
Q psy6405 207 TIQDIKALGY 216 (548)
Q Consensus 207 ~V~LlV~Ril 216 (548)
.+.+.+.|..
T Consensus 82 ~v~l~v~R~g 91 (94)
T 2eeg_A 82 HLTLSVSSGP 91 (94)
T ss_dssp CEEEEEECCS
T ss_pred eEEEEEEeCC
Confidence 8888887753
No 256
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.86 E-value=9.5e-09 Score=87.73 Aligned_cols=86 Identities=24% Similarity=0.322 Sum_probs=73.3
Q ss_pred CCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 126 GPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 126 g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
..+..|++.|.+.++||++...... .+++|..|.++|||+++| |++||+|++|||.++.++++.++...++.. +
T Consensus 7 ~~~r~v~l~k~~~~~G~~l~~~~~~----~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~ 80 (106)
T 2eei_A 7 GQPRLCYLVKEGGSYGFSLKTVQGK----KGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKS-G 80 (106)
T ss_dssp SSSEEEEEECCSSSCSCCEECCSSC----CSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHH-C
T ss_pred CCCEEEEEEECCCCCCEEEEeccCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC-C
Confidence 4567889999888999999765432 368999999999999999 999999999999999999999999999876 5
Q ss_pred CceeEEEEeccc
Q psy6405 206 GTIQDIKALGYD 217 (548)
Q Consensus 206 ~~V~LlV~RilD 217 (548)
..+.+++.|...
T Consensus 81 ~~v~l~v~r~~~ 92 (106)
T 2eei_A 81 SRVMFLLVDKET 92 (106)
T ss_dssp SEEEEEECCTTT
T ss_pred CeEEEEEEcCch
Confidence 678888877543
No 257
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.86 E-value=8.1e-09 Score=88.34 Aligned_cols=86 Identities=23% Similarity=0.364 Sum_probs=71.3
Q ss_pred CCCeEEEEEecC-cceeEEEecCCCCCCCCCCeEEEEeccCChhhhcC-CCCCCCEEEEECCEEcCCCCHHHHHHHHHHc
Q psy6405 126 GPPVEITLIKDG-AGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNG-QLKAGDEILTINNVPVTEMSRIEAWSLLKKL 203 (548)
Q Consensus 126 g~~VtVtV~RdG-kgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaG-rLq~GDrILaVNGvsV~~~t~~EavelLrs~ 203 (548)
.....+.+.|.. .++||++.++.... .+++|..|.++|||+++| +|++||+|++|||.++.++++.+++.+++..
T Consensus 16 ~~~~~v~l~~~~~~~~G~~~~gg~~~~---~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~ 92 (107)
T 3nfk_A 16 DNLVLIRMKPDENGRFGFNVKGGYDQK---MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKAS 92 (107)
T ss_dssp CCCEEEEECCCTTSCCCEEEEEEGGGT---EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCG
T ss_pred CCEEEEEEEcCCCCCCCEEEEccCCCC---CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 445677777765 78999998754321 258999999999999999 6999999999999999999999999999887
Q ss_pred CC---CceeEEEEe
Q psy6405 204 ND---GTIQDIKAL 214 (548)
Q Consensus 204 ~g---~~V~LlV~R 214 (548)
.. ..+.+++.|
T Consensus 93 ~~~~~~~v~l~v~r 106 (107)
T 3nfk_A 93 CERHSGELMLLVRP 106 (107)
T ss_dssp GGSBTTBEEEEEEC
T ss_pred cccCCcEEEEEEEc
Confidence 42 478888876
No 258
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.85 E-value=1.4e-08 Score=86.22 Aligned_cols=75 Identities=31% Similarity=0.440 Sum_probs=63.6
Q ss_pred ceeEEEecCCCCC---------CCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCcee
Q psy6405 139 GLGFSLEGGKDSP---------FGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTIQ 209 (548)
Q Consensus 139 gLGfSItgg~~s~---------lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V~ 209 (548)
.+||++.++.... ....+++|..|.++|||+++| |++||+|++|||.++.++++.++.+.++...+..+.
T Consensus 20 ~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~ 98 (104)
T 3sfj_A 20 ILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVR 98 (104)
T ss_dssp ECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEEE
T ss_pred cccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEE
Confidence 5999998654421 123479999999999999999 999999999999999999999999999876677888
Q ss_pred EEEEe
Q psy6405 210 DIKAL 214 (548)
Q Consensus 210 LlV~R 214 (548)
+.+.|
T Consensus 99 l~v~R 103 (104)
T 3sfj_A 99 LLVTR 103 (104)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 88876
No 259
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.85 E-value=1.2e-08 Score=84.81 Aligned_cols=83 Identities=29% Similarity=0.370 Sum_probs=69.4
Q ss_pred eEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCce
Q psy6405 129 VEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTI 208 (548)
Q Consensus 129 VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V 208 (548)
+.+++. .+.++||++.++.... .+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++. .+..+
T Consensus 5 ~~v~~~-~~~~~G~~l~~~~~~~---~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v 78 (91)
T 2pkt_A 5 QQIDLQ-GPGPWGFRLVGGKDFE---QPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKG-CTDNL 78 (91)
T ss_dssp EEEEEE-SSSCCSEEEEEEGGGT---EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHT-CSSEE
T ss_pred EEEEEC-CCCCCCEEEEccCCCC---CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeE
Confidence 344444 4578999998764321 258999999999999999 99999999999999999999999999998 68889
Q ss_pred eEEEEeccc
Q psy6405 209 QDIKALGYD 217 (548)
Q Consensus 209 ~LlV~RilD 217 (548)
.+.+.|...
T Consensus 79 ~l~v~R~g~ 87 (91)
T 2pkt_A 79 TLTVARSEH 87 (91)
T ss_dssp EEEEEEECC
T ss_pred EEEEEECCc
Confidence 999988654
No 260
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.85 E-value=1.4e-08 Score=88.56 Aligned_cols=86 Identities=31% Similarity=0.516 Sum_probs=74.1
Q ss_pred CCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 126 GPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 126 g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
.....|++.|...++||++...... .+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++.. +
T Consensus 13 ~~~~~v~l~k~~~glG~~l~~~~~~----~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~ 87 (119)
T 1tp5_A 13 REPRRIVIHRGSTGLGFNIVGGEDG----EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNA-G 87 (119)
T ss_dssp CSCEEEEEECTTSCCCEEEEECGGG----CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTS-C
T ss_pred CccEEEEEEECCCCccEEEecCCCC----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-C
Confidence 4568899999888999999876532 3699999999999999999999999999999999999988888888775 6
Q ss_pred CceeEEEEecc
Q psy6405 206 GTIQDIKALGY 216 (548)
Q Consensus 206 ~~V~LlV~Ril 216 (548)
..+.+.+.|..
T Consensus 88 ~~v~l~v~r~~ 98 (119)
T 1tp5_A 88 QTVTIIAQYKP 98 (119)
T ss_dssp SEEEEEEEECH
T ss_pred CeEEEEEEECC
Confidence 78888888754
No 261
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.84 E-value=2.1e-08 Score=89.17 Aligned_cols=86 Identities=29% Similarity=0.465 Sum_probs=72.1
Q ss_pred CCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHH-cC
Q psy6405 126 GPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKK-LN 204 (548)
Q Consensus 126 g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs-~~ 204 (548)
...+.+...+.+..+||++..+... +++|..|.++|||+++| |++||+|++|||+++.++++.++.++++. ..
T Consensus 27 ~p~~~~~~~~~~~~lG~~l~~~~~~-----gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 100 (124)
T 3tsv_A 27 RPSMKLVKFRKGDSVGLRLAGGNDV-----GIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPK 100 (124)
T ss_dssp -CCCEEEEEECSSCCCEEEEECTTS-----CEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSCT
T ss_pred CCCeEEEEcCCCCceeEEEecCCCC-----CEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCC
Confidence 4556666667778999999875432 69999999999999999 99999999999999999999899998876 45
Q ss_pred CCceeEEEEeccc
Q psy6405 205 DGTIQDIKALGYD 217 (548)
Q Consensus 205 g~~V~LlV~RilD 217 (548)
+..+.+++.|..+
T Consensus 101 g~~v~l~v~R~~~ 113 (124)
T 3tsv_A 101 GEEVTILAQKKKD 113 (124)
T ss_dssp TCEEEEEEEECHH
T ss_pred CCEEEEEEEECCc
Confidence 7788999888654
No 262
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.84 E-value=1.3e-08 Score=87.29 Aligned_cols=81 Identities=31% Similarity=0.362 Sum_probs=68.2
Q ss_pred CeEEEEEe-cCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 128 PVEITLIK-DGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 128 ~VtVtV~R-dGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
+..+.+.| .+.++|+++..... .+++|..|.++|||+++|+|++||+|++|||.++.+++..++.++++.. +.
T Consensus 13 ~~~v~l~K~~~~~lG~~l~~~~~-----~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~-~~ 86 (97)
T 2ejy_A 13 VRLIQFEKVTEEPMGICLKLNEK-----QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKET-KG 86 (97)
T ss_dssp CEEEEEEECSSSCCSEEEEECTT-----CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHC-CE
T ss_pred cEEEEEEeCCCCCeeEEEEeCCC-----CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CC
Confidence 46777776 56789999986433 2699999999999999999999999999999999998888999999986 55
Q ss_pred ceeEEEEe
Q psy6405 207 TIQDIKAL 214 (548)
Q Consensus 207 ~V~LlV~R 214 (548)
.+.+.+.+
T Consensus 87 ~v~L~V~~ 94 (97)
T 2ejy_A 87 MISLKVIP 94 (97)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEE
Confidence 77777654
No 263
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.84 E-value=2.3e-08 Score=83.77 Aligned_cols=83 Identities=33% Similarity=0.499 Sum_probs=68.1
Q ss_pred eEEEEEecCcceeEEEecCCC---CCC--CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc
Q psy6405 129 VEITLIKDGAGLGFSLEGGKD---SPF--GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL 203 (548)
Q Consensus 129 VtVtV~RdGkgLGfSItgg~~---s~l--G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~ 203 (548)
++|++.|.. ++||+|.++.. .+. ...+++|..|.++|||++ | |++||+|++|||.++.++++.+++..++..
T Consensus 5 ~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (95)
T 1mfg_A 5 IRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTF 81 (95)
T ss_dssp EEEEEECSS-SCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHHHC
T ss_pred EEEEECCCC-CCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhhcC
Confidence 456666654 89999987653 111 234799999999999999 8 999999999999999999999999998865
Q ss_pred CCCceeEEEEec
Q psy6405 204 NDGTIQDIKALG 215 (548)
Q Consensus 204 ~g~~V~LlV~Ri 215 (548)
+..+.+.+.|.
T Consensus 82 -~~~v~l~v~R~ 92 (95)
T 1mfg_A 82 -QNTVELIIVRE 92 (95)
T ss_dssp -CSEEEEEEEEE
T ss_pred -CCeEEEEEEeC
Confidence 67888888875
No 264
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.84 E-value=3.3e-08 Score=84.49 Aligned_cols=88 Identities=24% Similarity=0.422 Sum_probs=71.4
Q ss_pred CeEEEEEec-CcceeEEEecCCCCCC---CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc
Q psy6405 128 PVEITLIKD-GAGLGFSLEGGKDSPF---GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL 203 (548)
Q Consensus 128 ~VtVtV~Rd-GkgLGfSItgg~~s~l---G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~ 203 (548)
...|++.|. +.++||++.++...+. +..+++|..|.++|||+ +| |++||+|++|||.++.++++.+++..++..
T Consensus 8 ~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 85 (107)
T 2h2b_A 8 QHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQQLRKS 85 (107)
T ss_dssp EEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred eEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHHHhhCC
Confidence 467888887 4789999987665321 23479999999999999 88 999999999999999999987777666643
Q ss_pred CCCceeEEEEecccc
Q psy6405 204 NDGTIQDIKALGYDL 218 (548)
Q Consensus 204 ~g~~V~LlV~RilDL 218 (548)
+..+.+.+.|....
T Consensus 86 -g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 86 -GKNAKITIRRKKGG 99 (107)
T ss_dssp -CSEEEEEEEEESCC
T ss_pred -CCEEEEEEEECCCC
Confidence 67889999887543
No 265
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.84 E-value=2.6e-08 Score=84.49 Aligned_cols=89 Identities=22% Similarity=0.349 Sum_probs=70.6
Q ss_pred CCeEEEEEecC-cceeEEEecCCCCCC------CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHH
Q psy6405 127 PPVEITLIKDG-AGLGFSLEGGKDSPF------GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSL 199 (548)
Q Consensus 127 ~~VtVtV~RdG-kgLGfSItgg~~s~l------G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~Eavel 199 (548)
++.++.+.|.. ..+|+++.+...... ...+++|..|.++|||+++|+|++||+|++|||.++.++++.++.++
T Consensus 4 dp~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~ 83 (103)
T 2fcf_A 4 QPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEA 83 (103)
T ss_dssp SCEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 45778887754 568999987543211 11379999999999999999999999999999999999999999999
Q ss_pred HHHcCCCceeEEEEecc
Q psy6405 200 LKKLNDGTIQDIKALGY 216 (548)
Q Consensus 200 Lrs~~g~~V~LlV~Ril 216 (548)
++... ..+.+.+.|..
T Consensus 84 l~~~~-~~v~l~v~r~~ 99 (103)
T 2fcf_A 84 IRKAG-NPVVFMVQSII 99 (103)
T ss_dssp HHTCC-SSEEEEEECCC
T ss_pred HHhCC-CcEEEEEEECC
Confidence 99874 48888888754
No 266
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.84 E-value=9.5e-09 Score=85.08 Aligned_cols=82 Identities=27% Similarity=0.426 Sum_probs=67.9
Q ss_pred eEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCce
Q psy6405 129 VEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTI 208 (548)
Q Consensus 129 VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V 208 (548)
++|++. .+.++||++.++.... .+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++.. +..+
T Consensus 5 ~~v~~~-~~~~~G~~l~gg~~~~---~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v 78 (89)
T 2q3g_A 5 FKVVLE-GPAPWGFRLQGGKDFN---VPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRAC-GERL 78 (89)
T ss_dssp EEEEEE-SSSCCCEEEEEEGGGT---EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTC-TTEE
T ss_pred EEEEEc-CCCcccEEEECcCCCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEE
Confidence 455554 4578999998754321 358999999999999999 999999999999999999999999999876 6778
Q ss_pred eEEEEecc
Q psy6405 209 QDIKALGY 216 (548)
Q Consensus 209 ~LlV~Ril 216 (548)
.+.+.|..
T Consensus 79 ~l~v~R~~ 86 (89)
T 2q3g_A 79 SLGLSRAI 86 (89)
T ss_dssp EEEEEEEC
T ss_pred EEEEEeCC
Confidence 88888754
No 267
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.83 E-value=1.3e-08 Score=85.89 Aligned_cols=87 Identities=25% Similarity=0.229 Sum_probs=69.8
Q ss_pred eEEEEEecCcceeEEEecCCCCC----CCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 129 VEITLIKDGAGLGFSLEGGKDSP----FGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 129 VtVtV~RdGkgLGfSItgg~~s~----lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
.++++.|.+.++||++....... ....+++|..|.++|||+++| |+.||+|++|||.++.++++.++..+++..
T Consensus 4 ~~v~l~~~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~- 81 (99)
T 3khf_A 4 PPIVIHSSGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKS- 81 (99)
T ss_dssp CCEEEEC-CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHS-
T ss_pred CCEEEEeCCCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC-
Confidence 45778888999999997543211 101246899999999999999 999999999999999999999999999954
Q ss_pred CCceeEEEEeccc
Q psy6405 205 DGTIQDIKALGYD 217 (548)
Q Consensus 205 g~~V~LlV~RilD 217 (548)
+..+.+.+.|...
T Consensus 82 g~~v~l~v~r~~~ 94 (99)
T 3khf_A 82 GNKISLRTTALEN 94 (99)
T ss_dssp CSEEEEEEECSCS
T ss_pred CCEEEEEEEECCC
Confidence 7788999888543
No 268
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.82 E-value=3.9e-09 Score=94.08 Aligned_cols=83 Identities=31% Similarity=0.435 Sum_probs=69.2
Q ss_pred ecCcceeEEEecCCCCCC-CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc------CCCc
Q psy6405 135 KDGAGLGFSLEGGKDSPF-GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL------NDGT 207 (548)
Q Consensus 135 RdGkgLGfSItgg~~s~l-G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~------~g~~ 207 (548)
+...++||+|.++..... +..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++++|+.. .+..
T Consensus 34 ~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~~ 113 (127)
T 1wg6_A 34 SGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRGM 113 (127)
T ss_dssp STTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTCE
T ss_pred CCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhccccCCCCE
Confidence 566789999987643211 123699999999999999999999999999999999999999999999975 4678
Q ss_pred eeEEEEeccc
Q psy6405 208 IQDIKALGYD 217 (548)
Q Consensus 208 V~LlV~RilD 217 (548)
|.+++.|...
T Consensus 114 v~l~v~R~~~ 123 (127)
T 1wg6_A 114 IQLVILRRSG 123 (127)
T ss_dssp EEEEEEECSC
T ss_pred EEEEEEeCCC
Confidence 9999988653
No 269
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.82 E-value=5.4e-09 Score=90.29 Aligned_cols=89 Identities=25% Similarity=0.426 Sum_probs=73.6
Q ss_pred CeEEEEEecC-cceeEEEecCCCCC------CCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy6405 128 PVEITLIKDG-AGLGFSLEGGKDSP------FGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLL 200 (548)
Q Consensus 128 ~VtVtV~RdG-kgLGfSItgg~~s~------lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelL 200 (548)
...|++.|.. .++||+|.++.... -...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.++
T Consensus 10 ~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l 89 (111)
T 1uju_A 10 LRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLL 89 (111)
T ss_dssp SSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHH
T ss_pred cEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4668888764 88999999876321 1124799999999999999999999999999999999999999999999
Q ss_pred HHcCCCceeEEEEeccc
Q psy6405 201 KKLNDGTIQDIKALGYD 217 (548)
Q Consensus 201 rs~~g~~V~LlV~RilD 217 (548)
+.. +..+.+++.|..+
T Consensus 90 ~~~-g~~v~l~v~r~~~ 105 (111)
T 1uju_A 90 RSV-GDTLTVLVCDGFE 105 (111)
T ss_dssp SSC-SSEEEECCCCCCC
T ss_pred HcC-CCeEEEEEEECCC
Confidence 874 6778888877654
No 270
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.82 E-value=6e-08 Score=85.41 Aligned_cols=90 Identities=24% Similarity=0.342 Sum_probs=74.3
Q ss_pred CeEEEEEec-CcceeEEEecCCCCC-CCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC-
Q psy6405 128 PVEITLIKD-GAGLGFSLEGGKDSP-FGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN- 204 (548)
Q Consensus 128 ~VtVtV~Rd-GkgLGfSItgg~~s~-lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~- 204 (548)
.++|++.|. ..++||+|....... ....+++|..|.++|||+++|.|++||+|++|||+++.++++.++.++++...
T Consensus 16 ~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 95 (122)
T 1v5q_A 16 TTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSI 95 (122)
T ss_dssp EEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHTT
T ss_pred eEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 466777776 488999998752111 11236899999999999999999999999999999999999999999999876
Q ss_pred CCceeEEEEeccc
Q psy6405 205 DGTIQDIKALGYD 217 (548)
Q Consensus 205 g~~V~LlV~RilD 217 (548)
+..+.+.+.|...
T Consensus 96 g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 96 TSKVTLEIEFDVA 108 (122)
T ss_dssp TTCEEEEEEEECC
T ss_pred CCeEEEEEEECCc
Confidence 7789999998754
No 271
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.80 E-value=3.8e-08 Score=85.60 Aligned_cols=83 Identities=27% Similarity=0.435 Sum_probs=70.3
Q ss_pred CCeEEEEEecCc-ceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCC-CCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 127 PPVEITLIKDGA-GLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQL-KAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 127 ~~VtVtV~RdGk-gLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrL-q~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
....|.+.|... ++||++.... .+++|..|.++|||+++| | ++||+|++|||+++.++++.++.++++...
