BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6415
(174 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A4QNE6|WDR92_XENTR WD repeat-containing protein 92 OS=Xenopus tropicalis GN=wdr92 PE=2
SV=1
Length = 358
Score = 213 bits (541), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 130/174 (74%), Gaps = 19/174 (10%)
Query: 1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
+V AGYDNGD+K+FDL+ MS++WETN+KNGVC ++FDR+DI MNKLVAT+LE K VFD+
Sbjct: 183 LVCAGYDNGDIKLFDLRNMSVRWETNIKNGVCSLEFDRKDIVMNKLVATSLEGKFHVFDM 242
Query: 61 KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLC 120
+T H KGFA +SEKAHK +T+W +HLPQNRD+F+T GG+G+L+LW+
Sbjct: 243 RTQHPSKGFASMSEKAHK-STIWQVRHLPQNRDVFMTSGGAGNLHLWKY----------- 290
Query: 121 SIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
YP QR++ D DD+ MGV GS++LLQ TLS+QPI+S+DWS DK GL
Sbjct: 291 -------EYPAQRSRKDSDDVDMGVAGSVSLLQNVTLSTQPISSMDWSPDKKGL 337
>sp|Q561Y0|WDR92_DANRE WD repeat-containing protein 92 OS=Danio rerio GN=wdr92 PE=2 SV=1
Length = 358
Score = 212 bits (539), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/173 (57%), Positives = 126/173 (72%), Gaps = 19/173 (10%)
Query: 2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK 61
V AGYDNGD+K+FDL+ MSL+WE N++NGVC V+FDR+DI MNKLVAT+LE K VFD++
Sbjct: 184 VCAGYDNGDIKLFDLRNMSLRWEKNIRNGVCSVEFDRKDINMNKLVATSLEGKFHVFDMR 243
Query: 62 TLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCS 121
T H KGFA +SEKAHK +T+W +HLPQNRD+F+T GG+G+L+LW+
Sbjct: 244 TQHPSKGFASVSEKAHK-STIWQVRHLPQNRDVFMTAGGAGNLHLWKY------------ 290
Query: 122 IFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
YP QR+K DD+ MGV GS+ LLQ TLS+QPI+SLDWS DK GL
Sbjct: 291 ------EYPAQRSKKGADDVEMGVAGSVNLLQNVTLSTQPISSLDWSPDKQGL 337
>sp|Q29RZ9|WDR92_BOVIN WD repeat-containing protein 92 OS=Bos taurus GN=WDR92 PE=2 SV=1
Length = 357
Score = 212 bits (539), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 129/174 (74%), Gaps = 19/174 (10%)
Query: 1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
+V AGYDNGD+K+FDL+ MSL+WETN+KNGVC ++FDR+DI MNKLVAT+LE K VFD+
Sbjct: 182 VVCAGYDNGDIKLFDLRNMSLRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241
Query: 61 KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLC 120
+T H KGFA +SEKAHK +TVW +HLPQNR++F+T GG+GSL+LW+
Sbjct: 242 RTQHPTKGFASVSEKAHK-STVWQVRHLPQNREVFLTAGGAGSLHLWKY----------- 289
Query: 121 SIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
YP QR+K D + + MGV GS++LLQ TLS+QP++SLDWS DK GL
Sbjct: 290 -------EYPIQRSKKDSEGVEMGVAGSVSLLQNVTLSTQPVSSLDWSPDKRGL 336
>sp|Q8BGF3|WDR92_MOUSE WD repeat-containing protein 92 OS=Mus musculus GN=Wdr92 PE=2 SV=1
Length = 357
Score = 212 bits (539), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 130/174 (74%), Gaps = 19/174 (10%)
Query: 1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
+V AGYDNGD+K+FDL+ MSL+WETN+KNGVC ++FDR+DI MNKLVAT+LE K VFD+
Sbjct: 182 VVCAGYDNGDIKLFDLRNMSLRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241
Query: 61 KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLC 120
+T H KGFA ++EKAHK +TVW +HLPQNR++F+T GG+GSL+LW+
Sbjct: 242 RTQHPTKGFASVTEKAHK-STVWQVRHLPQNREIFLTTGGAGSLHLWKY----------- 289
Query: 121 SIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
YPTQR+K D + + MGV GS++LLQ T+S+QPI+SLDWS DK GL
Sbjct: 290 -------EYPTQRSKKDSEGLEMGVAGSVSLLQNVTVSTQPISSLDWSPDKRGL 336
>sp|Q96MX6|WDR92_HUMAN WD repeat-containing protein 92 OS=Homo sapiens GN=WDR92 PE=1 SV=1
Length = 357
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 128/174 (73%), Gaps = 19/174 (10%)
Query: 1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
+V AGYDNGD+K+FDL+ M+L+WETN+KNGVC ++FDR+DI MNKLVAT+LE K VFD+
Sbjct: 182 VVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241
Query: 61 KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLC 120
+T H KGFA +SEKAHK +TVW +HLPQNR+LF+T GG+G L+LW+
