Query psy6415
Match_columns 174
No_of_seqs 235 out of 1339
Neff 8.3
Searched_HMMs 29240
Date Fri Aug 16 17:26:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6415.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6415hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 99.9 8.9E-26 3E-30 184.4 18.8 162 2-173 96-271 (344)
2 4gqb_B Methylosome protein 50; 99.9 2.2E-25 7.6E-30 182.1 16.4 127 1-173 184-313 (344)
3 2ynn_A Coatomer subunit beta'; 99.9 1.6E-24 5.4E-29 172.8 19.6 164 1-173 69-242 (304)
4 3ow8_A WD repeat-containing pr 99.9 1.4E-24 4.7E-29 175.1 16.6 126 1-173 178-304 (321)
5 1got_B GT-beta; complex (GTP-b 99.9 4.8E-24 1.6E-28 172.5 18.9 162 2-174 157-327 (340)
6 3i2n_A WD repeat-containing pr 99.9 3.7E-24 1.3E-28 170.9 16.9 155 1-174 182-336 (357)
7 2pbi_B Guanine nucleotide-bind 99.9 1E-23 3.5E-28 171.9 19.5 164 2-174 169-341 (354)
8 2ynn_A Coatomer subunit beta'; 99.9 1E-23 3.5E-28 168.1 16.4 125 1-171 27-152 (304)
9 2xzm_R RACK1; ribosome, transl 99.9 1.7E-23 5.7E-28 169.3 17.0 162 1-173 41-227 (343)
10 3iz6_a 40S ribosomal protein R 99.9 2.7E-23 9.2E-28 170.6 17.6 164 1-173 172-358 (380)
11 4g56_B MGC81050 protein; prote 99.9 1.1E-23 3.6E-28 172.2 14.3 126 1-172 196-325 (357)
12 2hes_X YDR267CP; beta-propelle 99.9 4.2E-23 1.4E-27 166.4 17.5 135 1-173 26-167 (330)
13 3fm0_A Protein CIAO1; WDR39,SG 99.9 3.1E-23 1.1E-27 168.2 16.6 131 1-173 30-164 (345)
14 1vyh_C Platelet-activating fac 99.9 2.1E-23 7.3E-28 173.1 15.4 125 1-172 122-247 (410)
15 3frx_A Guanine nucleotide-bind 99.9 6.6E-23 2.3E-27 164.6 17.4 126 1-173 79-210 (319)
16 2pm7_B Protein transport prote 99.9 8.9E-23 3.1E-27 162.1 17.1 133 1-171 69-216 (297)
17 4g56_B MGC81050 protein; prote 99.9 8.3E-23 2.8E-27 166.9 17.1 130 1-173 153-283 (357)
18 3ow8_A WD repeat-containing pr 99.9 8E-23 2.7E-27 164.7 16.8 126 1-173 136-262 (321)
19 2hes_X YDR267CP; beta-propelle 99.9 2E-22 6.9E-27 162.4 18.6 131 1-172 72-210 (330)
20 1vyh_C Platelet-activating fac 99.9 1.3E-22 4.3E-27 168.4 17.3 129 1-173 248-394 (410)
21 4h5i_A Guanine nucleotide-exch 99.9 5.3E-23 1.8E-27 168.6 14.2 130 2-174 150-327 (365)
22 3fm0_A Protein CIAO1; WDR39,SG 99.9 1.3E-22 4.4E-27 164.5 16.2 131 1-173 75-208 (345)
23 2j04_B YDR362CP, TAU91; beta p 99.9 8.8E-23 3E-27 176.0 16.0 164 1-174 227-412 (524)
24 4ery_A WD repeat-containing pr 99.9 3.1E-22 1.1E-26 158.9 17.3 126 1-173 37-163 (312)
25 2ymu_A WD-40 repeat protein; u 99.9 2.4E-22 8.2E-27 171.0 16.9 125 1-174 440-564 (577)
26 2xzm_R RACK1; ribosome, transl 99.9 4.4E-22 1.5E-26 160.9 17.6 104 1-109 90-242 (343)
27 4e54_B DNA damage-binding prot 99.9 1.2E-22 4.1E-27 169.2 14.5 128 1-173 134-264 (435)
28 2pm7_B Protein transport prote 99.9 5.4E-22 1.9E-26 157.6 16.5 140 1-174 115-269 (297)
29 3f3f_A Nucleoporin SEH1; struc 99.9 7.5E-22 2.6E-26 155.5 17.2 170 1-173 73-320 (351)
30 1erj_A Transcriptional repress 99.9 5.4E-22 1.8E-26 163.5 16.7 133 1-173 137-270 (393)
31 1nr0_A Actin interacting prote 99.9 6E-22 2.1E-26 172.1 17.8 167 2-173 163-338 (611)
32 2pbi_B Guanine nucleotide-bind 99.9 7.5E-22 2.6E-26 160.9 17.3 127 1-173 78-254 (354)
33 3frx_A Guanine nucleotide-bind 99.9 4.3E-22 1.5E-26 159.8 15.4 123 1-171 32-160 (319)
34 2j04_B YDR362CP, TAU91; beta p 99.9 4.1E-23 1.4E-27 178.0 9.6 162 1-172 325-496 (524)
35 3iz6_a 40S ribosomal protein R 99.9 3.2E-22 1.1E-26 164.2 14.2 136 1-173 80-263 (380)
36 4ery_A WD repeat-containing pr 99.9 4.1E-21 1.4E-25 152.3 18.7 164 1-173 121-293 (312)
37 2w18_A PALB2, fancn, partner a 99.9 5.8E-22 2E-26 162.9 13.4 130 1-174 195-341 (356)
38 3dm0_A Maltose-binding peripla 99.9 1.5E-21 5.2E-26 171.3 16.9 162 1-173 397-575 (694)
39 2xyi_A Probable histone-bindin 99.9 2.5E-21 8.7E-26 161.2 17.2 143 1-173 246-392 (430)
40 1got_B GT-beta; complex (GTP-b 99.9 2.9E-21 9.8E-26 156.1 16.8 125 1-173 111-240 (340)
41 4e54_B DNA damage-binding prot 99.9 7.2E-22 2.5E-26 164.5 13.1 129 1-173 179-310 (435)
42 1nr0_A Actin interacting prote 99.9 3.7E-21 1.3E-25 167.1 18.0 129 1-171 204-379 (611)
43 4gq1_A NUP37; propeller, trans 99.9 8.7E-22 3E-26 162.6 13.4 170 1-174 158-374 (393)
44 3bg1_A Protein SEC13 homolog; 99.9 1.3E-21 4.4E-26 156.8 13.9 132 1-171 27-162 (316)
45 2ymu_A WD-40 repeat protein; u 99.9 6.6E-21 2.3E-25 162.2 17.9 125 1-174 399-523 (577)
46 3bg1_A Protein SEC13 homolog; 99.9 7.9E-22 2.7E-26 158.1 11.4 133 1-171 73-224 (316)
47 3mmy_A MRNA export factor; mRN 99.9 4.9E-21 1.7E-25 152.8 16.0 61 1-64 100-162 (368)
48 1erj_A Transcriptional repress 99.9 6.6E-21 2.3E-25 156.9 17.2 128 1-170 221-363 (393)
49 3dwl_C Actin-related protein 2 99.9 2.1E-21 7.1E-26 157.2 13.8 146 1-173 69-219 (377)
50 3dwl_C Actin-related protein 2 99.9 1.4E-21 4.9E-26 158.1 11.8 134 1-173 114-265 (377)
51 3lrv_A PRE-mRNA-splicing facto 99.9 8.4E-21 2.9E-25 153.2 15.9 126 2-173 88-228 (343)
52 3vl1_A 26S proteasome regulato 99.9 4.4E-21 1.5E-25 157.1 14.4 99 1-109 111-210 (420)
53 4gq1_A NUP37; propeller, trans 99.9 1.4E-21 4.8E-26 161.3 11.3 104 1-110 103-217 (393)
54 3lrv_A PRE-mRNA-splicing facto 99.9 6E-21 2E-25 154.0 14.6 99 1-109 141-242 (343)
55 2oaj_A Protein SNI1; WD40 repe 99.9 3.6E-21 1.2E-25 174.9 13.6 133 1-171 449-639 (902)
56 2pm9_A Protein WEB1, protein t 99.9 1.1E-20 3.9E-25 154.0 15.2 128 1-172 180-318 (416)
57 3ei3_B DNA damage-binding prot 99.9 1.8E-20 6.3E-25 152.3 16.1 127 1-172 88-217 (383)
58 2aq5_A Coronin-1A; WD40 repeat 99.9 7.9E-21 2.7E-25 156.0 14.0 132 2-173 50-190 (402)
59 3f3f_A Nucleoporin SEH1; struc 99.9 5E-20 1.7E-24 145.0 17.9 109 1-111 25-143 (351)
60 3ei3_B DNA damage-binding prot 99.8 4E-20 1.4E-24 150.3 17.1 129 1-173 133-265 (383)
61 4aow_A Guanine nucleotide-bind 99.8 1.5E-20 5.2E-25 149.1 14.2 132 2-173 188-320 (340)
62 3jrp_A Fusion protein of prote 99.8 2.7E-20 9.4E-25 149.2 15.7 132 1-170 71-217 (379)
63 2aq5_A Coronin-1A; WD40 repeat 99.8 2.3E-20 7.9E-25 153.2 15.4 126 1-172 96-233 (402)
64 2xyi_A Probable histone-bindin 99.8 5.5E-20 1.9E-24 153.1 17.4 132 1-173 196-335 (430)
65 3jrp_A Fusion protein of prote 99.8 7.3E-20 2.5E-24 146.8 17.1 139 1-173 117-270 (379)
66 3vu4_A KMHSV2; beta-propeller 99.8 6.8E-20 2.3E-24 149.3 16.7 133 2-173 74-254 (355)
67 1sq9_A Antiviral protein SKI8; 99.8 5.9E-20 2E-24 149.1 16.3 99 1-109 199-320 (397)
68 3k26_A Polycomb protein EED; W 99.8 3.9E-20 1.3E-24 147.7 14.8 128 2-172 37-174 (366)
69 2oaj_A Protein SNI1; WD40 repe 99.8 1.9E-20 6.4E-25 170.2 14.4 103 1-109 71-180 (902)
70 4aez_A CDC20, WD repeat-contai 99.8 1.2E-19 4.2E-24 149.2 17.9 125 1-173 148-273 (401)
71 4aez_A CDC20, WD repeat-contai 99.8 9.7E-20 3.3E-24 149.8 17.1 163 1-173 188-363 (401)
72 3gre_A Serine/threonine-protei 99.8 1.8E-20 6.1E-25 154.9 12.6 100 1-109 184-290 (437)
73 3v7d_B Cell division control p 99.8 9.9E-20 3.4E-24 151.5 16.8 163 1-173 134-324 (464)
74 3vl1_A 26S proteasome regulato 99.8 2.1E-20 7.3E-25 153.0 12.6 126 1-173 70-195 (420)
75 1gxr_A ESG1, transducin-like e 99.8 2.5E-19 8.4E-24 141.5 17.6 162 1-173 111-279 (337)
76 3dw8_B Serine/threonine-protei 99.8 2.3E-20 7.9E-25 153.7 12.1 103 2-109 110-256 (447)
77 1pgu_A Actin interacting prote 99.8 4.4E-20 1.5E-24 157.2 13.9 127 1-172 458-597 (615)
78 4a11_B DNA excision repair pro 99.8 2.7E-19 9.3E-24 144.8 17.6 146 1-173 114-259 (408)
79 4a11_B DNA excision repair pro 99.8 3E-19 1E-23 144.5 17.6 168 1-173 158-348 (408)
80 1k8k_C P40, ARP2/3 complex 41 99.8 1.3E-19 4.3E-24 145.5 15.0 130 1-172 110-257 (372)
81 3sfz_A APAF-1, apoptotic pepti 99.8 2E-19 7E-24 165.8 18.1 126 1-172 629-756 (1249)
82 3k26_A Polycomb protein EED; W 99.8 1.6E-19 5.6E-24 144.1 14.9 153 1-169 87-241 (366)
83 3vu4_A KMHSV2; beta-propeller 99.8 1.5E-19 5.1E-24 147.3 14.7 95 5-109 155-269 (355)
84 4aow_A Guanine nucleotide-bind 99.8 8.2E-19 2.8E-23 139.1 18.1 163 1-173 53-229 (340)
85 1gxr_A ESG1, transducin-like e 99.8 6.2E-19 2.1E-23 139.2 17.2 124 1-173 197-320 (337)
86 3odt_A Protein DOA1; ubiquitin 99.8 2E-19 6.7E-24 140.9 14.2 123 1-172 157-279 (313)
87 3mmy_A MRNA export factor; mRN 99.8 2.7E-19 9.3E-24 142.6 15.2 100 1-111 56-160 (368)
88 2pm9_A Protein WEB1, protein t 99.8 1.5E-19 5E-24 147.4 13.7 106 1-109 81-195 (416)
89 1k8k_C P40, ARP2/3 complex 41 99.8 3.1E-19 1.1E-23 143.2 15.3 147 1-172 66-215 (372)
90 1r5m_A SIR4-interacting protei 99.8 3.3E-19 1.1E-23 144.7 15.4 145 1-173 261-408 (425)
91 3dm0_A Maltose-binding peripla 99.8 4E-19 1.4E-23 155.9 16.8 126 1-172 486-615 (694)
92 4gga_A P55CDC, cell division c 99.8 1.1E-18 3.7E-23 144.5 18.4 142 27-174 229-379 (420)
93 3zwl_B Eukaryotic translation 99.8 7.7E-19 2.6E-23 140.0 16.0 162 1-173 46-232 (369)
94 4ggc_A P55CDC, cell division c 99.8 2.1E-18 7.1E-23 135.6 18.2 102 2-109 39-179 (318)
95 3mkq_A Coatomer beta'-subunit; 99.8 3.5E-19 1.2E-23 157.1 14.8 125 1-171 27-153 (814)
96 4h5i_A Guanine nucleotide-exch 99.8 4.1E-19 1.4E-23 145.4 13.0 99 2-109 234-341 (365)
97 4ggc_A P55CDC, cell division c 99.8 1.1E-18 3.6E-23 137.3 14.9 128 1-174 164-299 (318)
98 1yfq_A Cell cycle arrest prote 99.8 6.3E-19 2.2E-23 140.1 13.7 97 1-109 25-129 (342)
99 3zwl_B Eukaryotic translation 99.8 2E-18 6.7E-23 137.7 16.6 125 1-173 189-329 (369)
100 3mkq_A Coatomer beta'-subunit; 99.8 2.2E-18 7.6E-23 152.0 18.1 161 1-172 69-241 (814)
101 4gga_A P55CDC, cell division c 99.8 2.9E-18 9.8E-23 142.0 17.6 122 2-172 119-243 (420)
102 1r5m_A SIR4-interacting protei 99.8 1.4E-18 4.9E-23 141.0 15.4 124 2-173 220-344 (425)
103 3gre_A Serine/threonine-protei 99.8 6.7E-19 2.3E-23 145.4 13.5 131 1-173 78-228 (437)
104 3dw8_B Serine/threonine-protei 99.8 7.1E-19 2.4E-23 144.8 13.4 138 1-171 42-238 (447)
105 2vdu_B TRNA (guanine-N(7)-)-me 99.8 1.4E-18 4.7E-23 145.1 15.0 129 2-173 118-254 (450)
106 3jro_A Fusion protein of prote 99.8 1.3E-18 4.3E-23 154.9 14.3 132 1-170 69-215 (753)
107 1sq9_A Antiviral protein SKI8; 99.8 1.6E-18 5.3E-23 140.7 13.6 130 1-173 83-247 (397)
108 3i2n_A WD repeat-containing pr 99.8 2E-18 6.9E-23 137.5 13.9 130 1-172 131-272 (357)
109 2j04_A TAU60, YPL007P, hypothe 99.8 2.4E-18 8.1E-23 149.3 14.9 102 1-111 99-211 (588)
110 3v7d_B Cell division control p 99.8 1.1E-17 3.9E-22 139.0 17.7 97 1-109 219-339 (464)
111 3jro_A Fusion protein of prote 99.8 3.6E-18 1.2E-22 152.0 15.3 139 1-173 115-268 (753)
112 3sfz_A APAF-1, apoptotic pepti 99.8 1E-18 3.5E-23 161.1 11.4 98 2-109 1058-1156(1249)
113 1yfq_A Cell cycle arrest prote 99.8 7.2E-18 2.5E-22 134.0 14.7 123 2-173 163-306 (342)
114 1p22_A F-BOX/WD-repeat protein 99.8 1.2E-17 4.1E-22 138.7 16.0 126 1-168 268-394 (435)
115 3odt_A Protein DOA1; ubiquitin 99.8 1.2E-17 4E-22 130.8 15.1 123 1-171 31-155 (313)
116 2ovr_B FBW7, F-BOX/WD repeat p 99.8 1.7E-17 5.9E-22 137.7 16.6 124 1-172 291-420 (445)
117 2ovr_B FBW7, F-BOX/WD repeat p 99.8 2.4E-17 8.2E-22 136.9 17.2 156 1-172 131-290 (445)
118 1p22_A F-BOX/WD-repeat protein 99.8 3.4E-17 1.2E-21 135.9 17.2 157 1-168 185-345 (435)
119 2vdu_B TRNA (guanine-N(7)-)-me 99.8 9.1E-18 3.1E-22 140.1 13.6 102 1-109 163-269 (450)
120 2oit_A Nucleoporin 214KDA; NH2 99.8 1.2E-18 4.1E-23 146.5 7.9 97 4-109 113-221 (434)
121 1pgu_A Actin interacting prote 99.8 8.9E-18 3.1E-22 143.0 13.4 124 1-172 80-220 (615)
122 1l0q_A Surface layer protein; 99.7 2.6E-17 8.8E-22 133.6 14.7 99 1-109 4-103 (391)
123 2j04_A TAU60, YPL007P, hypothe 99.7 3.8E-18 1.3E-22 148.0 9.9 101 27-171 84-194 (588)
124 2oit_A Nucleoporin 214KDA; NH2 99.7 8.8E-18 3E-22 141.2 11.8 131 2-174 51-207 (434)
125 2w18_A PALB2, fancn, partner a 99.7 1.2E-17 4.2E-22 137.2 12.0 96 2-109 253-355 (356)
126 1l0q_A Surface layer protein; 99.7 4.8E-16 1.6E-20 126.1 14.9 98 2-109 47-145 (391)
127 3bws_A Protein LP49; two-domai 99.7 9.5E-16 3.2E-20 125.9 12.5 100 1-109 136-241 (433)
128 2hqs_A Protein TOLB; TOLB, PAL 99.7 5.2E-15 1.8E-19 123.1 16.6 117 9-173 159-280 (415)
129 3bws_A Protein LP49; two-domai 99.6 1.9E-15 6.4E-20 124.2 13.7 124 2-173 227-358 (433)
130 2hqs_A Protein TOLB; TOLB, PAL 99.6 8.4E-14 2.9E-18 115.8 17.0 97 2-109 193-298 (415)
131 1nir_A Nitrite reductase; hemo 99.5 2.9E-13 9.9E-18 116.8 15.7 98 1-109 151-255 (543)
132 2ojh_A Uncharacterized protein 99.5 4.6E-13 1.6E-17 103.0 12.8 127 3-173 145-285 (297)
133 1pby_B Quinohemoprotein amine 99.5 3.4E-13 1.2E-17 106.2 11.6 105 1-110 3-123 (337)
134 2ojh_A Uncharacterized protein 99.5 3.7E-13 1.3E-17 103.5 11.2 95 4-109 17-115 (297)
135 1z68_A Fibroblast activation p 99.4 1.5E-13 5.3E-18 120.4 8.7 95 3-109 30-137 (719)
136 1xfd_A DIP, dipeptidyl aminope 99.4 1.2E-13 4.1E-18 120.7 7.6 95 6-109 34-141 (723)
137 1nir_A Nitrite reductase; hemo 99.4 2.3E-12 7.7E-17 111.2 15.0 106 1-109 192-309 (543)
138 3u4y_A Uncharacterized protein 99.4 4.2E-12 1.4E-16 100.5 15.4 98 2-109 13-115 (331)
139 2ecf_A Dipeptidyl peptidase IV 99.4 2E-12 6.7E-17 113.4 13.6 95 2-109 51-179 (741)
140 1jmx_B Amine dehydrogenase; ox 99.4 1.4E-12 4.7E-17 103.4 11.1 100 1-109 13-132 (349)
141 1k32_A Tricorn protease; prote 99.4 2.5E-12 8.5E-17 117.9 14.0 98 2-109 351-459 (1045)
142 3u4y_A Uncharacterized protein 99.4 9.8E-12 3.3E-16 98.4 15.6 103 2-109 98-205 (331)
143 1ri6_A Putative isomerase YBHE 99.4 2E-12 6.8E-17 102.1 11.3 100 2-109 8-113 (343)
144 1ri6_A Putative isomerase YBHE 99.4 1.4E-11 4.9E-16 97.1 16.2 104 2-109 143-260 (343)
145 3o4h_A Acylamino-acid-releasin 99.4 1.2E-12 4.2E-17 112.3 9.9 94 2-109 126-225 (582)
146 3scy_A Hypothetical bacterial 99.4 1.5E-11 5E-16 99.1 15.3 104 2-109 170-289 (361)
147 4a5s_A Dipeptidyl peptidase 4 99.3 5.2E-12 1.8E-16 111.9 11.4 94 2-109 31-139 (740)
148 3hfq_A Uncharacterized protein 99.3 3E-11 1E-15 96.6 14.4 130 2-172 155-298 (347)
149 1z68_A Fibroblast activation p 99.3 2.6E-12 9E-17 112.5 7.6 98 2-109 74-198 (719)
150 3vgz_A Uncharacterized protein 99.3 3E-11 1E-15 95.9 13.1 94 8-109 68-171 (353)
151 3vgz_A Uncharacterized protein 99.3 2.9E-11 1E-15 96.0 12.8 99 6-109 161-260 (353)
152 1k32_A Tricorn protease; prote 99.3 2.5E-11 8.6E-16 111.2 13.7 122 2-173 311-434 (1045)
153 2z3z_A Dipeptidyl aminopeptida 99.3 1E-11 3.6E-16 108.4 10.1 83 7-99 99-199 (706)
154 3hfq_A Uncharacterized protein 99.3 7.5E-11 2.6E-15 94.3 14.2 95 8-109 62-169 (347)
155 1xfd_A DIP, dipeptidyl aminope 99.3 1.3E-11 4.3E-16 107.9 10.3 97 2-109 75-202 (723)
156 3o4h_A Acylamino-acid-releasin 99.2 2.2E-11 7.6E-16 104.4 9.5 97 2-109 164-274 (582)
157 2z3z_A Dipeptidyl aminopeptida 99.2 4.8E-11 1.7E-15 104.2 11.5 96 7-109 233-340 (706)
158 1pby_B Quinohemoprotein amine 99.2 1E-10 3.5E-15 92.0 12.0 95 2-109 49-161 (337)
159 2ecf_A Dipeptidyl peptidase IV 99.2 8.1E-11 2.8E-15 103.1 10.4 89 2-102 123-230 (741)
160 3scy_A Hypothetical bacterial 99.2 7E-10 2.4E-14 89.2 14.2 103 2-109 113-240 (361)
161 1jof_A Carboxy-CIS,CIS-muconat 99.1 1.9E-09 6.5E-14 87.4 15.8 96 7-109 117-222 (365)
162 1jof_A Carboxy-CIS,CIS-muconat 99.1 3.1E-10 1.1E-14 92.1 10.3 101 2-109 54-174 (365)