T Consensus 25 ~~~~v~l~k~~~~~lG~~i~~~~------~gv~V~~V~~~spA~~aG-ll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 97 (113)
T 1va8_A 25 TVKIVRIEKARDIPLGATVRNEM------DSVIISRIVKGGAAEKSG-LLHEGDEVLEINGIEIRGKDVNEVFDLLSDMH 97 (113)
T ss_dssp ECEEEEEEECTTCCCCEEEEECS------SSEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred ceEEEEEEeCCCCceeEEEEeCC------CCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 446688888766 8999997653 359999999999999999 7 999999999999999999999999998874
Q ss_pred CCceeEEEEeccc
Q psy6405 205 DGTIQDIKALGYD 217 (548)
Q Consensus 205 g~~V~LlV~RilD 217 (548)
..+.+++.|...
T Consensus 98 -~~v~l~v~r~~~ 109 (113)
T 1va8_A 98 -GTLTFVLIPSSG 109 (113)
T ss_dssp -EEEEEEEECCCC
T ss_pred -CeEEEEEEECCc
Confidence 578888877543
No 272
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.79 E-value=4e-08 Score=84.54 Aligned_cols=87 Identities=22% Similarity=0.315 Sum_probs=70.4
Q ss_pred CeEEEEEe-cCcceeEEEecCCCCCC---------CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHH
Q psy6405 128 PVEITLIK-DGAGLGFSLEGGKDSPF---------GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAW 197 (548)
Q Consensus 128 ~VtVtV~R-dGkgLGfSItgg~~s~l---------G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~Eav 197 (548)
+..+++.| ...++||+|.++..... ...+++|..|.++|||+++| |+.||+|++|||+++.++++.+++
T Consensus 8 ~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~ 86 (109)
T 1q3o_A 8 EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVV 86 (109)
T ss_dssp EEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHH
T ss_pred cEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHH
Confidence 35677764 56789999987654210 01268999999999999999 999999999999999999999999
Q ss_pred HHHHHcCCCceeEEEEecc
Q psy6405 198 SLLKKLNDGTIQDIKALGY 216 (548)
Q Consensus 198 elLrs~~g~~V~LlV~Ril 216 (548)
++++.. +..+.+++.|..
T Consensus 87 ~~l~~~-~~~v~l~v~~~~ 104 (109)
T 1q3o_A 87 NMIRQG-GNTLMVKVVMVT 104 (109)
T ss_dssp HHHHHT-TTEEEEEEEEEE
T ss_pred HHHHhC-CCEEEEEEEECC
Confidence 999886 667888887754
No 273
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.79 E-value=4.4e-08 Score=82.99 Aligned_cols=83 Identities=25% Similarity=0.349 Sum_probs=69.6
Q ss_pred eEEEEEecCc-ceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCc
Q psy6405 129 VEITLIKDGA-GLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGT 207 (548)
Q Consensus 129 VtVtV~RdGk-gLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~ 207 (548)
..|++.|... .+||++....... .+++|..|.++|||+++| |++||+|++|||.++.++++.+++..++. +..
T Consensus 12 ~~v~l~~~~~~~lG~~~~~~~~~~---~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~--~~~ 85 (100)
T 2eeh_A 12 HSVRVEKSPAGRLGFSVRGGSEHG---LGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTS--SSR 85 (100)
T ss_dssp CCEEECCCSSSSCSEEEECCTTTT---CCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHS--CSS
T ss_pred EEEEEEECCCCCccEEEEccccCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC--CCE
Confidence 5677777654 4999998764321 369999999999999999 99999999999999999988888888876 578
Q ss_pred eeEEEEeccc
Q psy6405 208 IQDIKALGYD 217 (548)
Q Consensus 208 V~LlV~RilD 217 (548)
+.+.+.|...
T Consensus 86 v~l~v~R~g~ 95 (100)
T 2eeh_A 86 LHMMVRRMGS 95 (100)
T ss_dssp EEEEEEECSC
T ss_pred EEEEEEECCc
Confidence 8999988654
No 274
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.79 E-value=5.2e-08 Score=83.91 Aligned_cols=86 Identities=29% Similarity=0.487 Sum_probs=73.0
Q ss_pred eEEEEEec-CcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCC-CCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 129 VEITLIKD-GAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQL-KAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 129 VtVtV~Rd-GkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrL-q~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
++|++.|. ..++||++...... .+++|..|.++|||+++| + +.||+|++|||.++.++++.++.++++...+.
T Consensus 3 ~~v~l~~~~~~glG~~~~~~~~~----~~~~V~~v~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~ 77 (112)
T 1qau_A 3 ISVRLFKRKVGGLGFLVKERVSK----PPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRGIASE 77 (112)
T ss_dssp EEEEEECBTTTBTSEEEEECSSS----SCEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSS
T ss_pred EEEEEEcCCCCceeEEEEecCCC----CCEEEEEeCCCChHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 56777664 57899999876532 369999999999999999 7 99999999999999999999999999987678
Q ss_pred ceeEEEEeccccC
Q psy6405 207 TIQDIKALGYDLN 219 (548)
Q Consensus 207 ~V~LlV~RilDLr 219 (548)
.+.+.+.|.....
T Consensus 78 ~v~l~v~R~g~~~ 90 (112)
T 1qau_A 78 THVVLILRGPEGF 90 (112)
T ss_dssp SEEEEEEECCTTS
T ss_pred cEEEEEEeCCccc
Confidence 9999999976544
No 275
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.79 E-value=2.3e-08 Score=87.88 Aligned_cols=82 Identities=35% Similarity=0.550 Sum_probs=67.0
Q ss_pred EEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc---CCCc
Q psy6405 131 ITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL---NDGT 207 (548)
Q Consensus 131 VtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~---~g~~ 207 (548)
+.+.+. .++||+|.++..... .+++|.+|.++|||+++|.|++||+|++|||+++.++++.+++++|+.. .+..
T Consensus 22 ~~~~~~-~glG~~i~gg~~~~~--~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~ 98 (118)
T 1v6b_A 22 LRIKKE-GSLDLALEGGVDSPV--GKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDW 98 (118)
T ss_dssp EEEESC-SCCCCEEEEBTTSSS--CSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSE
T ss_pred EEECCC-CccCEEEEcccCCCC--CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCe
Confidence 334444 589999987765432 2499999999999999944999999999999999999999999999875 3678
Q ss_pred eeEEEEec
Q psy6405 208 IQDIKALG 215 (548)
Q Consensus 208 V~LlV~Ri 215 (548)
+.+.+.|.
T Consensus 99 v~l~v~r~ 106 (118)
T 1v6b_A 99 IDLVVAVC 106 (118)
T ss_dssp EEEEEECC
T ss_pred EEEEEEeC
Confidence 88888874
No 276
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.78 E-value=2.2e-08 Score=89.03 Aligned_cols=91 Identities=21% Similarity=0.304 Sum_probs=74.1
Q ss_pred CCCCeEEEEEec--CcceeEEEecCCCC---CCC---CCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHH
Q psy6405 125 RGPPVEITLIKD--GAGLGFSLEGGKDS---PFG---DQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEA 196 (548)
Q Consensus 125 ~g~~VtVtV~Rd--GkgLGfSItgg~~s---~lG---~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~Ea 196 (548)
+.....|++.|. +.++||+|.++... ..+ ..+++|..|.++|||+++|.|++||+|++|||.++.++++.++
T Consensus 27 ~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~ 106 (128)
T 1nf3_C 27 PETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQV 106 (128)
T ss_dssp CTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHH
T ss_pred CCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHH
Confidence 455678888887 47899999865421 111 1269999999999999999889999999999999999999999
Q ss_pred HHHHHHcCCCceeEEEEecc
Q psy6405 197 WSLLKKLNDGTIQDIKALGY 216 (548)
Q Consensus 197 velLrs~~g~~V~LlV~Ril 216 (548)
+.+++.. +..+.+.+.|..
T Consensus 107 ~~~l~~~-~~~v~l~v~r~~ 125 (128)
T 1nf3_C 107 TDMMIAN-SRNLIITVRPAN 125 (128)
T ss_dssp HHHHHHT-TTSEEEEEECCC
T ss_pred HHHHHcC-CCeEEEEEEECC
Confidence 9999976 567888888754
No 277
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.78 E-value=4.9e-08 Score=86.64 Aligned_cols=90 Identities=22% Similarity=0.339 Sum_probs=72.2
Q ss_pred CCCeEEEEEec-CcceeEEEecCCCCCC------CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHH
Q psy6405 126 GPPVEITLIKD-GAGLGFSLEGGKDSPF------GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWS 198 (548)
Q Consensus 126 g~~VtVtV~Rd-GkgLGfSItgg~~s~l------G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~Eave 198 (548)
..+..+++.|. ...+||++.+...... ...+++|..|.++|||+++|+|++||+|++|||+++.++++.++++
T Consensus 23 ~~p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~ 102 (123)
T 2iwq_A 23 MQPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVE 102 (123)
T ss_dssp CCCEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCCEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 34577888775 4679999976543210 1247999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCceeEEEEecc
Q psy6405 199 LLKKLNDGTIQDIKALGY 216 (548)
Q Consensus 199 lLrs~~g~~V~LlV~Ril 216 (548)
+++.. +..+.+.+.|..
T Consensus 103 ~l~~~-~~~v~l~v~r~~ 119 (123)
T 2iwq_A 103 AIRKA-GNPVVFMVQSII 119 (123)
T ss_dssp HHHHC-CSSEEEEEECCC
T ss_pred HHHcC-CCeEEEEEEECC
Confidence 99987 458888888754
No 278
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.78 E-value=8.8e-09 Score=87.22 Aligned_cols=86 Identities=27% Similarity=0.460 Sum_probs=72.2
Q ss_pred CCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
..+.+++.+...++||++..+.... .+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.. +.
T Consensus 11 ~~~~v~l~~~~~g~G~~~~~~~~~~---~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g~ 86 (103)
T 1wfv_A 11 DYFTVDMEKGAKGFGFSIRGGREYK---MDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSG-GR 86 (103)
T ss_dssp CCEECCEECCTTSSSBCCEEETTTT---EEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHH-CS
T ss_pred eEEEEEEecCCCcCCEEEeccccCC---CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CC
Confidence 3466777787788999998765431 2589999999999999999999999999999999999999999999854 67
Q ss_pred ceeEEEEecc
Q psy6405 207 TIQDIKALGY 216 (548)
Q Consensus 207 ~V~LlV~Ril 216 (548)
.+.+.+.|..
T Consensus 87 ~v~l~v~R~~ 96 (103)
T 1wfv_A 87 RVRLLLKRGT 96 (103)
T ss_dssp EECEEEECTT
T ss_pred eEEEEEEECC
Confidence 8889888754
No 279
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.78 E-value=4.5e-08 Score=83.38 Aligned_cols=89 Identities=20% Similarity=0.263 Sum_probs=69.8
Q ss_pred CCCeEEEEEe-cCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc-
Q psy6405 126 GPPVEITLIK-DGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL- 203 (548)
Q Consensus 126 g~~VtVtV~R-dGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~- 203 (548)
.....|.+.| .+.++||++...... ....+++|..|.++|||++++.|++||+|++|||.++.+.++.++.++|+..
T Consensus 8 ~~~~~v~l~k~~g~~lG~~i~~~~~~-~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~ 86 (101)
T 2yt7_A 8 DNCREVHLEKRRGEGLGVALVESGWG-SLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETK 86 (101)
T ss_dssp CCCEEEEEECCTTCCCCEEEEECCCS-SSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTT
T ss_pred CceEEEEEEeCCCCccCEEEEeCCCC-CCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 3446777776 447899999753211 1123589999999999999555999999999999999999999999999985
Q ss_pred CCCceeEEEEec
Q psy6405 204 NDGTIQDIKALG 215 (548)
Q Consensus 204 ~g~~V~LlV~Ri 215 (548)
.+..+.+.+.|.
T Consensus 87 ~g~~v~l~v~R~ 98 (101)
T 2yt7_A 87 SQTSVTLSIVHC 98 (101)
T ss_dssp TSSEEEEEECCC
T ss_pred CCCeEEEEEEeC
Confidence 567888888663
No 280
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.78 E-value=2.8e-08 Score=84.48 Aligned_cols=86 Identities=31% Similarity=0.473 Sum_probs=71.0
Q ss_pred CCCeEEEEEecCcceeEEEecCCCC---CC--CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy6405 126 GPPVEITLIKDGAGLGFSLEGGKDS---PF--GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLL 200 (548)
Q Consensus 126 g~~VtVtV~RdGkgLGfSItgg~~s---~l--G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelL 200 (548)
...+.|++.|.+ ++||++.++... +. ...+++|..|.++|||++ | |++||+|++|||.++.++++.+++..+
T Consensus 10 ~~~~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~ 86 (103)
T 1n7t_A 10 KQEIRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLL 86 (103)
T ss_dssp CCCEEEEEECSS-CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred cEEEEEEEccCC-CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHHHHh
Confidence 455778888765 899999986531 11 234799999999999999 8 999999999999999999999999999
Q ss_pred HHcCCCceeEEEEec
Q psy6405 201 KKLNDGTIQDIKALG 215 (548)
Q Consensus 201 rs~~g~~V~LlV~Ri 215 (548)
+.. +..+.+++.|.
T Consensus 87 ~~~-g~~v~l~v~R~ 100 (103)
T 1n7t_A 87 KTF-QNTVELIIVRE 100 (103)
T ss_dssp HHC-CSEEEEEEECC
T ss_pred hcC-CCeEEEEEEec
Confidence 865 67888888875
No 281
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.78 E-value=3e-08 Score=87.41 Aligned_cols=88 Identities=24% Similarity=0.240 Sum_probs=75.2
Q ss_pred CCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 126 GPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 126 g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
-.+..+++.|...++||++...... .+++|..|.++|||+++| |+.||+|++|||.++.++++.++..+++...+
T Consensus 8 ~~~r~v~l~~~~~g~G~~l~~~~~~----~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 82 (128)
T 2kjd_A 8 LRPRLCTMKKGPSGYGFNLHSDKSK----PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGD 82 (128)
T ss_dssp CCCEEEEEECCSSSCCEEEEECSSS----CSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTCS
T ss_pred CCcEEEEEecCCCcccEEEEecCCC----CCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 3457788899889999999876532 369999999999999999 99999999999999999999999999998766
Q ss_pred CceeEEEEecccc
Q psy6405 206 GTIQDIKALGYDL 218 (548)
Q Consensus 206 ~~V~LlV~RilDL 218 (548)
..+.+.+.|....
T Consensus 83 ~~~~l~v~R~g~~ 95 (128)
T 2kjd_A 83 ETKLLVVDRETDE 95 (128)
T ss_dssp EEEEEEECHHHHH
T ss_pred CEEEEEEEeCCcc
Confidence 6777888886543
No 282
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.77 E-value=2.6e-08 Score=88.15 Aligned_cols=91 Identities=26% Similarity=0.329 Sum_probs=68.4
Q ss_pred CCCCeEEEEEec-CcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc
Q psy6405 125 RGPPVEITLIKD-GAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL 203 (548)
Q Consensus 125 ~g~~VtVtV~Rd-GkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~ 203 (548)
.+...+++|... ...+||++....... .+++|..|.++|||+++| |++||+|++|||.++.++++.++++.++..
T Consensus 18 ~g~~~~v~v~~~~~~~lG~~~~~~~~~~---~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 93 (128)
T 1uf1_A 18 GGDEKKVNLVLGDGRSLGLTIRGGAEYG---LGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKSS 93 (128)
T ss_dssp CSSEEEEEEECCSSCCCCEEEECCTTTT---CCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTTC
T ss_pred CCcEEEEEEEECCCCccCEEEECcccCC---CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 344455555532 245777776643221 368999999999999999 999999999999999999987888877663
Q ss_pred CCCceeEEEEeccccCCC
Q psy6405 204 NDGTIQDIKALGYDLNSL 221 (548)
Q Consensus 204 ~g~~V~LlV~RilDLr~~ 221 (548)
..+.+.+.|.......
T Consensus 94 --~~v~l~v~R~g~~~~~ 109 (128)
T 1uf1_A 94 --RHLILTVKDVGRLPHA 109 (128)
T ss_dssp --SEEEEEEECCSCCSSC
T ss_pred --CeEEEEEEECCccccc
Confidence 5888999887665443
No 283
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.77 E-value=3.9e-08 Score=85.61 Aligned_cols=87 Identities=22% Similarity=0.380 Sum_probs=71.4
Q ss_pred CCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
..+.|.+.+....+|+++...... +++|..|.++|||+++| |++||+|++|||+++.++++.++...++. .+.
T Consensus 19 ~~~~v~l~~~~~~lG~~~~~~~~~-----gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~-~g~ 91 (117)
T 1uit_A 19 EPRHVKVQKGSEPLGISIVSGEKG-----GIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQ-QCD 91 (117)
T ss_dssp CCEEEEEECSSCCCCEEEEECTTS-----CEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTS-CCS
T ss_pred CCEEEEEEeCCCCccEEEEccCCC-----CEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc-CCC
Confidence 445788888888899999876433 69999999999999999 99999999999999999998776655543 467
Q ss_pred ceeEEEEeccccCC
Q psy6405 207 TIQDIKALGYDLNS 220 (548)
Q Consensus 207 ~V~LlV~RilDLr~ 220 (548)
.+.+.+.|..+...
T Consensus 92 ~v~l~v~r~~~~~~ 105 (117)
T 1uit_A 92 TITILAQYNPHVHQ 105 (117)
T ss_dssp EEEEEECCCSCCCC
T ss_pred eEEEEEEECCchhh
Confidence 88999988765443
No 284
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.77 E-value=2.2e-08 Score=85.41 Aligned_cols=82 Identities=24% Similarity=0.406 Sum_probs=62.2
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCC------CCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHH
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSD------YESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAI 122 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d------~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~ 122 (548)
..++.+.+.+. ...+|||++.+... ....+++|..|.++|||+++| |++||+|++|||+++.++++.+++..
T Consensus 14 ~~~~~v~l~~~-~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~ 91 (104)
T 2z17_A 14 SQRKLVTVEKQ-DNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDL 91 (104)
T ss_dssp SCCCEEEEECC-TTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHH
T ss_pred CcceEEEEEeC-CCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHH
Confidence 34566778886 36789999997321 113589999999999999999 99999999999999998888776655
Q ss_pred hhC-CCCeEEE
Q psy6405 123 LKR-GPPVEIT 132 (548)
Q Consensus 123 lk~-g~~VtVt 132 (548)
++. +..+.|+
T Consensus 92 l~~~~~~v~l~ 102 (104)
T 2z17_A 92 IRSSGNLLTIE 102 (104)
T ss_dssp HHHTTTEEEEE
T ss_pred HHhCCCcEEEE
Confidence 543 2344444
No 285
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.77 E-value=1.4e-08 Score=85.11 Aligned_cols=85 Identities=27% Similarity=0.356 Sum_probs=69.5
Q ss_pred CeEEEEEe-cCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 128 PVEITLIK-DGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 128 ~VtVtV~R-dGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
.+.+++.+ ...++||++..+.... .+++|..|.++|||+++| |++||+|++|||.++.++++.++.++++... .
T Consensus 5 ~~~~~~~~~~~~~lG~~l~~g~~~~---~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~ 79 (94)
T 1vb7_A 5 SSGLTVDVAGPAPWGFRISGGRDFH---TPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSA-S 79 (94)
T ss_dssp CCCEEEEECSSSCCSBCCEEETTTT---EEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCC-S
T ss_pred cEEEEEEecCCCCccEEEecccCCC---CCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-C
Confidence 44555554 4567999998754331 358999999999999999 9999999999999999999999999999875 7
Q ss_pred ceeEEEEeccc
Q psy6405 207 TIQDIKALGYD 217 (548)
Q Consensus 207 ~V~LlV~RilD 217 (548)
.+.+.+.|...
