BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6409
(1832 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9BUQ8|DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 OS=Homo sapiens GN=DDX23
PE=1 SV=3
Length = 820
Score = 983 bits (2540), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/770 (65%), Positives = 614/770 (79%), Gaps = 57/770 (7%)
Query: 427 DRSKERDGKDR---REGYRRERREEEASGSKHKSRDKEGYEPTEQMVISDEEEDKG-AAA 482
D+ ++R+ KDR ++G+RR++ + +S S + +D + + + DEE++ G
Sbjct: 80 DKERDRNKKDRDRDKDGHRRDKDRKRSSLSPGRGKDFKSRKDRDSK--KDEEDEHGDKKP 137
Query: 483 KKEPLSLEELLAKKKAEEEARSKPKFLTKEERAAEALRKRQAEVEEMRKKMEEERKKRQE 542
K +PLSLEELLAKKKAEEEA +KPKFL+K ER AEAL++RQ EVEE ++ +EEERKKR++
Sbjct: 138 KAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQ 197
Query: 543 F------------TKEASFESKRENFDARLRRDREKKKEDPEEKELNKDKEREGEAIKER 590
F +E +R + D E +++ EEK DK +E AIKER
Sbjct: 198 FQDLGRKMLEDPQERERRERRERMERETNGNEDEEGRQKIREEK----DKSKELHAIKER 253
Query: 591 YLGLVKKKRRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFGRGNIAGIDIKAQK 650
YLG +KK+RR R LNDRKFVF+WDASEDTS+DYN +YKERHQVQ GRG IAGID+K QK
Sbjct: 254 YLGGIKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLGRGFIAGIDLKQQK 313
Query: 651 RDQSKFYGEMLEKRRTEAEKEQEKVRLKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIF 710
R+QS+FYG+++EKRRT EKEQE+ RL+K++K+E KQ+WDDRHW++K LDEMT+RDWRIF
Sbjct: 314 REQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWRIF 373
Query: 711 REDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIG 770
REDYSIT KGGK+P+P+R+WK++SLP ILE+I+K GY EPTPIQRQAIPIGLQNRDIIG
Sbjct: 374 REDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIG 433
Query: 771 VAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGT 830
VAETGSGKT AFL+PLLVWI +LPKI R+E++DQGPYAII+APTRELAQQIEEET KFG
Sbjct: 434 VAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGK 493
Query: 831 PLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADR 890
PLGIRTV V+GG+SRE+QGFRLR+GCEIVIATPGRLIDVLENRYLVL++CTY+VLDEADR
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADR 553
Query: 891 MIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNS-KKKYRQTVMFTATMPPAV 949
MIDMGFEPDVQKILE+MPV+N KPDT++AED K+LAN+ S K KYRQTVMFTATMPPAV
Sbjct: 554 MIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAV 613
Query: 950 ERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKKLMEVLNRGVKKPVIIFVNQ 1009
ERLARSYLRRPA VYIGS GKP ER+EQ V+++SE +KRKKL+ +L +G P+IIFVNQ
Sbjct: 614 ERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQ 673
Query: 1010 KKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDV 1069
KKG DVLAK LEK+GYNACTLHGGKGQEQRE AL++LK G+KDILVATDVAGRGIDI+DV
Sbjct: 674 KKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDV 733
Query: 1070 SMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVTGRAG 1129
SMV+NYDMAK+IEDY HRIGRTGRAGK G+A++F TK+DS +FY+LKQ +
Sbjct: 734 SMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAI---------- 783
Query: 1130 KEGLAVSFCTKDDSHLFYDLKQMMISSPVSTCPPELLNHPDAQHKPGTVM 1179
+ SPVS+CPPEL NHPDAQHKPGT++
Sbjct: 784 ------------------------LESPVSSCPPELANHPDAQHKPGTIL 809
Score = 971 bits (2510), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/581 (77%), Positives = 524/581 (90%), Gaps = 2/581 (0%)
Query: 1253 KDKEREGEAIKERYLGLVKKKRRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFG 1312
KDK +E AIKERYLG +KK+RR R LNDRKFVF+WDASEDTS+DYN +YKERHQVQ G
Sbjct: 241 KDKSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLG 300
Query: 1313 RGNIAGIDIKAQKRDQSKFYGEMLEKRRTEAEKEQEKVRLKKVKKREEKQKWDDRHWTEK 1372
RG IAGID+K QKR+QS+FYG+++EKRRT EKEQE+ RL+K++K+E KQ+WDDRHW++K
Sbjct: 301 RGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQK 360
Query: 1373 SLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQ 1432
LDEMT+RDWRIFREDYSIT KGGK+P+P+R+WK++SLP ILE+I+K GY EPTPIQRQ
Sbjct: 361 KLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQ 420
Query: 1433 AIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTREL 1492
AIPIGLQNRDIIGVAETGSGKT AFL+PLLVWI +LPKI R+E++DQGPYAII+APTREL
Sbjct: 421 AIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 1493 AQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVL 1552
AQQIEEET KFG PLGIRTV V+GG+SRE+QGFRLR+GCEIVIATPGRLIDVLENRYLVL
Sbjct: 481 AQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVL 540
Query: 1553 NQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNS-KKKYR 1611
++CTY+VLDEADRMIDMGFEPDVQKILE+MPV+N KPDT++AED K+LAN+ S K KYR
Sbjct: 541 SRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYR 600
Query: 1612 QTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKKLMEVLN 1671
QTVMFTATMPPAVERLARSYLRRPA VYIGS GKP ER+EQ V+++SE +KRKKL+ +L
Sbjct: 601 QTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILE 660
Query: 1672 RGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVA 1731
+G P+IIFVNQKKG DVLAK LEK+GYNACTLHGGKGQEQRE AL++LK G+KDILVA
Sbjct: 661 QGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVA 720
Query: 1732 TDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLK 1791
TDVAGRGIDI+DVSMV+NYDMAK+IEDY HRIGRTGRAGK G+A++F TK+DS +FY+LK
Sbjct: 721 TDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELK 780
Query: 1792 QMMISSPVSTCPPELLNHPDAQHKPGTVMVPKKRREEKIFA 1832
Q ++ SPVS+CPPEL NHPDAQHKPGT++ KKRREE IFA
Sbjct: 781 QAILESPVSSCPPELANHPDAQHKPGTILT-KKRREETIFA 820
Score = 521 bits (1342), Expect = e-146, Method: Compositional matrix adjust.
Identities = 254/365 (69%), Positives = 289/365 (79%), Gaps = 48/365 (13%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMED 60
+I+K GY EPTPIQRQAIPIGLQNRDIIGVAETGSGKT AFL+PLLVWI +LPKI R+E+
Sbjct: 405 VIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEE 464
Query: 61 ADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIA 120
+DQGPYAII+APTRELAQQIEEET KFG PLGIRTV V+GG+SRE+QGFRLR+GCEIVIA
Sbjct: 465 SDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIA 524
Query: 121 TPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAED 180
TPGRLIDVLENRYLVL++CTY+VLDEADRMIDMGFEPDVQKILE+MPV+N KPDT++AED
Sbjct: 525 TPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAED 584
Query: 181 ENKLLANYNS-KKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKK 239
K+LAN+ S K KYRQTVMFTATMPP
Sbjct: 585 PEKMLANFESGKHKYRQTVMFTATMPP--------------------------------- 611
Query: 240 KYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKKLME 299
AVERLARSYLRRPA VYIGS GKP ER+EQ V+++SE +KRKKL+
Sbjct: 612 --------------AVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLA 657
Query: 300 VLNRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDI 359
+L +G P+IIFVNQKKG DVLAK LEK+GYNACTLHGGKGQEQRE AL++LK G+KDI
Sbjct: 658 ILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDI 717
Query: 360 LMAGD 364
L+A D
Sbjct: 718 LVATD 722
>sp|Q5RC67|DDX23_PONAB Probable ATP-dependent RNA helicase DDX23 OS=Pongo abelii GN=DDX23
PE=2 SV=1
Length = 820
Score = 978 bits (2529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/770 (65%), Positives = 612/770 (79%), Gaps = 57/770 (7%)
Query: 427 DRSKERDGKDR---REGYRRERREEEASGSKHKSRDKEGYEPTEQMVISDEEEDKG-AAA 482
D+ ++R+ KDR ++G+RR++ + +S S + +D + + + DEE++ G
Sbjct: 80 DKERDRNKKDRDRDKDGHRRDKDRKRSSLSPGRGKDFKSRKDRDSK--KDEEDEHGDKKP 137
Query: 483 KKEPLSLEELLAKKKAEEEARSKPKFLTKEERAAEALRKRQAEVEEMRKKMEEERKKRQE 542
K +PLSLEELLAKKKAEEEA +KPKFL+K ER AEAL++RQ EVEE ++ +EEERKKR++
Sbjct: 138 KAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQ 197
Query: 543 F------------TKEASFESKRENFDARLRRDREKKKEDPEEKELNKDKEREGEAIKER 590
F +E +R + D E +++ EEK DK +E AIKER
Sbjct: 198 FQDLGRKMLEDPQERERRERRERMERETNGNEDEEGRQKIREEK----DKSKELHAIKER 253
Query: 591 YLGLVKKKRRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFGRGNIAGIDIKAQK 650
YLG +KK+RR R LNDRKFVF+WDASEDTS+DYN +YKERHQVQ GRG IAGID+K QK
Sbjct: 254 YLGGIKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLGRGFIAGIDLKQQK 313
Query: 651 RDQSKFYGEMLEKRRTEAEKEQEKVRLKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIF 710
R+QS+FYG+++EKRRT EKEQE+ R +K++K+E KQ+WDDRHW++K LDEMT+RDWRIF
Sbjct: 314 REQSRFYGDLMEKRRTLEEKEQEEARFRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWRIF 373
Query: 711 REDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIG 770
REDYSIT KGGK+P+P+R+WK++SLP ILE+I+K GY EPTPIQRQAIPIGLQNRDIIG
Sbjct: 374 REDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIG 433
Query: 771 VAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGT 830
VAETGSGKT AFL+PLLVWI +LPKI R+E++DQGPYAII+APTRELAQQIEEET KFG
Sbjct: 434 VAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGK 493
Query: 831 PLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADR 890
PLGIRTV V+GG+SRE+QGFRLR+GCEIVIATPGRLIDVLENRYLV ++CTY+VLDEADR
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVPSRCTYVVLDEADR 553
Query: 891 MIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNS-KKKYRQTVMFTATMPPAV 949
MIDMGFEPDVQKILE+MPV+N KPDT++AED K+LAN+ S K KYRQTVMFTATMPPAV
Sbjct: 554 MIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAV 613
Query: 950 ERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKKLMEVLNRGVKKPVIIFVNQ 1009
ERLARSYLRRPA VYIGS GKP ER+EQ V+++SE +KRKKL+ +L +G P+IIFVNQ
Sbjct: 614 ERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQ 673
Query: 1010 KKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDV 1069
KKG DVLAK LEK+GYNACTLHGGKGQEQRE AL++LK G+KDILVATDVAGRGIDI+DV
Sbjct: 674 KKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDV 733
Query: 1070 SMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVTGRAG 1129
SMV+NYDMAK+IEDY HRIGRTGRAGK G+A++F TK+DS +FY+LKQ +
Sbjct: 734 SMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAI---------- 783
Query: 1130 KEGLAVSFCTKDDSHLFYDLKQMMISSPVSTCPPELLNHPDAQHKPGTVM 1179
+ SPVS+CPPEL NHPDAQHKPGT++
Sbjct: 784 ------------------------LESPVSSCPPELANHPDAQHKPGTIL 809
Score = 967 bits (2500), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/581 (76%), Positives = 522/581 (89%), Gaps = 2/581 (0%)
Query: 1253 KDKEREGEAIKERYLGLVKKKRRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFG 1312
KDK +E AIKERYLG +KK+RR R LNDRKFVF+WDASEDTS+DYN +YKERHQVQ G
Sbjct: 241 KDKSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLG 300
Query: 1313 RGNIAGIDIKAQKRDQSKFYGEMLEKRRTEAEKEQEKVRLKKVKKREEKQKWDDRHWTEK 1372
RG IAGID+K QKR+QS+FYG+++EKRRT EKEQE+ R +K++K+E KQ+WDDRHW++K
Sbjct: 301 RGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARFRKLRKKEAKQRWDDRHWSQK 360
Query: 1373 SLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQ 1432
LDEMT+RDWRIFREDYSIT KGGK+P+P+R+WK++SLP ILE+I+K GY EPTPIQRQ
Sbjct: 361 KLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQ 420
Query: 1433 AIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTREL 1492
AIPIGLQNRDIIGVAETGSGKT AFL+PLLVWI +LPKI R+E++DQGPYAII+APTREL
Sbjct: 421 AIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 1493 AQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVL 1552
AQQIEEET KFG PLGIRTV V+GG+SRE+QGFRLR+GCEIVIATPGRLIDVLENRYLV
Sbjct: 481 AQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVP 540
Query: 1553 NQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNS-KKKYR 1611
++CTY+VLDEADRMIDMGFEPDVQKILE+MPV+N KPDT++AED K+LAN+ S K KYR
Sbjct: 541 SRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYR 600
Query: 1612 QTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKKLMEVLN 1671
QTVMFTATMPPAVERLARSYLRRPA VYIGS GKP ER+EQ V+++SE +KRKKL+ +L
Sbjct: 601 QTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILE 660
Query: 1672 RGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVA 1731
+G P+IIFVNQKKG DVLAK LEK+GYNACTLHGGKGQEQRE AL++LK G+KDILVA
Sbjct: 661 QGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVA 720
Query: 1732 TDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLK 1791
TDVAGRGIDI+DVSMV+NYDMAK+IEDY HRIGRTGRAGK G+A++F TK+DS +FY+LK
Sbjct: 721 TDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELK 780
Query: 1792 QMMISSPVSTCPPELLNHPDAQHKPGTVMVPKKRREEKIFA 1832
Q ++ SPVS+CPPEL NHPDAQHKPGT++ KKRREE IFA
Sbjct: 781 QAILESPVSSCPPELANHPDAQHKPGTILT-KKRREETIFA 820
Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust.
Identities = 253/365 (69%), Positives = 288/365 (78%), Gaps = 48/365 (13%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMED 60
+I+K GY EPTPIQRQAIPIGLQNRDIIGVAETGSGKT AFL+PLLVWI +LPKI R+E+
Sbjct: 405 VIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEE 464
Query: 61 ADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIA 120
+DQGPYAII+APTRELAQQIEEET KFG PLGIRTV V+GG+SRE+QGFRLR+GCEIVIA
Sbjct: 465 SDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIA 524
Query: 121 TPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAED 180
TPGRLIDVLENRYLV ++CTY+VLDEADRMIDMGFEPDVQKILE+MPV+N KPDT++AED
Sbjct: 525 TPGRLIDVLENRYLVPSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAED 584
Query: 181 ENKLLANYNS-KKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKK 239
K+LAN+ S K KYRQTVMFTATMPP
Sbjct: 585 PEKMLANFESGKHKYRQTVMFTATMPP--------------------------------- 611
Query: 240 KYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKKLME 299
AVERLARSYLRRPA VYIGS GKP ER+EQ V+++SE +KRKKL+
Sbjct: 612 --------------AVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLA 657
Query: 300 VLNRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDI 359
+L +G P+IIFVNQKKG DVLAK LEK+GYNACTLHGGKGQEQRE AL++LK G+KDI
Sbjct: 658 ILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDI 717
Query: 360 LMAGD 364
L+A D
Sbjct: 718 LVATD 722
>sp|Q1DMX8|PRP28_COCIM Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Coccidioides
immitis (strain RS) GN=PRP28 PE=3 SV=2
Length = 820
Score = 638 bits (1645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/701 (48%), Positives = 457/701 (65%), Gaps = 57/701 (8%)
Query: 479 GAAAKKEPLSLEELLAKKKAEEEARSKPKFLTKEERAAEALRKRQAEVEEMRK------- 531
G++ PLS+EELL KKK +EA S+PKFLTK +R AL KR E+E R+
Sbjct: 83 GSSKSTTPLSVEELLRKKKEADEAASRPKFLTKSQREKLALEKRAKEIEHERRIRAASTN 142
Query: 532 --KMEEERKKRQEFTKEASFESKRENFDARLR---------------------RDREKKK 568
M + AS ++ +N + R R + K
Sbjct: 143 GSMMSDSNGGGGNSNGRASPTTRYDNVNGSSRTSIPTAPRALRGEIPTAPAAMRSSQAKN 202
Query: 569 EDPEE-KELNKDKEREGEA-----------IKERYLGL-------VKKKRRVRRLNDRKF 609
DP ++ D GE ++RY+G KKKRR R +RKF
Sbjct: 203 NDPRPGNKVPSDSAATGEKRTAPEDAQALLTRQRYMGADQTSSFSAKKKRR--RTTERKF 260
Query: 610 VFDWDASEDTSVDYNSIYKERHQVQFFGRGNIAGIDIKAQKRDQSKFYGEMLEKRRTEAE 669
F+W+A EDTS DYN +Y+ R ++ FFGRG +AG +K Y + LE R EA
Sbjct: 261 NFEWNADEDTSPDYNPLYQNRSEMNFFGRGRLAGFSDDVVD-SAAKRYAKALEDRDLEAG 319
Query: 670 KEQEKVRLKKVKKREEKQKWD--DRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPV 727
+ + L+ ++R E+ + D HW++K LD+M ERDWRIF+ED++I+ KGG +P+P+
Sbjct: 320 SARAREILEMERRRREEGGRNGLDLHWSQKRLDQMRERDWRIFKEDFNISTKGGSIPNPM 379
Query: 728 RNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLL 787
R+W E+ LP +LEII+K+GY +P+PIQR AIPI LQNRD+IGVA TGSGKT AFLLPLL
Sbjct: 380 RSWGESGLPKRLLEIIDKVGYKDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLL 439
Query: 788 VWIQSLPKIARME-DADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSRE 846
V+I LP++ E GPYAII+APTRELAQQIE E KF PLG V +VGG S E
Sbjct: 440 VYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIENEARKFCNPLGFNVVSIVGGHSLE 499
Query: 847 EQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEY 906
EQ F LR G EI+IATPGRL+D +E R LVL+QC Y+++DEADRMID+GFE V KIL+
Sbjct: 500 EQSFSLRNGAEIIIATPGRLVDCIERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDA 559
Query: 907 MPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIG 966
+PV+N KPDTE+AED + + K +YRQT+M+TATMP AVER+AR YLRRPA V IG
Sbjct: 560 LPVSNEKPDTEEAEDARAMSQHLGGKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTIG 619
Query: 967 SVGKPTERIEQIVYILSEQDKRKK-LMEVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLG 1024
++G+ + +EQ V +S +DKRKK L ++L G + P+I+FVN K+ D +A+ ++++G
Sbjct: 620 NIGEAVDTVEQRVEFISGEDKRKKRLADILASGEFRPPIIVFVNIKRNCDAVARDIKQMG 679
Query: 1025 YNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDY 1084
Y++ TLHG K QEQRE AL S++ G+ D+LVATD+AGRGID+ DVS+V+N++MA +IE Y
Sbjct: 680 YSSVTLHGSKTQEQREAALASVRNGNTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESY 739
Query: 1085 THRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVT 1125
THRIGRTGRAGK G+A++F +D+ + YDLKQM++ S ++
Sbjct: 740 THRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMLMKSSIS 780
Score = 624 bits (1609), Expect = e-177, Method: Compositional matrix adjust.
Identities = 310/578 (53%), Positives = 414/578 (71%), Gaps = 15/578 (2%)
Query: 1263 KERYLGL-------VKKKRRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFGRGN 1315
++RY+G KKKRR R +RKF F+W+A EDTS DYN +Y+ R ++ FFGRG
Sbjct: 234 RQRYMGADQTSSFSAKKKRR--RTTERKFNFEWNADEDTSPDYNPLYQNRSEMNFFGRGR 291
Query: 1316 IAGIDIKAQKRDQSKFYGEMLEKRRTEAEKEQEKVRLKKVKKREEKQKWD--DRHWTEKS 1373
+AG +K Y + LE R EA + + L+ ++R E+ + D HW++K
Sbjct: 292 LAGFSDDVVD-SAAKRYAKALEDRDLEAGSARAREILEMERRRREEGGRNGLDLHWSQKR 350
Query: 1374 LDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQA 1433
LD+M ERDWRIF+ED++I+ KGG +P+P+R+W E+ LP +LEII+K+GY +P+PIQR A
Sbjct: 351 LDQMRERDWRIFKEDFNISTKGGSIPNPMRSWGESGLPKRLLEIIDKVGYKDPSPIQRAA 410
Query: 1434 IPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARME-DADQGPYAIIMAPTREL 1492
IPI LQNRD+IGVA TGSGKT AFLLPLLV+I LP++ E GPYAII+APTREL
Sbjct: 411 IPIALQNRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTREL 470
Query: 1493 AQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVL 1552
AQQIE E KF PLG V +VGG S EEQ F LR G EI+IATPGRL+D +E R LVL
Sbjct: 471 AQQIENEARKFCNPLGFNVVSIVGGHSLEEQSFSLRNGAEIIIATPGRLVDCIERRILVL 530
Query: 1553 NQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQ 1612
+QC Y+++DEADRMID+GFE V KIL+ +PV+N KPDTE+AED + + K +YRQ
Sbjct: 531 SQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDTEEAEDARAMSQHLGGKDRYRQ 590
Query: 1613 TVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKK-LMEVLN 1671
T+M+TATMP AVER+AR YLRRPA V IG++G+ + +EQ V +S +DKRKK L ++L
Sbjct: 591 TMMYTATMPSAVERIARKYLRRPAIVTIGNIGEAVDTVEQRVEFISGEDKRKKRLADILA 650
Query: 1672 RG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILV 1730
G + P+I+FVN K+ D +A+ ++++GY++ TLHG K QEQRE AL S++ G+ D+LV
Sbjct: 651 SGEFRPPIIVFVNIKRNCDAVARDIKQMGYSSVTLHGSKTQEQREAALASVRNGNTDVLV 710
Query: 1731 ATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDL 1790
ATD+AGRGID+ DVS+V+N++MA +IE YTHRIGRTGRAGK G+A++F +D+ + YDL
Sbjct: 711 ATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDL 770
Query: 1791 KQMMISSPVSTCPPELLNHPDAQHKPGTVMVPKKRREE 1828
KQM++ S +S P EL H AQ KP +KR +E
Sbjct: 771 KQMLMKSSISRVPEELRKHEAAQSKPTKAGGGQKRLDE 808
Score = 364 bits (934), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 188/371 (50%), Positives = 242/371 (65%), Gaps = 50/371 (13%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARME- 59
II+K+GY +P+PIQR AIPI LQNRD+IGVA TGSGKT AFLLPLLV+I LP++ E
Sbjct: 394 IIDKVGYKDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEW 453
Query: 60 DADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVI 119
GPYAII+APTRELAQQIE E KF PLG V +VGG S EEQ F LR G EI+I
Sbjct: 454 RKSDGPYAIILAPTRELAQQIENEARKFCNPLGFNVVSIVGGHSLEEQSFSLRNGAEIII 513
Query: 120 ATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAE 179
ATPGRL+D +E R LVL+QC Y+++DEADRMID+GFE V KIL+ +PV+N KPDTE+AE
Sbjct: 514 ATPGRLVDCIERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDTEEAE 573
Query: 180 DENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKK 239
D + + K +YRQT+M+TATMP
Sbjct: 574 DARAMSQHLGGKDRYRQTMMYTATMP---------------------------------- 599
Query: 240 KYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKK-LM 298
AVER+AR YLRRPA V IG++G+ + +EQ V +S +DKRKK L
Sbjct: 600 -------------SAVERIARKYLRRPAIVTIGNIGEAVDTVEQRVEFISGEDKRKKRLA 646
Query: 299 EVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSK 357
++L G + P+I+FVN K+ D +A+ ++++GY++ TLHG K QEQRE AL S++ G+
Sbjct: 647 DILASGEFRPPIIVFVNIKRNCDAVARDIKQMGYSSVTLHGSKTQEQREAALASVRNGNT 706
Query: 358 DILMAGDRRSR 368
D+L+A D R
Sbjct: 707 DVLVATDLAGR 717
>sp|Q5BCU6|PRP28_EMENI Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL
194 / M139) GN=prp28 PE=3 SV=2
Length = 782
Score = 634 bits (1635), Expect = e-180, Method: Compositional matrix adjust.
Identities = 340/680 (50%), Positives = 460/680 (67%), Gaps = 43/680 (6%)
Query: 486 PLSLEELLAKKKAEEEARSKPKFLTKEERAAEALRKRQAEVEEMRKK----------MEE 535
PLS+EEL+ KK+ + A ++PKF++K ER AL KR EV+ R++ M+
Sbjct: 70 PLSVEELVRKKREADAAAARPKFMSKAERERLALEKRAKEVDAQRRRTNGTPNGVDGMDL 129
Query: 536 ERKKRQEFTKEASFES------KRENFDA---------RLRRDREKKKEDPE-EKELNKD 579
+ R T S N D R R D K D + +K N++
Sbjct: 130 DTPSRGFRTPNGDSRSIPTGPRAMRNGDGPTPTGPAAMRSRNDSGTTKSDKKVDKRFNEE 189
Query: 580 KEREGEA--IKERYLGL-------VKKKRRVRRLNDRKFVFDWDASEDTSVDYNSIYKER 630
E +A IK+RY+G KKKR+ R DRKF F+W+A EDTS DYN +Y+ R
Sbjct: 190 DEAAAQAALIKQRYMGADQTSNFSAKKKRK--RTTDRKFNFEWNAEEDTSGDYNPLYQHR 247
Query: 631 HQVQFFGRGNIAGIDIKAQKRDQSKFYGEMLEKRRTEAE--KEQEKVRLKKVKKREEKQK 688
H+ FFGRG +AG +K Y + LE R EA + +E + +++ ++ E +
Sbjct: 248 HEANFFGRGRLAGFGDDVAD-SVAKKYAKALEDRDREAGSIRAREILEMERRRREESTRN 306
Query: 689 WDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGY 748
D+HW+EK L+ M ERDWRIF+ED++I KGG VP+P+R+W E+ LP +LE+++++GY
Sbjct: 307 QLDKHWSEKKLEHMRERDWRIFKEDFNIATKGGSVPNPMRSWDESGLPKRLLELVDRVGY 366
Query: 749 AEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARME-DADQGPY 807
EPTPIQR AIPI +Q+RD+IGVA TGSGKT AFLLPLL +I LP+I E + GPY
Sbjct: 367 KEPTPIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLCYIAELPRIDEFEWRKNDGPY 426
Query: 808 AIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLI 867
AI++APTRELAQQIE E KF PLG V +VGG S EEQ + LR G EI+IATPGRL+
Sbjct: 427 AIVLAPTRELAQQIEIEAKKFTEPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLV 486
Query: 868 DVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLA 927
D +E R LVL+QC Y+++DEADRMID+GFE V KIL+ +PVTN KPDTE+AED + +
Sbjct: 487 DCIERRMLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAEDSSAMSR 546
Query: 928 NYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDK 987
+ SK +YRQT+M+TATMP AVER+AR YLRRPA V IGS G+ + +EQ V +++ +DK
Sbjct: 547 HLGSKDRYRQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDK 606
Query: 988 RKK-LMEVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNS 1045
RKK L E+L+ G + P+I+FVN K+ D +A+ +++ G+++ TLHG K QEQRE AL S
Sbjct: 607 RKKRLGEILSSGDFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALAS 666
Query: 1046 LKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCT 1105
++ GS D+LVATD+AGRGID+ DVS+VIN++MA SIE YTHRIGRTGRAGK G+A++F
Sbjct: 667 VRNGSTDVLVATDLAGRGIDVPDVSLVINFNMATSIESYTHRIGRTGRAGKSGVAITFLG 726
Query: 1106 KDDSHLFYDLKQMMISSPVT 1125
+D+ + YDLKQM+I SP++
Sbjct: 727 NEDADVMYDLKQMLIKSPIS 746
Score = 630 bits (1626), Expect = e-179, Method: Compositional matrix adjust.
Identities = 318/583 (54%), Positives = 419/583 (71%), Gaps = 16/583 (2%)
Query: 1262 IKERYLGL-------VKKKRRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFGRG 1314
IK+RY+G KKKR+ R DRKF F+W+A EDTS DYN +Y+ RH+ FFGRG
Sbjct: 199 IKQRYMGADQTSNFSAKKKRK--RTTDRKFNFEWNAEEDTSGDYNPLYQHRHEANFFGRG 256
Query: 1315 NIAGIDIKAQKRDQSKFYGEMLEKRRTEAE--KEQEKVRLKKVKKREEKQKWDDRHWTEK 1372
+AG +K Y + LE R EA + +E + +++ ++ E + D+HW+EK
Sbjct: 257 RLAGFGDDVAD-SVAKKYAKALEDRDREAGSIRAREILEMERRRREESTRNQLDKHWSEK 315
Query: 1373 SLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQ 1432
L+ M ERDWRIF+ED++I KGG VP+P+R+W E+ LP +LE+++++GY EPTPIQR
Sbjct: 316 KLEHMRERDWRIFKEDFNIATKGGSVPNPMRSWDESGLPKRLLELVDRVGYKEPTPIQRA 375
Query: 1433 AIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARME-DADQGPYAIIMAPTRE 1491
AIPI +Q+RD+IGVA TGSGKT AFLLPLL +I LP+I E + GPYAI++APTRE
Sbjct: 376 AIPIAMQSRDLIGVAVTGSGKTAAFLLPLLCYIAELPRIDEFEWRKNDGPYAIVLAPTRE 435
Query: 1492 LAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLV 1551
LAQQIE E KF PLG V +VGG S EEQ + LR G EI+IATPGRL+D +E R LV
Sbjct: 436 LAQQIEIEAKKFTEPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRMLV 495
Query: 1552 LNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYR 1611
L+QC Y+++DEADRMID+GFE V KIL+ +PVTN KPDTE+AED + + + SK +YR
Sbjct: 496 LSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAEDSSAMSRHLGSKDRYR 555
Query: 1612 QTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKK-LMEVL 1670
QT+M+TATMP AVER+AR YLRRPA V IGS G+ + +EQ V +++ +DKRKK L E+L
Sbjct: 556 QTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKRLGEIL 615
Query: 1671 NRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDIL 1729
+ G + P+I+FVN K+ D +A+ +++ G+++ TLHG K QEQRE AL S++ GS D+L
Sbjct: 616 SSGDFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGSTDVL 675
Query: 1730 VATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYD 1789
VATD+AGRGID+ DVS+VIN++MA SIE YTHRIGRTGRAGK G+A++F +D+ + YD
Sbjct: 676 VATDLAGRGIDVPDVSLVINFNMATSIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYD 735
Query: 1790 LKQMMISSPVSTCPPELLNHPDAQHKPGTVMVPKKRREEKIFA 1832
LKQM+I SP+S P EL H AQ KP T KK E FA
Sbjct: 736 LKQMLIKSPISRVPEELRKHEAAQSKP-TRGAGKKIEEASGFA 777
Score = 360 bits (924), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 187/376 (49%), Positives = 245/376 (65%), Gaps = 50/376 (13%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARME- 59
+++++GY EPTPIQR AIPI +Q+RD+IGVA TGSGKT AFLLPLL +I LP+I E
Sbjct: 360 LVDRVGYKEPTPIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLCYIAELPRIDEFEW 419
Query: 60 DADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVI 119
+ GPYAI++APTRELAQQIE E KF PLG V +VGG S EEQ + LR G EI+I
Sbjct: 420 RKNDGPYAIVLAPTRELAQQIEIEAKKFTEPLGFNVVSIVGGHSFEEQAYSLRNGAEIII 479
Query: 120 ATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAE 179
ATPGRL+D +E R LVL+QC Y+++DEADRMID+GFE V KIL+ +PVTN KPDTE+AE
Sbjct: 480 ATPGRLVDCIERRMLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAE 539
Query: 180 DENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKK 239
D + + + SK +YRQT+M+TATMP
Sbjct: 540 DSSAMSRHLGSKDRYRQTMMYTATMP---------------------------------- 565
Query: 240 KYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKK-LM 298
AVER+AR YLRRPA V IGS G+ + +EQ V +++ +DKRKK L
Sbjct: 566 -------------TAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKRLG 612
Query: 299 EVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSK 357
E+L+ G + P+I+FVN K+ D +A+ +++ G+++ TLHG K QEQRE AL S++ GS
Sbjct: 613 EILSSGDFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGST 672
Query: 358 DILMAGDRRSRSRSPP 373
D+L+A D R P
Sbjct: 673 DVLVATDLAGRGIDVP 688
>sp|Q53RK8|RH21_ORYSJ DEAD-box ATP-dependent RNA helicase 21 OS=Oryza sativa subsp.
japonica GN=Os03g0708600 PE=2 SV=1
Length = 736
Score = 634 bits (1635), Expect = e-180, Method: Compositional matrix adjust.
Identities = 325/599 (54%), Positives = 421/599 (70%), Gaps = 19/599 (3%)
Query: 1243 EQDPEEKELNKDKEREGEAIKERYLGLVKKKRRVRRLNDR-KFVFDWDASEDTSVDYNSI 1301
E+D EK +++E+E +AIKE+YLG K K+RV + +++ +F FDW+ +EDTS D NS+
Sbjct: 146 EKDRLEKMAEREREKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNSL 205
Query: 1302 YKERHQVQF-FGRGNIAGIDIKAQKRDQSKFYGEMLEKRRTEA----EKEQEKVRLKKVK 1356
Y+ H+ + +GRG +AGID + QK+ + E ++R +A E + V K+
Sbjct: 206 YQSPHEARLLYGRGFLAGIDRREQKKVAAAHEKETRAEQRRKAGLDDRPEDDAVDKKEAD 265
Query: 1357 KREEKQKWD---DRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTE 1413
+ +D DRHWT+KSLDEMTERDWRIFRED++I+ KG KVP P+R W E+ L TE
Sbjct: 266 AAAKYDAFDMRVDRHWTQKSLDEMTERDWRIFREDFNISYKGSKVPRPMRKWSESKLGTE 325
Query: 1414 ILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIAR 1473
+L +EK GY EP+PIQ +IP+GLQ RD+IG+AETGSGKT AF+LP+L +I LP I+
Sbjct: 326 LLRAVEKAGYKEPSPIQMASIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPISE 385
Query: 1474 MEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEI 1533
E+ +GPYA++MAPTRELAQQIEEET KF T LGI+ V +VGG S EEQGF++R GCE+
Sbjct: 386 -ENEAEGPYAVVMAPTRELAQQIEEETVKFATYLGIKVVSIVGGQSIEEQGFKIRQGCEV 444
Query: 1534 VIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTED 1593
VIATPGRL+D LE RY VLNQC Y+VLDEADRMIDMGFEP V +L+ MP +NLKP+ ED
Sbjct: 445 VIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENED 504
Query: 1594 AEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQI 1653
E ++K YR T MF+ATMPPAVERLAR YLR P V IG+ GK T+ I Q
Sbjct: 505 EE--------LDAKTIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLITQN 556
Query: 1654 VYILSEQDKRKKLMEVLNRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQ 1713
V + E +K +L ++L KP I+F N KK AD AK L+K G+ TLHGGK QEQ
Sbjct: 557 VIMTKESEKMSRLQKILTDLGDKPAIVFCNTKKSADARAKDLDKAGFRVTTLHGGKSQEQ 616
Query: 1714 RELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEG 1773
RE +L+ + +LVATDVAGRGIDI DV+ VINY+M SI+ YTHRIGRTGRAGK+G
Sbjct: 617 RETSLDGFRNRRFTVLVATDVAGRGIDIPDVAHVINYEMPSSIDTYTHRIGRTGRAGKKG 676
Query: 1774 LAVSFCTKDDSHLFYDLKQMMISSPVSTCPPELLNHPDAQHKPGTVMVPKKRREEKIFA 1832
LA SF T +++ +F+DLKQM+I S S PPEL H ++ KPG+V RR + ++A
Sbjct: 677 LATSFLTLENTDIFFDLKQMLIQSN-SPVPPELARHEASKFKPGSVPDRPPRRNDTVYA 734
Score = 618 bits (1593), Expect = e-175, Method: Compositional matrix adjust.
Identities = 322/615 (52%), Positives = 415/615 (67%), Gaps = 53/615 (8%)
Query: 573 EKELNKDKEREGEAIKERYLGLVKKKRRVRRLNDR-KFVFDWDASEDTSVDYNSIYKERH 631
EK +++E+E +AIKE+YLG K K+RV + +++ +F FDW+ +EDTS D NS+Y+ H
Sbjct: 151 EKMAEREREKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNSLYQSPH 210
Query: 632 QVQF-FGRGNIAGIDIKAQKRDQSKFYGEMLEKRRTEA----EKEQEKVRLKKVKKREEK 686
+ + +GRG +AGID + QK+ + E ++R +A E + V K+ +
Sbjct: 211 EARLLYGRGFLAGIDRREQKKVAAAHEKETRAEQRRKAGLDDRPEDDAVDKKEADAAAKY 270
Query: 687 QKWD---DRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEII 743
+D DRHWT+KSLDEMTERDWRIFRED++I+ KG KVP P+R W E+ L TE+L +
Sbjct: 271 DAFDMRVDRHWTQKSLDEMTERDWRIFREDFNISYKGSKVPRPMRKWSESKLGTELLRAV 330
Query: 744 EKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDAD 803
EK GY EP+PIQ +IP+GLQ RD+IG+AETGSGKT AF+LP+L +I LP I+ E+
Sbjct: 331 EKAGYKEPSPIQMASIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPISE-ENEA 389
Query: 804 QGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATP 863
+GPYA++MAPTRELAQQIEEET KF T LGI+ V +VGG S EEQGF++R GCE+VIATP
Sbjct: 390 EGPYAVVMAPTRELAQQIEEETVKFATYLGIKVVSIVGGQSIEEQGFKIRQGCEVVIATP 449
Query: 864 GRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDEN 923
GRL+D LE RY VLNQC Y+VLDEADRMIDMGFEP V +L+ MP +NLKP+ ED E
Sbjct: 450 GRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--- 506
Query: 924 KLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILS 983
++K YR T MF+ATMPPAVERLAR YLR P V IG+ GK T+ I Q V +
Sbjct: 507 -----LDAKTIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLITQNVIMTK 561
Query: 984 EQDKRKKLMEVLNRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELAL 1043
E +K +L ++L KP I+F N KK AD AK L+K G+ TLHGGK QEQRE +L
Sbjct: 562 ESEKMSRLQKILTDLGDKPAIVFCNTKKSADARAKDLDKAGFRVTTLHGGKSQEQRETSL 621
Query: 1044 NSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSF 1103
+ + +LVATDVAGRGIDI DV+ VINY+M SI+ YTHRIGRTGRAGK+GLA SF
Sbjct: 622 DGFRNRRFTVLVATDVAGRGIDIPDVAHVINYEMPSSIDTYTHRIGRTGRAGKKGLATSF 681
Query: 1104 CTKDDSHLFYDLKQMMISSPVTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVSTCPP 1163
T +++ +F+DLKQM+I S +SPV PP
Sbjct: 682 LTLENTDIFFDLKQMLIQS--------------------------------NSPV---PP 706
Query: 1164 ELLNHPDAQHKPGTV 1178
EL H ++ KPG+V
Sbjct: 707 ELARHEASKFKPGSV 721
Score = 353 bits (906), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 186/372 (50%), Positives = 229/372 (61%), Gaps = 56/372 (15%)
Query: 2 IEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDA 61
+EK GY EP+PIQ +IP+GLQ RD+IG+AETGSGKT AF+LP+L +I LP I+ E+
Sbjct: 330 VEKAGYKEPSPIQMASIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPISE-ENE 388
Query: 62 DQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIAT 121
+GPYA++MAPTRELAQQIEEET KF T LGI+ V +VGG S EEQGF++R GCE+VIAT
Sbjct: 389 AEGPYAVVMAPTRELAQQIEEETVKFATYLGIKVVSIVGGQSIEEQGFKIRQGCEVVIAT 448
Query: 122 PGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDE 181
PGRL+D LE RY VLNQC Y+VLDEADRMIDMGFEP V +L+ MP +NLKP+ ED E
Sbjct: 449 PGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE-- 506
Query: 182 NKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKY 241
++K YR T MF+ATMPP
Sbjct: 507 ------LDAKTIYRTTYMFSATMPP----------------------------------- 525
Query: 242 RQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKKLMEVL 301
AVERLAR YLR P V IG+ GK T+ I Q V + E +K +L ++L
Sbjct: 526 ------------AVERLARKYLRNPVVVTIGTAGKATDLITQNVIMTKESEKMSRLQKIL 573
Query: 302 NRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILM 361
KP I+F N KK AD AK L+K G+ TLHGGK QEQRE +L+ + +L+
Sbjct: 574 TDLGDKPAIVFCNTKKSADARAKDLDKAGFRVTTLHGGKSQEQRETSLDGFRNRRFTVLV 633
Query: 362 AGDRRSRSRSPP 373
A D R P
Sbjct: 634 ATDVAGRGIDIP 645
>sp|A1CHL3|PRP28_ASPCL Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=prp28 PE=3 SV=1
Length = 798
Score = 631 bits (1628), Expect = e-179, Method: Compositional matrix adjust.
Identities = 331/694 (47%), Positives = 458/694 (65%), Gaps = 56/694 (8%)
Query: 482 AKKEPLSLEELLAKKKAEEEARSKPKFLTKEERAAEALRKRQAEVEEMRKKMEEERKKRQ 541
A PLS+EEL+ KK+ + A +KPKFL++ ER AL KR EV+ R+ E
Sbjct: 74 AAATPLSVEELVRKKREADAAAAKPKFLSRAERERLALEKRAKEVDADRRLKTERTANGA 133
Query: 542 EFTKEAS--FESKRENFDARL-------RRDREKKKEDPEEKELNK-------------- 578
+ + S +R N D R+ R+ E NK
Sbjct: 134 DSSSAQSTPVYPERPNSDKRVIPTGPRAMRNTEAPARSGPAATRNKNYDMTPPAPPKPMS 193
Query: 579 --------DKEREGE---------AIKERYLGLVK-----KKRRVRRLNDRKFVFDWDAS 616
D +R+ E IK+RY+G K K++ +R DRKF F+W+A
Sbjct: 194 FSLTDSKGDSKRQAEEDETVAQVALIKQRYMGEEKTSNFSAKKKRKRTTDRKFNFEWNAE 253
Query: 617 EDTSVDYNSIYKERHQVQFFGRGNIAGIDIKAQKRDQSKFYGEMLEKRRTEAE--KEQEK 674
EDTS DYN +Y+ RH+ F+GRG +AG +K Y LE R EA + +E
Sbjct: 254 EDTSGDYNPLYQHRHEANFYGRGRLAGFGDDVAD-SLAKKYARALEDRDQEAGSIRAREM 312
Query: 675 VRLKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEAS 734
+ ++K ++ E + D+HW+EK L+ M ERDWRIF+ED++I+ KGG VP+P+R+W+E+
Sbjct: 313 LEMEKRRREESTRNQLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWEESG 372
Query: 735 LPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLP 794
LP +LE+++++GY EPTPIQR AIPI LQ+RD+IGVA TGSGKT +FLLPLLV+I LP
Sbjct: 373 LPKRLLELVDRVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLVYIAELP 432
Query: 795 KIARME-DADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLR 853
+I E + GPYAI++APTRELAQQIE E KF PLG V +VGG S EEQ + LR
Sbjct: 433 RIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTQPLGFNVVSIVGGHSLEEQAYSLR 492
Query: 854 LGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLK 913
G EI+IATPGRL+D +E R LVL+QC YI++DEADRMID+GFE V KIL+ +PVTN K
Sbjct: 493 NGAEIIIATPGRLVDCIERRILVLSQCCYIIMDEADRMIDLGFEEPVNKILDALPVTNEK 552
Query: 914 PDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTE 973
PD+++AE+ + ++ +YRQT+M+TATMP AVER+AR YLRRPA V IGS G+ +
Sbjct: 553 PDSDEAENSAAMRSH-----RYRQTMMYTATMPSAVERIARKYLRRPAIVTIGSAGEAVD 607
Query: 974 RIEQIVYILSEQDKRKK-LMEVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLH 1031
+EQ V +++ +DKRKK L ++L+ G + P+I+FVN K+ D +A+ ++ +G+++ TLH
Sbjct: 608 TVEQRVELIAGEDKRKKRLADILSSGEFRPPIIVFVNIKRNCDAIAREIKHMGFSSVTLH 667
Query: 1032 GGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRT 1091
G K Q+QRE AL S++ GS D+LVATD+AGRGID+ DVS+V+N++MA SIE YTHRIGRT
Sbjct: 668 GSKTQDQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGRT 727
Query: 1092 GRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVT 1125
GRAGK G+A++F +D+ + YDLKQM++ SP++
Sbjct: 728 GRAGKSGVAITFLGNEDADVMYDLKQMLMKSPIS 761
Score = 630 bits (1624), Expect = e-179, Method: Compositional matrix adjust.