163 1xip_A Nucleoporin NUP159; bet 99.1 1.7E-09 5.9E-14 90.0 13.0 89 2-109 100-189 (388)
164 1jmx_B Amine dehydrogenase; ox 99.0 1.5E-09 5E-14 85.8 10.8 99 2-111 58-175 (349)
165 3azo_A Aminopeptidase; POP fam 99.0 1.4E-09 4.8E-14 94.2 10.5 97 2-109 94-224 (662)
166 4a5s_A Dipeptidyl peptidase 4 99.0 2.2E-09 7.6E-14 95.0 11.1 98 2-109 76-200 (740)
167 1xip_A Nucleoporin NUP159; bet 99.0 3.1E-09 1.1E-13 88.4 9.9 92 1-109 51-153 (388)
168 3azo_A Aminopeptidase; POP fam 98.9 6E-09 2E-13 90.2 10.9 101 2-109 144-270 (662)
169 3no2_A Uncharacterized protein 98.9 1.9E-08 6.6E-13 79.4 12.4 96 1-109 7-106 (276)
170 1q7f_A NHL, brain tumor CG1071 98.9 6E-08 2.1E-12 75.3 14.5 96 2-109 135-236 (286)
171 3fvz_A Peptidyl-glycine alpha- 98.8 2E-07 7E-12 74.5 16.5 97 9-109 69-173 (329)
172 3e5z_A Putative gluconolactona 98.8 8.5E-08 2.9E-12 75.0 12.4 89 2-98 43-132 (296)
173 2dg1_A DRP35, lactonase; beta 98.8 2.7E-07 9.2E-12 73.0 15.4 91 2-100 59-154 (333)
174 3pe7_A Oligogalacturonate lyas 98.8 3.1E-08 1E-12 79.8 9.9 85 2-96 50-140 (388)
175 1q7f_A NHL, brain tumor CG1071 98.8 3.9E-07 1.3E-11 70.6 15.8 92 8-109 99-192 (286)
176 3pe7_A Oligogalacturonate lyas 98.8 2.1E-07 7.3E-12 74.8 14.2 97 2-109 95-223 (388)
177 1qks_A Cytochrome CD1 nitrite 98.8 3.1E-07 1.1E-11 79.7 16.0 98 2-109 170-273 (567)
178 2oiz_A Aromatic amine dehydrog 98.8 2E-07 6.9E-12 75.9 13.9 121 4-172 216-360 (361)
179 3fvz_A Peptidyl-glycine alpha- 98.7 4.1E-07 1.4E-11 72.7 15.0 99 2-109 158-275 (329)
180 2gop_A Trilobed protease; beta 98.7 1.3E-07 4.3E-12 75.1 11.1 76 8-99 42-122 (347)
181 2bkl_A Prolyl endopeptidase; m 98.7 9.4E-08 3.2E-12 83.9 11.0 102 30-174 122-241 (695)
182 2xdw_A Prolyl endopeptidase; a 98.7 1.8E-07 6.1E-12 82.3 12.4 94 10-109 152-266 (710)
183 3dsm_A Uncharacterized protein 98.6 4.2E-07 1.4E-11 72.8 11.9 102 2-109 57-159 (328)
184 2bkl_A Prolyl endopeptidase; m 98.6 1.1E-07 3.9E-12 83.4 8.5 99 4-109 142-259 (695)
185 2oiz_A Aromatic amine dehydrog 98.5 5.2E-07 1.8E-11 73.5 10.0 97 7-110 29-139 (361)
186 3e5z_A Putative gluconolactona 98.5 2.5E-06 8.5E-11 66.5 13.3 91 9-109 153-244 (296)
187 3c5m_A Oligogalacturonate lyas 98.5 1.1E-06 3.7E-11 70.4 11.4 88 9-109 216-327 (396)
188 2xdw_A Prolyl endopeptidase; a 98.5 7.5E-07 2.6E-11 78.3 10.9 69 30-109 126-215 (710)
189 2dg1_A DRP35, lactonase; beta 98.5 1.2E-06 4E-11 69.3 11.0 91 6-109 24-119 (333)
190 1pjx_A Dfpase, DIISOPROPYLFLUO 98.5 3.9E-06 1.3E-10 65.4 13.6 95 9-109 153-254 (314)
191 3c5m_A Oligogalacturonate lyas 98.4 2.1E-06 7.2E-11 68.7 10.9 92 7-109 166-271 (396)
192 3dsm_A Uncharacterized protein 98.3 1.3E-05 4.6E-10 64.0 14.1 92 9-109 203-300 (328)
193 1rwi_B Serine/threonine-protei 98.3 1.6E-05 5.4E-10 60.6 13.4 98 2-109 122-220 (270)
194 2gop_A Trilobed protease; beta 98.3 7.1E-06 2.4E-10 64.9 11.6 86 10-109 86-205 (347)
195 1qks_A Cytochrome CD1 nitrite 98.3 3.4E-05 1.2E-09 66.9 15.8 105 2-109 211-327 (567)
196 3g4e_A Regucalcin; six bladed 98.3 3.4E-05 1.2E-09 60.5 14.4 86 2-98 28-115 (297)
197 1rwi_B Serine/threonine-protei 98.2 2.6E-05 9E-10 59.3 12.1 98 2-109 164-262 (270)
198 2z2n_A Virginiamycin B lyase; 98.2 0.00016 5.6E-09 55.3 16.6 96 3-109 30-127 (299)
199 1yr2_A Prolyl oligopeptidase; 98.2 8.2E-06 2.8E-10 72.1 10.3 68 30-109 164-250 (741)
200 3no2_A Uncharacterized protein 98.2 2.9E-05 1E-09 60.9 12.2 97 6-109 53-153 (276)
201 3g4e_A Regucalcin; six bladed 98.2 2.8E-05 9.5E-10 61.0 12.0 76 29-109 149-227 (297)
202 1yr2_A Prolyl oligopeptidase; 98.2 1.4E-05 4.6E-10 70.7 11.1 94 9-109 189-301 (741)
203 2ghs_A AGR_C_1268P; regucalcin 98.1 0.00011 3.7E-09 58.6 15.0 93 10-109 162-258 (326)
204 3dr2_A Exported gluconolactona 98.1 6E-05 2E-09 59.2 12.3 87 2-97 60-147 (305)
205 2hz6_A Endoplasmic reticulum t 98.0 3.9E-07 1.3E-11 74.6 -1.1 100 1-111 11-111 (369)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 98.0 8.3E-05 2.8E-09 57.7 12.2 98 3-109 192-297 (314)
207 3hrp_A Uncharacterized protein 98.0 4.4E-05 1.5E-09 63.2 11.1 100 2-109 145-247 (409)
208 2z2n_A Virginiamycin B lyase; 98.0 0.00046 1.6E-08 52.7 15.8 96 3-109 72-169 (299)
209 2hz6_A Endoplasmic reticulum t 98.0 7.5E-06 2.6E-10 66.8 5.7 93 2-109 95-190 (369)
210 2qe8_A Uncharacterized protein 98.0 2.7E-05 9.3E-10 62.5 8.9 77 29-109 67-152 (343)
211 3hrp_A Uncharacterized protein 98.0 0.00011 3.7E-09 60.8 12.8 103 2-109 185-296 (409)
212 2ghs_A AGR_C_1268P; regucalcin 97.9 0.00021 7E-09 56.9 13.1 97 2-109 64-166 (326)
213 3iuj_A Prolyl endopeptidase; h 97.9 3.1E-05 1E-09 68.1 8.9 99 5-109 151-266 (693)
214 2qc5_A Streptogramin B lactona 97.9 0.0017 5.8E-08 49.5 16.6 96 3-109 35-132 (300)
215 1yiq_A Quinohemoprotein alcoho 97.8 8.3E-05 2.8E-09 65.7 10.2 50 52-109 454-503 (689)
216 3sjl_D Methylamine dehydrogena 97.8 0.00011 3.9E-09 60.9 9.9 99 8-111 58-169 (386)
217 1kb0_A Quinohemoprotein alcoho 97.8 5.3E-05 1.8E-09 66.9 8.3 97 2-109 330-505 (677)
218 2qc5_A Streptogramin B lactona 97.8 0.0025 8.7E-08 48.5 16.6 96 3-109 119-216 (300)
219 3dr2_A Exported gluconolactona 97.7 0.00025 8.5E-09 55.6 10.5 91 9-109 169-265 (305)
220 3iuj_A Prolyl endopeptidase; h 97.7 5.9E-05 2E-09 66.3 7.0 68 30-109 130-215 (693)
221 3sjl_D Methylamine dehydrogena 97.7 0.00036 1.2E-08 57.8 11.2 96 4-109 242-361 (386)
222 2ece_A 462AA long hypothetical 97.6 0.00083 2.8E-08 56.8 12.3 98 7-109 226-350 (462)
223 2qe8_A Uncharacterized protein 97.5 0.0015 5.1E-08 52.2 11.4 97 7-109 143-276 (343)
224 3c75_H MADH, methylamine dehyd 97.4 0.00087 3E-08 56.2 10.1 98 9-111 99-209 (426)
225 2mad_H Methylamine dehydrogena 97.4 0.002 6.7E-08 52.7 11.3 96 10-111 48-156 (373)
226 1fwx_A Nitrous oxide reductase 97.3 0.00088 3E-08 58.4 8.6 97 9-111 254-361 (595)
227 2ece_A 462AA long hypothetical 97.3 0.0027 9.3E-08 53.7 11.2 94 9-109 164-287 (462)
228 3nok_A Glutaminyl cyclase; bet 97.2 0.011 3.9E-07 46.4 13.5 97 5-109 112-208 (268)
229 1yiq_A Quinohemoprotein alcoho 97.2 0.00044 1.5E-08 61.1 5.8 85 8-100 454-538 (689)
230 3mbr_X Glutamine cyclotransfer 97.2 0.0098 3.4E-07 46.1 12.5 97 5-109 81-177 (243)
231 1npe_A Nidogen, entactin; glyc 97.1 0.029 1E-06 42.6 15.2 98 4-109 53-153 (267)
232 2iwa_A Glutamine cyclotransfer 97.1 0.011 3.6E-07 46.5 12.8 98 4-109 81-179 (266)
233 3nol_A Glutamine cyclotransfer 97.1 0.011 3.7E-07 46.4 12.7 97 5-109 103-199 (262)
234 1mda_H Methylamine dehydrogena 97.0 0.0068 2.3E-07 49.7 10.8 66 34-109 269-344 (368)
235 1mda_H Methylamine dehydrogena 97.0 0.0035 1.2E-07 51.4 8.9 96 10-111 47-158 (368)
236 2mad_H Methylamine dehydrogena 97.0 0.011 3.7E-07 48.2 11.8 89 7-109 95-194 (373)
237 3nok_A Glutaminyl cyclase; bet 96.9 0.0078 2.7E-07 47.4 10.0 95 2-111 68-164 (268)
238 1flg_A Protein (quinoprotein e 96.9 0.0032 1.1E-07 54.6 8.6 25 2-26 339-363 (582)
239 1kb0_A Quinohemoprotein alcoho 96.9 0.0019 6.5E-08 56.9 7.2 93 9-109 457-565 (677)
240 2ad6_A Methanol dehydrogenase 96.7 0.0062 2.1E-07 52.6 9.0 25 2-26 319-343 (571)
241 3c75_H MADH, methylamine dehyd 96.7 0.014 4.9E-07 48.7 10.5 94 6-109 283-400 (426)
242 3tc9_A Hypothetical hydrolase; 96.7 0.074 2.5E-06 44.1 14.8 92 9-109 159-255 (430)
243 3nol_A Glutamine cyclotransfer 96.6 0.02 6.8E-07 44.9 10.5 95 2-110 56-154 (262)
244 3hxj_A Pyrrolo-quinoline quino 96.5 0.026 8.7E-07 43.7 10.6 92 2-109 110-202 (330)
245 1npe_A Nidogen, entactin; glyc 96.5 0.058 2E-06 40.9 12.3 93 9-109 10-108 (267)
246 3mbr_X Glutamine cyclotransfer 96.4 0.054 1.9E-06 41.9 11.3 95 3-111 35-133 (243)
247 2iwa_A Glutamine cyclotransfer 96.3 0.042 1.4E-06 43.0 10.5 101 4-109 121-235 (266)
248 3q7m_A Lipoprotein YFGL, BAMB; 96.3 0.19 6.5E-06 39.8 14.6 93 2-109 242-335 (376)
249 1fwx_A Nitrous oxide reductase 96.1 0.0042 1.4E-07 54.1 4.2 58 2-62 292-361 (595)
250 2fp8_A Strictosidine synthase; 96.1 0.36 1.2E-05 37.6 15.4 91 2-99 33-145 (322)
251 3q7m_A Lipoprotein YFGL, BAMB; 95.9 0.17 5.7E-06 40.2 12.5 96 2-111 56-162 (376)
252 3v64_C Agrin; beta propeller, 95.8 0.37 1.3E-05 38.5 14.3 94 8-109 94-189 (349)
253 2fp8_A Strictosidine synthase; 95.8 0.31 1.1E-05 37.9 13.5 92 8-109 100-214 (322)
254 3hxj_A Pyrrolo-quinoline quino 95.6 0.15 5E-06 39.2 10.9 92 2-109 150-242 (330)
255 1kv9_A Type II quinohemoprotei 95.5 0.059 2E-06 47.2 9.1 51 51-109 436-486 (668)
256 3v65_B Low-density lipoprotein 95.5 0.47 1.6E-05 38.4 13.9 95 7-109 94-188 (386)
257 1ijq_A LDL receptor, low-densi 95.5 0.61 2.1E-05 36.5 14.2 95 7-109 50-150 (316)
258 3v65_B Low-density lipoprotein 95.4 0.29 1E-05 39.7 12.4 94 8-109 137-232 (386)
259 3v64_C Agrin; beta propeller, 95.3 0.68 2.3E-05 37.0 14.2 94 8-109 52-145 (349)
260 1ijq_A LDL receptor, low-densi 95.3 0.71 2.4E-05 36.2 14.1 98 8-109 9-106 (316)
261 1w6s_A Methanol dehydrogenase 95.3 0.099 3.4E-06 45.5 9.5 25 2-26 326-350 (599)
262 2xe4_A Oligopeptidase B; hydro 94.8 0.1 3.5E-06 46.2 8.5 68 30-109 175-254 (751)
263 2ad6_A Methanol dehydrogenase 94.8 0.04 1.4E-06 47.4 5.7 57 7-66 442-498 (571)
264 1kv9_A Type II quinohemoprotei 94.7 0.045 1.6E-06 48.0 5.8 57 7-66 436-492 (668)
265 3kya_A Putative phosphatase; s 94.3 1.9 6.6E-05 36.6 14.9 98 8-110 161-277 (496)
266 1flg_A Protein (quinoprotein e 94.1 0.067 2.3E-06 46.2 5.6 55 7-66 464-520 (582)
267 4hw6_A Hypothetical protein, I 94.0 0.78 2.7E-05 37.9 11.8 92 9-109 162-257 (433)
268 3pbp_A Nucleoporin NUP82; beta 93.9 2.5 8.5E-05 35.5 15.0 98 7-109 39-156 (452)
269 3sre_A PON1, serum paraoxonase 93.4 2.6 9E-05 34.1 13.5 90 7-99 81-183 (355)
270 2ism_A Putative oxidoreductase 93.3 0.99 3.4E-05 36.1 10.9 73 29-109 31-112 (352)
271 3p5b_L Low density lipoprotein 93.2 2.9 9.8E-05 34.0 15.1 73 29-109 159-232 (400)
272 2p9w_A MAL S 1 allergenic prot 93.2 2.1 7.2E-05 34.5 12.5 99 3-109 29-166 (334)
273 2xe4_A Oligopeptidase B; hydro 93.1 0.38 1.3E-05 42.6 8.8 95 10-111 202-304 (751)
274 3sov_A LRP-6, low-density lipo 92.9 2.8 9.5E-05 33.0 13.7 72 30-109 80-152 (318)
275 3m0c_C LDL receptor, low-densi 92.8 3.2 0.00011 37.2 14.3 72 30-109 472-544 (791)
276 2p9w_A MAL S 1 allergenic prot 92.6 0.96 3.3E-05 36.5 9.7 97 8-109 99-213 (334)
277 3a9g_A Putative uncharacterize 92.5 1 3.4E-05 36.2 9.9 73 29-109 29-112 (354)
278 3p5b_L Low density lipoprotein 92.5 3.7 0.00013 33.3 15.7 99 7-109 90-188 (400)
279 1w6s_A Methanol dehydrogenase 92.3 0.2 7E-06 43.5 5.7 55 7-66 451-507 (599)
280 3m0c_C LDL receptor, low-densi 92.1 5 0.00017 36.0 14.7 98 8-109 403-500 (791)
281 1k3i_A Galactose oxidase precu 92.1 1.2 4.1E-05 38.5 10.5 93 10-111 220-323 (656)
282 2g8s_A Glucose/sorbosone dehyd 92.1 1.2 4.1E-05 35.6 9.8 67 29-100 18-89 (353)
283 3pbp_A Nucleoporin NUP82; beta 92.1 1 3.5E-05 37.8 9.5 77 28-106 124-207 (452)
284 3das_A Putative oxidoreductase 90.7 3 0.0001 33.6 10.8 76 29-109 32-114 (347)
285 4gq2_M Nucleoporin NUP120; bet 90.4 1.2 4.2E-05 40.7 9.1 36 30-68 237-272 (950)
286 2p4o_A Hypothetical protein; p 90.0 4 0.00014 31.3 10.8 70 28-109 31-102 (306)
287 1cru_A Protein (soluble quinop 90.0 2.6 8.8E-05 35.1 10.2 63 29-99 27-99 (454)
288 4a2l_A BT_4663, two-component 90.0 9.5 0.00032 33.5 15.7 100 2-109 370-478 (795)
289 1n7d_A LDL receptor, low-densi 89.8 0.6 2.1E-05 41.1 6.4 96 9-109 386-482 (699)
290 4a0p_A LRP6, LRP-6, low-densit 89.5 9.8 0.00034 33.0 14.2 94 8-109 58-153 (628)
291 2xbg_A YCF48-like protein; pho 89.2 6.6 0.00023 30.6 12.6 67 28-104 204-272 (327)
292 3amr_A 3-phytase; beta-propell 89.1 5.6 0.00019 32.3 11.2 103 2-109 43-160 (355)
293 2p4o_A Hypothetical protein; p 88.9 6.4 0.00022 30.1 14.2 97 4-110 48-146 (306)
294 2wg3_C Hedgehog-interacting pr 88.0 8.6 0.00029 32.1 12.0 67 29-99 14-91 (463)
295 1n7d_A LDL receptor, low-densi 87.9 1.5 5.1E-05 38.6 7.6 97 6-110 472-570 (699)
296 3tc9_A Hypothetical hydrolase; 86.9 5.2 0.00018 32.8 9.9 73 31-110 228-300 (430)
297 2zux_A YESW protein; beta-prop 86.6 15 0.00052 31.8 13.0 26 149-174 352-378 (591)
298 3amr_A 3-phytase; beta-propell 85.0 14 0.00048 29.9 12.0 105 2-110 146-262 (355)
299 2ism_A Putative oxidoreductase 85.0 13 0.00043 29.4 13.6 90 4-99 46-153 (352)
300 3qqz_A Putative uncharacterize 84.7 12 0.0004 28.7 13.7 99 7-109 89-202 (255)
301 3s94_A LRP-6, low-density lipo 83.8 20 0.0007 30.9 13.1 96 7-109 16-113 (619)
302 3a9g_A Putative uncharacterize 83.2 16 0.00053 29.0 14.0 92 4-100 44-154 (354)
303 4a2l_A BT_4663, two-component 82.8 24 0.00081 30.9 16.2 98 2-109 420-524 (795)
304 3sov_A LRP-6, low-density lipo 81.9 16 0.00056 28.4 13.3 95 7-110 99-196 (318)
305 1k3i_A Galactose oxidase precu 81.4 9.1 0.00031 32.9 9.5 73 33-111 190-274 (656)
306 3v9f_A Two-component system se 80.3 29 0.00099 30.3 13.0 95 3-109 377-476 (781)
307 2xbg_A YCF48-like protein; pho 79.8 19 0.00066 27.9 10.5 70 29-109 250-320 (327)
308 3sre_A PON1, serum paraoxonase 79.6 10 0.00035 30.6 8.6 29 81-109 222-250 (355)
309 1cru_A Protein (soluble quinop 79.5 25 0.00086 29.0 13.8 94 5-100 43-163 (454)
310 3qqz_A Putative uncharacterize 78.5 20 0.00069 27.4 13.1 101 3-109 43-149 (255)
311 4a0p_A LRP6, LRP-6, low-densit 78.4 32 0.0011 29.7 14.6 95 7-109 13-109 (628)
312 3kya_A Putative phosphatase; s 75.7 27 0.00092 29.5 10.4 75 31-109 249-339 (496)
313 3ei3_A DNA damage-binding prot 73.7 50 0.0017 30.9 12.5 90 10-110 493-590 (1158)
314 3v9f_A Two-component system se 70.6 53 0.0018 28.5 12.4 95 4-109 422-522 (781)
315 4hw6_A Hypothetical protein, I 70.0 13 0.00044 30.5 7.0 73 31-109 230-302 (433)
316 2be1_A Serine/threonine-protei 69.8 12 0.00041 30.0 6.6 62 1-63 12-77 (339)
317 3s94_A LRP-6, low-density lipo 68.8 56 0.0019 28.1 14.5 72 30-109 393-465 (619)
318 3das_A Putative oxidoreductase 67.5 46 0.0016 26.6 14.0 91 8-102 52-161 (347)
319 3sbq_A Nitrous-oxide reductase 63.9 19 0.00064 31.5 6.9 98 10-114 299-411 (638)
320 3f7f_A Nucleoporin NUP120; nuc 63.6 8.8 0.0003 34.2 4.9 32 31-67 224-255 (729)
321 4fhn_B Nucleoporin NUP120; pro 59.4 5.4 0.00018 37.1 3.0 25 44-68 250-274 (1139)
322 3ei3_A DNA damage-binding prot 59.0 1.2E+02 0.004 28.4 12.2 97 8-109 531-634 (1158)
323 3f7f_A Nucleoporin NUP120; nuc 56.1 9.3 0.00032 34.0 3.8 25 2-26 234-258 (729)
324 4fhn_B Nucleoporin NUP120; pro 51.7 11 0.00037 35.1 3.6 24 2-25 252-275 (1139)
325 4gq2_M Nucleoporin NUP120; bet 50.6 12 0.0004 34.2 3.6 24 2-25 250-273 (950)
326 1tl2_A L10, protein (tachylect 49.6 83 0.0029 23.9 8.3 73 29-109 41-114 (236)
327 3q6k_A 43.2 kDa salivary prote 39.3 1.5E+02 0.0052 23.9 9.1 55 54-109 124-188 (381)
328 2g8s_A Glucose/sorbosone dehyd 38.9 75 0.0026 24.9 6.4 27 81-109 19-46 (353)
329 2wg3_C Hedgehog-interacting pr 38.5 48 0.0016 27.5 5.3 28 81-109 15-43 (463)
330 1tl2_A L10, protein (tachylect 37.6 1.3E+02 0.0045 22.8 7.5 64 32-105 91-157 (236)
331 2xn4_A Kelch-like protein 2; s 28.1 1.8E+02 0.0062 21.4 8.6 89 9-109 173-274 (302)
332 2zux_A YESW protein; beta-prop 26.8 3.1E+02 0.011 23.7 11.8 63 11-90 294-374 (591)