Sbjct: 242 RTQHPTKGFASVSEKAHK-STVWQVRHLPQNRELFLTAGGAGGLHLWKY----------- 289
Query: 121 SIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
YP QR+K D + I MGV GS++LLQ TLS+QPI+SLDWS DK GL
Sbjct: 290 -------EYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGL 336
>sp|Q5M7F6|WDR92_XENLA WD repeat-containing protein 92 OS=Xenopus laevis GN=wdr92 PE=2
SV=1
Length = 358
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 126/173 (72%), Gaps = 19/173 (10%)
Query: 2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK 61
V AGYDNGD+K+FDL+ MS++WETN+KNGVC ++FDR+DI MNKLVAT+LE K VFD++
Sbjct: 184 VCAGYDNGDIKLFDLRNMSVRWETNIKNGVCSLEFDRKDIVMNKLVATSLEGKFHVFDMR 243
Query: 62 TLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCS 121
T H KGFA +SEKAHK +TVW +HLPQNRD+F+T GG+G+L+LW+
Sbjct: 244 TQHPTKGFASVSEKAHK-STVWQVRHLPQNRDVFMTSGGAGNLHLWKY------------ 290
Query: 122 IFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
YP QR++ D D + GV GS +LLQ TLS+QPI+SLDWS DK GL
Sbjct: 291 ------EYPAQRSRKDSDGVDTGVAGSASLLQNVTLSTQPISSLDWSPDKKGL 337
>sp|Q54E33|WDR92_DICDI WD repeat-containing protein 92 homolog OS=Dictyostelium discoideum
GN=wdr92 PE=4 SV=1
Length = 357
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK 61
++AG++NGDL +++LKT S++ T L G+C +D + R +N+ + TT ++ + +
Sbjct: 201 IIAGFENGDLNIYNLKTNSIQSTTKLNGGICSIDSNDRSNILNQFLITTNKSFISIASFN 260
Query: 62 TLHREK-GFAYLSEKAHKATTVWAAKHLP----QNRDLFVTCGGSGSLNLWQ 108
+ F T+W+ + P N ++F G GS+++++
Sbjct: 261 NNNNNNIEFKDYDINKEPNQTIWSGIYSPWNKKDNENIFTIAQGDGSVSMYR 312
>sp|Q49YU2|DAGK_STAS1 Diacylglycerol kinase OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=dagK
PE=3 SV=1
Length = 305
Score = 37.0 bits (84), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 19/75 (25%)
Query: 70 AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNY 129
AY +EK ATT AA+ L QN D+ + GG G+LN ++++ + N
Sbjct: 38 AYATEKVGDATT-EAARSLEQNYDVLIAAGGDGTLN--EVINGIAEKPN----------- 83
Query: 130 PTQRTKPDIDDIPMG 144
+P + IPMG
Sbjct: 84 -----RPSLGIIPMG 93
>sp|Q12523|YP247_YEAST WD repeat-containing protein YPL247C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YPL247C PE=1 SV=1
Length = 523
Score = 36.2 bits (82), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 36 FDRRDIPMNKLVATTLEAKLFVFDLKTLHREKG--FAYLSEKAHKATTVWAAKHLPQNRD 93
FD + N +++++++ V+DL++ H K A+ SE V+ + L ++
Sbjct: 249 FDWNTVDTNLIISSSIDTTCIVWDLQSSHYVKTQLIAHDSE-------VFDVRFLTKSTQ 301
Query: 94 LFVTCGGSGSLNLWQLVS 111
LF +CGG GS+ ++ L S
Sbjct: 302 LFASCGGDGSVRVFDLRS 319
>sp|Q4PCB8|SEC13_USTMA Protein transport protein SEC13 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=SEC13 PE=3 SV=1
Length = 364
Score = 33.9 bits (76), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 31/143 (21%)
Query: 40 DIPMNKLVATTLEAKLFVFDL---------KTLHREKGFAYLSEKAHKATTVWAAKHLPQ 90
D +L + + + VFD+ +TLH +G + AH P
Sbjct: 35 DFYGKRLATCSSDRTVKVFDIVNGTPSTTAETLHGHQGPVWQVAWAH-----------PT 83
Query: 91 NRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLT 150
D+ +C G + +W+ D + S+ Y +Q P G T
Sbjct: 84 FGDILASCSYDGKVVIWK-------DNGAGASIGASAPYGSQSAY----GAPTSSAGGWT 132
Query: 151 LLQEATLSSQPINSLDWSADKLG 173
++E TL + +NS+ W+ +LG
Sbjct: 133 KIKEHTLHTASVNSISWAPHELG 155
>sp|O00116|ADAS_HUMAN Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Homo
sapiens GN=AGPS PE=1 SV=1
Length = 658
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 11/111 (9%)
Query: 62 TLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGG------SG-SLNLWQLVSALR 114
T H E G + + + H P + + F T GG SG N++ + L
Sbjct: 275 TAHVEAGITGQELERQLKESGYCTGHEPDSLE-FSTVGGWVSTRASGMKKNIYGNIEDLV 333
Query: 115 ADTNLCS---IFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPI 162
+ + I S P T PDI MG G+L ++ EAT+ +P+
Sbjct: 334 VHIKMVTPRGIIEKSCQGPRMSTGPDIHHFIMGSEGTLGVITEATIKIRPV 384
>sp|Q45726|BLAC_BACTU Beta-lactamase OS=Bacillus thuringiensis GN=bla PE=3 SV=1
Length = 309
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 5 GYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEA 53
