BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6410
(169 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9GMB0|RPN1_PIG Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1 OS=Sus scrofa GN=RPN1 PE=1 SV=1
Length = 608
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 82/122 (67%), Gaps = 9/122 (7%)
Query: 51 WGTLNIESFTSVMPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEV 110
+ N+ES+T + T+ E + YGP+ +VPPY++ +H ENNSPFL +T + R IEV
Sbjct: 178 LASRNVESYTKLGNPTRSEDLLDYGPFRDVPPYSQDTFKVHSENNSPFLTITSMTRVIEV 237
Query: 111 SHW------EHIHLKHDGAKLKGTFSRYDYQRDSAHG---IKSFKTILPAAASDAYYRDE 161
SHW E++ LKH GA LKG FSRYDYQR G I+SFKTILPAAA D YYRDE
Sbjct: 238 SHWGNIAVEENVDLKHTGAVLKGPFSRYDYQRQPDSGISSIRSFKTILPAAAQDVYYRDE 297
Query: 162 IG 163
IG
Sbjct: 298 IG 299
>sp|Q4R4T0|RPN1_MACFA Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1 OS=Macaca fascicularis GN=RPN1 PE=2 SV=1
Length = 607
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 81/118 (68%), Gaps = 9/118 (7%)
Query: 55 NIESFTSVMPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHW- 113
N+ES+T + T+ E + YGP+ +VP Y++ +HYENNSPFL +T + R IEVSHW
Sbjct: 181 NVESYTKLGNPTRSEDLLDYGPFRDVPAYSQDTFKVHYENNSPFLTITSMTRVIEVSHWG 240
Query: 114 -----EHIHLKHDGAKLKGTFSRYDYQRDSAHG---IKSFKTILPAAASDAYYRDEIG 163
E++ LKH GA LKG FSRYDYQR G I+SFKTILPAAA D YYRDEIG
Sbjct: 241 NIAVEENVDLKHTGAVLKGPFSRYDYQRQPDSGISSIRSFKTILPAAAQDVYYRDEIG 298
>sp|Q5RFB6|RPN1_PONAB Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1 OS=Pongo abelii GN=RPN1 PE=2 SV=1
Length = 607
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 81/118 (68%), Gaps = 9/118 (7%)
Query: 55 NIESFTSVMPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHW- 113
N+ES+T + T+ E + YGP+ +VP Y++ +HYENNSPFL +T + R IEVSHW
Sbjct: 181 NVESYTKLGNPTRSEDLLDYGPFRDVPAYSQDTFKVHYENNSPFLTITSMTRVIEVSHWG 240
Query: 114 -----EHIHLKHDGAKLKGTFSRYDYQRDSAHG---IKSFKTILPAAASDAYYRDEIG 163
E++ LKH GA LKG FSRYDYQR G I+SFKTILPAAA D YYRDEIG
Sbjct: 241 NIAVEENVDLKHTGAVLKGPFSRYDYQRQPDSGISSIRSFKTILPAAAQDVYYRDEIG 298
>sp|P04843|RPN1_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1 OS=Homo sapiens GN=RPN1 PE=1 SV=1
Length = 607
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 81/118 (68%), Gaps = 9/118 (7%)
Query: 55 NIESFTSVMPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHW- 113
N+ES+T + T+ E + YGP+ +VP Y++ +HYENNSPFL +T + R IEVSHW
Sbjct: 181 NVESYTKLGNPTRSEDLLDYGPFRDVPAYSQDTFKVHYENNSPFLTITSMTRVIEVSHWG 240
Query: 114 -----EHIHLKHDGAKLKGTFSRYDYQRDSAHG---IKSFKTILPAAASDAYYRDEIG 163
E++ LKH GA LKG FSRYDYQR G I+SFKTILPAAA D YYRDEIG
Sbjct: 241 NIAVEENVDLKHTGAVLKGPFSRYDYQRQPDSGISSIRSFKTILPAAAQDVYYRDEIG 298
>sp|Q91YQ5|RPN1_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1 OS=Mus musculus GN=Rpn1 PE=2 SV=1
Length = 608
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 9/122 (7%)
Query: 51 WGTLNIESFTSVMPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEV 110
+ N+ES+T + ++ E + YGP++++P Y++ +HYENNSPFL +T + R IEV
Sbjct: 178 LASRNVESYTKLGNPSRSEDVLDYGPFKDIPAYSQDTFKVHYENNSPFLTITSMTRVIEV 237
Query: 111 SHW------EHIHLKHDGAKLKGTFSRYDYQRDSAHG---IKSFKTILPAAASDAYYRDE 161