Identities = 321/660 (48%), Positives = 448/660 (67%), Gaps = 37/660 (5%)
Query: 1168 HPDAQHKPGTVMMAGDRRSR-SRSPARKRRSRSRDRDYDRRFKRKKSPQCEAQSSRFSAC 1226
+P+ + V+ G R R + +PAR + +R+++YD +P + FS
Sbjct: 144 YPERPNSDKRVIPTGPRAMRNTEAPARSGPAATRNKNYD------MTPPAPPKPMSFSLT 197
Query: 1227 SLPRSHKSSSLLSRYSEQDPEEKELNKDKEREGEAIKERYLGLVK-----KKRRVRRLND 1281
K R +E+D ++ IK+RY+G K K++ +R D
Sbjct: 198 DSKGDSK------RQAEEDETVAQV--------ALIKQRYMGEEKTSNFSAKKKRKRTTD 243
Query: 1282 RKFVFDWDASEDTSVDYNSIYKERHQVQFFGRGNIAGIDIKAQKRDQSKFYGEMLEKRRT 1341
RKF F+W+A EDTS DYN +Y+ RH+ F+GRG +AG +K Y LE R
Sbjct: 244 RKFNFEWNAEEDTSGDYNPLYQHRHEANFYGRGRLAGFGDDVAD-SLAKKYARALEDRDQ 302
Query: 1342 EAE--KEQEKVRLKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKVP 1399
EA + +E + ++K ++ E + D+HW+EK L+ M ERDWRIF+ED++I+ KGG VP
Sbjct: 303 EAGSIRAREMLEMEKRRREESTRNQLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGSVP 362
Query: 1400 DPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLL 1459
+P+R+W+E+ LP +LE+++++GY EPTPIQR AIPI LQ+RD+IGVA TGSGKT +FLL
Sbjct: 363 NPMRSWEESGLPKRLLELVDRVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLL 422
Query: 1460 PLLVWIQSLPKIARME-DADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGL 1518
PLLV+I LP+I E + GPYAI++APTRELAQQIE E KF PLG V +VGG
Sbjct: 423 PLLVYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTQPLGFNVVSIVGGH 482
Query: 1519 SREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKI 1578
S EEQ + LR G EI+IATPGRL+D +E R LVL+QC YI++DEADRMID+GFE V KI
Sbjct: 483 SLEEQAYSLRNGAEIIIATPGRLVDCIERRILVLSQCCYIIMDEADRMIDLGFEEPVNKI 542
Query: 1579 LEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATV 1638
L+ +PVTN KPD+++AE+ + ++ +YRQT+M+TATMP AVER+AR YLRRPA V
Sbjct: 543 LDALPVTNEKPDSDEAENSAAMRSH-----RYRQTMMYTATMPSAVERIARKYLRRPAIV 597
Query: 1639 YIGSVGKPTERIEQIVYILSEQDKRKK-LMEVLNRG-VKKPVIIFVNQKKGADVLAKGLE 1696
IGS G+ + +EQ V +++ +DKRKK L ++L+ G + P+I+FVN K+ D +A+ ++
Sbjct: 598 TIGSAGEAVDTVEQRVELIAGEDKRKKRLADILSSGEFRPPIIVFVNIKRNCDAIAREIK 657
Query: 1697 KLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSI 1756
+G+++ TLHG K Q+QRE AL S++ GS D+LVATD+AGRGID+ DVS+V+N++MA SI
Sbjct: 658 HMGFSSVTLHGSKTQDQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATSI 717
Query: 1757 EDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVSTCPPELLNHPDAQHKP 1816
E YTHRIGRTGRAGK G+A++F +D+ + YDLKQM++ SP+S P EL H AQ KP
Sbjct: 718 ESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMLMKSPISRVPEELRKHEAAQSKP 777
Score = 350 bits (899), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 181/371 (48%), Positives = 243/371 (65%), Gaps = 55/371 (14%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARME- 59
+++++GY EPTPIQR AIPI LQ+RD+IGVA TGSGKT +FLLPLLV+I LP+I E
Sbjct: 380 LVDRVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLVYIAELPRIDEFEW 439
Query: 60 DADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVI 119
+ GPYAI++APTRELAQQIE E KF PLG V +VGG S EEQ + LR G EI+I
Sbjct: 440 RKNDGPYAIVLAPTRELAQQIEIEAKKFTQPLGFNVVSIVGGHSLEEQAYSLRNGAEIII 499
Query: 120 ATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAE 179
ATPGRL+D +E R LVL+QC YI++DEADRMID+GFE V KIL+ +PVTN KPD+++AE
Sbjct: 500 ATPGRLVDCIERRILVLSQCCYIIMDEADRMIDLGFEEPVNKILDALPVTNEKPDSDEAE 559
Query: 180 DENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKK 239
+ + ++ +YRQT+M+TATMP
Sbjct: 560 NSAAMRSH-----RYRQTMMYTATMP---------------------------------- 580
Query: 240 KYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKK-LM 298
AVER+AR YLRRPA V IGS G+ + +EQ V +++ +DKRKK L
Sbjct: 581 -------------SAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVELIAGEDKRKKRLA 627
Query: 299 EVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSK 357
++L+ G + P+I+FVN K+ D +A+ ++ +G+++ TLHG K Q+QRE AL S++ GS
Sbjct: 628 DILSSGEFRPPIIVFVNIKRNCDAIAREIKHMGFSSVTLHGSKTQDQREAALASVRNGST 687
Query: 358 DILMAGDRRSR 368
D+L+A D R
Sbjct: 688 DVLVATDLAGR 698
>sp|A7EGG4|PRP28_SCLS1 Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Sclerotinia
sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=prp28
PE=3 SV=1
Length = 816
Score = 629 bits (1622), Expect = e-179, Method: Compositional matrix adjust.
Identities = 333/708 (47%), Positives = 455/708 (64%), Gaps = 68/708 (9%)
Query: 480 AAAKKEPLSLEELLAKKKAEEEARSKPKFLTKEERAAEALRKRQAEVEEMRKKMEEE--- 536
A K PLS+E++L KKK +EA +KPKFL+K R AL KR EVEE R+K E E
Sbjct: 76 GAPKPGPLSIEDILKKKKEADEAAAKPKFLSKAAREKLALEKRAKEVEEQRRKRESEQDN 135
Query: 537 ----------------------RKKRQEFTK-EASF-----ESKRENFDARLRRDREKKK 568
R +Q+ + ++SF + R R D+
Sbjct: 136 RIPVGTVNGNGYGAANGRDGYERSHQQDNARRDSSFVPTGPRAMRNGQQNRPSSDKPNDM 195
Query: 569 EDPE-------------------EKELNKDKEREGEAIKERYLGL--------VKKKRRV 601
E P EK ++ + I+ RY+G KKKRR
Sbjct: 196 EPPPKSAKPATTAAGSSKASVAGEKRPANAEDLQAALIRTRYMGAETNQSTFSAKKKRR- 254
Query: 602 RRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFGRGNIAGIDIKAQKRDQSKFYGEML 661
R ++KF F+W+A EDTS DYN IY+ R + +GRG +AG A+ + Y + L
Sbjct: 255 -RTTEKKFNFEWNAEEDTSPDYNPIYQNRAEAGLYGRGRLAGF---AEDEAATLKYAKAL 310
Query: 662 EKRRTEA--EKEQEKVRLKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIK 719
E+R EA + +E V +++ +K + + D+HW+EK L+ M ERDWRIF+ED++I+ K
Sbjct: 311 EERDIEAGSARAREIVEMERRRKEDAGRNSLDKHWSEKKLEHMRERDWRIFKEDFNISTK 370
Query: 720 GGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKT 779
GG +P+P+R+W E+ LP +L++I ++GY EP+ +QR AIPI LQ RD+IGVA TGSGKT
Sbjct: 371 GGAIPNPMRSWSESKLPKRLLDVINQVGYDEPSAVQRAAIPIALQARDLIGVAVTGSGKT 430
Query: 780 LAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLV 839
AFLLPLLV+I LP + D GPYAII+APTRELAQQIE E KF TPLG V +
Sbjct: 431 AAFLLPLLVYISELPPLNEFTKND-GPYAIILAPTRELAQQIEVEAKKFATPLGFTCVSI 489
Query: 840 VGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPD 899
VGG S EEQ + LR G EI+IATPGRL+D +E R LVL QC YI++DEADRMID+GFE
Sbjct: 490 VGGHSLEEQSYNLRNGAEIIIATPGRLVDCIERRVLVLGQCCYIIMDEADRMIDLGFEES 549
Query: 900 VQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRR 959
V KIL+ +PV+N KPDT+DAED + + K +YRQT+M+TATMPPAVE++A+ YLRR
Sbjct: 550 VNKILDALPVSNEKPDTDDAEDAQAMSRHLGGKDRYRQTMMYTATMPPAVEKIAKKYLRR 609
Query: 960 PATVYIGSVGKPTERIEQIVYILSEQDKRKK-LMEVLNRG-VKKPVIIFVNQKKGADVLA 1017
PA V IG++G+ E +EQ V ++ +DKRKK L E+L G + P+I+FVN K+ D +A
Sbjct: 610 PAIVTIGNIGEAVETVEQRVEFVAGEDKRKKRLNEILASGEFQPPIIVFVNIKRNCDAVA 669
Query: 1018 KGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDM 1077
+ ++ +G+ + TLHG K QEQRE AL S++ G+ ++LVATD+AGRGID+ DVS+V+N++M
Sbjct: 670 RDIKHMGFTSVTLHGSKTQEQREAALASVRSGATNVLVATDLAGRGIDVPDVSLVVNFNM 729
Query: 1078 AKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVT 1125
A +IE YTHRIGRTGRAGK G+A++F +D+ YDLKQM++ S ++
Sbjct: 730 ATNIESYTHRIGRTGRAGKSGVAITFLGNEDADTMYDLKQMLMKSSIS 777
Score = 615 bits (1586), Expect = e-174, Method: Compositional matrix adjust.
Identities = 299/566 (52%), Positives = 403/566 (71%), Gaps = 18/566 (3%)
Query: 1262 IKERYLGL--------VKKKRRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFGR 1313
I+ RY+G KKKRR R ++KF F+W+A EDTS DYN IY+ R + +GR
Sbjct: 233 IRTRYMGAETNQSTFSAKKKRR--RTTEKKFNFEWNAEEDTSPDYNPIYQNRAEAGLYGR 290
Query: 1314 GNIAGIDIKAQKRDQSKFYGEMLEKRRTEA--EKEQEKVRLKKVKKREEKQKWDDRHWTE 1371
G +AG A+ + Y + LE+R EA + +E V +++ +K + + D+HW+E
Sbjct: 291 GRLAGF---AEDEAATLKYAKALEERDIEAGSARAREIVEMERRRKEDAGRNSLDKHWSE 347
Query: 1372 KSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQR 1431
K L+ M ERDWRIF+ED++I+ KGG +P+P+R+W E+ LP +L++I ++GY EP+ +QR
Sbjct: 348 KKLEHMRERDWRIFKEDFNISTKGGAIPNPMRSWSESKLPKRLLDVINQVGYDEPSAVQR 407
Query: 1432 QAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRE 1491
AIPI LQ RD+IGVA TGSGKT AFLLPLLV+I LP + D GPYAII+APTRE
Sbjct: 408 AAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISELPPLNEFTKND-GPYAIILAPTRE 466
Query: 1492 LAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLV 1551
LAQQIE E KF TPLG V +VGG S EEQ + LR G EI+IATPGRL+D +E R LV
Sbjct: 467 LAQQIEVEAKKFATPLGFTCVSIVGGHSLEEQSYNLRNGAEIIIATPGRLVDCIERRVLV 526
Query: 1552 LNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYR 1611
L QC YI++DEADRMID+GFE V KIL+ +PV+N KPDT+DAED + + K +YR
Sbjct: 527 LGQCCYIIMDEADRMIDLGFEESVNKILDALPVSNEKPDTDDAEDAQAMSRHLGGKDRYR 586
Query: 1612 QTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKK-LMEVL 1670
QT+M+TATMPPAVE++A+ YLRRPA V IG++G+ E +EQ V ++ +DKRKK L E+L
Sbjct: 587 QTMMYTATMPPAVEKIAKKYLRRPAIVTIGNIGEAVETVEQRVEFVAGEDKRKKRLNEIL 646
Query: 1671 NRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDIL 1729
G + P+I+FVN K+ D +A+ ++ +G+ + TLHG K QEQRE AL S++ G+ ++L
Sbjct: 647 ASGEFQPPIIVFVNIKRNCDAVARDIKHMGFTSVTLHGSKTQEQREAALASVRSGATNVL 706
Query: 1730 VATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYD 1789
VATD+AGRGID+ DVS+V+N++MA +IE YTHRIGRTGRAGK G+A++F +D+ YD
Sbjct: 707 VATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGNEDADTMYD 766
Query: 1790 LKQMMISSPVSTCPPELLNHPDAQHK 1815
LKQM++ S +S P EL H AQ K
Sbjct: 767 LKQMLMKSSISRVPEELRKHEAAQQK 792
Score = 355 bits (912), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/375 (49%), Positives = 238/375 (63%), Gaps = 50/375 (13%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMED 60
+I ++GY EP+ +QR AIPI LQ RD+IGVA TGSGKT AFLLPLLV+I LP +
Sbjct: 393 VINQVGYDEPSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISELPPLNEFTK 452
Query: 61 ADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIA 120
D GPYAII+APTRELAQQIE E KF TPLG V +VGG S EEQ + LR G EI+IA
Sbjct: 453 ND-GPYAIILAPTRELAQQIEVEAKKFATPLGFTCVSIVGGHSLEEQSYNLRNGAEIIIA 511
Query: 121 TPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAED 180
TPGRL+D +E R LVL QC YI++DEADRMID+GFE V KIL+ +PV+N KPDT+DAED
Sbjct: 512 TPGRLVDCIERRVLVLGQCCYIIMDEADRMIDLGFEESVNKILDALPVSNEKPDTDDAED 571
Query: 181 ENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKK 240
+ + K +YRQT+M+TATMPP
Sbjct: 572 AQAMSRHLGGKDRYRQTMMYTATMPP---------------------------------- 597
Query: 241 YRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKK-LME 299
AVE++A+ YLRRPA V IG++G+ E +EQ V ++ +DKRKK L E
Sbjct: 598 -------------AVEKIAKKYLRRPAIVTIGNIGEAVETVEQRVEFVAGEDKRKKRLNE 644
Query: 300 VLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKD 358
+L G + P+I+FVN K+ D +A+ ++ +G+ + TLHG K QEQRE AL S++ G+ +
Sbjct: 645 ILASGEFQPPIIVFVNIKRNCDAVARDIKHMGFTSVTLHGSKTQEQREAALASVRSGATN 704
Query: 359 ILMAGDRRSRSRSPP 373
+L+A D R P
Sbjct: 705 VLVATDLAGRGIDVP 719
>sp|A1CX72|PRP28_NEOFI Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL
181) GN=prp28 PE=3 SV=1
Length = 796
Score = 626 bits (1614), Expect = e-178, Method: Compositional matrix adjust.
Identities = 334/693 (48%), Positives = 462/693 (66%), Gaps = 64/693 (9%)
Query: 486 PLSLEELLAKKKAEEEARSKPKFLTKEERAAEALRKRQAEVEEMRKKMEEERKKRQE--F 543
PLS+EEL+ KK+ + A +KPKFL+K ER AL KR EVE R+ E +
Sbjct: 78 PLSVEELVRKKREADAAAAKPKFLSKAERERIALEKRAKEVEAGRRFKSEPSTNGTDRSG 137
Query: 544 TKEASFESKRENFD-------ARLRRDREKKKEDPEEKELNKD--------------KER 582
T+ S S+ N D R R+ E + N D +
Sbjct: 138 TQSPSVYSETPNGDERSIPTGPRAMRNSEVPTGPAAMRNKNYDMSPPPPPKPMSFSLTDG 197
Query: 583 EGEA---------------IKERYLGLVK-----KKRRVRRLNDRKFVFDWDASEDTSVD 622
+G++ IK++Y+G K K++ +R DRKF F+W+A EDTS D
Sbjct: 198 KGDSKRQAEEDEAAAQAALIKQKYMGTEKTSSFSAKKKRKRTTDRKFNFEWNAEEDTSGD 257
Query: 623 YNSIYKERHQVQFFGRGNIAGI-----DIKAQKRDQSKFYGEMLEKRRTEAE--KEQEKV 675
YN +Y++RH+ F+GRG +AG D AQK Y LE R EA + +E +
Sbjct: 258 YNPLYQQRHEANFYGRGRLAGFGDDVADTLAQK------YARALEDRDREAGSIRAREIL 311
Query: 676 RLKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASL 735
+++ ++ E + D+HW+EK L+ M ERDWRIF+ED++I+ KGG VP+P+R+W+E+ L
Sbjct: 312 EMERRRREESTRNQLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWEESGL 371
Query: 736 PTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPK 795
P +LE+++++GY EPTPIQR AIPI LQ+RD+IGVA TGSGKT +FLLPLLV+I LP+
Sbjct: 372 PKRLLELVDQVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLVYISELPR 431
Query: 796 IARME-DADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRL 854
I E + GPYAI++APTRELAQQIE E KF PLG V +VGG S EEQ + LR
Sbjct: 432 IDEFEWRKNDGPYAIVLAPTRELAQQIEIEARKFTQPLGFNVVSIVGGHSFEEQAYSLRN 491
Query: 855 GCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKP 914
G EI+IATPGRL+D +E R LVL+QC Y+++DEADRMID+GFE V KIL+ +PVTN KP
Sbjct: 492 GAEIIIATPGRLVDCIERRLLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKP 551
Query: 915 DTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTER 974
DTE+AE+ + ++ +YRQT+M+TATMP AVER+AR YLRRPA V IGS G+ +
Sbjct: 552 DTEEAENSAAMRSH-----RYRQTMMYTATMPSAVERIARKYLRRPAIVTIGSAGEAVDT 606
Query: 975 IEQIVYILSEQDKRKK-LMEVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHG 1032
+EQ V +++ +DKRKK L ++L+ G + P+I+FVN K+ D +A+ ++++G+++ TLHG
Sbjct: 607 VEQRVEMIAGEDKRKKRLADILSSGEFRPPIIVFVNIKRNCDAIAREIKQMGFSSVTLHG 666
Query: 1033 GKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTG 1092
K QEQRE AL S++ GS D+LVATD+AGRGID+ DVS+V+N++MA SIE YTHRIGRTG
Sbjct: 667 SKTQEQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMANSIESYTHRIGRTG 726
Query: 1093 RAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVT 1125
RAGK G+A++F +D+ + YDLKQM++ SP++
Sbjct: 727 RAGKSGVAITFLGNEDADVMYDLKQMLMKSPIS 759
Score = 623 bits (1606), Expect = e-177, Method: Compositional matrix adjust.
Identities = 306/570 (53%), Positives = 417/570 (73%), Gaps = 26/570 (4%)
Query: 1262 IKERYLGLVK-----KKRRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFGRGNI 1316
IK++Y+G K K++ +R DRKF F+W+A EDTS DYN +Y++RH+ F+GRG +
Sbjct: 217 IKQKYMGTEKTSSFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQQRHEANFYGRGRL 276
Query: 1317 AGI-----DIKAQKRDQSKFYGEMLEKRRTEAE--KEQEKVRLKKVKKREEKQKWDDRHW 1369
AG D AQK Y LE R EA + +E + +++ ++ E + D+HW
Sbjct: 277 AGFGDDVADTLAQK------YARALEDRDREAGSIRAREILEMERRRREESTRNQLDKHW 330
Query: 1370 TEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPI 1429
+EK L+ M ERDWRIF+ED++I+ KGG VP+P+R+W+E+ LP +LE+++++GY EPTPI
Sbjct: 331 SEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWEESGLPKRLLELVDQVGYKEPTPI 390
Query: 1430 QRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARME-DADQGPYAIIMAP 1488
QR AIPI LQ+RD+IGVA TGSGKT +FLLPLLV+I LP+I E + GPYAI++AP
Sbjct: 391 QRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLVYISELPRIDEFEWRKNDGPYAIVLAP 450
Query: 1489 TRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENR 1548
TRELAQQIE E KF PLG V +VGG S EEQ + LR G EI+IATPGRL+D +E R
Sbjct: 451 TRELAQQIEIEARKFTQPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERR 510
Query: 1549 YLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKK 1608
LVL+QC Y+++DEADRMID+GFE V KIL+ +PVTN KPDTE+AE+ + ++
Sbjct: 511 LLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAENSAAMRSH----- 565
Query: 1609 KYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKK-LM 1667
+YRQT+M+TATMP AVER+AR YLRRPA V IGS G+ + +EQ V +++ +DKRKK L
Sbjct: 566 RYRQTMMYTATMPSAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKRLA 625
Query: 1668 EVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSK 1726
++L+ G + P+I+FVN K+ D +A+ ++++G+++ TLHG K QEQRE AL S++ GS
Sbjct: 626 DILSSGEFRPPIIVFVNIKRNCDAIAREIKQMGFSSVTLHGSKTQEQREAALASVRNGST 685
Query: 1727 DILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHL 1786
D+LVATD+AGRGID+ DVS+V+N++MA SIE YTHRIGRTGRAGK G+A++F +D+ +
Sbjct: 686 DVLVATDLAGRGIDVPDVSLVVNFNMANSIESYTHRIGRTGRAGKSGVAITFLGNEDADV 745
Query: 1787 FYDLKQMMISSPVSTCPPELLNHPDAQHKP 1816
YDLKQM++ SP+S P EL H AQ KP
Sbjct: 746 MYDLKQMLMKSPISRVPEELRKHEAAQSKP 775
Score = 352 bits (904), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 184/376 (48%), Positives = 245/376 (65%), Gaps = 55/376 (14%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARME- 59
+++++GY EPTPIQR AIPI LQ+RD+IGVA TGSGKT +FLLPLLV+I LP+I E
Sbjct: 378 LVDQVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLVYISELPRIDEFEW 437
Query: 60 DADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVI 119
+ GPYAI++APTRELAQQIE E KF PLG V +VGG S EEQ + LR G EI+I
Sbjct: 438 RKNDGPYAIVLAPTRELAQQIEIEARKFTQPLGFNVVSIVGGHSFEEQAYSLRNGAEIII 497
Query: 120 ATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAE 179
ATPGRL+D +E R LVL+QC Y+++DEADRMID+GFE V KIL+ +PVTN KPDTE+AE
Sbjct: 498 ATPGRLVDCIERRLLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAE 557
Query: 180 DENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKK 239
+ + ++ +YRQT+M+TATMP
Sbjct: 558 NSAAMRSH-----RYRQTMMYTATMP---------------------------------- 578
Query: 240 KYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKK-LM 298
AVER+AR YLRRPA V IGS G+ + +EQ V +++ +DKRKK L
Sbjct: 579 -------------SAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKRLA 625
Query: 299 EVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSK 357
++L+ G + P+I+FVN K+ D +A+ ++++G+++ TLHG K QEQRE AL S++ GS
Sbjct: 626 DILSSGEFRPPIIVFVNIKRNCDAIAREIKQMGFSSVTLHGSKTQEQREAALASVRNGST 685
Query: 358 DILMAGDRRSRSRSPP 373
D+L+A D R P
Sbjct: 686 DVLVATDLAGRGIDVP 701
>sp|A2QIL2|PRP28_ASPNC Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=prp28 PE=3 SV=1
Length = 810
Score = 623 bits (1607), Expect = e-177, Method: Compositional matrix adjust.
Identities = 330/695 (47%), Positives = 456/695 (65%), Gaps = 57/695 (8%)
Query: 486 PLSLEELLAKKKAEEEARSKPKFLTKEERAAEALRKRQAEVEEMRKKMEEERKK--RQEF 543
PLS+EEL+ KK+ + A +KPKFL+K+ER AL KR EV R+ E +
Sbjct: 81 PLSVEELVRKKREADAAAAKPKFLSKKEREKLALEKRAQEVAATRRLKSEHASNGVDRSA 140
Query: 544 TKEASFESKRENFDAR---------------------LRRDREKKKE-----DPEEKELN 577
T S S+ N DAR +R + K P K ++
Sbjct: 141 THSPSVSSEGPNGDARSIPTGPRAMRNSDAAPTAPAAMRHSQSHNKNYDLAPPPPPKSMS 200
Query: 578 ---------------KDKEREGEAIKERYLGL-----VKKKRRVRRLNDRKFVFDWDASE 617
+ + +K+RY+G K++ +R DRKF F+W+A E
Sbjct: 201 FGLTSGKGDSRFVDEDEAAAQAALVKQRYMGADQTSNFSAKKKRKRTTDRKFNFEWNAEE 260
Query: 618 DTSVDYNSIYKERHQVQFFGRGNIAGIDIKAQKRDQSKFYGEMLEKRRTEAE--KEQEKV 675
DTS DYN +Y+ RH+ FFGRG +AG + K Y LE R EA + +E +
Sbjct: 261 DTSGDYNPLYQHRHETNFFGRGRLAGFGDDVAESVAHK-YARALEDRDREAGSIRAREIL 319
Query: 676 RLKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASL 735
+++ ++ E + D+HW+EK L+ M ERDWRIF+ED++I+ KGG VP+P+R+W E++L
Sbjct: 320 EMERRRREESTRNQLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWDESNL 379
Query: 736 PTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPK 795
P ++E+I ++GY EPTPIQR AIPI +QNRD+IGVA TGSGKT AFLLPLL +I LP+
Sbjct: 380 PKRLMELINRVGYKEPTPIQRAAIPIAMQNRDLIGVAVTGSGKTAAFLLPLLCYIAELPR 439
Query: 796 IARME--DADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLR 853
I E AD GPYAI++APTRELAQQIE E KF PLG V +VGG S EEQ + LR
Sbjct: 440 IDEFEWRKAD-GPYAIVLAPTRELAQQIEIEAKKFTGPLGFNVVSIVGGHSLEEQAYSLR 498
Query: 854 LGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLK 913
G EI+IATPGRL+D +E R LVL+QC Y+++DEADRMID+GFE V KIL+ +PV+N K
Sbjct: 499 DGAEIIIATPGRLVDCIERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEK 558
Query: 914 PDTEDAEDENKLLANYNS-KKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPT 972
PD+EDAE+ + + N + +YRQT+M+TATMP AVER+AR YLRRPA V IGS G+
Sbjct: 559 PDSEDAENPLAMSRHINHDQHRYRQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAV 618
Query: 973 ERIEQIVYILSEQDKRKK-LMEVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTL 1030
+ +EQ V +++ +DKRKK L ++L+ G + P+I+FVN K+ D +A+ +++ G+++ TL
Sbjct: 619 DTVEQRVEMIAGEDKRKKRLGDILSSGEFRAPIIVFVNIKRNCDAIAREIKQWGFSSVTL 678
Query: 1031 HGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGR 1090
HG K Q+QRE AL S++ G+ D+LVATD+AGRGID+ DVS+V+N++MA SIE YTHRIGR
Sbjct: 679 HGSKTQDQREAALASVRNGTTDVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGR 738
Query: 1091 TGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVT 1125
TGRAGK G+A++F +D+ + YDLKQM++ SP++
Sbjct: 739 TGRAGKSGVAITFLGNEDADVMYDLKQMLMKSPIS 773
Score = 618 bits (1594), Expect = e-175, Method: Compositional matrix adjust.
Identities = 317/639 (49%), Positives = 438/639 (68%), Gaps = 35/639 (5%)
Query: 1190 SPARKRRSRSRDRDYDRRFKRKKSPQCEAQSSRFSACSLPRSHKSSSLLSRYSEQDPEEK 1249
+PA R S+S +++YD +P +S F S SR+ ++D
Sbjct: 174 APAAMRHSQSHNKNYDL------APPPPPKSMSFGLTS-------GKGDSRFVDED---- 216
Query: 1250 ELNKDKEREGEAIKERYLGL-----VKKKRRVRRLNDRKFVFDWDASEDTSVDYNSIYKE 1304
+ + +K+RY+G K++ +R DRKF F+W+A EDTS DYN +Y+
Sbjct: 217 ----EAAAQAALVKQRYMGADQTSNFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQH 272
Query: 1305 RHQVQFFGRGNIAGIDIKAQKRDQSKFYGEMLEKRRTEAE--KEQEKVRLKKVKKREEKQ 1362
RH+ FFGRG +AG + K Y LE R EA + +E + +++ ++ E +
Sbjct: 273 RHETNFFGRGRLAGFGDDVAESVAHK-YARALEDRDREAGSIRAREILEMERRRREESTR 331
Query: 1363 KWDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIG 1422
D+HW+EK L+ M ERDWRIF+ED++I+ KGG VP+P+R+W E++LP ++E+I ++G
Sbjct: 332 NQLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWDESNLPKRLMELINRVG 391
Query: 1423 YAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARME--DADQG 1480
Y EPTPIQR AIPI +QNRD+IGVA TGSGKT AFLLPLL +I LP+I E AD G
Sbjct: 392 YKEPTPIQRAAIPIAMQNRDLIGVAVTGSGKTAAFLLPLLCYIAELPRIDEFEWRKAD-G 450
Query: 1481 PYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGR 1540
PYAI++APTRELAQQIE E KF PLG V +VGG S EEQ + LR G EI+IATPGR
Sbjct: 451 PYAIVLAPTRELAQQIEIEAKKFTGPLGFNVVSIVGGHSLEEQAYSLRDGAEIIIATPGR 510
Query: 1541 LIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKL 1600
L+D +E R LVL+QC Y+++DEADRMID+GFE V KIL+ +PV+N KPD+EDAE+ +
Sbjct: 511 LVDCIERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSEDAENPLAM 570
Query: 1601 LANYNS-KKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSE 1659
+ N + +YRQT+M+TATMP AVER+AR YLRRPA V IGS G+ + +EQ V +++
Sbjct: 571 SRHINHDQHRYRQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAG 630
Query: 1660 QDKRKK-LMEVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELA 1717
+DKRKK L ++L+ G + P+I+FVN K+ D +A+ +++ G+++ TLHG K Q+QRE A
Sbjct: 631 EDKRKKRLGDILSSGEFRAPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQDQREAA 690
Query: 1718 LNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVS 1777
L S++ G+ D+LVATD+AGRGID+ DVS+V+N++MA SIE YTHRIGRTGRAGK G+A++
Sbjct: 691 LASVRNGTTDVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGRTGRAGKSGVAIT 750
Query: 1778 FCTKDDSHLFYDLKQMMISSPVSTCPPELLNHPDAQHKP 1816
F +D+ + YDLKQM++ SP+S P EL H AQ KP
Sbjct: 751 FLGNEDADVMYDLKQMLMKSPISRVPEELRKHEAAQSKP 789
Score = 350 bits (897), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 184/373 (49%), Positives = 243/373 (65%), Gaps = 53/373 (14%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARME- 59
+I ++GY EPTPIQR AIPI +QNRD+IGVA TGSGKT AFLLPLL +I LP+I E
Sbjct: 386 LINRVGYKEPTPIQRAAIPIAMQNRDLIGVAVTGSGKTAAFLLPLLCYIAELPRIDEFEW 445
Query: 60 -DADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIV 118
AD GPYAI++APTRELAQQIE E KF PLG V +VGG S EEQ + LR G EI+
Sbjct: 446 RKAD-GPYAIVLAPTRELAQQIEIEAKKFTGPLGFNVVSIVGGHSLEEQAYSLRDGAEII 504
Query: 119 IATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDA 178
IATPGRL+D +E R LVL+QC Y+++DEADRMID+GFE V KIL+ +PV+N KPD+EDA
Sbjct: 505 IATPGRLVDCIERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSEDA 564
Query: 179 EDENKLLANYNS-KKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNS 237
E+ + + N + +YRQT+M+TATMP
Sbjct: 565 ENPLAMSRHINHDQHRYRQTMMYTATMP-------------------------------- 592
Query: 238 KKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKK- 296
AVER+AR YLRRPA V IGS G+ + +EQ V +++ +DKRKK
Sbjct: 593 ---------------TAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKR 637
Query: 297 LMEVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGG 355
L ++L+ G + P+I+FVN K+ D +A+ +++ G+++ TLHG K Q+QRE AL S++ G
Sbjct: 638 LGDILSSGEFRAPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQDQREAALASVRNG 697
Query: 356 SKDILMAGDRRSR 368
+ D+L+A D R
Sbjct: 698 TTDVLVATDLAGR 710
>sp|Q4WPE9|PRP28_ASPFU Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=prp28 PE=3 SV=1
Length = 796
Score = 621 bits (1602), Expect = e-176, Method: Compositional matrix adjust.
Identities = 306/570 (53%), Positives = 417/570 (73%), Gaps = 26/570 (4%)
Query: 1262 IKERYLGLVK-----KKRRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFGRGNI 1316
IK++Y+G K K++ +R DRKF F+W+A EDTS DYN +Y++RH+ F+GRG +
Sbjct: 217 IKQKYMGTEKTSSFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQQRHEANFYGRGRL 276
Query: 1317 AGI-----DIKAQKRDQSKFYGEMLEKRRTEAE--KEQEKVRLKKVKKREEKQKWDDRHW 1369
AG D AQK Y LE R EA + +E + +++ ++ E + D+HW
Sbjct: 277 AGFGDDVADTLAQK------YARALEDRDREAGSIRAREILEMERRRREESTRNQLDKHW 330
Query: 1370 TEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPI 1429
+EK L+ M ERDWRIF+ED++I+ KGG VP+P+R+W+E+ LP +LE+++++GY EPTPI
Sbjct: 331 SEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWEESGLPKRLLELVDQVGYKEPTPI 390
Query: 1430 QRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARME-DADQGPYAIIMAP 1488
QR AIPI LQ+RD+IGVA TGSGKT +FLLPLLV+I LP+I E + GPYAI++AP
Sbjct: 391 QRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLVYISELPRIDEFEWRKNDGPYAIVLAP 450
Query: 1489 TRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENR 1548
TRELAQQIE E KF PLG V +VGG S EEQ + LR G EI+IATPGRL+D +E R
Sbjct: 451 TRELAQQIEIEARKFTQPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERR 510
Query: 1549 YLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKK 1608
LVL+QC Y+++DEADRMID+GFE V KIL+ +PVTN KPDTE+AE+ + ++
Sbjct: 511 LLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAENSAAMRSH----- 565
Query: 1609 KYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKK-LM 1667
+YRQT+M+TATMP AVER+AR YLRRPA V IGS G+ + +EQ V +++ +DKRKK L
Sbjct: 566 RYRQTMMYTATMPSAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKRLA 625
Query: 1668 EVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSK 1726
++L+ G + P+I+FVN K+ D +A+ ++++G+++ TLHG K QEQRE AL S++ GS
Sbjct: 626 DILSSGEFRPPIIVFVNIKRNCDAIAREIKQMGFSSVTLHGSKTQEQREAALASVRNGST 685
Query: 1727 DILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHL 1786
D+LVATD+AGRGID+ DVS+V+N++MA SIE YTHRIGRTGRAGK G+A++F +D+ +
Sbjct: 686 DVLVATDLAGRGIDVPDVSLVVNFNMANSIESYTHRIGRTGRAGKSGVAITFLGNEDADV 745
Query: 1787 FYDLKQMMISSPVSTCPPELLNHPDAQHKP 1816
YDLKQM++ SP+S P EL H AQ KP
Sbjct: 746 MYDLKQMLMKSPISRVPEELRKHEAAQSKP 775
Score = 607 bits (1565), Expect = e-172, Method: Compositional matrix adjust.
Identities = 297/554 (53%), Positives = 409/554 (73%), Gaps = 26/554 (4%)
Query: 587 IKERYLGLVK-----KKRRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFGRGNI 641
IK++Y+G K K++ +R DRKF F+W+A EDTS DYN +Y++RH+ F+GRG +
Sbjct: 217 IKQKYMGTEKTSSFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQQRHEANFYGRGRL 276
Query: 642 AGI-----DIKAQKRDQSKFYGEMLEKRRTEAE--KEQEKVRLKKVKKREEKQKWDDRHW 694
AG D AQK Y LE R EA + +E + +++ ++ E + D+HW
Sbjct: 277 AGFGDDVADTLAQK------YARALEDRDREAGSIRAREILEMERRRREESTRNQLDKHW 330
Query: 695 TEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPI 754
+EK L+ M ERDWRIF+ED++I+ KGG VP+P+R+W+E+ LP +LE+++++GY EPTPI
Sbjct: 331 SEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWEESGLPKRLLELVDQVGYKEPTPI 390
Query: 755 QRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARME-DADQGPYAIIMAP 813
QR AIPI LQ+RD+IGVA TGSGKT +FLLPLLV+I LP+I E + GPYAI++AP
Sbjct: 391 QRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLVYISELPRIDEFEWRKNDGPYAIVLAP 450
Query: 814 TRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENR 873
TRELAQQIE E KF PLG V +VGG S EEQ + LR G EI+IATPGRL+D +E R
Sbjct: 451 TRELAQQIEIEARKFTQPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERR 510
Query: 874 YLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKK 933
LVL+QC Y+++DEADRMID+GFE V KIL+ +PVTN KPDTE+AE+ + ++
Sbjct: 511 LLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAENSAAMRSH----- 565
Query: 934 KYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKK-LM 992
+YRQT+M+TATMP AVER+AR YLRRPA V IGS G+ + +EQ V +++ +DKRKK L
Sbjct: 566 RYRQTMMYTATMPSAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKRLA 625
Query: 993 EVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSK 1051
++L+ G + P+I+FVN K+ D +A+ ++++G+++ TLHG K QEQRE AL S++ GS
Sbjct: 626 DILSSGEFRPPIIVFVNIKRNCDAIAREIKQMGFSSVTLHGSKTQEQREAALASVRNGST 685
Query: 1052 DILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHL 1111
D+LVATD+AGRGID+ DVS+V+N++MA SIE YTHRIGRTGRAGK G+A++F +D+ +
Sbjct: 686 DVLVATDLAGRGIDVPDVSLVVNFNMANSIESYTHRIGRTGRAGKSGVAITFLGNEDADV 745
Query: 1112 FYDLKQMMISSPVT 1125
YDLKQM++ SP++
Sbjct: 746 MYDLKQMLMKSPIS 759
Score = 351 bits (901), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 183/371 (49%), Positives = 244/371 (65%), Gaps = 55/371 (14%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARME- 59
+++++GY EPTPIQR AIPI LQ+RD+IGVA TGSGKT +FLLPLLV+I LP+I E
Sbjct: 378 LVDQVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLVYISELPRIDEFEW 437
Query: 60 DADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVI 119
+ GPYAI++APTRELAQQIE E KF PLG V +VGG S EEQ + LR G EI+I
Sbjct: 438 RKNDGPYAIVLAPTRELAQQIEIEARKFTQPLGFNVVSIVGGHSFEEQAYSLRNGAEIII 497
Query: 120 ATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAE 179
ATPGRL+D +E R LVL+QC Y+++DEADRMID+GFE V KIL+ +PVTN KPDTE+AE
Sbjct: 498 ATPGRLVDCIERRLLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAE 557
Query: 180 DENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKK 239
+ + ++ +YRQT+M+TATMP
Sbjct: 558 NSAAMRSH-----RYRQTMMYTATMP---------------------------------- 578
Query: 240 KYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKK-LM 298
AVER+AR YLRRPA V IGS G+ + +EQ V +++ +DKRKK L
Sbjct: 579 -------------SAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKRLA 625
Query: 299 EVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSK 357
++L+ G + P+I+FVN K+ D +A+ ++++G+++ TLHG K QEQRE AL S++ GS
Sbjct: 626 DILSSGEFRPPIIVFVNIKRNCDAIAREIKQMGFSSVTLHGSKTQEQREAALASVRNGST 685
Query: 358 DILMAGDRRSR 368
D+L+A D R
Sbjct: 686 DVLVATDLAGR 696
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 486 PLSLEELLAKKKAEEEARSKPKFLTKEERAAEALRKRQAEVEEMRK 531
PLS+EEL+ KK+ + A +KPKFL+K ER AL KR EVE R+
Sbjct: 78 PLSVEELVRKKREADAAAAKPKFLSKAERERIALEKRAKEVEAGRR 123
>sp|Q2UH00|PRP28_ASPOR Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=prp28 PE=3 SV=1
Length = 803
Score = 618 bits (1593), Expect = e-175, Method: Compositional matrix adjust.
Identities = 327/700 (46%), Positives = 456/700 (65%), Gaps = 55/700 (7%)
Query: 479 GAAAKK---EPLSLEELLAKKKAEEEARSKPKFLTKEERAAEALRKRQAEVEEMRKKMEE 535
G AKK PLS+EEL+ KK+ + A ++PKFL++ ER AL KR EVE R+ ++
Sbjct: 70 GWGAKKPAATPLSVEELVRKKREADAAAARPKFLSRAERERIALEKRAKEVEAERR-LKA 128
Query: 536 ERKKRQEFTKEASFESKRENFDAR--------------------LRRDREKKK------- 568
+ T+ S S+ + D R +R K
Sbjct: 129 SNGVDRSATQSPSVSSEVNHSDGRTIPTGPRAMRSSDTPTAPAAMRNSHSHNKNRDLSPP 188
Query: 569 -----------EDPEEKELNKDKEREGEA--IKERYLG-----LVKKKRRVRRLNDRKFV 610
+K D E + +K+RY+G K++ +R DRKF
Sbjct: 189 PPPKSMSFGLASSKGDKRPVDDDEVAAQVALVKQRYMGADQTSTFSAKKKRKRTTDRKFN 248
Query: 611 FDWDASEDTSVDYNSIYKERHQVQFFGRGNIAGIDIKAQKRDQSKFYGEMLEKRRTEAE- 669
F+W+A EDTS DYN +Y+ RH+ FFGRG +AG + +K Y LE R EA
Sbjct: 249 FEWNAEEDTSGDYNPLYQHRHEANFFGRGRLAGFGDDVAD-NVAKKYARALEDRDHEAGG 307
Query: 670 -KEQEKVRLKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVR 728
+ +E + +++ ++ E + D+HW+EK L+ M ERDWRIF+ED++I+ KGG VP+P+R
Sbjct: 308 IRAREILEMERRRREESTRNQLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMR 367
Query: 729 NWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLV 788
+W E+ LP ++E++ K+GY EPTPIQR AIPI +Q+RD+IGVA TGSGKT +FLLPLLV
Sbjct: 368 SWDESGLPKRLMELVNKVGYKEPTPIQRAAIPIAMQSRDLIGVAVTGSGKTASFLLPLLV 427
Query: 789 WIQSLPKIARME-DADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREE 847
+I LP+I E + GPYAI++APTRELAQQIE E KF PLG V +VGG S EE
Sbjct: 428 YIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTEPLGFNVVSIVGGHSFEE 487
Query: 848 QGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYM 907
Q + LR G EI+IATPGRL+D +E R LVL+QC Y+++DEADRMID+GFE V KIL+ +
Sbjct: 488 QAYSLRNGAEIIIATPGRLVDCIERRMLVLSQCCYVIMDEADRMIDLGFEEPVNKILDAL 547
Query: 908 PVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGS 967
PV+N KPD+E+AE+ + + +K +YRQT+M+TATMP AVER+AR YLRRPA V IGS
Sbjct: 548 PVSNEKPDSEEAENSMAMSQHIGTKDRYRQTMMYTATMPTAVERIARKYLRRPAIVTIGS 607
Query: 968 VGKPTERIEQIVYILSEQDKRKK-LMEVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGY 1025
G+ + +EQ V ++ +DKRKK L ++L+ G + P+I+FVN K+ D +A+ +++ G+
Sbjct: 608 AGEAVDTVEQRVEFIAGEDKRKKRLGDILSSGEFRPPIIVFVNIKRNCDAIAREIKQWGF 667
Query: 1026 NACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYT 1085
++ TLHG K QEQRE AL S++ G D+LVATD+AGRGID+ DVS+VIN++MA +IE YT
Sbjct: 668 SSVTLHGSKTQEQREAALASVRNGQTDVLVATDLAGRGIDVPDVSLVINFNMATTIESYT 727
Query: 1086 HRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVT 1125
HRIGRTGRAGK G+A++F +D+ + YDLKQM++ S ++
Sbjct: 728 HRIGRTGRAGKSGVAITFLGNEDTDVMYDLKQMIMKSSIS 767
Score = 617 bits (1591), Expect = e-175, Method: Compositional matrix adjust.
Identities = 299/565 (52%), Positives = 409/565 (72%), Gaps = 11/565 (1%)
Query: 1262 IKERYLG-----LVKKKRRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFGRGNI 1316
+K+RY+G K++ +R DRKF F+W+A EDTS DYN +Y+ RH+ FFGRG +
Sbjct: 220 VKQRYMGADQTSTFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQHRHEANFFGRGRL 279
Query: 1317 AGIDIKAQKRDQSKFYGEMLEKRRTEAE--KEQEKVRLKKVKKREEKQKWDDRHWTEKSL 1374
AG + +K Y LE R EA + +E + +++ ++ E + D+HW+EK L
Sbjct: 280 AGFGDDVAD-NVAKKYARALEDRDHEAGGIRAREILEMERRRREESTRNQLDKHWSEKKL 338
Query: 1375 DEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAI 1434
+ M ERDWRIF+ED++I+ KGG VP+P+R+W E+ LP ++E++ K+GY EPTPIQR AI
Sbjct: 339 EHMRERDWRIFKEDFNISTKGGSVPNPMRSWDESGLPKRLMELVNKVGYKEPTPIQRAAI 398
Query: 1435 PIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARME-DADQGPYAIIMAPTRELA 1493
PI +Q+RD+IGVA TGSGKT +FLLPLLV+I LP+I E + GPYAI++APTRELA
Sbjct: 399 PIAMQSRDLIGVAVTGSGKTASFLLPLLVYIAELPRIDEFEWRKNDGPYAIVLAPTRELA 458
Query: 1494 QQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLN 1553
QQIE E KF PLG V +VGG S EEQ + LR G EI+IATPGRL+D +E R LVL+
Sbjct: 459 QQIEIEAKKFTEPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRMLVLS 518
Query: 1554 QCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQT 1613
QC Y+++DEADRMID+GFE V KIL+ +PV+N KPD+E+AE+ + + +K +YRQT
Sbjct: 519 QCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSEEAENSMAMSQHIGTKDRYRQT 578
Query: 1614 VMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKK-LMEVLNR 1672
+M+TATMP AVER+AR YLRRPA V IGS G+ + +EQ V ++ +DKRKK L ++L+
Sbjct: 579 MMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEFIAGEDKRKKRLGDILSS 638
Query: 1673 G-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVA 1731
G + P+I+FVN K+ D +A+ +++ G+++ TLHG K QEQRE AL S++ G D+LVA
Sbjct: 639 GEFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGQTDVLVA 698
Query: 1732 TDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLK 1791
TD+AGRGID+ DVS+VIN++MA +IE YTHRIGRTGRAGK G+A++F +D+ + YDLK
Sbjct: 699 TDLAGRGIDVPDVSLVINFNMATTIESYTHRIGRTGRAGKSGVAITFLGNEDTDVMYDLK 758
Query: 1792 QMMISSPVSTCPPELLNHPDAQHKP 1816
QM++ S +S P EL H AQ KP
Sbjct: 759 QMIMKSSISRLPEELRKHEAAQSKP 783
Score = 353 bits (906), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 182/376 (48%), Positives = 242/376 (64%), Gaps = 50/376 (13%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARME- 59
++ K+GY EPTPIQR AIPI +Q+RD+IGVA TGSGKT +FLLPLLV+I LP+I E
Sbjct: 381 LVNKVGYKEPTPIQRAAIPIAMQSRDLIGVAVTGSGKTASFLLPLLVYIAELPRIDEFEW 440
Query: 60 DADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVI 119
+ GPYAI++APTRELAQQIE E KF PLG V +VGG S EEQ + LR G EI+I
Sbjct: 441 RKNDGPYAIVLAPTRELAQQIEIEAKKFTEPLGFNVVSIVGGHSFEEQAYSLRNGAEIII 500
Query: 120 ATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAE 179
ATPGRL+D +E R LVL+QC Y+++DEADRMID+GFE V KIL+ +PV+N KPD+E+AE
Sbjct: 501 ATPGRLVDCIERRMLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSEEAE 560
Query: 180 DENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKK 239
+ + + +K +YRQT+M+TATMP
Sbjct: 561 NSMAMSQHIGTKDRYRQTMMYTATMP---------------------------------- 586
Query: 240 KYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKK-LM 298
AVER+AR YLRRPA V IGS G+ + +EQ V ++ +DKRKK L
Sbjct: 587 -------------TAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEFIAGEDKRKKRLG 633
Query: 299 EVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSK 357
++L+ G + P+I+FVN K+ D +A+ +++ G+++ TLHG K QEQRE AL S++ G
Sbjct: 634 DILSSGEFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGQT 693
Query: 358 DILMAGDRRSRSRSPP 373
D+L+A D R P
Sbjct: 694 DVLVATDLAGRGIDVP 709
>sp|Q0CLX0|PRP28_ASPTN Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=prp28 PE=3 SV=1
Length = 783
Score = 617 bits (1592), Expect = e-175, Method: Compositional matrix adjust.