T Consensus 80 ~v~l~v~R~g~ 90 (94)
T 1vb7_A 80 PLRLQLDRSSG 90 (94)
T ss_dssp SEEEEEECCCC
T ss_pred cEEEEEEECCc
Confidence 88999988643
No 286
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.76 E-value=2.4e-08 Score=83.21 Aligned_cols=76 Identities=32% Similarity=0.441 Sum_probs=63.3
Q ss_pred EEEEEe--cCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCc
Q psy6405 130 EITLIK--DGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGT 207 (548)
Q Consensus 130 tVtV~R--dGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~ 207 (548)
.+++.+ ....+||++.. +++|..|.++|||+++|+|+.||+|++|||+++.++++.++++++++. +..
T Consensus 3 ~v~l~~~~~~~~~G~~~~~---------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~-~~~ 72 (88)
T 3e17_A 3 GVLLMKSRANEEYGLRLGS---------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKS-RGK 72 (88)
T ss_dssp EEEEECBTTBCCCCEEEEE---------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHT-TTE
T ss_pred EEEEEeCCCCCCCCEEEeC---------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCe
Confidence 455554 34568888864 499999999999999999999999999999999999999999999987 457
Q ss_pred eeEEEEec
Q psy6405 208 IQDIKALG 215 (548)
Q Consensus 208 V~LlV~Ri 215 (548)
+.+++.+.
T Consensus 73 v~L~v~~~ 80 (88)
T 3e17_A 73 LQLVVLRD 80 (88)
T ss_dssp EEEEECCC
T ss_pred EEEEEeCC
Confidence 77777553
No 287
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.76 E-value=4.4e-08 Score=88.82 Aligned_cols=91 Identities=29% Similarity=0.398 Sum_probs=72.1
Q ss_pred CeEEEEEecCc----ceeEEEecCCCC-----CC----CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHH
Q psy6405 128 PVEITLIKDGA----GLGFSLEGGKDS-----PF----GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRI 194 (548)
Q Consensus 128 ~VtVtV~RdGk----gLGfSItgg~~s-----~l----G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~ 194 (548)
...|++.+.+. .+||++.++... .+ ...+++|..|.++|||+++| |++||+|++|||.++.++++.
T Consensus 24 ~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~ 102 (139)
T 2vz5_A 24 VQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHD 102 (139)
T ss_dssp EEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHH
T ss_pred eEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCCCHH
Confidence 35677776543 699999765431 11 12589999999999999999 999999999999999999999
Q ss_pred HHHHHHHHcCCCceeEEEEeccccC
Q psy6405 195 EAWSLLKKLNDGTIQDIKALGYDLN 219 (548)
Q Consensus 195 EavelLrs~~g~~V~LlV~RilDLr 219 (548)
++.++++...+..+.+.+.|.....
T Consensus 103 ~~~~~l~~~~g~~v~l~v~R~g~~~ 127 (139)
T 2vz5_A 103 QARKRLTKRSEEVVRLLVTRQSLQK 127 (139)
T ss_dssp HHHHHHCCTTCSEEEEEEEECC---
T ss_pred HHHHHHHhCCCCEEEEEEEECCEEE
Confidence 9999998866778999999876533
No 288
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.75 E-value=2.3e-08 Score=104.38 Aligned_cols=180 Identities=17% Similarity=0.223 Sum_probs=112.3
Q ss_pred cccccCCCccCCCCCCCCeEEEEEeeC----------CCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCE
Q psy6405 33 QSLDEGGCPSLLIPGTSEVSVVVLHRD----------LPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDR 102 (548)
Q Consensus 33 ~~~~~dgai~gml~~~~d~~tV~L~Kd----------~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDr 102 (548)
...++..++.+|+....++++.++..+ ..+.|+|+.+.... ....+++|..|.++|||+++| |++||+
T Consensus 45 ~~~~~~~~i~~ml~~L~D~hs~~~~~~~~~~~~~~~~g~~~giG~~~~~~~-~~~~~~~V~~v~~~spA~~aG-l~~GD~ 122 (388)
T 1fc6_A 45 RRAQTYDAIRKMLAVLDDPFTRFLEPSRLAALRRGTAGSVTGVGLEITYDG-GSGKDVVVLTPAPGGPAEKAG-ARAGDV 122 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCTTCEEECHHHHHHHHHCSSSSCBBCSEEEEECT-TCSSCEEEEEECTTSHHHHTT-CCTTCE
T ss_pred CHHHHHHHHHHHHHhcCCCcceecCHHHHHHHHHhhcCceEEEEEEEEEee-cCCCcEEEEEeCCCChHHHcC-CCCCCE
Confidence 344555677888887888888776432 23568999987531 113579999999999999999 999999
Q ss_pred EEEECCeeccCccHHHHHHHhh--CCCCeEEEEEecCc---ceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCC-CC
Q psy6405 103 ILSINGKSMKGLTHKESLAILK--RGPPVEITLIKDGA---GLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQL-KA 176 (548)
Q Consensus 103 ILaINGv~V~~~s~~~aV~~lk--~g~~VtVtV~RdGk---gLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrL-q~ 176 (548)
|++|||+++.+++..++...++ .+..+.|+|.|.+. .+.++|+...-. ..++....+..-. ...-.. ..
T Consensus 123 I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g~~~~~~~~~l~r~~i~---~~~v~~~~~~~~~--~~~~~~~~~ 197 (388)
T 1fc6_A 123 IVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPGAPSNTRTLQLTRQKVT---INPVTFTTCSNVA--AAALPPGAA 197 (388)
T ss_dssp EEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETTEEEEEEEEEEECBCCC---CCCEEEEEECSCC--GGGSCTTCS
T ss_pred EEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCCCCcceEEEEEEEceee---cCceeeeeecccc--ccccccccC
Confidence 9999999999987665554443 57789999999887 677777765422 1123322221000 000001 12
Q ss_pred CCEEEEECCEEcCCCCHHHHHHHHHHcCCCceeEEEEeccccCCCC
Q psy6405 177 GDEILTINNVPVTEMSRIEAWSLLKKLNDGTIQDIKALGYDLNSLG 222 (548)
Q Consensus 177 GDrILaVNGvsV~~~t~~EavelLrs~~g~~V~LlV~RilDLr~~~ 222 (548)
++.|..|.-.++..-+..++.+.++...... +...++|+|...
T Consensus 198 ~~~igYi~i~~F~~~~~~~~~~~l~~l~~~~---~~~lIlDLR~N~ 240 (388)
T 1fc6_A 198 KQQLGYVRLATFNSNTTAAAQQAFTELSKQG---VAGLVLDIRNNG 240 (388)
T ss_dssp SSCEEEEEECCBSTTHHHHHHHHHHHHHHTT---CSEEEEECTTCC
T ss_pred CCCEEEEEeCccCcchHHHHHHHHHHHHhCC---CCeEEEEcCCCC
Confidence 3455555444444444456666665432211 234566777553
No 289
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.75 E-value=3.3e-08 Score=83.47 Aligned_cols=82 Identities=22% Similarity=0.339 Sum_probs=68.6
Q ss_pred CCeEEEEEe-cCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 127 PPVEITLIK-DGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 127 ~~VtVtV~R-dGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
..+++++.+ ...++||++.... .+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++.. +
T Consensus 8 ~~~~v~l~~~~~~glG~~~~~~~------~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~-~ 80 (96)
T 2qkv_A 8 EKFNVDLMKKAGKELGLSLSPNE------IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGA-N 80 (96)
T ss_dssp CCEEEEEECBTTBCCCEEEEECS------SSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTC-S
T ss_pred ceEEEEEEeCCCCCccEEEEeCC------CcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-C
Confidence 446777764 6678999987622 3699999999999999999999999999999999999998988888876 4
Q ss_pred CceeEEEEec
Q psy6405 206 GTIQDIKALG 215 (548)
Q Consensus 206 ~~V~LlV~Ri 215 (548)
..+.+.+.|.
T Consensus 81 ~~v~l~v~R~ 90 (96)
T 2qkv_A 81 GKVSMEVTRP 90 (96)
T ss_dssp SEEEEEEECC
T ss_pred CcEEEEEEeC
Confidence 5788888774
No 290
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.75 E-value=4.5e-08 Score=78.70 Aligned_cols=75 Identities=23% Similarity=0.461 Sum_probs=57.5
Q ss_pred EEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh-CCCCeEEEE
Q psy6405 55 VLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK-RGPPVEITL 133 (548)
Q Consensus 55 ~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g~~VtVtV 133 (548)
.+.+. ....|||.+. .+++|..|.++|||+++|+|++||+|++|||.++.+++..++...+. .+..+.++|
T Consensus 6 ~~~~~-~~~~~g~~~~-------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v 77 (81)
T 2rcz_A 6 LVKSR-KNEEYGLRLA-------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVV 77 (81)
T ss_dssp EECCS-TTCCCCEEEE-------EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEE
T ss_pred EEECC-CCCCCCEEEe-------CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEE
Confidence 34444 4678898887 36899999999999999999999999999999999777666554443 334677888
Q ss_pred EecC
Q psy6405 134 IKDG 137 (548)
Q Consensus 134 ~RdG 137 (548)
.|++
T Consensus 78 ~R~g 81 (81)
T 2rcz_A 78 QRDE 81 (81)
T ss_dssp EC--
T ss_pred EeCC
Confidence 7753
No 291
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.23 E-value=9.5e-10 Score=96.35 Aligned_cols=82 Identities=32% Similarity=0.618 Sum_probs=64.5
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhh-cCCCCCCCEEEEECCeeccCccHHHHHHHhh-CC
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADR-DGRLQKGDRILSINGKSMKGLTHKESLAILK-RG 126 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaq-AGrLq~GDrILaINGv~V~~~s~~~aV~~lk-~g 126 (548)
..+++|.+.|.. ..+|||++.++.+. ..+++|..|.++|||++ +| |++||+|++|||+++.+++..+++..++ .+
T Consensus 26 ~~~~~v~l~k~~-~~glG~~l~~g~~~-~~gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~ 102 (112)
T 2lob_A 26 QGIRKVLLLKED-HEGLGISITGGKEH-GVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQR 102 (112)
Confidence 456788888873 78999999987653 24789999999999999 88 9999999999999998887777665543 23
Q ss_pred CCeEEEE
Q psy6405 127 PPVEITL 133 (548)
Q Consensus 127 ~~VtVtV 133 (548)
..+.++|
T Consensus 103 ~~v~l~V 109 (112)
T 2lob_A 103 GEIEFEV 109 (112)
Confidence 3455544
No 292
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.75 E-value=9.4e-08 Score=83.66 Aligned_cols=87 Identities=24% Similarity=0.395 Sum_probs=70.5
Q ss_pred hCCCCeEEEEEecCcc-eeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHH
Q psy6405 124 KRGPPVEITLIKDGAG-LGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKK 202 (548)
Q Consensus 124 k~g~~VtVtV~RdGkg-LGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs 202 (548)
....+..|++.|...+ +||++..+.... .+++|..|.++|||+++|+|++||+|++|||.++.+.+..++.++++.
T Consensus 21 q~~~~~~V~l~~~~~~~lG~~l~~~~~~~---~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~ 97 (114)
T 2gzv_A 21 QSMVPGKVTLQKDAQNLIGISIGGGAQYC---PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQE 97 (114)
T ss_dssp -CCCCEEEEEECCTTSCCSEEEEECCC-----CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred ccCCCEEEEEEECCCCcEeEEEEeCCCCC---CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3456678888887654 999998765431 369999999999999999999999999999999988889999999987
Q ss_pred cCCCceeEEEEe
Q psy6405 203 LNDGTIQDIKAL 214 (548)
Q Consensus 203 ~~g~~V~LlV~R 214 (548)
.. ..+.+.+.+
T Consensus 98 ~~-~~v~l~v~~ 108 (114)
T 2gzv_A 98 VK-GEVTIHYNK 108 (114)
T ss_dssp CC-SEEEEEEEC
T ss_pred CC-CeEEEEEEe
Confidence 64 457776654
No 293
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.75 E-value=2.5e-08 Score=86.39 Aligned_cols=80 Identities=23% Similarity=0.350 Sum_probs=67.6
Q ss_pred eEEEEE-ecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCc
Q psy6405 129 VEITLI-KDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGT 207 (548)
Q Consensus 129 VtVtV~-RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~ 207 (548)
++|++. +.+.++|+++.... .+++|..|.++|||+++|+|++||+|++|||+++.+.++.++..+++.. +..
T Consensus 4 ~~v~L~k~~~~glG~~i~~~~------~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~-~~~ 76 (106)
T 2la8_A 4 FNVDLMKKAGKELGLSLSPNE------IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGA-NGK 76 (106)
T ss_dssp EEEEECCBSSSTTCCEEEECS------SSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSC-BSC
T ss_pred EEEEEEeCCCCccCEEEEeCC------CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCC-CCe
Confidence 456676 46678999887622 3699999999999999999999999999999999999999988888876 457
Q ss_pred eeEEEEec
Q psy6405 208 IQDIKALG 215 (548)
Q Consensus 208 V~LlV~Ri 215 (548)
+.+.+.|.
T Consensus 77 v~l~v~R~ 84 (106)
T 2la8_A 77 VSMEVTRP 84 (106)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 88888885
No 294
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.74 E-value=1.9e-08 Score=87.99 Aligned_cols=84 Identities=27% Similarity=0.369 Sum_probs=71.2
Q ss_pred CCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
.+..|.+.|.+.++||++.+. .+++|..|.+++||+++| |+.||+|++|||+++..+++.++.++++...+.
T Consensus 15 ~~r~v~l~~~~~~~G~~l~~~-------~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~ 86 (111)
T 1vae_A 15 PPRGIHFTVEEGDLGFTLRGN-------TPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGE 86 (111)
T ss_dssp CCCCCCEECCSSCCSCCEESS-------SSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTTTS
T ss_pred CCeEEEEEcCCCcccEEEeCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 345677888888899988644 258899999999999999 999999999999999988899999999988666
Q ss_pred ceeEEEEecccc
Q psy6405 207 TIQDIKALGYDL 218 (548)
Q Consensus 207 ~V~LlV~RilDL 218 (548)
.+.+.+.+..+.
T Consensus 87 ~v~l~V~~~~~~ 98 (111)
T 1vae_A 87 EVEMKVVSLLDS 98 (111)
T ss_dssp EECEEEECEECC
T ss_pred eEEEEEEecCCC
Confidence 788888876543
No 295
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.74 E-value=6.3e-08 Score=82.06 Aligned_cols=83 Identities=27% Similarity=0.363 Sum_probs=70.2
Q ss_pred CCCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 125 RGPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 125 ~g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
....+.+++.+...++||+|.... .+++|..|.++ |+++| |++||+|++|||+++.++++.+++++|+..+
T Consensus 8 ~~~~~~v~l~~~~~g~G~~i~~~~------~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 78 (96)
T 1ujv_A 8 QAELMTLTIVKGAQGFGFTIADSP------TGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILKDCP 78 (96)
T ss_dssp CCCCEEEEEECCSSSSSEEEEEET------TEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred CceEEEEEEEeCCCceeEEEEcCC------CCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 345688889998899999997432 24889999873 77888 9999999999999999999999999999975
Q ss_pred -CCceeEEEEecc
Q psy6405 205 -DGTIQDIKALGY 216 (548)
Q Consensus 205 -g~~V~LlV~Ril 216 (548)
+..+.+++.|..
T Consensus 79 ~g~~v~l~v~R~g 91 (96)
T 1ujv_A 79 IGSETSLIIHRGS 91 (96)
T ss_dssp TTSEEEEEEECCS
T ss_pred CCCEEEEEEEECC
Confidence 788999998864
No 296
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.74 E-value=2e-08 Score=85.34 Aligned_cols=80 Identities=25% Similarity=0.372 Sum_probs=67.9
Q ss_pred CeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCc
Q psy6405 128 PVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGT 207 (548)
Q Consensus 128 ~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~ 207 (548)
.+.+++.+...++||.+... .+++|..|.++|||+++| |++||+|++|||+++.++++.++.++++.. +..
T Consensus 16 ~~~v~l~~~~~g~G~~~~~~-------~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~ 86 (100)
T 1whd_A 16 KLQITIRRGKDGFGFTICCD-------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSC-PSE 86 (100)
T ss_dssp EEEEEEECCSSSSSCBCCCS-------SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHC-SSE
T ss_pred eEEEEEECCCCeeeEEEeCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCe
Confidence 36677777777888888654 258899999999999999 999999999999999999999999999886 445
Q ss_pred eeEEEEecc
Q psy6405 208 IQDIKALGY 216 (548)
Q Consensus 208 V~LlV~Ril 216 (548)
+.+++.|..
T Consensus 87 v~l~v~R~~ 95 (100)
T 1whd_A 87 IILLVWRVS 95 (100)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEECC
Confidence 888887753
No 297
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.74 E-value=3.9e-09 Score=103.00 Aligned_cols=94 Identities=17% Similarity=0.331 Sum_probs=74.5
Q ss_pred CCCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhC-C
Q psy6405 48 TSEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKR-G 126 (548)
Q Consensus 48 ~~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~-g 126 (548)
...++.|.+.+. ..+|||.+.++.+ ..+++|..|.++|||+++| |++||+|++|||++|.+++..+++..+.. +
T Consensus 7 ~~~~r~v~l~k~--~~glG~~l~~~~~--~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g 81 (216)
T 2krg_A 7 MLRPRLCTMKKG--PSGYGFNLHSDKS--KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGG 81 (216)
T ss_dssp TCCCEEEEEECC--SSSSCEEECCCSS--SCSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHHC
T ss_pred ccceEEEEEEeC--CCCceEEEEecCC--CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcC
Confidence 456789999987 5799999987653 2479999999999999999 99999999999999997766665544432 6
Q ss_pred CCe-EEEEEecCcce--eEEEec
Q psy6405 127 PPV-EITLIKDGAGL--GFSLEG 146 (548)
Q Consensus 127 ~~V-tVtV~RdGkgL--GfSItg 146 (548)
..+ .++|.|++..+ .+.++.
T Consensus 82 ~~v~~l~V~R~g~~~~~~v~v~p 104 (216)
T 2krg_A 82 DETKLLVVDRETDEFFKKCRVIP 104 (216)
T ss_dssp SEEEEEECCHHHHHHHHHHTCCC
T ss_pred CeEEEEEEEECCEEEEEEEEEEE
Confidence 677 88888887665 455543
No 298
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.73 E-value=1.7e-08 Score=86.75 Aligned_cols=86 Identities=31% Similarity=0.527 Sum_probs=73.1
Q ss_pred CCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 126 GPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 126 g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
..+..|++.|...++||++...... .+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++.. +
T Consensus 14 ~~~~~v~l~k~~~glG~~l~~~~~~----~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~-~ 88 (113)
T 1um7_A 14 REPRKIILHKGSTGLGFNIVGGEDG----EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRA-G 88 (113)
T ss_dssp CSEEEEEEECCSSCSSBCCBCCSTT----CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSC-C
T ss_pred CceEEEEEEECCCcccEEEEeccCC----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-C
Confidence 3457788999888999999876532 3689999999999999998999999999999999999999999888864 6
Q ss_pred CceeEEEEecc
Q psy6405 206 GTIQDIKALGY 216 (548)
Q Consensus 206 ~~V~LlV~Ril 216 (548)
..+.+++.|..