333 3zwu_A Alkaline phosphatase PH 23.3 2.6E+02 0.0089 24.0 7.4 22 76-97 527-548 (592)
334 2zuy_A YESX protein; beta-prop 22.8 3.8E+02 0.013 23.3 12.0 43 10-55 156-207 (620)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.94 E-value=8.9e-26 Score=184.44 Aligned_cols=162 Identities=18% Similarity=0.246 Sum_probs=117.0
Q ss_pred EEEEecCCcEEEEECCCCCeEEE-----eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWE-----TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA 76 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~-----~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~ 76 (174)
|++|+.||+|+|||+++++.... ..|...|++|+|+|++ ++|++|+.|++|+|||++++++ +.++.+
T Consensus 96 l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg---~~l~sgs~d~~i~iwd~~~~~~-----~~~~~~ 167 (344)
T 4gqb_B 96 ILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG---TQAVSGSKDICIKVWDLAQQVV-----LSSYRA 167 (344)
T ss_dssp EEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEE-----EEEECC
T ss_pred EEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCC---CEEEEEeCCCeEEEEECCCCcE-----EEEEcC
Confidence 78999999999999998875432 2477889999999974 8999999999999999998654 345679
Q ss_pred cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccc---cccceeeeecCC-CCCC-cc--cCCCCCcccc--cc
Q psy6415 77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADT---NLCSIFRYSSNY-PTQR-TK--PDIDDIPMGV--PG 147 (174)
Q Consensus 77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~---~~~~~~~~~~~~-~~~~-~~--~~~dg~~~~~--~~ 147 (174)
|.. .|++++|+|++..+||||+.||+|+|||+++.....+ ...........+ |... .+ ...||. +.+ ..
T Consensus 168 h~~-~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~-v~~wd~~ 245 (344)
T 4gqb_B 168 HAA-QVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGT-VSLVDTK 245 (344)
T ss_dssp CSS-CEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSE-EEEEESC
T ss_pred cCC-ceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCc-EEEEECC
Confidence 999 9999999998778999999999999999944111000 011111112222 3222 11 124442 111 34
Q ss_pred ccceeeeeeccccceeeeeeCCCCCC
Q psy6415 148 SLTLLQEATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 148 ~~~ll~~~~~h~~~V~~l~~spd~~~ 173 (174)
+++++.++.+|..+|++++||||+..
T Consensus 246 ~~~~~~~~~~h~~~v~~v~fsp~g~~ 271 (344)
T 4gqb_B 246 STSCVLSSAVHSQCVTGLVFSPHSVP 271 (344)
T ss_dssp C--CCEEEECCSSCEEEEEECSSSSC
T ss_pred CCcEEEEEcCCCCCEEEEEEccCCCe
Confidence 56789999999999999999999853
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.93 E-value=2.2e-25 Score=182.07 Aligned_cols=127 Identities=11% Similarity=0.100 Sum_probs=104.7
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEee---cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETN---LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH 77 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~---~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h 77 (174)
+|+||+.||+|+|||+++++...... +...+++++|+|++ +++|++|+.|++|+|||+++.+++ .++.+|
T Consensus 184 ~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~l~sg~~dg~v~~wd~~~~~~~-----~~~~~h 256 (344)
T 4gqb_B 184 VFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQ--SEVFVFGDENGTVSLVDTKSTSCV-----LSSAVH 256 (344)
T ss_dssp EEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSC--TTEEEEEETTSEEEEEESCC--CC-----EEEECC
T ss_pred ceeeeccccccccccccccceeeeeecceeeccceeeeecCCC--CcceEEeccCCcEEEEECCCCcEE-----EEEcCC
Confidence 37899999999999999998766542 34569999999964 478999999999999999987654 355689
Q ss_pred CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415 78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL 157 (174)
Q Consensus 78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~ 157 (174)
.. .|++|+|+|++..+||||+.||+|+|||++ . ++ +..+.+
T Consensus 257 ~~-~v~~v~fsp~g~~~lasgs~D~~i~vwd~~----------------------------~---------~~-~~~~~~ 297 (344)
T 4gqb_B 257 SQ-CVTGLVFSPHSVPFLASLSEDCSLAVLDSS----------------------------L---------SE-LFRSQA 297 (344)
T ss_dssp SS-CEEEEEECSSSSCCEEEEETTSCEEEECTT----------------------------C---------CE-EEEECC
T ss_pred CC-CEEEEEEccCCCeEEEEEeCCCeEEEEECC----------------------------C---------Cc-EEEEcC
Confidence 99 999999999766789999999999999991 1 12 345789
Q ss_pred cccceeeeeeCCCCCC
Q psy6415 158 SSQPINSLDWSADKLG 173 (174)
Q Consensus 158 h~~~V~~l~~spd~~~ 173 (174)
|+.+|++|+||||++.
T Consensus 298 H~~~V~~v~~sp~~~~ 313 (344)
T 4gqb_B 298 HRDFVRDATWSPLNHS 313 (344)
T ss_dssp CSSCEEEEEECSSSTT
T ss_pred CCCCEEEEEEeCCCCe
Confidence 9999999999999875
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.93 E-value=1.6e-24 Score=172.79 Aligned_cols=164 Identities=8% Similarity=0.058 Sum_probs=117.9
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+|++|+.|++|++||++++++...+ .|...|++|+|+|++ +.|++|+.|++|+|||+++... ....+.+|..
T Consensus 69 ~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~sgs~D~~v~lWd~~~~~~----~~~~~~~h~~ 141 (304)
T 2ynn_A 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK---PYVLSGSDDLTVKLWNWENNWA----LEQTFEGHEH 141 (304)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS---SEEEEEETTSCEEEEEGGGTTE----EEEEECCCCS
T ss_pred EEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCC---CEEEEECCCCeEEEEECCCCcc----hhhhhcccCC
Confidence 3899999999999999999887654 477889999999974 8999999999999999987532 2235578999
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccc---cc-cccceeeeecCC-CCCCcc--cCCCCCcccc--ccccc
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRA---DT-NLCSIFRYSSNY-PTQRTK--PDIDDIPMGV--PGSLT 150 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~---~~-~~~~~~~~~~~~-~~~~~~--~~~dg~~~~~--~~~~~ 150 (174)
.|++++|+|.++.+||||+.||+|++||+.+.... .. ....+..+.... |+...+ ...||. +.+ ..+++
T Consensus 142 -~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~-i~iWd~~~~~ 219 (304)
T 2ynn_A 142 -FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQTKS 219 (304)
T ss_dssp -CEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSE-EEEEETTTTE
T ss_pred -cEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCe-EEEEeCCCCc
Confidence 99999999977889999999999999999331110 00 000010010000 122222 113431 111 24557
Q ss_pred eeeeeeccccceeeeeeCCCCCC
Q psy6415 151 LLQEATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 151 ll~~~~~h~~~V~~l~~spd~~~ 173 (174)
++.++.+|..+|.+++|+|+++-
T Consensus 220 ~~~~~~~h~~~v~~~~~~p~~~~ 242 (304)
T 2ynn_A 220 CVATLEGHMSNVSFAVFHPTLPI 242 (304)
T ss_dssp EEEEEECCSSCEEEEEECSSSSE
T ss_pred cceeeCCCCCCEEEEEECCCCCE
Confidence 89999999999999999999863
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.93 E-value=1.4e-24 Score=175.07 Aligned_cols=126 Identities=14% Similarity=0.245 Sum_probs=109.2
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+||+|+.||+|++||++++++..... |...|++++|+|++ +.|++|+.|++|+|||+++.+. ..++.+|..
T Consensus 178 ~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~---~~l~s~s~dg~i~iwd~~~~~~-----~~~~~~h~~ 249 (321)
T 3ow8_A 178 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS---QLLVTASDDGYIKIYDVQHANL-----AGTLSGHAS 249 (321)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTS---CEEEEECTTSCEEEEETTTCCE-----EEEECCCSS
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCC---CEEEEEcCCCeEEEEECCCcce-----eEEEcCCCC
Confidence 48999999999999999998876654 67789999999974 8999999999999999998653 345678999
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS 159 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~ 159 (174)
.|++++|+| ++.+||||+.||+|++||+ . +++++.++.+|.
T Consensus 250 -~v~~~~~sp-~~~~l~s~s~D~~v~iwd~-----------------------------~--------~~~~~~~~~~h~ 290 (321)
T 3ow8_A 250 -WVLNVAFCP-DDTHFVSSSSDKSVKVWDV-----------------------------G--------TRTCVHTFFDHQ 290 (321)
T ss_dssp -CEEEEEECT-TSSEEEEEETTSCEEEEET-----------------------------T--------TTEEEEEECCCS
T ss_pred -ceEEEEECC-CCCEEEEEeCCCcEEEEeC-----------------------------C--------CCEEEEEEcCCC
Confidence 999999999 5678999999999999999 1 135788999999
Q ss_pred cceeeeeeCCCCCC
Q psy6415 160 QPINSLDWSADKLG 173 (174)
Q Consensus 160 ~~V~~l~~spd~~~ 173 (174)
.+|++++|+||++-
T Consensus 291 ~~v~~v~~s~~g~~ 304 (321)
T 3ow8_A 291 DQVWGVKYNGNGSK 304 (321)
T ss_dssp SCEEEEEECTTSSE
T ss_pred CcEEEEEECCCCCE
Confidence 99999999999863
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.92 E-value=4.8e-24 Score=172.48 Aligned_cols=162 Identities=14% Similarity=0.102 Sum_probs=117.7
Q ss_pred EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
|++|+.|++|++||++++++...+ .|...|++++|+|++ +.|++|+.|++|+|||+++..+. .++.+|..
T Consensus 157 l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~sg~~d~~v~~wd~~~~~~~-----~~~~~h~~- 227 (340)
T 1got_B 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDT---RLFVSGACDASAKLWDVREGMCR-----QTFTGHES- 227 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTCSEE-----EEECCCSS-
T ss_pred EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCC---CEEEEEeCCCcEEEEECCCCeeE-----EEEcCCcC-
Confidence 789999999999999999877665 467889999999974 89999999999999999986543 35568999
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccc---cccceeeeecCC-CCCCcccC--CCCCcccc--cccccee
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADT---NLCSIFRYSSNY-PTQRTKPD--IDDIPMGV--PGSLTLL 152 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~--~dg~~~~~--~~~~~ll 152 (174)
.|++++|+| ++.+||+|+.||+|++||+.+...... +..........| |++..++. .||. +.+ ..+.+.+
T Consensus 228 ~v~~v~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~-i~vwd~~~~~~~ 305 (340)
T 1got_B 228 DINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN-CNVWDALKADRA 305 (340)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEE
T ss_pred CEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCe-EEEEEcccCcEe
Confidence 999999999 567999999999999999943111000 000000111222 33332221 3331 111 2345678
Q ss_pred eeeeccccceeeeeeCCCCCCC
Q psy6415 153 QEATLSSQPINSLDWSADKLGL 174 (174)
Q Consensus 153 ~~~~~h~~~V~~l~~spd~~~~ 174 (174)
.++.+|..+|.+++||||++.|
T Consensus 306 ~~~~~h~~~v~~~~~s~dg~~l 327 (340)
T 1got_B 306 GVLAGHDNRVSCLGVTDDGMAV 327 (340)
T ss_dssp EEEECCSSCEEEEEECTTSSCE
T ss_pred eEeecCCCcEEEEEEcCCCCEE
Confidence 8999999999999999998743
No 6
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.92 E-value=3.7e-24 Score=170.89 Aligned_cols=155 Identities=65% Similarity=1.124 Sum_probs=122.4
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
+|++|+.||.|++||++++++.....+...|.+++|+|.+.+++.|++++.|+.|++||+++.++...+....+.+|..
T Consensus 182 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~- 260 (357)
T 3i2n_A 182 VVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKS- 260 (357)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSS-
T ss_pred EEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcC-
Confidence 3789999999999999999887777788999999999921114899999999999999999876655444444558988
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ 160 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~ 160 (174)
.|++++|+|++..+|++|+.||.|++||++. +........+|.+.+..++.+++.++.+|..
T Consensus 261 ~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~------------------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 322 (357)
T 3i2n_A 261 TVWQVRHLPQNRELFLTAGGAGGLHLWKYEY------------------PIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQ 322 (357)
T ss_dssp CEEEEEEETTEEEEEEEEETTSEEEEEEEEC------------------CSCC--CCTTSCCCCCCCEEEEEEEEECCSS
T ss_pred CEEEEEECCCCCcEEEEEeCCCcEEEeecCC------------------CcccccccCCCCccccccccceeeccccCCC
Confidence 9999999996544899999999999999921 1111112234555555566788999999999
Q ss_pred ceeeeeeCCCCCCC
Q psy6415 161 PINSLDWSADKLGL 174 (174)
Q Consensus 161 ~V~~l~~spd~~~~ 174 (174)
+|++++|||+++.|
T Consensus 323 ~v~~~~~s~~~~~l 336 (357)
T 3i2n_A 323 PISSLDWSPDKRGL 336 (357)
T ss_dssp CEEEEEECSSSTTE
T ss_pred CeeEEEEcCCCCeE
Confidence 99999999999754
No 7
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.92 E-value=1e-23 Score=171.91 Aligned_cols=164 Identities=16% Similarity=0.192 Sum_probs=117.6
Q ss_pred EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
|++|+.||+|++||++++++...+ .|...|.+++|+|.. +++.|++|+.|++|++||+++.++. ..+.+|..
T Consensus 169 l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~g~~l~sgs~Dg~v~~wd~~~~~~~-----~~~~~h~~- 241 (354)
T 2pbi_B 169 ILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSE-TGNTFVSGGCDKKAMVWDMRSGQCV-----QAFETHES- 241 (354)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCS-SCCEEEEEETTSCEEEEETTTCCEE-----EEECCCSS-
T ss_pred EEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCC-CCCEEEEEeCCCeEEEEECCCCcEE-----EEecCCCC-
Confidence 789999999999999999887665 467889999998852 2579999999999999999987643 34568999
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEecccccccc--cccccee-eeecCC-CCCCcccC--CCCCcccc--cccccee
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRAD--TNLCSIF-RYSSNY-PTQRTKPD--IDDIPMGV--PGSLTLL 152 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~--~~~~~~~-~~~~~~-~~~~~~~~--~dg~~~~~--~~~~~ll 152 (174)
.|++++|+| ++..||||+.||+|++||+.+..... ......+ .....+ |++..++. .||. +.+ ..+++.+
T Consensus 242 ~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~-i~vwd~~~~~~~ 319 (354)
T 2pbi_B 242 DVNSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYT-INVWDVLKGSRV 319 (354)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSC-EEEEETTTCSEE
T ss_pred CeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCc-EEEEECCCCceE
Confidence 999999999 56799999999999999993311100 0000000 011222 33332221 3331 111 2345678
Q ss_pred eeeeccccceeeeeeCCCCCCC
Q psy6415 153 QEATLSSQPINSLDWSADKLGL 174 (174)
Q Consensus 153 ~~~~~h~~~V~~l~~spd~~~~ 174 (174)
..+.+|..+|.+++||||++.|
T Consensus 320 ~~l~~h~~~v~~l~~spdg~~l 341 (354)
T 2pbi_B 320 SILFGHENRVSTLRVSPDGTAF 341 (354)
T ss_dssp EEECCCSSCEEEEEECTTSSCE
T ss_pred EEEECCCCcEEEEEECCCCCEE
Confidence 8899999999999999999753
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.91 E-value=1e-23 Score=168.07 Aligned_cols=125 Identities=14% Similarity=0.210 Sum_probs=106.1
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+||+|+.||+|+|||++++....... +...|.+++|+|++ +.|++|+.|++|+|||+++.++ +..+.+|..
T Consensus 27 ~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~s~s~d~~i~vwd~~~~~~-----~~~~~~h~~ 98 (304)
T 2ynn_A 27 WVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARK---NWIIVGSDDFRIRVFNYNTGEK-----VVDFEAHPD 98 (304)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGG---TEEEEEETTSEEEEEETTTCCE-----EEEEECCSS
T ss_pred EEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCC---CEEEEECCCCEEEEEECCCCcE-----EEEEeCCCC
Confidence 48999999999999999988776554 66789999999974 8999999999999999998764 345568999
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS 159 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~ 159 (174)
.|++++|+| ++.+||||+.||+|++||++ .+ ..+...+.+|.