Identities = 327/681 (48%), Positives = 452/681 (66%), Gaps = 44/681 (6%)
Query: 486 PLSLEELLAKKKAEEEARSKPKFLTKEERAAEALRKRQAEVEEMRKK-----------ME 534
PLS+EEL+ KK+ + A +KPKFL+K+ER AL KR EVE+ R+K +
Sbjct: 70 PLSVEELVRKKREADAAAAKPKFLSKKEREKIALEKRAKEVEQSRRKTSTNGASDTASVR 129
Query: 535 EERKKRQEFTKEASFES-------------KRENFDARLRRDREKKKEDPEEKELNKDKE 581
E + AS + R D+ + +++D+
Sbjct: 130 SESATPNGVDRTASIPTGPRAMRTSEAPPPPRPRHDSSSNGNGNSNSNSNSNGTVDEDEA 189
Query: 582 REGEA-IKERYLGL-------VKKKRRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQV 633
A +K+RY+G KKKR+ R DRKF F+W+A EDTS DYN +Y +RH+
Sbjct: 190 AAQAALVKQRYMGAEMTSSFSAKKKRK--RTTDRKFNFEWNAEEDTSRDYNPLYAQRHEA 247
Query: 634 QFFGRGNIAGIDIKAQKRDQSKFYGEMLEKRRTEAEKEQEKVRLKKVKKREEKQKWD--D 691
FFGRG +AG K Y LE R EA + + L+ ++R E+ + D
Sbjct: 248 NFFGRGRLAGFGDDVADGVARK-YAAALEDRDREAGSVRAREILEMERRRREESTRNQLD 306
Query: 692 RHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEP 751
+HW+EK L+ M ERDWRIF+ED++I KGG VP+P+R+W E+ LP+ +L+++ ++GY +P
Sbjct: 307 KHWSEKKLEHMRERDWRIFKEDFNIATKGGSVPNPMRSWAESGLPSRLLDLVHRVGYKDP 366
Query: 752 TPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARME-DADQGPYAII 810
TPIQR AIPI +Q+RD+IGVA TGSGKT AFLLPLLV+I LP+I E + GPYAI+
Sbjct: 367 TPIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLVYIAELPRIDEFEWRKNDGPYAIV 426
Query: 811 MAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVL 870
+APTRELAQQIE E KF PLG V +VGG S EEQ + LR G EI+IATPGRL+D +
Sbjct: 427 LAPTRELAQQIEIEAKKFTIPLGFTVVSIVGGHSLEEQAYSLRNGAEIIIATPGRLVDCI 486
Query: 871 ENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYN 930
E R LVL+QC Y+++DEADRMID+GFE V KIL+ +PV+N KPD++ AE+ + ++
Sbjct: 487 ERRLLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSDAAENAAAMSQLHH 546
Query: 931 S----KKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQD 986
+ +YRQT+M+TATMP AVER+AR YLRRPA V IGS G+ + +EQ V +++ +D
Sbjct: 547 AGGGRDTRYRQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVELIAGED 606
Query: 987 KRKK-LMEVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALN 1044
KRKK L ++L+ G + P+I+FVN K+ D +A+ +++ G+++ TLHG K QEQRE AL
Sbjct: 607 KRKKRLGDILSSGEFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALA 666
Query: 1045 SLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFC 1104
S++ GS D+LVATD+AGRGID+ DVS+V+N++MA SIE YTHRIGRTGRAGK G+A++F
Sbjct: 667 SVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGRTGRAGKSGVAITFL 726
Query: 1105 TKDDSHLFYDLKQMMISSPVT 1125
+D+ + YDLKQM+I SP++
Sbjct: 727 GNEDADVMYDLKQMLIKSPIS 747
Score = 612 bits (1579), Expect = e-174, Method: Compositional matrix adjust.
Identities = 308/587 (52%), Positives = 414/587 (70%), Gaps = 20/587 (3%)
Query: 1262 IKERYLGL-------VKKKRRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFGRG 1314
+K+RY+G KKKR+ R DRKF F+W+A EDTS DYN +Y +RH+ FFGRG
Sbjct: 196 VKQRYMGAEMTSSFSAKKKRK--RTTDRKFNFEWNAEEDTSRDYNPLYAQRHEANFFGRG 253
Query: 1315 NIAGIDIKAQKRDQSKFYGEMLEKRRTEAEKEQEKVRLKKVKKREEKQKWD--DRHWTEK 1372
+AG K Y LE R EA + + L+ ++R E+ + D+HW+EK
Sbjct: 254 RLAGFGDDVADGVARK-YAAALEDRDREAGSVRAREILEMERRRREESTRNQLDKHWSEK 312
Query: 1373 SLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQ 1432
L+ M ERDWRIF+ED++I KGG VP+P+R+W E+ LP+ +L+++ ++GY +PTPIQR
Sbjct: 313 KLEHMRERDWRIFKEDFNIATKGGSVPNPMRSWAESGLPSRLLDLVHRVGYKDPTPIQRA 372
Query: 1433 AIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARME-DADQGPYAIIMAPTRE 1491
AIPI +Q+RD+IGVA TGSGKT AFLLPLLV+I LP+I E + GPYAI++APTRE
Sbjct: 373 AIPIAMQSRDLIGVAVTGSGKTAAFLLPLLVYIAELPRIDEFEWRKNDGPYAIVLAPTRE 432
Query: 1492 LAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLV 1551
LAQQIE E KF PLG V +VGG S EEQ + LR G EI+IATPGRL+D +E R LV
Sbjct: 433 LAQQIEIEAKKFTIPLGFTVVSIVGGHSLEEQAYSLRNGAEIIIATPGRLVDCIERRLLV 492
Query: 1552 LNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNS----K 1607
L+QC Y+++DEADRMID+GFE V KIL+ +PV+N KPD++ AE+ + +++
Sbjct: 493 LSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSDAAENAAAMSQLHHAGGGRD 552
Query: 1608 KKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKK-L 1666
+YRQT+M+TATMP AVER+AR YLRRPA V IGS G+ + +EQ V +++ +DKRKK L
Sbjct: 553 TRYRQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVELIAGEDKRKKRL 612
Query: 1667 MEVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGS 1725
++L+ G + P+I+FVN K+ D +A+ +++ G+++ TLHG K QEQRE AL S++ GS
Sbjct: 613 GDILSSGEFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGS 672
Query: 1726 KDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSH 1785
D+LVATD+AGRGID+ DVS+V+N++MA SIE YTHRIGRTGRAGK G+A++F +D+
Sbjct: 673 TDVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGRTGRAGKSGVAITFLGNEDAD 732
Query: 1786 LFYDLKQMMISSPVSTCPPELLNHPDAQHKPGTVMVPKKRREEKIFA 1832
+ YDLKQM+I SP+S P EL H AQ KP T KK E F
Sbjct: 733 VMYDLKQMLIKSPISRVPDELRKHEAAQQKP-TRGFSKKNDESSAFG 778
Score = 343 bits (881), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 180/380 (47%), Positives = 243/380 (63%), Gaps = 54/380 (14%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARME- 59
++ ++GY +PTPIQR AIPI +Q+RD+IGVA TGSGKT AFLLPLLV+I LP+I E
Sbjct: 357 LVHRVGYKDPTPIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLVYIAELPRIDEFEW 416
Query: 60 DADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVI 119
+ GPYAI++APTRELAQQIE E KF PLG V +VGG S EEQ + LR G EI+I
Sbjct: 417 RKNDGPYAIVLAPTRELAQQIEIEAKKFTIPLGFTVVSIVGGHSLEEQAYSLRNGAEIII 476
Query: 120 ATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAE 179
ATPGRL+D +E R LVL+QC Y+++DEADRMID+GFE V KIL+ +PV+N KPD++ AE
Sbjct: 477 ATPGRLVDCIERRLLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSDAAE 536
Query: 180 DENKLLANYNS----KKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANY 235
+ + +++ +YRQT+M+TATMP
Sbjct: 537 NAAAMSQLHHAGGGRDTRYRQTMMYTATMP------------------------------ 566
Query: 236 NSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRK 295
AVER+AR YLRRPA V IGS G+ + +EQ V +++ +DKRK
Sbjct: 567 -----------------TAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVELIAGEDKRK 609
Query: 296 K-LMEVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLK 353
K L ++L+ G + P+I+FVN K+ D +A+ +++ G+++ TLHG K QEQRE AL S++
Sbjct: 610 KRLGDILSSGEFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVR 669
Query: 354 GGSKDILMAGDRRSRSRSPP 373
GS D+L+A D R P
Sbjct: 670 NGSTDVLVATDLAGRGIDVP 689
>sp|P93008|RH21_ARATH DEAD-box ATP-dependent RNA helicase 21 OS=Arabidopsis thaliana
GN=RH21 PE=2 SV=1
Length = 733
Score = 612 bits (1579), Expect = e-174, Method: Compositional matrix adjust.
Identities = 315/581 (54%), Positives = 409/581 (70%), Gaps = 19/581 (3%)
Query: 1248 EKELNKDKEREGEAIKERYLGLVKKKRRVRRLNDR-KFVFDWDASEDTSVDYNSIYKERH 1306
EK + ++KE+E +AIKE+YLG K K+RV R +++ +F FDW+ +EDTS D N +Y+ H
Sbjct: 149 EKLVEREKEKELDAIKEQYLGGKKPKKRVIRPSEKFRFSFDWENTEDTSRDMNVLYQNPH 208
Query: 1307 QVQF-FGRGNIAGIDIKAQKRDQSKFYGEM---LEKRRTEAEKEQE----KVRLKKVKKR 1358
+ Q FGRG AG+D + QK+ +K EM + K+ EK +E +VR +
Sbjct: 209 EAQLLFGRGFRAGMDRREQKKQAAKHEKEMRDEIRKKDGIVEKPEEAAAQRVREEAADTY 268
Query: 1359 EEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEII 1418
+ DRHW++K L+EMTERDWRIFRED++I+ KG ++P P+R+W+E+ L +E+L+ +
Sbjct: 269 DSFDMRVDRHWSDKRLEEMTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSELLKAV 328
Query: 1419 EKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDAD 1478
E+ GY +P+PIQ AIP+GLQ RD+IG+AETGSGKT AF+LP+L +I LP ++ E+
Sbjct: 329 ERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSE-ENET 387
Query: 1479 QGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATP 1538
+GPYA++MAPTRELAQQIEEET KF LG R +VGG S EEQG ++ GCEIVIATP
Sbjct: 388 EGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATP 447
Query: 1539 GRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDEN 1598
GRLID LE RY VLNQC Y+VLDEADRMIDMGFEP V +L+ MP +NLKP+ E+ E
Sbjct: 448 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEEL-- 505
Query: 1599 KLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILS 1658
+ KK YR T MF+ATMPP VERLAR YLR P V IG+ GK T+ I Q V ++
Sbjct: 506 ------DEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLISQHVIMMK 559
Query: 1659 EQDKRKKLMEVLNRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELAL 1718
E +K +L ++L+ +K I+FVN KK D +AK L+K GY TLHGGK QEQRE++L
Sbjct: 560 ESEKFFRLQKLLDELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISL 619
Query: 1719 NSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSF 1778
+ ++LVATDV GRGIDI DV+ VINYDM K IE YTHRIGRTGRAGK G+A SF
Sbjct: 620 EGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSF 679
Query: 1779 CTKDDSHLFYDLKQMMISSPVSTCPPELLNHPDAQHKPGTV 1819
T D+ +FYDLKQM++ S S PPEL H ++ KPGTV
Sbjct: 680 LTLHDTEVFYDLKQMLVQSN-SAVPPELARHEASRFKPGTV 719
Score = 599 bits (1545), Expect = e-170, Method: Compositional matrix adjust.
Identities = 315/615 (51%), Positives = 409/615 (66%), Gaps = 53/615 (8%)
Query: 573 EKELNKDKEREGEAIKERYLGLVKKKRRVRRLNDR-KFVFDWDASEDTSVDYNSIYKERH 631
EK + ++KE+E +AIKE+YLG K K+RV R +++ +F FDW+ +EDTS D N +Y+ H
Sbjct: 149 EKLVEREKEKELDAIKEQYLGGKKPKKRVIRPSEKFRFSFDWENTEDTSRDMNVLYQNPH 208
Query: 632 QVQF-FGRGNIAGIDIKAQKRDQSKFYGEM---LEKRRTEAEKEQE----KVRLKKVKKR 683
+ Q FGRG AG+D + QK+ +K EM + K+ EK +E +VR +
Sbjct: 209 EAQLLFGRGFRAGMDRREQKKQAAKHEKEMRDEIRKKDGIVEKPEEAAAQRVREEAADTY 268
Query: 684 EEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEII 743
+ DRHW++K L+EMTERDWRIFRED++I+ KG ++P P+R+W+E+ L +E+L+ +
Sbjct: 269 DSFDMRVDRHWSDKRLEEMTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSELLKAV 328
Query: 744 EKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDAD 803
E+ GY +P+PIQ AIP+GLQ RD+IG+AETGSGKT AF+LP+L +I LP ++ E+
Sbjct: 329 ERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSE-ENET 387
Query: 804 QGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATP 863
+GPYA++MAPTRELAQQIEEET KF LG R +VGG S EEQG ++ GCEIVIATP
Sbjct: 388 EGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATP 447
Query: 864 GRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDEN 923
GRLID LE RY VLNQC Y+VLDEADRMIDMGFEP V +L+ MP +NLKP+ E+ E
Sbjct: 448 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEEL-- 505
Query: 924 KLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILS 983
+ KK YR T MF+ATMPP VERLAR YLR P V IG+ GK T+ I Q V ++
Sbjct: 506 ------DEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLISQHVIMMK 559
Query: 984 EQDKRKKLMEVLNRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELAL 1043
E +K +L ++L+ +K I+FVN KK D +AK L+K GY TLHGGK QEQRE++L
Sbjct: 560 ESEKFFRLQKLLDELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISL 619
Query: 1044 NSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSF 1103
+ ++LVATDV GRGIDI DV+ VINYDM K IE YTHRIGRTGRAGK G+A SF
Sbjct: 620 EGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSF 679
Query: 1104 CTKDDSHLFYDLKQMMISSPVTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVSTCPP 1163
T D+ +FYDLKQM++ S S PP
Sbjct: 680 LTLHDTEVFYDLKQMLVQSN-----------------------------------SAVPP 704
Query: 1164 ELLNHPDAQHKPGTV 1178
EL H ++ KPGTV
Sbjct: 705 ELARHEASRFKPGTV 719
Score = 338 bits (866), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 225/363 (61%), Gaps = 56/363 (15%)
Query: 2 IEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDA 61
+E+ GY +P+PIQ AIP+GLQ RD+IG+AETGSGKT AF+LP+L +I LP ++ E+
Sbjct: 328 VERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSE-ENE 386
Query: 62 DQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIAT 121
+GPYA++MAPTRELAQQIEEET KF LG R +VGG S EEQG ++ GCEIVIAT
Sbjct: 387 TEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIAT 446
Query: 122 PGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDE 181
PGRLID LE RY VLNQC Y+VLDEADRMIDMGFEP V +L+ MP +NLKP+ E+ E
Sbjct: 447 PGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEEL- 505
Query: 182 NKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKY 241
+ KK YR T MF+ATMPP
Sbjct: 506 -------DEKKIYRTTYMFSATMPP----------------------------------- 523
Query: 242 RQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKKLMEVL 301
VERLAR YLR P V IG+ GK T+ I Q V ++ E +K +L ++L
Sbjct: 524 ------------GVERLARKYLRNPVVVTIGTAGKTTDLISQHVIMMKESEKFFRLQKLL 571
Query: 302 NRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILM 361
+ +K I+FVN KK D +AK L+K GY TLHGGK QEQRE++L + ++L+
Sbjct: 572 DELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLV 631
Query: 362 AGD 364
A D
Sbjct: 632 ATD 634
>sp|Q0UWC8|PRP28_PHANO Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Phaeosphaeria
nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)
GN=PRP28 PE=3 SV=1
Length = 746
Score = 599 bits (1544), Expect = e-170, Method: Compositional matrix adjust.
Identities = 321/691 (46%), Positives = 455/691 (65%), Gaps = 47/691 (6%)
Query: 469 MVISDEEEDKGAAAKKEPLSLEELLAKKKAEEEARSKPKFLTKEERAAEALRKRQAEVEE 528
+V S + + A+ +K+P S++++L K+ +E A +KPKFL+K ER AL KR
Sbjct: 43 LVPSKKAKKGWASQRKQPPSIDDILKAKREQEAAAAKPKFLSKAERERIALEKR------ 96
Query: 529 MRKKMEEERKKRQEFTKEASFESKRENFDA--------RLRRDREKKKEDPEEKELNKD- 579
RK++EE +++R+ + S + ++DA R R ++ N D
Sbjct: 97 -RKEVEEAQRRREGSNSSTNGASHKGHYDASSSIPTGPRAMRPEAPSGPPSRQQRSNGDM 155
Query: 580 ----------------KEREGEAIKERYLGLVKKKRRVR------RLNDRKFVFDWDASE 617
++ E I++RY+G + + R ++KF F+W+ E
Sbjct: 156 APPPLPDKKTGKRPPPEDAEAAMIRQRYMGAEQNQSTFSAKKKRKRTTEKKFNFEWNEEE 215
Query: 618 DTSVDYNSIYKERHQVQFFGRGNIAGIDIKAQKRDQSKFYGEMLEKRRTEAEKEQEKV-R 676
DTS DYN IY+++ + FFGRG + G ++ KF M+E+ + E++
Sbjct: 216 DTSYDYNPIYQQKAEAGFFGRGRLGGFTEDVTEQGTQKFIEAMIERDPVSGRERAERILD 275
Query: 677 LKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLP 736
+++ +K E + D+HW+EK L+ M ERDWRIF+ED++I KGG +P+P+RNW+E+ LP
Sbjct: 276 MERRRKEEGGRAQLDKHWSEKKLEHMRERDWRIFKEDFNIATKGGAIPNPMRNWQESGLP 335
Query: 737 TEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKI 796
++L ++E +GYAEP+ +QR AIPI LQ RD+IGVA TGSGKT +F+LPLLV+I LP +
Sbjct: 336 DKVLRLVEHVGYAEPSAVQRAAIPIALQCRDLIGVAVTGSGKTASFVLPLLVYISQLPPL 395
Query: 797 ARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGC 856
AD GPYAI++APTRELAQQIE ET KF PLG T ++VGG S EEQ F++R G
Sbjct: 396 GPSNRAD-GPYAIVLAPTRELAQQIEVETRKFAAPLGFNTAVIVGGHSIEEQAFQMRDGA 454
Query: 857 EIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDT 916
EIVIATPGRL+D +E R LVL+QCTY+++DEADRMIDMGFE V KIL+ +PVTN KPD+
Sbjct: 455 EIVIATPGRLVDCIERRMLVLSQCTYVIMDEADRMIDMGFEEPVNKILDALPVTNEKPDS 514
Query: 917 EDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIE 976
+ AED N + + YRQT+M+TATMP AVER+AR YLRRPA V IG+VG+ E +E
Sbjct: 515 DAAEDPNAM-----KRGMYRQTMMYTATMPTAVERIARKYLRRPAIVTIGNVGEAVETVE 569
Query: 977 QIV-YILSEQDKRKKLMEVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGK 1034
Q V +I E+ ++K+L E+LN G P+I+FVN K+ D +A+ ++ +G+++ TLHG K
Sbjct: 570 QRVEHIQGEEKRKKRLQEILNSGEFTPPIIVFVNIKRNCDAIARDIKNMGFSSVTLHGSK 629
Query: 1035 GQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRA 1094
QEQRE AL L+ D+LVATD+AGRGIDI DVS+V+N++MA SIE YTHRIGRTGRA
Sbjct: 630 TQEQREAALAQLREHRVDVLVATDLAGRGIDITDVSLVVNFNMATSIESYTHRIGRTGRA 689
Query: 1095 GKEGLAVSFCTKDDSHLFYDLKQMMISSPVT 1125
GK G+A++F +D+ + YDLKQM+ S ++
Sbjct: 690 GKSGVAITFWGNEDADVLYDLKQMLTKSQIS 720
Score = 584 bits (1506), Expect = e-165, Method: Compositional matrix adjust.
Identities = 295/569 (51%), Positives = 401/569 (70%), Gaps = 15/569 (2%)
Query: 1258 EGEAIKERYLGLVKKKRRVR------RLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFF 1311
E I++RY+G + + R ++KF F+W+ EDTS DYN IY+++ + FF
Sbjct: 175 EAAMIRQRYMGAEQNQSTFSAKKKRKRTTEKKFNFEWNEEEDTSYDYNPIYQQKAEAGFF 234
Query: 1312 GRGNIAGIDIKAQKRDQSKFYGEMLEKRRTEAEKEQEKV-RLKKVKKREEKQKWDDRHWT 1370
GRG + G ++ KF M+E+ + E++ +++ +K E + D+HW+
Sbjct: 235 GRGRLGGFTEDVTEQGTQKFIEAMIERDPVSGRERAERILDMERRRKEEGGRAQLDKHWS 294
Query: 1371 EKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQ 1430
EK L+ M ERDWRIF+ED++I KGG +P+P+RNW+E+ LP ++L ++E +GYAEP+ +Q
Sbjct: 295 EKKLEHMRERDWRIFKEDFNIATKGGAIPNPMRNWQESGLPDKVLRLVEHVGYAEPSAVQ 354
Query: 1431 RQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTR 1490
R AIPI LQ RD+IGVA TGSGKT +F+LPLLV+I LP + AD GPYAI++APTR
Sbjct: 355 RAAIPIALQCRDLIGVAVTGSGKTASFVLPLLVYISQLPPLGPSNRAD-GPYAIVLAPTR 413
Query: 1491 ELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYL 1550
ELAQQIE ET KF PLG T ++VGG S EEQ F++R G EIVIATPGRL+D +E R L
Sbjct: 414 ELAQQIEVETRKFAAPLGFNTAVIVGGHSIEEQAFQMRDGAEIVIATPGRLVDCIERRML 473
Query: 1551 VLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKY 1610
VL+QCTY+++DEADRMIDMGFE V KIL+ +PVTN KPD++ AED N + + Y
Sbjct: 474 VLSQCTYVIMDEADRMIDMGFEEPVNKILDALPVTNEKPDSDAAEDPNAM-----KRGMY 528
Query: 1611 RQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIV-YILSEQDKRKKLMEV 1669
RQT+M+TATMP AVER+AR YLRRPA V IG+VG+ E +EQ V +I E+ ++K+L E+
Sbjct: 529 RQTMMYTATMPTAVERIARKYLRRPAIVTIGNVGEAVETVEQRVEHIQGEEKRKKRLQEI 588
Query: 1670 LNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDI 1728
LN G P+I+FVN K+ D +A+ ++ +G+++ TLHG K QEQRE AL L+ D+
Sbjct: 589 LNSGEFTPPIIVFVNIKRNCDAIARDIKNMGFSSVTLHGSKTQEQREAALAQLREHRVDV 648
Query: 1729 LVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFY 1788
LVATD+AGRGIDI DVS+V+N++MA SIE YTHRIGRTGRAGK G+A++F +D+ + Y
Sbjct: 649 LVATDLAGRGIDITDVSLVVNFNMATSIESYTHRIGRTGRAGKSGVAITFWGNEDADVLY 708
Query: 1789 DLKQMMISSPVSTCPPELLNHPDAQHKPG 1817
DLKQM+ S +S P +L H AQ K G
Sbjct: 709 DLKQMLTKSQISKVPEDLRKHEAAQQKGG 737
Score = 350 bits (899), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 184/370 (49%), Positives = 238/370 (64%), Gaps = 55/370 (14%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMED 60
++E +GYAEP+ +QR AIPI LQ RD+IGVA TGSGKT +F+LPLLV+I LP +
Sbjct: 341 LVEHVGYAEPSAVQRAAIPIALQCRDLIGVAVTGSGKTASFVLPLLVYISQLPPLGPSNR 400
Query: 61 ADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIA 120
AD GPYAI++APTRELAQQIE ET KF PLG T ++VGG S EEQ F++R G EIVIA
Sbjct: 401 AD-GPYAIVLAPTRELAQQIEVETRKFAAPLGFNTAVIVGGHSIEEQAFQMRDGAEIVIA 459
Query: 121 TPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAED 180
TPGRL+D +E R LVL+QCTY+++DEADRMIDMGFE V KIL+ +PVTN KPD++ AED
Sbjct: 460 TPGRLVDCIERRMLVLSQCTYVIMDEADRMIDMGFEEPVNKILDALPVTNEKPDSDAAED 519
Query: 181 ENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKK 240
N + + YRQT+M+TATMP
Sbjct: 520 PNAM-----KRGMYRQTMMYTATMP----------------------------------- 539
Query: 241 YRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIV-YILSEQDKRKKLME 299
AVER+AR YLRRPA V IG+VG+ E +EQ V +I E+ ++K+L E
Sbjct: 540 ------------TAVERIARKYLRRPAIVTIGNVGEAVETVEQRVEHIQGEEKRKKRLQE 587
Query: 300 VLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKD 358
+LN G P+I+FVN K+ D +A+ ++ +G+++ TLHG K QEQRE AL L+ D
Sbjct: 588 ILNSGEFTPPIIVFVNIKRNCDAIARDIKNMGFSSVTLHGSKTQEQREAALAQLREHRVD 647
Query: 359 ILMAGDRRSR 368
+L+A D R
Sbjct: 648 VLVATDLAGR 657
>sp|A6RJA2|PRP28_BOTFB Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Botryotinia
fuckeliana (strain B05.10) GN=prp28 PE=3 SV=1
Length = 783
Score = 593 bits (1530), Expect = e-168, Method: Compositional matrix adjust.
Identities = 297/584 (50%), Positives = 408/584 (69%), Gaps = 15/584 (2%)
Query: 1229 PRSHKSSSLLSRYSEQDPEEKELNKDKEREGEAIKERYLG------LVKKKRRVRRLNDR 1282
P+ KS++ + + E++ N + + + IK RY+G K++ RR ++
Sbjct: 202 PKPAKSAAAGTGKASVAGEKRPANAE-DLQAALIKTRYMGAETNQSTFSAKKKRRRTTEK 260
Query: 1283 KFVFDWDASEDTSVDYNSIYKERHQVQFFGRGNIAGIDIKAQKRDQSKFYGEMLEKRRTE 1342
KF F+W+A EDTS DYN IY+ R + +GRG + G A+ + Y + LE+R E
Sbjct: 261 KFNFEWNAEEDTSPDYNPIYQNRAEAGLYGRGRLGGF---AEDEGATLKYAKALEERDAE 317
Query: 1343 A--EKEQEKVRLKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPD 1400
A + +E V +++ +K + + D+HW+EK L+ M ERDWRIF+ED++I+ KGG +P+
Sbjct: 318 AGGARAREIVEMERRRKEDAGRNSLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGAIPN 377
Query: 1401 PVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLP 1460
P+RNW E+ LP +L++I ++GY EP+ +QR AIPI LQ RD+IGVA TGSGKT AFLLP
Sbjct: 378 PMRNWSESKLPKRLLDVIHQVGYDEPSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLP 437
Query: 1461 LLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSR 1520
LLV+I LP + D GPYAII+APTRELAQQIE E KF TPLG V +VGG S
Sbjct: 438 LLVYISELPPLNEFTKND-GPYAIILAPTRELAQQIEVEAKKFATPLGFTCVSIVGGHSL 496
Query: 1521 EEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILE 1580
EEQ + LR G EI+IATPGRL+D +E R LVL QC YI++DEADRMID+GFE V KIL+
Sbjct: 497 EEQSYNLRNGAEIIIATPGRLVDCIERRVLVLGQCCYIIMDEADRMIDLGFEESVNKILD 556
Query: 1581 YMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYI 1640
+PV+N KPDT+DAED + + K +YRQT+M+TATMPPAVE++A+ YLRRPA V I
Sbjct: 557 ALPVSNEKPDTDDAEDAQAMSRHLGGKDRYRQTMMYTATMPPAVEKIAKKYLRRPAIVTI 616
Query: 1641 GSVGKPTERIEQIVYILSEQDKRKK-LMEVLNRG-VKKPVIIFVNQKKGADVLAKGLEKL 1698
G++G+ E +EQ V ++ +DKRKK L E+L G P+I+FVN K+ D +A+ ++ +
Sbjct: 617 GNIGEAVETVEQRVEFVAGEDKRKKRLNEILASGEFAPPIIVFVNIKRNCDAVARDIKHM 676
Query: 1699 GYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIED 1758
G+ + TLHG K QEQRE AL S++ G+ ++LVATD+AGRGID+ DVS+V+N++MA +IE
Sbjct: 677 GFTSVTLHGSKTQEQREAALASVRSGATNVLVATDLAGRGIDVPDVSLVVNFNMATNIES 736
Query: 1759 YTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVSTC 1802
YTHRIGRTGRAGK G+A++F +DS YDLKQM+ S +S C
Sbjct: 737 YTHRIGRTGRAGKSGVAITFLGNEDSDTMYDLKQMLTKSSISRC 780
Score = 589 bits (1519), Expect = e-167, Method: Compositional matrix adjust.
Identities = 332/707 (46%), Positives = 451/707 (63%), Gaps = 65/707 (9%)
Query: 480 AAAKKEPLSLEELLAKKKAEEEARSKPKFLTKEERAAEALRKRQAEVEEM-RKKMEE--- 535
A K PLS+E++L KKK +EA +K KFL+K R AL R EVEE RK+ E
Sbjct: 76 GAPKPGPLSIEDILKKKKEADEAAAKAKFLSKAAREKLALETRAKEVEEQKRKREAEQDN 135
Query: 536 ------------------------ERKKRQEFTK-EASF-----ESKRENFDARLRRDRE 565
ER +QE + E+SF + R + +R D+
Sbjct: 136 RISIGSVNGNGNGYGSAANGPDGYERSYQQENGRRESSFVPTGPRAMRNSQQSRSSSDKP 195
Query: 566 KKKEDPE-----------------EKELNKDKEREGEAIKERYLG------LVKKKRRVR 602
E P EK ++ + IK RY+G K++ R
Sbjct: 196 NDMEPPPKPAKSAAAGTGKASVAGEKRPANAEDLQAALIKTRYMGAETNQSTFSAKKKRR 255
Query: 603 RLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFGRGNIAGIDIKAQKRDQSKFYGEMLE 662
R ++KF F+W+A EDTS DYN IY+ R + +GRG + G A+ + Y + LE
Sbjct: 256 RTTEKKFNFEWNAEEDTSPDYNPIYQNRAEAGLYGRGRLGGF---AEDEGATLKYAKALE 312
Query: 663 KRRTEA--EKEQEKVRLKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKG 720
+R EA + +E V +++ +K + + D+HW+EK L+ M ERDWRIF+ED++I+ KG
Sbjct: 313 ERDAEAGGARAREIVEMERRRKEDAGRNSLDKHWSEKKLEHMRERDWRIFKEDFNISTKG 372
Query: 721 GKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTL 780
G +P+P+RNW E+ LP +L++I ++GY EP+ +QR AIPI LQ RD+IGVA TGSGKT
Sbjct: 373 GAIPNPMRNWSESKLPKRLLDVIHQVGYDEPSAVQRAAIPIALQARDLIGVAVTGSGKTA 432
Query: 781 AFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVV 840
AFLLPLLV+I LP + D GPYAII+APTRELAQQIE E KF TPLG V +V
Sbjct: 433 AFLLPLLVYISELPPLNEFTKND-GPYAIILAPTRELAQQIEVEAKKFATPLGFTCVSIV 491
Query: 841 GGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDV 900
GG S EEQ + LR G EI+IATPGRL+D +E R LVL QC YI++DEADRMID+GFE V
Sbjct: 492 GGHSLEEQSYNLRNGAEIIIATPGRLVDCIERRVLVLGQCCYIIMDEADRMIDLGFEESV 551
Query: 901 QKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRP 960
KIL+ +PV+N KPDT+DAED + + K +YRQT+M+TATMPPAVE++A+ YLRRP
Sbjct: 552 NKILDALPVSNEKPDTDDAEDAQAMSRHLGGKDRYRQTMMYTATMPPAVEKIAKKYLRRP 611
Query: 961 ATVYIGSVGKPTERIEQIVYILSEQDKRKK-LMEVLNRG-VKKPVIIFVNQKKGADVLAK 1018
A V IG++G+ E +EQ V ++ +DKRKK L E+L G P+I+FVN K+ D +A+
Sbjct: 612 AIVTIGNIGEAVETVEQRVEFVAGEDKRKKRLNEILASGEFAPPIIVFVNIKRNCDAVAR 671
Query: 1019 GLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMA 1078
++ +G+ + TLHG K QEQRE AL S++ G+ ++LVATD+AGRGID+ DVS+V+N++MA
Sbjct: 672 DIKHMGFTSVTLHGSKTQEQREAALASVRSGATNVLVATDLAGRGIDVPDVSLVVNFNMA 731
Query: 1079 KSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVT 1125
+IE YTHRIGRTGRAGK G+A++F +DS YDLKQM+ S ++
Sbjct: 732 TNIESYTHRIGRTGRAGKSGVAITFLGNEDSDTMYDLKQMLTKSSIS 778
Score = 354 bits (909), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 184/375 (49%), Positives = 237/375 (63%), Gaps = 50/375 (13%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMED 60
+I ++GY EP+ +QR AIPI LQ RD+IGVA TGSGKT AFLLPLLV+I LP +
Sbjct: 394 VIHQVGYDEPSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISELPPLNEFTK 453
Query: 61 ADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIA 120
D GPYAII+APTRELAQQIE E KF TPLG V +VGG S EEQ + LR G EI+IA
Sbjct: 454 ND-GPYAIILAPTRELAQQIEVEAKKFATPLGFTCVSIVGGHSLEEQSYNLRNGAEIIIA 512
Query: 121 TPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAED 180
TPGRL+D +E R LVL QC YI++DEADRMID+GFE V KIL+ +PV+N KPDT+DAED
Sbjct: 513 TPGRLVDCIERRVLVLGQCCYIIMDEADRMIDLGFEESVNKILDALPVSNEKPDTDDAED 572
Query: 181 ENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKK 240
+ + K +YRQT+M+TATMPP
Sbjct: 573 AQAMSRHLGGKDRYRQTMMYTATMPP---------------------------------- 598
Query: 241 YRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKK-LME 299
AVE++A+ YLRRPA V IG++G+ E +EQ V ++ +DKRKK L E
Sbjct: 599 -------------AVEKIAKKYLRRPAIVTIGNIGEAVETVEQRVEFVAGEDKRKKRLNE 645
Query: 300 VLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKD 358
+L G P+I+FVN K+ D +A+ ++ +G+ + TLHG K QEQRE AL S++ G+ +
Sbjct: 646 ILASGEFAPPIIVFVNIKRNCDAVARDIKHMGFTSVTLHGSKTQEQREAALASVRSGATN 705
Query: 359 ILMAGDRRSRSRSPP 373
+L+A D R P
Sbjct: 706 VLVATDLAGRGIDVP 720
>sp|Q7SEL0|PRP28_NEUCR Pre-mRNA-splicing ATP-dependent RNA helicase prp-28 OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM
1257 / FGSC 987) GN=prp-28 PE=3 SV=1
Length = 728
Score = 587 bits (1512), Expect = e-166, Method: Compositional matrix adjust.
Identities = 301/595 (50%), Positives = 406/595 (68%), Gaps = 35/595 (5%)
Query: 1240 RYSEQDPEEKELNKDKEREGEAIKERYLGLV------KKKRRVRRLNDRKFVFDWDASED 1293
R + D EEK ++ E E ++ RY+G V K++ RR KF FDWDA +D
Sbjct: 130 RGAPNDDEEKRAKMERNDEAE-LRARYMGPVVNQSTFSAKKKRRRTAANKFNFDWDADDD 188
Query: 1294 TSVDYNSIYKERHQVQFFGRGNIAGIDIKAQKRDQSKFYGEMLEK-----RRTEAEKEQE 1348
TS ++ IY ER + + G ++ EM+ + RR + E +E
Sbjct: 189 TSRPFDPIYAERQEPLV----RLGGYEMTE----------EMVMRKAEAIRRGDPETGEE 234
Query: 1349 KVR-----LKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVR 1403
+ R +++K+ E+++ +HW+EK L++M ERDWRIF+E++ I KGG +P+P+R
Sbjct: 235 RARQYLEQHRRIKEMEQRKNLG-KHWSEKKLEDMKERDWRIFKENFGIATKGGAIPNPMR 293
Query: 1404 NWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLV 1463
+W+E++LP +L+I++ +GY EPTPIQR AIPI LQ RD+IGVA TGSGKT AFLLPLLV
Sbjct: 294 SWEESTLPRRLLDIVKNVGYDEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLV 353
Query: 1464 WIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQ 1523
+I LP + D GPYA+I+APTREL QQIE E KF TPLG V +VGG S EEQ
Sbjct: 354 YISELPPLTEYNKND-GPYALILAPTRELVQQIESEAKKFATPLGFTVVSIVGGHSLEEQ 412
Query: 1524 GFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMP 1583
F LR G EI++ATPGRL+D LE R LV +QC Y ++DEADRMID GFE + KIL+ MP
Sbjct: 413 AFALRNGAEIIVATPGRLVDCLERRLLVFSQCCYTIMDEADRMIDQGFEEPLTKILDAMP 472
Query: 1584 VTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSV 1643
VTN KPDT+DAE+ + + K +YRQT+M+TATMPP VER+A+ YLRRPA V IG+
Sbjct: 473 VTNEKPDTDDAENPQLMSRYVDGKDRYRQTMMYTATMPPIVERIAKKYLRRPAIVTIGNA 532
Query: 1644 GKPTERIEQIVYILSEQDKRKK-LMEVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYN 1701
G+ + +EQ V +S +DKRKK L E+LN G K P+I+FVN K+ D++A+ ++ +GY+
Sbjct: 533 GEAVDTVEQRVEFVSGEDKRKKRLQEILNSGQFKPPIIVFVNIKRNCDMVARDIKGMGYS 592
Query: 1702 ACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTH 1761
A TLHG K QEQRE AL SL+ G DILVATD+AGRGID+ DVS+V+N++MA +IE YTH
Sbjct: 593 AVTLHGSKTQEQREAALASLRNGQTDILVATDLAGRGIDVPDVSLVVNFNMATNIESYTH 652
Query: 1762 RIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVSTCPPELLNHPDAQHKP 1816
RIGRTGRAGK G+A++F +D+ + YDL+Q++ S +S P EL H AQ+KP
Sbjct: 653 RIGRTGRAGKSGVAITFLGPEDNDVLYDLRQIISKSSISKVPDELRRHEAAQNKP 707
Score = 571 bits (1472), Expect = e-161, Method: Compositional matrix adjust.
Identities = 291/574 (50%), Positives = 395/574 (68%), Gaps = 35/574 (6%)
Query: 570 DPEEKELNKDKEREGEAIKERYLGLV------KKKRRVRRLNDRKFVFDWDASEDTSVDY 623
D EEK ++ E E ++ RY+G V K++ RR KF FDWDA +DTS +
Sbjct: 135 DDEEKRAKMERNDEAE-LRARYMGPVVNQSTFSAKKKRRRTAANKFNFDWDADDDTSRPF 193
Query: 624 NSIYKERHQVQFFGRGNIAGIDIKAQKRDQSKFYGEMLEK-----RRTEAEKEQEKVR-- 676
+ IY ER + + G ++ EM+ + RR + E +E+ R
Sbjct: 194 DPIYAERQEPLV----RLGGYEMTE----------EMVMRKAEAIRRGDPETGEERARQY 239
Query: 677 ---LKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEA 733
+++K+ E+++ +HW+EK L++M ERDWRIF+E++ I KGG +P+P+R+W+E+
Sbjct: 240 LEQHRRIKEMEQRKNLG-KHWSEKKLEDMKERDWRIFKENFGIATKGGAIPNPMRSWEES 298
Query: 734 SLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSL 793
+LP +L+I++ +GY EPTPIQR AIPI LQ RD+IGVA TGSGKT AFLLPLLV+I L
Sbjct: 299 TLPRRLLDIVKNVGYDEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISEL 358
Query: 794 PKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLR 853
P + D GPYA+I+APTREL QQIE E KF TPLG V +VGG S EEQ F LR
Sbjct: 359 PPLTEYNKND-GPYALILAPTRELVQQIESEAKKFATPLGFTVVSIVGGHSLEEQAFALR 417
Query: 854 LGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLK 913
G EI++ATPGRL+D LE R LV +QC Y ++DEADRMID GFE + KIL+ MPVTN K
Sbjct: 418 NGAEIIVATPGRLVDCLERRLLVFSQCCYTIMDEADRMIDQGFEEPLTKILDAMPVTNEK 477
Query: 914 PDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTE 973
PDT+DAE+ + + K +YRQT+M+TATMPP VER+A+ YLRRPA V IG+ G+ +
Sbjct: 478 PDTDDAENPQLMSRYVDGKDRYRQTMMYTATMPPIVERIAKKYLRRPAIVTIGNAGEAVD 537
Query: 974 RIEQIVYILSEQDKRKK-LMEVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLH 1031
+EQ V +S +DKRKK L E+LN G K P+I+FVN K+ D++A+ ++ +GY+A TLH
Sbjct: 538 TVEQRVEFVSGEDKRKKRLQEILNSGQFKPPIIVFVNIKRNCDMVARDIKGMGYSAVTLH 597
Query: 1032 GGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRT 1091
G K QEQRE AL SL+ G DILVATD+AGRGID+ DVS+V+N++MA +IE YTHRIGRT
Sbjct: 598 GSKTQEQREAALASLRNGQTDILVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRT 657
Query: 1092 GRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVT 1125
GRAGK G+A++F +D+ + YDL+Q++ S ++
Sbjct: 658 GRAGKSGVAITFLGPEDNDVLYDLRQIISKSSIS 691
Score = 358 bits (920), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 191/375 (50%), Positives = 236/375 (62%), Gaps = 50/375 (13%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMED 60
I++ +GY EPTPIQR AIPI LQ RD+IGVA TGSGKT AFLLPLLV+I LP +
Sbjct: 307 IVKNVGYDEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISELPPLTEYNK 366
Query: 61 ADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIA 120
D GPYA+I+APTREL QQIE E KF TPLG V +VGG S EEQ F LR G EI++A
Sbjct: 367 ND-GPYALILAPTRELVQQIESEAKKFATPLGFTVVSIVGGHSLEEQAFALRNGAEIIVA 425
Query: 121 TPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAED 180
TPGRL+D LE R LV +QC Y ++DEADRMID GFE + KIL+ MPVTN KPDT+DAE+
Sbjct: 426 TPGRLVDCLERRLLVFSQCCYTIMDEADRMIDQGFEEPLTKILDAMPVTNEKPDTDDAEN 485
Query: 181 ENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKK 240
+ + K +YRQT+M+TATMPP
Sbjct: 486 PQLMSRYVDGKDRYRQTMMYTATMPP---------------------------------- 511
Query: 241 YRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKK-LME 299
VER+A+ YLRRPA V IG+ G+ + +EQ V +S +DKRKK L E
Sbjct: 512 -------------IVERIAKKYLRRPAIVTIGNAGEAVDTVEQRVEFVSGEDKRKKRLQE 558
Query: 300 VLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKD 358
+LN G K P+I+FVN K+ D++A+ ++ +GY+A TLHG K QEQRE AL SL+ G D
Sbjct: 559 ILNSGQFKPPIIVFVNIKRNCDMVARDIKGMGYSAVTLHGSKTQEQREAALASLRNGQTD 618
Query: 359 ILMAGDRRSRSRSPP 373
IL+A D R P
Sbjct: 619 ILVATDLAGRGIDVP 633
>sp|Q4I7F9|PRP28_GIBZE Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Gibberella zeae
(strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084)
GN=PRP28 PE=3 SV=1
Length = 721
Score = 578 bits (1489), Expect = e-163, Method: Compositional matrix adjust.