T Consensus 89 ~~v~l~v~r~~ 99 (113)
T 1um7_A 89 QSVTIVAQYRP 99 (113)
T ss_dssp SEEEEEEECCH
T ss_pred CcEEEEEEECc
Confidence 77888887753
No 299
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.72 E-value=2.4e-08 Score=88.36 Aligned_cols=67 Identities=24% Similarity=0.422 Sum_probs=54.8
Q ss_pred CCCeEEEEEcC--CChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhC-CCCeEEEEEecCcceeEEE
Q psy6405 77 SKEITVHKVIS--GTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKR-GPPVEITLIKDGAGLGFSL 144 (548)
Q Consensus 77 ~~gVvVs~V~p--GSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~-g~~VtVtV~RdGkgLGfSI 144 (548)
..+++|..|.+ +|||+++| |++||+|++|||+++.++++.++...+.. +..+.|+|.|++....+..
T Consensus 43 ~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g~~v~l~v~R~g~~~~~~~ 112 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIKQTSQTLQLLIEHDPVPQRLDQ 112 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHHCCSSCEEEEEEECSSCCCCCS
T ss_pred CCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHhCCCEEEEEEEECCEEEeeec
Confidence 35899999999 99999999 99999999999999999965555444433 6789999999887654444
No 300
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.70 E-value=6.1e-08 Score=81.27 Aligned_cols=81 Identities=25% Similarity=0.357 Sum_probs=67.2
Q ss_pred CCeEEEEEe-cCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 127 PPVEITLIK-DGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 127 ~~VtVtV~R-dGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
....|.+.| .+..+||++.... .+++|..|.++|||+++|.|++||+|++|||.++ +.++.++.++++.. +
T Consensus 6 ~~r~v~l~k~~~~~lG~~i~~~~------~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~-~ 77 (91)
T 2e7k_A 6 SGRMVGIRKTAGEHLGVTFRVEG------GELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNA-S 77 (91)
T ss_dssp CSCBCCBCCCTTCCCCEEEEESS------SSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTC-C
T ss_pred CcEEEEEEECCCCcEeEEEEecC------CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcC-C
Confidence 345566655 5678999998732 3699999999999999877999999999999999 88899999999986 5
Q ss_pred CceeEEEEec
Q psy6405 206 GTIQDIKALG 215 (548)
Q Consensus 206 ~~V~LlV~Ri 215 (548)
..+.+.+.|.
T Consensus 78 ~~v~l~v~~~ 87 (91)
T 2e7k_A 78 GSVILKILSG 87 (91)
T ss_dssp SSBCEEEECC
T ss_pred CeEEEEEEEC
Confidence 6788888764
No 301
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.69 E-value=5.9e-08 Score=84.26 Aligned_cols=85 Identities=32% Similarity=0.394 Sum_probs=71.7
Q ss_pred CCeEEEEEec-CcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 127 PPVEITLIKD-GAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 127 ~~VtVtV~Rd-GkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
++.++.+.+. ...+||.+...... .+++|..|.++|||+++| |++||+|++|||.++.++++.++.++++.. +
T Consensus 13 dp~~~~l~~~~~~~~G~~l~~~~~~----~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g 86 (114)
T 2edz_A 13 NPRECKLSKQEGQNYGFFLRIEKDT----DGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKS-G 86 (114)
T ss_dssp CCEEEEEECCTTCCCSCEEECCTTC----CSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHHT-C
T ss_pred CCEEEEEeCCCCCcccEEEEEecCC----CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-C
Confidence 5667777764 56788888764332 369999999999999999 999999999999999999999999999886 7
Q ss_pred CceeEEEEeccc
Q psy6405 206 GTIQDIKALGYD 217 (548)
Q Consensus 206 ~~V~LlV~RilD 217 (548)
..+.+.+.|...
T Consensus 87 ~~v~l~v~R~~~ 98 (114)
T 2edz_A 87 NSVTLLVLDGDS 98 (114)
T ss_dssp SEEEEEEECHHH
T ss_pred CEEEEEEEECCc
Confidence 889999988654
No 302
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.69 E-value=9.3e-08 Score=82.16 Aligned_cols=82 Identities=30% Similarity=0.375 Sum_probs=64.1
Q ss_pred CeEEEEEecCc---ceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 128 PVEITLIKDGA---GLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 128 ~VtVtV~RdGk---gLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
...|.+.|... ++||++...... +..+++|..|.++|||+++| |+.||+|++|||.++.++++.++.+++++
T Consensus 7 ~~~v~i~k~~~~~~~~Gf~v~~~~~~--~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~-- 81 (94)
T 3kzd_A 7 THSIHIEKSDTAADTYGFSLSSVEED--GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ-- 81 (94)
T ss_dssp EEEEEEEC------CCSEEEEEECSS--SSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHS--
T ss_pred eeEEEEEeCCCCcCCcCEEEEecCCC--CcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC--
Confidence 35677777653 699999764322 22469999999999999999 99999999999999999999999998874
Q ss_pred CCceeEEEEec
Q psy6405 205 DGTIQDIKALG 215 (548)
Q Consensus 205 g~~V~LlV~Ri 215 (548)
..+.+++...
T Consensus 82 -~~l~ltV~~~ 91 (94)
T 3kzd_A 82 -PSLGLLVRTY 91 (94)
T ss_dssp -SEEEEEEEEC
T ss_pred -CeEEEEEEec
Confidence 4567776653
No 303
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.68 E-value=9.3e-09 Score=89.98 Aligned_cols=80 Identities=30% Similarity=0.406 Sum_probs=63.3
Q ss_pred CCeEEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhh--CC
Q psy6405 49 SEVSVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILK--RG 126 (548)
Q Consensus 49 ~d~~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk--~g 126 (548)
..+++|.+.+. ..+|||.+.+. .+++|..|.++|||+++| |++||+|++|||+++..++..+++..+. .+
T Consensus 14 ~~~r~v~l~~~--~~~~G~~l~~~-----~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~ 85 (111)
T 1vae_A 14 SPPRGIHFTVE--EGDLGFTLRGN-----TPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGG 85 (111)
T ss_dssp CCCCCCCEECC--SSCCSCCEESS-----SSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTTT
T ss_pred CCCeEEEEEcC--CCcccEEEeCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 44577888886 68999998753 368999999999999999 9999999999999999766666554443 34
Q ss_pred CCeEEEEEec
Q psy6405 127 PPVEITLIKD 136 (548)
Q Consensus 127 ~~VtVtV~Rd 136 (548)
..+.|+|.|.
T Consensus 86 ~~v~l~V~~~ 95 (111)
T 1vae_A 86 EEVEMKVVSL 95 (111)
T ss_dssp SEECEEEECE
T ss_pred ceEEEEEEec
Confidence 4578888763
No 304
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.68 E-value=5.7e-08 Score=82.33 Aligned_cols=86 Identities=29% Similarity=0.412 Sum_probs=67.1
Q ss_pred CCCeEEEEEe--cCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc
Q psy6405 126 GPPVEITLIK--DGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL 203 (548)
Q Consensus 126 g~~VtVtV~R--dGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~ 203 (548)
.....+++.| ...++||++....... .+++|..|.++|||+++| |++||+|++|||+++.++++.+++..++.
T Consensus 7 ~~~~~v~l~~~~~~~~lG~~~~~~~~~~---~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~- 81 (101)
T 1uez_A 7 GEVRLVSLRRAKAHEGLGFSIRGGSEHG---VGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKG- 81 (101)
T ss_dssp CCCEEECCCCCCTTTCSSEEEEECTTTT---CCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSS-
T ss_pred CccEEEEEEECCCCCcccEEEeCCCCCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcC-
Confidence 3446676766 3467999998765322 369999999999999999 99999999999999999998666555543
Q ss_pred CCCceeEEEEeccc
Q psy6405 204 NDGTIQDIKALGYD 217 (548)
Q Consensus 204 ~g~~V~LlV~RilD 217 (548)
+..+.+.+.|...
T Consensus 82 -~~~v~l~v~R~g~ 94 (101)
T 1uez_A 82 -SKKLVLSVYSAGR 94 (101)
T ss_dssp -SSSCCEEECCCCC
T ss_pred -CCeEEEEEEECCc
Confidence 4578888877543
No 305
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.68 E-value=1.7e-08 Score=90.82 Aligned_cols=83 Identities=20% Similarity=0.316 Sum_probs=71.9
Q ss_pred CCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc-CC
Q psy6405 127 PPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL-ND 205 (548)
Q Consensus 127 ~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~-~g 205 (548)
..+.+.+.+...++||++.... .+++|..|.++|||+++|+|++||+|++|||.++.+.++.+++++|+.. .+
T Consensus 27 ~~~~~~l~k~~~glG~~i~~~~------~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G 100 (126)
T 1wif_A 27 KVIQTKLTVGNLGLGLVVIQNG------PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIG 100 (126)
T ss_dssp CEEEEEEECCTTCCCCCEEEET------TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSS
T ss_pred ceEEEEEecCCceEeEEEEcCC------CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Confidence 4467778888889999887532 2488999999999999999999999999999999988999999999984 47
Q ss_pred CceeEEEEec
Q psy6405 206 GTIQDIKALG 215 (548)
Q Consensus 206 ~~V~LlV~Ri 215 (548)
..+.+.+.|.
T Consensus 101 ~~v~l~V~R~ 110 (126)
T 1wif_A 101 TVLQIKAYRG 110 (126)
T ss_dssp CEEEEEEESS
T ss_pred CEEEEEEEEC
Confidence 7899999886
No 306
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.67 E-value=3.9e-08 Score=98.78 Aligned_cols=89 Identities=28% Similarity=0.420 Sum_probs=76.3
Q ss_pred CCCeEEEEEec-CcceeEEEecCCCCCCCCCCeEEEEeccCChhhh-cCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc
Q psy6405 126 GPPVEITLIKD-GAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEK-NGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL 203 (548)
Q Consensus 126 g~~VtVtV~Rd-GkgLGfSItgg~~s~lG~~gI~VssV~pgSpAek-aGrLq~GDrILaVNGvsV~~~t~~EavelLrs~ 203 (548)
.....|+|.|. +.++||+|.++.+.. .+++|..|.++|||++ +| |++||+|++|||+++.++++.+++.+++..
T Consensus 76 ~~~r~V~L~k~~~~glGf~I~gg~d~~---~gi~V~~V~~gspA~~~aG-L~~GD~Il~VNG~~v~~~t~~e~v~~l~~~ 151 (263)
T 1z87_A 76 LQRRRVTVRKADAGGLGISIKGGRENK---MPILISKIFKGLAADQTEA-LFVGDAILSVNGEDLSSATHDEAVQALKKT 151 (263)
T ss_dssp CSSEEECCCTTTTCCCCCEEEEETTTT---EEEEEEECCTTSHHHHCTT-CCSSCEEEEESSCBCTTSCHHHHHHHHHHC
T ss_pred CccEEEEEEeCCCCCEeEEEeeccCCC---CCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCcCHHHHHHHHhcC
Confidence 35678888886 588999999876432 3699999999999999 57 999999999999999999999999999997
Q ss_pred CCCceeEEEEeccccC
Q psy6405 204 NDGTIQDIKALGYDLN 219 (548)
Q Consensus 204 ~g~~V~LlV~RilDLr 219 (548)
+..+.++|.|..+..
T Consensus 152 -g~~V~L~V~R~~~~~ 166 (263)
T 1z87_A 152 -GKEVVLEVKYMKEVS 166 (263)
T ss_dssp -CSCCCEEEECCSSSS
T ss_pred -CCeEEEEEEeCcccc
Confidence 678999999976543
No 307
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.67 E-value=4.3e-08 Score=92.77 Aligned_cols=85 Identities=27% Similarity=0.363 Sum_probs=72.7
Q ss_pred CCeEEEEEec-CcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 127 PPVEITLIKD-GAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 127 ~~VtVtV~Rd-GkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
....|++.|. +.++||++.++.... .+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+++. +
T Consensus 84 ~~~~v~l~k~~~~~lG~~i~~~~~~~---~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~--~ 157 (192)
T 3k1r_A 84 KLKEVRLDRLHPEGLGLSVRGGLEFG---CGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT--E 157 (192)
T ss_dssp SCEEEEEETTSTTCCCEEEEEEGGGT---EEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS--S
T ss_pred ceEEEEEEeCCCCceeEEEEcccccC---CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC--C
Confidence 4467888886 678999998654321 368999999999999999 99999999999999999999999999987 6
Q ss_pred CceeEEEEeccc
Q psy6405 206 GTIQDIKALGYD 217 (548)
Q Consensus 206 ~~V~LlV~RilD 217 (548)
..+.+.+.|...
T Consensus 158 ~~v~l~v~r~g~ 169 (192)
T 3k1r_A 158 KTVSIKVRHIGL 169 (192)
T ss_dssp SEEEEEEEECCE
T ss_pred CeEEEEEEECCc
Confidence 789999998765
No 308
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.67 E-value=9.1e-08 Score=81.62 Aligned_cols=84 Identities=19% Similarity=0.217 Sum_probs=66.5
Q ss_pred CCeEEEEEec-CcceeEEEecCCCC----CCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHH
Q psy6405 127 PPVEITLIKD-GAGLGFSLEGGKDS----PFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLK 201 (548)
Q Consensus 127 ~~VtVtV~Rd-GkgLGfSItgg~~s----~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLr 201 (548)
.+..+++.|. +.++||+|...... .....+++|..|.++|||+++| |++||+|++|||+++.++++.++.++++
T Consensus 15 ~~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~ 93 (104)
T 2z17_A 15 QRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIR 93 (104)
T ss_dssp CCCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHH
T ss_pred cceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHH
Confidence 3466777775 56799999873211 1112479999999999999999 9999999999999999999999999999
Q ss_pred HcCCCceeEEE
Q psy6405 202 KLNDGTIQDIK 212 (548)
Q Consensus 202 s~~g~~V~LlV 212 (548)
...+ .+.+++
T Consensus 94 ~~~~-~v~l~v 103 (104)
T 2z17_A 94 SSGN-LLTIET 103 (104)
T ss_dssp HTTT-EEEEEC
T ss_pred hCCC-cEEEEE
Confidence 8743 666543
No 309
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.66 E-value=2.1e-08 Score=88.84 Aligned_cols=89 Identities=26% Similarity=0.307 Sum_probs=72.4
Q ss_pred CCCeEEEEEecCcceeEEEecCCCC----------------CC---------CCCCeEEEEeccCChhhhcCCCCCCCEE
Q psy6405 126 GPPVEITLIKDGAGLGFSLEGGKDS----------------PF---------GDQPLTVKKIFTGGCAEKNGQLKAGDEI 180 (548)
Q Consensus 126 g~~VtVtV~RdGkgLGfSItgg~~s----------------~l---------G~~gI~VssV~pgSpAekaGrLq~GDrI 180 (548)
..+..|++.|...++||+|.+.... .. ...+++|..|.++|||+++| |++||+|
T Consensus 7 ~~~r~v~l~r~~~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I 85 (126)
T 2yuy_A 7 GGPKTVTLKRTSQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDRI 85 (126)
T ss_dssp SSCCCEEEECCSSSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCCC
T ss_pred CCCEEEEEEECCCCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCEE
Confidence 3456788999889999999752100 00 11368999999999999999 9999999
Q ss_pred EEECCEEcCCCCHHHHHHHHHHcCCCceeEEEEecc
Q psy6405 181 LTINNVPVTEMSRIEAWSLLKKLNDGTIQDIKALGY 216 (548)
Q Consensus 181 LaVNGvsV~~~t~~EavelLrs~~g~~V~LlV~Ril 216 (548)
++|||+++.++++.+++++|+.. +..+.+.+.|..
T Consensus 86 ~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~~ 120 (126)
T 2yuy_A 86 IKVNGESVIGKTYSQVIALIQNS-DTTLELSVMPKD 120 (126)
T ss_dssp CEETTEECSSCCHHHHHHHHHTC-TTEEEEECCCCC
T ss_pred EEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEECC
Confidence 99999999999999999999986 778888887753
No 310
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.65 E-value=1.7e-07 Score=77.52 Aligned_cols=82 Identities=26% Similarity=0.433 Sum_probs=64.4
Q ss_pred CCeEEEEEecC--cceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 127 PPVEITLIKDG--AGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 127 ~~VtVtV~RdG--kgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
.++.+++.+.. ..+|+.+. .+++|..|.++|+|+++|+|+.||+|++|||.++.++++.++.++++...
T Consensus 2 ~~~~v~~~~~~~~~~~g~~~~---------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 72 (92)
T 3cyy_A 2 KPTKVTLVKSAKNEEYGLRLA---------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSK 72 (92)
T ss_dssp CCEEEEEECSSTTSCCCEEEE---------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTT
T ss_pred CcEEEEEEeCCCCCCCCEEEe---------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45666666543 45777765 14899999999999999989999999999999999889999999998864
Q ss_pred CCceeEEEEecccc
Q psy6405 205 DGTIQDIKALGYDL 218 (548)
Q Consensus 205 g~~V~LlV~RilDL 218 (548)
..+.+.+.|....
T Consensus 73 -~~v~l~v~r~g~~ 85 (92)
T 3cyy_A 73 -GKLKMVVQRDERA 85 (92)
T ss_dssp -TEEEEEEEC----
T ss_pred -CcEEEEEEeCCce
Confidence 4888888876543
No 311
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.65 E-value=2.9e-08 Score=84.71 Aligned_cols=86 Identities=28% Similarity=0.341 Sum_probs=71.5
Q ss_pred CCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 126 GPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 126 g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
+..+++++ +....+||++..+.+.. .+++|..|.++|||+++| |++||+|++|||+++.++++.++.++++.. +
T Consensus 4 g~~~~v~~-~~~~~lG~~l~~g~~~~---~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g 77 (103)
T 1v5l_A 4 GSSGNVVL-PGPAPWGFRLSGGIDFN---QPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAA-S 77 (103)
T ss_dssp CCCBCCEE-ESSSCCSBCCEEETTTT---EEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTC-C
T ss_pred CCEEEEEE-cCCCCcCEEEeccccCC---CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC-C
Confidence 55566655 45678999998665331 258899999999999999 999999999999999999899999999887 7
Q ss_pred CceeEEEEeccc
Q psy6405 206 GTIQDIKALGYD 217 (548)
Q Consensus 206 ~~V~LlV~RilD 217 (548)
..+.+.+.|...
T Consensus 78 ~~v~l~v~R~g~ 89 (103)
T 1v5l_A 78 YQLCLKIDRAET 89 (103)
T ss_dssp SEEECEECCCTT
T ss_pred CeEEEEEEECCe
Confidence 889999988755
No 312
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.64 E-value=6.7e-08 Score=84.34 Aligned_cols=76 Identities=24% Similarity=0.334 Sum_probs=57.2
Q ss_pred EEEEEeeCCCCCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeecc--CccHHHH-HHHh-hCCC
Q psy6405 52 SVVVLHRDLPGNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMK--GLTHKES-LAIL-KRGP 127 (548)
Q Consensus 52 ~tV~L~Kd~~~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~--~~s~~~a-V~~l-k~g~ 127 (548)
..+.+.+. ..++||.+... ..+++|..|.++|||+++| |++||+|++|||.++. .|+.... +... ..+.
T Consensus 19 ~~l~l~~~--~~g~G~~l~~~----~~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~ 91 (101)
T 3qik_A 19 KRLLILPQ--EEDYGFDIEEK----NKAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRR 91 (101)
T ss_dssp EEEEECCC--SSSSSEEEEEE----TTEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTC
T ss_pred CeEEEEeC--CCcccEEEEcc----CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCC
Confidence 45566665 57899998853 3478999999999999999 9999999999999986 4444332 2222 3578
Q ss_pred CeEEEEE
Q psy6405 128 PVEITLI 134 (548)
Q Consensus 128 ~VtVtV~ 134 (548)
++.+.|.