T Consensus 99 -~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~----------------------------~~--------~~~~~~~~~h~ 140 (304)
T 2ynn_A 99 -YIRSIAVHP-TKPYVLSGSDDLTVKLWNWE----------------------------NN--------WALEQTFEGHE 140 (304)
T ss_dssp -CEEEEEECS-SSSEEEEEETTSCEEEEEGG----------------------------GT--------TEEEEEECCCC
T ss_pred -cEEEEEEcC-CCCEEEEECCCCeEEEEECC----------------------------CC--------cchhhhhcccC
Confidence 999999999 46789999999999999991 11 13567889999
Q ss_pred cceeeeeeCCCC
Q psy6415 160 QPINSLDWSADK 171 (174)
Q Consensus 160 ~~V~~l~~spd~ 171 (174)
.+|++++|+|++
T Consensus 141 ~~v~~v~~~p~~ 152 (304)
T 2ynn_A 141 HFVMCVAFNPKD 152 (304)
T ss_dssp SCEEEEEECTTC
T ss_pred CcEEEEEECCCC
Confidence 999999999953
No 9
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.91 E-value=1.7e-23 Score=169.26 Aligned_cols=162 Identities=14% Similarity=0.238 Sum_probs=111.4
Q ss_pred CEEEEecCCcEEEEECCCCC-------eEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee
Q psy6415 1 MVVAGYDNGDLKMFDLKTMS-------LKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL 72 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~-------~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~ 72 (174)
+||||+.|++|+|||+.++. .... ..|...|.+++|+|++ ..|++|+.|++|+|||+++.++ ..
T Consensus 41 ~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~---~~l~s~s~D~~v~lwd~~~~~~-----~~ 112 (343)
T 2xzm_R 41 VLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN---CFAISSSWDKTLRLWDLRTGTT-----YK 112 (343)
T ss_dssp EEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST---TEEEEEETTSEEEEEETTSSCE-----EE
T ss_pred EEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC---CEEEEEcCCCcEEEEECCCCcE-----EE
Confidence 48999999999999997543 2222 3477889999999974 8999999999999999998654 33
Q ss_pred eecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccc--c-ccccceeeeecCC-CCCC----------cc--c
Q psy6415 73 SEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRA--D-TNLCSIFRYSSNY-PTQR----------TK--P 136 (174)
Q Consensus 73 ~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~--~-~~~~~~~~~~~~~-~~~~----------~~--~ 136 (174)
.+.+|.. .|++++|+| ++..||+|+.||+|++||+...... . ...+........| |... .+ .
T Consensus 113 ~~~~h~~-~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~ 190 (343)
T 2xzm_R 113 RFVGHQS-EVYSVAFSP-DNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASV 190 (343)
T ss_dssp EEECCCS-CEEEEEECS-STTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEE
T ss_pred EEcCCCC-cEEEEEECC-CCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEE
Confidence 5568999 999999999 5678999999999999999321110 0 0011111111222 2211 11 1
Q ss_pred CCCCCcccc-ccccceeeeeeccccceeeeeeCCCCCC
Q psy6415 137 DIDDIPMGV-PGSLTLLQEATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 137 ~~dg~~~~~-~~~~~ll~~~~~h~~~V~~l~~spd~~~ 173 (174)
..||. +.+ ....+++.++.+|..+|++++|||||+-
T Consensus 191 ~~d~~-i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~ 227 (343)
T 2xzm_R 191 GWDGR-LKVWNTNFQIRYTFKAHESNVNHLSISPNGKY 227 (343)
T ss_dssp ETTSE-EEEEETTTEEEEEEECCSSCEEEEEECTTSSE
T ss_pred cCCCE-EEEEcCCCceeEEEcCccccceEEEECCCCCE
Confidence 12331 111 1223467788999999999999999864
No 10
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.91 E-value=2.7e-23 Score=170.58 Aligned_cols=164 Identities=14% Similarity=0.151 Sum_probs=112.7
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe------ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET------NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE 74 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~------~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~ 74 (174)
.|+||+.|++|++||+++++..... .|...|.+++|+|.+ ++.|++|+.|++|+|||++.... ....+
T Consensus 172 ~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~sgs~D~~v~~wd~~~~~~----~~~~~ 245 (380)
T 3iz6_a 172 RLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLN--ANMFISGSCDTTVRLWDLRITSR----AVRTY 245 (380)
T ss_dssp CEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSS--CCEEEEEETTSCEEEEETTTTCC----CCEEE
T ss_pred EEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCC--CCEEEEEECCCeEEEEECCCCCc----ceEEE
Confidence 3899999999999999999876543 356789999998743 48999999999999999985321 23455
Q ss_pred cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccccc-----cc---ccceeeeecCC-CCCCcccC--CCCCcc
Q psy6415 75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRAD-----TN---LCSIFRYSSNY-PTQRTKPD--IDDIPM 143 (174)
Q Consensus 75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~-----~~---~~~~~~~~~~~-~~~~~~~~--~dg~~~ 143 (174)
.+|.. .|++|+|+| ++..||||+.||+|+|||+.+..... .. ....+.....| |++..++. .||. +
T Consensus 246 ~~h~~-~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~-i 322 (380)
T 3iz6_a 246 HGHEG-DINSVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD-C 322 (380)
T ss_dssp CCCSS-CCCEEEECT-TSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC-E
T ss_pred CCcCC-CeEEEEEec-CCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCC-E
Confidence 68999 999999999 56799999999999999994411100 00 00000111222 33332211 2331 1
Q ss_pred cc--ccccceeeee----eccccceeeeeeCCCCCC
Q psy6415 144 GV--PGSLTLLQEA----TLSSQPINSLDWSADKLG 173 (174)
Q Consensus 144 ~~--~~~~~ll~~~----~~h~~~V~~l~~spd~~~ 173 (174)
.+ ...++.+..+ .+|..+|++|+|||||+.
T Consensus 323 ~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~ 358 (380)
T 3iz6_a 323 YVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSA 358 (380)
T ss_dssp EEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSE
T ss_pred EEEECCCCceEEEEecccCCCCCceEEEEECCCCCE
Confidence 11 1233444454 789999999999999864
No 11
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.91 E-value=1.1e-23 Score=172.16 Aligned_cols=126 Identities=6% Similarity=0.118 Sum_probs=103.6
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe---ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET---NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH 77 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~---~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h 77 (174)
++++++.||+|+|||+++++..... .+...|.+|+|+|++ ++.|++|+.|+.|+|||+++.++. .++.+|
T Consensus 196 ~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~--~~~la~g~~d~~i~~wd~~~~~~~-----~~~~~~ 268 (357)
T 4g56_B 196 IFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEK--DDTFACGDETGNVSLVNIKNPDSA-----QTSAVH 268 (357)
T ss_dssp CEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTS--TTEEEEEESSSCEEEEESSCGGGC-----EEECCC
T ss_pred eeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcc--cceEEEeecccceeEEECCCCcEe-----EEEecc
Confidence 4789999999999999998765433 245679999999974 478999999999999999987643 345689
Q ss_pred CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415 78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL 157 (174)
Q Consensus 78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~ 157 (174)
.. .|++++|+|+++.+||||+.||+|+|||++ . ++++..+ +
T Consensus 269 ~~-~v~~l~~sp~~~~~lasgs~D~~i~iwd~~----------------------------~---------~~~~~~~-~ 309 (357)
T 4g56_B 269 SQ-NITGLAYSYHSSPFLASISEDCTVAVLDAD----------------------------F---------SEVFRDL-S 309 (357)
T ss_dssp SS-CEEEEEECSSSSCCEEEEETTSCEEEECTT----------------------------S---------CEEEEEC-C
T ss_pred ce-eEEEEEEcCCCCCEEEEEeCCCEEEEEECC----------------------------C---------CcEeEEC-C
Confidence 88 999999999877789999999999999991 1 2344444 8
Q ss_pred cccceeeeeeCC-CCC
Q psy6415 158 SSQPINSLDWSA-DKL 172 (174)
Q Consensus 158 h~~~V~~l~~sp-d~~ 172 (174)
|+.+|++|+||| |+.
T Consensus 310 H~~~V~~vafsP~d~~ 325 (357)
T 4g56_B 310 HRDFVTGVAWSPLDHS 325 (357)
T ss_dssp CSSCEEEEEECSSSTT
T ss_pred CCCCEEEEEEeCCCCC
Confidence 999999999999 554
No 12
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.91 E-value=4.2e-23 Score=166.44 Aligned_cols=135 Identities=13% Similarity=0.174 Sum_probs=100.4
Q ss_pred CEEEEecCCcEEEEECCCCC--eEEEe--e-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc--cceeeee
Q psy6415 1 MVVAGYDNGDLKMFDLKTMS--LKWET--N-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE--KGFAYLS 73 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~--~~~~~--~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~--~~~~~~~ 73 (174)
+||+|+.|++|+|||++++. +.... . |...|++|+|+|++ +.|++|+.|++|+|||++..... .......
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~---~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~ 102 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHT---SLLAAGSFDSTVSIWAKEESADRTFEMDLLAI 102 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTS---SEEEEEETTSCEEEEEC-------CCCEEEEE
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCC---CEEEEEeCCCcEEEEEcccCcCccccceeEEE
Confidence 48999999999999998763 33333 2 67889999999974 89999999999999999643210 1112345
Q ss_pred ecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceee
Q psy6415 74 EKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQ 153 (174)
Q Consensus 74 ~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~ 153 (174)
+.+|.. .|++++|+| ++.+||||+.|++|++||+.. .+ ...+++.
T Consensus 103 ~~~h~~-~V~~v~~sp-~g~~las~s~D~~v~iwd~~~---------------------------~~------~~~~~~~ 147 (330)
T 2hes_X 103 IEGHEN-EVKGVAWSN-DGYYLATCSRDKSVWIWETDE---------------------------SG------EEYECIS 147 (330)
T ss_dssp EC-----CEEEEEECT-TSCEEEEEETTSCEEEEECCT---------------------------TC------CCCEEEE
T ss_pred EcCCCC-cEEEEEECC-CCCEEEEEeCCCEEEEEeccC---------------------------CC------CCeEEEE
Confidence 678999 999999999 567999999999999999910 01 0124678
Q ss_pred eeeccccceeeeeeCCCCCC
Q psy6415 154 EATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 154 ~~~~h~~~V~~l~~spd~~~ 173 (174)
++.+|..+|++++|+|++.-
T Consensus 148 ~~~~h~~~v~~v~~~p~~~~ 167 (330)
T 2hes_X 148 VLQEHSQDVKHVIWHPSEAL 167 (330)
T ss_dssp EECCCSSCEEEEEECSSSSE
T ss_pred EeccCCCceEEEEECCCCCE
Confidence 88999999999999999753
No 13
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.91 E-value=3.1e-23 Score=168.17 Aligned_cols=131 Identities=12% Similarity=0.214 Sum_probs=106.8
Q ss_pred CEEEEecCCcEEEEECCCCCeEE--E--eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKW--E--TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA 76 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~--~--~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~ 76 (174)
+||+|+.|++|+|||+.++.... . ..|...|.+|+|+|++ ++||+|+.|++|+|||+++... ....++.+
T Consensus 30 ~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g---~~l~s~s~D~~v~iw~~~~~~~---~~~~~~~~ 103 (345)
T 3fm0_A 30 LLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCG---NYLASASFDATTCIWKKNQDDF---ECVTTLEG 103 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTS---SEEEEEETTSCEEEEEECCC-E---EEEEEECC
T ss_pred EEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCC---CEEEEEECCCcEEEEEccCCCe---EEEEEccC
Confidence 58999999999999998876432 1 2467889999999974 8999999999999999987532 12346679
Q ss_pred cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeee
Q psy6415 77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEAT 156 (174)
Q Consensus 77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~ 156 (174)
|.. .|++++|+| ++.+||||+.||+|++||++ ++ ...+.+..+.
T Consensus 104 h~~-~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~----------------------------~~------~~~~~~~~~~ 147 (345)
T 3fm0_A 104 HEN-EVKSVAWAP-SGNLLATCSRDKSVWVWEVD----------------------------EE------DEYECVSVLN 147 (345)
T ss_dssp CSS-CEEEEEECT-TSSEEEEEETTSCEEEEEEC----------------------------TT------SCEEEEEEEC
T ss_pred CCC-CceEEEEeC-CCCEEEEEECCCeEEEEECC----------------------------CC------CCeEEEEEec
Confidence 999 999999999 56799999999999999991 11 0124577889
Q ss_pred ccccceeeeeeCCCCCC
Q psy6415 157 LSSQPINSLDWSADKLG 173 (174)
Q Consensus 157 ~h~~~V~~l~~spd~~~ 173 (174)
+|..+|++++|+|+++-
T Consensus 148 ~h~~~v~~~~~~p~~~~ 164 (345)
T 3fm0_A 148 SHTQDVKHVVWHPSQEL 164 (345)
T ss_dssp CCCSCEEEEEECSSSSC
T ss_pred CcCCCeEEEEECCCCCE
Confidence 99999999999999864
No 14
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.91 E-value=2.1e-23 Score=173.09 Aligned_cols=125 Identities=14% Similarity=0.268 Sum_probs=108.2
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+||+|+.||+|+|||+.++++...+ .|...|.+|+|+|++ +.|++|+.|++|+|||+++.++. .++.+|..
T Consensus 122 ~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~---~~l~sgs~D~~i~iwd~~~~~~~-----~~~~~h~~ 193 (410)
T 1vyh_C 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG---KLLASCSADMTIKLWDFQGFECI-----RTMHGHDH 193 (410)
T ss_dssp EEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTS---SEEEEEETTSCCCEEETTSSCEE-----ECCCCCSS
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCC---CEEEEEeCCCeEEEEeCCCCcee-----EEEcCCCC
Confidence 4899999999999999999877654 477889999999974 89999999999999999886543 34568999
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS 159 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~ 159 (174)
.|++++|+| ++..|+||+.|++|++||++ . ++.+.++.+|.
T Consensus 194 -~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~----------------------------~---------~~~~~~~~~h~ 234 (410)
T 1vyh_C 194 -NVSSVSIMP-NGDHIVSASRDKTIKMWEVQ----------------------------T---------GYCVKTFTGHR 234 (410)
T ss_dssp -CEEEEEECS-SSSEEEEEETTSEEEEEETT----------------------------T---------CCEEEEEECCS
T ss_pred -CEEEEEEeC-CCCEEEEEeCCCeEEEEECC----------------------------C---------CcEEEEEeCCC
Confidence 999999999 56789999999999999991 1 24678889999
Q ss_pred cceeeeeeCCCCC
Q psy6415 160 QPINSLDWSADKL 172 (174)
Q Consensus 160 ~~V~~l~~spd~~ 172 (174)
..|+++.|+||+.
T Consensus 235 ~~v~~~~~~~~g~ 247 (410)
T 1vyh_C 235 EWVRMVRPNQDGT 247 (410)
T ss_dssp SCEEEEEECTTSS
T ss_pred ccEEEEEECCCCC
Confidence 9999999999985
No 15
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.90 E-value=6.6e-23 Score=164.57 Aligned_cols=126 Identities=17% Similarity=0.262 Sum_probs=106.5
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+|+||+.|++|+|||++++++...+ .|...|.+++|+|++ +.|++|+.|++|+|||++.. ...++.+|..
T Consensus 79 ~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~s~D~~i~vwd~~~~------~~~~~~~h~~ 149 (319)
T 3frx_A 79 YALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKA---SMIISGSRDKTIKVWTIKGQ------CLATLLGHND 149 (319)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS---CEEEEEETTSCEEEEETTSC------EEEEECCCSS
T ss_pred EEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCC---CEEEEEeCCCeEEEEECCCC------eEEEEeccCC
Confidence 4799999999999999999877654 577889999999974 89999999999999999753 2345568999
Q ss_pred CcEEEEEEcCC-----CCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeee
Q psy6415 80 TTVWAAKHLPQ-----NRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQE 154 (174)
Q Consensus 80 ~~i~~v~fsP~-----~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~ 154 (174)
.|.+++|+|. +..+|++|+.|++|++||+ . +.++...
T Consensus 150 -~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~-----------------------------~--------~~~~~~~ 191 (319)
T 3frx_A 150 -WVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNL-----------------------------N--------QFQIEAD 191 (319)
T ss_dssp -CEEEEEECCC------CCEEEEEETTSCEEEEET-----------------------------T--------TTEEEEE
T ss_pred -cEEEEEEccCCCCCCCccEEEEEeCCCEEEEEEC-----------------------------C--------cchhhee
Confidence 9999999995 2348999999999999999 1 1246778
Q ss_pred eeccccceeeeeeCCCCCC
Q psy6415 155 ATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 155 ~~~h~~~V~~l~~spd~~~ 173 (174)
+.+|..+|++++||||++-
T Consensus 192 ~~~h~~~v~~~~~sp~g~~ 210 (319)
T 3frx_A 192 FIGHNSNINTLTASPDGTL 210 (319)
T ss_dssp ECCCCSCEEEEEECTTSSE
T ss_pred ecCCCCcEEEEEEcCCCCE
Confidence 8899999999999999863
No 16
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.90 E-value=8.9e-23 Score=162.13 Aligned_cols=133 Identities=17% Similarity=0.210 Sum_probs=104.6
Q ss_pred CEEEEecCCcEEEEECCCCC--eEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMS--LKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH 77 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~--~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h 77 (174)
+||||+.||+|+|||+++++ .... ..|...|++++|+|+. .++.|++++.|++|+|||+++.... ....+.+|
T Consensus 69 ~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~g~~l~s~s~d~~v~~wd~~~~~~~---~~~~~~~h 144 (297)
T 2pm7_B 69 ILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHE-YGPMLLVASSDGKVSVVEFKENGTT---SPIIIDAH 144 (297)
T ss_dssp EEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGG-GCSEEEEEETTSEEEEEEBCSSSCB---CCEEEECC
T ss_pred EEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCC-CCcEEEEEECCCcEEEEEecCCCce---eeeeeecc
Confidence 48999999999999998874 2222 3467889999999962 1378999999999999999875321 12345689
Q ss_pred CcCcEEEEEEcCCC------------CCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccc
Q psy6415 78 KATTVWAAKHLPQN------------RDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGV 145 (174)
Q Consensus 78 ~~~~i~~v~fsP~~------------~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~ 145 (174)
.. .|++++|+|.. +.+||+|+.||+|+|||+. .+.
T Consensus 145 ~~-~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~----------------------------~~~---- 191 (297)
T 2pm7_B 145 AI-GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN----------------------------SDA---- 191 (297)
T ss_dssp SS-CEEEEEECCCC------------CCEEEEEETTSCEEEEEEE----------------------------TTT----
T ss_pred cC-ccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEc----------------------------CCC----
Confidence 98 99999999952 4689999999999999991 110
Q ss_pred ccccceeeeeeccccceeeeeeCCCC
Q psy6415 146 PGSLTLLQEATLSSQPINSLDWSADK 171 (174)
Q Consensus 146 ~~~~~ll~~~~~h~~~V~~l~~spd~ 171 (174)
...+++.++.+|..+|++++|||++
T Consensus 192 -~~~~~~~~l~~H~~~V~~v~~sp~~ 216 (297)
T 2pm7_B 192 -QTYVLESTLEGHSDWVRDVAWSPTV 216 (297)
T ss_dssp -TEEEEEEEECCCSSCEEEEEECCCC
T ss_pred -ceEEEEEEecCCCCceEEEEECCCC
Confidence 0123677899999999999999985
No 17
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.90 E-value=8.3e-23 Score=166.86 Aligned_cols=130 Identities=16% Similarity=0.175 Sum_probs=108.9
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+|++|+.||+|++||++++++...+. |...|++|+|+|++ ...+++++.|++|+|||+++.++...+ ....|..
T Consensus 153 ~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~--~~~~~s~~~dg~v~~wd~~~~~~~~~~---~~~~~~~ 227 (357)
T 4g56_B 153 QAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGK--DTIFLSCGEDGRILLWDTRKPKPATRI---DFCASDT 227 (357)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTC--SSCEEEEETTSCEEECCTTSSSCBCBC---CCTTCCS
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCC--CceeeeeccCCceEEEECCCCceeeee---eeccccc
Confidence 48999999999999999998876654 67889999999974 357899999999999999987654322 2335666
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS 159 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~ 159 (174)
.+.+++|+|+++.+||+|+.|++|++||+. +.+++.++.+|.