Identities = 294/579 (50%), Positives = 400/579 (69%), Gaps = 26/579 (4%)
Query: 1258 EGEAIKERYLG--------LVKKKRRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQ 1309
E ++ RYLG KK+R+R ++KF F+WDA EDTS D + +Y + V
Sbjct: 130 EATLLRSRYLGPQVNQQSNFSAKKKRMR-TTEKKFNFEWDADEDTSRDNDPLYDRQTAVS 188
Query: 1310 FFGRGNIAGI----DIKAQKRDQSKFYGEMLEKRRTEAEKEQ-EKVRLKKVKKREEKQKW 1364
G+ AGI D A++R + + +M+ +R E KE+ E + + R++ ++
Sbjct: 189 H--NGSFAGIGGEFDDGAEERARKR--AKMIAQRDPENGKERAEGIMEDFFRARDKARQR 244
Query: 1365 DDR-----HWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIE 1419
DR HW+EKSLD+M ERDWRIF+ED+ I KGG +P+P+R+W+E++LP +L I++
Sbjct: 245 ADRRGLGKHWSEKSLDDMRERDWRIFKEDFGIATKGGMIPNPMRSWQESNLPQRLLNIVD 304
Query: 1420 KIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQ 1479
+GY +P+PIQR AIPI LQ RD+IGVA TGSGKT AFLLPLLV+I LP + + D
Sbjct: 305 DVGYKDPSPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISDLPPLDEINKHD- 363
Query: 1480 GPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPG 1539
GPYA+IMAPTREL QQIE E KF PLG R V +VGG EEQ + LR G EIV+ATPG
Sbjct: 364 GPYALIMAPTRELVQQIETEARKFAGPLGFRVVSIVGGHQIEEQAYNLRDGAEIVVATPG 423
Query: 1540 RLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENK 1599
RL+D +E R LVL+QC Y+++DEADRMID+GFE V KIL+ +PVTN KPDT++AE+
Sbjct: 424 RLLDCIERRLLVLSQCCYVIMDEADRMIDLGFEESVNKILDALPVTNEKPDTDEAENAQI 483
Query: 1600 LLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSE 1659
+ + +YRQT+M+TATMPP VER+A+ YLRRPA V IG+ G+ + +EQ V +S
Sbjct: 484 MQRYLGGRDRYRQTMMYTATMPPLVERIAKKYLRRPAIVTIGNAGEAVDTVEQRVEFVSG 543
Query: 1660 QDKRKK-LMEVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELA 1717
+D+RKK L E+L+ G P+I+FVN K+ D +A+ ++++G++A TLHG K QEQRE A
Sbjct: 544 EDRRKKRLQEILSSGNFGPPIIVFVNIKRNCDAVARDIKQMGWSAVTLHGSKTQEQREAA 603
Query: 1718 LNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVS 1777
L S++ G +LVATD+AGRGID+ DVS+V+N++MA +IE YTHRIGRTGRAGK G+A++
Sbjct: 604 LGSVRAGHTQVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAIT 663
Query: 1778 FCTKDDSHLFYDLKQMMISSPVSTCPPELLNHPDAQHKP 1816
F +D YDLKQ++ S +S P EL H AQ KP
Sbjct: 664 FLGPEDHETMYDLKQILSKSSISKVPEELRRHEAAQSKP 702
Score = 563 bits (1451), Expect = e-159, Method: Compositional matrix adjust.
Identities = 285/563 (50%), Positives = 392/563 (69%), Gaps = 26/563 (4%)
Query: 583 EGEAIKERYLG--------LVKKKRRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQ 634
E ++ RYLG KK+R+R ++KF F+WDA EDTS D + +Y + V
Sbjct: 130 EATLLRSRYLGPQVNQQSNFSAKKKRMR-TTEKKFNFEWDADEDTSRDNDPLYDRQTAVS 188
Query: 635 FFGRGNIAGI----DIKAQKRDQSKFYGEMLEKRRTEAEKEQ-EKVRLKKVKKREEKQKW 689
G+ AGI D A++R + + +M+ +R E KE+ E + + R++ ++
Sbjct: 189 H--NGSFAGIGGEFDDGAEERARKR--AKMIAQRDPENGKERAEGIMEDFFRARDKARQR 244
Query: 690 DDR-----HWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIE 744
DR HW+EKSLD+M ERDWRIF+ED+ I KGG +P+P+R+W+E++LP +L I++
Sbjct: 245 ADRRGLGKHWSEKSLDDMRERDWRIFKEDFGIATKGGMIPNPMRSWQESNLPQRLLNIVD 304
Query: 745 KIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQ 804
+GY +P+PIQR AIPI LQ RD+IGVA TGSGKT AFLLPLLV+I LP + + D
Sbjct: 305 DVGYKDPSPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISDLPPLDEINKHD- 363
Query: 805 GPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPG 864
GPYA+IMAPTREL QQIE E KF PLG R V +VGG EEQ + LR G EIV+ATPG
Sbjct: 364 GPYALIMAPTRELVQQIETEARKFAGPLGFRVVSIVGGHQIEEQAYNLRDGAEIVVATPG 423
Query: 865 RLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENK 924
RL+D +E R LVL+QC Y+++DEADRMID+GFE V KIL+ +PVTN KPDT++AE+
Sbjct: 424 RLLDCIERRLLVLSQCCYVIMDEADRMIDLGFEESVNKILDALPVTNEKPDTDEAENAQI 483
Query: 925 LLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSE 984
+ + +YRQT+M+TATMPP VER+A+ YLRRPA V IG+ G+ + +EQ V +S
Sbjct: 484 MQRYLGGRDRYRQTMMYTATMPPLVERIAKKYLRRPAIVTIGNAGEAVDTVEQRVEFVSG 543
Query: 985 QDKRKK-LMEVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELA 1042
+D+RKK L E+L+ G P+I+FVN K+ D +A+ ++++G++A TLHG K QEQRE A
Sbjct: 544 EDRRKKRLQEILSSGNFGPPIIVFVNIKRNCDAVARDIKQMGWSAVTLHGSKTQEQREAA 603
Query: 1043 LNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVS 1102
L S++ G +LVATD+AGRGID+ DVS+V+N++MA +IE YTHRIGRTGRAGK G+A++
Sbjct: 604 LGSVRAGHTQVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAIT 663
Query: 1103 FCTKDDSHLFYDLKQMMISSPVT 1125
F +D YDLKQ++ S ++
Sbjct: 664 FLGPEDHETMYDLKQILSKSSIS 686
Score = 345 bits (885), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/375 (48%), Positives = 236/375 (62%), Gaps = 50/375 (13%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMED 60
I++ +GY +P+PIQR AIPI LQ RD+IGVA TGSGKT AFLLPLLV+I LP + +
Sbjct: 302 IVDDVGYKDPSPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISDLPPLDEINK 361
Query: 61 ADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIA 120
D GPYA+IMAPTREL QQIE E KF PLG R V +VGG EEQ + LR G EIV+A
Sbjct: 362 HD-GPYALIMAPTRELVQQIETEARKFAGPLGFRVVSIVGGHQIEEQAYNLRDGAEIVVA 420
Query: 121 TPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAED 180
TPGRL+D +E R LVL+QC Y+++DEADRMID+GFE V KIL+ +PVTN KPDT++AE+
Sbjct: 421 TPGRLLDCIERRLLVLSQCCYVIMDEADRMIDLGFEESVNKILDALPVTNEKPDTDEAEN 480
Query: 181 ENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKK 240
+ + +YRQT+M+TATMPP
Sbjct: 481 AQIMQRYLGGRDRYRQTMMYTATMPP---------------------------------- 506
Query: 241 YRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKK-LME 299
VER+A+ YLRRPA V IG+ G+ + +EQ V +S +D+RKK L E
Sbjct: 507 -------------LVERIAKKYLRRPAIVTIGNAGEAVDTVEQRVEFVSGEDRRKKRLQE 553
Query: 300 VLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKD 358
+L+ G P+I+FVN K+ D +A+ ++++G++A TLHG K QEQRE AL S++ G
Sbjct: 554 ILSSGNFGPPIIVFVNIKRNCDAVARDIKQMGWSAVTLHGSKTQEQREAALGSVRAGHTQ 613
Query: 359 ILMAGDRRSRSRSPP 373
+L+A D R P
Sbjct: 614 VLVATDLAGRGIDVP 628
>sp|Q9Y7T7|PRP28_SCHPO Pre-mRNA-splicing ATP-dependent RNA helicase prp28
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp28 PE=3 SV=1
Length = 662
Score = 578 bits (1489), Expect = e-163, Method: Compositional matrix adjust.
Identities = 304/649 (46%), Positives = 431/649 (66%), Gaps = 39/649 (6%)
Query: 488 SLEELLAKKKAEEEARSKPKFLTKEERAAEALRKRQAEVEEMRKKMEE---ERKKRQEFT 544
SLE+L+ +K+ +EE ++PKFL+K ERA AL +RQ EVEE + K + + +KR
Sbjct: 9 SLEQLVQQKRVKEEKAARPKFLSKAERARLALERRQKEVEEAKAKQNDKLLDLRKR---- 64
Query: 545 KEASFESKRENFDARLRRDREKKKEDPEEK------ELNKDKEREGEAIKERYLGL---V 595
+F + EN + D EKK + E + E I++RY+G+ V
Sbjct: 65 ---TFTNHLENNELA---DDEKKSQVSSVSSNNSGTESSATDEAFSMTIRQRYMGIKPPV 118
Query: 596 KKKRRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFGRGNIAGIDIKA--QKRDQ 653
KKRR R D+KFVFDWDA++DT D + + FGRG + G D ++ + +
Sbjct: 119 VKKRR--RNADKKFVFDWDATDDTMKDAETSASPEATIAVFGRGKLGGFDDQSIRKAKSN 176
Query: 654 SKFYGEMLEKRRTEAEKEQEKVRLKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFRED 713
S +L+ + + E ++L++ KR +K WDD W EK L+ M RDWRI +ED
Sbjct: 177 SGLIQRLLQGTEQDKARAHELIQLQE--KRAKKIDWDDVPWREKPLEAMKPRDWRILKED 234
Query: 714 YSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAE 773
Y+I+IKG +P+P+RNW+EA LP+E+L++++K+ Y EP+ IQR AIP+ LQ +D+IG+AE
Sbjct: 235 YNISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAE 294
Query: 774 TGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLG 833
TGSGKT AF++PL++ I LP + + GPYA+++APTRELAQQI+ E NKF PLG
Sbjct: 295 TGSGKTAAFIIPLIIAISKLPPLTE-SNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPLG 353
Query: 834 IRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMID 893
R V VVGG + EEQ F++ G IV+ATPGRL+D LE R VL+QCTY+V+DEADRM+D
Sbjct: 354 FRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRMLD 413
Query: 894 MGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLA 953
MGFE DV KIL +P +N +E + +LA NS RQT+MF+AT+PP V LA
Sbjct: 414 MGFEDDVNKILSSLPSSNA------SEKDGSILATANSSSSRRQTIMFSATLPPRVANLA 467
Query: 954 RSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKR-KKLMEVL--NRGVKKPVIIFVNQK 1010
+SYL P + IG++G+ +R+EQ V ++S+ K+ +++ E+L NR P+IIFVN K
Sbjct: 468 KSYLIEPVMLTIGNIGQAVDRVEQRVEMISDDSKKWRRVEEILESNR-FSPPIIIFVNLK 526
Query: 1011 KGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVS 1070
+ + +AK L +G++A TLHG K QEQRE A+ L+ + DILVATD+AGRGIDI +VS
Sbjct: 527 RNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKTADILVATDIAGRGIDIPNVS 586
Query: 1071 MVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMM 1119
+V+NY+MAKSIEDYTHRIGRTGRAGK G A++F +D+ ++YDL+ ++
Sbjct: 587 LVLNYNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPEDTDVYYDLRVLL 635
Score = 558 bits (1437), Expect = e-157, Method: Compositional matrix adjust.
Identities = 276/559 (49%), Positives = 386/559 (69%), Gaps = 20/559 (3%)
Query: 1262 IKERYLGL---VKKKRRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFGRGNIAG 1318
I++RY+G+ V KKRR R D+KFVFDWDA++DT D + + FGRG + G
Sbjct: 107 IRQRYMGIKPPVVKKRR--RNADKKFVFDWDATDDTMKDAETSASPEATIAVFGRGKLGG 164
Query: 1319 IDIKA--QKRDQSKFYGEMLEKRRTEAEKEQEKVRLKKVKKREEKQKWDDRHWTEKSLDE 1376
D ++ + + S +L+ + + E ++L++ KR +K WDD W EK L+
Sbjct: 165 FDDQSIRKAKSNSGLIQRLLQGTEQDKARAHELIQLQE--KRAKKIDWDDVPWREKPLEA 222
Query: 1377 MTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPI 1436
M RDWRI +EDY+I+IKG +P+P+RNW+EA LP+E+L++++K+ Y EP+ IQR AIP+
Sbjct: 223 MKPRDWRILKEDYNISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPV 282
Query: 1437 GLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQI 1496
LQ +D+IG+AETGSGKT AF++PL++ I LP + + GPYA+++APTRELAQQI
Sbjct: 283 LLQRKDLIGIAETGSGKTAAFIIPLIIAISKLPPLTE-SNMHLGPYAVVLAPTRELAQQI 341
Query: 1497 EEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCT 1556
+ E NKF PLG R V VVGG + EEQ F++ G IV+ATPGRL+D LE R VL+QCT
Sbjct: 342 QVEGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCT 401
Query: 1557 YIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMF 1616
Y+V+DEADRM+DMGFE DV KIL +P +N +E + +LA NS RQT+MF
Sbjct: 402 YVVMDEADRMLDMGFEDDVNKILSSLPSSNA------SEKDGSILATANSSSSRRQTIMF 455
Query: 1617 TATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKR-KKLMEVL--NRG 1673
+AT+PP V LA+SYL P + IG++G+ +R+EQ V ++S+ K+ +++ E+L NR
Sbjct: 456 SATLPPRVANLAKSYLIEPVMLTIGNIGQAVDRVEQRVEMISDDSKKWRRVEEILESNR- 514
Query: 1674 VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATD 1733
P+IIFVN K+ + +AK L +G++A TLHG K QEQRE A+ L+ + DILVATD
Sbjct: 515 FSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKTADILVATD 574
Query: 1734 VAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQM 1793
+AGRGIDI +VS+V+NY+MAKSIEDYTHRIGRTGRAGK G A++F +D+ ++YDL+ +
Sbjct: 575 IAGRGIDIPNVSLVLNYNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPEDTDVYYDLRVL 634
Query: 1794 MISSPVSTCPPELLNHPDA 1812
+ S + P EL NH A
Sbjct: 635 LSRSAKAHIPDELRNHEAA 653
Score = 309 bits (791), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/376 (43%), Positives = 226/376 (60%), Gaps = 58/376 (15%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMED 60
+++K+ Y EP+ IQR AIP+ LQ +D+IG+AETGSGKT AF++PL++ I LP + +
Sbjct: 263 VLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETGSGKTAAFIIPLIIAISKLPPLTE-SN 321
Query: 61 ADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIA 120
GPYA+++APTRELAQQI+ E NKF PLG R V VVGG + EEQ F++ G IV+A
Sbjct: 322 MHLGPYAVVLAPTRELAQQIQVEGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQGAHIVVA 381
Query: 121 TPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAED 180
TPGRL+D LE R VL+QCTY+V+DEADRM+DMGFE DV KIL +P +N +E
Sbjct: 382 TPGRLLDCLERRLFVLSQCTYVVMDEADRMLDMGFEDDVNKILSSLPSSNA------SEK 435
Query: 181 ENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKK 240
+ +LA NS RQT+MF+AT+PP
Sbjct: 436 DGSILATANSSSSRRQTIMFSATLPP---------------------------------- 461
Query: 241 YRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKR-KKLME 299
V LA+SYL P + IG++G+ +R+EQ V ++S+ K+ +++ E
Sbjct: 462 -------------RVANLAKSYLIEPVMLTIGNIGQAVDRVEQRVEMISDDSKKWRRVEE 508
Query: 300 VL--NRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSK 357
+L NR P+IIFVN K+ + +AK L +G++A TLHG K QEQRE A+ L+ +
Sbjct: 509 ILESNR-FSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKTA 567
Query: 358 DILMAGDRRSRSRSPP 373
DIL+A D R P
Sbjct: 568 DILVATDIAGRGIDIP 583
>sp|Q2HEB0|PRP28_CHAGB Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Chaetomium
globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC
6347 / NRRL 1970) GN=PRP28 PE=3 SV=1
Length = 705
Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust.
Identities = 294/597 (49%), Positives = 400/597 (67%), Gaps = 37/597 (6%)
Query: 1243 EQDPEEKELNKDKEREGEA-------IKERYLG------LVKKKRRVRRLNDRKFVFDWD 1289
E + + LN + E+ E ++ +Y+G K++ +R KF FDWD
Sbjct: 101 EHGGKRRRLNDNDEKRAEMERKDAAELRAKYMGPEVNQSTFSAKKKRKRTAANKFNFDWD 160
Query: 1290 ASEDTSVDYNSIYKERHQ--VQFFGRGNIAGIDIKAQKRDQSKFYGEMLEKRRTEAEKEQ 1347
+DTS ++ +Y ER + V+ G N + ++ + RR + E +
Sbjct: 161 PEDDTSRPFDPVYAERPESLVRLAGYENTDELVLRKAE-----------AIRRGDPETGE 209
Query: 1348 EKVR-----LKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPV 1402
E+ R ++VK+ E++ + +HW+EK L++M ERDWRIF+E++ I KGG +P+P+
Sbjct: 210 ERARKLLEQHERVKQAAERKNFG-KHWSEKKLEDMKERDWRIFKENFGIATKGGAIPNPM 268
Query: 1403 RNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLL 1462
R+W E++LP +LEI+E +GY EPTPIQR AIPI Q RD+IGVA TGSGKT AFLLPLL
Sbjct: 269 RSWAESNLPRRLLEIVENVGYDEPTPIQRAAIPIAQQARDLIGVAVTGSGKTAAFLLPLL 328
Query: 1463 VWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREE 1522
V+I LP + D GPYA+I+APTREL QQIE E KF PLG V +VGG S EE
Sbjct: 329 VYISELPPLTEFNKND-GPYALILAPTRELVQQIETEARKFAGPLGFTVVSIVGGHSLEE 387
Query: 1523 QGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYM 1582
Q F LR G EI++ATPGRL+D LE R LV +QC YI++DEADRMID GFE + KIL+ +
Sbjct: 388 QAFALRNGAEIIVATPGRLVDCLERRLLVFSQCCYIIMDEADRMIDQGFEEPLTKILDAL 447
Query: 1583 PVTNLKPDTEDAEDENKLLANY-NSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIG 1641
PV N KPDTEDAE+ ++L++ Y K +YRQT+M+TATMPP VE++A+ YLRRPA V IG
Sbjct: 448 PVANEKPDTEDAEN-SQLMSRYLGGKDRYRQTMMYTATMPPLVEKIAKKYLRRPAIVTIG 506
Query: 1642 SVGKPTERIEQIVYILSEQDKRK-KLMEVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLG 1699
+ G+ + +EQ V +S +DKRK +L E+LN G K PVI+FVN K+ +++AK ++ G
Sbjct: 507 NAGEAVDTVEQRVEFVSGEDKRKRRLQEILNSGQFKPPVIVFVNIKRNCEMVAKDIKSWG 566
Query: 1700 YNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDY 1759
Y+ TLHG K QEQRE +L S++ G +ILVATD+AGRGID+ DVS+V+N++M SIE Y
Sbjct: 567 YSTVTLHGSKTQEQREASLASVRNGQANILVATDLAGRGIDVADVSLVVNFNMPSSIEAY 626
Query: 1760 THRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVSTCPPELLNHPDAQHKP 1816
THRIGRTGRAGK G+A++F +DS + YDLKQ++ S +S P EL H AQ KP
Sbjct: 627 THRIGRTGRAGKSGVAITFLGNEDSDVMYDLKQIISKSSISKVPEELRRHEAAQSKP 683
Score = 554 bits (1427), Expect = e-156, Method: Compositional matrix adjust.
Identities = 284/575 (49%), Positives = 390/575 (67%), Gaps = 37/575 (6%)
Query: 574 KELNKDKEREGEA-------IKERYLG------LVKKKRRVRRLNDRKFVFDWDASEDTS 620
+ LN + E+ E ++ +Y+G K++ +R KF FDWD +DTS
Sbjct: 107 RRLNDNDEKRAEMERKDAAELRAKYMGPEVNQSTFSAKKKRKRTAANKFNFDWDPEDDTS 166
Query: 621 VDYNSIYKERHQ--VQFFGRGNIAGIDIKAQKRDQSKFYGEMLEKRRTEAEKEQEKVR-- 676
++ +Y ER + V+ G N + ++ + RR + E +E+ R
Sbjct: 167 RPFDPVYAERPESLVRLAGYENTDELVLRKAE-----------AIRRGDPETGEERARKL 215
Query: 677 ---LKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEA 733
++VK+ E++ + +HW+EK L++M ERDWRIF+E++ I KGG +P+P+R+W E+
Sbjct: 216 LEQHERVKQAAERKNFG-KHWSEKKLEDMKERDWRIFKENFGIATKGGAIPNPMRSWAES 274
Query: 734 SLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSL 793
+LP +LEI+E +GY EPTPIQR AIPI Q RD+IGVA TGSGKT AFLLPLLV+I L
Sbjct: 275 NLPRRLLEIVENVGYDEPTPIQRAAIPIAQQARDLIGVAVTGSGKTAAFLLPLLVYISEL 334
Query: 794 PKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLR 853
P + D GPYA+I+APTREL QQIE E KF PLG V +VGG S EEQ F LR
Sbjct: 335 PPLTEFNKND-GPYALILAPTRELVQQIETEARKFAGPLGFTVVSIVGGHSLEEQAFALR 393
Query: 854 LGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLK 913
G EI++ATPGRL+D LE R LV +QC YI++DEADRMID GFE + KIL+ +PV N K
Sbjct: 394 NGAEIIVATPGRLVDCLERRLLVFSQCCYIIMDEADRMIDQGFEEPLTKILDALPVANEK 453
Query: 914 PDTEDAEDENKLLANY-NSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPT 972
PDTEDAE+ ++L++ Y K +YRQT+M+TATMPP VE++A+ YLRRPA V IG+ G+
Sbjct: 454 PDTEDAEN-SQLMSRYLGGKDRYRQTMMYTATMPPLVEKIAKKYLRRPAIVTIGNAGEAV 512
Query: 973 ERIEQIVYILSEQDKRK-KLMEVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTL 1030
+ +EQ V +S +DKRK +L E+LN G K PVI+FVN K+ +++AK ++ GY+ TL
Sbjct: 513 DTVEQRVEFVSGEDKRKRRLQEILNSGQFKPPVIVFVNIKRNCEMVAKDIKSWGYSTVTL 572
Query: 1031 HGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGR 1090
HG K QEQRE +L S++ G +ILVATD+AGRGID+ DVS+V+N++M SIE YTHRIGR
Sbjct: 573 HGSKTQEQREASLASVRNGQANILVATDLAGRGIDVADVSLVVNFNMPSSIEAYTHRIGR 632
Query: 1091 TGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVT 1125
TGRAGK G+A++F +DS + YDLKQ++ S ++
Sbjct: 633 TGRAGKSGVAITFLGNEDSDVMYDLKQIISKSSIS 667
Score = 346 bits (888), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 186/371 (50%), Positives = 235/371 (63%), Gaps = 52/371 (14%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMED 60
I+E +GY EPTPIQR AIPI Q RD+IGVA TGSGKT AFLLPLLV+I LP +
Sbjct: 283 IVENVGYDEPTPIQRAAIPIAQQARDLIGVAVTGSGKTAAFLLPLLVYISELPPLTEFNK 342
Query: 61 ADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIA 120
D GPYA+I+APTREL QQIE E KF PLG V +VGG S EEQ F LR G EI++A
Sbjct: 343 ND-GPYALILAPTRELVQQIETEARKFAGPLGFTVVSIVGGHSLEEQAFALRNGAEIIVA 401
Query: 121 TPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAED 180
TPGRL+D LE R LV +QC YI++DEADRMID GFE + KIL+ +PV N KPDTEDAE+
Sbjct: 402 TPGRLVDCLERRLLVFSQCCYIIMDEADRMIDQGFEEPLTKILDALPVANEKPDTEDAEN 461
Query: 181 ENKLLANY-NSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKK 239
++L++ Y K +YRQT+M+TATMPP
Sbjct: 462 -SQLMSRYLGGKDRYRQTMMYTATMPP--------------------------------- 487
Query: 240 KYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRK-KLM 298
VE++A+ YLRRPA V IG+ G+ + +EQ V +S +DKRK +L
Sbjct: 488 --------------LVEKIAKKYLRRPAIVTIGNAGEAVDTVEQRVEFVSGEDKRKRRLQ 533
Query: 299 EVLNRG-VKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSK 357
E+LN G K PVI+FVN K+ +++AK ++ GY+ TLHG K QEQRE +L S++ G
Sbjct: 534 EILNSGQFKPPVIVFVNIKRNCEMVAKDIKSWGYSTVTLHGSKTQEQREASLASVRNGQA 593
Query: 358 DILMAGDRRSR 368
+IL+A D R
Sbjct: 594 NILVATDLAGR 604
>sp|P0CQ88|PRP28_CRYNJ Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=PRP28 PE=3 SV=1
Length = 738
Score = 551 bits (1421), Expect = e-155, Method: Compositional matrix adjust.
Identities = 289/592 (48%), Positives = 398/592 (67%), Gaps = 37/592 (6%)
Query: 1231 SHKSSSLLSRYSEQDPEEKELNKD----KEREGEAIKERYLG--LVKKKRRVRRLNDRKF 1284
S SS+ ++ + P + D + E EA++ RYLG KK R+R+ D+K
Sbjct: 151 SQLSSTPVAGSASPGPASTTASGDAVPPSQAELEALRARYLGKRTDGKKPRLRKAQDKKI 210
Query: 1285 VFDWDASEDTSV-DYNSIYKERHQV----QFFGRGNIAGIDIKAQKRDQSKFYGEMLEKR 1339
+FDW+ +DTS D +S +E ++ FG G +AG+D + +S + + LE+R
Sbjct: 211 IFDWNEQDDTSAADQSSWTREVRELVPGGTMFG-GRLAGMDGAKKNETRSDNHADPLERR 269
Query: 1340 RTEAEKEQEKVRLKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKVP 1399
R K K DDRHW++K LDEM ERDWRIFRED+SI +GG +P
Sbjct: 270 RAV------------------KGKDDDRHWSDKPLDEMKERDWRIFREDFSIAARGGGIP 311
Query: 1400 DPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLL 1459
P+RNW+E+++P++IL+IIE+IGY EP+PIQRQAIPIG+QNRD+IGVA+TGSGKT AF++
Sbjct: 312 HPLRNWRESAIPSQILDIIEEIGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVI 371
Query: 1460 PLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLS 1519
P+L +I LP + ++ GPYA+IMAPTRELAQQIE ET +F PLG + V +VGG S
Sbjct: 372 PMLDYIGHLPPL-NDDNRHLGPYALIMAPTRELAQQIETETRRFALPLGYKCVSIVGGRS 430
Query: 1520 REEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKIL 1579
EEQ F LR G EI+IATPGRL D+++ LV++QC Y+V+DEADRM+D+GFE D+ IL
Sbjct: 431 VEEQQFALRDGAEIIIATPGRLKDMVDKSILVMSQCRYVVMDEADRMVDLGFEVDLNFIL 490
Query: 1580 EYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVY 1639
+ MP T +KPD A K + +R T +F+ATMPPAVERLAR YL +PATV
Sbjct: 491 DSMPATFVKPDDSVALQPTK----EGEWQGWRVTTLFSATMPPAVERLARKYLIKPATVV 546
Query: 1640 IGSVGKPTERIEQIV-YILSEQDKRKKLMEVLNR-GVKKPVIIFVNQKKGADVLAKGLEK 1697
IG+ G+ + +EQ V ++ ++ K+ +L+E+L G+ P+I+FVNQKK AD++ K +++
Sbjct: 547 IGNAGEAVDTVEQRVEFVHGDEKKKARLIEILRTIGLPPPIIVFVNQKKTADMVVKYVQQ 606
Query: 1698 LGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIE 1757
G + TLH GK QEQRE AL +L+ G +LVATD+AGRGID+ DVS+VIN+ M+ +IE
Sbjct: 607 AGMSGVTLHSGKSQEQREAALQALRDGEISVLVATDLAGRGIDVPDVSLVINWQMSDTIE 666
Query: 1758 DYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVSTCPPELLNH 1809
Y HRIGRTGRAGK G+A++F T DD + YDL+ + S +S PEL H
Sbjct: 667 KYVHRIGRTGRAGKTGVAITFLTNDDDEVMYDLRIEVEKSKMSKMNPELARH 718
Score = 544 bits (1402), Expect = e-153, Method: Compositional matrix adjust.
Identities = 278/543 (51%), Positives = 379/543 (69%), Gaps = 33/543 (6%)
Query: 583 EGEAIKERYLG--LVKKKRRVRRLNDRKFVFDWDASEDTSV-DYNSIYKERHQV----QF 635
E EA++ RYLG KK R+R+ D+K +FDW+ +DTS D +S +E ++
Sbjct: 182 ELEALRARYLGKRTDGKKPRLRKAQDKKIIFDWNEQDDTSAADQSSWTREVRELVPGGTM 241
Query: 636 FGRGNIAGIDIKAQKRDQSKFYGEMLEKRRTEAEKEQEKVRLKKVKKREEKQKWDDRHWT 695
FG G +AG+D + +S + + LE+RR K K DDRHW+
Sbjct: 242 FG-GRLAGMDGAKKNETRSDNHADPLERRRAV------------------KGKDDDRHWS 282
Query: 696 EKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQ 755
+K LDEM ERDWRIFRED+SI +GG +P P+RNW+E+++P++IL+IIE+IGY EP+PIQ
Sbjct: 283 DKPLDEMKERDWRIFREDFSIAARGGGIPHPLRNWRESAIPSQILDIIEEIGYKEPSPIQ 342
Query: 756 RQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTR 815
RQAIPIG+QNRD+IGVA+TGSGKT AF++P+L +I LP + ++ GPYA+IMAPTR
Sbjct: 343 RQAIPIGMQNRDLIGVAKTGSGKTAAFVIPMLDYIGHLPPL-NDDNRHLGPYALIMAPTR 401
Query: 816 ELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYL 875
ELAQQIE ET +F PLG + V +VGG S EEQ F LR G EI+IATPGRL D+++ L
Sbjct: 402 ELAQQIETETRRFALPLGYKCVSIVGGRSVEEQQFALRDGAEIIIATPGRLKDMVDKSIL 461
Query: 876 VLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKY 935
V++QC Y+V+DEADRM+D+GFE D+ IL+ MP T +KPD A K + +
Sbjct: 462 VMSQCRYVVMDEADRMVDLGFEVDLNFILDSMPATFVKPDDSVALQPTK----EGEWQGW 517
Query: 936 RQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIV-YILSEQDKRKKLMEV 994
R T +F+ATMPPAVERLAR YL +PATV IG+ G+ + +EQ V ++ ++ K+ +L+E+
Sbjct: 518 RVTTLFSATMPPAVERLARKYLIKPATVVIGNAGEAVDTVEQRVEFVHGDEKKKARLIEI 577
Query: 995 LNR-GVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDI 1053
L G+ P+I+FVNQKK AD++ K +++ G + TLH GK QEQRE AL +L+ G +
Sbjct: 578 LRTIGLPPPIIVFVNQKKTADMVVKYVQQAGMSGVTLHSGKSQEQREAALQALRDGEISV 637
Query: 1054 LVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFY 1113
LVATD+AGRGID+ DVS+VIN+ M+ +IE Y HRIGRTGRAGK G+A++F T DD + Y
Sbjct: 638 LVATDLAGRGIDVPDVSLVINWQMSDTIEKYVHRIGRTGRAGKTGVAITFLTNDDDEVMY 697
Query: 1114 DLK 1116
DL+
Sbjct: 698 DLR 700
Score = 318 bits (814), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/375 (46%), Positives = 233/375 (62%), Gaps = 54/375 (14%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMED 60
IIE+IGY EP+PIQRQAIPIG+QNRD+IGVA+TGSGKT AF++P+L +I LP + ++
Sbjct: 329 IIEEIGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVIPMLDYIGHLPPLND-DN 387
Query: 61 ADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIA 120
GPYA+IMAPTRELAQQIE ET +F PLG + V +VGG S EEQ F LR G EI+IA
Sbjct: 388 RHLGPYALIMAPTRELAQQIETETRRFALPLGYKCVSIVGGRSVEEQQFALRDGAEIIIA 447
Query: 121 TPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAED 180
TPGRL D+++ LV++QC Y+V+DEADRM+D+GFE D+ IL+ MP T +KPD A
Sbjct: 448 TPGRLKDMVDKSILVMSQCRYVVMDEADRMVDLGFEVDLNFILDSMPATFVKPDDSVALQ 507
Query: 181 ENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKK 240
K + +R T +F+ATMPP
Sbjct: 508 PTK----EGEWQGWRVTTLFSATMPP---------------------------------- 529
Query: 241 YRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIV-YILSEQDKRKKLME 299
AVERLAR YL +PATV IG+ G+ + +EQ V ++ ++ K+ +L+E
Sbjct: 530 -------------AVERLARKYLIKPATVVIGNAGEAVDTVEQRVEFVHGDEKKKARLIE 576
Query: 300 VLNR-GVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKD 358
+L G+ P+I+FVNQKK AD++ K +++ G + TLH GK QEQRE AL +L+ G
Sbjct: 577 ILRTIGLPPPIIVFVNQKKTADMVVKYVQQAGMSGVTLHSGKSQEQREAALQALRDGEIS 636
Query: 359 ILMAGDRRSRSRSPP 373
+L+A D R P
Sbjct: 637 VLVATDLAGRGIDVP 651
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 48/58 (82%)
Query: 486 PLSLEELLAKKKAEEEARSKPKFLTKEERAAEALRKRQAEVEEMRKKMEEERKKRQEF 543
PLS+E++LAK+KAE+EA +KPKFL+K ER AL KRQ+EV E +++ + ER++R+EF
Sbjct: 4 PLSVEDMLAKQKAEKEAAAKPKFLSKAERQKIALEKRQSEVREQQEREDAERRQREEF 61
>sp|P0CQ89|PRP28_CRYNB Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=PRP28 PE=3 SV=1
Length = 738
Score = 551 bits (1421), Expect = e-155, Method: Compositional matrix adjust.
Identities = 289/592 (48%), Positives = 398/592 (67%), Gaps = 37/592 (6%)
Query: 1231 SHKSSSLLSRYSEQDPEEKELNKD----KEREGEAIKERYLG--LVKKKRRVRRLNDRKF 1284
S SS+ ++ + P + D + E EA++ RYLG KK R+R+ D+K
Sbjct: 151 SQLSSTPVAGSASPGPASTTASGDAVPPSQAELEALRARYLGKRTDGKKPRLRKAQDKKI 210
Query: 1285 VFDWDASEDTSV-DYNSIYKERHQV----QFFGRGNIAGIDIKAQKRDQSKFYGEMLEKR 1339
+FDW+ +DTS D +S +E ++ FG G +AG+D + +S + + LE+R
Sbjct: 211 IFDWNEQDDTSAADQSSWTREVRELVPGGTMFG-GRLAGMDGAKKNETRSDNHADPLERR 269
Query: 1340 RTEAEKEQEKVRLKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKVP 1399
R K K DDRHW++K LDEM ERDWRIFRED+SI +GG +P
Sbjct: 270 RAV------------------KGKDDDRHWSDKPLDEMKERDWRIFREDFSIAARGGGIP 311
Query: 1400 DPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLL 1459
P+RNW+E+++P++IL+IIE+IGY EP+PIQRQAIPIG+QNRD+IGVA+TGSGKT AF++
Sbjct: 312 HPLRNWRESAIPSQILDIIEEIGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVI 371
Query: 1460 PLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLS 1519
P+L +I LP + ++ GPYA+IMAPTRELAQQIE ET +F PLG + V +VGG S
Sbjct: 372 PMLDYIGHLPPL-NDDNRHLGPYALIMAPTRELAQQIETETRRFALPLGYKCVSIVGGRS 430
Query: 1520 REEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKIL 1579
EEQ F LR G EI+IATPGRL D+++ LV++QC Y+V+DEADRM+D+GFE D+ IL
Sbjct: 431 VEEQQFALRDGAEIIIATPGRLKDMVDKSILVMSQCRYVVMDEADRMVDLGFEVDLNFIL 490
Query: 1580 EYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVY 1639
+ MP T +KPD A K + +R T +F+ATMPPAVERLAR YL +PATV
Sbjct: 491 DSMPATFVKPDDSVALQPTK----EGEWQGWRVTTLFSATMPPAVERLARKYLIKPATVV 546
Query: 1640 IGSVGKPTERIEQIV-YILSEQDKRKKLMEVLNR-GVKKPVIIFVNQKKGADVLAKGLEK 1697
IG+ G+ + +EQ V ++ ++ K+ +L+E+L G+ P+I+FVNQKK AD++ K +++
Sbjct: 547 IGNAGEAVDTVEQRVEFVHGDEKKKARLIEILRTIGLPPPIIVFVNQKKTADMVVKYVQQ 606
Query: 1698 LGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIE 1757
G + TLH GK QEQRE AL +L+ G +LVATD+AGRGID+ DVS+VIN+ M+ +IE
Sbjct: 607 AGMSGVTLHSGKSQEQREAALQALRDGEISVLVATDLAGRGIDVPDVSLVINWQMSDTIE 666
Query: 1758 DYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVSTCPPELLNH 1809
Y HRIGRTGRAGK G+A++F T DD + YDL+ + S +S PEL H
Sbjct: 667 KYVHRIGRTGRAGKTGVAITFLTNDDDEVMYDLRIEVEKSKMSKMNPELARH 718
Score = 544 bits (1402), Expect = e-153, Method: Compositional matrix adjust.
Identities = 278/543 (51%), Positives = 379/543 (69%), Gaps = 33/543 (6%)
Query: 583 EGEAIKERYLG--LVKKKRRVRRLNDRKFVFDWDASEDTSV-DYNSIYKERHQV----QF 635
E EA++ RYLG KK R+R+ D+K +FDW+ +DTS D +S +E ++
Sbjct: 182 ELEALRARYLGKRTDGKKPRLRKAQDKKIIFDWNEQDDTSAADQSSWTREVRELVPGGTM 241
Query: 636 FGRGNIAGIDIKAQKRDQSKFYGEMLEKRRTEAEKEQEKVRLKKVKKREEKQKWDDRHWT 695
FG G +AG+D + +S + + LE+RR K K DDRHW+
Sbjct: 242 FG-GRLAGMDGAKKNETRSDNHADPLERRRAV------------------KGKDDDRHWS 282
Query: 696 EKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQ 755
+K LDEM ERDWRIFRED+SI +GG +P P+RNW+E+++P++IL+IIE+IGY EP+PIQ
Sbjct: 283 DKPLDEMKERDWRIFREDFSIAARGGGIPHPLRNWRESAIPSQILDIIEEIGYKEPSPIQ 342
Query: 756 RQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTR 815
RQAIPIG+QNRD+IGVA+TGSGKT AF++P+L +I LP + ++ GPYA+IMAPTR
Sbjct: 343 RQAIPIGMQNRDLIGVAKTGSGKTAAFVIPMLDYIGHLPPL-NDDNRHLGPYALIMAPTR 401
Query: 816 ELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYL 875
ELAQQIE ET +F PLG + V +VGG S EEQ F LR G EI+IATPGRL D+++ L
Sbjct: 402 ELAQQIETETRRFALPLGYKCVSIVGGRSVEEQQFALRDGAEIIIATPGRLKDMVDKSIL 461
Query: 876 VLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKY 935
V++QC Y+V+DEADRM+D+GFE D+ IL+ MP T +KPD A K + +
Sbjct: 462 VMSQCRYVVMDEADRMVDLGFEVDLNFILDSMPATFVKPDDSVALQPTK----EGEWQGW 517
Query: 936 RQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIV-YILSEQDKRKKLMEV 994
R T +F+ATMPPAVERLAR YL +PATV IG+ G+ + +EQ V ++ ++ K+ +L+E+
Sbjct: 518 RVTTLFSATMPPAVERLARKYLIKPATVVIGNAGEAVDTVEQRVEFVHGDEKKKARLIEI 577
Query: 995 LNR-GVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDI 1053
L G+ P+I+FVNQKK AD++ K +++ G + TLH GK QEQRE AL +L+ G +
Sbjct: 578 LRTIGLPPPIIVFVNQKKTADMVVKYVQQAGMSGVTLHSGKSQEQREAALQALRDGEISV 637
Query: 1054 LVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFY 1113
LVATD+AGRGID+ DVS+VIN+ M+ +IE Y HRIGRTGRAGK G+A++F T DD + Y
Sbjct: 638 LVATDLAGRGIDVPDVSLVINWQMSDTIEKYVHRIGRTGRAGKTGVAITFLTNDDDEVMY 697
Query: 1114 DLK 1116
DL+
Sbjct: 698 DLR 700
Score = 318 bits (814), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/375 (46%), Positives = 233/375 (62%), Gaps = 54/375 (14%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMED 60
IIE+IGY EP+PIQRQAIPIG+QNRD+IGVA+TGSGKT AF++P+L +I LP + ++
Sbjct: 329 IIEEIGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVIPMLDYIGHLPPLND-DN 387
Query: 61 ADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIA 120
GPYA+IMAPTRELAQQIE ET +F PLG + V +VGG S EEQ F LR G EI+IA
Sbjct: 388 RHLGPYALIMAPTRELAQQIETETRRFALPLGYKCVSIVGGRSVEEQQFALRDGAEIIIA 447
Query: 121 TPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAED 180
TPGRL D+++ LV++QC Y+V+DEADRM+D+GFE D+ IL+ MP T +KPD A
Sbjct: 448 TPGRLKDMVDKSILVMSQCRYVVMDEADRMVDLGFEVDLNFILDSMPATFVKPDDSVALQ 507
Query: 181 ENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKK 240
K + +R T +F+ATMPP
Sbjct: 508 PTK----EGEWQGWRVTTLFSATMPP---------------------------------- 529
Query: 241 YRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIV-YILSEQDKRKKLME 299
AVERLAR YL +PATV IG+ G+ + +EQ V ++ ++ K+ +L+E
Sbjct: 530 -------------AVERLARKYLIKPATVVIGNAGEAVDTVEQRVEFVHGDEKKKARLIE 576
Query: 300 VLNR-GVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKD 358
+L G+ P+I+FVNQKK AD++ K +++ G + TLH GK QEQRE AL +L+ G
Sbjct: 577 ILRTIGLPPPIIVFVNQKKTADMVVKYVQQAGMSGVTLHSGKSQEQREAALQALRDGEIS 636
Query: 359 ILMAGDRRSRSRSPP 373
+L+A D R P
Sbjct: 637 VLVATDLAGRGIDVP 651
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 48/58 (82%)
Query: 486 PLSLEELLAKKKAEEEARSKPKFLTKEERAAEALRKRQAEVEEMRKKMEEERKKRQEF 543
PLS+E++LAK+KAE+EA +KPKFL+K ER AL KRQ+EV E +++ + ER++R+EF
Sbjct: 4 PLSVEDMLAKQKAEKEAAAKPKFLSKAERQKIALEKRQSEVREQQEREDAERRQREEF 61
>sp|Q54Y81|DDX23_DICDI ATP-dependent RNA helicase ddx23 OS=Dictyostelium discoideum GN=helB2
PE=2 SV=1
Length = 834
Score = 526 bits (1356), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/580 (46%), Positives = 374/580 (64%), Gaps = 18/580 (3%)
Query: 1250 ELNKDKEREGEA---IKERYLGLVKKKRRVRRLNDR-KFVFDWDASEDTSVDYNSIYKER 1305
++N ++RE IK Y+G+ + + R + ++ KFVF+WD+SEDTS DYN++Y ++
Sbjct: 251 QINNKRDREDPELRDIKVDYMGIKRDENRKKIKGEKGKFVFEWDSSEDTSSDYNTLYTKK 310
Query: 1306 HQVQ-FFGRGNIAGIDIKAQKRDQSKFYGEMLEKRRTEAEKEQEKVRLKKVKKR----EE 1360
++Q FG GN G + ++
Sbjct: 311 LEIQPQFGHGNFGGYEKNNNNNGNHYNGNIYNNNNNNNNNNNNNNNINNNNNGSMIGGKQ 370
Query: 1361 KQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEK 1420
+ D HW++K L MT+RDW IF+ED++I+ KGG P+P+R W+E++LP EILE I +
Sbjct: 371 ISELPDTHWSKKPLKSMTKRDWHIFKEDFNISTKGGIAPNPIRTWQESNLPREILEAIRQ 430
Query: 1421 IGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQG 1480
+GY +P+PIQ Q+IPI L RDI+G+AETGSGKT AF++P+L++I P++ + +AD G
Sbjct: 431 LGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPMLIYISKQPRLTKDTEAD-G 489
Query: 1481 PYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGR 1540
PYA++MAPTREL QQIE+ET F G R V +VGG S E+Q +++ GCEI+IATPGR
Sbjct: 490 PYALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQSIEDQAYQVSKGCEIIIATPGR 549
Query: 1541 LIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKP-DTEDAEDENK 1599
L D LE RYLVLNQC YIVLDEAD MID+GFEP V +L+ MP + LK D E AE +
Sbjct: 550 LNDCLEKRYLVLNQCNYIVLDEADMMIDLGFEPQVTSVLDAMPSSFLKSEDDEMAEKQES 609
Query: 1600 LLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQ-IVYILS 1658
+ YR T++F+ATMPP VE+L++ YLRRP T+ IG GK +RI Q ++++ S
Sbjct: 610 -----DRSHIYRTTILFSATMPPLVEKLSKKYLRRPCTITIGEAGKVVDRIRQTVIFVKS 664
Query: 1659 EQDKRKKLMEVLNRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELAL 1718
E DK++ L +++ G P+IIFVN+KK D++A LE+ + LH G+ QEQRE AL
Sbjct: 665 ENDKKEHLTQLIKDGPPPPIIIFVNKKKHCDIIAPVLEECRVSYTILHSGRSQEQREAAL 724
Query: 1719 NSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSF 1778
K ++L+AT VA RGI + V+ VIN+D+ K+IEDYTHRIGRTGRAG GLA SF
Sbjct: 725 EGFKKRKYEVLIATGVASRGIHVDGVTHVINFDIPKNIEDYTHRIGRTGRAGSAGLASSF 784
Query: 1779 CTKDDSHLFYDLKQMMISSPVSTCPPELLNHPDAQHKPGT 1818
T D + YDLKQ++ S+ + P ELL HP +Q K G+
Sbjct: 785 ITDKDVEIMYDLKQILTSTN-NIVPIELLKHPSSQQKHGS 823
Score = 514 bits (1323), Expect = e-144, Method: Compositional matrix adjust.