T Consensus 92 ~v~LLV~ 98 (101)
T 3qik_A 92 PLRLLVA 98 (101)
T ss_dssp CEEEEEE
T ss_pred eEEEEEe
Confidence 8887775
No 313
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.64 E-value=8.7e-08 Score=81.68 Aligned_cols=69 Identities=22% Similarity=0.218 Sum_probs=57.3
Q ss_pred CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHH-HHHhhCCCCeEEEEEecCcceeEEEecC
Q psy6405 77 SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKES-LAILKRGPPVEITLIKDGAGLGFSLEGG 147 (548)
Q Consensus 77 ~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~a-V~~lk~g~~VtVtV~RdGkgLGfSItgg 147 (548)
..+++|..|.++|||++ | |++||+|++|||+++.++..... +.....+..+.|+|.|+++...++++..
T Consensus 6 ~~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~ 75 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHGDKNEQADIKLT 75 (100)
T ss_dssp CCCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCSSHHHHHHHHHTSCTTCEEEEEEEETTEEEEEEEECE
T ss_pred CCCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEEEe
Confidence 46899999999999995 9 99999999999999999876654 3334467889999999988777777643
No 314
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.64 E-value=6.3e-08 Score=85.48 Aligned_cols=88 Identities=28% Similarity=0.474 Sum_probs=74.4
Q ss_pred CCeEEEEEecC-cceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCC-CCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 127 PPVEITLIKDG-AGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQL-KAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 127 ~~VtVtV~RdG-kgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrL-q~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
....+++.+.. .++|+++...... .+++|..|.++|||+++| | +.||+|++|||.++.++++.++.++++...
T Consensus 8 ~~~~v~l~~~~~~glG~~~~~~~~~----~~~~V~~V~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 82 (127)
T 1b8q_A 8 NVISVRLFKRKVGGLGFLVKERVSK----PPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRGIA 82 (127)
T ss_dssp CSEEEEEECTTTSCCSCCEEECTTS----SCEEECCCSSSSSHHHHS-SCCTTTCCCEETTEECSSSCHHHHHHHHHSCC
T ss_pred ceEEEEEEeCCCCcEeEEEEecCCC----CCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 45678887764 7899999876532 369999999999999999 7 999999999999999999999999999876
Q ss_pred CCceeEEEEeccccC
Q psy6405 205 DGTIQDIKALGYDLN 219 (548)
Q Consensus 205 g~~V~LlV~RilDLr 219 (548)
+..+.+.+.|.....
T Consensus 83 g~~v~l~v~R~g~~~ 97 (127)
T 1b8q_A 83 SETHVVLILRGPEGF 97 (127)
T ss_dssp SSCEEEEEECCCCSE
T ss_pred CCeEEEEEEeCCceE
Confidence 789999999876543
No 315
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.62 E-value=4.8e-08 Score=81.12 Aligned_cols=80 Identities=16% Similarity=0.183 Sum_probs=59.2
Q ss_pred ceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHH-HHHHhhCCCCeEEEEEecCcceeE
Q psy6405 64 SVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKE-SLAILKRGPPVEITLIKDGAGLGF 142 (548)
Q Consensus 64 GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~-aV~~lk~g~~VtVtV~RdGkgLGf 142 (548)
.+|+......+. -.++.|..+.|+|||+++| |++||+|++|||+++.+|.... .+.....+..+.++|.|++..+.+
T Consensus 6 ~~~~~p~~~~g~-~~G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g~~~~~ 83 (87)
T 2i6v_A 6 YVRLSQVKRDDK-VLGYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQHDV 83 (87)
T ss_dssp TEEEEEEEETTE-EEEEEEEECSCHHHHHHTT-CCTTCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEEEEETTEEEEE
T ss_pred ccceEEEeeCCe-EEEEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEE
Confidence 456555422111 1256778888888999999 9999999999999999997665 344455688899999998876666
Q ss_pred EEe
Q psy6405 143 SLE 145 (548)
Q Consensus 143 SIt 145 (548)
+++
T Consensus 84 ~v~ 86 (87)
T 2i6v_A 84 YIQ 86 (87)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 316
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.62 E-value=1e-07 Score=85.67 Aligned_cols=70 Identities=27% Similarity=0.319 Sum_probs=59.5
Q ss_pred CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHH-HHHhhCCCCeEEEEEecCcceeEEEecCC
Q psy6405 77 SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKES-LAILKRGPPVEITLIKDGAGLGFSLEGGK 148 (548)
Q Consensus 77 ~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~a-V~~lk~g~~VtVtV~RdGkgLGfSItgg~ 148 (548)
..+++|..|.++|||+ +| |++||+|++|||+++.++..... +....++..+.++|.|+++.+.++++...
T Consensus 56 ~~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~ 126 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYRNGKEETTSIKLNK 126 (134)
T ss_dssp CSCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECCCHHHHHHHHHHSSTTCEEEEEEEETTEEEEEEEECCC
T ss_pred CCCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEEEcc
Confidence 3579999999999999 99 99999999999999999876653 33344688999999999988888887654
No 317
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.62 E-value=3.4e-08 Score=83.52 Aligned_cols=79 Identities=28% Similarity=0.420 Sum_probs=67.0
Q ss_pred CeEEEEEecC--cceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 128 PVEITLIKDG--AGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 128 ~VtVtV~RdG--kgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
+++|++.|.. .++||.+.+. .+++|..|.++|||+ +| |++||+|++|||.++.++++.+++.+++.. +
T Consensus 9 ~~~v~l~~~~~~~~~G~~l~~~-------~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~-g 78 (96)
T 2edv_A 9 RHTVKIDKDTLLQDYGFHISES-------LPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILREA-E 78 (96)
T ss_dssp EEEEEECCCSSSCSCSBCCCSS-------SSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHHC-S
T ss_pred cEEEEEEECCCCCcccEEEecC-------CCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-C
Confidence 3667777766 4688888752 368999999999996 78 999999999999999999999999999884 7
Q ss_pred CceeEEEEecc
Q psy6405 206 GTIQDIKALGY 216 (548)
Q Consensus 206 ~~V~LlV~Ril 216 (548)
..+.+++.|..
T Consensus 79 ~~v~l~v~R~~ 89 (96)
T 2edv_A 79 DSLSITVVRCT 89 (96)
T ss_dssp SCEEEEEEECC
T ss_pred CeEEEEEEECC
Confidence 88999998854
No 318
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.61 E-value=1.7e-07 Score=77.44 Aligned_cols=80 Identities=21% Similarity=0.210 Sum_probs=63.1
Q ss_pred eEEEEEecC-c--ceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc-C
Q psy6405 129 VEITLIKDG-A--GLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL-N 204 (548)
Q Consensus 129 VtVtV~RdG-k--gLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~-~ 204 (548)
..+.+.+.. . .+|+++.... .+++|..|.++|||+++| |++||+|++|||.++.+.+..++.++++.. .
T Consensus 5 ~~~~~~~~~~~~~~lG~~~~~~~------~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 77 (90)
T 2eaq_A 5 MRISINQTPGKSLDFGFTIKWDI------PGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQE 77 (90)
T ss_dssp EEEEEECCTTCSSCCSEEEEEET------TEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHHH
T ss_pred eEEEEEecCCCCCcccEEEEecC------CCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcCC
Confidence 345555433 2 5888886432 258999999999999999 999999999999999777788999999863 4
Q ss_pred CCceeEEEEec
Q psy6405 205 DGTIQDIKALG 215 (548)
Q Consensus 205 g~~V~LlV~Ri 215 (548)
+..+.+.+.|.
T Consensus 78 g~~v~l~v~R~ 88 (90)
T 2eaq_A 78 TGHLVMDVRRY 88 (90)
T ss_dssp HTEEEEEEEEE
T ss_pred CCEEEEEEEeC
Confidence 67888888875
No 319
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.60 E-value=1.7e-07 Score=81.01 Aligned_cols=84 Identities=20% Similarity=0.323 Sum_probs=68.7
Q ss_pred CCCeEEEEE-ecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 126 GPPVEITLI-KDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 126 g~~VtVtV~-RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
+.+.++++. +...++||++....... .+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++..
T Consensus 14 ~~~~~v~~~~~~~~~lG~~l~~~~~~~---~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~- 88 (114)
T 1x5n_A 14 NKEKKVFISLVGSRGLGCSISSGPIQK---PGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSS- 88 (114)
T ss_dssp CSSEEEEECCCSSCCCCEEEEECCSSS---CSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHC-
T ss_pred CCcEEEEEEEcCCCceeEEEeecCCCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC-
Confidence 445667775 45577999998764321 369999999999999999 999999999999999999987888888865
Q ss_pred CCceeEEEEec
Q psy6405 205 DGTIQDIKALG 215 (548)
Q Consensus 205 g~~V~LlV~Ri 215 (548)
..+.+.+.|.
T Consensus 89 -~~v~l~v~r~ 98 (114)
T 1x5n_A 89 -RSLTISIVAA 98 (114)
T ss_dssp -SSEEEEECSS
T ss_pred -CeEEEEEEcC
Confidence 4788888775
No 320
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.59 E-value=2e-07 Score=81.37 Aligned_cols=79 Identities=24% Similarity=0.324 Sum_probs=65.9
Q ss_pred eEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc--CCC
Q psy6405 129 VEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL--NDG 206 (548)
Q Consensus 129 VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~--~g~ 206 (548)
..+.+.+...++||.+.... .+..|.+|.++|||+++| |++||+|++|||.++...+.+++++.++.. .+.
T Consensus 19 ~~l~l~~~~~g~G~~l~~~~------~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~ 91 (101)
T 3qik_A 19 KRLLILPQEEDYGFDIEEKN------KAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRR 91 (101)
T ss_dssp EEEEECCCSSSSSEEEEEET------TEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTC
T ss_pred CeEEEEeCCCcccEEEEccC------CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCC
Confidence 45667777788999987532 247899999999999999 999999999999999877788999999884 577
Q ss_pred ceeEEEEe
Q psy6405 207 TIQDIKAL 214 (548)
Q Consensus 207 ~V~LlV~R 214 (548)
.+.++|+-
T Consensus 92 ~v~LLV~~ 99 (101)
T 3qik_A 92 PLRLLVAT 99 (101)
T ss_dssp CEEEEEEC
T ss_pred eEEEEEec
Confidence 88888753
No 321
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.59 E-value=7.5e-08 Score=79.79 Aligned_cols=67 Identities=24% Similarity=0.406 Sum_probs=55.0
Q ss_pred CeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhCCCCeEEEEEecCcceeEEEec
Q psy6405 79 EITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKRGPPVEITLIKDGAGLGFSLEG 146 (548)
Q Consensus 79 gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~g~~VtVtV~RdGkgLGfSItg 146 (548)
+++|..|.++|||+++| |++||+|++|||+++.++...........+..+.+++.|++..+.++++.
T Consensus 5 ~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R~g~~~~~~v~~ 71 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAG-LQAGDRIVXVDGQPLTQWVTFVMLVRDNPGXSLALEIERQGSPLSLTLIP 71 (91)
T ss_dssp -CBCSEECTTSHHHHTT-CCTTCEEEEETTEECCCHHHHHHHHHHCTTCCEEEEEEETTEEEEEEECC
T ss_pred CeEEEEECCCChHHhcC-CCCCCEEEEECCeEcCCHHHHHHHHhcCCCCeEEEEEEECCeEEEEEEEE
Confidence 45788999999999999 99999999999999999876654333346788999999988777777764
No 322
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.57 E-value=1e-07 Score=81.02 Aligned_cols=86 Identities=34% Similarity=0.451 Sum_probs=67.8
Q ss_pred CCCeEEEEEec-CcceeEEEecCCCCCCCCCCeEEEEeccCChhhhc-CCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc
Q psy6405 126 GPPVEITLIKD-GAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKN-GQLKAGDEILTINNVPVTEMSRIEAWSLLKKL 203 (548)
Q Consensus 126 g~~VtVtV~Rd-GkgLGfSItgg~~s~lG~~gI~VssV~pgSpAeka-GrLq~GDrILaVNGvsV~~~t~~EavelLrs~ 203 (548)
+....+++.+. ...+||++.++.... .+++|..|.++|||+++ | |++||+|++|||+++.++ +.+++.+++..
T Consensus 8 ~~~~~~~v~~~~~~~~G~~~~gg~~~~---~~v~V~~V~~~spA~~agG-L~~GD~I~~ing~~v~~~-~~~~~~~~~~~ 82 (100)
T 2edp_A 8 GSFQYVPVQLQGGAPWGFTLKGGLEHC---EPLTVSKIEDGGKAALSQK-MRTGDELVNINGTPLYGS-RQEALILIKGS 82 (100)
T ss_dssp CCCEEEEEECCSCSCCCCCEEEEGGGT---EEEEECCCCTTSHHHHHTS-CCTTCEEEEETTEECCSC-SHHHHHHHHTC
T ss_pred CCcEEEEEEECCCCCcCEEEeccCCCC---CCeEEEEECCCCHHHHcCC-CCCCCEEEEECCEEccch-HHHHHHHHHhC
Confidence 34455666553 357899997654321 25899999999999999 7 999999999999999997 77888888876
Q ss_pred CCCceeEEEEeccc
Q psy6405 204 NDGTIQDIKALGYD 217 (548)
Q Consensus 204 ~g~~V~LlV~RilD 217 (548)
+..+.+.+.|...
T Consensus 83 -~~~v~l~v~R~~~ 95 (100)
T 2edp_A 83 -FRILKLIVRRRNS 95 (100)
T ss_dssp -CSSCEEEEEECCC
T ss_pred -CCeEEEEEEeCCC
Confidence 6788899988643
No 323
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.56 E-value=9.5e-08 Score=80.77 Aligned_cols=68 Identities=28% Similarity=0.354 Sum_probs=57.2
Q ss_pred CCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHH-HHhhCCCCeEEEEEecCcceeEEEecC
Q psy6405 78 KEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESL-AILKRGPPVEITLIKDGAGLGFSLEGG 147 (548)
Q Consensus 78 ~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV-~~lk~g~~VtVtV~RdGkgLGfSItgg 147 (548)
.+++|..|.++|||++ | |++||+|++|||.++.++.....+ ....++..+.++|.|+++.+.++++..
T Consensus 5 ~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~ 73 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINTSEQIVSYVREKQAGDRVRVTFIRDRKQHEAELVLK 73 (94)
T ss_dssp CCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCCHHHHHHHHHHSCTTCCEEEEEEETTEEEEEEECCC
T ss_pred CcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEEEe
Confidence 4789999999999998 9 999999999999999988665533 333468899999999998888887654
No 324
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.56 E-value=2.5e-08 Score=84.28 Aligned_cols=68 Identities=21% Similarity=0.306 Sum_probs=55.6
Q ss_pred CeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHH-HhhCCCCeEEEEEecCcceeEEEecCC
Q psy6405 79 EITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLA-ILKRGPPVEITLIKDGAGLGFSLEGGK 148 (548)
Q Consensus 79 gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~-~lk~g~~VtVtV~RdGkgLGfSItgg~ 148 (548)
+++|..|.++|||++ | |++||+|++|||+++.++.....+. ...++.++.|+|.|+++.+.++++...
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~ 70 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQSAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQ 70 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSSHHHHHHHHSSCCSSCEECEEEESSSCEECCCEECCC
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCCHHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEEEec
Confidence 578889999999999 9 9999999999999999886554332 223678899999999988777776543
No 325
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.55 E-value=4.1e-07 Score=85.65 Aligned_cols=83 Identities=27% Similarity=0.416 Sum_probs=69.8
Q ss_pred eEEEEEe-cCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhc-CCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCC
Q psy6405 129 VEITLIK-DGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKN-GQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDG 206 (548)
Q Consensus 129 VtVtV~R-dGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAeka-GrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~ 206 (548)
..+++.| .+.++||++..+.... .+++|..|.++|||+++ | |++||+|++|||+++.++++.++..+++.. +.
T Consensus 9 ~~v~l~~~~~~~lG~~i~~~~~~~---~~~~V~~v~~~spA~~agg-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g~ 83 (200)
T 2qt5_A 9 TVVELMKKEGTTLGLTVSGGIDKD---GKPRVSNLRQGGIAARSDQ-LDVGDYIKAVNGINLAKFRHDEIISLLKNV-GE 83 (200)
T ss_dssp EEEEEECCTTCCCCEEEECCTTSS---SCSEEEEECTTSHHHHTTS-CCTTCEEEEETTEECTTSCHHHHHHHHHTC-CS
T ss_pred EEEEEEeCCCCCCCEEEecccCCC---CCeEEEEECCCChHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC-CC
Confidence 4566654 6678999998876542 35899999999999999 7 999999999999999999999999888876 66
Q ss_pred ceeEEEEecc
Q psy6405 207 TIQDIKALGY 216 (548)
Q Consensus 207 ~V~LlV~Ril 216 (548)
.+.+.+.|..
T Consensus 84 ~v~l~v~R~~ 93 (200)
T 2qt5_A 84 RVVLEVEYEL 93 (200)
T ss_dssp EEEEEEEEEC
T ss_pred eEEEEEeccC
Confidence 8888888754
No 326
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.55 E-value=2.9e-07 Score=86.70 Aligned_cols=91 Identities=24% Similarity=0.336 Sum_probs=75.0
Q ss_pred CCeEEEEEec-CcceeEEEecCCCCC-CCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 127 PPVEITLIKD-GAGLGFSLEGGKDSP-FGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 127 ~~VtVtV~Rd-GkgLGfSItgg~~s~-lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
..+.|++.|. ..++||++.++.... .+..+++|..|.++|||+++|+|+.||+|++|||.++.++++.++..+++...
T Consensus 6 ~~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 85 (196)
T 1p1d_A 6 ETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSS 85 (196)
T ss_dssp EEEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCC
T ss_pred EEEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 3467778776 488999999874322 12346899999999999999999999999999999999988889999998875
Q ss_pred -CCceeEEEEeccc
Q psy6405 205 -DGTIQDIKALGYD 217 (548)
Q Consensus 205 -g~~V~LlV~RilD 217 (548)
+..+.+.+.|...
T Consensus 86 ~g~~v~l~v~R~~~ 99 (196)
T 1p1d_A 86 ITSKVTLEIEFDVA 99 (196)
T ss_dssp SSSEEEEEEEECSC
T ss_pred CCCeEEEEEEecCC
Confidence 6788999988654
No 327
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.53 E-value=3.8e-07 Score=76.75 Aligned_cols=75 Identities=23% Similarity=0.374 Sum_probs=60.8
Q ss_pred CeEEEEEec--CcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 128 PVEITLIKD--GAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 128 ~VtVtV~Rd--GkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
...+++.+. ...+||++.. + +|..|.++|||+++| |+.||+|++|||.++.+.++.++.++++.. +
T Consensus 12 ~~~~~i~~~~~~~~lG~~~~~---------G-~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~-g 79 (90)
T 1y7n_A 12 VTTVLIRRPDLRYQLGFSVQN---------G-IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNA-V 79 (90)
T ss_dssp CEEEEEEESSTTSCCCEEEET---------T-EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHC-C
T ss_pred cceEEEEeCCCccccCeEecC---------C-EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-C
Confidence 345555553 3568888743 2 789999999999999 999999999999999999999999999975 6
Q ss_pred CceeEEEEe
Q psy6405 206 GTIQDIKAL 214 (548)
Q Consensus 206 ~~V~LlV~R 214 (548)
..+.+.+.+
T Consensus 80 ~~v~l~v~p 88 (90)
T 1y7n_A 80 GEIHMKTMP 88 (90)
T ss_dssp EEEEEEEEC
T ss_pred CeEEEEEEE
Confidence 677777654
No 328
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.52 E-value=2.9e-07 Score=79.45 Aligned_cols=67 Identities=24% Similarity=0.425 Sum_probs=56.1
Q ss_pred CCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhCCCCeEEEEEecCcceeEEEecC
Q psy6405 78 KEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKRGPPVEITLIKDGAGLGFSLEGG 147 (548)
Q Consensus 78 ~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~g~~VtVtV~RdGkgLGfSItgg 147 (548)
.+++|..|.++|||+++| |++||+|++|||+++.++..... .+..+..+.++|.|++..+.++++..