T Consensus 228 -~v~~v~~sp~~~~~la~g~~d~~i~~wd~~-------------------------------------~~~~~~~~~~~~ 269 (357)
T 4g56_B 228 -IPTSVTWHPEKDDTFACGDETGNVSLVNIK-------------------------------------NPDSAQTSAVHS 269 (357)
T ss_dssp -CEEEEEECTTSTTEEEEEESSSCEEEEESS-------------------------------------CGGGCEEECCCS
T ss_pred -cccchhhhhcccceEEEeecccceeEEECC-------------------------------------CCcEeEEEeccc
Confidence 899999999888899999999999999991 134678899999
Q ss_pred cceeeeeeCCCCCC
Q psy6415 160 QPINSLDWSADKLG 173 (174)
Q Consensus 160 ~~V~~l~~spd~~~ 173 (174)
.+|++|+||||+..
T Consensus 270 ~~v~~l~~sp~~~~ 283 (357)
T 4g56_B 270 QNITGLAYSYHSSP 283 (357)
T ss_dssp SCEEEEEECSSSSC
T ss_pred eeEEEEEEcCCCCC
Confidence 99999999999853
No 18
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.90 E-value=8e-23 Score=164.73 Aligned_cols=126 Identities=12% Similarity=0.260 Sum_probs=108.2
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+||+|+.||+|++||+++++...... +...|.+++|+|++ +.||+|+.|++|+|||+++.+. +.++.+|..
T Consensus 136 ~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg---~~lasg~~dg~i~iwd~~~~~~-----~~~~~~h~~ 207 (321)
T 3ow8_A 136 YLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDG---KYLASGAIDGIINIFDIATGKL-----LHTLEGHAM 207 (321)
T ss_dssp EEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEE-----EEEECCCSS
T ss_pred EEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCC---CEEEEEcCCCeEEEEECCCCcE-----EEEEcccCC
Confidence 37999999999999999998776544 55679999999974 8999999999999999998653 345678998
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS 159 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~ 159 (174)
+|++++|+| ++.+||+|+.||+|++||++ . .+++.++.+|.
T Consensus 208 -~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~----------------------------~---------~~~~~~~~~h~ 248 (321)
T 3ow8_A 208 -PIRSLTFSP-DSQLLVTASDDGYIKIYDVQ----------------------------H---------ANLAGTLSGHA 248 (321)
T ss_dssp -CCCEEEECT-TSCEEEEECTTSCEEEEETT----------------------------T---------CCEEEEECCCS
T ss_pred -ceeEEEEcC-CCCEEEEEcCCCeEEEEECC----------------------------C---------cceeEEEcCCC
Confidence 999999999 56799999999999999991 1 24678889999
Q ss_pred cceeeeeeCCCCCC
Q psy6415 160 QPINSLDWSADKLG 173 (174)
Q Consensus 160 ~~V~~l~~spd~~~ 173 (174)
.+|.+++|+||++-
T Consensus 249 ~~v~~~~~sp~~~~ 262 (321)
T 3ow8_A 249 SWVLNVAFCPDDTH 262 (321)
T ss_dssp SCEEEEEECTTSSE
T ss_pred CceEEEEECCCCCE
Confidence 99999999999863
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2e-22 Score=162.45 Aligned_cols=131 Identities=14% Similarity=0.179 Sum_probs=99.5
Q ss_pred CEEEEecCCcEEEEECCCC-------CeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee
Q psy6415 1 MVVAGYDNGDLKMFDLKTM-------SLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL 72 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~-------~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~ 72 (174)
+||+|+.|++|+|||++.. ++... ..|...|++|+|+|++ ++||+|+.|++|+|||++..... .....
T Consensus 72 ~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g---~~las~s~D~~v~iwd~~~~~~~-~~~~~ 147 (330)
T 2hes_X 72 LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDG---YYLATCSRDKSVWIWETDESGEE-YECIS 147 (330)
T ss_dssp EEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTS---CEEEEEETTSCEEEEECCTTCCC-CEEEE
T ss_pred EEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCC---CEEEEEeCCCEEEEEeccCCCCC-eEEEE
Confidence 4899999999999999532 22333 3477889999999974 89999999999999999643211 11234
Q ss_pred eecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccccccccee
Q psy6415 73 SEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLL 152 (174)
Q Consensus 73 ~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll 152 (174)
.+.+|.. .|++++|+| ++.+||||+.||+|+|||+. .+ ..+.+
T Consensus 148 ~~~~h~~-~v~~v~~~p-~~~~l~s~s~D~~i~iW~~~----------------------------~~-------~~~~~ 190 (330)
T 2hes_X 148 VLQEHSQ-DVKHVIWHP-SEALLASSSYDDTVRIWKDY----------------------------DD-------DWECV 190 (330)
T ss_dssp EECCCSS-CEEEEEECS-SSSEEEEEETTSCEEEEEEE----------------------------TT-------EEEEE
T ss_pred EeccCCC-ceEEEEECC-CCCEEEEEcCCCeEEEEECC----------------------------CC-------CeeEE
Confidence 5678999 999999999 56799999999999999991 11 12467
Q ss_pred eeeeccccceeeeeeCCCCC
Q psy6415 153 QEATLSSQPINSLDWSADKL 172 (174)
Q Consensus 153 ~~~~~h~~~V~~l~~spd~~ 172 (174)
.++.+|..+|++++|+|++.
T Consensus 191 ~~~~~h~~~v~~~~~~~~~~ 210 (330)
T 2hes_X 191 AVLNGHEGTVWSSDFDKTEG 210 (330)
T ss_dssp EEECCCSSCEEEEEECCSSS
T ss_pred EEccCCCCcEEEEEecCCCC
Confidence 88999999999999999854
No 20
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.90 E-value=1.3e-22 Score=168.43 Aligned_cols=129 Identities=12% Similarity=0.214 Sum_probs=108.5
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCC-----------------CCCEEEEEeCCCcEEEEECCC
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDI-----------------PMNKLVATTLEAKLFVFDLKT 62 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~-----------------~~~~l~s~s~Dg~I~iWD~~~ 62 (174)
+|++|+.||+|++||++++.+.... .|...|.+++|+|+.. .+..|++|+.|++|+|||+++
T Consensus 248 ~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~ 327 (410)
T 1vyh_C 248 LIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327 (410)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT
T ss_pred EEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCC
Confidence 3799999999999999999887654 4678899999998521 146899999999999999998
Q ss_pred cccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCc
Q psy6415 63 LHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIP 142 (174)
Q Consensus 63 ~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~ 142 (174)
..+ +.++.+|.. .|++++|+| ++.+|+||+.||+|++||+. .
T Consensus 328 ~~~-----~~~~~~h~~-~v~~v~~~~-~g~~l~s~s~D~~i~vwd~~----------------------------~--- 369 (410)
T 1vyh_C 328 GMC-----LMTLVGHDN-WVRGVLFHS-GGKFILSCADDKTLRVWDYK----------------------------N--- 369 (410)
T ss_dssp TEE-----EEEEECCSS-CEEEEEECS-SSSCEEEEETTTEEEEECCT----------------------------T---
T ss_pred Cce-----EEEEECCCC-cEEEEEEcC-CCCEEEEEeCCCeEEEEECC----------------------------C---
Confidence 654 345568999 999999999 56688999999999999991 1
Q ss_pred cccccccceeeeeeccccceeeeeeCCCCCC
Q psy6415 143 MGVPGSLTLLQEATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 143 ~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~ 173 (174)
.+++.++.+|..+|.+++|+|+++.
T Consensus 370 ------~~~~~~~~~h~~~v~~l~~~~~~~~ 394 (410)
T 1vyh_C 370 ------KRCMKTLNAHEHFVTSLDFHKTAPY 394 (410)
T ss_dssp ------SCCCEEEECCSSCEEEEEECSSSSC
T ss_pred ------CceEEEEcCCCCcEEEEEEcCCCCE
Confidence 2467888999999999999999864
No 21
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.90 E-value=5.3e-23 Score=168.63 Aligned_cols=130 Identities=16% Similarity=0.116 Sum_probs=98.4
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc-------cc------
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE-------KG------ 68 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~-------~~------ 68 (174)
+|+|+.|++|+|||+++++++....+...|++|+|+|++ ++|++++.|+ +++|+..+.... +.
T Consensus 150 ~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg---~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~v 225 (365)
T 4h5i_A 150 IASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDG---KVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSLSKI 225 (365)
T ss_dssp EEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTS---SEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEEEEE
T ss_pred EEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCC---ceEEecccee-EEEEEeccCcceeeeecCCCCCCEEEE
Confidence 356668999999999999988888888889999999974 7888888655 455554433210 00
Q ss_pred ----------------------------------eeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccc
Q psy6415 69 ----------------------------------FAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALR 114 (174)
Q Consensus 69 ----------------------------------~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~ 114 (174)
.....+.+|.. .|++++|+| ++.+||+|+.|++|+|||++
T Consensus 226 ~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~V~~~~~Sp-dg~~lasgs~D~~V~iwd~~---- 299 (365)
T 4h5i_A 226 NFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFK-GITSMDVDM-KGELAVLASNDNSIALVKLK---- 299 (365)
T ss_dssp EEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCS-CEEEEEECT-TSCEEEEEETTSCEEEEETT----
T ss_pred EEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCC-CeEeEEECC-CCCceEEEcCCCEEEEEECC----
Confidence 00112345777 899999999 56799999999999999991
Q ss_pred ccccccceeeeecCCCCCCcccCCCCCccccccccceeee-eeccccceeeeeeCCCCCCC
Q psy6415 115 ADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQE-ATLSSQPINSLDWSADKLGL 174 (174)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~-~~~h~~~V~~l~~spd~~~~ 174 (174)
+ ++++.+ +.+|..+|++|+|||||+-|
T Consensus 300 ------------------------~---------~~~~~~~~~gH~~~V~~v~fSpdg~~l 327 (365)
T 4h5i_A 300 ------------------------D---------LSMSKIFKQAHSFAITEVTISPDSTYV 327 (365)
T ss_dssp ------------------------T---------TEEEEEETTSSSSCEEEEEECTTSCEE
T ss_pred ------------------------C---------CcEEEEecCcccCCEEEEEECCCCCEE
Confidence 2 345666 58999999999999999743
No 22
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.90 E-value=1.3e-22 Score=164.54 Aligned_cols=131 Identities=11% Similarity=0.125 Sum_probs=105.7
Q ss_pred CEEEEecCCcEEEEECCCCCe--EEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSL--KWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH 77 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~--~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h 77 (174)
+||+|+.|++|+|||++++.. ... ..|...|.+|+|+|++ ++|++|+.|++|+|||+++.... .....+.+|
T Consensus 75 ~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~---~~l~s~s~D~~v~iwd~~~~~~~--~~~~~~~~h 149 (345)
T 3fm0_A 75 YLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSG---NLLATCSRDKSVWVWEVDEEDEY--ECVSVLNSH 149 (345)
T ss_dssp EEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEEECTTSCE--EEEEEECCC
T ss_pred EEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCC---CEEEEEECCCeEEEEECCCCCCe--EEEEEecCc
Confidence 489999999999999987753 333 3477889999999974 89999999999999999875421 123456689
Q ss_pred CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415 78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL 157 (174)
Q Consensus 78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~ 157 (174)
.. .|.+++|+| ++.+||+|+.||+|++||++ .+ ....+.++.+
T Consensus 150 ~~-~v~~~~~~p-~~~~l~s~s~d~~i~~w~~~----------------------------~~-------~~~~~~~~~~ 192 (345)
T 3fm0_A 150 TQ-DVKHVVWHP-SQELLASASYDDTVKLYREE----------------------------ED-------DWVCCATLEG 192 (345)
T ss_dssp CS-CEEEEEECS-SSSCEEEEETTSCEEEEEEE----------------------------TT-------EEEEEEEECC
T ss_pred CC-CeEEEEECC-CCCEEEEEeCCCcEEEEEec----------------------------CC-------CEEEEEEecC
Confidence 98 999999999 46689999999999999991 11 1124678899
Q ss_pred cccceeeeeeCCCCCC
Q psy6415 158 SSQPINSLDWSADKLG 173 (174)
Q Consensus 158 h~~~V~~l~~spd~~~ 173 (174)
|..+|++|+||||++.
T Consensus 193 h~~~v~~l~~sp~g~~ 208 (345)
T 3fm0_A 193 HESTVWSLAFDPSGQR 208 (345)
T ss_dssp CSSCEEEEEECTTSSE
T ss_pred CCCceEEEEECCCCCE
Confidence 9999999999999864
No 23
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.90 E-value=8.8e-23 Score=175.96 Aligned_cols=164 Identities=9% Similarity=0.032 Sum_probs=110.9
Q ss_pred CEEEEecCCcEEEEECCCCCeE-----------EE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLK-----------WE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKG 68 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~-----------~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~ 68 (174)
+||||+.||+|+|||++++... .. ..|...|.+++|+|+ +.|++|+.||+|+|||+++...
T Consensus 227 ~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~----~~lasgs~DgtV~lWD~~~~~~--- 299 (524)
T 2j04_B 227 CLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP----TTVVCGFKNGFVAEFDLTDPEV--- 299 (524)
T ss_dssp EEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS----SEEEEEETTSEEEEEETTBCSS---
T ss_pred eEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC----CeEEEEeCCCEEEEEECCCCCC---
Confidence 4899999999999999876421 12 235678999999974 6899999999999999987532
Q ss_pred eeeeeecccCcCcEEEE--EEcCCCCCEEEEEcCCCcEEEEeccccccccc-cccc--eeeeecCC-CCCCcccC--CCC
Q psy6415 69 FAYLSEKAHKATTVWAA--KHLPQNRDLFVTCGGSGSLNLWQLVSALRADT-NLCS--IFRYSSNY-PTQRTKPD--IDD 140 (174)
Q Consensus 69 ~~~~~~~~h~~~~i~~v--~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~-~~~~--~~~~~~~~-~~~~~~~~--~dg 140 (174)
....+.+|.. .|++| +|+|++..+|||||.||+|+|||+.+...... .++. .......| |+...++. .|+
T Consensus 300 -~~~~~~~H~~-~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~ 377 (524)
T 2j04_B 300 -PSFYDQVHDS-YILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGAS 377 (524)
T ss_dssp -CSEEEECSSS-CEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSS
T ss_pred -ceEEeecccc-cEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCC
Confidence 1234568999 99999 56774337999999999999999943100000 0000 00112233 43332222 222
Q ss_pred Ccccc--ccccceeeeeeccccceeeeeeCCCCCCC
Q psy6415 141 IPMGV--PGSLTLLQEATLSSQPINSLDWSADKLGL 174 (174)
Q Consensus 141 ~~~~~--~~~~~ll~~~~~h~~~V~~l~~spd~~~~ 174 (174)
.+.+ ...++.+.++.+|..+|++|+||||++.|
T Consensus 378 -tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l 412 (524)
T 2j04_B 378 -SLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMV 412 (524)
T ss_dssp -EEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBC
T ss_pred -cEEEEECcccccceeeecCCCceEEEEeCCCCCeE
Confidence 1111 23345678889999999999999999754
No 24
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.89 E-value=3.1e-22 Score=158.85 Aligned_cols=126 Identities=17% Similarity=0.257 Sum_probs=107.7
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+||+|+.||+|++||+.+++..... .|...|.+++|+|++ +.|++++.|++|+|||+++.++. ..+.+|..
T Consensus 37 ~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~~~d~~i~vwd~~~~~~~-----~~~~~~~~ 108 (312)
T 4ery_A 37 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS---NLLVSASDDKTLKIWDVSSGKCL-----KTLKGHSN 108 (312)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTCCEE-----EEEECCSS
T ss_pred EEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCC---CEEEEECCCCEEEEEECCCCcEE-----EEEcCCCC
Confidence 3899999999999999988876654 467889999999974 89999999999999999986543 34568988
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS 159 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~ 159 (174)
.|++++|+| ++.+|++|+.||+|++||++ . ++.+..+.+|.
T Consensus 109 -~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~----------------------------~---------~~~~~~~~~~~ 149 (312)
T 4ery_A 109 -YVFCCNFNP-QSNLIVSGSFDESVRIWDVK----------------------------T---------GKCLKTLPAHS 149 (312)
T ss_dssp -CEEEEEECS-SSSEEEEEETTSCEEEEETT----------------------------T---------CCEEEEECCCS
T ss_pred -CEEEEEEcC-CCCEEEEEeCCCcEEEEECC----------------------------C---------CEEEEEecCCC
Confidence 999999999 56799999999999999991 1 24577888999
Q ss_pred cceeeeeeCCCCCC
Q psy6415 160 QPINSLDWSADKLG 173 (174)
Q Consensus 160 ~~V~~l~~spd~~~ 173 (174)
.+|.+++|+|+++-
T Consensus 150 ~~v~~~~~~~~~~~ 163 (312)
T 4ery_A 150 DPVSAVHFNRDGSL 163 (312)
T ss_dssp SCEEEEEECTTSSE
T ss_pred CcEEEEEEcCCCCE
Confidence 99999999999863
No 25
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.89 E-value=2.4e-22 Score=171.04 Aligned_cols=125 Identities=16% Similarity=0.284 Sum_probs=105.4
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
+||+|+.|++|++||+....+.....|...|.+++|+|++ ..||+++.|++|+|||... + ...++.+|..
T Consensus 440 ~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~---~~las~~~d~~i~iw~~~~-~-----~~~~~~~h~~- 509 (577)
T 2ymu_A 440 TIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDG---QTIASASDDKTVKLWNRNG-Q-----LLQTLTGHSS- 509 (577)
T ss_dssp EEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTS---CEEEEEETTSEEEEEETTS-C-----EEEEEECCSS-
T ss_pred EEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCC---CEEEEEeCCCEEEEEcCCC-C-----EEEEEeCCCC-
Confidence 4789999999999998654444445678899999999974 8999999999999999643 2 2345679999
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ 160 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~ 160 (174)
.|.+++|+| ++.+||+++.||+|+|||+ +| +++.++.+|+.
T Consensus 510 ~v~~l~~s~-dg~~l~s~~~dg~v~lwd~-----------------------------~~---------~~~~~~~~h~~ 550 (577)
T 2ymu_A 510 SVRGVAFSP-DGQTIASASDDKTVKLWNR-----------------------------NG---------QLLQTLTGHSS 550 (577)
T ss_dssp CEEEEEECT-TSSCEEEEETTSEEEEECT-----------------------------TS---------CEEEEEECCSS
T ss_pred CEEEEEEcC-CCCEEEEEECcCEEEEEeC-----------------------------CC---------CEEEEEcCCCC
Confidence 999999999 5668999999999999999 32 46889999999
Q ss_pred ceeeeeeCCCCCCC
Q psy6415 161 PINSLDWSADKLGL 174 (174)
Q Consensus 161 ~V~~l~~spd~~~~ 174 (174)
+|++++||||++-|
T Consensus 551 ~v~~~~fs~dg~~l 564 (577)
T 2ymu_A 551 SVWGVAFSPDGQTI 564 (577)
T ss_dssp CEEEEEECTTSSCE
T ss_pred CEEEEEEcCCCCEE
Confidence 99999999999754
No 26
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.89 E-value=4.4e-22 Score=160.90 Aligned_cols=104 Identities=17% Similarity=0.288 Sum_probs=84.4
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc-------c-----
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE-------K----- 67 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~-------~----- 67 (174)
+|+||+.|++|+|||++++++...+ .|...|++++|+|++ +.|++++.|++|+|||++..... +
T Consensus 90 ~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~---~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~ 166 (343)
T 2xzm_R 90 FAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDN---RQILSAGAEREIKLWNILGECKFSSAEKENHSDWVS 166 (343)
T ss_dssp EEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSST---TEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEE
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCC---CEEEEEcCCCEEEEEeccCCceeeeecccCCCceee
Confidence 3789999999999999999877654 477889999999974 89999999999999998632100 0
Q ss_pred ------------------ce------------------eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 68 ------------------GF------------------AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 68 ------------------~~------------------~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+ ....+.+|.. .|++++|+| ++.+||||+.||+|++||+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~-~v~~~~~s~-~g~~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 167 CVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHES-NVNHLSISP-NGKYIATGGKDKKLLIWDI 242 (343)
T ss_dssp EEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSS-CEEEEEECT-TSSEEEEEETTCEEEEEES
T ss_pred eeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccc-cceEEEECC-CCCEEEEEcCCCeEEEEEC
Confidence 00 1123457888 999999999 5679999999999999999
No 27
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.89 E-value=1.2e-22 Score=169.23 Aligned_cols=128 Identities=14% Similarity=0.168 Sum_probs=101.7
Q ss_pred CEEEEecCCcEEEEECCCCCeEEE---eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWE---TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH 77 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~---~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h 77 (174)
+||+|+.||+|+|||+.++..... ..|...|++|+|+|.+ +++|+|||.|++|+|||+++.... . ......+
T Consensus 134 ~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~--~~~l~s~s~D~~v~iwd~~~~~~~-~--~~~~~~~ 208 (435)
T 4e54_B 134 TVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLN--TNQFYASSMEGTTRLQDFKGNILR-V--FASSDTI 208 (435)
T ss_dssp CEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSC--TTEEEEECSSSCEEEEETTSCEEE-E--EECCSSC
T ss_pred EEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCC--CCEEEEEeCCCEEEEeeccCCcee-E--EeccCCC
Confidence 589999999999999987764332 3477899999999853 489999999999999999875321 1 1111233
Q ss_pred CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415 78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL 157 (174)
Q Consensus 78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~ 157 (174)
.. .+.+++|+| ++.+||+|+.||+|++||+ +| +.+.++.+
T Consensus 209 ~~-~~~~~~~~~-~~~~l~~g~~dg~i~~wd~-----------------------------~~---------~~~~~~~~ 248 (435)
T 4e54_B 209 NI-WFCSLDVSA-SSRMVVTGDNVGNVILLNM-----------------------------DG---------KELWNLRM 248 (435)
T ss_dssp SC-CCCCEEEET-TTTEEEEECSSSBEEEEES-----------------------------SS---------CBCCCSBC
T ss_pred Cc-cEEEEEECC-CCCEEEEEeCCCcEeeecc-----------------------------Cc---------ceeEEEec
Confidence 44 678999999 5679999999999999999 22 34677889
Q ss_pred cccceeeeeeCCCCCC
Q psy6415 158 SSQPINSLDWSADKLG 173 (174)
Q Consensus 158 h~~~V~~l~~spd~~~ 173 (174)
|..+|++|+|+|+++.