GY+ KM D TMS ++ET L + G D RD K +AT L+A
Sbjct: 167 GYEKALRKMGDRVTMSDRFETELNEAIPG---DIRDTSTAKRIATNLKA 212
>sp|Q8C0I1|ADAS_MOUSE Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Mus
musculus GN=Agps PE=1 SV=1
Length = 645
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 122 IFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQP 161
+ SS P T PDI MG G+L ++ EAT+ +P
Sbjct: 331 VIEKSSQGPRMSTGPDIHHFIMGSEGTLGVITEATIKIRP 370
>sp|Q9EQR2|ADAS_RAT Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Rattus
norvegicus GN=Agps PE=2 SV=1
Length = 644
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 122 IFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQP 161
+ SS P T PDI MG G+L ++ EAT+ +P
Sbjct: 330 VIEKSSQGPRMSTGPDIHHFIMGSEGTLGVITEATIKIRP 369
>sp|A8G7D1|SAHH_PROM2 Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9215)
GN=ahcY PE=3 SV=1
Length = 472
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 74 EKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSS------ 127
+ A + +V + + ++ D+FVT G+ + + + ++ + +C+I + +
Sbjct: 293 QAAMEGYSVVRLEDVVEDIDIFVTATGNYQVITKENLVKMKNEAIVCNIGHFDNEIDVAS 352
Query: 128 --NYPTQRTKPDIDDIPMGVPGSLTLLQEATL 157
NYP + KP +D I + + LL E L
Sbjct: 353 LKNYPWENIKPQVDHITLPSGNKIILLAEGRL 384
>sp|O16519|GAD1_CAEEL Gastrulation defective protein 1 OS=Caenorhabditis elegans GN=gad-1
PE=1 SV=1
Length = 620
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109
K H AT V + P N++ F++C GSL LW L
Sbjct: 221 KGHTAT-VNCVEFNPLNKNEFISCSDDGSLRLWNL 254
>sp|Q9DC48|PRP17_MOUSE Pre-mRNA-processing factor 17 OS=Mus musculus GN=Cdc40 PE=1 SV=1
Length = 579
Score = 30.4 bits (67), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 9/77 (11%)
Query: 31 VCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQ 90
C VDF M+ +++ KL ++D KT F KAH + A H P
Sbjct: 511 ACQVDFSPD---MSYVISGDGNGKLNIWDWKTTKLYSRF-----KAHDKVCIGAVWH-PH 561
Query: 91 NRDLFVTCGGSGSLNLW 107
+TCG G + LW
Sbjct: 562 ETSKVITCGWDGLIKLW 578
>sp|O60508|PRP17_HUMAN Pre-mRNA-processing factor 17 OS=Homo sapiens GN=CDC40 PE=1 SV=1
Length = 579
Score = 30.4 bits (67), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 9/77 (11%)
Query: 31 VCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQ 90
C VDF M+ +++ KL ++D KT F KAH + A H P
Sbjct: 511 ACQVDFSPD---MSYVISGDGNGKLNIWDWKTTKLYSRF-----KAHDKVCIGAVWH-PH 561
Query: 91 NRDLFVTCGGSGSLNLW 107
+TCG G + LW
Sbjct: 562 ETSKVITCGWDGLIKLW 578
>sp|P30015|LHR_ECOLI Probable ATP-dependent helicase lhr OS=Escherichia coli (strain K12)
GN=lhr PE=3 SV=2
Length = 1538
Score = 30.0 bits (66), Expect = 7.0, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 94 LFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQR-TKPDIDDIPMGVPGSLTLL 152
L++ GG L +WQ L A ++ P R T +++D+P+ TLL
Sbjct: 1465 LYLAQGGKKML-VWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLL 1523
Query: 153 QEATLSSQPINSLDW 167
+EA SS P LDW
Sbjct: 1524 REAGFSSSP-QGLDW 1537
>sp|O74763|YBE8_SCHPO Uncharacterized WD repeat-containing protein C17D11.08
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC17D11.08 PE=1 SV=1
Length = 435
Score = 29.6 bits (65), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 65 REKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109
R G AY + + HK V A K +P ++ TCG ++LW L
Sbjct: 302 RVPGTAYATLRGHKGD-VNAVKWMPGSKSKLATCGDDCVVSLWDL 345
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,047,481
Number of Sequences: 539616
Number of extensions: 2502981
Number of successful extensions: 5107
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 5080
Number of HSP's gapped (non-prelim): 28
length of query: 174
length of database: 191,569,459
effective HSP length: 109
effective length of query: 65
effective length of database: 132,751,315
effective search space: 8628835475
effective search space used: 8628835475
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)