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~--~l~~~~~v~l~v~R~g~~~~~~v~~~ 101 (113)
T 2pzd_A 35 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQNAEDVYE--AVRTQSQLAVQIRRGRETLTLYVTPE 101 (113)
T ss_dssp SCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECCSHHHHHH--HHHHCSSEEEEEEETTEEEEEEECCE
T ss_pred CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCHHHHHH--HHhCCCeEEEEEEECCEEEEEEEEEe
Confidence 589999999999999999 99999999999999987754433 33347889999999888777777654
No 329
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.52 E-value=6.6e-08 Score=85.19 Aligned_cols=84 Identities=30% Similarity=0.349 Sum_probs=67.2
Q ss_pred CCeEEEEEecCc---ceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc
Q psy6405 127 PPVEITLIKDGA---GLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL 203 (548)
Q Consensus 127 ~~VtVtV~RdGk---gLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~ 203 (548)
....+.+.|.+. .+||+|...... +..+++|..|.++|||+++| |++||+|++|||.++.++++.++.++++.
T Consensus 15 ~~~~v~l~k~~~~~~~~G~~v~~~~~~--~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~- 90 (114)
T 2d8i_A 15 VTQSIHIEKSDTAADTYGFSLSSVEED--GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ- 90 (114)
T ss_dssp EEEEEEEECSCTTTCCCCCEEEEEEET--TEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHTS-
T ss_pred ceEEEEEEeCCCCccccCEEEEecCcC--CcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhC-
Confidence 346778888765 689998753221 11368999999999999999 99999999999999999988888888874
Q ss_pred CCCceeEEEEecc
Q psy6405 204 NDGTIQDIKALGY 216 (548)
Q Consensus 204 ~g~~V~LlV~Ril 216 (548)
..+.+++.|..
T Consensus 91 --~~v~l~v~R~p 101 (114)
T 2d8i_A 91 --PSLGLLVRTYP 101 (114)
T ss_dssp --SEEEEEEEECC
T ss_pred --CcEEEEEEECC
Confidence 37788887753
No 330
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.51 E-value=2.9e-07 Score=81.19 Aligned_cols=88 Identities=24% Similarity=0.295 Sum_probs=68.1
Q ss_pred EEEEecCc--ceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCce
Q psy6405 131 ITLIKDGA--GLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTI 208 (548)
Q Consensus 131 VtV~RdGk--gLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V 208 (548)
+.+.+.+. .+|+++....... ...+++|..|.++|||+++|+|++||+|++|||+++.+ +.++.++|+..++..+
T Consensus 23 ~~~~~~~~~~~lG~~~~~~~~~~-~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v 99 (124)
T 1wh1_A 23 VDLYRMNSQDKLGLTVCYRTDDE-DDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN--REEAVALLTSEENKNF 99 (124)
T ss_dssp BCCCCSSTTCCCCEEEECCCCCS-SCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCS--HHHHHHHHTCSSCCSC
T ss_pred EEEEecCCCCcccEEEEecCCCC-CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC--HHHHHHHHHhCCCCEE
Confidence 33444443 6888887654321 12479999999999999999999999999999999986 5589899988667889
Q ss_pred eEEEEeccccCCC
Q psy6405 209 QDIKALGYDLNSL 221 (548)
Q Consensus 209 ~LlV~RilDLr~~ 221 (548)
.+++.|.......
T Consensus 100 ~l~v~R~g~~~~~ 112 (124)
T 1wh1_A 100 SLLIARPELQLDE 112 (124)
T ss_dssp CEEEEECSSCCCC
T ss_pred EEEEEECCEEeec
Confidence 9999997654443
No 331
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.51 E-value=2.9e-07 Score=79.51 Aligned_cols=67 Identities=25% Similarity=0.464 Sum_probs=56.1
Q ss_pred CCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhCCCCeEEEEEecCcceeEEEec
Q psy6405 77 SKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKRGPPVEITLIKDGAGLGFSLEG 146 (548)
Q Consensus 77 ~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~g~~VtVtV~RdGkgLGfSItg 146 (548)
..+++|..|.++|||+++| |++||+|++|||+++.++...... +..+..+.++|.|++..+.++++.
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~--l~~g~~v~l~v~R~g~~~~~~v~~ 100 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLVDSSELQEA--VLTESPLLLEVRRGNDDLLFSIAP 100 (112)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSHHHHHHH--HHHCSSEEEEEEETTEEEEEEECC
T ss_pred CCCeEEEEECCCChHHHCC-CCCCCEEEEECCEECCCHHHHHHH--HhCCCeEEEEEEECCEEEEEEEEE
Confidence 3579999999999999999 999999999999999988655432 245888999999988777777654
No 332
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.50 E-value=3.3e-07 Score=77.66 Aligned_cols=66 Identities=14% Similarity=0.122 Sum_probs=52.3
Q ss_pred eEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHH-HHHhhCCCCeEEEEEecCc--ceeEEEec
Q psy6405 80 ITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKES-LAILKRGPPVEITLIKDGA--GLGFSLEG 146 (548)
Q Consensus 80 VvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~a-V~~lk~g~~VtVtV~RdGk--gLGfSItg 146 (548)
.+|..|.++|||+++| |++||+|++|||++|.+|..... +.....+..+.++|.|++. ...++|..
T Consensus 4 p~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~d~~~~l~~~~~~~~v~l~v~R~g~~~~~~~~l~l 72 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQ-IAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDL 72 (95)
T ss_dssp CBEEEECTTSHHHHTT-CCTTCEEEEETTEECSSHHHHHHHHHHTTTCSEEEEEEECTTCCCCEEEEEEC
T ss_pred CEEEeeCCCCHHHHcC-CCCCCEEEEECCEECCCHHHHHHHHHHhcCCCcEEEEEEECCCCceEEEEEEc
Confidence 4788999999999999 99999999999999999977654 3333334679999999874 34555544
No 333
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.50 E-value=2.4e-07 Score=79.64 Aligned_cols=66 Identities=17% Similarity=0.215 Sum_probs=53.6
Q ss_pred CeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHH-HHHHhhCCCCeEEEEEecCcceeEEEe
Q psy6405 79 EITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKE-SLAILKRGPPVEITLIKDGAGLGFSLE 145 (548)
Q Consensus 79 gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~-aV~~lk~g~~VtVtV~RdGkgLGfSIt 145 (548)
++.|..+.|+|||+++| |++||+|++|||+++.+|.... .+....++..+.++|.|++..+.++++
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~ 104 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQHDVYIQ 104 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTSTTHHHHHHHHHTTCSEEEEEEEETTEEEEEEEE
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCHHHHHHHHHhcCCCCeEEEEEEECCEEEEEEEe
Confidence 45667778888889999 9999999999999999998766 344456788899999998876666553
No 334
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.48 E-value=4.1e-07 Score=95.74 Aligned_cols=84 Identities=29% Similarity=0.449 Sum_probs=70.6
Q ss_pred CeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHH-cCCC
Q psy6405 128 PVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKK-LNDG 206 (548)
Q Consensus 128 ~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs-~~g~ 206 (548)
.+.+...+.+.++|+++.++... +++|..|.++|||+++| |++||+|++|||.++.++++.+++.+++. ..+.
T Consensus 9 ~~~~v~~~k~~~lG~~i~gg~~~-----gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~ 82 (391)
T 3tsz_A 9 SMKLVKFRKGDSVGLRLAGGNDV-----GIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGE 82 (391)
T ss_dssp CEEEEEEECCSSCCEEEEEETTT-----EEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTS
T ss_pred CcEEEEeecCCceeEEEEecCCC-----CEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCC
Confidence 34444444456799999876533 69999999999999999 99999999999999999999999999997 4677
Q ss_pred ceeEEEEeccc
Q psy6405 207 TIQDIKALGYD 217 (548)
Q Consensus 207 ~V~LlV~RilD 217 (548)
.+.+++.|..+
T Consensus 83 ~v~l~v~r~~~ 93 (391)
T 3tsz_A 83 EVTILAQKKKD 93 (391)
T ss_dssp EEEEEEEECHH
T ss_pred eEEEEEeeCCc
Confidence 89999998754
No 335
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.48 E-value=5.7e-07 Score=84.07 Aligned_cols=74 Identities=34% Similarity=0.509 Sum_probs=63.8
Q ss_pred cceeEEEecCCCC---CC--CCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCceeEEE
Q psy6405 138 AGLGFSLEGGKDS---PF--GDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTIQDIK 212 (548)
Q Consensus 138 kgLGfSItgg~~s---~l--G~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V~LlV 212 (548)
.++||+|.++... ++ +..+++|..|.++|||++ | |++||+|++|||+++.++++.+++.+++.. +..+.+.+
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v 78 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTF-QNTVELII 78 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHC-CSEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEE
Confidence 4689999987532 11 335899999999999999 8 999999999999999999999999999987 45889999
Q ss_pred Ee
Q psy6405 213 AL 214 (548)
Q Consensus 213 ~R 214 (548)
.|
T Consensus 79 ~r 80 (195)
T 2qbw_A 79 VR 80 (195)
T ss_dssp EE
T ss_pred EE
Confidence 88
No 336
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.84 E-value=2e-08 Score=87.89 Aligned_cols=82 Identities=32% Similarity=0.543 Sum_probs=65.4
Q ss_pred CCeEEEEEec-CcceeEEEecCCCCCCCCCCeEEEEeccCChhhh-cCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 127 PPVEITLIKD-GAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEK-NGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 127 ~~VtVtV~Rd-GkgLGfSItgg~~s~lG~~gI~VssV~pgSpAek-aGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
....+++.|. +.++||++.++.... .+++|..|.++|||++ +| |++||+|++|||.++.+.++.+++.+++..
T Consensus 27 ~~~~v~l~k~~~~glG~~l~~g~~~~---~gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~~v~~~~~~~~~~~l~~~- 101 (112)
T 2lob_A 27 GIRKVLLLKEDHEGLGISITGGKEHG---VPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQ- 101 (112)
Confidence 3456667664 478999998765432 3689999999999999 78 999999999999999988888999999876
Q ss_pred CCceeEEEE
Q psy6405 205 DGTIQDIKA 213 (548)
Q Consensus 205 g~~V~LlV~ 213 (548)
+..+.+.+.
T Consensus 102 ~~~v~l~V~ 110 (112)
T 2lob_A 102 RGEIEFEVV 110 (112)
Confidence 344666554
No 337
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.45 E-value=3e-07 Score=89.60 Aligned_cols=87 Identities=22% Similarity=0.227 Sum_probs=74.1
Q ss_pred CCCCeEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcC
Q psy6405 125 RGPPVEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLN 204 (548)
Q Consensus 125 ~g~~VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~ 204 (548)
...+..|++.|...++||.+...... .+++|..|.++|||+++| |+.||+|++|||+.|.++++.+++++++..
T Consensus 7 ~~~~r~v~l~k~~~glG~~l~~~~~~----~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~- 80 (216)
T 2krg_A 7 MLRPRLCTMKKGPSGYGFNLHSDKSK----PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAG- 80 (216)
T ss_dssp TCCCEEEEEECCSSSSCEEECCCSSS----CSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHH-
T ss_pred ccceEEEEEEeCCCCceEEEEecCCC----CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc-
Confidence 34567888999888999999876532 368999999999999999 999999999999999988888999999887
Q ss_pred CCce-eEEEEeccc
Q psy6405 205 DGTI-QDIKALGYD 217 (548)
Q Consensus 205 g~~V-~LlV~RilD 217 (548)
+..+ .+++.|...
T Consensus 81 g~~v~~l~V~R~g~ 94 (216)
T 2krg_A 81 GDETKLLVVDRETD 94 (216)
T ss_dssp CSEEEEEECCHHHH
T ss_pred CCeEEEEEEEECCE
Confidence 6677 777777554
No 338
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.44 E-value=9.9e-07 Score=81.08 Aligned_cols=82 Identities=26% Similarity=0.280 Sum_probs=67.8
Q ss_pred CCeEEEEEec-CcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC
Q psy6405 127 PPVEITLIKD-GAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND 205 (548)
Q Consensus 127 ~~VtVtV~Rd-GkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g 205 (548)
.+..|++.|. ...+|+++.... .+++|..|.++|||+++| |+.||+|++|||.++.++++..+..+++...+
T Consensus 4 ~~r~v~l~k~~~~~lG~~~~~~~------~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~ 76 (166)
T 1w9e_A 4 DPREVILCKDQDGKIGLRLKSID------NGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAFG 76 (166)
T ss_dssp CCEEEEEECCTTSCCSEEEEEET------TEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred CCEEEEEEeCCCCcEeEEEEeCC------CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 4567888874 357899987643 359999999999999999 99999999999999999997667788887767
Q ss_pred CceeEEEEec
Q psy6405 206 GTIQDIKALG 215 (548)
Q Consensus 206 ~~V~LlV~Ri 215 (548)
..+.+.+.+.
T Consensus 77 ~~v~l~vr~~ 86 (166)
T 1w9e_A 77 EKITMTIRDR 86 (166)
T ss_dssp SEEEEEEECC
T ss_pred CEEEEEEEcC
Confidence 7888888544
No 339
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.43 E-value=7.6e-07 Score=71.43 Aligned_cols=68 Identities=25% Similarity=0.419 Sum_probs=57.0
Q ss_pred cceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCceeEEEEec
Q psy6405 138 AGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTIQDIKALG 215 (548)
Q Consensus 138 kgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V~LlV~Ri 215 (548)
..+|+.+. .+++|..|.++|||+++|.|++||+|++|||.++.++++.++.++++... ..+.+.+.|.
T Consensus 13 ~~~g~~~~---------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~ 80 (81)
T 2rcz_A 13 EEYGLRLA---------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSK-GKLKMVVQRD 80 (81)
T ss_dssp CCCCEEEE---------EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTST-TEEEEEEEC-
T ss_pred CCCCEEEe---------CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCC-CeEEEEEEeC
Confidence 45666665 14899999999999999989999999999999999889999999998764 4778887663
No 340
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.42 E-value=5.7e-07 Score=91.31 Aligned_cols=83 Identities=16% Similarity=0.298 Sum_probs=65.5
Q ss_pred CCceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHH-HHhhCCCCeEEEEEe-cCcc
Q psy6405 62 GNSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESL-AILKRGPPVEITLIK-DGAG 139 (548)
Q Consensus 62 ~~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV-~~lk~g~~VtVtV~R-dGkg 139 (548)
...+|+.+.... ...+++|..|.++|||+++| |++||+|++|||+++.++.....+ ....++.++.|+|.| +++.
T Consensus 228 ~~~lGi~~~~~~--~~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~~g~~ 304 (324)
T 1y8t_A 228 HASLGVQVTNDK--DTLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGS 304 (324)
T ss_dssp CEECCEEEESCS--SSSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEECSSCCE
T ss_pred ccccceEeeecc--CCCceEEEEECCCChHHHcC-CCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCCCE
Confidence 345677665321 13579999999999999999 999999999999999998766543 333568889999999 8888
Q ss_pred eeEEEecC
Q psy6405 140 LGFSLEGG 147 (548)
Q Consensus 140 LGfSItgg 147 (548)
+.++++..
T Consensus 305 ~~~~v~~~ 312 (324)
T 1y8t_A 305 RTVQVTLG 312 (324)
T ss_dssp EEEEEECE
T ss_pred EEEEEEEc
Confidence 77777654
No 341
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.39 E-value=7.7e-07 Score=95.99 Aligned_cols=81 Identities=31% Similarity=0.446 Sum_probs=69.8
Q ss_pred eEEEEEecCcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc-CCCc
Q psy6405 129 VEITLIKDGAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL-NDGT 207 (548)
Q Consensus 129 VtVtV~RdGkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~-~g~~ 207 (548)
..|.+.+ +.++||++.++... +++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|+.. .+..
T Consensus 3 r~V~l~k-~~~lG~~i~gg~~~-----Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~ 75 (468)
T 3shw_A 3 KLVKFRK-GDSVGLRLAGGNDV-----GIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEE 75 (468)
T ss_dssp EEEEEEC-CSSCCEEEEEETTT-----EEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSE
T ss_pred eEEEEec-CCccceEEEccCcC-----CEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCE
Confidence 3455555 58899999876543 69999999999999999 999999999999999999999999999984 4778
Q ss_pred eeEEEEecc
Q psy6405 208 IQDIKALGY 216 (548)
Q Consensus 208 V~LlV~Ril 216 (548)
+.+.+.|..
T Consensus 76 v~L~V~r~g 84 (468)
T 3shw_A 76 VTILAQKKK 84 (468)
T ss_dssp EEEEEEECH
T ss_pred EEEEEEECC
Confidence 999998854
No 342
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.37 E-value=6e-07 Score=99.34 Aligned_cols=82 Identities=20% Similarity=0.248 Sum_probs=67.3
Q ss_pred CceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhCCCCeEEEEEecCcceeE
Q psy6405 63 NSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKRGPPVEITLIKDGAGLGF 142 (548)
Q Consensus 63 ~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~g~~VtVtV~RdGkgLGf 142 (548)
.++|+.+... .++++|..|.++|||+++| |++||+|++|||.+|.......++...++|+++.|+|.|+++...+
T Consensus 485 ~~lG~~~~~~----~~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~ 559 (597)
T 4fgm_A 485 VNFGAKYKAS----PQGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQATEQSVKRILERYIPGDTVTIHAFRRDELMTL 559 (597)
T ss_dssp CCCSEEEEEE----TTEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCTTTHHHHHTTCCTTCEEEEEEEETTEEEEE
T ss_pred cccceEEecc----CCeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECCHHHHHHHHHhcCCCCEEEEEEEECCEEEEE
Confidence 4789888743 2479999999999999999 9999999999999995334444555556789999999999998888
Q ss_pred EEecCCC
Q psy6405 143 SLEGGKD 149 (548)
Q Consensus 143 SItgg~~ 149 (548)
+|+....
T Consensus 560 ~v~l~~~ 566 (597)
T 4fgm_A 560 ELTWQEP 566 (597)
T ss_dssp EEECCCC
T ss_pred EEEecCC
Confidence 8887653
No 343
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.37 E-value=1.3e-06 Score=77.23 Aligned_cols=62 Identities=24% Similarity=0.265 Sum_probs=56.0
Q ss_pred CCeEEEEecc--CChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCceeEEEEecccc
Q psy6405 155 QPLTVKKIFT--GGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTIQDIKALGYDL 218 (548)
Q Consensus 155 ~gI~VssV~p--gSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V~LlV~RilDL 218 (548)
.+++|..|.+ ++||+++| |+.||+|++|||.++.++++.++.++++.. +..+.+.+.|....
T Consensus 44 ~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~~~-g~~v~l~v~R~g~~ 107 (118)
T 2yub_A 44 TTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIKQT-SQTLQLLIEHDPVP 107 (118)
T ss_dssp CEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHHCC-SSCEEEEEEECSSC
T ss_pred CcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHhC-CCEEEEEEEECCEE
Confidence 3689999999 99999999 999999999999999999888999999987 77899999886543
No 344
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.36 E-value=1.1e-06 Score=93.10 Aligned_cols=75 Identities=25% Similarity=0.370 Sum_probs=56.3
Q ss_pred CCceEEEEEeCCCCCC-CCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhCCCCeEEEEEecCcc
Q psy6405 62 GNSVGITLAGGSDYES-KEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKRGPPVEITLIKDGAG 139 (548)
Q Consensus 62 ~~GLGfsIagG~d~~~-~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~g~~VtVtV~RdGkg 139 (548)
..||||++....+... -.++|..|.++|||+++| |++||+|++|||++|.+++....+.. ++.+++|++.|.+..
