BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6412
(181 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q69ZW3|EHBP1_MOUSE EH domain-binding protein 1 OS=Mus musculus GN=Ehbp1 PE=1 SV=3
Length = 1231
Score = 218 bits (556), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 101/165 (61%), Positives = 126/165 (76%)
Query: 1 MASVWKRLQRVNKRAAKFQFTASFHQLILESTSKWTPSKLSIVWTRRSRRVVTEPMLWEP 60
MASVWKRLQRV K A+KFQF AS+ +L++E T KW P KL +VWTRRSRR ++ W+P
Sbjct: 1 MASVWKRLQRVGKHASKFQFVASYQELMVECTKKWQPDKLVVVWTRRSRRKSSKAHSWQP 60
Query: 61 TMTDPLRGVVVWAVPENKTISVTLFKDPRNHELEDKEWTFIIEDISSGGKRRPLATAVLN 120
+ +P RGVVVW VPEN I+VTLFKDP E EDKEWTF+IE+ S G+R+ LAT+ +N
Sbjct: 61 GIKNPYRGVVVWPVPENIEITVTLFKDPHAEEFEDKEWTFVIENESPSGRRKALATSSIN 120
Query: 121 MNKYASVDSTQHQMNLEFKPCTKKIVSATLDLTLSCVFLREGKAT 165
M +YAS TQ + L+FKP +KK+VSATL +LSC+FLREGKAT
Sbjct: 121 MKQYASPMPTQTDVKLKFKPLSKKVVSATLQFSLSCIFLREGKAT 165
>sp|Q8NDI1|EHBP1_HUMAN EH domain-binding protein 1 OS=Homo sapiens GN=EHBP1 PE=1 SV=3
Length = 1231
Score = 217 bits (552), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/165 (60%), Positives = 125/165 (75%)
Query: 1 MASVWKRLQRVNKRAAKFQFTASFHQLILESTSKWTPSKLSIVWTRRSRRVVTEPMLWEP 60
MASVWKRLQRV K A+KFQF AS+ +L++E T KW P KL +VWTRRSRR ++ W+P
Sbjct: 1 MASVWKRLQRVGKHASKFQFVASYQELMVECTKKWQPDKLVVVWTRRSRRKSSKAHSWQP 60
Query: 61 TMTDPLRGVVVWAVPENKTISVTLFKDPRNHELEDKEWTFIIEDISSGGKRRPLATAVLN 120
+ +P RGVVVW VPEN I+VTLFKDP E EDKEWTF+IE+ S G+R+ LAT+ +N
Sbjct: 61 GIKNPYRGVVVWPVPENIEITVTLFKDPHAEEFEDKEWTFVIENESPSGRRKALATSSIN 120
Query: 121 MNKYASVDSTQHQMNLEFKPCTKKIVSATLDLTLSCVFLREGKAT 165
M +YAS TQ + L+FKP +KK+VSA L +LSC+FLREGKAT
Sbjct: 121 MKQYASPMPTQTDVKLKFKPLSKKVVSAALQFSLSCIFLREGKAT 165
>sp|Q99MS7|EH1L1_MOUSE EH domain-binding protein 1-like protein 1 OS=Mus musculus
GN=Ehbp1l1 PE=2 SV=1
Length = 1716
Score = 186 bits (472), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 115/165 (69%), Gaps = 1/165 (0%)
Query: 1 MASVWKRLQRVNKRAAKFQFTASFHQLILESTSKWTPSKLSIVWTRRSRRVVTEPMLWEP 60
M SVWKRLQRV KRAAKFQF A +H+L+LE T KW P KL +VWTRR+RR+ ++ W+P
Sbjct: 1 MTSVWKRLQRVGKRAAKFQFVACYHELVLECTKKWQPDKLVVVWTRRNRRICSKAHSWQP 60
Query: 61 TMTDPLRGVVVWAVPENKTISVTLFKDPRNHELEDKEWTFIIEDISSGGKRRPLATAVLN 120
+ +P RG VVW VPEN ISVTL++DP + E KEWTFIIE+ S G+R+ LAT +N
Sbjct: 61 GIQNPYRGTVVWMVPENVDISVTLYRDPHVDQYETKEWTFIIENESK-GQRKVLATVDVN 119
Query: 121 MNKYASVDSTQHQMNLEFKPCTKKIVSATLDLTLSCVFLREGKAT 165
+ +A Q + L KP + K+V A L LTLS V LREG+AT
Sbjct: 120 LAHHAGPVPAQVPLRLRLKPKSVKVVHAELSLTLSGVLLREGRAT 164
>sp|Q8N3D4|EH1L1_HUMAN EH domain-binding protein 1-like protein 1 OS=Homo sapiens
GN=EHBP1L1 PE=1 SV=2
Length = 1523
Score = 184 bits (468), Expect = 2e-46, Method: Composition-based stats.