SHW E++ LKH GA LKG FSRYDYQR G I+SFKTILPAAA D YYRDE
Sbjct: 238 SHWGNIAVEENVDLKHTGAVLKGPFSRYDYQRQPDSGISSIRSFKTILPAAAQDVYYRDE 297
Query: 162 IG 163
IG
Sbjct: 298 IG 299
>sp|P07153|RPN1_RAT Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1 OS=Rattus norvegicus GN=Rpn1 PE=2 SV=1
Length = 605
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 82/122 (67%), Gaps = 9/122 (7%)
Query: 51 WGTLNIESFTSVMPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEV 110
+ N+ES T + ++ E + YGP++++P Y++ +HYENNSPFL +T + R IEV
Sbjct: 175 LASRNVESHTKLGNPSRSEDILDYGPFKDIPAYSQDTFKVHYENNSPFLTITSMTRVIEV 234
Query: 111 SHW------EHIHLKHDGAKLKGTFSRYDYQRDSAHG---IKSFKTILPAAASDAYYRDE 161
SHW E++ LKH GA LKG FSRYDYQR G I+SFKTILPAAA D YYRDE
Sbjct: 235 SHWGNIAVEENVDLKHTGAVLKGPFSRYDYQRQPDSGISSIRSFKTILPAAAQDVYYRDE 294
Query: 162 IG 163
IG
Sbjct: 295 IG 296
>sp|Q9ZUA0|OST1B_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1B OS=Arabidopsis thaliana GN=OST1B PE=2 SV=1
Length = 464
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 72/118 (61%), Gaps = 10/118 (8%)
Query: 56 IESFTSVMPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHW-- 113
+ESFTS+ P + + I YGPYEN Y+ + IH+ENNSPF VV LVR+IE+SHW
Sbjct: 180 VESFTSIEPANRAGKEIKYGPYENRASYSYTPVIIHFENNSPFAVVEELVREIEISHWGS 239
Query: 114 ----EHIHLKHDGAKLKGTFSRYDYQ-RDSAHGIKSFK---TILPAAASDAYYRDEIG 163
E+ L H GA+ KG FSR DYQ + S G SF +LP + YYRDEIG
Sbjct: 240 LQITENYRLTHGGARHKGVFSRVDYQSKRSVSGASSFNALLAVLPPRVNSVYYRDEIG 297
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 2 PTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGTLNI 56
P + + I YGPYEN Y+ + IH+ENNSPF VV LVR+IE+SHWG+L I
Sbjct: 188 PANRAGKEIKYGPYENRASYSYTPVIIHFENNSPFAVVEELVREIEISHWGSLQI 242
>sp|Q0DJC5|OST1A_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1A OS=Oryza sativa subsp. japonica GN=OST1A PE=2
SV=1
Length = 615
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 75/118 (63%), Gaps = 10/118 (8%)
Query: 56 IESFTSVMPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHW-- 113
+ES+T T E + YGPYE++PP++ + + +HYENN+PF V ++R+IE+SHW
Sbjct: 182 VESYTKYPNTKLAESELKYGPYEDLPPFSYSPMVVHYENNNPFAVAKEVIREIEISHWGN 241
Query: 114 ----EHIHLKHDGAKLKGTFSRYDYQ-RDSAHGIKSFKTI---LPAAASDAYYRDEIG 163
EH ++ H GAKLKG FSR DYQ R G+ SF+ + LP A YYRDEIG
Sbjct: 242 VQITEHYNIAHGGAKLKGEFSRIDYQSRPYIRGVSSFRHLIARLPPRAHSIYYRDEIG 299
>sp|B9FDT1|OST1B_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1B OS=Oryza sativa subsp. japonica GN=OST1B PE=2
SV=1
Length = 473
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 81/146 (55%), Gaps = 10/146 (6%)
Query: 28 IHYENNSPFLVVTRLVRQIEVSHWGTLNIESFTSVMPTTQVEQTITYGPYENVPPYTKAN 87
++Y +++ L ++ Q+ + +ESFT V PT++ + YG Y N P +
Sbjct: 161 VYYRDSAVLLSPYHVLEQVTYIKMPSNRVESFTRVDPTSRAGNEVKYGAYNNQLPNSYVP 220
Query: 88 ITIHYENNSPFLVVTRLVRQIEVSHW------EHIHLKHDGAKLKGTFSRYDYQ-RDSAH 140
I +HYENN PF VV VR++E+SHW E LKH GA+ KG FSR +YQ R S
Sbjct: 221 ILVHYENNRPFAVVEEFVRKVEISHWGNVQITEQYKLKHGGAQHKGVFSRLEYQSRPSIS 280
Query: 141 GIKSFKTI---LPAAASDAYYRDEIG 163
G+ SFK + LP YYRDEIG
Sbjct: 281 GVSSFKNLLARLPPRVHSVYYRDEIG 306