T Consensus 73 ~~G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~~~~~l~~--~g~~v~l~v~R~g~~ 148 (403)
T 3k50_A 73 SYGFDYTLYKVLDNDTAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKVESELLQG--STRQLQIGVYKEVVG 148 (403)
T ss_dssp BCSEEEEEEECTTCSSCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTTGGGGTSC--SCEEEEEEEEEEEC-
T ss_pred ccceEEEEEEcCCCCcceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchhHHHHhhC--CCCEEEEEEEeCCcc
Confidence 5678888775432111 137899999999999999 99999999999999999863222222 577799999997764
No 345
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.33 E-value=5.6e-07 Score=94.39 Aligned_cols=91 Identities=21% Similarity=0.246 Sum_probs=72.7
Q ss_pred CCCeEEEEEec-CcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc-
Q psy6405 126 GPPVEITLIKD-GAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL- 203 (548)
Q Consensus 126 g~~VtVtV~Rd-GkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~- 203 (548)
.....|++.|. +.++||+|.+.... ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..
T Consensus 203 ~~~~~V~i~k~~ge~lG~~i~~~~~g-~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~ 281 (388)
T 3suz_A 203 ENCKELQLEKHKGEILGVVVVESGWG-SILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLK 281 (388)
T ss_dssp SCCEEEEECCCSSCCCCCCCBCC----CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCT
T ss_pred ccceEEEEECCCCCceeEEEEecCCC-CcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhcc
Confidence 34567888875 78899999874321 1123588999999999999999999999999999999999988999999887
Q ss_pred CCCceeEEEEeccc
Q psy6405 204 NDGTIQDIKALGYD 217 (548)
Q Consensus 204 ~g~~V~LlV~RilD 217 (548)
.+..+.+.+.|...
T Consensus 282 ~~~~v~l~v~r~~~ 295 (388)
T 3suz_A 282 NQTQVKLNIVSCPP 295 (388)
T ss_dssp TCSCEEEEEEECCS
T ss_pred CCCccccccccccc
Confidence 45568998888644
No 346
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.30 E-value=9.5e-07 Score=91.26 Aligned_cols=70 Identities=26% Similarity=0.480 Sum_probs=60.8
Q ss_pred CCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHH-HHHhhCCCCeEEEEEecCcceeEEEecCC
Q psy6405 78 KEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKES-LAILKRGPPVEITLIKDGAGLGFSLEGGK 148 (548)
Q Consensus 78 ~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~a-V~~lk~g~~VtVtV~RdGkgLGfSItgg~ 148 (548)
.+++|..|.++|||+++| |++||+|++|||++|.++.+... +....+++.+.|+|.|+++.+.++++.+.
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~ 333 (345)
T 3stj_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDT 333 (345)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEECEETTEECSCHHHHHHHHHTSCTTCEEEEEEEETTEEEEEEEECEE
T ss_pred ceEEEEEeccCChHHHcC-CCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEcc
Confidence 578999999999999999 99999999999999999877664 44445789999999999998888887643
No 347
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=98.28 E-value=8.6e-07 Score=91.25 Aligned_cols=69 Identities=23% Similarity=0.300 Sum_probs=59.6
Q ss_pred CCeEEEEEcCCChhhhcCCCCC-----------CCEEEEECCeeccCccHHHHH-HHhhCCCCeEEEEEecCcceeEEEe
Q psy6405 78 KEITVHKVISGTPADRDGRLQK-----------GDRILSINGKSMKGLTHKESL-AILKRGPPVEITLIKDGAGLGFSLE 145 (548)
Q Consensus 78 ~gVvVs~V~pGSPAaqAGrLq~-----------GDrILaINGv~V~~~s~~~aV-~~lk~g~~VtVtV~RdGkgLGfSIt 145 (548)
.+++|..|.++|||+++| |++ ||+|++|||++|.++.+.... ....++++++|+|.|+++.+.++++
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 329 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHKEKISVT 329 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSSHHHHHHHTTCCTTCEEEEEEECSSSEEEEEEE
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCHHHHHHHHHhCCCcCEEEEEEEECCEEEEEEEE
Confidence 589999999999999999 999 999999999999999776643 3445688999999999988887776
Q ss_pred cC
Q psy6405 146 GG 147 (548)
Q Consensus 146 gg 147 (548)
..
T Consensus 330 l~ 331 (348)
T 3qo6_A 330 LE 331 (348)
T ss_dssp CE
T ss_pred Ec
Confidence 53
No 348
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.24 E-value=1.8e-06 Score=87.61 Aligned_cols=69 Identities=22% Similarity=0.350 Sum_probs=59.1
Q ss_pred CCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHH-HHhhCCCCeEEEEEecCcceeEEEecC
Q psy6405 78 KEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESL-AILKRGPPVEITLIKDGAGLGFSLEGG 147 (548)
Q Consensus 78 ~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV-~~lk~g~~VtVtV~RdGkgLGfSItgg 147 (548)
.+++|..|.++|||+++| |++||+|++|||+++.++.....+ ....++.++.|+|.|+++.+.++++..
T Consensus 244 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~ 313 (318)
T 1te0_A 244 QGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQ 313 (318)
T ss_dssp CCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECCCHHHHHHHHHTSCTTCEEEEEEESSSCEEEEEEECE
T ss_pred CcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEc
Confidence 579999999999999999 999999999999999988766543 333578899999999998888887654
No 349
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.22 E-value=6.5e-06 Score=78.87 Aligned_cols=96 Identities=17% Similarity=0.150 Sum_probs=67.4
Q ss_pred CeEEEEEeeCC---CCCceEEEEEeCCC--CCCCCeEEEEEcCCChhhhcCCCCC-CCEEEEECCeeccCccHHHHHHHh
Q psy6405 50 EVSVVVLHRDL---PGNSVGITLAGGSD--YESKEITVHKVISGTPADRDGRLQK-GDRILSINGKSMKGLTHKESLAIL 123 (548)
Q Consensus 50 d~~tV~L~Kd~---~~~GLGfsIagG~d--~~~~gVvVs~V~pGSPAaqAGrLq~-GDrILaINGv~V~~~s~~~aV~~l 123 (548)
....+.+.... ....+|+++..-.. ....+++|..|.++|||+++| |++ ||+|++|||. +.++.....+...
T Consensus 79 ~~~~v~l~p~~~~~~~~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~~~~~l~~~l~~ 156 (209)
T 3rle_A 79 ELRETSVTPSNLWGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MNESEDLFSLIET 156 (209)
T ss_dssp CEEEEEECCCSSSSSSSSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CCSSSCHHHHHHH
T ss_pred eEEEEEEcccccccccCccceEEeecChhHccccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eCCHHHHHHHHHh
Confidence 34455553221 13468888763211 112578999999999999999 999 9999999998 8888766643333
Q ss_pred hCCCCeEEEEEecCcc--eeEEEecC
Q psy6405 124 KRGPPVEITLIKDGAG--LGFSLEGG 147 (548)
Q Consensus 124 k~g~~VtVtV~RdGkg--LGfSItgg 147 (548)
.++.++.++|.|.+.. +.+++++.
T Consensus 157 ~~g~~v~l~v~r~~~~~~~~v~l~p~ 182 (209)
T 3rle_A 157 HEAKPLKLYVYNTDTDNCREVIITPN 182 (209)
T ss_dssp TTTSCEEEEEEETTTTEEEEEEECCC
T ss_pred CCCCeEEEEEEECCceEEEEEEEEec
Confidence 3788999999997643 56666654
No 350
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.17 E-value=3.3e-06 Score=75.44 Aligned_cols=64 Identities=27% Similarity=0.402 Sum_probs=52.2
Q ss_pred CCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHH-hhCCCCeEEEEEecCcceeEEEe
Q psy6405 78 KEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAI-LKRGPPVEITLIKDGAGLGFSLE 145 (548)
Q Consensus 78 ~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~-lk~g~~VtVtV~RdGkgLGfSIt 145 (548)
.+++|..|.++|||+++ |++||+|++|||+++.++.....+.. ...+..+.|+| |+++ +.+++.
T Consensus 25 ~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~~~~dl~~~l~~~~~g~~v~l~V-R~g~-~~v~l~ 89 (125)
T 2hga_A 25 DGVQIDSVVPGSPASKV--LTPGLVIESINGMPTSNLTTYSAALKTISVGEVINITT-DQGT-FHLKTG 89 (125)
T ss_dssp CCEEEEEECSSSGGGGT--SCTTCEEEEETTEECSSHHHHHHHHTTCCTTCEEEEEE-TTEE-EEEECC
T ss_pred CceEEEEECCCChHHHh--cCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE-ECCE-EEEEEe
Confidence 57999999999999988 99999999999999999976664333 45678899999 9877 444443
No 351
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.08 E-value=6.8e-06 Score=83.82 Aligned_cols=66 Identities=24% Similarity=0.435 Sum_probs=56.6
Q ss_pred CCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhCCCCeEEEEEecCcceeEEEec
Q psy6405 78 KEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKRGPPVEITLIKDGAGLGFSLEG 146 (548)
Q Consensus 78 ~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~g~~VtVtV~RdGkgLGfSItg 146 (548)
.+++|..|.++|||+++| |++||+|++|||+++.++.+... .+..+..+.|+|.|+++.+.++++.
T Consensus 256 ~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~~~~~l~~--~l~~~~~v~l~v~R~g~~~~~~v~~ 321 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQNAEDVYE--AVRTQSQLAVQIRRGRETLTLYVTP 321 (325)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSHHHHHH--HHTTCSSEEEEEEETTEEEEEEECC
T ss_pred CCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcCCHHHHHH--HHhCCCeEEEEEEECCEEEEEEEEE
Confidence 589999999999999999 99999999999999998865543 3344788999999999888887764
No 352
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.04 E-value=1.6e-06 Score=73.10 Aligned_cols=62 Identities=6% Similarity=0.053 Sum_probs=52.4
Q ss_pred CeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc-CCCceeEEEEeccccCCC
Q psy6405 156 PLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL-NDGTIQDIKALGYDLNSL 221 (548)
Q Consensus 156 gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~-~g~~V~LlV~RilDLr~~ 221 (548)
+++|..|.++|||++ | |++||+|++|||.++.++. ++..+++.. ++.++.+.+.|.......
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~~~--~l~~~l~~~~~g~~v~l~v~R~g~~~~~ 64 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQSAE--KLIDYISSKKAGDKVTLKIEREEKEKRV 64 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSSHH--HHHHHHSSCCSSCEECEEEESSSCEECC
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCCHH--HHHHHHHcCCCCCEEEEEEEECCEEEEE
Confidence 477889999999999 8 9999999999999998764 888888776 578899999997654443
No 353
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.01 E-value=6.1e-06 Score=68.18 Aligned_cols=59 Identities=17% Similarity=0.191 Sum_probs=50.9
Q ss_pred eEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCceeEEEEecccc
Q psy6405 157 LTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTIQDIKALGYDL 218 (548)
Q Consensus 157 I~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V~LlV~RilDL 218 (548)
+.|..|.++|||+++| |+.||+|++|||.++.++. ++...++...+..+.+.+.|....
T Consensus 6 ~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~--~~~~~l~~~~g~~v~l~v~R~g~~ 64 (91)
T 2zpm_A 6 PVLENVQPNSAASXAG-LQAGDRIVXVDGQPLTQWV--TFVMLVRDNPGXSLALEIERQGSP 64 (91)
T ss_dssp CBCSEECTTSHHHHTT-CCTTCEEEEETTEECCCHH--HHHHHHHHCTTCCEEEEEEETTEE
T ss_pred eEEEEECCCChHHhcC-CCCCCEEEEECCeEcCCHH--HHHHHHhcCCCCeEEEEEEECCeE
Confidence 5688899999999999 9999999999999999765 888888876677889999886543
No 354
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.00 E-value=9.1e-06 Score=68.73 Aligned_cols=57 Identities=12% Similarity=0.049 Sum_probs=49.2
Q ss_pred eEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCC-CceeEEEEecc
Q psy6405 157 LTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLND-GTIQDIKALGY 216 (548)
Q Consensus 157 I~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g-~~V~LlV~Ril 216 (548)
.+|..|.++|||+++| |+.||+|++|||+.+.++. ++...+....+ ..+.+.+.|..
T Consensus 4 p~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~--d~~~~l~~~~~~~~v~l~v~R~g 61 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQ-IAPGTELKAVDGIETPDWD--AVRLQLVDKIGDESTTITVAPFG 61 (95)
T ss_dssp CBEEEECTTSHHHHTT-CCTTCEEEEETTEECSSHH--HHHHHHHHTTTCSEEEEEEECTT
T ss_pred CEEEeeCCCCHHHHcC-CCCCCEEEEECCEECCCHH--HHHHHHHHhcCCCcEEEEEEECC
Confidence 4688999999999999 9999999999999999876 78788876544 67888888865
No 355
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=97.94 E-value=9.1e-06 Score=72.90 Aligned_cols=59 Identities=15% Similarity=0.052 Sum_probs=51.3
Q ss_pred CeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc-CCCceeEEEEecccc
Q psy6405 156 PLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL-NDGTIQDIKALGYDL 218 (548)
Q Consensus 156 gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~-~g~~V~LlV~RilDL 218 (548)
++.|..|.++|||+ +| |+.||+|++|||.++.++. ++...+... .+.++.+.+.|....
T Consensus 58 g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~~~~--~l~~~l~~~~~g~~v~l~v~R~g~~ 117 (134)
T 2l97_A 58 GVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIASST--DLQSALYNHSIGDTIKITYYRNGKE 117 (134)
T ss_dssp CEEEEECSTTSGGG-TT-SCSSCEEEEETTEECCCHH--HHHHHHHHSSTTCEEEEEEEETTEE
T ss_pred CEEEEEECCCCchH-HC-CCCCCEEEEECCEEcCCHH--HHHHHHHhCCCCCEEEEEEEECCEE
Confidence 68899999999999 99 9999999999999999875 777888776 577899999887543
No 356
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=97.93 E-value=6.1e-06 Score=69.60 Aligned_cols=61 Identities=16% Similarity=0.198 Sum_probs=52.3
Q ss_pred CCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc-CCCceeEEEEeccccC
Q psy6405 155 QPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL-NDGTIQDIKALGYDLN 219 (548)
Q Consensus 155 ~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~-~g~~V~LlV~RilDLr 219 (548)
.+++|..|.++|||++ | |++||+|++|||.++.++. ++..+++.. .+..+.+.+.|.....
T Consensus 5 ~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~~~--~l~~~l~~~~~g~~v~l~v~R~g~~~ 66 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINTSE--QIVSYVREKQAGDRVRVTFIRDRKQH 66 (94)
T ss_dssp CCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCCHH--HHHHHHHHSCTTCCEEEEEEETTEEE
T ss_pred CcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCHH--HHHHHHHhCCCCCEEEEEEEECCEEE
Confidence 3688999999999999 8 9999999999999998764 788888876 5789999999976543
No 357
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.92 E-value=9.3e-06 Score=67.20 Aligned_cols=59 Identities=15% Similarity=0.089 Sum_probs=48.8
Q ss_pred CeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc-CCCceeEEEEeccc
Q psy6405 156 PLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL-NDGTIQDIKALGYD 217 (548)
Q Consensus 156 gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~-~g~~V~LlV~RilD 217 (548)
++.|..+.++|+|+++| |++||+|++|||.++.++. ++.++++.. .+..+.+.+.|...
T Consensus 20 G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~~~~--d~~~~~~~~~~g~~v~l~v~R~g~ 79 (87)
T 2i6v_A 20 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDPN--VMNTLFQSMNEMTEMSLTVERDGQ 79 (87)
T ss_dssp EEEEEECSCHHHHHHTT-CCTTCEEEEETTEETTCHH--HHHHHHHTGGGCSEEEEEEEETTE
T ss_pred EEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECCCHH--HHHHHHHhcCCCCEEEEEEEECCE
Confidence 46677788888999999 9999999999999999876 677777764 46788888888653
No 358
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=97.91 E-value=1.4e-05 Score=68.85 Aligned_cols=60 Identities=20% Similarity=0.339 Sum_probs=51.1
Q ss_pred CCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCceeEEEEeccccC
Q psy6405 155 QPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTIQDIKALGYDLN 219 (548)
Q Consensus 155 ~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V~LlV~RilDLr 219 (548)
.++.|..|.++|||+++| |++||+|++|||.++.++ .++...++. +..+.+.+.|.....
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~~--~~~v~l~v~R~g~~~ 94 (113)
T 2pzd_A 35 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQNA--EDVYEAVRT--QSQLAVQIRRGRETL 94 (113)
T ss_dssp SCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECCSH--HHHHHHHHH--CSSEEEEEEETTEEE
T ss_pred CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHhC--CCeEEEEEEECCEEE
Confidence 368999999999999999 999999999999999864 478888876 578889998875443
No 359
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=97.90 E-value=1.5e-05 Score=67.66 Aligned_cols=61 Identities=18% Similarity=0.079 Sum_probs=51.7
Q ss_pred CCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc-CCCceeEEEEeccccC
Q psy6405 155 QPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL-NDGTIQDIKALGYDLN 219 (548)
Q Consensus 155 ~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~-~g~~V~LlV~RilDLr 219 (548)
.+++|..|.++|||+. | |++||+|++|||.++.++. ++.+.+... .+..+.+.+.|.....
T Consensus 7 ~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~~~~--dl~~~l~~~~~g~~v~l~v~R~g~~~ 68 (100)
T 3i18_A 7 DGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFKSSQ--EFIDYIHSKKVGDTVKINYKHGDKNE 68 (100)
T ss_dssp CCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCSSHH--HHHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred CCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECCCHH--HHHHHHHhCCCCCEEEEEEEECCEEE
Confidence 3799999999999995 8 9999999999999999875 788888864 4678899998876543
No 360
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.90 E-value=2.2e-05 Score=81.86 Aligned_cols=74 Identities=27% Similarity=0.361 Sum_probs=61.8
Q ss_pred ceeEEEecC-CCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCceeEEEEeccc
Q psy6405 139 GLGFSLEGG-KDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTIQDIKALGYD 217 (548)
Q Consensus 139 gLGfSItgg-~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V~LlV~RilD 217 (548)
++|+.+... ... .+++|..|.++|||+++| |++||+|++|||+++.+++..++..+++...+..+.+.+.|...
T Consensus 86 giG~~~~~~~~~~----~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g~ 160 (388)
T 1fc6_A 86 GVGLEITYDGGSG----KDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPGA 160 (388)
T ss_dssp BCSEEEEECTTCS----SCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETTE
T ss_pred EEEEEEEEeecCC----CcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCCC
Confidence 467777643 111 258999999999999999 99999999999999999988899999987778889999988654
No 361
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.86 E-value=2.7e-05 Score=82.69 Aligned_cols=68 Identities=19% Similarity=0.416 Sum_probs=56.0
Q ss_pred CCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhCCCCeEEEEEecCcceeEEEecC
Q psy6405 78 KEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKRGPPVEITLIKDGAGLGFSLEGG 147 (548)
Q Consensus 78 ~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~g~~VtVtV~RdGkgLGfSItgg 147 (548)
.+++|..|.++|||+++| |++||+|++|||+++.++.....+... .+..+.++|.|++..+.+++...