Identities = 272/625 (43%), Positives = 377/625 (60%), Gaps = 64/625 (10%)
Query: 561 RRDREKKKEDPEEKELNKDKEREGEAIKERYLGLVKKKRRVRRLNDR-KFVFDWDASEDT 619
+RDRE DPE +++ D Y+G+ + + R + ++ KFVF+WD+SEDT
Sbjct: 255 KRDRE----DPELRDIKVD-----------YMGIKRDENRKKIKGEKGKFVFEWDSSEDT 299
Query: 620 SVDYNSIYKERHQVQ-FFGRGNIAGIDIKAQKRDQSKFYGEMLEKRRTEAEKEQEKVRLK 678
S DYN++Y ++ ++Q FG GN G +
Sbjct: 300 SSDYNTLYTKKLEIQPQFGHGNFGGYEKNNNNNGNHYNGNIYNNNNNNNNNNNNNNNINN 359
Query: 679 KVKKR----EEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEAS 734
++ + D HW++K L MT+RDW IF+ED++I+ KGG P+P+R W+E++
Sbjct: 360 NNNGSMIGGKQISELPDTHWSKKPLKSMTKRDWHIFKEDFNISTKGGIAPNPIRTWQESN 419
Query: 735 LPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLP 794
LP EILE I ++GY +P+PIQ Q+IPI L RDI+G+AETGSGKT AF++P+L++I P
Sbjct: 420 LPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPMLIYISKQP 479
Query: 795 KIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRL 854
++ + +AD GPYA++MAPTREL QQIE+ET F G R V +VGG S E+Q +++
Sbjct: 480 RLTKDTEAD-GPYALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQSIEDQAYQVSK 538
Query: 855 GCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKP 914
GCEI+IATPGRL D LE RYLVLNQC YIVLDEAD MID+GFEP V +L+ MP + LK
Sbjct: 539 GCEIIIATPGRLNDCLEKRYLVLNQCNYIVLDEADMMIDLGFEPQVTSVLDAMPSSFLKS 598
Query: 915 -DTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTE 973
D E AE + + YR T++F+ATMPP VE+L++ YLRRP T+ IG GK +
Sbjct: 599 EDDEMAEKQES-----DRSHIYRTTILFSATMPPLVEKLSKKYLRRPCTITIGEAGKVVD 653
Query: 974 RIEQ-IVYILSEQDKRKKLMEVLNRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHG 1032
RI Q ++++ SE DK++ L +++ G P+IIFVN+KK D++A LE+ + LH
Sbjct: 654 RIRQTVIFVKSENDKKEHLTQLIKDGPPPPIIIFVNKKKHCDIIAPVLEECRVSYTILHS 713
Query: 1033 GKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTG 1092
G+ QEQRE AL K ++L+AT VA RGI + V+ VIN+D+ K+IEDYTHRIGRTG
Sbjct: 714 GRSQEQREAALEGFKKRKYEVLIATGVASRGIHVDGVTHVINFDIPKNIEDYTHRIGRTG 773
Query: 1093 RAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVTGRAGKEGLAVSFCTKDDSHLFYDLKQM 1152
RAG GLA SF T D + YDLKQ++ S+
Sbjct: 774 RAGSAGLASSFITDKDVEIMYDLKQILTSTN----------------------------- 804
Query: 1153 MISSPVSTCPPELLNHPDAQHKPGT 1177
+ P ELL HP +Q K G+
Sbjct: 805 ------NIVPIELLKHPSSQQKHGS 823
Score = 310 bits (794), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 164/369 (44%), Positives = 222/369 (60%), Gaps = 55/369 (14%)
Query: 2 IEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDA 61
I ++GY +P+PIQ Q+IPI L RDI+G+AETGSGKT AF++P+L++I P++ + +A
Sbjct: 428 IRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPMLIYISKQPRLTKDTEA 487
Query: 62 DQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIAT 121
D GPYA++MAPTREL QQIE+ET F G R V +VGG S E+Q +++ GCEI+IAT
Sbjct: 488 D-GPYALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQSIEDQAYQVSKGCEIIIAT 546
Query: 122 PGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKP-DTEDAED 180
PGRL D LE RYLVLNQC YIVLDEAD MID+GFEP V +L+ MP + LK D E AE
Sbjct: 547 PGRLNDCLEKRYLVLNQCNYIVLDEADMMIDLGFEPQVTSVLDAMPSSFLKSEDDEMAEK 606
Query: 181 ENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKK 240
+ + YR T++F+ATMPP
Sbjct: 607 QES-----DRSHIYRTTILFSATMPP---------------------------------- 627
Query: 241 YRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQ-IVYILSEQDKRKKLME 299
VE+L++ YLRRP T+ IG GK +RI Q ++++ SE DK++ L +
Sbjct: 628 -------------LVEKLSKKYLRRPCTITIGEAGKVVDRIRQTVIFVKSENDKKEHLTQ 674
Query: 300 VLNRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDI 359
++ G P+IIFVN+KK D++A LE+ + LH G+ QEQRE AL K ++
Sbjct: 675 LIKDGPPPPIIIFVNKKKHCDIIAPVLEECRVSYTILHSGRSQEQREAALEGFKKRKYEV 734
Query: 360 LMAGDRRSR 368
L+A SR
Sbjct: 735 LIATGVASR 743
>sp|A4RK80|PRP28_MAGO7 Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Magnaporthe
oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958)
GN=PRP28 PE=3 SV=1
Length = 674
Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust.
Identities = 263/562 (46%), Positives = 364/562 (64%), Gaps = 45/562 (8%)
Query: 1264 ERYLGLVKK------KRRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFGRGNIA 1317
ERY G K ++ RR D+KF FDWD +DTS + Y+E
Sbjct: 147 ERYTGPPAKVSTFSANKKRRRTTDQKFNFDWDPKDDTSQPWR--YEE------------- 191
Query: 1318 GIDIKAQKRDQSKFYGEMLEKRRTEAEKEQEKVRLKKVKKREEKQKWDDRHWTEKSLDEM 1377
A +R + G + RR +A ++ RL W +K L +M
Sbjct: 192 ---TGAHERSAN---GATEQVRRKKATRDYNDPRLVP--------------WQDKELSQM 231
Query: 1378 TERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIG 1437
T RDWR+F+ + I KG +P+P+R W+E++LP + + I+++GY EPTP+QR AIPI
Sbjct: 232 TTRDWRLFKVNLEIVTKGNNIPNPMRFWEESNLPHVLKDTIKQVGYTEPTPVQRAAIPIA 291
Query: 1438 LQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIE 1497
LQ RD+IG+++TGSGKT AF+LP+L +I+ LP + + +GPYA+I+APTRELA QI+
Sbjct: 292 LQCRDLIGISKTGSGKTAAFVLPMLSYIEPLPPLNEVTKT-EGPYALILAPTRELATQIQ 350
Query: 1498 EETNKFGTPLGIRTVLVVGG-LSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCT 1556
E KF T +G V ++G + EE F LR G EI++ATPGRL+D LE LVL+QC+
Sbjct: 351 AEVIKFATRMGFTVVCLIGNKRTIEEDAFALRNGAEIIVATPGRLVDCLERHLLVLSQCS 410
Query: 1557 YIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMF 1616
Y+VLDEADRM+D GFE + KIL +P +N KPD DAED N + +YRQTVM+
Sbjct: 411 YVVLDEADRMVDGGFEDSIHKILAALPPSNGKPDDRDAEDPNIMSKFLTPNLRYRQTVMY 470
Query: 1617 TATMPPAVERLARSYLRRPATVYIGSVGKPTERIE-QIVYILSEQDKRKKLMEVLNR-GV 1674
+ATMPP+VER+A++YL+ PA V IG++G+ + +E Q ++++SE ++R KL +LN G
Sbjct: 471 SATMPPSVERIAKNYLKHPAMVTIGTIGEAVDTVEQQAMWVVSEDERRNKLRAMLNTYGT 530
Query: 1675 KKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDV 1734
K VI+FVN K D +AK L+ ++A TLHG K Q+QRE AL S + G ++LVATDV
Sbjct: 531 GKLVIVFVNTKSNCDAVAKDLKSSSFSAVTLHGNKTQDQREAALQSFRDGRTNVLVATDV 590
Query: 1735 AGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMM 1794
A RG+DI DVS+VIN++MA +IE YTHRIGRTGRAGKEG+A++FC +D + Y LKQ+M
Sbjct: 591 AARGLDIPDVSLVINFNMAGTIEVYTHRIGRTGRAGKEGMAITFCGPEDHGVLYHLKQIM 650
Query: 1795 ISSPVSTCPPELLNHPDAQHKP 1816
S +S PP L +HP+AQ KP
Sbjct: 651 SKSQMSKVPPWLKDHPEAQSKP 672
Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust.
Identities = 265/596 (44%), Positives = 365/596 (61%), Gaps = 79/596 (13%)
Query: 589 ERYLGLVKK------KRRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFGRGNIA 642
ERY G K ++ RR D+KF FDWD +DTS + Y+E
Sbjct: 147 ERYTGPPAKVSTFSANKKRRRTTDQKFNFDWDPKDDTSQPWR--YEE------------- 191
Query: 643 GIDIKAQKRDQSKFYGEMLEKRRTEAEKEQEKVRLKKVKKREEKQKWDDRHWTEKSLDEM 702
A +R + G + RR +A ++ RL W +K L +M
Sbjct: 192 ---TGAHERSAN---GATEQVRRKKATRDYNDPRLVP--------------WQDKELSQM 231
Query: 703 TERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIG 762
T RDWR+F+ + I KG +P+P+R W+E++LP + + I+++GY EPTP+QR AIPI
Sbjct: 232 TTRDWRLFKVNLEIVTKGNNIPNPMRFWEESNLPHVLKDTIKQVGYTEPTPVQRAAIPIA 291
Query: 763 LQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIE 822
LQ RD+IG+++TGSGKT AF+LP+L +I+ LP + + +GPYA+I+APTRELA QI+
Sbjct: 292 LQCRDLIGISKTGSGKTAAFVLPMLSYIEPLPPLNEVTKT-EGPYALILAPTRELATQIQ 350
Query: 823 EETNKFGTPLGIRTVLVVGG-LSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCT 881
E KF T +G V ++G + EE F LR G EI++ATPGRL+D LE LVL+QC+
Sbjct: 351 AEVIKFATRMGFTVVCLIGNKRTIEEDAFALRNGAEIIVATPGRLVDCLERHLLVLSQCS 410
Query: 882 YIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMF 941
Y+VLDEADRM+D GFE + KIL +P +N KPD DAED N + +YRQTVM+
Sbjct: 411 YVVLDEADRMVDGGFEDSIHKILAALPPSNGKPDDRDAEDPNIMSKFLTPNLRYRQTVMY 470
Query: 942 TATMPPAVERLARSYLRRPATVYIGSVGKPTERIE-QIVYILSEQDKRKKLMEVLNR-GV 999
+ATMPP+VER+A++YL+ PA V IG++G+ + +E Q ++++SE ++R KL +LN G
Sbjct: 471 SATMPPSVERIAKNYLKHPAMVTIGTIGEAVDTVEQQAMWVVSEDERRNKLRAMLNTYGT 530
Query: 1000 KKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDV 1059
K VI+FVN K D +AK L+ ++A TLHG K Q+QRE AL S + G ++LVATDV
Sbjct: 531 GKLVIVFVNTKSNCDAVAKDLKSSSFSAVTLHGNKTQDQREAALQSFRDGRTNVLVATDV 590
Query: 1060 AGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMM 1119
A RG+DI DVS+VIN++MA +IE YTHRIGRTGRAGKEG+A++FC +D + Y LKQ+M
Sbjct: 591 AARGLDIPDVSLVINFNMAGTIEVYTHRIGRTGRAGKEGMAITFCGPEDHGVLYHLKQIM 650
Query: 1120 ISSPVTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVSTCPPELLNHPDAQHKP 1175
S QM S PP L +HP+AQ KP
Sbjct: 651 SKS----------------------------QM------SKVPPWLKDHPEAQSKP 672
Score = 314 bits (805), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 165/375 (44%), Positives = 229/375 (61%), Gaps = 51/375 (13%)
Query: 2 IEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDA 61
I+++GY EPTP+QR AIPI LQ RD+IG+++TGSGKT AF+LP+L +I+ LP + +
Sbjct: 272 IKQVGYTEPTPVQRAAIPIALQCRDLIGISKTGSGKTAAFVLPMLSYIEPLPPLNEVTKT 331
Query: 62 DQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGG-LSREEQGFRLRLGCEIVIA 120
+GPYA+I+APTRELA QI+ E KF T +G V ++G + EE F LR G EI++A
Sbjct: 332 -EGPYALILAPTRELATQIQAEVIKFATRMGFTVVCLIGNKRTIEEDAFALRNGAEIIVA 390
Query: 121 TPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAED 180
TPGRL+D LE LVL+QC+Y+VLDEADRM+D GFE + KIL +P +N KPD DAED
Sbjct: 391 TPGRLVDCLERHLLVLSQCSYVVLDEADRMVDGGFEDSIHKILAALPPSNGKPDDRDAED 450
Query: 181 ENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKK 240
N + +YRQTVM++ATMPP
Sbjct: 451 PNIMSKFLTPNLRYRQTVMYSATMPP---------------------------------- 476
Query: 241 YRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIE-QIVYILSEQDKRKKLME 299
+VER+A++YL+ PA V IG++G+ + +E Q ++++SE ++R KL
Sbjct: 477 -------------SVERIAKNYLKHPAMVTIGTIGEAVDTVEQQAMWVVSEDERRNKLRA 523
Query: 300 VLNR-GVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKD 358
+LN G K VI+FVN K D +AK L+ ++A TLHG K Q+QRE AL S + G +
Sbjct: 524 MLNTYGTGKLVIVFVNTKSNCDAVAKDLKSSSFSAVTLHGNKTQDQREAALQSFRDGRTN 583
Query: 359 ILMAGDRRSRSRSPP 373
+L+A D +R P
Sbjct: 584 VLVATDVAARGLDIP 598
>sp|Q6C024|PRP28_YARLI Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=PRP28 PE=3 SV=1
Length = 575
Score = 493 bits (1270), Expect = e-138, Method: Compositional matrix adjust.
Identities = 251/537 (46%), Positives = 347/537 (64%), Gaps = 55/537 (10%)
Query: 1283 KFVFDWDASEDTSVDYNSIYKERHQVQFFGRGNIAGIDIKAQKRDQSKFYGEMLEKRRTE 1342
KF FDW A++DTS Y Y G G + K QKRD
Sbjct: 86 KFSFDWSAADDTSKAYQPSYSIDS-----GDGQVP----KRQKRD--------------- 121
Query: 1343 AEKEQEKVRLKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGG-KVPDP 1401
+D HW++K ++ MT RDWRIF+EDYSI KGG +P+P
Sbjct: 122 ---------------------LEDAHWSDKPVESMTSRDWRIFKEDYSIVTKGGGNIPNP 160
Query: 1402 VRNWKEAS-LPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLP 1460
+R+W E +P + + I ++GY EPTPIQR AIPI L RD+IGVAETGSGKT +FL+P
Sbjct: 161 LRSWNECKEIPGIVRDTISRMGYKEPTPIQRAAIPIALGIRDVIGVAETGSGKTASFLIP 220
Query: 1461 LLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSR 1520
L+ +I LPK+ + GPY +I+APTRELA QI++E KF PLG + V VVGG S
Sbjct: 221 LISYICELPKLDERSKVN-GPYGLILAPTRELAMQIKDEAVKFCAPLGFKVVSVVGGYSA 279
Query: 1521 EEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILE 1580
+EQ ++ G E+++ATPGRL+DV++ R LVLNQC Y+V+DEADRM+DMGFE VQK+L
Sbjct: 280 QEQALAVQEGAELIVATPGRLLDVIDRRLLVLNQCCYVVMDEADRMVDMGFEEQVQKVLA 339
Query: 1581 YMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYI 1640
+P +N KPD+++AE+ + S ++YRQT+M+TATMP A+E+LA+ YLRRP V I
Sbjct: 340 SLPSSNAKPDSDEAENLAAV-----STRRYRQTMMYTATMPVAIEKLAKKYLRRPGIVTI 394
Query: 1641 GSVGKPTERIEQIVYILSEQDKRKK-LMEVLN-RGVKKPVIIFVNQKKGADVLAKGLEKL 1698
GS G+ + Q+V L+ +KRK+ L+++++ R + P+++F+N K+ + ++ L
Sbjct: 395 GSAGQAGSTVTQLVEFLNTDEKRKRRLLDIISKRQYRPPIVVFLNYKRDCEAVSDALVAA 454
Query: 1699 GYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIED 1758
G+ +HGGK QEQRE A+ LK G+ D+LVATDVAGRG+DI +VS+V+N+ MA +IE
Sbjct: 455 GWRTAIIHGGKQQEQREQAVQHLKRGAVDVLVATDVAGRGLDIPNVSLVVNFQMANNIES 514
Query: 1759 YTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVSTCPPELLNHPDAQHK 1815
YTHRIGRTGRAGK G AV+F ++D + ++LKQM+ S S EL HP A+ K
Sbjct: 515 YTHRIGRTGRAGKRGTAVTFLGQEDDDVLFELKQMISRSEASPNNQELSRHPAARMK 571
Score = 490 bits (1262), Expect = e-137, Method: Compositional matrix adjust.
Identities = 268/638 (42%), Positives = 382/638 (59%), Gaps = 93/638 (14%)
Query: 486 PLSLEELLAKKKAEEEARSKPKFLTKEERAAEALRKRQAEVEEMRKKMEEERKKRQEFTK 545
P+S+EEL A + ++EA SKPKF++K +RA A + +Q + + ++
Sbjct: 2 PVSIEELKALQVQKKEA-SKPKFISKAKRAEMAAKAKQIQ--------------KNTTSE 46
Query: 546 EASFESKRENFDARLRRDREKKKEDPEEKELNKDKEREGEAIKERYLGLVKKKRRVRRLN 605
E + + R D + +E + K K G
Sbjct: 47 ETTLKDIRSTTDLKRSVVQETVETTKPLPSKPKPKSTSG--------------------- 85
Query: 606 DRKFVFDWDASEDTSVDYNSIYKERHQVQFFGRGNIAGIDIKAQKRDQSKFYGEMLEKRR 665
KF FDW A++DTS Y Y G G + K QKRD
Sbjct: 86 --KFSFDWSAADDTSKAYQPSYSIDS-----GDGQVP----KRQKRD------------- 121
Query: 666 TEAEKEQEKVRLKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGG-KVP 724
+D HW++K ++ MT RDWRIF+EDYSI KGG +P
Sbjct: 122 -----------------------LEDAHWSDKPVESMTSRDWRIFKEDYSIVTKGGGNIP 158
Query: 725 DPVRNWKEAS-LPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFL 783
+P+R+W E +P + + I ++GY EPTPIQR AIPI L RD+IGVAETGSGKT +FL
Sbjct: 159 NPLRSWNECKEIPGIVRDTISRMGYKEPTPIQRAAIPIALGIRDVIGVAETGSGKTASFL 218
Query: 784 LPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGL 843
+PL+ +I LPK+ + GPY +I+APTRELA QI++E KF PLG + V VVGG
Sbjct: 219 IPLISYICELPKLDERSKVN-GPYGLILAPTRELAMQIKDEAVKFCAPLGFKVVSVVGGY 277
Query: 844 SREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKI 903
S +EQ ++ G E+++ATPGRL+DV++ R LVLNQC Y+V+DEADRM+DMGFE VQK+
Sbjct: 278 SAQEQALAVQEGAELIVATPGRLLDVIDRRLLVLNQCCYVVMDEADRMVDMGFEEQVQKV 337
Query: 904 LEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATV 963
L +P +N KPD+++AE+ + S ++YRQT+M+TATMP A+E+LA+ YLRRP V
Sbjct: 338 LASLPSSNAKPDSDEAENLAAV-----STRRYRQTMMYTATMPVAIEKLAKKYLRRPGIV 392
Query: 964 YIGSVGKPTERIEQIVYILSEQDKRK-KLMEVLN-RGVKKPVIIFVNQKKGADVLAKGLE 1021
IGS G+ + Q+V L+ +KRK +L+++++ R + P+++F+N K+ + ++ L
Sbjct: 393 TIGSAGQAGSTVTQLVEFLNTDEKRKRRLLDIISKRQYRPPIVVFLNYKRDCEAVSDALV 452
Query: 1022 KLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSI 1081
G+ +HGGK QEQRE A+ LK G+ D+LVATDVAGRG+DI +VS+V+N+ MA +I
Sbjct: 453 AAGWRTAIIHGGKQQEQREQAVQHLKRGAVDVLVATDVAGRGLDIPNVSLVVNFQMANNI 512
Query: 1082 EDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMM 1119
E YTHRIGRTGRAGK G AV+F ++D + ++LKQM+
Sbjct: 513 ESYTHRIGRTGRAGKRGTAVTFLGQEDDDVLFELKQMI 550
Score = 311 bits (797), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/374 (43%), Positives = 229/374 (61%), Gaps = 55/374 (14%)
Query: 2 IEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDA 61
I ++GY EPTPIQR AIPI L RD+IGVAETGSGKT +FL+PL+ +I LPK+
Sbjct: 178 ISRMGYKEPTPIQRAAIPIALGIRDVIGVAETGSGKTASFLIPLISYICELPKLDERSKV 237
Query: 62 DQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIAT 121
+ GPY +I+APTRELA QI++E KF PLG + V VVGG S +EQ ++ G E+++AT
Sbjct: 238 N-GPYGLILAPTRELAMQIKDEAVKFCAPLGFKVVSVVGGYSAQEQALAVQEGAELIVAT 296
Query: 122 PGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDE 181
PGRL+DV++ R LVLNQC Y+V+DEADRM+DMGFE VQK+L +P +N KPD+++AE+
Sbjct: 297 PGRLLDVIDRRLLVLNQCCYVVMDEADRMVDMGFEEQVQKVLASLPSSNAKPDSDEAENL 356
Query: 182 NKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKY 241
+ S ++YRQT+M+TATMP
Sbjct: 357 AAV-----STRRYRQTMMYTATMP------------------------------------ 375
Query: 242 RQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRK-KLMEV 300
A+E+LA+ YLRRP V IGS G+ + Q+V L+ +KRK +L+++
Sbjct: 376 -----------VAIEKLAKKYLRRPGIVTIGSAGQAGSTVTQLVEFLNTDEKRKRRLLDI 424
Query: 301 LN-RGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDI 359
++ R + P+++F+N K+ + ++ L G+ +HGGK QEQRE A+ LK G+ D+
Sbjct: 425 ISKRQYRPPIVVFLNYKRDCEAVSDALVAAGWRTAIIHGGKQQEQREQAVQHLKRGAVDV 484
Query: 360 LMAGDRRSRSRSPP 373
L+A D R P
Sbjct: 485 LVATDVAGRGLDIP 498
>sp|Q9FZ92|RH44_ARATH Putative DEAD-box ATP-dependent RNA helicase 44 OS=Arabidopsis
thaliana GN=RH44 PE=5 SV=2
Length = 622
Score = 467 bits (1201), Expect = e-130, Method: Compositional matrix adjust.
Identities = 265/568 (46%), Positives = 354/568 (62%), Gaps = 67/568 (11%)
Query: 1255 KEREGEAIKERYLGLVKKKRRVRRLNDRKFVFDWDASEDT-SVDYNSIYKERHQVQ-FFG 1312
+E+E A+KE+YLG K K+RV + F FDW+ +EDT S + N +Y+ H+ Q FG
Sbjct: 110 REKEINAMKEQYLGTTKPKKRVIMKPSKNFRFDWENTEDTLSGEMNVLYQNPHEAQPLFG 169
Query: 1313 RGNIAGIDIKAQKRDQSKFYGEMLEKRRTEAEKEQEKVRLKKVKKREEKQKWDDRHWTEK 1372
RG AGID + QK+ L K EK++ +D+HW+EK
Sbjct: 170 RGCRAGIDRREQKK-------------------------LMTGKHEREKREEEDKHWSEK 204
Query: 1373 SLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQ 1432
L+EM ERDWRIF+ED++I+ +G K+P P+RNW+E
Sbjct: 205 KLEEMNERDWRIFKEDFNISYRGSKIPHPMRNWEET------------------------ 240
Query: 1433 AIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTREL 1492
IP+GL+ RD+IG++ TGSGKT AF+LP+L +I LP + R E+ +GPYA++M PTREL
Sbjct: 241 -IPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPM-REENQTEGPYALVMVPTREL 298
Query: 1493 AQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVL 1552
A QIEEET KF LG + V + G S E+Q +L GCEIVIATPGRL+D LE RY+VL
Sbjct: 299 AHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVL 358
Query: 1553 NQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQ 1612
NQC Y+VLDEADRMIDM FEP V ++L+ MP +NLKP+ ED E E K + YR
Sbjct: 359 NQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKI--------YRT 410
Query: 1613 TVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKKLMEVL-N 1671
T MF+ATM +VERLAR +LR P V ++G+ T+ I Q V + E DK +L +++ +
Sbjct: 411 TYMFSATMLLSVERLARKFLRNPVVV---TIGETTKFITQQVIMTKESDKFSRLKKLIDD 467
Query: 1672 RGVKKPVIIFVNQKKGADVLAKGLEKLG-YNACTLHGGKGQEQRELALNSLKGGSKDILV 1730
G K I+FVN + D + K LEK+G TLH GK QEQR+ +L K ++LV
Sbjct: 468 LGDDKTAIVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLV 527
Query: 1731 ATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDL 1790
TDV GRG+DI D++ VINYDM +++ YTHRIGRTGRAGK G+A +F T +D +FY L
Sbjct: 528 TTDVLGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTLEDKDVFYGL 587
Query: 1791 KQMMISSPVSTCPPELLNHPDAQHKPGT 1818
KQ + + S PPEL H ++ KPGT
Sbjct: 588 KQKL-NECNSLVPPELARHEASKFKPGT 614
Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust.
Identities = 290/701 (41%), Positives = 397/701 (56%), Gaps = 115/701 (16%)
Query: 493 LAKKKAEEEARSKPKFLTKEERAAEALRKRQAEVEEMRKKM------------EEERKKR 540
+ KK + + +KP FLTK R AL++ Q E+ + ++ + R +
Sbjct: 13 MEKKTLDFDNLTKPVFLTKAHRKELALKRCQDEIADRDRRSIVQISRSNSDNDDGNRPRD 72
Query: 541 QEFTKEASFESKRENFDARLRRDREKKKEDPEEKELNKDKEREGEAIKERYLGLVKKKRR 600
+ + S + R R R+RE K E+ E+ K +E+E A+KE+YLG K K+R
Sbjct: 73 VKRERHRSHDHDRNRESDREFREREVKAR-VEKLEMVK-REKEINAMKEQYLGTTKPKKR 130
Query: 601 VRRLNDRKFVFDWDASEDT-SVDYNSIYKERHQVQ-FFGRGNIAGIDIKAQKRDQSKFYG 658
V + F FDW+ +EDT S + N +Y+ H+ Q FGRG AGID + QK+
Sbjct: 131 VIMKPSKNFRFDWENTEDTLSGEMNVLYQNPHEAQPLFGRGCRAGIDRREQKK------- 183
Query: 659 EMLEKRRTEAEKEQEKVRLKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITI 718
L K EK++ +D+HW+EK L+EM ERDWRIF+ED++I+
Sbjct: 184 ------------------LMTGKHEREKREEEDKHWSEKKLEEMNERDWRIFKEDFNISY 225
Query: 719 KGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGK 778
+G K+P P+RNW+E IP+GL+ RD+IG++ TGSGK
Sbjct: 226 RGSKIPHPMRNWEET-------------------------IPLGLEQRDVIGISATGSGK 260
Query: 779 TLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVL 838
T AF+LP+L +I LP + R E+ +GPYA++M PTRELA QIEEET KF LG + V
Sbjct: 261 TAAFVLPMLAYISRLPPM-REENQTEGPYALVMVPTRELAHQIEEETVKFSRYLGFKAVS 319
Query: 839 VVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEP 898
+ G S E+Q +L GCEIVIATPGRL+D LE RY+VLNQC Y+VLDEADRMIDM FEP
Sbjct: 320 ITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCNYLVLDEADRMIDMDFEP 379
Query: 899 DVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLR 958
V ++L+ MP +NLKP+ ED E E K + YR T MF+ATM +VERLAR +LR
Sbjct: 380 QVSEVLDVMPCSNLKPEKEDEELEEKKI--------YRTTYMFSATMLLSVERLARKFLR 431
Query: 959 RPATVYIGSVGKPTERIEQIVYILSEQDKRKKLMEVL-NRGVKKPVIIFVNQKKGADVLA 1017
P V ++G+ T+ I Q V + E DK +L +++ + G K I+FVN + D +
Sbjct: 432 NPVVV---TIGETTKFITQQVIMTKESDKFSRLKKLIDDLGDDKTAIVFVNTRNKVDYIV 488
Query: 1018 KGLEKLG-YNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYD 1076
K LEK+G TLH GK QEQR+ +L K ++LV TDV GRG+DI D++ VINYD
Sbjct: 489 KNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDILDLAQVINYD 548
Query: 1077 MAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVTGRAGKEGLAVS 1136
M +++ YTHRIGRTGRAGK G+A +F T +D +FY LKQ ++
Sbjct: 549 MPNTMDLYTHRIGRTGRAGKTGVATTFLTLEDKDVFYGLKQ----------------KLN 592
Query: 1137 FCTKDDSHLFYDLKQMMISSPVSTCPPELLNHPDAQHKPGT 1177
C S PPEL H ++ KPGT
Sbjct: 593 ECN-------------------SLVPPELARHEASKFKPGT 614
Score = 258 bits (659), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 158/363 (43%), Positives = 209/363 (57%), Gaps = 63/363 (17%)
Query: 6 GYAEPTPIQR--QAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQ 63
G P P++ + IP+GL+ RD+IG++ TGSGKT AF+LP+L +I LP + R E+ +
Sbjct: 227 GSKIPHPMRNWEETIPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPM-REENQTE 285
Query: 64 GPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPG 123
GPYA++M PTRELA QIEEET KF LG + V + G S E+Q +L GCEIVIATPG
Sbjct: 286 GPYALVMVPTRELAHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPG 345
Query: 124 RLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENK 183
RL+D LE RY+VLNQC Y+VLDEADRMIDM FEP V ++L+ MP +NLKP+ ED E E K
Sbjct: 346 RLLDCLERRYVVLNQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEK 405
Query: 184 LLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQ 243
+ YR T MF+ATM LL
Sbjct: 406 KI--------YRTTYMFSATM--------------------------LL----------- 420
Query: 244 TVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKKLMEVL-N 302
+VERLAR +LR P V ++G+ T+ I Q V + E DK +L +++ +
Sbjct: 421 ----------SVERLARKFLRNPVVV---TIGETTKFITQQVIMTKESDKFSRLKKLIDD 467
Query: 303 RGVKKPVIIFVNQKKGADVLAKGLEKLG-YNACTLHGGKGQEQRELALNSLKGGSKDILM 361
G K I+FVN + D + K LEK+G TLH GK QEQR+ +L K ++L+
Sbjct: 468 LGDDKTAIVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLV 527
Query: 362 AGD 364
D
Sbjct: 528 TTD 530
>sp|A3LNL1|PRP28_PICST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Scheffersomyces
stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 /
NRRL Y-11545) GN=PRP28 PE=3 SV=2
Length = 482
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/466 (45%), Positives = 296/466 (63%), Gaps = 30/466 (6%)
Query: 1368 HWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEII-EKIGYAEP 1426
HW+EKSLD+MT RDWRIFREDY IT KGG + +P+R W EAS+P+++L II +K+ Y EP
Sbjct: 21 HWSEKSLDQMTARDWRIFREDYGITSKGGDIDNPLRTWNEASIPSKLLSIIVDKLEYLEP 80
Query: 1427 TPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKI-----ARMEDADQGP 1481
TPIQR AIP+ L RD++G+AETGSGKTLAFL+PLL +I + K + E P
Sbjct: 81 TPIQRAAIPLALNQRDVVGIAETGSGKTLAFLIPLLSYILNTDKNYLEYEHQQEQNYNKP 140
Query: 1482 YAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRL 1541
+I+APTRELAQQI +E KFG LG+ V ++GG EE +R G +V+ATPGRL
Sbjct: 141 LGLILAPTRELAQQITKEAQKFGDRLGLNVVSIIGGHQYEETVHSIRTGVHVVVATPGRL 200
Query: 1542 IDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLL 1601
+D LE + L++C Y+++DEADRMIDMGFE +Q IL Y+P T+ T D+
Sbjct: 201 VDSLERNIIGLDKCYYLIMDEADRMIDMGFEKALQSILSYVPSTDRLNSTIDS------- 253
Query: 1602 ANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYIL---- 1657
++ KK R T+MFTAT+ P +E++ +++L +P +YIG G+ + I Q L
Sbjct: 254 MIFHIKK--RITLMFTATISPPIEKITKNFLIKPGYLYIGGAGEALDHIVQNFEYLGSAT 311
Query: 1658 -SEQDKRKKLMEVLNRGVKK--------PVIIFVNQKKGADVLAKGLEKLGY-NACTLHG 1707
+D K + L R +++ +IIF N K+ D+L+ LEK G+ + +HG
Sbjct: 312 GGSEDFDSKRFDKLVRIIQQHSRESRQFSIIIFANYKRVCDLLSLELEKNGFRDNVVIHG 371
Query: 1708 GKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTG 1767
K QE RE A++S + IL+ATDVA RGID+ +VS+V+N+ M++ ++Y HRIGRTG
Sbjct: 372 SKTQELREKAISSFRSHESRILIATDVAARGIDVPNVSLVVNFQMSRKFDEYVHRIGRTG 431
Query: 1768 RAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVSTCPPELLNHPDAQ 1813
RAG G + +F DS +F DLK+ +++ CP L+ H Q
Sbjct: 432 RAGNRGESYTFIDDSDSDVFIDLKKFLVNGG-KKCPDWLIKHASTQ 476
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/449 (45%), Positives = 290/449 (64%), Gaps = 29/449 (6%)
Query: 693 HWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEII-EKIGYAEP 751
HW+EKSLD+MT RDWRIFREDY IT KGG + +P+R W EAS+P+++L II +K+ Y EP
Sbjct: 21 HWSEKSLDQMTARDWRIFREDYGITSKGGDIDNPLRTWNEASIPSKLLSIIVDKLEYLEP 80
Query: 752 TPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKI-----ARMEDADQGP 806
TPIQR AIP+ L RD++G+AETGSGKTLAFL+PLL +I + K + E P
Sbjct: 81 TPIQRAAIPLALNQRDVVGIAETGSGKTLAFLIPLLSYILNTDKNYLEYEHQQEQNYNKP 140
Query: 807 YAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRL 866
+I+APTRELAQQI +E KFG LG+ V ++GG EE +R G +V+ATPGRL
Sbjct: 141 LGLILAPTRELAQQITKEAQKFGDRLGLNVVSIIGGHQYEETVHSIRTGVHVVVATPGRL 200
Query: 867 IDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLL 926
+D LE + L++C Y+++DEADRMIDMGFE +Q IL Y+P T+ T D+
Sbjct: 201 VDSLERNIIGLDKCYYLIMDEADRMIDMGFEKALQSILSYVPSTDRLNSTIDS------- 253
Query: 927 ANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYIL---- 982
++ KK R T+MFTAT+ P +E++ +++L +P +YIG G+ + I Q L
Sbjct: 254 MIFHIKK--RITLMFTATISPPIEKITKNFLIKPGYLYIGGAGEALDHIVQNFEYLGSAT 311
Query: 983 -SEQDKRKKLMEVLNRGVKK--------PVIIFVNQKKGADVLAKGLEKLGY-NACTLHG 1032
+D K + L R +++ +IIF N K+ D+L+ LEK G+ + +HG
Sbjct: 312 GGSEDFDSKRFDKLVRIIQQHSRESRQFSIIIFANYKRVCDLLSLELEKNGFRDNVVIHG 371
Query: 1033 GKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTG 1092
K QE RE A++S + IL+ATDVA RGID+ +VS+V+N+ M++ ++Y HRIGRTG
Sbjct: 372 SKTQELREKAISSFRSHESRILIATDVAARGIDVPNVSLVVNFQMSRKFDEYVHRIGRTG 431
Query: 1093 RAGKEGLAVSFCTKDDSHLFYDLKQMMIS 1121
RAG G + +F DS +F DLK+ +++
Sbjct: 432 RAGNRGESYTFIDDSDSDVFIDLKKFLVN 460
Score = 229 bits (585), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 143/392 (36%), Positives = 205/392 (52%), Gaps = 75/392 (19%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKI----- 55
I++K+ Y EPTPIQR AIP+ L RD++G+AETGSGKTLAFL+PLL +I + K
Sbjct: 71 IVDKLEYLEPTPIQRAAIPLALNQRDVVGIAETGSGKTLAFLIPLLSYILNTDKNYLEYE 130
Query: 56 ARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGC 115
+ E P +I+APTRELAQQI +E KFG LG+ V ++GG EE +R G
Sbjct: 131 HQQEQNYNKPLGLILAPTRELAQQITKEAQKFGDRLGLNVVSIIGGHQYEETVHSIRTGV 190
Query: 116 EIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDT 175
+V+ATPGRL+D LE + L++C Y+++DEADRMIDMGFE +Q IL Y+P T+ T
Sbjct: 191 HVVVATPGRLVDSLERNIIGLDKCYYLIMDEADRMIDMGFEKALQSILSYVPSTDRLNST 250
Query: 176 EDAEDENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANY 235
D+ ++ KK R T+MFTAT+ P
Sbjct: 251 IDS-------MIFHIKK--RITLMFTATISP----------------------------- 272
Query: 236 NSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYIL-----SE 290
+E++ +++L +P +YIG G+ + I Q L
Sbjct: 273 ------------------PIEKITKNFLIKPGYLYIGGAGEALDHIVQNFEYLGSATGGS 314
Query: 291 QDKRKKLMEVLNRGVKK--------PVIIFVNQKKGADVLAKGLEKLGY-NACTLHGGKG 341
+D K + L R +++ +IIF N K+ D+L+ LEK G+ + +HG K
Sbjct: 315 EDFDSKRFDKLVRIIQQHSRESRQFSIIIFANYKRVCDLLSLELEKNGFRDNVVIHGSKT 374
Query: 342 QEQRELALNSLKGGSKDILMAGDRRSRSRSPP 373
QE RE A++S + IL+A D +R P
Sbjct: 375 QELREKAISSFRSHESRILIATDVAARGIDVP 406
>sp|Q6BLU9|PRP28_DEBHA Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=PRP28 PE=3 SV=2
Length = 580
Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust.