T Consensus 249 h~~~v~~v~~~p~~~~ 264 (435)
T 4e54_B 249 HKKKVTHVALNPCCDW 264 (435)
T ss_dssp CSSCEEEEEECTTCSS
T ss_pred ccceEEeeeecCCCce
Confidence 9999999999999864
No 28
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.89 E-value=5.4e-22 Score=157.58 Aligned_cols=140 Identities=12% Similarity=0.130 Sum_probs=103.1
Q ss_pred CEEEEecCCcEEEEECCCCC---eEEEeecCCCEEEEEecCCCC----------CCCEEEEEeCCCcEEEEECCCccccc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMS---LKWETNLKNGVCGVDFDRRDI----------PMNKLVATTLEAKLFVFDLKTLHREK 67 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~---~~~~~~~~~~V~sv~f~~~~~----------~~~~l~s~s~Dg~I~iWD~~~~~~~~ 67 (174)
+||+|+.||+|++||++++. ......|...|++++|+|+.. +++.||+|+.|++|+|||+++.....
T Consensus 115 ~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~ 194 (297)
T 2pm7_B 115 MLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY 194 (297)
T ss_dssp EEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEE
T ss_pred EEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceE
Confidence 48999999999999998763 222345778899999999621 13689999999999999998754211
Q ss_pred ceeeeeecccCcCcEEEEEEcCCC--CCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccc
Q psy6415 68 GFAYLSEKAHKATTVWAAKHLPQN--RDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGV 145 (174)
Q Consensus 68 ~~~~~~~~~h~~~~i~~v~fsP~~--~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~ 145 (174)
....++.+|.. .|++|+|+|++ +.+||||+.|++|+|||+++ . .+..
T Consensus 195 -~~~~~l~~H~~-~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~----~----------------------~~~~--- 243 (297)
T 2pm7_B 195 -VLESTLEGHSD-WVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN----E----------------------QGPW--- 243 (297)
T ss_dssp -EEEEEECCCSS-CEEEEEECCCCSSSEEEEEEETTSCEEEEEESS----T----------------------TSCC---
T ss_pred -EEEEEecCCCC-ceEEEEECCCCCCceEEEEEECCCcEEEEEeCC----C----------------------CCcc---
Confidence 12346679999 99999999964 57999999999999999911 0 0000
Q ss_pred ccccceeeeeeccccceeeeeeCCCCCCC
Q psy6415 146 PGSLTLLQEATLSSQPINSLDWSADKLGL 174 (174)
Q Consensus 146 ~~~~~ll~~~~~h~~~V~~l~~spd~~~~ 174 (174)
...+....+|..+|++++||||++-|
T Consensus 244 ---~~~~~~~~~~~~~v~~~~~s~~g~~l 269 (297)
T 2pm7_B 244 ---KKTLLKEEKFPDVLWRASWSLSGNVL 269 (297)
T ss_dssp ---EEEESSSSCCSSCEEEEEECSSSCCE
T ss_pred ---ceeeeecccCCCcEEEEEECCCCCEE
Confidence 00111225788999999999998753
No 29
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.89 E-value=7.5e-22 Score=155.46 Aligned_cols=170 Identities=13% Similarity=0.133 Sum_probs=109.0
Q ss_pred CEEEEecCCcEEEEECCCCC---------eEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccce-
Q psy6415 1 MVVAGYDNGDLKMFDLKTMS---------LKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGF- 69 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~---------~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~- 69 (174)
+|++|+.||+|++||+++++ .... ..|...|.+++|+|+. .++.|++++.|++|+|||+++.+....+
T Consensus 73 ~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 151 (351)
T 3f3f_A 73 IIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAH-LGLKLACLGNDGILRLYDALEPSDLRSWT 151 (351)
T ss_dssp EEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGG-GCSEEEEEETTCEEEEEECSSTTCTTCCE
T ss_pred EEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCC-CCcEEEEecCCCcEEEecCCChHHhcccc
Confidence 48999999999999998863 2333 3467889999999961 1389999999999999999876532211
Q ss_pred ------------------------------------------------------eeeeecccCcCcEEEEEEcCCCC---
Q psy6415 70 ------------------------------------------------------AYLSEKAHKATTVWAAKHLPQNR--- 92 (174)
Q Consensus 70 ------------------------------------------------------~~~~~~~h~~~~i~~v~fsP~~~--- 92 (174)
....+.+|.. .|++++|+|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~i~~~~~~p~~~~~~ 230 (351)
T 3f3f_A 152 LTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKS-LIRSISWAPSIGRWY 230 (351)
T ss_dssp EEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCS-CEEEEEECCCSSCSS
T ss_pred ccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCc-ceeEEEECCCCCCcc
Confidence 1234557888 999999999642
Q ss_pred CEEEEEcCCCcEEEEeccccccccccccceeeee--cCC-CCCCcccC--CCCCccc-----cccccceeeeeeccccce
Q psy6415 93 DLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYS--SNY-PTQRTKPD--IDDIPMG-----VPGSLTLLQEATLSSQPI 162 (174)
Q Consensus 93 ~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~--~dg~~~~-----~~~~~~ll~~~~~h~~~V 162 (174)
.+||+|+.||+|++||+.+..+..... ...... ... +....... .++.... ...+.+++.++.+|..+|
T Consensus 231 ~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 309 (351)
T 3f3f_A 231 QLIATGCKDGRIRIFKITEKLSPLASE-ESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEV 309 (351)
T ss_dssp EEEEEEETTSCEEEEEEEECC----------------------------------------CCSEEEEEEEEECTTSSCE
T ss_pred eEEEEEcCCCeEEEEeCCCCcCccccC-CcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccE
Confidence 699999999999999994311100000 000000 000 00000000 0000000 012346889999999999
Q ss_pred eeeeeCCCCCC
Q psy6415 163 NSLDWSADKLG 173 (174)
Q Consensus 163 ~~l~~spd~~~ 173 (174)
++++|+||++-
T Consensus 310 ~~~~~s~~~~~ 320 (351)
T 3f3f_A 310 WSVSWNLTGTI 320 (351)
T ss_dssp EEEEECSSSCC
T ss_pred EEEEEcCCCCE
Confidence 99999999864
No 30
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.89 E-value=5.4e-22 Score=163.49 Aligned_cols=133 Identities=11% Similarity=0.178 Sum_probs=102.1
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+||+|+.||+|+|||++++++.... .|...|++++|+|++ +.|++++.|++|+|||+++.++.. .+ .+..
T Consensus 137 ~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~---~~l~s~s~d~~v~iwd~~~~~~~~-----~~-~~~~ 207 (393)
T 1erj_A 137 FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG---DKLVSGSGDRTVRIWDLRTGQCSL-----TL-SIED 207 (393)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTTEEEE-----EE-ECSS
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCC---CEEEEecCCCcEEEEECCCCeeEE-----EE-EcCC
Confidence 4899999999999999998876654 477889999999974 899999999999999999865432 22 3556
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS 159 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~ 159 (174)
.+.+++|+|.++.+||+|+.||+|++||+++ |..+... ........+|.
T Consensus 208 -~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~----------------------------~~~~~~~--~~~~~~~~~h~ 256 (393)
T 1erj_A 208 -GVTTVAVSPGDGKYIAAGSLDRAVRVWDSET----------------------------GFLVERL--DSENESGTGHK 256 (393)
T ss_dssp -CEEEEEECSTTCCEEEEEETTSCEEEEETTT----------------------------CCEEEEE--C------CCCS
T ss_pred -CcEEEEEECCCCCEEEEEcCCCcEEEEECCC----------------------------CcEEEee--cccccCCCCCC
Confidence 7999999997778999999999999999911 1000000 00012236899
Q ss_pred cceeeeeeCCCCCC
Q psy6415 160 QPINSLDWSADKLG 173 (174)
Q Consensus 160 ~~V~~l~~spd~~~ 173 (174)
.+|++++|+||++.
T Consensus 257 ~~v~~v~~~~~g~~ 270 (393)
T 1erj_A 257 DSVYSVVFTRDGQS 270 (393)
T ss_dssp SCEEEEEECTTSSE
T ss_pred CCEEEEEECCCCCE
Confidence 99999999999864
No 31
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.89 E-value=6e-22 Score=172.07 Aligned_cols=167 Identities=14% Similarity=0.169 Sum_probs=111.8
Q ss_pred EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceee--eeecccC
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAY--LSEKAHK 78 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~--~~~~~h~ 78 (174)
||+|+.|++|++||.+++++...+ .|...|++|+|+|++ +.||+|+.|++|+|||+++.++...+.. ....+|.
T Consensus 163 l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg---~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~ 239 (611)
T 1nr0_A 163 IISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDG---SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS 239 (611)
T ss_dssp EEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSS
T ss_pred EEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCC---CEEEEEECCCcEEEEECCCCcEeeeeccccccccccC
Confidence 899999999999999988776654 477889999999974 8999999999999999988664322110 0011799
Q ss_pred cCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccc-c---ccceeeeecCC-CCCCcccCCCCCcccc-cccccee
Q psy6415 79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADT-N---LCSIFRYSSNY-PTQRTKPDIDDIPMGV-PGSLTLL 152 (174)
Q Consensus 79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~-~---~~~~~~~~~~~-~~~~~~~~~dg~~~~~-~~~~~ll 152 (174)
. .|++++|+| ++.+||||+.|++|+|||+++.....+ + ......+...+ +........||..... ....+.+
T Consensus 240 ~-~V~~v~~sp-dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~ 317 (611)
T 1nr0_A 240 G-SVFGLTWSP-DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSID 317 (611)
T ss_dssp S-CEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEE
T ss_pred C-CEEEEEECC-CCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcc
Confidence 8 999999999 567999999999999999943110000 0 00000000000 0000001123311100 1223466
Q ss_pred eeeeccccceeeeeeCCCCCC
Q psy6415 153 QEATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 153 ~~~~~h~~~V~~l~~spd~~~ 173 (174)
..+.+|..+|++++|||||+-
T Consensus 318 ~~~~gh~~~v~~l~~spdg~~ 338 (611)
T 1nr0_A 318 QVRYGHNKAITALSSSADGKT 338 (611)
T ss_dssp EEECCCSSCEEEEEECTTSSE
T ss_pred eEEcCCCCCEEEEEEeCCCCE
Confidence 788899999999999999863
No 32
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.89 E-value=7.5e-22 Score=160.86 Aligned_cols=127 Identities=16% Similarity=0.228 Sum_probs=101.6
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe-------------------------------------------------ecCCCE
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET-------------------------------------------------NLKNGV 31 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~-------------------------------------------------~~~~~V 31 (174)
+||||+.||+|+|||..++...... .|...|
T Consensus 78 ~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v 157 (354)
T 2pbi_B 78 RIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYL 157 (354)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCE
T ss_pred EEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcE
Confidence 3789999999999998766543211 244567
Q ss_pred EEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCC-CCCEEEEEcCCCcEEEEecc
Q psy6415 32 CGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQ-NRDLFVTCGGSGSLNLWQLV 110 (174)
Q Consensus 32 ~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~-~~~~las~s~Dg~V~lWd~~ 110 (174)
.+++|+|++ ..|++++.|++|+|||+++.++ +.++.+|.. .|.+++|+|. ++.+|+||+.||+|++||++
T Consensus 158 ~~~~~~~~~---~~l~t~s~D~~v~lwd~~~~~~-----~~~~~~h~~-~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~ 228 (354)
T 2pbi_B 158 SACSFTNSD---MQILTASGDGTCALWDVESGQL-----LQSFHGHGA-DVLCLDLAPSETGNTFVSGGCDKKAMVWDMR 228 (354)
T ss_dssp EEEEECSSS---SEEEEEETTSEEEEEETTTCCE-----EEEEECCSS-CEEEEEECCCSSCCEEEEEETTSCEEEEETT
T ss_pred EEEEEeCCC---CEEEEEeCCCcEEEEeCCCCeE-----EEEEcCCCC-CeEEEEEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 888888864 7899999999999999998654 345568998 9999999985 35799999999999999991
Q ss_pred ccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCCCC
Q psy6415 111 SALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~ 173 (174)
. ++.+.++.+|..+|++++|+|++..
T Consensus 229 ----------------------------~---------~~~~~~~~~h~~~v~~v~~~p~~~~ 254 (354)
T 2pbi_B 229 ----------------------------S---------GQCVQAFETHESDVNSVRYYPSGDA 254 (354)
T ss_dssp ----------------------------T---------CCEEEEECCCSSCEEEEEECTTSSE
T ss_pred ----------------------------C---------CcEEEEecCCCCCeEEEEEeCCCCE
Confidence 1 2467888999999999999999863
No 33
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.88 E-value=4.3e-22 Score=159.80 Aligned_cols=123 Identities=10% Similarity=0.150 Sum_probs=101.8
Q ss_pred CEEEEecCCcEEEEECCCCC-----eEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee
Q psy6415 1 MVVAGYDNGDLKMFDLKTMS-----LKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE 74 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~-----~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~ 74 (174)
+|+||+.|++|++||+.+.. .... ..|...|.+++|+|++ ++|++|+.|++|+|||++++++ ...+
T Consensus 32 ~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg---~~l~s~s~D~~v~~wd~~~~~~-----~~~~ 103 (319)
T 3frx_A 32 LLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADG---AYALSASWDKTLRLWDVATGET-----YQRF 103 (319)
T ss_dssp EEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTTEE-----EEEE
T ss_pred EEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCC---CEEEEEeCCCEEEEEECCCCCe-----eEEE
Confidence 48999999999999986432 1222 3577899999999974 8999999999999999998754 3455
Q ss_pred cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeee
Q psy6415 75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQE 154 (174)
Q Consensus 75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~ 154 (174)
.+|.. .|++++|+| ++.+|+||+.||+|++||+ .| +.+.+
T Consensus 104 ~~h~~-~v~~~~~~~-~~~~l~s~s~D~~i~vwd~-----------------------------~~---------~~~~~ 143 (319)
T 3frx_A 104 VGHKS-DVMSVDIDK-KASMIISGSRDKTIKVWTI-----------------------------KG---------QCLAT 143 (319)
T ss_dssp ECCSS-CEEEEEECT-TSCEEEEEETTSCEEEEET-----------------------------TS---------CEEEE
T ss_pred ccCCC-cEEEEEEcC-CCCEEEEEeCCCeEEEEEC-----------------------------CC---------CeEEE
Confidence 68999 999999999 5679999999999999999 21 24677
Q ss_pred eeccccceeeeeeCCCC
Q psy6415 155 ATLSSQPINSLDWSADK 171 (174)
Q Consensus 155 ~~~h~~~V~~l~~spd~ 171 (174)
+.+|..+|.++.|+|+.
T Consensus 144 ~~~h~~~v~~~~~~~~~ 160 (319)
T 3frx_A 144 LLGHNDWVSQVRVVPNE 160 (319)
T ss_dssp ECCCSSCEEEEEECCC-
T ss_pred EeccCCcEEEEEEccCC
Confidence 88999999999999964
No 34
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.88 E-value=4.1e-23 Score=178.03 Aligned_cols=162 Identities=11% Similarity=0.027 Sum_probs=104.0
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe-ecC--CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET-NLK--NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH 77 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~--~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h 77 (174)
+||||+.|++|||||++++++.... .+. ..|.+|+|+|++ +.|++++.|++|+|||+++..+. .++.+|
T Consensus 325 ~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~---~~l~s~~~d~tv~lwd~~~~~~~-----~~l~gH 396 (524)
T 2j04_B 325 VVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQI---YSYIYSDGASSLRAVPSRAAFAV-----HPLVSR 396 (524)
T ss_dssp EEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTT---TEEEEECSSSEEEEEETTCTTCC-----EEEEEC
T ss_pred EEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCc---CeEEEeCCCCcEEEEECcccccc-----eeeecC
Confidence 4799999999999999987654332 232 248899999974 78999999999999999986543 345689
Q ss_pred CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccccc-cc----ccceeeeecCC-CCCCcccCCCCCcccc-ccccc
Q psy6415 78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRAD-TN----LCSIFRYSSNY-PTQRTKPDIDDIPMGV-PGSLT 150 (174)
Q Consensus 78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~-~~----~~~~~~~~~~~-~~~~~~~~~dg~~~~~-~~~~~ 150 (174)
.. .|++|+|||+ +.+||||+.||+|+|||+....-.. +. ....+.+..++ |++....-.++-.+.. ..+++
T Consensus 397 ~~-~V~sva~Sp~-g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~ 474 (524)
T 2j04_B 397 ET-TITAIGVSRL-HPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDV 474 (524)
T ss_dssp SS-CEEEEECCSS-CCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC------
T ss_pred CC-ceEEEEeCCC-CCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCc
Confidence 99 9999999995 5688999999999999983311110 00 01112334455 4332111111100000 01345
Q ss_pred eeeeeeccccceeeeeeCCCCC
Q psy6415 151 LLQEATLSSQPINSLDWSADKL 172 (174)
Q Consensus 151 ll~~~~~h~~~V~~l~~spd~~ 172 (174)
++.++.+|..+|++++|||+++
T Consensus 475 ~~~~l~gh~~~V~~Vafsp~~~ 496 (524)
T 2j04_B 475 SKAKIDAHGINITCTKWNETSA 496 (524)
T ss_dssp -------CCCSCCCEEECCSTT
T ss_pred ceeeecCCCceEEEEECCCCCC
Confidence 7889999999999999999975
No 35
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.88 E-value=3.2e-22 Score=164.18 Aligned_cols=136 Identities=18% Similarity=0.202 Sum_probs=96.6
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCC--------------------------------------
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDI-------------------------------------- 41 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~-------------------------------------- 41 (174)
+||||+.||+|+|||+.+++..... .|...|.+++|+|++.
T Consensus 80 ~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~ 159 (380)
T 3iz6_a 80 WIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGY 159 (380)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSC
T ss_pred EEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcc
Confidence 4899999999999999888765543 3445566666666430
Q ss_pred ---------CCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccc
Q psy6415 42 ---------PMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSA 112 (174)
Q Consensus 42 ---------~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~ 112 (174)
....|++|+.|++|+|||+++.++...+......+|.. .|.+++|+|.++.+|+||+.||+|++||+
T Consensus 160 v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~sgs~D~~v~~wd~--- 235 (380)
T 3iz6_a 160 ASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTA-DVLSLSINSLNANMFISGSCDTTVRLWDL--- 235 (380)
T ss_dssp CCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCS-CEEEEEECSSSCCEEEEEETTSCEEEEET---
T ss_pred eEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCcc-CeEEEEeecCCCCEEEEEECCCeEEEEEC---
Confidence 02346666666666666666554332111111247888 99999999877889999999999999999
Q ss_pred ccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCCCC
Q psy6415 113 LRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~ 173 (174)
| . ..+.+.++.+|..+|++++|+||++-
T Consensus 236 -~------------------------~--------~~~~~~~~~~h~~~v~~v~~~p~~~~ 263 (380)
T 3iz6_a 236 -R------------------------I--------TSRAVRTYHGHEGDINSVKFFPDGQR 263 (380)
T ss_dssp -T------------------------T--------TCCCCEEECCCSSCCCEEEECTTSSE
T ss_pred -C------------------------C--------CCcceEEECCcCCCeEEEEEecCCCe
Confidence 1 0 01357788999999999999999863
No 36
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.88 E-value=4.1e-21 Score=152.33 Aligned_cols=164 Identities=13% Similarity=0.132 Sum_probs=114.0
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+|++|+.||+|++||++++++..... |...|.+++|+|++ +.|++++.|+.|++||+++.++...+ ...|..