T Consensus 363 ~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~l~~-~~~~v~l~v~R~g~~~~~~~~~~ 430 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRVNSIAEMRKVLAA-KPAIIALQIVRGNESIYLLMRLE 430 (436)
T ss_pred CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCHHHHHHHHHh-CCCeEEEEEEECCEEEEEEEEec
Confidence 479999999999999999 999999999999999988665543333 34478999999988777777643
No 362
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.84 E-value=2.4e-05 Score=83.56 Aligned_cols=65 Identities=15% Similarity=0.256 Sum_probs=53.8
Q ss_pred CCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhCCCCeEEEEEecCcceeEEE
Q psy6405 78 KEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKRGPPVEITLIKDGAGLGFSL 144 (548)
Q Consensus 78 ~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~g~~VtVtV~RdGkgLGfSI 144 (548)
.+++|..|.++|||+++| |++||+|++|||+++.++.+...+... .+..+.++|.|++..+-+.+
T Consensus 386 ~Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng~~v~~~~~~~~~l~~-~~~~v~l~v~R~g~~~~v~l 450 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAG-IRPGDIIISANKKPVTDVKSLQTIAQE-KKKELLVQVLRGPGSMYLLV 450 (451)
T ss_dssp EEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSHHHHHHHTTS-SCSCEEEEEEETTEEEEEEE
T ss_pred CceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCHHHHHHHHhc-CCCeEEEEEEECCEEEEEEe
Confidence 478999999999999999 999999999999999988665543222 56789999999887765554
No 363
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.83 E-value=1.3e-05 Score=92.04 Aligned_cols=81 Identities=17% Similarity=0.193 Sum_probs=63.0
Q ss_pred CCCceEEEEEeCCCCCCCCeEEEEEcCC--------ChhhhcCC-CCCCCEEEEECCeeccCccHHHHHHHhhCCCCeEE
Q psy6405 61 PGNSVGITLAGGSDYESKEITVHKVISG--------TPADRDGR-LQKGDRILSINGKSMKGLTHKESLAILKRGPPVEI 131 (548)
Q Consensus 61 ~~~GLGfsIagG~d~~~~gVvVs~V~pG--------SPAaqAGr-Lq~GDrILaINGv~V~~~s~~~aV~~lk~g~~VtV 131 (548)
...++|+.+... +++++|..|.++ |||+++|. |+ ||+|++|||+++..+........-..|..+.|
T Consensus 735 ~~~g~G~~~~~~----~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~~~~~~~~~~~g~~v~l 809 (1045)
T 1k32_A 735 RSGRIACDFKLD----GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGSNIYRVLSEKAGTSARI 809 (1045)
T ss_dssp CCCBCSEEEEEE----TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTBCHHHHHHTTTTSEEEE
T ss_pred ccceecEEEEEe----CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchhhHHHhhcCCCCCEEEE
Confidence 356899888742 358999999998 99999994 89 99999999999999875443334456888999
Q ss_pred EEEecCc-ceeEEEec
Q psy6405 132 TLIKDGA-GLGFSLEG 146 (548)
Q Consensus 132 tV~RdGk-gLGfSItg 146 (548)
+|.|.+. .+.++|++
T Consensus 810 ~v~r~~~~~~~~~~~~ 825 (1045)
T 1k32_A 810 RLSGKGGDKRDLMIDI 825 (1045)
T ss_dssp EEECSSSCEEEEEEEC
T ss_pred EEECCCCceEEEEEEE
Confidence 9999763 34566653
No 364
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.79 E-value=4e-05 Score=65.63 Aligned_cols=59 Identities=15% Similarity=0.089 Sum_probs=48.4
Q ss_pred CeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc-CCCceeEEEEeccc
Q psy6405 156 PLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL-NDGTIQDIKALGYD 217 (548)
Q Consensus 156 gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~-~g~~V~LlV~RilD 217 (548)
++.|..+.++|+|+++| |++||+|++|||.++.++. ++.++++.. ++..+.+.+.|...
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~~--d~~~~~~~~~~g~~v~l~v~R~g~ 97 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDPN--VMNTLFQSMNEMTEMSLTVERDGQ 97 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTSTT--HHHHHHHHHTTCSEEEEEEEETTE
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCHH--HHHHHHHhcCCCCeEEEEEEECCE
Confidence 35677777888889999 9999999999999999998 666777764 46788888888653
No 365
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.79 E-value=3.1e-06 Score=86.42 Aligned_cols=68 Identities=24% Similarity=0.411 Sum_probs=0.0
Q ss_pred CCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhCCCCeEEEEEecCcceeEEEecCC
Q psy6405 78 KEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKRGPPVEITLIKDGAGLGFSLEGGK 148 (548)
Q Consensus 78 ~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~g~~VtVtV~RdGkgLGfSItgg~ 148 (548)
.+++|..|.++|||+++| |++||+|++|||+++.++.....+ +..+..+.|+|.|+++.+.+++++..
T Consensus 254 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~--l~~~~~v~l~v~R~g~~~~~~v~p~~ 321 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVVSANDVSDV--IKRESTLNMVVRRGNEDIMITVIPEE 321 (332)
T ss_dssp -----------------------------------------------------------------------
T ss_pred CceEEEEeccCCChHHcC-CCCCCEEEEECCEECCCHHHHHHH--HhCCCeEEEEEEECCEEEEEEEEEee
Confidence 478999999999999999 999999999999999887665432 33478899999999988888887643
No 366
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=97.72 E-value=4.6e-05 Score=65.58 Aligned_cols=59 Identities=19% Similarity=0.290 Sum_probs=49.7
Q ss_pred CCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCceeEEEEecccc
Q psy6405 155 QPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTIQDIKALGYDL 218 (548)
Q Consensus 155 ~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V~LlV~RilDL 218 (548)
.+++|..|.++|||+++| |++||+|++|||.++.++. ++...++. +..+.+.+.|....
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~--~~~~~l~~--g~~v~l~v~R~g~~ 93 (112)
T 2p3w_A 35 SGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLVDSS--ELQEAVLT--ESPLLLEVRRGNDD 93 (112)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSHH--HHHHHHHH--CSSEEEEEEETTEE
T ss_pred CCeEEEEECCCChHHHCC-CCCCCEEEEECCEECCCHH--HHHHHHhC--CCeEEEEEEECCEE
Confidence 368999999999999999 9999999999999998754 77777743 67888888886543
No 367
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.53 E-value=5.3e-05 Score=80.18 Aligned_cols=75 Identities=20% Similarity=0.175 Sum_probs=56.5
Q ss_pred CcceeEEEecCCCCCCCCCCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCceeEEEEecc
Q psy6405 137 GAGLGFSLEGGKDSPFGDQPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTIQDIKALGY 216 (548)
Q Consensus 137 GkgLGfSItgg~~s~lG~~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V~LlV~Ril 216 (548)
..++++++....... ....++|..|.++|||+++| |++||+|++|||+++.++. +.++++. ++.++.+.+.|..
T Consensus 73 ~~G~~~~l~~~~~~~-~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~-~g~~v~l~v~R~g 146 (403)
T 3k50_A 73 SYGFDYTLYKVLDND-TAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQG-STRQLQIGVYKEV 146 (403)
T ss_dssp BCSEEEEEEECTTCS-SCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSC-SCEEEEEEEEEEE
T ss_pred ccceEEEEEEcCCCC-cceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhC-CCCEEEEEEEeCC
Confidence 345666665433210 00126899999999999999 9999999999999999986 5567777 6788999998865
Q ss_pred c
Q psy6405 217 D 217 (548)
Q Consensus 217 D 217 (548)
.
T Consensus 147 ~ 147 (403)
T 3k50_A 147 V 147 (403)
T ss_dssp C
T ss_pred c
Confidence 4
No 368
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.46 E-value=0.00013 Score=73.89 Aligned_cols=61 Identities=18% Similarity=0.261 Sum_probs=53.1
Q ss_pred CCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHH-cCCCceeEEEEecccc
Q psy6405 155 QPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKK-LNDGTIQDIKALGYDL 218 (548)
Q Consensus 155 ~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs-~~g~~V~LlV~RilDL 218 (548)
.++.|..|.++|||+++| |++||+|++|||+++.++. ++.++++. .++.++.+.+.|....
T Consensus 244 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~--~l~~~l~~~~~g~~v~l~v~R~g~~ 305 (318)
T 1te0_A 244 QGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAISAL--ETMDQVAEIRPGSVIPVVVMRDDKQ 305 (318)
T ss_dssp CCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECCCHH--HHHHHHHTSCTTCEEEEEEESSSCE
T ss_pred CcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcCCHH--HHHHHHHhcCCCCEEEEEEEECCEE
Confidence 478999999999999999 9999999999999998765 78888886 4578899999987543
No 369
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.45 E-value=0.00023 Score=72.05 Aligned_cols=60 Identities=12% Similarity=0.194 Sum_probs=51.6
Q ss_pred CCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc-CCCceeEEEEe-ccc
Q psy6405 155 QPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL-NDGTIQDIKAL-GYD 217 (548)
Q Consensus 155 ~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~-~g~~V~LlV~R-ilD 217 (548)
.++.|..|.++|||+++| |+.||+|++|||+++.++. ++...+... ++.++.+.+.| ...
T Consensus 242 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~--~l~~~l~~~~~g~~v~l~v~R~~g~ 303 (324)
T 1y8t_A 242 LGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPINSAD--ALVAAVRSKAPGATVALTFQDPSGG 303 (324)
T ss_dssp SSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECCSHH--HHHHHHHTSCTTCEEEEEEECSSCC
T ss_pred CceEEEEECCCChHHHcC-CCCCCEEEEECCEECCCHH--HHHHHHHhcCCCCEEEEEEEECCCC
Confidence 368999999999999999 9999999999999999875 777788763 57789999988 543
No 370
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.42 E-value=0.00015 Score=74.91 Aligned_cols=62 Identities=21% Similarity=0.231 Sum_probs=53.9
Q ss_pred CCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHc-CCCceeEEEEeccccC
Q psy6405 155 QPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKL-NDGTIQDIKALGYDLN 219 (548)
Q Consensus 155 ~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~-~g~~V~LlV~RilDLr 219 (548)
.+++|..|.++|||+++| |++||+|++|||+.+.++. ++..+++.. ++.++.+.+.|.....
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~~~~--~l~~~l~~~~~g~~v~l~v~R~g~~~ 325 (345)
T 3stj_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNSFA--ELRSRIATTEPGTKVKLGLLRNGKPL 325 (345)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEECEETTEECSCHH--HHHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred ceEEEEEeccCChHHHcC-CCCCCEEEEECCEECCCHH--HHHHHHHhcCCCCEEEEEEEECCEEE
Confidence 478999999999999999 9999999999999999765 788888764 5789999999976543
No 371
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.34 E-value=0.00025 Score=63.18 Aligned_cols=57 Identities=21% Similarity=0.204 Sum_probs=48.6
Q ss_pred CeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHH-cCCCceeEEEEeccc
Q psy6405 156 PLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKK-LNDGTIQDIKALGYD 217 (548)
Q Consensus 156 gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs-~~g~~V~LlV~RilD 217 (548)
++.|..|.++|||+++ |+.||+|++|||.++.++. ++...++. ..+..+.+.+ |...
T Consensus 26 gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~~~~--dl~~~l~~~~~g~~v~l~V-R~g~ 83 (125)
T 2hga_A 26 GVQIDSVVPGSPASKV--LTPGLVIESINGMPTSNLT--TYSAALKTISVGEVINITT-DQGT 83 (125)
T ss_dssp CEEEEEECSSSGGGGT--SCTTCEEEEETTEECSSHH--HHHHHHTTCCTTCEEEEEE-TTEE
T ss_pred ceEEEEECCCChHHHh--cCCCCEEEEECCEEcCCHH--HHHHHHHhcCCCCEEEEEE-ECCE
Confidence 6899999999999998 9999999999999999875 77777774 3467888888 7654
No 372
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.34 E-value=0.00023 Score=73.13 Aligned_cols=64 Identities=23% Similarity=0.271 Sum_probs=54.8
Q ss_pred CCCCeEEEEeccCChhhhcCCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHHHc-CCCceeEEEEeccccC
Q psy6405 153 GDQPLTVKKIFTGGCAEKNGQLKA-----------GDEILTINNVPVTEMSRIEAWSLLKKL-NDGTIQDIKALGYDLN 219 (548)
Q Consensus 153 G~~gI~VssV~pgSpAekaGrLq~-----------GDrILaVNGvsV~~~t~~EavelLrs~-~g~~V~LlV~RilDLr 219 (548)
+..+++|..|.++|||+++| |+. ||+|++|||+++.++. ++...+... .+.++++.+.|.....
T Consensus 249 ~~~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~~--dl~~~l~~~~~g~~v~l~v~R~g~~~ 324 (348)
T 3qo6_A 249 GVSGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNGS--DLYRILDQCKVGDEVTVEVLRGDHKE 324 (348)
T ss_dssp TCSSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSSH--HHHHHHTTCCTTCEEEEEEECSSSEE
T ss_pred CCceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCHH--HHHHHHHhCCCcCEEEEEEEECCEEE
Confidence 44689999999999999999 999 9999999999999986 777888653 4778999999876543
No 373
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.26 E-value=0.00022 Score=72.67 Aligned_cols=60 Identities=20% Similarity=0.355 Sum_probs=51.4
Q ss_pred CCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCceeEEEEeccccC
Q psy6405 155 QPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTIQDIKALGYDLN 219 (548)
Q Consensus 155 ~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V~LlV~RilDLr 219 (548)
.++.|..|.++|||+++| |+.||+|++|||+++.++. ++.+.++. +.++.+.+.|.....
T Consensus 256 ~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~~~~--~l~~~l~~--~~~v~l~v~R~g~~~ 315 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQNAE--DVYEAVRT--QSQLAVQIRRGRETL 315 (325)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSHH--HHHHHHTT--CSSEEEEEEETTEEE
T ss_pred CCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcCCHH--HHHHHHhC--CCeEEEEEEECCEEE
Confidence 478999999999999999 9999999999999998765 77787765 468899998876543
No 374
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.25 E-value=0.00027 Score=78.27 Aligned_cols=62 Identities=24% Similarity=0.350 Sum_probs=51.4
Q ss_pred CeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHH-cCCCceeEEEEeccccCCC
Q psy6405 156 PLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKK-LNDGTIQDIKALGYDLNSL 221 (548)
Q Consensus 156 gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs-~~g~~V~LlV~RilDLr~~ 221 (548)
++.|..|.++|||+++| |++||+|++|||.+|. .. ++.++++. .++.+|.++|.|.......
T Consensus 497 gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~-~~--~l~~~l~~~~~g~~v~l~v~R~g~~~~~ 559 (597)
T 4fgm_A 497 GLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQAT-EQ--SVKRILERYIPGDTVTIHAFRRDELMTL 559 (597)
T ss_dssp EEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC-TT--THHHHHTTCCTTCEEEEEEEETTEEEEE
T ss_pred eEEEEEeCCCChHHHCC-CCCCCEEEEECCEECC-HH--HHHHHHHhcCCCCEEEEEEEECCEEEEE
Confidence 58999999999999999 9999999999999994 33 56677765 3578999999998765433
No 375
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.18 E-value=5.7e-05 Score=80.67 Aligned_cols=65 Identities=23% Similarity=0.403 Sum_probs=0.0
Q ss_pred CCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHHHhhCCCCeEEEEEecCcceeEEE
Q psy6405 78 KEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLAILKRGPPVEITLIKDGAGLGFSL 144 (548)
Q Consensus 78 ~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~~lk~g~~VtVtV~RdGkgLGfSI 144 (548)
.+++|..|.++|||+++| |++||+|++|||+++.++.+...+..... ..+.|+|.|++..+.+++
T Consensus 383 ~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v~~~~~l~~~l~~~~-~~v~l~v~R~g~~~~~~l 447 (448)
T 1ky9_A 383 QGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVKNIAELRKVLDSKP-SVLALNIQRGDSTIYLLM 447 (448)
T ss_dssp -------------------------------------------------------------------
T ss_pred CeEEEEEecCCCHHHHcC-CCCCCEEEEECCEECCCHHHHHHHHHcCC-CeEEEEEEECCEEEEEEe
Confidence 578999999999999999 99999999999999988765543322222 378888888877655443
No 376
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=96.92 E-value=0.00014 Score=74.16 Aligned_cols=62 Identities=21% Similarity=0.312 Sum_probs=0.0
Q ss_pred CCeEEEEeccCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCceeEEEEeccccCCC
Q psy6405 155 QPLTVKKIFTGGCAEKNGQLKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTIQDIKALGYDLNSL 221 (548)
Q Consensus 155 ~gI~VssV~pgSpAekaGrLq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V~LlV~RilDLr~~ 221 (548)
.+++|..|.++|||+++| |++||+|++|||+++.++. ++.+.++. +..+++.+.|.......
T Consensus 254 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~--~~~~~l~~--~~~v~l~v~R~g~~~~~ 315 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVVSAN--DVSDVIKR--ESTLNMVVRRGNEDIMI 315 (332)
T ss_dssp -------------------------------------------------------------------
T ss_pred CceEEEEeccCCChHHcC-CCCCCEEEEECCEECCCHH--HHHHHHhC--CCeEEEEEEECCEEEEE
Confidence 368899999999999999 9999999999999998776 67777765 56788888887654433
No 377
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.09 E-value=0.0079 Score=68.96 Aligned_cols=58 Identities=17% Similarity=0.075 Sum_probs=51.7
Q ss_pred CeEEEEeccC--------ChhhhcCC-CCCCCEEEEECCEEcCCCCHHHHHHHHHHcCCCceeEEEEecc
Q psy6405 156 PLTVKKIFTG--------GCAEKNGQ-LKAGDEILTINNVPVTEMSRIEAWSLLKKLNDGTIQDIKALGY 216 (548)
Q Consensus 156 gI~VssV~pg--------SpAekaGr-Lq~GDrILaVNGvsV~~~t~~EavelLrs~~g~~V~LlV~Ril 216 (548)
+++|..|.++ |||+++|. |+ ||+|++|||+++.++. ++..++++..+.++.+.+.|..
T Consensus 749 ~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~~v~l~v~r~~ 815 (1045)
T 1k32_A 749 HYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAGTSARIRLSGKG 815 (1045)
T ss_dssp EEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTTSEEEEEEECSS
T ss_pred EEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCCCEEEEEEECCC
Confidence 4889999987 99999994 89 9999999999999987 7889999888889999998854
No 378
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=93.84 E-value=0.081 Score=58.02 Aligned_cols=43 Identities=14% Similarity=0.250 Sum_probs=39.0
Q ss_pred CCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCccHHHHHH
Q psy6405 78 KEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGLTHKESLA 121 (548)
Q Consensus 78 ~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~s~~~aV~ 121 (548)
.+|+|+.|.++++|...| ++.||+|++|||++|.+..+...+.
T Consensus 415 ~gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg~~V~s~~~l~~~l 457 (539)
T 4fln_A 415 QIVILSQVLANEVNIGYE-DMNNQQVLKFNGIPIRNIHHLAHLI 457 (539)
T ss_dssp CCEEEEEECCCGGGTTCS-SCCSEEEEEETTEECCSHHHHHHHH
T ss_pred eEEEEEEecCCchhhhcC-CCCCCEEEeECCEEcCCHHHHHHHH
Confidence 479999999999999999 9999999999999999998876543
No 379
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=32.48 E-value=37 Score=37.64 Aligned_cols=44 Identities=16% Similarity=0.354 Sum_probs=29.4
Q ss_pred CceEEEEEeCCCCCCCCeEEEEEcCCChhhhcCCCCCCCEEEEECCeeccCc
Q psy6405 63 NSVGITLAGGSDYESKEITVHKVISGTPADRDGRLQKGDRILSINGKSMKGL 114 (548)
Q Consensus 63 ~GLGfsIagG~d~~~~gVvVs~V~pGSPAaqAGrLq~GDrILaINGv~V~~~ 114 (548)
..+||.++...+ +.++|..+.... + + +.+||+|++|||.++..+
T Consensus 84 a~~Pf~vki~iD---G~i~V~dv~~~~-s---~-I~vGdEIlsING~pv~e~ 127 (583)
T 3dor_A 84 AYLPYTVQKSSD---GRFYFVDIMTFS-S---E-IRVGDELLEVDGAPVQDV 127 (583)
T ss_dssp EECSEEEEECTT---SCEEEEEECSSC-C---S-SCTTCEEEEETTEEHHHH
T ss_pred ccCCeEEEEEEC---CcEEEEeccccc-c---C-CCCCCEEEEECCccHHHH
Confidence 345666552222 457877663322 2 5 999999999999998654
Done!