Identities = 250/654 (38%), Positives = 346/654 (52%), Gaps = 126/654 (19%)
Query: 484 KEPLSLEELLAKKKAEEEARSKPKFLTKEERAAEALRKRQAEVEEMRKKMEEERKKRQEF 543
K P+S+EEL+ K ++ E SKPKFL+K ER +L++ Q E + KKRQ+
Sbjct: 3 KRPISVEELIGKSQSAE-VISKPKFLSKSERQKLSLQRNQ----------EIQDKKRQQS 51
Query: 544 TKEASFESKRENFDARLRRDREKKKEDPEEKELNKDKEREGEAIKERYLGLVKKKRRVRR 603
T + + N ED E + K ++G
Sbjct: 52 TVNNGAKKRYNN-----------SIEDNPEPKKINKKLKKG------------------- 81
Query: 604 LNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFGRGNIAGIDIKAQKRDQSKFYGEMLEK 663
R F FDWD EDTS +Y + V++ R N + +
Sbjct: 82 ---RNFNFDWDEEEDTSNNYQPL------VRYDNRTNPPDLGLS---------------- 116
Query: 664 RRTEAEKEQEKVRLKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKV 723
D HW+EK +D+MT RDWRIF+EDY+IT KGG +
Sbjct: 117 ---------------------------DMHWSEKQIDDMTTRDWRIFKEDYNITSKGGDI 149
Query: 724 PDPVRNWKEASLPTEILEI-IEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAF 782
+P+R W E+ LP ++L I I+ +GY PTPIQR +IP+ L RDI+G+AETGSGKTLAF
Sbjct: 150 ENPLRCWAESKLPAKLLNILIKNLGYDSPTPIQRASIPLALNGRDIVGIAETGSGKTLAF 209
Query: 783 LLPLLVWIQSLPKIARMEDADQ-----GPYAIIMAPTRELAQQIEEETNKFGTPLGIRTV 837
LLPL +I S+ + + Q P +I+APTRELA QI +E FG L + V
Sbjct: 210 LLPLFSYILSVDSNYLLYEHQQESNFNKPLGLILAPTRELALQITKEAKLFGDKLNLNVV 269
Query: 838 LVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFE 897
++GG EE +R G IV+ATPGRLID LE + L+ C + +DEAD+MIDMGFE
Sbjct: 270 TIIGGHQYEETVHSVRNGVHIVVATPGRLIDSLERGIINLSNCYFFTMDEADKMIDMGFE 329
Query: 898 PDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYL 957
+Q IL Y+P + T D + +N KK R T+MFTAT+ P +E++ ++YL
Sbjct: 330 KSLQSILNYLPASEKLETTIDGKI-------FNIKK--RITLMFTATISPPIEKITKNYL 380
Query: 958 RRPATVYIGSVGKPTERI-EQIVYILSEQD--------KRKKLMEVL------NRGVKKP 1002
+P ++IG+VG+ + I +Q Y + Q K KL +L NR
Sbjct: 381 MKPGYLFIGNVGEAVDNINQQFEYFGARQSSDEILDPKKLDKLFSILRFHKDENRNYS-- 438
Query: 1003 VIIFVNQKKGADVLAKGLEKLGYNACT-LHGGKGQEQRELALNSLKGGSKDILVATDVAG 1061
+IIF N KK + LA L + G++ T +HG K QE RE A++S + G IL+ATDVA
Sbjct: 439 IIIFANFKKACEELAYELSRKGFSDNTVIHGSKSQEARERAIDSFREGKDKILIATDVAA 498
Query: 1062 RGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDL 1115
RGIDI +VS+V+NY M K ++Y HRIGRTGRAG +G + +F DS +F DL
Sbjct: 499 RGIDIPNVSLVVNYQMTKKFDEYIHRIGRTGRAGNKGTSCTFIDDGDSEVFLDL 552
Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/556 (40%), Positives = 309/556 (55%), Gaps = 83/556 (14%)
Query: 1282 RKFVFDWDASEDTSVDYNSIYKERHQVQFFGRGNIAGIDIKAQKRDQSKFYGEMLEKRRT 1341
R F FDWD EDTS +Y + V++ R N + +
Sbjct: 82 RNFNFDWDEEEDTSNNYQPL------VRYDNRTNPPDLGLS------------------- 116
Query: 1342 EAEKEQEKVRLKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDP 1401
D HW+EK +D+MT RDWRIF+EDY+IT KGG + +P
Sbjct: 117 ------------------------DMHWSEKQIDDMTTRDWRIFKEDYNITSKGGDIENP 152
Query: 1402 VRNWKEASLPTEILEI-IEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLP 1460
+R W E+ LP ++L I I+ +GY PTPIQR +IP+ L RDI+G+AETGSGKTLAFLLP
Sbjct: 153 LRCWAESKLPAKLLNILIKNLGYDSPTPIQRASIPLALNGRDIVGIAETGSGKTLAFLLP 212
Query: 1461 LLVWIQSLPKIARMEDADQ-----GPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVV 1515
L +I S+ + + Q P +I+APTRELA QI +E FG L + V ++
Sbjct: 213 LFSYILSVDSNYLLYEHQQESNFNKPLGLILAPTRELALQITKEAKLFGDKLNLNVVTII 272
Query: 1516 GGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDV 1575
GG EE +R G IV+ATPGRLID LE + L+ C + +DEAD+MIDMGFE +
Sbjct: 273 GGHQYEETVHSVRNGVHIVVATPGRLIDSLERGIINLSNCYFFTMDEADKMIDMGFEKSL 332
Query: 1576 QKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRP 1635
Q IL Y+P + T D + +N KK R T+MFTAT+ P +E++ ++YL +P
Sbjct: 333 QSILNYLPASEKLETTIDGKI-------FNIKK--RITLMFTATISPPIEKITKNYLMKP 383
Query: 1636 ATVYIGSVGKPTERI-EQIVYILSEQD--------KRKKLMEVL------NRGVKKPVII 1680
++IG+VG+ + I +Q Y + Q K KL +L NR +II
Sbjct: 384 GYLFIGNVGEAVDNINQQFEYFGARQSSDEILDPKKLDKLFSILRFHKDENRNYS--III 441
Query: 1681 FVNQKKGADVLAKGLEKLGYNACT-LHGGKGQEQRELALNSLKGGSKDILVATDVAGRGI 1739
F N KK + LA L + G++ T +HG K QE RE A++S + G IL+ATDVA RGI
Sbjct: 442 FANFKKACEELAYELSRKGFSDNTVIHGSKSQEARERAIDSFREGKDKILIATDVAARGI 501
Query: 1740 DIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPV 1799
DI +VS+V+NY M K ++Y HRIGRTGRAG +G + +F DS +F DLK+ +
Sbjct: 502 DIPNVSLVVNYQMTKKFDEYIHRIGRTGRAGNKGTSCTFIDDGDSEVFLDLKKFLNKG-K 560
Query: 1800 STCPPELLNHPDAQHK 1815
CP LL H Q +
Sbjct: 561 KKCPEWLLKHSSTQSQ 576
Score = 225 bits (573), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/394 (36%), Positives = 200/394 (50%), Gaps = 79/394 (20%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMED 60
+I+ +GY PTPIQR +IP+ L RDI+G+AETGSGKTLAFLLPL +I S+ + +
Sbjct: 169 LIKNLGYDSPTPIQRASIPLALNGRDIVGIAETGSGKTLAFLLPLFSYILSVDSNYLLYE 228
Query: 61 ADQ-----GPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGC 115
Q P +I+APTRELA QI +E FG L + V ++GG EE +R G
Sbjct: 229 HQQESNFNKPLGLILAPTRELALQITKEAKLFGDKLNLNVVTIIGGHQYEETVHSVRNGV 288
Query: 116 EIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDT 175
IV+ATPGRLID LE + L+ C + +DEAD+MIDMGFE +Q IL Y+P + T
Sbjct: 289 HIVVATPGRLIDSLERGIINLSNCYFFTMDEADKMIDMGFEKSLQSILNYLPASEKLETT 348
Query: 176 EDAEDENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANY 235
D + +N KK R T+MFTAT+ P
Sbjct: 349 IDGKI-------FNIKK--RITLMFTATISP----------------------------- 370
Query: 236 NSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERI-EQIVYILSEQD-- 292
+E++ ++YL +P ++IG+VG+ + I +Q Y + Q
Sbjct: 371 ------------------PIEKITKNYLMKPGYLFIGNVGEAVDNINQQFEYFGARQSSD 412
Query: 293 ------KRKKLMEVL------NRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACT-LHGG 339
K KL +L NR +IIF N KK + LA L + G++ T +HG
Sbjct: 413 EILDPKKLDKLFSILRFHKDENRNYS--IIIFANFKKACEELAYELSRKGFSDNTVIHGS 470
Query: 340 KGQEQRELALNSLKGGSKDILMAGDRRSRSRSPP 373
K QE RE A++S + G IL+A D +R P
Sbjct: 471 KSQEARERAIDSFREGKDKILIATDVAARGIDIP 504
>sp|A5DF03|PRP28_PICGU Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PRP28 PE=3 SV=2
Length = 575
Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/468 (42%), Positives = 288/468 (61%), Gaps = 31/468 (6%)
Query: 1366 DRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAE 1425
+ HW++K L++MT RDWRIF+ED+SIT KG +P+P+R+WKE+ +PT +L I+++GY E
Sbjct: 113 EEHWSDKKLEDMTSRDWRIFKEDFSITCKGNNIPNPLRSWKESGIPTTLLNTIDQLGYKE 172
Query: 1426 PTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKI-----ARMEDADQG 1480
PTPIQR AIP L +RD++G+AETGSGKTLAFL+PLL ++ ++ K + E
Sbjct: 173 PTPIQRAAIPTALGHRDVVGIAETGSGKTLAFLIPLLSYLSAIDKDYMEVEHKQESNLNK 232
Query: 1481 PYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGR 1540
+++APTRELA QI +E KF + LG V ++GG EE ++ G IV+ATPGR
Sbjct: 233 VLGLVLAPTRELALQISKEAKKFASVLGYNVVTIIGGHQYEETVKSVQDGAHIVVATPGR 292
Query: 1541 LIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKL 1600
LID E + L+QC ++ +DEADRMIDMGFE +Q IL ++P T+
Sbjct: 293 LIDSAEKGLIDLSQCYHLTMDEADRMIDMGFEKALQSILSFLPSTS---------SSGFG 343
Query: 1601 LANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQ 1660
L + K K R T+MFTAT+ P +E++ + YL+ PA +YIG G+ + I Q L +
Sbjct: 344 LDSTIFKVKSRITLMFTATISPPIEKITKDYLQTPAYLYIGDAGEIVDNINQKFEYLGDN 403
Query: 1661 ---------DKRKKLMEVLNRGVKKP----VIIFVNQKKGADVLAKGL--EKLGYNACTL 1705
+ K++ L + +++ +IIF N K+ ++L+ L + +G N +
Sbjct: 404 VDSQEELNAPRTNKMISALRQHIRETEQPLIIIFANFKRTCELLSVELSNQNVGSN-IVI 462
Query: 1706 HGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGR 1765
HG K QE RE A+ S + ++L+ATDVA RGIDI +VS+V+NY M K ++Y HRIGR
Sbjct: 463 HGSKSQEARESAIASFREHKVNVLIATDVAARGIDIPNVSLVVNYHMPKRFDEYIHRIGR 522
Query: 1766 TGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVSTCPPELLNHPDAQ 1813
TGRAGK G ++SF DS + +LK + S P LL HP Q
Sbjct: 523 TGRAGKSGASLSFVDDGDSEILVNLKSFL-SKGTKRLPDWLLRHPAVQ 569
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/449 (42%), Positives = 281/449 (62%), Gaps = 30/449 (6%)
Query: 691 DRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAE 750
+ HW++K L++MT RDWRIF+ED+SIT KG +P+P+R+WKE+ +PT +L I+++GY E
Sbjct: 113 EEHWSDKKLEDMTSRDWRIFKEDFSITCKGNNIPNPLRSWKESGIPTTLLNTIDQLGYKE 172
Query: 751 PTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKI-----ARMEDADQG 805
PTPIQR AIP L +RD++G+AETGSGKTLAFL+PLL ++ ++ K + E
Sbjct: 173 PTPIQRAAIPTALGHRDVVGIAETGSGKTLAFLIPLLSYLSAIDKDYMEVEHKQESNLNK 232
Query: 806 PYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGR 865
+++APTRELA QI +E KF + LG V ++GG EE ++ G IV+ATPGR
Sbjct: 233 VLGLVLAPTRELALQISKEAKKFASVLGYNVVTIIGGHQYEETVKSVQDGAHIVVATPGR 292
Query: 866 LIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKL 925
LID E + L+QC ++ +DEADRMIDMGFE +Q IL ++P T+
Sbjct: 293 LIDSAEKGLIDLSQCYHLTMDEADRMIDMGFEKALQSILSFLPSTS---------SSGFG 343
Query: 926 LANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQ 985
L + K K R T+MFTAT+ P +E++ + YL+ PA +YIG G+ + I Q L +
Sbjct: 344 LDSTIFKVKSRITLMFTATISPPIEKITKDYLQTPAYLYIGDAGEIVDNINQKFEYLGDN 403
Query: 986 ---------DKRKKLMEVLNRGVKKP----VIIFVNQKKGADVLAKGL--EKLGYNACTL 1030
+ K++ L + +++ +IIF N K+ ++L+ L + +G N +
Sbjct: 404 VDSQEELNAPRTNKMISALRQHIRETEQPLIIIFANFKRTCELLSVELSNQNVGSN-IVI 462
Query: 1031 HGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGR 1090
HG K QE RE A+ S + ++L+ATDVA RGIDI +VS+V+NY M K ++Y HRIGR
Sbjct: 463 HGSKSQEARESAIASFREHKVNVLIATDVAARGIDIPNVSLVVNYHMPKRFDEYIHRIGR 522
Query: 1091 TGRAGKEGLAVSFCTKDDSHLFYDLKQMM 1119
TGRAGK G ++SF DS + +LK +
Sbjct: 523 TGRAGKSGASLSFVDDGDSEILVNLKSFL 551
Score = 210 bits (535), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 133/392 (33%), Positives = 198/392 (50%), Gaps = 77/392 (19%)
Query: 2 IEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKI-----A 56
I+++GY EPTPIQR AIP L +RD++G+AETGSGKTLAFL+PLL ++ ++ K
Sbjct: 165 IDQLGYKEPTPIQRAAIPTALGHRDVVGIAETGSGKTLAFLIPLLSYLSAIDKDYMEVEH 224
Query: 57 RMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCE 116
+ E +++APTRELA QI +E KF + LG V ++GG EE ++ G
Sbjct: 225 KQESNLNKVLGLVLAPTRELALQISKEAKKFASVLGYNVVTIIGGHQYEETVKSVQDGAH 284
Query: 117 IVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTE 176
IV+ATPGRLID E + L+QC ++ +DEADRMIDMGFE +Q IL ++P T+
Sbjct: 285 IVVATPGRLIDSAEKGLIDLSQCYHLTMDEADRMIDMGFEKALQSILSFLPSTS------ 338
Query: 177 DAEDENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYN 236
L + K K R T+MFTAT+ P
Sbjct: 339 ---SSGFGLDSTIFKVKSRITLMFTATISP------------------------------ 365
Query: 237 SKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQ----- 291
+E++ + YL+ PA +YIG G+ + I Q L +
Sbjct: 366 -----------------PIEKITKDYLQTPAYLYIGDAGEIVDNINQKFEYLGDNVDSQE 408
Query: 292 ----DKRKKLMEVLNRGVKKP----VIIFVNQKKGADVLAKGL--EKLGYNACTLHGGKG 341
+ K++ L + +++ +IIF N K+ ++L+ L + +G N +HG K
Sbjct: 409 ELNAPRTNKMISALRQHIRETEQPLIIIFANFKRTCELLSVELSNQNVGSN-IVIHGSKS 467
Query: 342 QEQRELALNSLKGGSKDILMAGDRRSRSRSPP 373
QE RE A+ S + ++L+A D +R P
Sbjct: 468 QEARESAIASFREHKVNVLIATDVAARGIDIP 499
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 44/135 (32%)
Query: 486 PLSLEELLAKKKAEEEARSKPKFLTKEERAAEALRKRQAEVEEMRKKMEEERKKRQEFTK 545
PL+ ELL K ++++ +KP+FL+K++R +E R K +EER+K +
Sbjct: 3 PLNAAELL-KSRSQDHKLAKPQFLSKKKR-----------LELQRAKEDEEREKTE---- 46
Query: 546 EASFESKRENFDARLRRDREKKKEDPEEKELNKDKEREGEAIKERYLGLVKKKRRVRRLN 605
R+ K+ P E E D++ A K+R KKR
Sbjct: 47 -------------LKRKTNTLKRSSPSEPETILDQKDTSTANKKR------KKR------ 81
Query: 606 DRKFVFDWDASEDTS 620
F F+WD EDTS
Sbjct: 82 ---FNFEWDDEEDTS 93
>sp|Q6CT49|PRP28_KLULA Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=PRP28 PE=3 SV=1
Length = 539
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/427 (47%), Positives = 273/427 (63%), Gaps = 36/427 (8%)
Query: 692 RHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASL-PTEILEIIEK-IGYA 749
+HW+EK +EM+ RDWRI ED++I+ KGG V P+RNW E L P ++L II + Y
Sbjct: 100 KHWSEKKYEEMSTRDWRILSEDFNISSKGGTVEKPLRNWHELKLIPEDLLNIITNDLHYN 159
Query: 750 EPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAI 809
EPT IQR IP + NRD IGVA TGSGKTLAFLLP+L+ + +P + + D GP A+
Sbjct: 160 EPTSIQRSTIPNVINNRDFIGVASTGSGKTLAFLLPILIKLHGIPPLNSITKHD-GPLAL 218
Query: 810 IMAPTRELAQQIEEE----TNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGR 865
++APTRELAQQI+ E T + P I V +VGG S EE LR GC+I++ATPGR
Sbjct: 219 VLAPTRELAQQIQHEGQSITKLWKRPCNI--VSIVGGHSLEEISANLRDGCDILVATPGR 276
Query: 866 LIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKL 925
L+D L++ L L Q +VLDEAD+MID GFE + IL + +
Sbjct: 277 LLDCLDSHLLFLKQVNTLVLDEADKMIDFGFEDQLTTILA----------------KTET 320
Query: 926 LANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSV-GKPTERIEQIV-YILS 983
++N RQT+MFTAT P +E++A YL++P+ V +G KP +I+QIV Y+
Sbjct: 321 ISN-------RQTMMFTATFSPTIEKVANGYLKKPSYVTVGGEESKP--KIKQIVRYVPD 371
Query: 984 EQDKRKKLMEVLNRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELAL 1043
E++K K L++ K P+IIF+N K+ AD L L + + A TLHG K QEQRE +L
Sbjct: 372 EEEKLKILVKDFLPNYKAPIIIFINYKRTADWLFDKLREARFRATTLHGSKSQEQREHSL 431
Query: 1044 NSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSF 1103
+ L+ G DIL+ATDVAGRGIDI +VS+V+N KS + + HR+GRTGRAGK G A++F
Sbjct: 432 SLLRNGKVDILIATDVAGRGIDIPNVSLVVNLQFPKSFDSFVHRVGRTGRAGKTGTALTF 491
Query: 1104 CTKDDSH 1110
T+++ H
Sbjct: 492 LTEEEDH 498
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/427 (47%), Positives = 273/427 (63%), Gaps = 36/427 (8%)
Query: 1367 RHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASL-PTEILEIIEK-IGYA 1424
+HW+EK +EM+ RDWRI ED++I+ KGG V P+RNW E L P ++L II + Y
Sbjct: 100 KHWSEKKYEEMSTRDWRILSEDFNISSKGGTVEKPLRNWHELKLIPEDLLNIITNDLHYN 159
Query: 1425 EPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAI 1484
EPT IQR IP + NRD IGVA TGSGKTLAFLLP+L+ + +P + + D GP A+
Sbjct: 160 EPTSIQRSTIPNVINNRDFIGVASTGSGKTLAFLLPILIKLHGIPPLNSITKHD-GPLAL 218
Query: 1485 IMAPTRELAQQIEEE----TNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGR 1540
++APTRELAQQI+ E T + P I V +VGG S EE LR GC+I++ATPGR
Sbjct: 219 VLAPTRELAQQIQHEGQSITKLWKRPCNI--VSIVGGHSLEEISANLRDGCDILVATPGR 276
Query: 1541 LIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKL 1600
L+D L++ L L Q +VLDEAD+MID GFE + IL + +
Sbjct: 277 LLDCLDSHLLFLKQVNTLVLDEADKMIDFGFEDQLTTILA----------------KTET 320
Query: 1601 LANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSV-GKPTERIEQIV-YILS 1658
++N RQT+MFTAT P +E++A YL++P+ V +G KP +I+QIV Y+
Sbjct: 321 ISN-------RQTMMFTATFSPTIEKVANGYLKKPSYVTVGGEESKP--KIKQIVRYVPD 371
Query: 1659 EQDKRKKLMEVLNRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELAL 1718
E++K K L++ K P+IIF+N K+ AD L L + + A TLHG K QEQRE +L
Sbjct: 372 EEEKLKILVKDFLPNYKAPIIIFINYKRTADWLFDKLREARFRATTLHGSKSQEQREHSL 431
Query: 1719 NSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSF 1778
+ L+ G DIL+ATDVAGRGIDI +VS+V+N KS + + HR+GRTGRAGK G A++F
Sbjct: 432 SLLRNGKVDILIATDVAGRGIDIPNVSLVVNLQFPKSFDSFVHRVGRTGRAGKTGTALTF 491
Query: 1779 CTKDDSH 1785
T+++ H
Sbjct: 492 LTEEEDH 498
Score = 226 bits (577), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/379 (38%), Positives = 197/379 (51%), Gaps = 81/379 (21%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMED 60
I + Y EPT IQR IP + NRD IGVA TGSGKTLAFLLP+L+ + +P + +
Sbjct: 152 ITNDLHYNEPTSIQRSTIPNVINNRDFIGVASTGSGKTLAFLLPILIKLHGIPPLNSITK 211
Query: 61 ADQGPYAIIMAPTRELAQQIEEE----TNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCE 116
D GP A+++APTRELAQQI+ E T + P I V +VGG S EE LR GC+
Sbjct: 212 HD-GPLALVLAPTRELAQQIQHEGQSITKLWKRPCNI--VSIVGGHSLEEISANLRDGCD 268
Query: 117 IVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTE 176
I++ATPGRL+D L++ L L Q +VLDEAD+MID GFE + IL
Sbjct: 269 ILVATPGRLLDCLDSHLLFLKQVNTLVLDEADKMIDFGFEDQLTTILA------------ 316
Query: 177 DAEDENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYN 236
+ + ++N RQT+MFTAT P
Sbjct: 317 ----KTETISN-------RQTMMFTATFSP------------------------------ 335
Query: 237 SKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGS-VGKPTERIEQIV-YILSEQDKR 294
+E++A YL++P+ V +G KP +I+QIV Y+ E++K
Sbjct: 336 -----------------TIEKVANGYLKKPSYVTVGGEESKP--KIKQIVRYVPDEEEKL 376
Query: 295 KKLMEVLNRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKG 354
K L++ K P+IIF+N K+ AD L L + + A TLHG K QEQRE +L+ L+
Sbjct: 377 KILVKDFLPNYKAPIIIFINYKRTADWLFDKLREARFRATTLHGSKSQEQREHSLSLLRN 436
Query: 355 GSKDILMAGDRRSRSRSPP 373
G DIL+A D R P
Sbjct: 437 GKVDILIATDVAGRGIDIP 455
>sp|Q59W52|PRP28_CANAL Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=PRP28 PE=3
SV=1
Length = 581
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/430 (43%), Positives = 275/430 (63%), Gaps = 19/430 (4%)
Query: 693 HWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPT 752
HWT K+L+EMT+RDWRIF+EDY+IT KG +P+P+R W E S+ +++ II ++GY EPT
Sbjct: 133 HWTNKNLEEMTDRDWRIFKEDYNITTKGKNIPNPLRYWNEGSINDKLVSIISQLGYEEPT 192
Query: 753 PIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPK-IARMEDADQGPYAIIM 811
+QR +IP+ L+ RD++GVAETGSGKTLAFL+P+L +I S+ + + E P +I+
Sbjct: 193 SVQRASIPLALKKRDVVGVAETGSGKTLAFLIPVLNYILSIDENYLKYEKISNEPVGLIL 252
Query: 812 APTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRL-RLGCEIVIATPGRLIDVL 870
APTRELA QI +E KF LG + + ++GG ++ ++ + G +++ATPGRL+D +
Sbjct: 253 APTRELALQITKEAEKFCKKLGYQVLPIIGGHHYQDTINKIDQTGVHLIVATPGRLVDSI 312
Query: 871 ENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYN 930
E + + L++C +V+DEADRMIDMGFE D+ K+L+ +P T D ++
Sbjct: 313 ERKIVDLSKCYCLVMDEADRMIDMGFEKDLNKVLDKLPTEKQLSSTIDGRI-------FH 365
Query: 931 SKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILS----EQD 986
+K R T+MFTAT+ P VE+L + YL P +YIG G+ + I Q LS E
Sbjct: 366 LEK--RSTMMFTATISPTVEKLTKKYLIDPGYLYIGGAGEALDNISQSFEFLSSATTEAT 423
Query: 987 KRKKLMEVLN---RGVKKP-VIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELA 1042
K KL++++ R + P +IIF N K D L++ L N +HG K Q+ RE A
Sbjct: 424 KFNKLIKIIRSHWRVTENPLIIIFANFKHVCDSLSQELSSNDINNVVIHGSKSQDMREQA 483
Query: 1043 LNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVS 1102
+ + + ++L+ATDVA RGIDI +V++VINY M K ++Y HRIGRTGRAG G + +
Sbjct: 484 ITNFRNHESEVLIATDVAARGIDIPNVTLVINYQMVKKFDEYIHRIGRTGRAGNLGESFT 543
Query: 1103 FCTKDDSHLF 1112
F + D+ +F
Sbjct: 544 FISDQDTEIF 553
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/430 (43%), Positives = 275/430 (63%), Gaps = 19/430 (4%)
Query: 1368 HWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPT 1427
HWT K+L+EMT+RDWRIF+EDY+IT KG +P+P+R W E S+ +++ II ++GY EPT
Sbjct: 133 HWTNKNLEEMTDRDWRIFKEDYNITTKGKNIPNPLRYWNEGSINDKLVSIISQLGYEEPT 192
Query: 1428 PIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPK-IARMEDADQGPYAIIM 1486
+QR +IP+ L+ RD++GVAETGSGKTLAFL+P+L +I S+ + + E P +I+
Sbjct: 193 SVQRASIPLALKKRDVVGVAETGSGKTLAFLIPVLNYILSIDENYLKYEKISNEPVGLIL 252
Query: 1487 APTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRL-RLGCEIVIATPGRLIDVL 1545
APTRELA QI +E KF LG + + ++GG ++ ++ + G +++ATPGRL+D +
Sbjct: 253 APTRELALQITKEAEKFCKKLGYQVLPIIGGHHYQDTINKIDQTGVHLIVATPGRLVDSI 312
Query: 1546 ENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYN 1605
E + + L++C +V+DEADRMIDMGFE D+ K+L+ +P T D ++
Sbjct: 313 ERKIVDLSKCYCLVMDEADRMIDMGFEKDLNKVLDKLPTEKQLSSTIDGRI-------FH 365
Query: 1606 SKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILS----EQD 1661
+K R T+MFTAT+ P VE+L + YL P +YIG G+ + I Q LS E
Sbjct: 366 LEK--RSTMMFTATISPTVEKLTKKYLIDPGYLYIGGAGEALDNISQSFEFLSSATTEAT 423
Query: 1662 KRKKLMEVLN---RGVKKP-VIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELA 1717
K KL++++ R + P +IIF N K D L++ L N +HG K Q+ RE A
Sbjct: 424 KFNKLIKIIRSHWRVTENPLIIIFANFKHVCDSLSQELSSNDINNVVIHGSKSQDMREQA 483
Query: 1718 LNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVS 1777
+ + + ++L+ATDVA RGIDI +V++VINY M K ++Y HRIGRTGRAG G + +
Sbjct: 484 ITNFRNHESEVLIATDVAARGIDIPNVTLVINYQMVKKFDEYIHRIGRTGRAGNLGESFT 543
Query: 1778 FCTKDDSHLF 1787
F + D+ +F
Sbjct: 544 FISDQDTEIF 553
Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 131/384 (34%), Positives = 199/384 (51%), Gaps = 66/384 (17%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPK-IARME 59
II ++GY EPT +QR +IP+ L+ RD++GVAETGSGKTLAFL+P+L +I S+ + + E
Sbjct: 182 IISQLGYEEPTSVQRASIPLALKKRDVVGVAETGSGKTLAFLIPVLNYILSIDENYLKYE 241
Query: 60 DADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRL-RLGCEIV 118
P +I+APTRELA QI +E KF LG + + ++GG ++ ++ + G ++
Sbjct: 242 KISNEPVGLILAPTRELALQITKEAEKFCKKLGYQVLPIIGGHHYQDTINKIDQTGVHLI 301
Query: 119 IATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDA 178
+ATPGRL+D +E + + L++C +V+DEADRMIDMGFE D+ K+L+ +P T D
Sbjct: 302 VATPGRLVDSIERKIVDLSKCYCLVMDEADRMIDMGFEKDLNKVLDKLPTEKQLSSTIDG 361
Query: 179 EDENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSK 238
++ +K R T+MFTAT+ P
Sbjct: 362 RI-------FHLEK--RSTMMFTATISP-------------------------------- 380
Query: 239 KKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILS----EQDKR 294
VE+L + YL P +YIG G+ + I Q LS E K
Sbjct: 381 ---------------TVEKLTKKYLIDPGYLYIGGAGEALDNISQSFEFLSSATTEATKF 425
Query: 295 KKLMEVLN---RGVKKP-VIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALN 350
KL++++ R + P +IIF N K D L++ L N +HG K Q+ RE A+
Sbjct: 426 NKLIKIIRSHWRVTENPLIIIFANFKHVCDSLSQELSSNDINNVVIHGSKSQDMREQAIT 485
Query: 351 SLKGGSKDILMAGDRRSRSRSPPR 374
+ + ++L+A D +R P
Sbjct: 486 NFRNHESEVLIATDVAARGIDIPN 509
>sp|P23394|PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=PRP28 PE=1
SV=2
Length = 588
Score = 363 bits (933), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 243/652 (37%), Positives = 344/652 (52%), Gaps = 124/652 (19%)
Query: 486 PLSLEELLA---KKKAEEEARS----KPKFLTKEERAAEALRKRQAEVEEMRKKMEEERK 538
P+ + +L+A KKK +E S KP+FL K+ER+ + E K+ EE
Sbjct: 4 PIDVSQLIAGINKKKGLDENTSGKISKPRFLNKQERSKQ----------ERLKENEESLT 53
Query: 539 KRQEFTKEASFESKRENFDARLRRDREKKKEDPEEKELNKDKEREGEAIKERYLGLVKKK 598
Q + A E K+ N ++D E N KK
Sbjct: 54 PTQ--SDSAKVEIKKVN-----------SRDDSFFNETND------------------KK 82
Query: 599 RRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFGRGNIAGIDIKAQKRDQSKFYG 658
R + N KF F W+ SEDT Y+ I R + +G
Sbjct: 83 RNPSKQNGSKFHFSWNESEDTLSGYDPIVSTR-AIDLLWKG------------------- 122
Query: 659 EMLEKRRTEAEKEQEKVRLKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITI 718
K K + + +HWTEKSL EM ERDWRI +EDY+I
Sbjct: 123 --------------------KTPKNAAESSYMGKHWTEKSLHEMNERDWRILKEDYAIVT 162
Query: 719 KGGKVPDPVRNWKEASL-PTEILE-IIEKIGYAEPTPIQRQAIPIGL---QNRDIIGVAE 773
KGG V +P+RNW+E ++ P ++L II+++ + PTPIQR IP Q RD +GVA
Sbjct: 163 KGGTVENPLRNWEELNIIPRDLLRVIIQELRFPSPTPIQRITIPNVCNMKQYRDFLGVAS 222
Query: 774 TGSGKTLAFLLPLLVWI-QSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFG--- 829
TGSGKTLAF++P+L+ + +S P+ ++ D GP A+I+APTREL QQI++ET K
Sbjct: 223 TGSGKTLAFVIPILIKMSRSPPRPPSLKIID-GPKALILAPTRELVQQIQKETQKVTKIW 281
Query: 830 ---TPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLD 886
+ + + +VGG S EE F L GC+I++ATPGRLID LEN LV+ Q +VLD
Sbjct: 282 SKESNYDCKVISIVGGHSLEEISFSLSEGCDILVATPGRLIDSLENHLLVMKQVETLVLD 341
Query: 887 EADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMP 946
EAD+MID+GFE V IL T + + + A + RQT+MFTATM
Sbjct: 342 EADKMIDLGFEDQVTNIL-----TKVDINADSAVN--------------RQTLMFTATMT 382
Query: 947 PAVERLARSYLRRPATVYIGSVGKPTERIEQIV-YILSEQDKRKKLMEVLNRGVKKPVII 1005
P +E++A Y+++P IG I+Q+V Y +++DK KKL ++ + P+II
Sbjct: 383 PVIEKIAAGYMQKPVYATIGVETGSEPLIQQVVEYADNDEDKFKKLKPIVAK-YDPPIII 441
Query: 1006 FVNQKKGADVLAKGLEK-LGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGI 1064
F+N K+ AD LA+ +K LHG K QEQRE +L + I++AT+VA RG+
Sbjct: 442 FINYKQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLFRTNKVQIMIATNVAARGL 501
Query: 1065 DIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCT-KDDSHLFYDL 1115
DI +VS+V+N+ ++K ++DY HRIGRTGRA EG AVSF + +D L +L
Sbjct: 502 DIPNVSLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSFVSAAEDESLIREL 553
Score = 363 bits (931), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 216/534 (40%), Positives = 303/534 (56%), Gaps = 76/534 (14%)
Query: 1272 KKRRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFGRGNIAGIDIKAQKRDQSKF 1331
KKR + N KF F W+ SEDT Y+ I R + +G
Sbjct: 81 KKRNPSKQNGSKFHFSWNESEDTLSGYDPIVSTR-AIDLLWKG----------------- 122
Query: 1332 YGEMLEKRRTEAEKEQEKVRLKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSI 1391
K K + + +HWTEKSL EM ERDWRI +EDY+I
Sbjct: 123 ----------------------KTPKNAAESSYMGKHWTEKSLHEMNERDWRILKEDYAI 160
Query: 1392 TIKGGKVPDPVRNWKEASL-PTEILE-IIEKIGYAEPTPIQRQAIPIGL---QNRDIIGV 1446
KGG V +P+RNW+E ++ P ++L II+++ + PTPIQR IP Q RD +GV
Sbjct: 161 VTKGGTVENPLRNWEELNIIPRDLLRVIIQELRFPSPTPIQRITIPNVCNMKQYRDFLGV 220
Query: 1447 AETGSGKTLAFLLPLLVWI-QSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFG- 1504
A TGSGKTLAF++P+L+ + +S P+ ++ D GP A+I+APTREL QQI++ET K
Sbjct: 221 ASTGSGKTLAFVIPILIKMSRSPPRPPSLKIID-GPKALILAPTRELVQQIQKETQKVTK 279
Query: 1505 -----TPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIV 1559
+ + + +VGG S EE F L GC+I++ATPGRLID LEN LV+ Q +V
Sbjct: 280 IWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILVATPGRLIDSLENHLLVMKQVETLV 339
Query: 1560 LDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTAT 1619
LDEAD+MID+GFE V IL T + + + A + RQT+MFTAT
Sbjct: 340 LDEADKMIDLGFEDQVTNIL-----TKVDINADSAVN--------------RQTLMFTAT 380
Query: 1620 MPPAVERLARSYLRRPATVYIGSVGKPTERIEQIV-YILSEQDKRKKLMEVLNRGVKKPV 1678
M P +E++A Y+++P IG I+Q+V Y +++DK KKL ++ + P+
Sbjct: 381 MTPVIEKIAAGYMQKPVYATIGVETGSEPLIQQVVEYADNDEDKFKKLKPIVAK-YDPPI 439
Query: 1679 IIFVNQKKGADVLAKGLEK-LGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGR 1737
IIF+N K+ AD LA+ +K LHG K QEQRE +L + I++AT+VA R
Sbjct: 440 IIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLFRTNKVQIMIATNVAAR 499
Query: 1738 GIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCT-KDDSHLFYDL 1790
G+DI +VS+V+N+ ++K ++DY HRIGRTGRA EG AVSF + +D L +L
Sbjct: 500 GLDIPNVSLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSFVSAAEDESLIREL 553
Score = 204 bits (519), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 197/385 (51%), Gaps = 80/385 (20%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGL---QNRDIIGVAETGSGKTLAFLLPLLVWI-QSLPKIA 56
II+++ + PTPIQR IP Q RD +GVA TGSGKTLAF++P+L+ + +S P+
Sbjct: 188 IIQELRFPSPTPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPP 247
Query: 57 RMEDADQGPYAIIMAPTRELAQQIEEETNKFG------TPLGIRTVLVVGGLSREEQGFR 110
++ D GP A+I+APTREL QQI++ET K + + + +VGG S EE F
Sbjct: 248 SLKIID-GPKALILAPTRELVQQIQKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFS 306
Query: 111 LRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTN 170
L GC+I++ATPGRLID LEN LV+ Q +VLDEAD+MID+GFE V IL T
Sbjct: 307 LSEGCDILVATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNIL-----TK 361
Query: 171 LKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENK 230
+ + + A + RQT+MFTATM P
Sbjct: 362 VDINADSAVN--------------RQTLMFTATMTP------------------------ 383
Query: 231 LLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIV-YILS 289
+E++A Y+++P IG I+Q+V Y +
Sbjct: 384 -----------------------VIEKIAAGYMQKPVYATIGVETGSEPLIQQVVEYADN 420
Query: 290 EQDKRKKLMEVLNRGVKKPVIIFVNQKKGADVLAKGLEK-LGYNACTLHGGKGQEQRELA 348
++DK KKL ++ + P+IIF+N K+ AD LA+ +K LHG K QEQRE +
Sbjct: 421 DEDKFKKLKPIVAK-YDPPIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQREHS 479
Query: 349 LNSLKGGSKDILMAGDRRSRSRSPP 373
L + I++A + +R P
Sbjct: 480 LQLFRTNKVQIMIATNVAARGLDIP 504
>sp|A5DU73|PRP28_LODEL Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Lodderomyces
elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 /
NBRC 1676 / NRRL YB-4239) GN=PRP28 PE=3 SV=1
Length = 597
Score = 361 bits (927), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 201/451 (44%), Positives = 271/451 (60%), Gaps = 31/451 (6%)
Query: 690 DDR---HWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKI 746
DDR HW+ K L EMT+RDWRIF EDY IT KG K+P R+W E+ L +IL ++
Sbjct: 144 DDRNSGHWSTKLLSEMTDRDWRIFNEDYGITTKGKKIPHATRSWDESGLDPKILASLKSF 203
Query: 747 GYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLP-KIARMEDADQG 805
G+ +PTP+QR +IPI L+ RD++GVAETGSGKTLAFLLPLL ++ + E
Sbjct: 204 GFRQPTPVQRASIPISLELRDVVGVAETGSGKTLAFLLPLLHYLSRVDGNYLNYEKVRNE 263
Query: 806 PYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQ-----GFRLRLGCEIVI 860
P A+++APTRELA QI +E KFG LG + ++GG +E + G IV+
Sbjct: 264 PLALVLAPTRELALQITQEAEKFGKQLGFNVLSIIGGRQYQETMDQIDNMIVGRGVHIVV 323
Query: 861 ATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAE 920
TPGRL+D +E + L ++C Y+V+DEADRMIDMGFE D+ K++ NL P E
Sbjct: 324 GTPGRLLDSVERKILNFSKCYYLVMDEADRMIDMGFEKDLNKLI------NLLPKNE--- 374
Query: 921 DENKLLANYNSKKKY---RQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQ 977
KL + K + R T+M+TAT+ P +E++ +SYL PA +YIG G+ + I+Q
Sbjct: 375 ---KLSTTIDGKLFHLTKRLTMMYTATISPPIEKITKSYLIDPAYIYIGGAGEALDNIDQ 431
Query: 978 IVYILS---EQDKRKKLMEVLN----RGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTL 1030
LS E + KL++V+ R VIIF N K DVL+ LE+ +
Sbjct: 432 HFDYLSTYAESARLSKLIKVVQGHKRRNRNALVIIFANFKHVCDVLSLELEQNNLLNVVI 491
Query: 1031 HGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGR 1090
HG K QE RE AL + ILVATDVA RGID+ +VS+VINY M+K ++Y HRIGR
Sbjct: 492 HGSKSQEAREEALEDFRTHQAPILVATDVAARGIDVPNVSLVINYQMSKKFDEYIHRIGR 551
Query: 1091 TGRAGKEGLAVSFCTKDDSHLFYDLKQMMIS 1121
TGRAG G + +F D+ F LK+ + S
Sbjct: 552 TGRAGNLGESYTFLDDADAETFMPLKKFLKS 582
Score = 361 bits (927), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 201/451 (44%), Positives = 271/451 (60%), Gaps = 31/451 (6%)
Query: 1365 DDR---HWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKI 1421
DDR HW+ K L EMT+RDWRIF EDY IT KG K+P R+W E+ L +IL ++
Sbjct: 144 DDRNSGHWSTKLLSEMTDRDWRIFNEDYGITTKGKKIPHATRSWDESGLDPKILASLKSF 203
Query: 1422 GYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLP-KIARMEDADQG 1480
G+ +PTP+QR +IPI L+ RD++GVAETGSGKTLAFLLPLL ++ + E
Sbjct: 204 GFRQPTPVQRASIPISLELRDVVGVAETGSGKTLAFLLPLLHYLSRVDGNYLNYEKVRNE 263
Query: 1481 PYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQ-----GFRLRLGCEIVI 1535
P A+++APTRELA QI +E KFG LG + ++GG +E + G IV+
Sbjct: 264 PLALVLAPTRELALQITQEAEKFGKQLGFNVLSIIGGRQYQETMDQIDNMIVGRGVHIVV 323
Query: 1536 ATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAE 1595
TPGRL+D +E + L ++C Y+V+DEADRMIDMGFE D+ K++ NL P E
Sbjct: 324 GTPGRLLDSVERKILNFSKCYYLVMDEADRMIDMGFEKDLNKLI------NLLPKNE--- 374
Query: 1596 DENKLLANYNSKKKY---RQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQ 1652
KL + K + R T+M+TAT+ P +E++ +SYL PA +YIG G+ + I+Q
Sbjct: 375 ---KLSTTIDGKLFHLTKRLTMMYTATISPPIEKITKSYLIDPAYIYIGGAGEALDNIDQ 431
Query: 1653 IVYILS---EQDKRKKLMEVLN----RGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTL 1705
LS E + KL++V+ R VIIF N K DVL+ LE+ +
Sbjct: 432 HFDYLSTYAESARLSKLIKVVQGHKRRNRNALVIIFANFKHVCDVLSLELEQNNLLNVVI 491
Query: 1706 HGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGR 1765
HG K QE RE AL + ILVATDVA RGID+ +VS+VINY M+K ++Y HRIGR
Sbjct: 492 HGSKSQEAREEALEDFRTHQAPILVATDVAARGIDVPNVSLVINYQMSKKFDEYIHRIGR 551
Query: 1766 TGRAGKEGLAVSFCTKDDSHLFYDLKQMMIS 1796
TGRAG G + +F D+ F LK+ + S
Sbjct: 552 TGRAGNLGESYTFLDDADAETFMPLKKFLKS 582
Score = 208 bits (529), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 193/388 (49%), Gaps = 75/388 (19%)
Query: 2 IEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLP-KIARMED 60
++ G+ +PTP+QR +IPI L+ RD++GVAETGSGKTLAFLLPLL ++ + E
Sbjct: 200 LKSFGFRQPTPVQRASIPISLELRDVVGVAETGSGKTLAFLLPLLHYLSRVDGNYLNYEK 259
Query: 61 ADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQ-----GFRLRLGC 115
P A+++APTRELA QI +E KFG LG + ++GG +E + G
Sbjct: 260 VRNEPLALVLAPTRELALQITQEAEKFGKQLGFNVLSIIGGRQYQETMDQIDNMIVGRGV 319
Query: 116 EIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDT 175
IV+ TPGRL+D +E + L ++C Y+V+DEADRMIDMGFE D+ K++ NL P
Sbjct: 320 HIVVGTPGRLLDSVERKILNFSKCYYLVMDEADRMIDMGFEKDLNKLI------NLLPKN 373
Query: 176 EDAEDENKLLANYNSKKKY---RQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLL 232
E KL + K + R T+M+TAT+ P
Sbjct: 374 E------KLSTTIDGKLFHLTKRLTMMYTATISP-------------------------- 401
Query: 233 ANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILS--- 289
+E++ +SYL PA +YIG G+ + I+Q LS
Sbjct: 402 ---------------------PIEKITKSYLIDPAYIYIGGAGEALDNIDQHFDYLSTYA 440
Query: 290 EQDKRKKLMEVLN----RGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQR 345
E + KL++V+ R VIIF N K DVL+ LE+ +HG K QE R
Sbjct: 441 ESARLSKLIKVVQGHKRRNRNALVIIFANFKHVCDVLSLELEQNNLLNVVIHGSKSQEAR 500
Query: 346 ELALNSLKGGSKDILMAGDRRSRSRSPP 373
E AL + IL+A D +R P
Sbjct: 501 EEALEDFRTHQAPILVATDVAARGIDVP 528
>sp|Q8W4R3|RH30_ARATH DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana
GN=RH30 PE=2 SV=2
Length = 591
Score = 353 bits (907), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 186/426 (43%), Positives = 271/426 (63%), Gaps = 35/426 (8%)
Query: 698 SLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQ 757
++ MTE+D ++R + I+++G VP P++ +++A+ P ILE I K+G+ EPTPIQ Q
Sbjct: 135 TVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQ 194
Query: 758 AIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTREL 817
P+ L+ RD+IG+AETGSGKTLA+LLP LV + + P++ + D GP +I+APTREL
Sbjct: 195 GWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQ----DDGPIVLILAPTREL 250
Query: 818 AQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVL 877
A QI+EE+ KFG G+R+ + GG + Q LR G EIVIATPGRLID+LE ++ L
Sbjct: 251 AVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNL 310
Query: 878 NQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQ 937
+ TY+VLDEADRM+DMGFEP ++KI V+ ++PD RQ
Sbjct: 311 KRVTYLVLDEADRMLDMGFEPQIRKI-----VSQIRPD--------------------RQ 345
Query: 938 TVMFTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLN 996
T++++AT P VE LAR +LR P IGS K + I Q++ I+ +K +L+ +L
Sbjct: 346 TLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLK 405
Query: 997 R---GVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDI 1053
+ G K ++IFV K+G D + + L G+ A +HG K Q +R+ L K G I
Sbjct: 406 QLMDGSK--ILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPI 463
Query: 1054 LVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFY 1113
+ ATDVA RG+D+KD+ V+NYD ++EDY HRIGRTGRAG +G+A +F T D++
Sbjct: 464 MTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFAR 523
Query: 1114 DLKQMM 1119
+L +++
Sbjct: 524 ELVKIL 529
Score = 353 bits (907), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 186/426 (43%), Positives = 271/426 (63%), Gaps = 35/426 (8%)
Query: 1373 SLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQ 1432
++ MTE+D ++R + I+++G VP P++ +++A+ P ILE I K+G+ EPTPIQ Q
Sbjct: 135 TVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQ 194
Query: 1433 AIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTREL 1492
P+ L+ RD+IG+AETGSGKTLA+LLP LV + + P++ + D GP +I+APTREL
Sbjct: 195 GWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQ----DDGPIVLILAPTREL 250
Query: 1493 AQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVL 1552
A QI+EE+ KFG G+R+ + GG + Q LR G EIVIATPGRLID+LE ++ L
Sbjct: 251 AVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNL 310
Query: 1553 NQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQ 1612
+ TY+VLDEADRM+DMGFEP ++KI V+ ++PD RQ
Sbjct: 311 KRVTYLVLDEADRMLDMGFEPQIRKI-----VSQIRPD--------------------RQ 345
Query: 1613 TVMFTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLN 1671
T++++AT P VE LAR +LR P IGS K + I Q++ I+ +K +L+ +L
Sbjct: 346 TLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLK 405
Query: 1672 R---GVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDI 1728
+ G K ++IFV K+G D + + L G+ A +HG K Q +R+ L K G I
Sbjct: 406 QLMDGSK--ILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPI 463
Query: 1729 LVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFY 1788
+ ATDVA RG+D+KD+ V+NYD ++EDY HRIGRTGRAG +G+A +F T D++
Sbjct: 464 MTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFAR 523
Query: 1789 DLKQMM 1794
+L +++
Sbjct: 524 ELVKIL 529
Score = 227 bits (578), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 142/371 (38%), Positives = 199/371 (53%), Gaps = 82/371 (22%)
Query: 2 IEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDA 61
I K+G+ EPTPIQ Q P+ L+ RD+IG+AETGSGKTLA+LLP LV + + P++ +
Sbjct: 180 IAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQ---- 235
Query: 62 DQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIAT 121
D GP +I+APTRELA QI+EE+ KFG G+R+ + GG + Q LR G EIVIAT
Sbjct: 236 DDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIAT 295
Query: 122 PGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDE 181
PGRLID+LE ++ L + TY+VLDEADRM+DMGFEP ++KI V+ ++PD
Sbjct: 296 PGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKI-----VSQIRPD------- 343
Query: 182 NKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKY 241
RQT++++AT P
Sbjct: 344 -------------RQTLLWSATWP------------------------------------ 354
Query: 242 RQTVMFTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEV 300
R+ VE LAR +LR P IGS K + I Q++ I+ +K +L+ +
Sbjct: 355 RE-----------VETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTL 403
Query: 301 LNR---GVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSK 357
L + G K ++IFV K+G D + + L G+ A +HG K Q +R+ L K G
Sbjct: 404 LKQLMDGSK--ILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRS 461
Query: 358 DILMAGDRRSR 368
I+ A D +R
Sbjct: 462 PIMTATDVAAR 472
>sp|Q6FM43|PRP28_CANGA Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Candida
glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
0622 / NRRL Y-65) GN=PRP28 PE=3 SV=1
Length = 582
Score = 344 bits (882), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 192/453 (42%), Positives = 279/453 (61%), Gaps = 48/453 (10%)
Query: 675 VRLKKVKKREEK-----QKWDDRHWTEKSLDEMTERDWRIFREDYSITIKG-GKVPDPVR 728
V L++++++E++ ++ + W EK L EM ERDWRI RE+++IT KG G V P+R
Sbjct: 110 VILERIRQQEDQGDDLEAQYLGKSWREKLLVEMDERDWRIMREEFNITSKGKGAVKHPLR 169
Query: 729 NWKEAS-LPTEIL-EIIEKIGYAEPTPIQRQAIPIGLQN-----RDIIGVAETGSGKTLA 781
NW E + +PT+++ + E +G+ EPT IQR IP + + RDI+G+A TGSGKTLA
Sbjct: 170 NWSETNVIPTDLVRALTEGMGFDEPTAIQRITIPNAISSNKSVPRDILGIASTGSGKTLA 229
Query: 782 FLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPL----GIRTV 837
F +P+L + +LP GP A+++ PTRELAQQI +E N+ + + V
Sbjct: 230 FSIPILARLDALPARPVNLKTLDGPLALVLVPTRELAQQISQEINRLLSAWENKKNLNAV 289
Query: 838 LVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFE 897
+VGG S + LR GC+I+IATPGRL+DVL+N +VLN+ +VLDEADRMID+GFE
Sbjct: 290 SIVGGHSMSDISHTLRNGCDILIATPGRLLDVLDNHLVVLNKIQSLVLDEADRMIDLGFE 349
Query: 898 PDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYL 957
++ IL ++ L RQT++FTAT+ +VE +A+ YL
Sbjct: 350 DQMKSILSHLMADELAA---------------------RQTMLFTATLSSSVESIAKGYL 388
Query: 958 RRPATVYIGS---VGKPTERIEQIVYILSEQDKRKKLM--EVLNRGVKKPVIIFVNQKKG 1012
+ P V +GS KP I Q+V + DK+ + +++ G+ P IIF+N K+
Sbjct: 389 KNPLHVSVGSRWDSDKPL--ITQVVRHTGDDDKKLSFLKDDLIKNGL--PAIIFINYKET 444
Query: 1013 ADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMV 1072
AD L L +N TLHG K Q QRE A+ LK G+ ++L+AT+VA RG+DI DV++V
Sbjct: 445 ADWLTLRLSD-RFNIVTLHGSKSQSQRESAIQKLKSGTANVLIATNVAARGLDIPDVALV 503
Query: 1073 INYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCT 1105
+N+ M+K +DY HRIGRTGRAGK G+AV++ T
Sbjct: 504 VNFQMSKKFDDYIHRIGRTGRAGKTGIAVTYLT 536
Score = 344 bits (882), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 192/453 (42%), Positives = 279/453 (61%), Gaps = 48/453 (10%)
Query: 1350 VRLKKVKKREEK-----QKWDDRHWTEKSLDEMTERDWRIFREDYSITIKG-GKVPDPVR 1403
V L++++++E++ ++ + W EK L EM ERDWRI RE+++IT KG G V P+R
Sbjct: 110 VILERIRQQEDQGDDLEAQYLGKSWREKLLVEMDERDWRIMREEFNITSKGKGAVKHPLR 169
Query: 1404 NWKEAS-LPTEIL-EIIEKIGYAEPTPIQRQAIPIGLQN-----RDIIGVAETGSGKTLA 1456
NW E + +PT+++ + E +G+ EPT IQR IP + + RDI+G+A TGSGKTLA
Sbjct: 170 NWSETNVIPTDLVRALTEGMGFDEPTAIQRITIPNAISSNKSVPRDILGIASTGSGKTLA 229
Query: 1457 FLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPL----GIRTV 1512
F +P+L + +LP GP A+++ PTRELAQQI +E N+ + + V
Sbjct: 230 FSIPILARLDALPARPVNLKTLDGPLALVLVPTRELAQQISQEINRLLSAWENKKNLNAV 289
Query: 1513 LVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFE 1572
+VGG S + LR GC+I+IATPGRL+DVL+N +VLN+ +VLDEADRMID+GFE
Sbjct: 290 SIVGGHSMSDISHTLRNGCDILIATPGRLLDVLDNHLVVLNKIQSLVLDEADRMIDLGFE 349
Query: 1573 PDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYL 1632
++ IL ++ L RQT++FTAT+ +VE +A+ YL
Sbjct: 350 DQMKSILSHLMADELAA---------------------RQTMLFTATLSSSVESIAKGYL 388
Query: 1633 RRPATVYIGS---VGKPTERIEQIVYILSEQDKRKKLM--EVLNRGVKKPVIIFVNQKKG 1687
+ P V +GS KP I Q+V + DK+ + +++ G+ P IIF+N K+
Sbjct: 389 KNPLHVSVGSRWDSDKPL--ITQVVRHTGDDDKKLSFLKDDLIKNGL--PAIIFINYKET 444
Query: 1688 ADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMV 1747
AD L L +N TLHG K Q QRE A+ LK G+ ++L+AT+VA RG+DI DV++V
Sbjct: 445 ADWLTLRLSD-RFNIVTLHGSKSQSQRESAIQKLKSGTANVLIATNVAARGLDIPDVALV 503
Query: 1748 INYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCT 1780
+N+ M+K +DY HRIGRTGRAGK G+AV++ T
Sbjct: 504 VNFQMSKKFDDYIHRIGRTGRAGKTGIAVTYLT 536
Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 134/387 (34%), Positives = 192/387 (49%), Gaps = 87/387 (22%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQN-----RDIIGVAETGSGKTLAFLLPLLVWIQSLPKI 55
+ E +G+ EPT IQR IP + + RDI+G+A TGSGKTLAF +P+L + +LP
Sbjct: 185 LTEGMGFDEPTAIQRITIPNAISSNKSVPRDILGIASTGSGKTLAFSIPILARLDALPAR 244
Query: 56 ARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPL----GIRTVLVVGGLSREEQGFRL 111
GP A+++ PTRELAQQI +E N+ + + V +VGG S + L
Sbjct: 245 PVNLKTLDGPLALVLVPTRELAQQISQEINRLLSAWENKKNLNAVSIVGGHSMSDISHTL 304
Query: 112 RLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNL 171
R GC+I+IATPGRL+DVL+N +VLN+ +VLDEADRMID+GFE ++ IL ++ L
Sbjct: 305 RNGCDILIATPGRLLDVLDNHLVVLNKIQSLVLDEADRMIDLGFEDQMKSILSHLMADEL 364
Query: 172 KPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKL 231
RQT++FTAT
Sbjct: 365 AA---------------------RQTMLFTAT---------------------------- 375
Query: 232 LANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGS---VGKPTERIEQIVYIL 288
+ +VE +A+ YL+ P V +GS KP I Q+V
Sbjct: 376 -------------------LSSSVESIAKGYLKNPLHVSVGSRWDSDKPL--ITQVVRHT 414
Query: 289 SEQDKRKKLM--EVLNRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRE 346
+ DK+ + +++ G+ P IIF+N K+ AD L L +N TLHG K Q QRE
Sbjct: 415 GDDDKKLSFLKDDLIKNGL--PAIIFINYKETADWLTLRLSD-RFNIVTLHGSKSQSQRE 471
Query: 347 LALNSLKGGSKDILMAGDRRSRSRSPP 373
A+ LK G+ ++L+A + +R P
Sbjct: 472 SAIQKLKSGTANVLIATNVAARGLDIP 498
>sp|Q5QMN3|RH20_ORYSJ DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp.