>sp|Q54C27|OST1_DICDI Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1 OS=Dictyostelium discoideum GN=ost1 PE=2 SV=1
Length = 460
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 90/170 (52%), Gaps = 13/170 (7%)
Query: 3 TTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGTLNIESFTSV 62
T+ +EQ I Y P E T+ + Y NN F + Q + +ES++
Sbjct: 124 TSMIEQMIPY-PSEIKQGQTQL---VLYLNNHYFTSPYKTETQKTTVKLASSKVESYSEE 179
Query: 63 MPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHW------EHI 116
PT+ T+TYGPY + ++ + + IHYEN SPF V+T L+++ EVSHW H
Sbjct: 180 QPTSLKGMTVTYGPYSAIEAFSVSPMRIHYENGSPFFVLTNLLKEYEVSHWGNLAVETHY 239
Query: 117 HLKHDGAKLKGTFSRYDYQRDSA---HGIKSFKTILPAAASDAYYRDEIG 163
L++ GA L G FSR DYQR+ + + I +P +A+D YYRD IG
Sbjct: 240 QLENKGAHLVGAFSRLDYQRNPSVNPNQIAEVNEAVPLSATDFYYRDSIG 289
>sp|Q9SFX3|OST1A_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1A OS=Arabidopsis thaliana GN=OST1A PE=2 SV=1
Length = 614
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 71/118 (60%), Gaps = 10/118 (8%)
Query: 56 IESFTSVMPTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHW-- 113
IES+T T + YGPY+N+ Y+ + I +H+E+ + F V +LVR+IEVSHW
Sbjct: 181 IESYTKFENTKLQGSELKYGPYKNLQSYSYSPIVVHFESKAAFAVAEKLVREIEVSHWGN 240
Query: 114 ----EHIHLKHDGAKLKGTFSRYDYQ-RDSAHGIKSFKTI---LPAAASDAYYRDEIG 163
E+ ++ H GA+LKG FSR D+Q R + G +F+ + LP A YYRD+IG
Sbjct: 241 VQVTENYNVVHRGAQLKGEFSRLDFQARPNPRGASAFRHLLARLPPRAHSIYYRDDIG 298
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 10 ITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGTLNI 56
+ YGPY+N+ Y+ + I +H+E+ + F V +LVR+IEVSHWG + +
Sbjct: 197 LKYGPYKNLQSYSYSPIVVHFESKAAFAVAEKLVREIEVSHWGNVQV 243
>sp|P41543|OST1_YEAST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=OST1 PE=1 SV=1
Length = 476
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 15/109 (13%)
Query: 70 QTITYGPYENVPPYTK-ANITIHYENNSPFLVVTRLVRQIEVSHW-------EHIHLKHD 121
+ +GP+E++P ++ + I Y +N+P V L R I +SHW E+ L +
Sbjct: 201 NSFEFGPWEDIPRFSSNETLAIVYSHNAPLNQVVNLRRDIWLSHWASTIQFEEYYELTNK 260
Query: 122 GAKLKGTFSRYDYQRD-------SAHGIKSFKTILPAAASDAYYRDEIG 163
AKL FSR + + H + +LP A+D Y+ D +G
Sbjct: 261 AAKLSKGFSRLELMKQIQTQNMRQTHFVTVLDMLLPEGATDHYFTDLVG 309
>sp|P27012|SCRY4_ENTDO S-crystallin 4 OS=Enteroctopus dofleini PE=2 SV=1
Length = 215
Score = 33.1 bits (74), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Query: 27 TIHYENNSPFLVVTRLV----------RQIEVSHWGTLNIESFTSVMPTTQVEQTITYGP 76
T+HY N+ + R++ R+IE S WG++ + S+MP +++ I
Sbjct: 5 TLHYFNHRGRAEICRMLFAAAGVQYNDRRIESSEWGSMRSKMPCSMMPMLELDNKIQIPQ 64
Query: 77 YENVPPYTKANITIHYENN 95
+ Y H +NN
Sbjct: 65 SMAMARYLAREFGFHGKNN 83
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,081,591
Number of Sequences: 539616
Number of extensions: 2491886
Number of successful extensions: 5255
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 5200
Number of HSP's gapped (non-prelim): 38
length of query: 169
length of database: 191,569,459
effective HSP length: 109
effective length of query: 60
effective length of database: 132,751,315
effective search space: 7965078900
effective search space used: 7965078900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)