T Consensus 121 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~----~~~~~~ 193 (312)
T 4ery_A 121 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG---SLIVSSSYDGLCRIWDTASGQCLKTL----IDDDNP 193 (312)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTCCEEEEE----CCSSCC
T ss_pred EEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCC---CEEEEEeCCCcEEEEECCCCceeeEE----eccCCC
Confidence 47999999999999999998776654 66789999999974 89999999999999999986543221 234556
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccccc---ccccceeee--ecCCCCCCcc--cCCCCCcc-ccccccce
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRAD---TNLCSIFRY--SSNYPTQRTK--PDIDDIPM-GVPGSLTL 151 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~---~~~~~~~~~--~~~~~~~~~~--~~~dg~~~-~~~~~~~l 151 (174)
.+..++|+| ++.+|++++.||.|++||+.+..... ......... ....+.+..+ ...||... -...+.++
T Consensus 194 -~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~ 271 (312)
T 4ery_A 194 -PVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 271 (312)
T ss_dssp -CEEEEEECT-TSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCE
T ss_pred -ceEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchh
Confidence 899999999 56789999999999999994311100 000000000 0000111111 22344211 11355678
Q ss_pred eeeeeccccceeeeeeCCCCCC
Q psy6415 152 LQEATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 152 l~~~~~h~~~V~~l~~spd~~~ 173 (174)
+.++.+|..+|.+++|+|+++.
T Consensus 272 ~~~~~~h~~~v~~~~~~p~~~~ 293 (312)
T 4ery_A 272 VQKLQGHTDVVISTACHPTENI 293 (312)
T ss_dssp EEEECCCSSCEEEEEECSSSSE
T ss_pred hhhhhccCCcEEEEeecCcCCc
Confidence 9999999999999999999863
No 37
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.88 E-value=5.8e-22 Score=162.87 Aligned_cols=130 Identities=15% Similarity=0.128 Sum_probs=94.0
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEee-c---CCCEEEEEecCCCCCCCEE------------EEEeCCCcEEEEECCCcc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETN-L---KNGVCGVDFDRRDIPMNKL------------VATTLEAKLFVFDLKTLH 64 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~---~~~V~sv~f~~~~~~~~~l------------~s~s~Dg~I~iWD~~~~~ 64 (174)
+||||+.|++|||||+++++++..+. + ...|++++|+|++ ..+ ++|+.|++||+||.++..
T Consensus 195 ~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG---~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk 271 (356)
T 2w18_A 195 ALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMG---LLFIVLSHPCAKESESLRSPVFQLIVINPKTTL 271 (356)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETT---EEEEEEC------------CCEEEEEEETTTTE
T ss_pred eEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCC---CEEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence 38899999999999999999887664 2 2468888999974 544 678999999999999876
Q ss_pred cccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccc
Q psy6415 65 REKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMG 144 (174)
Q Consensus 65 ~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~ 144 (174)
....+......+|.. .+.+..++ +.++|+|+.||+|+|||++
T Consensus 272 ~l~v~~~~~p~Gh~~-~~lsg~~s---g~~lASgS~DgTIkIWDl~---------------------------------- 313 (356)
T 2w18_A 272 SVGVMLYCLPPGQAG-RFLEGDVK---DHCAAAILTSGTIAIWDLL---------------------------------- 313 (356)
T ss_dssp EEEEEEECCCTTCCC-CEEEEEEE---TTEEEEEETTSCEEEEETT----------------------------------
T ss_pred EEEEEEeeccCCCcc-eeEccccC---CCEEEEEcCCCcEEEEECC----------------------------------
Confidence 443221111246766 66665554 4689999999999999991
Q ss_pred cccccceeeeeecccccee-eeeeCCCCCCC
Q psy6415 145 VPGSLTLLQEATLSSQPIN-SLDWSADKLGL 174 (174)
Q Consensus 145 ~~~~~~ll~~~~~h~~~V~-~l~~spd~~~~ 174 (174)
++++++++.+|...|. +++|||||+-|
T Consensus 314 ---tGk~l~tL~gH~~~vvs~vafSPDG~~L 341 (356)
T 2w18_A 314 ---LGQCTALLPPVSDQHWSFVKWSGTDSHL 341 (356)
T ss_dssp ---TCSEEEEECCC--CCCCEEEECSSSSEE
T ss_pred ---CCcEEEEecCCCCCeEEEEEECCCCCEE
Confidence 2468999999998766 48999999743
No 38
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.87 E-value=1.5e-21 Score=171.34 Aligned_cols=162 Identities=12% Similarity=0.119 Sum_probs=113.9
Q ss_pred CEEEEecCCcEEEEECCCCC-----eEE-EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee
Q psy6415 1 MVVAGYDNGDLKMFDLKTMS-----LKW-ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE 74 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~-----~~~-~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~ 74 (174)
+|+||+.||+|+|||+++.. ... ...|...|.+|+|+|++ +.|++|+.|++|+|||+++..+ ...+
T Consensus 397 ~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g---~~l~sgs~Dg~v~vwd~~~~~~-----~~~~ 468 (694)
T 3dm0_A 397 IIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDG---QFALSGSWDGELRLWDLAAGVS-----TRRF 468 (694)
T ss_dssp EEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTTEE-----EEEE
T ss_pred EEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCC---CEEEEEeCCCcEEEEECCCCcc-----eeEE
Confidence 48999999999999997643 222 24577889999999974 8999999999999999998653 3345
Q ss_pred cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccc----ccccccceeeeecCC-CCCC--cc--cCCCCCcccc
Q psy6415 75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALR----ADTNLCSIFRYSSNY-PTQR--TK--PDIDDIPMGV 145 (174)
Q Consensus 75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~----~~~~~~~~~~~~~~~-~~~~--~~--~~~dg~~~~~ 145 (174)
.+|.. .|++++|+|+ +..|+|||.|++|++||+..... .....+........+ |... .+ .+.||. +.+
T Consensus 469 ~~h~~-~v~~~~~s~~-~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~-v~v 545 (694)
T 3dm0_A 469 VGHTK-DVLSVAFSLD-NRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKT-VKV 545 (694)
T ss_dssp ECCSS-CEEEEEECTT-SSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSC-EEE
T ss_pred eCCCC-CEEEEEEeCC-CCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCe-EEE
Confidence 68999 9999999995 56889999999999999832111 000111111222222 2221 11 113432 111
Q ss_pred --ccccceeeeeeccccceeeeeeCCCCCC
Q psy6415 146 --PGSLTLLQEATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 146 --~~~~~ll~~~~~h~~~V~~l~~spd~~~ 173 (174)
....+++.++.+|..+|++++||||++-
T Consensus 546 wd~~~~~~~~~~~~h~~~v~~v~~spdg~~ 575 (694)
T 3dm0_A 546 WNLSNCKLRSTLAGHTGYVSTVAVSPDGSL 575 (694)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSE
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEeCCCCE
Confidence 2345678899999999999999999863
No 39
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.87 E-value=2.5e-21 Score=161.18 Aligned_cols=143 Identities=17% Similarity=0.270 Sum_probs=109.5
Q ss_pred CEEEEecCCcEEEEECCCC---CeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415 1 MVVAGYDNGDLKMFDLKTM---SLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA 76 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~---~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~ 76 (174)
+|++|+.||.|++||++++ ..... ..|...|++|+|+|++ ...|++|+.||+|+|||+++... .+..+..
T Consensus 246 ~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~--~~~l~tg~~dg~v~vwd~~~~~~----~~~~~~~ 319 (430)
T 2xyi_A 246 LFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYS--EFILATGSADKTVALWDLRNLKL----KLHSFES 319 (430)
T ss_dssp EEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSC--TTEEEEEETTSEEEEEETTCTTS----CSEEEEC
T ss_pred EEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCC--CCEEEEEeCCCeEEEEeCCCCCC----CeEEeec
Confidence 4789999999999999987 33333 3577889999999974 34789999999999999997431 2345568
Q ss_pred cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeee
Q psy6415 77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEAT 156 (174)
Q Consensus 77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~ 156 (174)
|.. .|++++|+|++..+||+++.||+|+|||+....+. ......++| ..++++.+.
T Consensus 320 h~~-~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~----------------~~~~~~~~~-------~~~~~~~~~ 375 (430)
T 2xyi_A 320 HKD-EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE----------------QSTEDAEDG-------PPELLFIHG 375 (430)
T ss_dssp CSS-CEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCC----------------CCHHHHHHC-------CTTEEEECC
T ss_pred CCC-CEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccc----------------cCccccccC-------CcceEEEcC
Confidence 988 99999999987789999999999999999210000 000000112 236899999
Q ss_pred ccccceeeeeeCCCCCC
Q psy6415 157 LSSQPINSLDWSADKLG 173 (174)
Q Consensus 157 ~h~~~V~~l~~spd~~~ 173 (174)
+|..+|++|+|+|++++
T Consensus 376 ~h~~~v~~~~~~p~~~~ 392 (430)
T 2xyi_A 376 GHTAKISDFSWNPNEPW 392 (430)
T ss_dssp CCSSCEEEEEECSSSTT
T ss_pred CCCCCceEEEECCCCCC
Confidence 99999999999999874
No 40
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.87 E-value=2.9e-21 Score=156.12 Aligned_cols=125 Identities=19% Similarity=0.239 Sum_probs=104.2
Q ss_pred CEEEEecCCcEEEEECCCCC----eEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec
Q psy6415 1 MVVAGYDNGDLKMFDLKTMS----LKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK 75 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~----~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~ 75 (174)
+||+|+.|+.|++||+++.. .... ..|...|.++.|+++ +.|++++.|++|++||+++.++ ..++.
T Consensus 111 ~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~l~s~s~d~~i~~wd~~~~~~-----~~~~~ 181 (340)
T 1got_B 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD----NQIVTSSGDTTCALWDIETGQQ-----TTTFT 181 (340)
T ss_dssp EEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEET----TEEEEEETTSCEEEEETTTTEE-----EEEEC
T ss_pred EEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCC----CcEEEEECCCcEEEEECCCCcE-----EEEEc
Confidence 37999999999999998764 2222 346788999999985 6799999999999999998653 34556
Q ss_pred ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeee
Q psy6415 76 AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEA 155 (174)
Q Consensus 76 ~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~ 155 (174)
+|.. .|++++|+| ++.+|++|+.||+|++||+. . ++.+.++
T Consensus 182 ~h~~-~v~~~~~~~-~~~~l~sg~~d~~v~~wd~~----------------------------~---------~~~~~~~ 222 (340)
T 1got_B 182 GHTG-DVMSLSLAP-DTRLFVSGACDASAKLWDVR----------------------------E---------GMCRQTF 222 (340)
T ss_dssp CCSS-CEEEEEECT-TSSEEEEEETTSCEEEEETT----------------------------T---------CSEEEEE
T ss_pred CCCC-ceEEEEECC-CCCEEEEEeCCCcEEEEECC----------------------------C---------CeeEEEE
Confidence 8999 999999999 56799999999999999991 1 2467888
Q ss_pred eccccceeeeeeCCCCCC
Q psy6415 156 TLSSQPINSLDWSADKLG 173 (174)
Q Consensus 156 ~~h~~~V~~l~~spd~~~ 173 (174)
.+|..+|++++|+|++..
T Consensus 223 ~~h~~~v~~v~~~p~~~~ 240 (340)
T 1got_B 223 TGHESDINAICFFPNGNA 240 (340)
T ss_dssp CCCSSCEEEEEECTTSSE
T ss_pred cCCcCCEEEEEEcCCCCE
Confidence 999999999999999863
No 41
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.87 E-value=7.2e-22 Score=164.54 Aligned_cols=129 Identities=15% Similarity=0.176 Sum_probs=102.1
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEeec---CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETNL---KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH 77 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~~---~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h 77 (174)
+|+||+.||+|+|||++++.+.....+ ...+++++|+|++ +.|++|+.||+|++||++... +.++.+|
T Consensus 179 ~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~g~~dg~i~~wd~~~~~------~~~~~~h 249 (435)
T 4e54_B 179 QFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASS---RMVVTGDNVGNVILLNMDGKE------LWNLRMH 249 (435)
T ss_dssp EEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTT---TEEEEECSSSBEEEEESSSCB------CCCSBCC
T ss_pred EEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCC---CEEEEEeCCCcEeeeccCcce------eEEEecc
Confidence 489999999999999998765443322 3457899999974 899999999999999998642 3345689
Q ss_pred CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415 78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL 157 (174)
Q Consensus 78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~ 157 (174)
.. .|++++|+|++..+||+|+.||+|+|||+.+ . .+ ...+....+
T Consensus 250 ~~-~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~----~----------------------~~--------~~~~~~~~~ 294 (435)
T 4e54_B 250 KK-KVTHVALNPCCDWFLATASVDQTVKIWDLRQ----V----------------------RG--------KASFLYSLP 294 (435)
T ss_dssp SS-CEEEEEECTTCSSEEEEEETTSBCCEEETTT----C----------------------CS--------SSCCSBCCB
T ss_pred cc-eEEeeeecCCCceEEEEecCcceeeEEeccc----c----------------------cc--------cceEEEeee
Confidence 99 9999999998778999999999999999911 0 00 012334468
Q ss_pred cccceeeeeeCCCCCC
Q psy6415 158 SSQPINSLDWSADKLG 173 (174)
Q Consensus 158 h~~~V~~l~~spd~~~ 173 (174)
|..+|++++|||||+-
T Consensus 295 h~~~v~~~~~spdg~~ 310 (435)
T 4e54_B 295 HRHPVNAACFSPDGAR 310 (435)
T ss_dssp CSSCEEECCBCTTSSE
T ss_pred ccccccceeECCCCCe
Confidence 9999999999999864
No 42
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.87 E-value=3.7e-21 Score=167.12 Aligned_cols=129 Identities=11% Similarity=0.200 Sum_probs=103.3
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe--------ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccce---
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET--------NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGF--- 69 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~--------~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~--- 69 (174)
+||||+.|++|+|||++++++...+ .|...|.+|+|+|++ ++|++++.|++|+|||+++.++...+
T Consensus 204 ~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg---~~l~s~s~D~~v~lWd~~~~~~~~~~~~~ 280 (611)
T 1nr0_A 204 LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG---TKIASASADKTIKIWNVATLKVEKTIPVG 280 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCC---CEEEEEeCCCeEEEEeCCCCceeeeecCC
Confidence 4899999999999999999877654 477889999999974 89999999999999999876543221
Q ss_pred -----------------------------------eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccc
Q psy6415 70 -----------------------------------AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALR 114 (174)
Q Consensus 70 -----------------------------------~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~ 114 (174)
....+.+|.. .|++++|+| ++.+||||+.||+|++||++
T Consensus 281 ~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~-~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~---- 354 (611)
T 1nr0_A 281 TRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNK-AITALSSSA-DGKTLFSADAEGHINSWDIS---- 354 (611)
T ss_dssp SSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSS-CEEEEEECT-TSSEEEEEETTSCEEEEETT----
T ss_pred CCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCC-CEEEEEEeC-CCCEEEEEeCCCcEEEEECC----
Confidence 1123458988 999999999 56799999999999999991
Q ss_pred ccccccceeeeecCCCCCCcccCCCCCccccccccceeeee-eccccceeeeeeCCCC
Q psy6415 115 ADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEA-TLSSQPINSLDWSADK 171 (174)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~-~~h~~~V~~l~~spd~ 171 (174)
.| +.+..+ .+|...|.+++|+|++
T Consensus 355 ------------------------~~---------~~~~~~~~~h~~~v~~~~~s~~~ 379 (611)
T 1nr0_A 355 ------------------------TG---------ISNRVFPDVHATMITGIKTTSKG 379 (611)
T ss_dssp ------------------------TC---------CEEECSSCSCSSCEEEEEECTTS
T ss_pred ------------------------CC---------ceeeecccCCcceEEEEEECCCC
Confidence 11 122233 5788999999999875
No 43
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.87 E-value=8.7e-22 Score=162.56 Aligned_cols=170 Identities=12% Similarity=0.108 Sum_probs=108.3
Q ss_pred CEEEEecCCcEEEEECCCCCeEE-EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccccee---------
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKW-ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFA--------- 70 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~-~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~--------- 70 (174)
+||||+.|++|||||++++.... ...+...|.+|+|+|++ .++|++|+.|++|+|||+++........
T Consensus 158 ~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~--~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~ 235 (393)
T 4gq1_A 158 VIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSN--PNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPW 235 (393)
T ss_dssp EEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTE--EEEEEEEETTSEEEEEETTCCC----------CSCCC
T ss_pred EEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCC--CceEEecCCCCEEEEEECCCCcccccccccCCcccce
Confidence 48999999999999998776544 45688899999999974 3579999999999999999864321110
Q ss_pred -----------eeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccc-cccce----------eeee--
Q psy6415 71 -----------YLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADT-NLCSI----------FRYS-- 126 (174)
Q Consensus 71 -----------~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~-~~~~~----------~~~~-- 126 (174)
.....+|.. .|.+++|++.++..|++++.|++|++||+.+.....+ ..... .+..
T Consensus 236 ~~s~~~~~~~~~~~~~~~~~-~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 314 (393)
T 4gq1_A 236 LLTLNTLPLVNTCHSSGIAS-SLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISL 314 (393)
T ss_dssp SEEEESGGGC------CCSS-SCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECS
T ss_pred EEecccccceeeeecccccc-cceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccc
Confidence 001235777 8999999855778999999999999999954211100 00000 0000
Q ss_pred cCC-------C--CCCcc--cCCCCCcccc--ccccceeeeeeccccceeeeeeCCCCCCC
Q psy6415 127 SNY-------P--TQRTK--PDIDDIPMGV--PGSLTLLQEATLSSQPINSLDWSADKLGL 174 (174)
Q Consensus 127 ~~~-------~--~~~~~--~~~dg~~~~~--~~~~~ll~~~~~h~~~V~~l~~spd~~~~ 174 (174)
..+ | +...+ ...||. +.+ ..+++.+..+.+|..+|++|+|||||+-|
T Consensus 315 ~~~~~~~~~~~~~~~~~~~sgs~Dg~-V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~L 374 (393)
T 4gq1_A 315 FPSLLGACPHPRYMDYFATAHSQHGL-IQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHL 374 (393)
T ss_dssp SCCSSCCEECSSCTTEEEEEETTTTE-EEEEETTCTTCCEEEEECSSCEEEEEECTTSSEE
T ss_pred cCcceeEEEccCCCCEEEEEECCCCE-EEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEE
Confidence 000 0 00000 112331 111 23446677788899999999999999753
No 44
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.87 E-value=1.3e-21 Score=156.83 Aligned_cols=132 Identities=13% Similarity=0.205 Sum_probs=102.9
Q ss_pred CEEEEecCCcEEEEECCCCCe--EEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSL--KWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH 77 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~--~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h 77 (174)
+||||+.|++|+|||++++.. ... ..|...|++|+|+|.. +++.|++|+.|++|+|||+++.+.. ....+.+|
T Consensus 27 ~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~-~~~~l~s~s~D~~v~iWd~~~~~~~---~~~~~~~h 102 (316)
T 3bg1_A 27 RLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPM-YGNILASCSYDRKVIIWREENGTWE---KSHEHAGH 102 (316)
T ss_dssp EEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGG-GSSCEEEEETTSCEEEECCSSSCCC---EEEEECCC
T ss_pred EEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCC-CCCEEEEEECCCEEEEEECCCCcce---EEEEccCC
Confidence 489999999999999987753 233 3578899999998631 1478999999999999999875321 23355689
Q ss_pred CcCcEEEEEEcCCC-CCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeee
Q psy6415 78 KATTVWAAKHLPQN-RDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEAT 156 (174)
Q Consensus 78 ~~~~i~~v~fsP~~-~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~ 156 (174)
.. .|++++|+|++ +.+||+|+.||+|++||+. .+ ...+++..+.
T Consensus 103 ~~-~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~----------------------------~~------~~~~~~~~~~ 147 (316)
T 3bg1_A 103 DS-SVNSVCWAPHDYGLILACGSSDGAISLLTYT----------------------------GE------GQWEVKKINN 147 (316)
T ss_dssp SS-CCCEEEECCTTTCSCEEEECSSSCEEEEEEC----------------------------SS------SCEEECCBTT
T ss_pred CC-ceEEEEECCCCCCcEEEEEcCCCCEEEEecC----------------------------CC------CCcceeeeec
Confidence 99 99999999963 5789999999999999991 00 0112356678
Q ss_pred ccccceeeeeeCCCC
Q psy6415 157 LSSQPINSLDWSADK 171 (174)
Q Consensus 157 ~h~~~V~~l~~spd~ 171 (174)
+|..+|++++|+|+.
T Consensus 148 ~h~~~v~~~~~~~~~ 162 (316)
T 3bg1_A 148 AHTIGCNAVSWAPAV 162 (316)
T ss_dssp SSSSCBCCCEECCCC
T ss_pred cccCCcceEEEcccc
Confidence 899999999999984
No 45
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.87 E-value=6.6e-21 Score=162.15 Aligned_cols=125 Identities=17% Similarity=0.302 Sum_probs=105.1
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
+||+|+.|++|++||.....+.....|...|.+++|+|++ +.|++++.|++|++||+... ....+.+|..
T Consensus 399 ~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~---~~l~~~~~d~~v~~w~~~~~------~~~~~~~~~~- 468 (577)
T 2ymu_A 399 TIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDD---QTIASASDDKTVKLWNRNGQ------LLQTLTGHSS- 468 (577)
T ss_dssp CEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTSC------EEEEEECCSS-
T ss_pred EEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCC---CEEEEEcCCCEEEEEECCCC------EEEEEcCCCC-
Confidence 4899999999999997544333345678899999999974 89999999999999997542 2345668999
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ 160 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~ 160 (174)
.|++++|+| ++.+||+++.|++|++||. +| +++.++.+|..