japonica GN=Os01g0197200 PE=3 SV=2
Length = 494
Score = 338 bits (868), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 190/438 (43%), Positives = 264/438 (60%), Gaps = 32/438 (7%)
Query: 1373 SLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQ 1432
S+ MTE + +R IT++G VP PVR +++ P +L+ I K G+ EPTPIQ Q
Sbjct: 61 SVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQ 120
Query: 1433 AIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTREL 1492
P+ L+ RD+IG+AETGSGKTLA+LLP +V + + P +A GP +++APTREL
Sbjct: 121 GWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILA----PGDGPIVLVLAPTREL 176
Query: 1493 AQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVL 1552
A QI++E KFG I++ + GG+ + Q L+ G EIVIATPGRLID++E+ + L
Sbjct: 177 AVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIESHHTNL 236
Query: 1553 NQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQ 1612
+ TY+VLDEADRM+DMGFEP ++KI V+ ++PD RQ
Sbjct: 237 RRVTYLVLDEADRMLDMGFEPQIKKI-----VSQIRPD--------------------RQ 271
Query: 1613 TVMFTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLN 1671
T+ ++AT P VE+LAR++L P V IGS K I Q V ILSE K KL+ +L
Sbjct: 272 TLYWSATWPKEVEQLARNFLFDPYKVIIGSEELKANHAISQHVEILSESQKYNKLVNLLE 331
Query: 1672 RGVKKP-VIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILV 1730
+ ++IF++ KKG D + + L G+ A ++HG K Q +R+ L+ K G I+
Sbjct: 332 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMT 391
Query: 1731 ATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDL 1790
ATDVA RG+D+KDV VINYD S+EDY HRIGRTGRAG +G A +F T ++ DL
Sbjct: 392 ATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDL 451
Query: 1791 KQMMISSPVSTCPPELLN 1808
++ PEL N
Sbjct: 452 INIL-EEAGQKVSPELAN 468
Score = 338 bits (868), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 186/424 (43%), Positives = 260/424 (61%), Gaps = 31/424 (7%)
Query: 698 SLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQ 757
S+ MTE + +R IT++G VP PVR +++ P +L+ I K G+ EPTPIQ Q
Sbjct: 61 SVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQ 120
Query: 758 AIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTREL 817
P+ L+ RD+IG+AETGSGKTLA+LLP +V + + P +A GP +++APTREL
Sbjct: 121 GWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILA----PGDGPIVLVLAPTREL 176
Query: 818 AQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVL 877
A QI++E KFG I++ + GG+ + Q L+ G EIVIATPGRLID++E+ + L
Sbjct: 177 AVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIESHHTNL 236
Query: 878 NQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQ 937
+ TY+VLDEADRM+DMGFEP ++KI V+ ++PD RQ
Sbjct: 237 RRVTYLVLDEADRMLDMGFEPQIKKI-----VSQIRPD--------------------RQ 271
Query: 938 TVMFTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLN 996
T+ ++AT P VE+LAR++L P V IGS K I Q V ILSE K KL+ +L
Sbjct: 272 TLYWSATWPKEVEQLARNFLFDPYKVIIGSEELKANHAISQHVEILSESQKYNKLVNLLE 331
Query: 997 RGVKKP-VIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILV 1055
+ ++IF++ KKG D + + L G+ A ++HG K Q +R+ L+ K G I+
Sbjct: 332 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMT 391
Query: 1056 ATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDL 1115
ATDVA RG+D+KDV VINYD S+EDY HRIGRTGRAG +G A +F T ++ DL
Sbjct: 392 ATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDL 451
Query: 1116 KQMM 1119
++
Sbjct: 452 INIL 455
Score = 218 bits (556), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 138/370 (37%), Positives = 194/370 (52%), Gaps = 78/370 (21%)
Query: 2 IEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDA 61
I K G+ EPTPIQ Q P+ L+ RD+IG+AETGSGKTLA+LLP +V + + P +A
Sbjct: 106 ITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILA----P 161
Query: 62 DQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIAT 121
GP +++APTRELA QI++E KFG I++ + GG+ + Q L+ G EIVIAT
Sbjct: 162 GDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIAT 221
Query: 122 PGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDE 181
PGRLID++E+ + L + TY+VLDEADRM+DMGFEP ++KI V+ ++PD
Sbjct: 222 PGRLIDMIESHHTNLRRVTYLVLDEADRMLDMGFEPQIKKI-----VSQIRPD------- 269
Query: 182 NKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKY 241
RQT+ ++AT P
Sbjct: 270 -------------RQTLYWSATWP------------------------------------ 280
Query: 242 RQTVMFTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEV 300
VE+LAR++L P V IGS K I Q V ILSE K KL+ +
Sbjct: 281 -----------KEVEQLARNFLFDPYKVIIGSEELKANHAISQHVEILSESQKYNKLVNL 329
Query: 301 LNRGVKKP-VIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDI 359
L + ++IF++ KKG D + + L G+ A ++HG K Q +R+ L+ K G I
Sbjct: 330 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPI 389
Query: 360 LMAGDRRSRS 369
+ A D +R
Sbjct: 390 MTATDVAARG 399
>sp|Q54CE0|DDX17_DICDI Probable ATP-dependent RNA helicase ddx17 OS=Dictyostelium discoideum
GN=ddx17 PE=3 SV=1
Length = 785
Score = 333 bits (855), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 179/423 (42%), Positives = 256/423 (60%), Gaps = 31/423 (7%)
Query: 699 LDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQA 758
+ + T+ + FR + +T+KG +VP P+ + +A P +++ I G+ PTPIQ QA
Sbjct: 355 VSKFTQEEIEKFRASFQMTVKGREVPPPIMQFTQAPFPGYLMKEIIGAGFPNPTPIQSQA 414
Query: 759 IPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELA 818
PI L+ RDIIG+A+TGSGKTLAFLLP +V I + P + D GP +++APTRELA
Sbjct: 415 WPIALKGRDIIGLAKTGSGKTLAFLLPSIVHINAQPVLRE----DDGPIVLVLAPTRELA 470
Query: 819 QQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLN 878
QI+EETNKFG I V GG S+ Q L+ G EIVIATPGRLID+LE+ L
Sbjct: 471 LQIQEETNKFGGTSQISNTCVYGGASKHTQVAALKKGVEIVIATPGRLIDILESGKTNLR 530
Query: 879 QCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQT 938
+ TY+VLDEADRM+DMGFEP ++KI ++ ++PD RQT
Sbjct: 531 RVTYLVLDEADRMLDMGFEPQIRKI-----ISQIRPD--------------------RQT 565
Query: 939 VMFTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLNR 997
+MF+AT P V+ LA +L V+IGS + QIV + + +K+++++ L
Sbjct: 566 LMFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVEVCQDFEKKERMLSFLGS 625
Query: 998 -GVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVA 1056
G + VI+F +KG D L + L+ G+ + +HG K Q +R+ L+ K G I++A
Sbjct: 626 VGRDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIA 685
Query: 1057 TDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLK 1116
TDVA RG+DIKD+ V+NYD +IE Y HRIGRT RAG G++ S T D++ L +L
Sbjct: 686 TDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARAGASGVSYSLLTTDNARLANELI 745
Query: 1117 QMM 1119
+++
Sbjct: 746 KVL 748
Score = 333 bits (855), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 179/423 (42%), Positives = 256/423 (60%), Gaps = 31/423 (7%)
Query: 1374 LDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQA 1433
+ + T+ + FR + +T+KG +VP P+ + +A P +++ I G+ PTPIQ QA
Sbjct: 355 VSKFTQEEIEKFRASFQMTVKGREVPPPIMQFTQAPFPGYLMKEIIGAGFPNPTPIQSQA 414
Query: 1434 IPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELA 1493
PI L+ RDIIG+A+TGSGKTLAFLLP +V I + P + D GP +++APTRELA
Sbjct: 415 WPIALKGRDIIGLAKTGSGKTLAFLLPSIVHINAQPVLRE----DDGPIVLVLAPTRELA 470
Query: 1494 QQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLN 1553
QI+EETNKFG I V GG S+ Q L+ G EIVIATPGRLID+LE+ L
Sbjct: 471 LQIQEETNKFGGTSQISNTCVYGGASKHTQVAALKKGVEIVIATPGRLIDILESGKTNLR 530
Query: 1554 QCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQT 1613
+ TY+VLDEADRM+DMGFEP ++KI ++ ++PD RQT
Sbjct: 531 RVTYLVLDEADRMLDMGFEPQIRKI-----ISQIRPD--------------------RQT 565
Query: 1614 VMFTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLNR 1672
+MF+AT P V+ LA +L V+IGS + QIV + + +K+++++ L
Sbjct: 566 LMFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVEVCQDFEKKERMLSFLGS 625
Query: 1673 -GVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVA 1731
G + VI+F +KG D L + L+ G+ + +HG K Q +R+ L+ K G I++A
Sbjct: 626 VGRDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIA 685
Query: 1732 TDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLK 1791
TDVA RG+DIKD+ V+NYD +IE Y HRIGRT RAG G++ S T D++ L +L
Sbjct: 686 TDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARAGASGVSYSLLTTDNARLANELI 745
Query: 1792 QMM 1794
+++
Sbjct: 746 KVL 748
Score = 222 bits (565), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 138/365 (37%), Positives = 189/365 (51%), Gaps = 78/365 (21%)
Query: 6 GYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGP 65
G+ PTPIQ QA PI L+ RDIIG+A+TGSGKTLAFLLP +V I + P + D GP
Sbjct: 403 GFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSIVHINAQPVLRE----DDGP 458
Query: 66 YAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRL 125
+++APTRELA QI+EETNKFG I V GG S+ Q L+ G EIVIATPGRL
Sbjct: 459 IVLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQVAALKKGVEIVIATPGRL 518
Query: 126 IDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLL 185
ID+LE+ L + TY+VLDEADRM+DMGFEP ++KI ++ ++PD
Sbjct: 519 IDILESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKI-----ISQIRPD----------- 562
Query: 186 ANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTV 245
RQT+MF+AT P
Sbjct: 563 ---------RQTLMFSATWP---------------------------------------- 573
Query: 246 MFTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLNR- 303
V+ LA +L V+IGS + QIV + + +K+++++ L
Sbjct: 574 -------KEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVEVCQDFEKKERMLSFLGSV 626
Query: 304 GVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILMAG 363
G + VI+F +KG D L + L+ G+ + +HG K Q +R+ L+ K G I++A
Sbjct: 627 GRDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIAT 686
Query: 364 DRRSR 368
D SR
Sbjct: 687 DVASR 691
>sp|Q9C718|RH20_ARATH DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana
GN=RH20 PE=1 SV=1
Length = 501
Score = 332 bits (851), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/420 (41%), Positives = 265/420 (63%), Gaps = 31/420 (7%)
Query: 702 MTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPI 761
MT+ + +R+ IT++G +P PV+++++ P +LE ++K G+ EPTPIQ Q P+
Sbjct: 73 MTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPM 132
Query: 762 GLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQI 821
++ RD+IG+AETGSGKTL++LLP +V + + P +A + GP +++APTRELA QI
Sbjct: 133 AMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGD----GPIVLVLAPTRELAVQI 188
Query: 822 EEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCT 881
++E +KFG+ I+T + GG+ + Q L+ G EIVIATPGRLID++E+ L + T
Sbjct: 189 QQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVT 248
Query: 882 YIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMF 941
Y+VLDEADRM+DMGF+P ++KI V++++PD RQT+ +
Sbjct: 249 YLVLDEADRMLDMGFDPQIRKI-----VSHIRPD--------------------RQTLYW 283
Query: 942 TATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLNRGVK 1000
+AT P VE+L++ +L P V IGS K I QIV ++SE K KL+++L +
Sbjct: 284 SATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMD 343
Query: 1001 KP-VIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDV 1059
+++F++ KKG D + + L G+ A ++HG K Q +R+ L+ + G I+ ATDV
Sbjct: 344 GSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDV 403
Query: 1060 AGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMM 1119
A RG+D+KDV VINYD S+EDY HRIGRTGRAG +G A +F T ++ +L ++
Sbjct: 404 AARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNIL 463
Score = 332 bits (851), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/420 (41%), Positives = 265/420 (63%), Gaps = 31/420 (7%)
Query: 1377 MTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPI 1436
MT+ + +R+ IT++G +P PV+++++ P +LE ++K G+ EPTPIQ Q P+
Sbjct: 73 MTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPM 132
Query: 1437 GLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQI 1496
++ RD+IG+AETGSGKTL++LLP +V + + P +A + GP +++APTRELA QI
Sbjct: 133 AMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGD----GPIVLVLAPTRELAVQI 188
Query: 1497 EEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCT 1556
++E +KFG+ I+T + GG+ + Q L+ G EIVIATPGRLID++E+ L + T
Sbjct: 189 QQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVT 248
Query: 1557 YIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMF 1616
Y+VLDEADRM+DMGF+P ++KI V++++PD RQT+ +
Sbjct: 249 YLVLDEADRMLDMGFDPQIRKI-----VSHIRPD--------------------RQTLYW 283
Query: 1617 TATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLNRGVK 1675
+AT P VE+L++ +L P V IGS K I QIV ++SE K KL+++L +
Sbjct: 284 SATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMD 343
Query: 1676 KP-VIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDV 1734
+++F++ KKG D + + L G+ A ++HG K Q +R+ L+ + G I+ ATDV
Sbjct: 344 GSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDV 403
Query: 1735 AGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMM 1794
A RG+D+KDV VINYD S+EDY HRIGRTGRAG +G A +F T ++ +L ++
Sbjct: 404 AARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNIL 463
Score = 217 bits (552), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 199/369 (53%), Gaps = 78/369 (21%)
Query: 2 IEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDA 61
++K G+ EPTPIQ Q P+ ++ RD+IG+AETGSGKTL++LLP +V + + P +A +
Sbjct: 114 VKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGD-- 171
Query: 62 DQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIAT 121
GP +++APTRELA QI++E +KFG+ I+T + GG+ + Q L+ G EIVIAT
Sbjct: 172 --GPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIAT 229
Query: 122 PGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDE 181
PGRLID++E+ L + TY+VLDEADRM+DMGF+P ++KI V++++PD
Sbjct: 230 PGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKI-----VSHIRPD------- 277
Query: 182 NKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKY 241
RQT+ ++AT P
Sbjct: 278 -------------RQTLYWSATWP------------------------------------ 288
Query: 242 RQTVMFTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEV 300
VE+L++ +L P V IGS K I QIV ++SE K KL+++
Sbjct: 289 -----------KEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKL 337
Query: 301 LNRGVKKP-VIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDI 359
L + +++F++ KKG D + + L G+ A ++HG K Q +R+ L+ + G I
Sbjct: 338 LEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPI 397
Query: 360 LMAGDRRSR 368
+ A D +R
Sbjct: 398 MTATDVAAR 406
>sp|Q5N7W4|RH30_ORYSJ DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp.
japonica GN=Os01g0911100 PE=2 SV=2
Length = 666
Score = 332 bits (850), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 181/424 (42%), Positives = 260/424 (61%), Gaps = 31/424 (7%)
Query: 698 SLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQ 757
++ M++ D +R IT++G VP PVR ++EA+ P ++ I K G+ EPTPIQ Q
Sbjct: 221 AVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQ 280
Query: 758 AIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTREL 817
P+ L+ RD+IG+A+TGSGKTL++LLP LV + + P R+E D GP +I+APTREL
Sbjct: 281 GWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQP---RLEQGD-GPIVLILAPTREL 336
Query: 818 AQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVL 877
A QI++E+ KFG+ R+ + GG + Q LR G EIVIATPGRLID+LE + L
Sbjct: 337 AVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGGHTNL 396
Query: 878 NQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQ 937
+ TY+VLDEADRM+DMGFEP ++KI V ++PD RQ
Sbjct: 397 RRVTYLVLDEADRMLDMGFEPQIRKI-----VAQIRPD--------------------RQ 431
Query: 938 TVMFTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLN 996
T+ ++AT P VE LAR +L+ P V IGS K I+QI+ ++SE +K +L ++L+
Sbjct: 432 TLYWSATWPREVESLARQFLQNPYKVIIGSPDLKANHSIQQIIEVISEHEKYPRLSKLLS 491
Query: 997 RGVKKP-VIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILV 1055
+ ++IF KK D + + L G+ A ++HG K Q +R+ L K G I+
Sbjct: 492 DLMDGSRILIFFQTKKDCDKVTRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMA 551
Query: 1056 ATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDL 1115
ATDVA RG+D+KD+ VIN+D ++EDY HRIGRTGRAG G A +F T ++ +L
Sbjct: 552 ATDVAARGLDVKDIKCVINFDFPTTLEDYIHRIGRTGRAGASGTAFTFFTLSNAKFSRNL 611
Query: 1116 KQMM 1119
+++
Sbjct: 612 VKIL 615
Score = 332 bits (850), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 181/424 (42%), Positives = 260/424 (61%), Gaps = 31/424 (7%)
Query: 1373 SLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQ 1432
++ M++ D +R IT++G VP PVR ++EA+ P ++ I K G+ EPTPIQ Q
Sbjct: 221 AVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQ 280
Query: 1433 AIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTREL 1492
P+ L+ RD+IG+A+TGSGKTL++LLP LV + + P R+E D GP +I+APTREL
Sbjct: 281 GWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQP---RLEQGD-GPIVLILAPTREL 336
Query: 1493 AQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVL 1552
A QI++E+ KFG+ R+ + GG + Q LR G EIVIATPGRLID+LE + L
Sbjct: 337 AVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGGHTNL 396
Query: 1553 NQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQ 1612
+ TY+VLDEADRM+DMGFEP ++KI V ++PD RQ
Sbjct: 397 RRVTYLVLDEADRMLDMGFEPQIRKI-----VAQIRPD--------------------RQ 431
Query: 1613 TVMFTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLN 1671
T+ ++AT P VE LAR +L+ P V IGS K I+QI+ ++SE +K +L ++L+
Sbjct: 432 TLYWSATWPREVESLARQFLQNPYKVIIGSPDLKANHSIQQIIEVISEHEKYPRLSKLLS 491
Query: 1672 RGVKKP-VIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILV 1730
+ ++IF KK D + + L G+ A ++HG K Q +R+ L K G I+
Sbjct: 492 DLMDGSRILIFFQTKKDCDKVTRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMA 551
Query: 1731 ATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDL 1790
ATDVA RG+D+KD+ VIN+D ++EDY HRIGRTGRAG G A +F T ++ +L
Sbjct: 552 ATDVAARGLDVKDIKCVINFDFPTTLEDYIHRIGRTGRAGASGTAFTFFTLSNAKFSRNL 611
Query: 1791 KQMM 1794
+++
Sbjct: 612 VKIL 615
Score = 214 bits (546), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 139/369 (37%), Positives = 195/369 (52%), Gaps = 78/369 (21%)
Query: 2 IEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDA 61
I K G+ EPTPIQ Q P+ L+ RD+IG+A+TGSGKTL++LLP LV + + P R+E
Sbjct: 266 IAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQP---RLEQG 322
Query: 62 DQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIAT 121
D GP +I+APTRELA QI++E+ KFG+ R+ + GG + Q LR G EIVIAT
Sbjct: 323 D-GPIVLILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIAT 381
Query: 122 PGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDE 181
PGRLID+LE + L + TY+VLDEADRM+DMGFEP ++KI V ++PD
Sbjct: 382 PGRLIDMLEGGHTNLRRVTYLVLDEADRMLDMGFEPQIRKI-----VAQIRPD------- 429
Query: 182 NKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKY 241
RQT+ ++AT P
Sbjct: 430 -------------RQTLYWSATWP------------------------------------ 440
Query: 242 RQTVMFTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEV 300
R+ VE LAR +L+ P V IGS K I+QI+ ++SE +K +L ++
Sbjct: 441 RE-----------VESLARQFLQNPYKVIIGSPDLKANHSIQQIIEVISEHEKYPRLSKL 489
Query: 301 LNRGVKKP-VIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDI 359
L+ + ++IF KK D + + L G+ A ++HG K Q +R+ L K G I
Sbjct: 490 LSDLMDGSRILIFFQTKKDCDKVTRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPI 549
Query: 360 LMAGDRRSR 368
+ A D +R
Sbjct: 550 MAATDVAAR 558
>sp|Q8H0U8|RH42_ARATH DEAD-box ATP-dependent RNA helicase 42 OS=Arabidopsis thaliana
GN=RH42 PE=1 SV=2
Length = 1166
Score = 329 bits (843), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 254/423 (60%), Gaps = 33/423 (7%)
Query: 697 KSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQR 756
K + MT+ + +R++ + + G VP P++ W + L ++IL+ ++K+ Y +P PIQ
Sbjct: 498 KDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQT 557
Query: 757 QAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRE 816
QA+PI + RD IGVA+TGSGKTL F+LP+L I+ P + +A GP ++MAPTRE
Sbjct: 558 QALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPV----EAGDGPIGLVMAPTRE 613
Query: 817 LAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVL---ENR 873
L QQI + KF PLGIR V V GG +Q L+ G EIV+ TPGR+ID+L +
Sbjct: 614 LVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGK 673
Query: 874 YLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKK 933
L + T++V+DEADRM DMGFEP + +I++ N++P+
Sbjct: 674 ITNLRRVTFLVMDEADRMFDMGFEPQITRIIQ-----NIRPE------------------ 710
Query: 934 KYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKKLME 993
RQTV+F+AT P VE LAR L +P + +G + I Q+V + E D+ +L+E
Sbjct: 711 --RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLE 768
Query: 994 VLNRGVKK-PVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKD 1052
+L +K +++FV ++ D L + + K Y +LHGGK Q RE ++ K +
Sbjct: 769 LLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCN 828
Query: 1053 ILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLF 1112
+L+AT VA RG+D+K++ +V+N+D EDY HR+GRTGRAG++G AV+F ++DD+
Sbjct: 829 LLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYA 888
Query: 1113 YDL 1115
DL
Sbjct: 889 PDL 891
Score = 329 bits (843), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 254/423 (60%), Gaps = 33/423 (7%)
Query: 1372 KSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQR 1431
K + MT+ + +R++ + + G VP P++ W + L ++IL+ ++K+ Y +P PIQ
Sbjct: 498 KDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQT 557
Query: 1432 QAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRE 1491
QA+PI + RD IGVA+TGSGKTL F+LP+L I+ P + +A GP ++MAPTRE
Sbjct: 558 QALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPV----EAGDGPIGLVMAPTRE 613
Query: 1492 LAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVL---ENR 1548
L QQI + KF PLGIR V V GG +Q L+ G EIV+ TPGR+ID+L +
Sbjct: 614 LVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGK 673
Query: 1549 YLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKK 1608
L + T++V+DEADRM DMGFEP + +I++ N++P+
Sbjct: 674 ITNLRRVTFLVMDEADRMFDMGFEPQITRIIQ-----NIRPE------------------ 710
Query: 1609 KYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKKLME 1668
RQTV+F+AT P VE LAR L +P + +G + I Q+V + E D+ +L+E
Sbjct: 711 --RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLE 768
Query: 1669 VLNRGVKK-PVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKD 1727
+L +K +++FV ++ D L + + K Y +LHGGK Q RE ++ K +
Sbjct: 769 LLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCN 828
Query: 1728 ILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLF 1787
+L+AT VA RG+D+K++ +V+N+D EDY HR+GRTGRAG++G AV+F ++DD+
Sbjct: 829 LLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYA 888
Query: 1788 YDL 1790
DL
Sbjct: 889 PDL 891
Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/365 (35%), Positives = 186/365 (50%), Gaps = 80/365 (21%)
Query: 2 IEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDA 61
++K+ Y +P PIQ QA+PI + RD IGVA+TGSGKTL F+LP+L I+ P + +A
Sbjct: 544 MKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPV----EA 599
Query: 62 DQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIAT 121
GP ++MAPTREL QQI + KF PLGIR V V GG +Q L+ G EIV+ T
Sbjct: 600 GDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCT 659
Query: 122 PGRLIDVL---ENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDA 178
PGR+ID+L + L + T++V+DEADRM DMGFEP + +I++ N++P+
Sbjct: 660 PGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQ-----NIRPE---- 710
Query: 179 EDENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSK 238
RQTV+F+AT P
Sbjct: 711 ----------------RQTVLFSATFP--------------------------------- 721
Query: 239 KKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKKLM 298
RQ VE LAR L +P + +G + I Q+V + E D+ +L+
Sbjct: 722 ---RQ-----------VETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLL 767
Query: 299 EVLNRGVKK-PVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSK 357
E+L +K +++FV ++ D L + + K Y +LHGGK Q RE ++ K
Sbjct: 768 ELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVC 827
Query: 358 DILMA 362
++L+A
Sbjct: 828 NLLIA 832
>sp|Q4PFD9|PRP5_USTMA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Ustilago
maydis (strain 521 / FGSC 9021) GN=PRP5 PE=3 SV=1
Length = 1156
Score = 325 bits (833), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 182/425 (42%), Positives = 247/425 (58%), Gaps = 38/425 (8%)
Query: 1390 SITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAET 1449
+IT++G P P+ W LP L++I+++GY+ PTPIQ QA+P + RDIIGVA+T
Sbjct: 463 AITVRGRDCPKPLTKWSHCGLPASCLDVIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAKT 522
Query: 1450 GSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGI 1509
GSGKT+AFLLP+ I K R + +GP IIM PTRELA QI E F LG+
Sbjct: 523 GSGKTMAFLLPMFRHI----KDQRPVEPSEGPVGIIMTPTRELAVQIYREMRPFIKALGL 578
Query: 1510 RTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVL---ENRYLVLNQCTYIVLDEADRM 1566
R V GG EQ ++ +IV+ATPGRLID+L R L + TY+VLDEADRM
Sbjct: 579 RAACVYGGAPISEQIAEMKKTADIVVATPGRLIDLLTANSGRVTNLYRVTYLVLDEADRM 638
Query: 1567 IDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVER 1626
DMGFEP V KIL N++PD RQTV+F+AT P +E
Sbjct: 639 FDMGFEPQVMKIL-----NNIRPD--------------------RQTVLFSATFPKQMES 673
Query: 1627 LARSYLR-RPATVYIGSVGKPTERIEQIVYILSEQDKRKKLMEVL----NRGVKKPVIIF 1681
LAR L+ +P + +G IEQIV + SE K +L+E+L NR +IF
Sbjct: 674 LARKVLKNKPLEITVGGRSVVAAEIEQIVEVRSEDTKFHRLLEILGELYNREKDARTLIF 733
Query: 1682 VNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDI 1741
V++++ AD L K L + GY +LHGGK Q R+ ++ K G+ I+ AT VA RG+D+
Sbjct: 734 VDRQEAADDLLKDLIRKGYVTMSLHGGKDQVDRDETISDFKAGNVPIVTATSVAARGLDV 793
Query: 1742 KDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVST 1801
K + +VINYD+ +EDY HR GRTGRAG++G ++F T + D+ + +S +
Sbjct: 794 KQLKLVINYDVPNHMEDYVHRAGRTGRAGQKGTCITFITPEQDRYARDIIAALKAS-AAH 852
Query: 1802 CPPEL 1806
PPEL
Sbjct: 853 VPPEL 857
Score = 323 bits (829), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 182/431 (42%), Positives = 247/431 (57%), Gaps = 37/431 (8%)
Query: 715 SITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAET 774
+IT++G P P+ W LP L++I+++GY+ PTPIQ QA+P + RDIIGVA+T
Sbjct: 463 AITVRGRDCPKPLTKWSHCGLPASCLDVIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAKT 522
Query: 775 GSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGI 834
GSGKT+AFLLP+ I K R + +GP IIM PTRELA QI E F LG+
Sbjct: 523 GSGKTMAFLLPMFRHI----KDQRPVEPSEGPVGIIMTPTRELAVQIYREMRPFIKALGL 578
Query: 835 RTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVL---ENRYLVLNQCTYIVLDEADRM 891
R V GG EQ ++ +IV+ATPGRLID+L R L + TY+VLDEADRM
Sbjct: 579 RAACVYGGAPISEQIAEMKKTADIVVATPGRLIDLLTANSGRVTNLYRVTYLVLDEADRM 638
Query: 892 IDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVER 951
DMGFEP V KIL N++PD RQTV+F+AT P +E
Sbjct: 639 FDMGFEPQVMKIL-----NNIRPD--------------------RQTVLFSATFPKQMES 673
Query: 952 LARSYLR-RPATVYIGSVGKPTERIEQIVYILSEQDKRKKLMEVL----NRGVKKPVIIF 1006
LAR L+ +P + +G IEQIV + SE K +L+E+L NR +IF
Sbjct: 674 LARKVLKNKPLEITVGGRSVVAAEIEQIVEVRSEDTKFHRLLEILGELYNREKDARTLIF 733
Query: 1007 VNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDI 1066
V++++ AD L K L + GY +LHGGK Q R+ ++ K G+ I+ AT VA RG+D+
Sbjct: 734 VDRQEAADDLLKDLIRKGYVTMSLHGGKDQVDRDETISDFKAGNVPIVTATSVAARGLDV 793
Query: 1067 KDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVTG 1126
K + +VINYD+ +EDY HR GRTGRAG++G ++F T + D+ + +S
Sbjct: 794 KQLKLVINYDVPNHMEDYVHRAGRTGRAGQKGTCITFITPEQDRYARDIIAALKASAAHV 853
Query: 1127 RAGKEGLAVSF 1137
E +A SF
Sbjct: 854 PPELEAMAASF 864
Score = 211 bits (536), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 141/370 (38%), Positives = 187/370 (50%), Gaps = 84/370 (22%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMED 60
+I+++GY+ PTPIQ QA+P + RDIIGVA+TGSGKT+AFLLP+ I K R +
Sbjct: 490 VIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHI----KDQRPVE 545
Query: 61 ADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIA 120
+GP IIM PTRELA QI E F LG+R V GG EQ ++ +IV+A
Sbjct: 546 PSEGPVGIIMTPTRELAVQIYREMRPFIKALGLRAACVYGGAPISEQIAEMKKTADIVVA 605
Query: 121 TPGRLIDVL---ENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTED 177
TPGRLID+L R L + TY+VLDEADRM DMGFEP V KIL N++PD
Sbjct: 606 TPGRLIDLLTANSGRVTNLYRVTYLVLDEADRMFDMGFEPQVMKIL-----NNIRPD--- 657
Query: 178 AEDENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNS 237
RQTV+F+AT P
Sbjct: 658 -----------------RQTVLFSATFP-------------------------------- 668
Query: 238 KKKYRQTVMFTATMPPAVERLARSYLR-RPATVYIGSVGKPTERIEQIVYILSEQDKRKK 296
+Q +E LAR L+ +P + +G IEQIV + SE K +
Sbjct: 669 ----KQ-----------MESLARKVLKNKPLEITVGGRSVVAAEIEQIVEVRSEDTKFHR 713
Query: 297 LMEVL----NRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSL 352
L+E+L NR +IFV++++ AD L K L + GY +LHGGK Q R+ ++
Sbjct: 714 LLEILGELYNREKDARTLIFVDRQEAADDLLKDLIRKGYVTMSLHGGKDQVDRDETISDF 773
Query: 353 KGGSKDILMA 362
K G+ I+ A
Sbjct: 774 KAGNVPIVTA 783
>sp|Q6CIV2|DBP2_KLULA ATP-dependent RNA helicase DBP2 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=DBP2 PE=3 SV=1
Length = 554
Score = 325 bits (832), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 181/423 (42%), Positives = 259/423 (61%), Gaps = 33/423 (7%)
Query: 701 EMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIP 760
+M+E + FR++ +TI G VP P+R++ EA P+ +L+ +++ G+A+PT IQ Q P
Sbjct: 86 QMSESEVIEFRKENEMTISGHDVPKPIRSFDEAGFPSYVLDEVKQEGFAKPTGIQCQGWP 145
Query: 761 IGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQ 820
+ L RD+IGVA TGSGKTL++ LP +V I + P ++ GP +++APTRELA Q
Sbjct: 146 MALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLS----PGDGPIVLVLAPTRELAVQ 201
Query: 821 IEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQC 880
I++E +KFG IR V GG+ + +Q L+ G EI+IATPGRLID+LE L +
Sbjct: 202 IQKECSKFGASSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDMLEIGKTNLKRV 261
Query: 881 TYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVM 940
TY+VLDEADRM+DMGFEP ++KI V ++PD RQT+M
Sbjct: 262 TYLVLDEADRMLDMGFEPQIRKI-----VDQIRPD--------------------RQTLM 296
Query: 941 FTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKL---MEVLN 996
++AT P V++LA YL P V IGS+ + I QIV +L++ +KR +L +E +
Sbjct: 297 WSATWPKEVKQLASDYLHDPIQVQIGSLELSASHTITQIVEVLTDFEKRDRLAKHLETAS 356
Query: 997 RGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVA 1056
+ +IIF + K+ D + L G+ A +HG K Q +R+ L + G I+VA
Sbjct: 357 QDQDSKIIIFASTKRTCDEITSYLRTEGWPALAIHGDKAQNERDWVLAEFRSGRSPIMVA 416
Query: 1057 TDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLK 1116
TDVA RGID+K ++ VINYDM +IEDY HRIGRTGRAG G A+SF T+ + L L
Sbjct: 417 TDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGSTGTAISFFTEGNKSLGAALI 476
Query: 1117 QMM 1119
++M
Sbjct: 477 KIM 479
Score = 325 bits (832), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 181/423 (42%), Positives = 259/423 (61%), Gaps = 33/423 (7%)
Query: 1376 EMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIP 1435
+M+E + FR++ +TI G VP P+R++ EA P+ +L+ +++ G+A+PT IQ Q P
Sbjct: 86 QMSESEVIEFRKENEMTISGHDVPKPIRSFDEAGFPSYVLDEVKQEGFAKPTGIQCQGWP 145
Query: 1436 IGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQ 1495
+ L RD+IGVA TGSGKTL++ LP +V I + P ++ GP +++APTRELA Q
Sbjct: 146 MALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLS----PGDGPIVLVLAPTRELAVQ 201
Query: 1496 IEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQC 1555
I++E +KFG IR V GG+ + +Q L+ G EI+IATPGRLID+LE L +
Sbjct: 202 IQKECSKFGASSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDMLEIGKTNLKRV 261
Query: 1556 TYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVM 1615
TY+VLDEADRM+DMGFEP ++KI V ++PD RQT+M
Sbjct: 262 TYLVLDEADRMLDMGFEPQIRKI-----VDQIRPD--------------------RQTLM 296
Query: 1616 FTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKL---MEVLN 1671
++AT P V++LA YL P V IGS+ + I QIV +L++ +KR +L +E +
Sbjct: 297 WSATWPKEVKQLASDYLHDPIQVQIGSLELSASHTITQIVEVLTDFEKRDRLAKHLETAS 356
Query: 1672 RGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVA 1731
+ +IIF + K+ D + L G+ A +HG K Q +R+ L + G I+VA
Sbjct: 357 QDQDSKIIIFASTKRTCDEITSYLRTEGWPALAIHGDKAQNERDWVLAEFRSGRSPIMVA 416
Query: 1732 TDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLK 1791
TDVA RGID+K ++ VINYDM +IEDY HRIGRTGRAG G A+SF T+ + L L
Sbjct: 417 TDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGSTGTAISFFTEGNKSLGAALI 476
Query: 1792 QMM 1794
++M
Sbjct: 477 KIM 479
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 189/372 (50%), Gaps = 80/372 (21%)
Query: 2 IEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDA 61
+++ G+A+PT IQ Q P+ L RD+IGVA TGSGKTL++ LP +V I + P ++
Sbjct: 128 VKQEGFAKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLS----P 183
Query: 62 DQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIAT 121
GP +++APTRELA QI++E +KFG IR V GG+ + +Q L+ G EI+IAT
Sbjct: 184 GDGPIVLVLAPTRELAVQIQKECSKFGASSRIRNTCVYGGVPKSQQIRDLQRGVEILIAT 243
Query: 122 PGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDE 181
PGRLID+LE L + TY+VLDEADRM+DMGFEP ++KI V ++PD
Sbjct: 244 PGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKI-----VDQIRPD------- 291
Query: 182 NKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKY 241
RQT+M++AT P
Sbjct: 292 -------------RQTLMWSATWP------------------------------------ 302
Query: 242 RQTVMFTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKL--- 297
V++LA YL P V IGS+ + I QIV +L++ +KR +L
Sbjct: 303 -----------KEVKQLASDYLHDPIQVQIGSLELSASHTITQIVEVLTDFEKRDRLAKH 351
Query: 298 MEVLNRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSK 357
+E ++ +IIF + K+ D + L G+ A +HG K Q +R+ L + G
Sbjct: 352 LETASQDQDSKIIIFASTKRTCDEITSYLRTEGWPALAIHGDKAQNERDWVLAEFRSGRS 411
Query: 358 DILMAGDRRSRS 369
I++A D +R
Sbjct: 412 PIMVATDVAARG 423
>sp|Q1DP69|DBP2_COCIM ATP-dependent RNA helicase DBP2 OS=Coccidioides immitis (strain RS)
GN=DBP2 PE=3 SV=2
Length = 545
Score = 324 bits (830), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 182/460 (39%), Positives = 267/460 (58%), Gaps = 42/460 (9%)
Query: 676 RLKKVKKREEKQKWD-------DRHWTEK--SLDEMTERDWRIFREDYSITIKGGKVPDP 726
R+ + ++Q+WD ++H+ ++ ++ + +D FR+++ +T+ G VP P
Sbjct: 67 RMSNLGSGLKQQEWDLNALPKFEKHFYKEHPNVTNRSAQDVEAFRKEHEMTVYGKNVPRP 126
Query: 727 VRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPL 786
V + EA P ++ ++ G+A+PTPIQ Q P+ L RD++G+AETGSGKTL + LP
Sbjct: 127 VETFDEAGFPQYVISEVKAQGFAKPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPA 186
Query: 787 LVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSRE 846
+V I + P + GP +++APTRELA QI+ E KFG IR V GG+ R
Sbjct: 187 IVHINAQPLLG----PGDGPIVLVLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPRG 242
Query: 847 EQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEY 906
Q L G E+ IATPGRLID+LE L + TY+VLDEADRM+DMGFEP ++KI
Sbjct: 243 PQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKI--- 299
Query: 907 MPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIG 966
+ ++PD RQT M++AT P V +LA +L VYIG
Sbjct: 300 --IGQIRPD--------------------RQTCMWSATWPKEVRQLAHDFLHDYIQVYIG 337
Query: 967 SVG-KPTERIEQIVYILSEQDKRKKLMEVLNRGV---KKPVIIFVNQKKGADVLAKGLEK 1022
S RI QIV I+S+ +KR +++ L R + K ++IF K+ AD + + L +
Sbjct: 338 SQDLSANHRITQIVEIVSDFEKRDRMINHLERIMDDKKSKILIFTGTKRVADDITRFLRQ 397
Query: 1023 LGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIE 1082
G+ A ++HG K Q +R+ LN K G I+VATDVA RGID++D++ V+NYD + E
Sbjct: 398 DGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSE 457
Query: 1083 DYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISS 1122
DY HRIGRTGRAG +G A++ T D++ DL ++ S
Sbjct: 458 DYVHRIGRTGRAGAKGTAITLFTTDNAKQARDLVNILTES 497
Score = 324 bits (830), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 182/460 (39%), Positives = 267/460 (58%), Gaps = 42/460 (9%)
Query: 1351 RLKKVKKREEKQKWD-------DRHWTEK--SLDEMTERDWRIFREDYSITIKGGKVPDP 1401
R+ + ++Q+WD ++H+ ++ ++ + +D FR+++ +T+ G VP P
Sbjct: 67 RMSNLGSGLKQQEWDLNALPKFEKHFYKEHPNVTNRSAQDVEAFRKEHEMTVYGKNVPRP 126
Query: 1402 VRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPL 1461
V + EA P ++ ++ G+A+PTPIQ Q P+ L RD++G+AETGSGKTL + LP
Sbjct: 127 VETFDEAGFPQYVISEVKAQGFAKPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPA 186
Query: 1462 LVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSRE 1521
+V I + P + GP +++APTRELA QI+ E KFG IR V GG+ R
Sbjct: 187 IVHINAQPLLG----PGDGPIVLVLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPRG 242
Query: 1522 EQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEY 1581
Q L G E+ IATPGRLID+LE L + TY+VLDEADRM+DMGFEP ++KI
Sbjct: 243 PQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKI--- 299
Query: 1582 MPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIG 1641
+ ++PD RQT M++AT P V +LA +L VYIG
Sbjct: 300 --IGQIRPD--------------------RQTCMWSATWPKEVRQLAHDFLHDYIQVYIG 337
Query: 1642 SVG-KPTERIEQIVYILSEQDKRKKLMEVLNRGV---KKPVIIFVNQKKGADVLAKGLEK 1697
S RI QIV I+S+ +KR +++ L R + K ++IF K+ AD + + L +
Sbjct: 338 SQDLSANHRITQIVEIVSDFEKRDRMINHLERIMDDKKSKILIFTGTKRVADDITRFLRQ 397
Query: 1698 LGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIE 1757
G+ A ++HG K Q +R+ LN K G I+VATDVA RGID++D++ V+NYD + E
Sbjct: 398 DGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSE 457
Query: 1758 DYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISS 1797
DY HRIGRTGRAG +G A++ T D++ DL ++ S
Sbjct: 458 DYVHRIGRTGRAGAKGTAITLFTTDNAKQARDLVNILTES 497
Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 185/368 (50%), Gaps = 80/368 (21%)
Query: 6 GYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGP 65
G+A+PTPIQ Q P+ L RD++G+AETGSGKTL + LP +V I + P + GP
Sbjct: 147 GFAKPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLG----PGDGP 202
Query: 66 YAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRL 125
+++APTRELA QI+ E KFG IR V GG+ R Q L G E+ IATPGRL
Sbjct: 203 IVLVLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPRGPQIRDLSRGVEVCIATPGRL 262
Query: 126 IDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLL 185
ID+LE L + TY+VLDEADRM+DMGFEP ++KI + ++PD
Sbjct: 263 IDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKI-----IGQIRPD----------- 306
Query: 186 ANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTV 245
RQT M++AT P K+ RQ
Sbjct: 307 ---------RQTCMWSATWP---------------------------------KEVRQ-- 322
Query: 246 MFTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLNRG 304
LA +L VYIGS RI QIV I+S+ +KR +++ L R
Sbjct: 323 ------------LAHDFLHDYIQVYIGSQDLSANHRITQIVEIVSDFEKRDRMINHLERI 370
Query: 305 V---KKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILM 361
+ K ++IF K+ AD + + L + G+ A ++HG K Q +R+ LN K G I++
Sbjct: 371 MDDKKSKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSPIMV 430
Query: 362 AGDRRSRS 369
A D SR
Sbjct: 431 ATDVASRG 438
>sp|Q59LU0|DBP2_CANAL ATP-dependent RNA helicase DBP2 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=DBP2 PE=3 SV=2
Length = 562
Score = 323 bits (829), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 181/433 (41%), Positives = 258/433 (59%), Gaps = 34/433 (7%)
Query: 1378 TERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIG 1437
++RD FR++ +T+KG +P P+ + EA P +L+ ++ G+ +PTPIQ Q P+
Sbjct: 102 SDRDIEQFRKENEMTVKGHDIPHPITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMA 161