Identities = 91/165 (55%), Positives = 117/165 (70%), Gaps = 1/165 (0%)
Query: 1 MASVWKRLQRVNKRAAKFQFTASFHQLILESTSKWTPSKLSIVWTRRSRRVVTEPMLWEP 60
M SVWKRLQRV KRAAKFQF A +H+L+LE T KW P KL +VWTRR+RR+ ++ W+P
Sbjct: 1 MTSVWKRLQRVGKRAAKFQFVACYHELVLECTKKWQPDKLVVVWTRRNRRICSKAHSWQP 60
Query: 61 TMTDPLRGVVVWAVPENKTISVTLFKDPRNHELEDKEWTFIIEDISSGGKRRPLATAVLN 120
+ +P RG VVW VPEN ISVTL++DP + E KEWTFIIE+ S G+R+ LATA ++
Sbjct: 61 GIQNPYRGTVVWMVPENVDISVTLYRDPHVDQYEAKEWTFIIEN-ESKGQRKVLATAEVD 119
Query: 121 MNKYASVDSTQHQMNLEFKPCTKKIVSATLDLTLSCVFLREGKAT 165
+ ++A Q + L KP + K+V A L LTLS V LREG+AT
Sbjct: 120 LARHAGPVPVQVPVRLRLKPKSVKVVQAELSLTLSGVLLREGRAT 164
>sp|B0C384|RSMG_ACAM1 Ribosomal RNA small subunit methyltransferase G OS=Acaryochloris
marina (strain MBIC 11017) GN=rsmG PE=3 SV=1
Length = 256
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 50 RVVTEPMLWEPTMTDPLRGVVVWAVPENKTISVTLFKDPRNHELEDKEWTFIIEDISSGG 109
R+ P WE + D L G+ W P++ F +H L+ + DI +GG
Sbjct: 47 RITDPPDFWEKHLWDSLVGIAPWLQPDSSIQRQVSFSVDHSHPLK-------VIDIGTGG 99
Query: 110 KRRPLATAVLNMN-KYASVDSTQHQM 134
L A++ + +DSTQ ++
Sbjct: 100 GFPGLPIAIIKPTWRITLLDSTQKKL 125
>sp|P24910|DNBI_SHV21 Major DNA-binding protein OS=Saimiriine herpesvirus 2 (strain 11)
GN=6 PE=3 SV=1
Length = 1128
Score = 31.2 bits (69), Expect = 3.8, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 99 TFIIEDISSGGKRRPLATAVLNMNKYASVD 128
T + EDI++ GK+RP+ T L +NKY ++
Sbjct: 897 TTLKEDIATVGKQRPIVTVPLVVNKYTGIN 926
>sp|Q58967|Y1572_METJA Putative ABC transporter ATP-binding protein MJ1572
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1572
PE=3 SV=1
Length = 278
Score = 30.8 bits (68), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 20/130 (15%)
Query: 44 WTRRSRRVVTEP--MLWEPTMTDPLRGVVVWAVPENKTISVT--LFKDPRNHELEDKEWT 99
+ R+ V P ML+ PT+ D + + + K I VT KD + + L+D+
Sbjct: 83 FRRKVGFVFQNPDVMLFNPTVWDEVAFSPLHLYSKEKAIEVTDKTLKDMKIYHLKDRHPY 142
Query: 100 FIIEDISSGGKRRPLATAVLN-------MNKYASV---DSTQHQMNL--EFKPCTKKIVS 147
++S G K++ + +L+ M++ S S MNL FK C K +V
Sbjct: 143 ----NLSGGEKKKVSISCILSVEPEVILMDEPTSALDPKSRAEIMNLIKSFKECGKTVVL 198
Query: 148 ATLDLTLSCV 157
T DL L+C+
Sbjct: 199 VTHDLNLACL 208
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.129 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,653,436
Number of Sequences: 539616
Number of extensions: 2255190
Number of successful extensions: 4885
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 4876
Number of HSP's gapped (non-prelim): 10
length of query: 181
length of database: 191,569,459
effective HSP length: 110
effective length of query: 71
effective length of database: 132,211,699
effective search space: 9387030629
effective search space used: 9387030629
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)