Query: 1438 LQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIE 1497
L RD+IG+A TGSGKTL++ LP +V I + P++ + GP +++APTRELA QI+
Sbjct: 162 LSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQLQYGD----GPIVLVLAPTRELAVQIQ 217
Query: 1498 EETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTY 1557
E +KFG IR V GG + Q L G EI IATPGRLID+LE L + TY
Sbjct: 218 TECSKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGKTNLKRVTY 277
Query: 1558 IVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFT 1617
+VLDEADRM+DMGFEP ++KI V ++PD RQT+M++
Sbjct: 278 LVLDEADRMLDMGFEPQIRKI-----VDQIRPD--------------------RQTLMWS 312
Query: 1618 ATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLNRGVKK 1676
AT P V++L R YL P V IGS+ + I Q+V ++ E KR +L++ L + +
Sbjct: 313 ATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVKHLESALNE 372
Query: 1677 P---VIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATD 1733
+++F + K+ D + L G+ A +HG K Q +R+ L+ + G I+VATD
Sbjct: 373 KDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATD 432
Query: 1734 VAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQM 1793
VA RGID+K ++ VINYDM +IEDY HRIGRTGR G G A+SF T+ +S L DL ++
Sbjct: 433 VAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSKLGGDLCKI 492
Query: 1794 MISSPVSTCPPEL 1806
M + T PPEL
Sbjct: 493 MREAN-QTVPPEL 504
Score = 320 bits (820), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 176/421 (41%), Positives = 252/421 (59%), Gaps = 33/421 (7%)
Query: 703 TERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIG 762
++RD FR++ +T+KG +P P+ + EA P +L+ ++ G+ +PTPIQ Q P+
Sbjct: 102 SDRDIEQFRKENEMTVKGHDIPHPITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMA 161
Query: 763 LQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIE 822
L RD+IG+A TGSGKTL++ LP +V I + P++ + GP +++APTRELA QI+
Sbjct: 162 LSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQLQYGD----GPIVLVLAPTRELAVQIQ 217
Query: 823 EETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTY 882
E +KFG IR V GG + Q L G EI IATPGRLID+LE L + TY
Sbjct: 218 TECSKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGKTNLKRVTY 277
Query: 883 IVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFT 942
+VLDEADRM+DMGFEP ++KI V ++PD RQT+M++
Sbjct: 278 LVLDEADRMLDMGFEPQIRKI-----VDQIRPD--------------------RQTLMWS 312
Query: 943 ATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLNRGVKK 1001
AT P V++L R YL P V IGS+ + I Q+V ++ E KR +L++ L + +
Sbjct: 313 ATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVKHLESALNE 372
Query: 1002 P---VIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATD 1058
+++F + K+ D + L G+ A +HG K Q +R+ L+ + G I+VATD
Sbjct: 373 KDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATD 432
Query: 1059 VAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQM 1118
VA RGID+K ++ VINYDM +IEDY HRIGRTGR G G A+SF T+ +S L DL ++
Sbjct: 433 VAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSKLGGDLCKI 492
Query: 1119 M 1119
M
Sbjct: 493 M 493
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/368 (34%), Positives = 182/368 (49%), Gaps = 80/368 (21%)
Query: 6 GYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGP 65
G+ +PTPIQ Q P+ L RD+IG+A TGSGKTL++ LP +V I + P++ + GP
Sbjct: 146 GFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQLQYGD----GP 201
Query: 66 YAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRL 125
+++APTRELA QI+ E +KFG IR V GG + Q L G EI IATPGRL
Sbjct: 202 IVLVLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPGRL 261
Query: 126 IDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLL 185
ID+LE L + TY+VLDEADRM+DMGFEP ++KI V ++PD
Sbjct: 262 IDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKI-----VDQIRPD----------- 305
Query: 186 ANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTV 245
RQT+M++AT P
Sbjct: 306 ---------RQTLMWSATWP---------------------------------------- 316
Query: 246 MFTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLNRG 304
V++L R YL P V IGS+ + I Q+V ++ E KR +L++ L
Sbjct: 317 -------KEVQQLTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVKHLESA 369
Query: 305 VKK---PVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILM 361
+ + +++F + K+ D + L G+ A +HG K Q +R+ L+ + G I++
Sbjct: 370 LNEKDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMV 429
Query: 362 AGDRRSRS 369
A D +R
Sbjct: 430 ATDVAARG 437
>sp|Q6FLF3|DBP2_CANGA ATP-dependent RNA helicase DBP2 OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DBP2
PE=3 SV=1
Length = 544
Score = 323 bits (829), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 177/414 (42%), Positives = 253/414 (61%), Gaps = 33/414 (7%)
Query: 710 FREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDII 769
FR++ +TI G +P P+ + EA P +L+ ++ G+ +PT IQ Q P+ L RD++
Sbjct: 92 FRKESEMTITGHDIPKPITTFDEAGFPDYVLKEVKAEGFDKPTSIQCQGWPMALSGRDMV 151
Query: 770 GVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFG 829
G+A TGSGKTL++ LP +V I + P ++ GP +++APTRELA QI++E +KFG
Sbjct: 152 GIAATGSGKTLSYCLPGIVHINAQPLLS----PGDGPIVLVLAPTRELAVQIQKECSKFG 207
Query: 830 TPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEAD 889
IR V GG+ R +Q L G EIVIATPGRLID+LE L + TY+VLDEAD
Sbjct: 208 KSSRIRNTCVYGGVPRGQQIRELIRGAEIVIATPGRLIDMLEAGKTNLKRVTYLVLDEAD 267
Query: 890 RMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAV 949
RM+DMGFEP ++KI V ++PD RQT+M++AT P V
Sbjct: 268 RMLDMGFEPQIRKI-----VDQIRPD--------------------RQTLMWSATWPKEV 302
Query: 950 ERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLNRGVK---KPVII 1005
++LAR YL P V IGS+ + I Q+V ++SE +KR +L++ L+ + ++I
Sbjct: 303 QQLARDYLNDPIQVQIGSLELAASHNITQLVEVVSEFEKRDRLVKHLDTASQDKESKILI 362
Query: 1006 FVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGID 1065
F + K+ D + L + G+ A +HG K Q +R+ LN + G+ I+VATDVA RGID
Sbjct: 363 FASTKRTCDEITSYLRQDGWPALAIHGDKDQRERDWVLNEFRTGNSPIMVATDVAARGID 422
Query: 1066 IKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMM 1119
+K ++ V+NYDM +IEDY HRIGRTGRAG G A+SF T+D+ L L +M
Sbjct: 423 VKGINFVVNYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEDNKSLGASLISIM 476
Score = 323 bits (829), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 177/414 (42%), Positives = 253/414 (61%), Gaps = 33/414 (7%)
Query: 1385 FREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDII 1444
FR++ +TI G +P P+ + EA P +L+ ++ G+ +PT IQ Q P+ L RD++
Sbjct: 92 FRKESEMTITGHDIPKPITTFDEAGFPDYVLKEVKAEGFDKPTSIQCQGWPMALSGRDMV 151
Query: 1445 GVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFG 1504
G+A TGSGKTL++ LP +V I + P ++ GP +++APTRELA QI++E +KFG
Sbjct: 152 GIAATGSGKTLSYCLPGIVHINAQPLLS----PGDGPIVLVLAPTRELAVQIQKECSKFG 207
Query: 1505 TPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEAD 1564
IR V GG+ R +Q L G EIVIATPGRLID+LE L + TY+VLDEAD
Sbjct: 208 KSSRIRNTCVYGGVPRGQQIRELIRGAEIVIATPGRLIDMLEAGKTNLKRVTYLVLDEAD 267
Query: 1565 RMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAV 1624
RM+DMGFEP ++KI V ++PD RQT+M++AT P V
Sbjct: 268 RMLDMGFEPQIRKI-----VDQIRPD--------------------RQTLMWSATWPKEV 302
Query: 1625 ERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLNRGVK---KPVII 1680
++LAR YL P V IGS+ + I Q+V ++SE +KR +L++ L+ + ++I
Sbjct: 303 QQLARDYLNDPIQVQIGSLELAASHNITQLVEVVSEFEKRDRLVKHLDTASQDKESKILI 362
Query: 1681 FVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGID 1740
F + K+ D + L + G+ A +HG K Q +R+ LN + G+ I+VATDVA RGID
Sbjct: 363 FASTKRTCDEITSYLRQDGWPALAIHGDKDQRERDWVLNEFRTGNSPIMVATDVAARGID 422
Query: 1741 IKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMM 1794
+K ++ V+NYDM +IEDY HRIGRTGRAG G A+SF T+D+ L L +M
Sbjct: 423 VKGINFVVNYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEDNKSLGASLISIM 476
Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 130/368 (35%), Positives = 189/368 (51%), Gaps = 80/368 (21%)
Query: 6 GYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGP 65
G+ +PT IQ Q P+ L RD++G+A TGSGKTL++ LP +V I + P ++ GP
Sbjct: 129 GFDKPTSIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLS----PGDGP 184
Query: 66 YAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRL 125
+++APTRELA QI++E +KFG IR V GG+ R +Q L G EIVIATPGRL
Sbjct: 185 IVLVLAPTRELAVQIQKECSKFGKSSRIRNTCVYGGVPRGQQIRELIRGAEIVIATPGRL 244
Query: 126 IDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLL 185
ID+LE L + TY+VLDEADRM+DMGFEP ++KI V ++PD
Sbjct: 245 IDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKI-----VDQIRPD----------- 288
Query: 186 ANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTV 245
RQT+M++AT P
Sbjct: 289 ---------RQTLMWSATWP---------------------------------------- 299
Query: 246 MFTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLNRG 304
V++LAR YL P V IGS+ + I Q+V ++SE +KR +L++ L+
Sbjct: 300 -------KEVQQLARDYLNDPIQVQIGSLELAASHNITQLVEVVSEFEKRDRLVKHLDTA 352
Query: 305 VK---KPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILM 361
+ ++IF + K+ D + L + G+ A +HG K Q +R+ LN + G+ I++
Sbjct: 353 SQDKESKILIFASTKRTCDEITSYLRQDGWPALAIHGDKDQRERDWVLNEFRTGNSPIMV 412
Query: 362 AGDRRSRS 369
A D +R
Sbjct: 413 ATDVAARG 420
>sp|Q755N4|DBP2_ASHGO ATP-dependent RNA helicase DBP2 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP2 PE=3 SV=2
Length = 557
Score = 323 bits (827), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/414 (43%), Positives = 254/414 (61%), Gaps = 33/414 (7%)
Query: 710 FREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDII 769
FR++ + I G VP P+R + EA P +L+ +++ G+ +PT IQ Q P+ L RD+I
Sbjct: 96 FRKENEMKIVGHDVPKPIRTFDEAGFPEYVLKEVKEEGFEKPTAIQCQGWPMALSGRDMI 155
Query: 770 GVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFG 829
GVA TGSGKTL++ LP +V I + P ++ GP +++APTRELA QI++E +KFG
Sbjct: 156 GVAATGSGKTLSYCLPGIVHINAQPLLS----PGDGPVVLVLAPTRELAVQIQKECSKFG 211
Query: 830 TPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEAD 889
IR V GG+ + +Q L+ G EI+IATPGRLID+LE L + TY+VLDEAD
Sbjct: 212 RSSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDMLEIGKTNLKRVTYLVLDEAD 271
Query: 890 RMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAV 949
RM+DMGFEP ++KI V ++PD RQT+M++AT P V
Sbjct: 272 RMLDMGFEPQIRKI-----VDQIRPD--------------------RQTLMWSATWPKEV 306
Query: 950 ERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKL---MEVLNRGVKKPVII 1005
++LAR YL P V IGS+ + I Q+V ++S+ DKR +L +E+ ++ +II
Sbjct: 307 QQLARDYLHDPIQVNIGSLELAASHTITQLVEVVSDFDKRDRLVKHLEIASKDKDSKIII 366
Query: 1006 FVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGID 1065
F + K+ D + L + G+ A +HG K Q++R+ LN + G I+VATDVA RGID
Sbjct: 367 FASTKRTCDEITSYLRQDGWPALAIHGDKQQQERDWVLNEFRTGRSPIMVATDVAARGID 426
Query: 1066 IKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMM 1119
+K ++ VINYDM +IEDY HRIGRTGRAG G A+SF T+ + L L +M
Sbjct: 427 VKGINFVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEANKTLGAQLISIM 480
Score = 323 bits (827), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/414 (43%), Positives = 254/414 (61%), Gaps = 33/414 (7%)
Query: 1385 FREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDII 1444
FR++ + I G VP P+R + EA P +L+ +++ G+ +PT IQ Q P+ L RD+I
Sbjct: 96 FRKENEMKIVGHDVPKPIRTFDEAGFPEYVLKEVKEEGFEKPTAIQCQGWPMALSGRDMI 155
Query: 1445 GVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFG 1504
GVA TGSGKTL++ LP +V I + P ++ GP +++APTRELA QI++E +KFG
Sbjct: 156 GVAATGSGKTLSYCLPGIVHINAQPLLS----PGDGPVVLVLAPTRELAVQIQKECSKFG 211
Query: 1505 TPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEAD 1564
IR V GG+ + +Q L+ G EI+IATPGRLID+LE L + TY+VLDEAD
Sbjct: 212 RSSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDMLEIGKTNLKRVTYLVLDEAD 271
Query: 1565 RMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAV 1624
RM+DMGFEP ++KI V ++PD RQT+M++AT P V
Sbjct: 272 RMLDMGFEPQIRKI-----VDQIRPD--------------------RQTLMWSATWPKEV 306
Query: 1625 ERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKL---MEVLNRGVKKPVII 1680
++LAR YL P V IGS+ + I Q+V ++S+ DKR +L +E+ ++ +II
Sbjct: 307 QQLARDYLHDPIQVNIGSLELAASHTITQLVEVVSDFDKRDRLVKHLEIASKDKDSKIII 366
Query: 1681 FVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGID 1740
F + K+ D + L + G+ A +HG K Q++R+ LN + G I+VATDVA RGID
Sbjct: 367 FASTKRTCDEITSYLRQDGWPALAIHGDKQQQERDWVLNEFRTGRSPIMVATDVAARGID 426
Query: 1741 IKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMM 1794
+K ++ VINYDM +IEDY HRIGRTGRAG G A+SF T+ + L L +M
Sbjct: 427 VKGINFVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEANKTLGAQLISIM 480
Score = 204 bits (518), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 131/368 (35%), Positives = 190/368 (51%), Gaps = 80/368 (21%)
Query: 6 GYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGP 65
G+ +PT IQ Q P+ L RD+IGVA TGSGKTL++ LP +V I + P ++ GP
Sbjct: 133 GFEKPTAIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLS----PGDGP 188
Query: 66 YAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRL 125
+++APTRELA QI++E +KFG IR V GG+ + +Q L+ G EI+IATPGRL
Sbjct: 189 VVLVLAPTRELAVQIQKECSKFGRSSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRL 248
Query: 126 IDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLL 185
ID+LE L + TY+VLDEADRM+DMGFEP ++KI V ++PD
Sbjct: 249 IDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKI-----VDQIRPD----------- 292
Query: 186 ANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTV 245
RQT+M++AT P
Sbjct: 293 ---------RQTLMWSATWP---------------------------------------- 303
Query: 246 MFTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKL---MEVL 301
V++LAR YL P V IGS+ + I Q+V ++S+ DKR +L +E+
Sbjct: 304 -------KEVQQLARDYLHDPIQVNIGSLELAASHTITQLVEVVSDFDKRDRLVKHLEIA 356
Query: 302 NRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILM 361
++ +IIF + K+ D + L + G+ A +HG K Q++R+ LN + G I++
Sbjct: 357 SKDKDSKIIIFASTKRTCDEITSYLRQDGWPALAIHGDKQQQERDWVLNEFRTGRSPIMV 416
Query: 362 AGDRRSRS 369
A D +R
Sbjct: 417 ATDVAARG 424
>sp|A5DL80|DBP2_PICGU ATP-dependent RNA helicase DBP2 OS=Meyerozyma guilliermondii (strain
ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 /
NRRL Y-324) GN=DBP2 PE=3 SV=3
Length = 554
Score = 323 bits (827), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 184/436 (42%), Positives = 258/436 (59%), Gaps = 34/436 (7%)
Query: 1378 TERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIG 1437
+E + + FR+++ + G +P P+ ++ EA P +L +++ G+ +PT IQ Q P+
Sbjct: 100 SESEVQSFRKEHDMKCVGTDIPKPITSFDEAGFPDYVLNEVKQQGFPKPTAIQCQGWPMA 159
Query: 1438 LQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIE 1497
L RD+IG+A TGSGKTL++ LP +V I + P + GP +++APTRELA QI+
Sbjct: 160 LSGRDMIGIAATGSGKTLSYCLPSIVHINAQPLLG----PGDGPIVLVLAPTRELAVQIQ 215
Query: 1498 EETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTY 1557
+E +KFG IR + GG + +Q L G EI IATPGRLID+LE L + TY
Sbjct: 216 QECSKFGASSRIRNTCIYGGAPKGQQIRDLARGVEICIATPGRLIDMLETGKTNLRRVTY 275
Query: 1558 IVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFT 1617
+VLDEADRM+DMGFEP ++KI++ ++PD RQT+M++
Sbjct: 276 LVLDEADRMLDMGFEPQIRKIVD-----QIRPD--------------------RQTLMWS 310
Query: 1618 ATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLNRGV-- 1674
AT P V+ L R YL P V IGS+ + I QIV +LSE +KR +L++ L
Sbjct: 311 ATWPKEVQTLTRDYLNDPIQVTIGSLELAASHTITQIVEVLSEFEKRDRLVKHLETATAD 370
Query: 1675 -KKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATD 1733
+ V+IF + K+ D + L G+ A +HG K Q +R+ L K G I+VATD
Sbjct: 371 KEAKVLIFSSTKRACDEITSYLRADGWPALAIHGDKQQNERDWVLREFKTGKSPIMVATD 430
Query: 1734 VAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQM 1793
VA RGID+K +S VINYDM +IEDY HRIGRTGRAG G AVS T+ +S L DL ++
Sbjct: 431 VAARGIDVKGISYVINYDMPGNIEDYVHRIGRTGRAGTTGTAVSLFTEANSKLGGDLCKI 490
Query: 1794 MISSPVSTCPPELLNH 1809
M + T PPELL +
Sbjct: 491 MREAN-QTVPPELLRY 505
Score = 317 bits (813), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 178/421 (42%), Positives = 250/421 (59%), Gaps = 33/421 (7%)
Query: 703 TERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIG 762
+E + + FR+++ + G +P P+ ++ EA P +L +++ G+ +PT IQ Q P+
Sbjct: 100 SESEVQSFRKEHDMKCVGTDIPKPITSFDEAGFPDYVLNEVKQQGFPKPTAIQCQGWPMA 159
Query: 763 LQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIE 822
L RD+IG+A TGSGKTL++ LP +V I + P + GP +++APTRELA QI+
Sbjct: 160 LSGRDMIGIAATGSGKTLSYCLPSIVHINAQPLLG----PGDGPIVLVLAPTRELAVQIQ 215
Query: 823 EETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTY 882
+E +KFG IR + GG + +Q L G EI IATPGRLID+LE L + TY
Sbjct: 216 QECSKFGASSRIRNTCIYGGAPKGQQIRDLARGVEICIATPGRLIDMLETGKTNLRRVTY 275
Query: 883 IVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFT 942
+VLDEADRM+DMGFEP ++KI++ ++PD RQT+M++
Sbjct: 276 LVLDEADRMLDMGFEPQIRKIVD-----QIRPD--------------------RQTLMWS 310
Query: 943 ATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLNRGV-- 999
AT P V+ L R YL P V IGS+ + I QIV +LSE +KR +L++ L
Sbjct: 311 ATWPKEVQTLTRDYLNDPIQVTIGSLELAASHTITQIVEVLSEFEKRDRLVKHLETATAD 370
Query: 1000 -KKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATD 1058
+ V+IF + K+ D + L G+ A +HG K Q +R+ L K G I+VATD
Sbjct: 371 KEAKVLIFSSTKRACDEITSYLRADGWPALAIHGDKQQNERDWVLREFKTGKSPIMVATD 430
Query: 1059 VAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQM 1118
VA RGID+K +S VINYDM +IEDY HRIGRTGRAG G AVS T+ +S L DL ++
Sbjct: 431 VAARGIDVKGISYVINYDMPGNIEDYVHRIGRTGRAGTTGTAVSLFTEANSKLGGDLCKI 490
Query: 1119 M 1119
M
Sbjct: 491 M 491
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 183/371 (49%), Gaps = 80/371 (21%)
Query: 2 IEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDA 61
+++ G+ +PT IQ Q P+ L RD+IG+A TGSGKTL++ LP +V I + P +
Sbjct: 140 VKQQGFPKPTAIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPLLG----P 195
Query: 62 DQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIAT 121
GP +++APTRELA QI++E +KFG IR + GG + +Q L G EI IAT
Sbjct: 196 GDGPIVLVLAPTRELAVQIQQECSKFGASSRIRNTCIYGGAPKGQQIRDLARGVEICIAT 255
Query: 122 PGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDE 181
PGRLID+LE L + TY+VLDEADRM+DMGFEP ++KI V ++PD
Sbjct: 256 PGRLIDMLETGKTNLRRVTYLVLDEADRMLDMGFEPQIRKI-----VDQIRPD------- 303
Query: 182 NKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKY 241
RQT+M++AT P
Sbjct: 304 -------------RQTLMWSATWP------------------------------------ 314
Query: 242 RQTVMFTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEV 300
V+ L R YL P V IGS+ + I QIV +LSE +KR +L++
Sbjct: 315 -----------KEVQTLTRDYLNDPIQVTIGSLELAASHTITQIVEVLSEFEKRDRLVKH 363
Query: 301 LNRGV---KKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSK 357
L + V+IF + K+ D + L G+ A +HG K Q +R+ L K G
Sbjct: 364 LETATADKEAKVLIFSSTKRACDEITSYLRADGWPALAIHGDKQQNERDWVLREFKTGKS 423
Query: 358 DILMAGDRRSR 368
I++A D +R
Sbjct: 424 PIMVATDVAAR 434
>sp|Q9P7C7|PRP11_SCHPO Pre-mRNA-processing ATP-dependent RNA helicase prp11
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp11 PE=3 SV=1
Length = 1014
Score = 323 bits (827), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/411 (41%), Positives = 238/411 (57%), Gaps = 36/411 (8%)
Query: 716 ITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETG 775
I I+G P PV +W + L + + +I +GY +PT IQ QAIP RD+IGVA+TG
Sbjct: 406 IKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTG 465
Query: 776 SGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIR 835
SGKT+AFLLP+ I K R +GP AIIM PTRELA QI E F L IR
Sbjct: 466 SGKTIAFLLPMFRHI----KDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIR 521
Query: 836 TVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLE---NRYLVLNQCTYIVLDEADRMI 892
GG ++Q L+ G EIV+ TPGR+IDVL R L++CTY+VLDEADRM
Sbjct: 522 ACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMF 581
Query: 893 DMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERL 952
D+GFEP V +I + N++PD RQTV+F+AT P A+E L
Sbjct: 582 DLGFEPQVMRI-----INNIRPD--------------------RQTVLFSATFPRAMEAL 616
Query: 953 ARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKKLMEVL----NRGVKKPVIIFVN 1008
AR L++P + +G +EQIV + E+ K +L+E+L N + ++FV+
Sbjct: 617 ARKVLKKPVEITVGGRSVVASEVEQIVEVRPEESKFSRLLELLGELYNNQLDVRTLVFVD 676
Query: 1009 QKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKD 1068
+++ AD L L K GY + ++HGGK Q R+ ++ K G D+L+AT V RG+D+K
Sbjct: 677 RQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKS 736
Query: 1069 VSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMM 1119
+ +V+NYD +EDY HR+GRTGRAG G+AV+F T + D+ + +
Sbjct: 737 LQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQEKYAVDIAKAL 787
Score = 323 bits (827), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/411 (41%), Positives = 238/411 (57%), Gaps = 36/411 (8%)
Query: 1391 ITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETG 1450
I I+G P PV +W + L + + +I +GY +PT IQ QAIP RD+IGVA+TG
Sbjct: 406 IKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTG 465
Query: 1451 SGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIR 1510
SGKT+AFLLP+ I K R +GP AIIM PTRELA QI E F L IR
Sbjct: 466 SGKTIAFLLPMFRHI----KDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIR 521
Query: 1511 TVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLE---NRYLVLNQCTYIVLDEADRMI 1567
GG ++Q L+ G EIV+ TPGR+IDVL R L++CTY+VLDEADRM
Sbjct: 522 ACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMF 581
Query: 1568 DMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERL 1627
D+GFEP V +I + N++PD RQTV+F+AT P A+E L
Sbjct: 582 DLGFEPQVMRI-----INNIRPD--------------------RQTVLFSATFPRAMEAL 616
Query: 1628 ARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKKLMEVL----NRGVKKPVIIFVN 1683
AR L++P + +G +EQIV + E+ K +L+E+L N + ++FV+
Sbjct: 617 ARKVLKKPVEITVGGRSVVASEVEQIVEVRPEESKFSRLLELLGELYNNQLDVRTLVFVD 676
Query: 1684 QKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKD 1743
+++ AD L L K GY + ++HGGK Q R+ ++ K G D+L+AT V RG+D+K
Sbjct: 677 RQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKS 736
Query: 1744 VSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMM 1794
+ +V+NYD +EDY HR+GRTGRAG G+AV+F T + D+ + +
Sbjct: 737 LQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQEKYAVDIAKAL 787
Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/369 (36%), Positives = 184/369 (49%), Gaps = 83/369 (22%)
Query: 1 IIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMED 60
+I +GY +PT IQ QAIP RD+IGVA+TGSGKT+AFLLP+ I K R
Sbjct: 432 VINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRHI----KDQRPLK 487
Query: 61 ADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIA 120
+GP AIIM PTRELA QI E F L IR GG ++Q L+ G EIV+
Sbjct: 488 TGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPIKDQIADLKRGAEIVVC 547
Query: 121 TPGRLIDVLE---NRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTED 177
TPGR+IDVL R L++CTY+VLDEADRM D+GFEP V +I + N++PD
Sbjct: 548 TPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRI-----INNIRPD--- 599
Query: 178 AEDENKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNS 237
RQTV+F+AT P
Sbjct: 600 -----------------RQTVLFSATFP-------------------------------- 610
Query: 238 KKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKKL 297
A+E LAR L++P + +G +EQIV + E+ K +L
Sbjct: 611 ---------------RAMEALARKVLKKPVEITVGGRSVVASEVEQIVEVRPEESKFSRL 655
Query: 298 MEVL----NRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLK 353
+E+L N + ++FV++++ AD L L K GY + ++HGGK Q R+ ++ K
Sbjct: 656 LELLGELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYK 715
Query: 354 GGSKDILMA 362
G D+L+A
Sbjct: 716 AGVFDVLIA 724
>sp|Q6BY27|DBP2_DEBHA ATP-dependent RNA helicase DBP2 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP2 PE=3 SV=1
Length = 536
Score = 321 bits (822), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 179/432 (41%), Positives = 257/432 (59%), Gaps = 34/432 (7%)
Query: 1380 RDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQ 1439
+D FR+++ + G +P P+ ++ EA P +L+ +++ G+ +PT IQ Q P+ L
Sbjct: 82 QDVNAFRKEHDMKCDGTDIPKPITSFDEAGFPDYVLKEVKQQGFPKPTSIQCQGWPMALS 141
Query: 1440 NRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEE 1499
RD++G+A TGSGKTL++ LP +V I + P ++ GP +++APTRELA QI++E
Sbjct: 142 GRDMVGIASTGSGKTLSYCLPSIVHINAQPLLS----PGDGPIVLVLAPTRELAVQIQQE 197
Query: 1500 TNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIV 1559
+KFG+ IR V GG + +Q L G EI IATPGRLID+LE L + TY+V
Sbjct: 198 CSKFGSSSRIRNTCVYGGAPKGQQIRDLARGVEICIATPGRLIDMLETGKTNLRRVTYLV 257
Query: 1560 LDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTAT 1619
LDEADRM+DMGFEP ++KI++ ++PD RQT+M++AT
Sbjct: 258 LDEADRMLDMGFEPQIRKIVD-----QIRPD--------------------RQTLMWSAT 292
Query: 1620 MPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLNRGVKKP- 1677
P V+ L R YL P V +GS+ + I Q+V +++E +KR +L++ L P
Sbjct: 293 WPKEVQALTRDYLNDPIQVTVGSLELAASHTITQLVEVVTEFEKRDRLIKHLETATADPE 352
Query: 1678 --VIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVA 1735
+IF + K+ D + L G+ A +HG K Q +R+ L K G I+VATDVA
Sbjct: 353 AKCLIFASTKRTCDEITNYLRADGWPALAIHGDKQQGERDWVLKEFKTGKSPIMVATDVA 412
Query: 1736 GRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMMI 1795
RGID+K +S VIN DM +IEDY HRIGRTGRAG G AVSF T ++S L DL ++M
Sbjct: 413 ARGIDVKGISYVINLDMPGNIEDYVHRIGRTGRAGSTGTAVSFFTDNNSKLGGDLCKIMR 472
Query: 1796 SSPVSTCPPELL 1807
+ T PPEL+
Sbjct: 473 EAN-QTIPPELM 483
Score = 317 bits (811), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 174/419 (41%), Positives = 250/419 (59%), Gaps = 33/419 (7%)
Query: 705 RDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQ 764
+D FR+++ + G +P P+ ++ EA P +L+ +++ G+ +PT IQ Q P+ L
Sbjct: 82 QDVNAFRKEHDMKCDGTDIPKPITSFDEAGFPDYVLKEVKQQGFPKPTSIQCQGWPMALS 141
Query: 765 NRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEE 824
RD++G+A TGSGKTL++ LP +V I + P ++ GP +++APTRELA QI++E
Sbjct: 142 GRDMVGIASTGSGKTLSYCLPSIVHINAQPLLS----PGDGPIVLVLAPTRELAVQIQQE 197
Query: 825 TNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIV 884
+KFG+ IR V GG + +Q L G EI IATPGRLID+LE L + TY+V
Sbjct: 198 CSKFGSSSRIRNTCVYGGAPKGQQIRDLARGVEICIATPGRLIDMLETGKTNLRRVTYLV 257
Query: 885 LDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTAT 944
LDEADRM+DMGFEP ++KI++ ++PD RQT+M++AT
Sbjct: 258 LDEADRMLDMGFEPQIRKIVD-----QIRPD--------------------RQTLMWSAT 292
Query: 945 MPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVLNRGVKKP- 1002
P V+ L R YL P V +GS+ + I Q+V +++E +KR +L++ L P
Sbjct: 293 WPKEVQALTRDYLNDPIQVTVGSLELAASHTITQLVEVVTEFEKRDRLIKHLETATADPE 352
Query: 1003 --VIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVA 1060
+IF + K+ D + L G+ A +HG K Q +R+ L K G I+VATDVA
Sbjct: 353 AKCLIFASTKRTCDEITNYLRADGWPALAIHGDKQQGERDWVLKEFKTGKSPIMVATDVA 412
Query: 1061 GRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMM 1119
RGID+K +S VIN DM +IEDY HRIGRTGRAG G AVSF T ++S L DL ++M
Sbjct: 413 ARGIDVKGISYVINLDMPGNIEDYVHRIGRTGRAGSTGTAVSFFTDNNSKLGGDLCKIM 471
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 125/371 (33%), Positives = 185/371 (49%), Gaps = 80/371 (21%)
Query: 2 IEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDA 61
+++ G+ +PT IQ Q P+ L RD++G+A TGSGKTL++ LP +V I + P ++
Sbjct: 120 VKQQGFPKPTSIQCQGWPMALSGRDMVGIASTGSGKTLSYCLPSIVHINAQPLLS----P 175
Query: 62 DQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIAT 121
GP +++APTRELA QI++E +KFG+ IR V GG + +Q L G EI IAT
Sbjct: 176 GDGPIVLVLAPTRELAVQIQQECSKFGSSSRIRNTCVYGGAPKGQQIRDLARGVEICIAT 235
Query: 122 PGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDE 181
PGRLID+LE L + TY+VLDEADRM+DMGFEP ++KI++ ++PD
Sbjct: 236 PGRLIDMLETGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVD-----QIRPD------- 283
Query: 182 NKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKY 241
RQT+M++AT P
Sbjct: 284 -------------RQTLMWSATWP------------------------------------ 294
Query: 242 RQTVMFTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEV 300
V+ L R YL P V +GS+ + I Q+V +++E +KR +L++
Sbjct: 295 -----------KEVQALTRDYLNDPIQVTVGSLELAASHTITQLVEVVTEFEKRDRLIKH 343
Query: 301 LNRGVKKP---VIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSK 357
L P +IF + K+ D + L G+ A +HG K Q +R+ L K G
Sbjct: 344 LETATADPEAKCLIFASTKRTCDEITNYLRADGWPALAIHGDKQQGERDWVLKEFKTGKS 403
Query: 358 DILMAGDRRSR 368
I++A D +R
Sbjct: 404 PIMVATDVAAR 414
>sp|A1DGZ7|DBP2_NEOFI ATP-dependent RNA helicase dbp2 OS=Neosartorya fischeri (strain ATCC
1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp2 PE=3
SV=1
Length = 545
Score = 320 bits (821), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 180/423 (42%), Positives = 254/423 (60%), Gaps = 37/423 (8%)
Query: 703 TERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIG 762
+ER+ FR+ + +T++G VP PV N+ EA P +L ++ G+ PT IQ Q P+
Sbjct: 94 SEREVEEFRKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMA 153
Query: 763 LQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIE 822
L RD++G+AETGSGKTL + LP +V I + P +A GP +I+APTRELA QI+
Sbjct: 154 LSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLA----PGDGPIVLILAPTRELAVQIQ 209
Query: 823 EETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTY 882
E +KFG IR V GG+ + Q L G E+ IATPGRLID+LE L + TY
Sbjct: 210 TEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTY 269
Query: 883 IVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFT 942
+VLDEADRM+DMGFEP ++KI ++ ++PD RQT M++
Sbjct: 270 LVLDEADRMLDMGFEPQIRKI-----ISQIRPD--------------------RQTCMWS 304
Query: 943 ATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVL-----N 996
AT P V +LA +L V IGS+ RI QIV ++S+ +KR K+++ L N
Sbjct: 305 ATWPKEVRQLATDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMEN 364
Query: 997 RGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVA 1056
RG K +IF K+ AD + + L + G+ A ++HG K Q++R+ LN K G I+VA
Sbjct: 365 RGNK--CLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVA 422
Query: 1057 TDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLK 1116
TDVA RGID++D++ V+NYD + EDY HRIGRTGRAG +G A++F T ++S DL
Sbjct: 423 TDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQARDLV 482
Query: 1117 QMM 1119
++
Sbjct: 483 TIL 485
Score = 320 bits (821), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 180/423 (42%), Positives = 254/423 (60%), Gaps = 37/423 (8%)
Query: 1378 TERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIG 1437
+ER+ FR+ + +T++G VP PV N+ EA P +L ++ G+ PT IQ Q P+
Sbjct: 94 SEREVEEFRKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMA 153
Query: 1438 LQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIE 1497
L RD++G+AETGSGKTL + LP +V I + P +A GP +I+APTRELA QI+
Sbjct: 154 LSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLA----PGDGPIVLILAPTRELAVQIQ 209
Query: 1498 EETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTY 1557
E +KFG IR V GG+ + Q L G E+ IATPGRLID+LE L + TY
Sbjct: 210 TEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTY 269
Query: 1558 IVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFT 1617
+VLDEADRM+DMGFEP ++KI ++ ++PD RQT M++
Sbjct: 270 LVLDEADRMLDMGFEPQIRKI-----ISQIRPD--------------------RQTCMWS 304
Query: 1618 ATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVL-----N 1671
AT P V +LA +L V IGS+ RI QIV ++S+ +KR K+++ L N
Sbjct: 305 ATWPKEVRQLATDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMEN 364
Query: 1672 RGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVA 1731
RG K +IF K+ AD + + L + G+ A ++HG K Q++R+ LN K G I+VA
Sbjct: 365 RGNK--CLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVA 422
Query: 1732 TDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLK 1791
TDVA RGID++D++ V+NYD + EDY HRIGRTGRAG +G A++F T ++S DL
Sbjct: 423 TDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQARDLV 482
Query: 1792 QMM 1794
++
Sbjct: 483 TIL 485
Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 187/369 (50%), Gaps = 84/369 (22%)
Query: 6 GYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGP 65
G+ PT IQ Q P+ L RD++G+AETGSGKTL + LP +V I + P +A GP
Sbjct: 138 GFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLA----PGDGP 193
Query: 66 YAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRL 125
+I+APTRELA QI+ E +KFG IR V GG+ + Q L G E+ IATPGRL
Sbjct: 194 IVLILAPTRELAVQIQTEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRL 253
Query: 126 IDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLL 185
ID+LE L + TY+VLDEADRM+DMGFEP ++KI ++ ++PD
Sbjct: 254 IDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKI-----ISQIRPD----------- 297
Query: 186 ANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTV 245
RQT M++AT P K+ RQ
Sbjct: 298 ---------RQTCMWSATWP---------------------------------KEVRQ-- 313
Query: 246 MFTATMPPAVERLARSYLRRPATVYIGSVG-KPTERIEQIVYILSEQDKRKKLMEVL--- 301
LA +L V IGS+ RI QIV ++S+ +KR K+++ L
Sbjct: 314 ------------LATDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKI 361
Query: 302 --NRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDI 359
NRG K +IF K+ AD + + L + G+ A ++HG K Q++R+ LN K G I
Sbjct: 362 MENRGNK--CLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPI 419
Query: 360 LMAGDRRSR 368
++A D SR
Sbjct: 420 MVATDVASR 428
>sp|Q10MH8|RH24_ORYSJ DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp.
japonica GN=Os03g0308500 PE=2 SV=1
Length = 770
Score = 320 bits (820), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 182/453 (40%), Positives = 268/453 (59%), Gaps = 34/453 (7%)
Query: 1360 EKQKWDDRHWTEK-SLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEII 1418
E + ++ + EK S+ M+E++ + + +I + G VP P++++ + P +++ I
Sbjct: 175 EYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAI 234
Query: 1419 EKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDAD 1478
K GY +PT IQ QA+PI L RDIIG+A+TGSGKT AF+LP++V I P++ + +
Sbjct: 235 AKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEK----E 290
Query: 1479 QGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATP 1538
+GP ++ APTRELA QI E KF P +R V GG+S+ +Q L+ GCEIVIATP
Sbjct: 291 EGPIGVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIATP 350
Query: 1539 GRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDEN 1598
GRLID+L+ + L + + TY+VLDEADRM D+GFEP ++ I V ++PD
Sbjct: 351 GRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSI-----VGQIRPD-------- 397
Query: 1599 KLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYIL- 1657
RQT++F+ATMP VERLAR L P V +G VG E I+Q+V +L
Sbjct: 398 ------------RQTLLFSATMPYKVERLAREILTDPIRVTVGQVGSANEDIKQVVNVLP 445
Query: 1658 SEQDKRKKLMEVLNRGVKK-PVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQREL 1716
S+ +K L+E L + V++F +K D + L + G+ LHG K Q R
Sbjct: 446 SDAEKMPWLLEKLPGMIDDGDVLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQASRME 505
Query: 1717 ALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAG-KEGLA 1775
L K G +LVATDVA RG+DIK + V+N+D+AK ++ + HRIGRTGRAG K+G A
Sbjct: 506 TLQKFKSGVYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTA 565
Query: 1776 VSFCTKDDSHLFYDLKQMMISSPVSTCPPELLN 1808
+ T+ + +L +I++ P EL++
Sbjct: 566 YTLITQKEVRFAGELVHCLIAA-GQDVPNELMD 597
Score = 320 bits (820), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 179/442 (40%), Positives = 263/442 (59%), Gaps = 33/442 (7%)
Query: 685 EKQKWDDRHWTEK-SLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEII 743
E + ++ + EK S+ M+E++ + + +I + G VP P++++ + P +++ I
Sbjct: 175 EYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAI 234
Query: 744 EKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDAD 803
K GY +PT IQ QA+PI L RDIIG+A+TGSGKT AF+LP++V I P++ + +
Sbjct: 235 AKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEK----E 290
Query: 804 QGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATP 863
+GP ++ APTRELA QI E KF P +R V GG+S+ +Q L+ GCEIVIATP
Sbjct: 291 EGPIGVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIATP 350
Query: 864 GRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDEN 923
GRLID+L+ + L + + TY+VLDEADRM D+GFEP ++ I V ++PD
Sbjct: 351 GRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSI-----VGQIRPD-------- 397
Query: 924 KLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYIL- 982
RQT++F+ATMP VERLAR L P V +G VG E I+Q+V +L
Sbjct: 398 ------------RQTLLFSATMPYKVERLAREILTDPIRVTVGQVGSANEDIKQVVNVLP 445
Query: 983 SEQDKRKKLMEVLNRGVKK-PVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQREL 1041
S+ +K L+E L + V++F +K D + L + G+ LHG K Q R
Sbjct: 446 SDAEKMPWLLEKLPGMIDDGDVLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQASRME 505
Query: 1042 ALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAG-KEGLA 1100
L K G +LVATDVA RG+DIK + V+N+D+AK ++ + HRIGRTGRAG K+G A
Sbjct: 506 TLQKFKSGVYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTA 565
Query: 1101 VSFCTKDDSHLFYDLKQMMISS 1122
+ T+ + +L +I++
Sbjct: 566 YTLITQKEVRFAGELVHCLIAA 587
Score = 218 bits (554), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 149/409 (36%), Positives = 205/409 (50%), Gaps = 83/409 (20%)
Query: 2 IEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDA 61
I K GY +PT IQ QA+PI L RDIIG+A+TGSGKT AF+LP++V I P++ +
Sbjct: 234 IAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEK---- 289
Query: 62 DQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIAT 121
++GP ++ APTRELA QI E KF P +R V GG+S+ +Q L+ GCEIVIAT
Sbjct: 290 EEGPIGVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIAT 349
Query: 122 PGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDE 181
PGRLID+L+ + L + + TY+VLDEADRM D+GFEP ++ I V ++PD
Sbjct: 350 PGRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSI-----VGQIRPD------- 397
Query: 182 NKLLANYNSKKKYRQTVMFTATMPPAKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKY 241
RQT++F+ATMP Y
Sbjct: 398 -------------RQTLLFSATMP-----------------------------------Y 409
Query: 242 RQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYIL-SEQDKRKKLMEV 300
+ VERLAR L P V +G VG E I+Q+V +L S+ +K L+E
Sbjct: 410 K------------VERLAREILTDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWLLEK 457
Query: 301 LNRGVKK-PVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDI 359
L + V++F +K D + L + G+ LHG K Q R L K G +
Sbjct: 458 LPGMIDDGDVLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQASRMETLQKFKSGVYHV 517
Query: 360 LMAGDRRSRSRSPPRKRRSRSRERDYDRVRERDTDRSRDDR-GRDRDRD 407
L+A D +R +S ++D +E D R R GR D+D
Sbjct: 518 LVATDVAARGLD----IKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKD 562
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 706,059,760
Number of Sequences: 539616
Number of extensions: 33045627
Number of successful extensions: 293179
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2725
Number of HSP's successfully gapped in prelim test: 4271
Number of HSP's that attempted gapping in prelim test: 151365
Number of HSP's gapped (non-prelim): 66263
length of query: 1832
length of database: 191,569,459
effective HSP length: 132
effective length of query: 1700
effective length of database: 120,340,147
effective search space: 204578249900
effective search space used: 204578249900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)