T Consensus 469 ~v~~~~~sp-d~~~las~~~d~~i~iw~~-----------------------------~~---------~~~~~~~~h~~ 509 (577)
T 2ymu_A 469 SVRGVAFSP-DGQTIASASDDKTVKLWNR-----------------------------NG---------QLLQTLTGHSS 509 (577)
T ss_dssp CEEEEEECT-TSCEEEEEETTSEEEEEET-----------------------------TS---------CEEEEEECCSS
T ss_pred CEEEEEEcC-CCCEEEEEeCCCEEEEEcC-----------------------------CC---------CEEEEEeCCCC
Confidence 999999999 5679999999999999999 32 46889999999
Q ss_pred ceeeeeeCCCCCCC
Q psy6415 161 PINSLDWSADKLGL 174 (174)
Q Consensus 161 ~V~~l~~spd~~~~ 174 (174)
+|++|+||||++-|
T Consensus 510 ~v~~l~~s~dg~~l 523 (577)
T 2ymu_A 510 SVRGVAFSPDGQTI 523 (577)
T ss_dssp CEEEEEECTTSSCE
T ss_pred CEEEEEEcCCCCEE
Confidence 99999999999753
No 46
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.87 E-value=7.9e-22 Score=158.09 Aligned_cols=133 Identities=14% Similarity=0.143 Sum_probs=104.0
Q ss_pred CEEEEecCCcEEEEECCCCC--eEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMS--LKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH 77 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~--~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h 77 (174)
+||||+.|++|+|||++++. .... ..|...|++|+|+|+. .+..|++|+.|++|+|||++..... .....+.+|
T Consensus 73 ~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~-~g~~lasgs~D~~i~lwd~~~~~~~--~~~~~~~~h 149 (316)
T 3bg1_A 73 ILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHD-YGLILACGSSDGAISLLTYTGEGQW--EVKKINNAH 149 (316)
T ss_dssp CEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTT-TCSCEEEECSSSCEEEEEECSSSCE--EECCBTTSS
T ss_pred EEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCC-CCcEEEEEcCCCCEEEEecCCCCCc--ceeeeeccc
Confidence 58999999999999999874 3333 3477889999999962 2478999999999999999875311 012244688
Q ss_pred CcCcEEEEEEcCCC----------------CCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCC
Q psy6415 78 KATTVWAAKHLPQN----------------RDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDI 141 (174)
Q Consensus 78 ~~~~i~~v~fsP~~----------------~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~ 141 (174)
.. .|.+++|+|+. +.+||+|+.|++|+|||++ .+
T Consensus 150 ~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~----------------------------~~- 199 (316)
T 3bg1_A 150 TI-GCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEE----------------------------ED- 199 (316)
T ss_dssp SS-CBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEEC----------------------------TT-
T ss_pred cC-CcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeC----------------------------CC-
Confidence 88 99999999952 3589999999999999991 00
Q ss_pred ccccccccceeeeeeccccceeeeeeCCCC
Q psy6415 142 PMGVPGSLTLLQEATLSSQPINSLDWSADK 171 (174)
Q Consensus 142 ~~~~~~~~~ll~~~~~h~~~V~~l~~spd~ 171 (174)
++.+++.++.+|..+|++++|||++
T Consensus 200 -----~~~~~~~~l~~h~~~V~~v~~sp~~ 224 (316)
T 3bg1_A 200 -----GQWKEEQKLEAHSDWVRDVAWAPSI 224 (316)
T ss_dssp -----SCEEEEECCBCCSSCEEEEECCCCS
T ss_pred -----CccceeeecccCCCceEEEEecCCC
Confidence 0123577889999999999999986
No 47
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.87 E-value=4.9e-21 Score=152.80 Aligned_cols=61 Identities=13% Similarity=0.152 Sum_probs=54.3
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEe--cCCCCCCCEEEEEeCCCcEEEEECCCcc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDF--DRRDIPMNKLVATTLEAKLFVFDLKTLH 64 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f--~~~~~~~~~l~s~s~Dg~I~iWD~~~~~ 64 (174)
+|++|+.||+|++||++++++.....|...|.+++| +|+ ++.|++++.|++|++||+++.+
T Consensus 100 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 100 KVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPN---YSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSS---CEEEEEEETTSEEEEECSSCSS
T ss_pred EEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCC---CCEEEEccCCCcEEEEECCCCc
Confidence 489999999999999999998877778899999999 775 3789999999999999998764
No 48
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.87 E-value=6.6e-21 Score=156.93 Aligned_cols=128 Identities=16% Similarity=0.216 Sum_probs=101.6
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe--------ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc------
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET--------NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE------ 66 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~--------~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~------ 66 (174)
+||+|+.||+|++||++++.+.... .|...|.+++|+|++ +.|++|+.|++|+|||+++....
T Consensus 221 ~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g---~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 297 (393)
T 1erj_A 221 YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG---QSVVSGSLDRSVKLWNLQNANNKSDSKTP 297 (393)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTS---SEEEEEETTSEEEEEEC------------
T ss_pred EEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCC---CEEEEEeCCCEEEEEECCCCCCcccccCC
Confidence 4899999999999999998876543 356789999999974 89999999999999999864321
Q ss_pred -cceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccc
Q psy6415 67 -KGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGV 145 (174)
Q Consensus 67 -~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~ 145 (174)
......++.+|.. .|.+++|+| ++.+|+||+.||+|++||++ .
T Consensus 298 ~~~~~~~~~~~h~~-~v~~~~~~~-~~~~l~sgs~D~~v~iwd~~----------------------------~------ 341 (393)
T 1erj_A 298 NSGTCEVTYIGHKD-FVLSVATTQ-NDEYILSGSKDRGVLFWDKK----------------------------S------ 341 (393)
T ss_dssp ---CEEEEEECCSS-CEEEEEECG-GGCEEEEEETTSEEEEEETT----------------------------T------
T ss_pred CCCcceEEEecccC-cEEEEEECC-CCCEEEEEeCCCeEEEEECC----------------------------C------
Confidence 0112335568998 999999999 56789999999999999991 2
Q ss_pred ccccceeeeeeccccceeeeeeCCC
Q psy6415 146 PGSLTLLQEATLSSQPINSLDWSAD 170 (174)
Q Consensus 146 ~~~~~ll~~~~~h~~~V~~l~~spd 170 (174)
++.+.++.+|..+|.+++|+|+
T Consensus 342 ---~~~~~~l~~h~~~v~~v~~~~~ 363 (393)
T 1erj_A 342 ---GNPLLMLQGHRNSVISVAVANG 363 (393)
T ss_dssp ---CCEEEEEECCSSCEEEEEECSS
T ss_pred ---CeEEEEECCCCCCEEEEEecCC
Confidence 2467888999999999999874
No 49
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.87 E-value=2.1e-21 Score=157.18 Aligned_cols=146 Identities=10% Similarity=0.025 Sum_probs=99.3
Q ss_pred CEEEEecCCcEEEEECCCCC---eE-EEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMS---LK-WETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA 76 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~---~~-~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~ 76 (174)
+||+|+.||+|++||++++. .. ....|...|.+++|+|++ +.|++++.|++|++||+++.+... ....+..
T Consensus 69 ~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~--~~~~~~~ 143 (377)
T 3dwl_C 69 RIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNE---DKFAVGSGARVISVCYFEQENDWW--VSKHLKR 143 (377)
T ss_dssp CEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTS---SCCEEEESSSCEEECCC-----CC--CCEEECS
T ss_pred EEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCC---CEEEEEecCCeEEEEEECCcccce--eeeEeec
Confidence 58999999999999999876 22 234577889999999974 899999999999999999865211 1233445
Q ss_pred -cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeee
Q psy6415 77 -HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEA 155 (174)
Q Consensus 77 -h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~ 155 (174)
|.. .|++++|+| ++.+||+|+.||+|++||+++..-..+ + .....|.. ...++++.++
T Consensus 144 ~h~~-~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~------------~----~~~~~~~~---~~~~~~~~~~ 202 (377)
T 3dwl_C 144 PLRS-TILSLDWHP-NNVLLAAGCADRKAYVLSAYVRDVDAK------------P----EASVWGSR---LPFNTVCAEY 202 (377)
T ss_dssp SCCS-CEEEEEECT-TSSEEEEEESSSCEEEEEECCSSCC-C------------C----CSCSSCSC---CCEEEEEECC
T ss_pred ccCC-CeEEEEEcC-CCCEEEEEeCCCEEEEEEEEecccCCC------------c----cccccccc---cchhhhhhcc
Confidence 888 999999999 567999999999999999921000000 0 00001100 1234678888
Q ss_pred eccccceeeeeeCCCCCC
Q psy6415 156 TLSSQPINSLDWSADKLG 173 (174)
Q Consensus 156 ~~h~~~V~~l~~spd~~~ 173 (174)
+|..+|++++||||++-
T Consensus 203 -~~~~~v~~~~~sp~~~~ 219 (377)
T 3dwl_C 203 -PSGGWVHAVGFSPSGNA 219 (377)
T ss_dssp -CCSSSEEEEEECTTSSC
T ss_pred -cCCceEEEEEECCCCCE
Confidence 99999999999999874
No 50
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.86 E-value=1.4e-21 Score=158.09 Aligned_cols=134 Identities=14% Similarity=0.133 Sum_probs=99.6
Q ss_pred CEEEEecCCcEEEEECCCCCe---EEEe-e-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc---------
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSL---KWET-N-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE--------- 66 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~---~~~~-~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~--------- 66 (174)
+|++|+.|++|++||+++++. .... . |...|++++|+|++ +.|++++.|++|++||++..+..
T Consensus 114 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 190 (377)
T 3dwl_C 114 KFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNN---VLLAAGCADRKAYVLSAYVRDVDAKPEASVWG 190 (377)
T ss_dssp CCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTS---SEEEEEESSSCEEEEEECCSSCC-CCCSCSSC
T ss_pred EEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCC---CEEEEEeCCCEEEEEEEEecccCCCccccccc
Confidence 478999999999999998762 3333 3 77889999999974 89999999999999999643210
Q ss_pred ----cceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCc
Q psy6415 67 ----KGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIP 142 (174)
Q Consensus 67 ----~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~ 142 (174)
.......+ .|.. .|++++|+| ++.+||+++.||+|++||++ .+..
T Consensus 191 ~~~~~~~~~~~~-~~~~-~v~~~~~sp-~~~~l~~~~~d~~i~iwd~~----------------------------~~~~ 239 (377)
T 3dwl_C 191 SRLPFNTVCAEY-PSGG-WVHAVGFSP-SGNALAYAGHDSSVTIAYPS----------------------------APEQ 239 (377)
T ss_dssp SCCCEEEEEECC-CCSS-SEEEEEECT-TSSCEEEEETTTEEC-CEEC----------------------------STTS
T ss_pred cccchhhhhhcc-cCCc-eEEEEEECC-CCCEEEEEeCCCcEEEEECC----------------------------CCCC
Confidence 01123344 8888 999999999 45689999999999999991 1110
Q ss_pred cccccccceeeeeeccccceeeeeeCCCCCC
Q psy6415 143 MGVPGSLTLLQEATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 143 ~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~ 173 (174)
..+++.++.+|..+|++++|+||++-
T Consensus 240 -----~~~~~~~~~~~~~~v~~~~~s~~~~~ 265 (377)
T 3dwl_C 240 -----PPRALITVKLSQLPLRSLLWANESAI 265 (377)
T ss_dssp -----CEEECCCEECSSSCEEEEEEEETTEE
T ss_pred -----cceeeEeecCCCCceEEEEEcCCCCE
Confidence 01247888999999999999999853
No 51
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.86 E-value=8.4e-21 Score=153.18 Aligned_cols=126 Identities=7% Similarity=0.004 Sum_probs=97.8
Q ss_pred EEEEecCCcEEEEECC---------CCCeEEEe--ecCCCEEEEEecC--CCCCCCEEEEEeCCCcEEEEECCCcccccc
Q psy6415 2 VVAGYDNGDLKMFDLK---------TMSLKWET--NLKNGVCGVDFDR--RDIPMNKLVATTLEAKLFVFDLKTLHREKG 68 (174)
Q Consensus 2 lasgs~Dg~iklWDl~---------~~~~~~~~--~~~~~V~sv~f~~--~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~ 68 (174)
|++|+.|++|++|+.+ ++++.... .+...|.+++|+| ++ +.|++++.|++|+|||+++.++...
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~ 164 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNT---EYFIWADNRGTIGFQSYEDDSQYIV 164 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---C---CEEEEEETTCCEEEEESSSSCEEEE
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCC---CEEEEEeCCCcEEEEECCCCcEEEE
Confidence 6899999999999765 44433332 3457799999999 64 8999999999999999998764211
Q ss_pred eeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccc
Q psy6415 69 FAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGS 148 (174)
Q Consensus 69 ~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~ 148 (174)
....|.. .|.+++|+| ++.+||+|+.||+|++||++ .+
T Consensus 165 ----~~~~~~~-~i~~~~~~p-dg~~lasg~~dg~i~iwd~~----------------------------~~-------- 202 (343)
T 3lrv_A 165 ----HSAKSDV-EYSSGVLHK-DSLLLALYSPDGILDVYNLS----------------------------SP-------- 202 (343)
T ss_dssp ----ECCCSSC-CCCEEEECT-TSCEEEEECTTSCEEEEESS----------------------------CT--------
T ss_pred ----EecCCCC-ceEEEEECC-CCCEEEEEcCCCEEEEEECC----------------------------CC--------
Confidence 1124555 799999999 56799999999999999991 11
Q ss_pred ccee-eeeec-cccceeeeeeCCCCCC
Q psy6415 149 LTLL-QEATL-SSQPINSLDWSADKLG 173 (174)
Q Consensus 149 ~~ll-~~~~~-h~~~V~~l~~spd~~~ 173 (174)
+.+ .++.+ |..+|++|+||||+.-
T Consensus 203 -~~~~~~~~~~h~~~v~~l~fs~~g~~ 228 (343)
T 3lrv_A 203 -DQASSRFPVDEEAKIKEVKFADNGYW 228 (343)
T ss_dssp -TSCCEECCCCTTSCEEEEEECTTSSE
T ss_pred -CCCccEEeccCCCCEEEEEEeCCCCE
Confidence 233 66777 9999999999999864
No 52
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.86 E-value=4.4e-21 Score=157.07 Aligned_cols=99 Identities=16% Similarity=0.250 Sum_probs=87.3
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+||+|+.||.|++||++++++.... .|...|++++|+|++ +.|++|+.|++|+|||+++.+.. ..+.+|..
T Consensus 111 ~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~s~d~~i~iwd~~~~~~~-----~~~~~h~~ 182 (420)
T 3vl1_A 111 RFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSG---EALISSSQDMQLKIWSVKDGSNP-----RTLIGHRA 182 (420)
T ss_dssp EEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTCCCC-----EEEECCSS
T ss_pred EEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCC---CEEEEEeCCCeEEEEeCCCCcCc-----eEEcCCCC
Confidence 4899999999999999988877664 578899999999974 89999999999999999986643 34568999
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.|++++|+| ++..|++|+.||+|++||+
T Consensus 183 -~v~~~~~~~-~~~~l~s~~~d~~v~iwd~ 210 (420)
T 3vl1_A 183 -TVTDIAIID-RGRNVLSASLDGTIRLWEC 210 (420)
T ss_dssp -CEEEEEEET-TTTEEEEEETTSCEEEEET
T ss_pred -cEEEEEEcC-CCCEEEEEcCCCcEEEeEC
Confidence 999999999 5678999999999999999
No 53
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.86 E-value=1.4e-21 Score=161.29 Aligned_cols=104 Identities=10% Similarity=0.166 Sum_probs=85.1
Q ss_pred CEEEEecCCcEEEEECCCCCeEEE------eecCCCEEEEEecCCC-----CCCCEEEEEeCCCcEEEEECCCcccccce
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWE------TNLKNGVCGVDFDRRD-----IPMNKLVATTLEAKLFVFDLKTLHREKGF 69 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~------~~~~~~V~sv~f~~~~-----~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~ 69 (174)
+||+|+.|++|+|||++++.+... ..|.+.|++|+|+|.. .++++|||||.|++|||||+++..+.
T Consensus 103 ~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~--- 179 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI--- 179 (393)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE---
T ss_pred EEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee---
Confidence 489999999999999998876432 2467889999998721 02478999999999999999875432
Q ss_pred eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecc
Q psy6415 70 AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLV 110 (174)
Q Consensus 70 ~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~ 110 (174)
..+..|.. +|.+|+|+|+++.+|++|+.||+|++||+.
T Consensus 180 --~~~~~~~~-~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~ 217 (393)
T 4gq1_A 180 --LAGYPLSS-PGISVQFRPSNPNQLIVGERNGNIRIFDWT 217 (393)
T ss_dssp --EEEEECSS-CEEEEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred --eeecCCCC-CcEEEEECCCCCceEEecCCCCEEEEEECC
Confidence 23447888 999999999777789999999999999993
No 54
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.86 E-value=6e-21 Score=154.04 Aligned_cols=99 Identities=11% Similarity=0.035 Sum_probs=82.8
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe--ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc-c
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET--NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA-H 77 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~--~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~-h 77 (174)
+|++|+.||+|++||++++++.... .+...|++++|+|++ ..|++|+.|++|+|||+++.+.. ...+.. |
T Consensus 141 ~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg---~~lasg~~dg~i~iwd~~~~~~~----~~~~~~~h 213 (343)
T 3lrv_A 141 YFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDS---LLLALYSPDGILDVYNLSSPDQA----SSRFPVDE 213 (343)
T ss_dssp EEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTS---CEEEEECTTSCEEEEESSCTTSC----CEECCCCT
T ss_pred EEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCC---CEEEEEcCCCEEEEEECCCCCCC----ccEEeccC
Confidence 3789999999999999999886543 244579999999974 89999999999999999987643 123445 8
Q ss_pred CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.. +|++++|+| ++.+||+++ |++|++||+
T Consensus 214 ~~-~v~~l~fs~-~g~~l~s~~-~~~v~iwd~ 242 (343)
T 3lrv_A 214 EA-KIKEVKFAD-NGYWMVVEC-DQTVVCFDL 242 (343)
T ss_dssp TS-CEEEEEECT-TSSEEEEEE-SSBEEEEET
T ss_pred CC-CEEEEEEeC-CCCEEEEEe-CCeEEEEEc
Confidence 88 999999999 567899999 569999999
No 55
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.85 E-value=3.6e-21 Score=174.88 Aligned_cols=133 Identities=15% Similarity=0.201 Sum_probs=101.1
Q ss_pred CEEEEecCCcEEEEECCCCCeE----EEe--------ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccc-
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLK----WET--------NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREK- 67 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~----~~~--------~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~- 67 (174)
+||||+.||+||+||+.++.+. ... .|...|.+|+|+|++ ..||+|+.||+|+|||+.+.+...
T Consensus 449 ~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg---~~LAsgs~DgtV~lwd~~~~~~~~~ 525 (902)
T 2oaj_A 449 AFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAET---LELAVSIETGDVVLFKYEVNQFYSV 525 (902)
T ss_dssp EEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTT---TEEEEEETTSCEEEEEEEECCC---
T ss_pred EEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCC---CeEEEEecCcEEEEEEecCccccCc
Confidence 4899999999999999887532 111 456789999999974 899999999999999998652100
Q ss_pred --------------------------------------c-eeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEe
Q psy6415 68 --------------------------------------G-FAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQ 108 (174)
Q Consensus 68 --------------------------------------~-~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd 108 (174)
+ ..+.++.+|.+ +|++|+||| ++ +||+|+.||+|+|||
T Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~-~V~svafSp-dG-~lAsgs~D~tv~lwd 602 (902)
T 2oaj_A 526 ENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKG-KTSAINNSN-IG-FVGIAYAAGSLMLID 602 (902)
T ss_dssp ------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSC-SEEEEEECB-TS-EEEEEETTSEEEEEE
T ss_pred cccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCC-cEEEEEecC-Cc-EEEEEeCCCcEEEEE
Confidence 0 11345678999 999999999 55 999999999999999
Q ss_pred ccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeee-ccccceeeeeeC-----CCC
Q psy6415 109 LVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEAT-LSSQPINSLDWS-----ADK 171 (174)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~-~h~~~V~~l~~s-----pd~ 171 (174)
+ ++..+ ..+.+ +..+. +|+..|++|+|| |||
T Consensus 603 ~-----------------------------~~~~~--~~~~~-~~~~~~gh~~~V~sv~Fs~~~~~~Dg 639 (902)
T 2oaj_A 603 R-----------------------------RGPAI--IYMEN-IREISGAQSACVTCIEFVIMEYGDDG 639 (902)
T ss_dssp T-----------------------------TTTEE--EEEEE-GGGTCSSCCCCEEEEEEEEEECTTSS
T ss_pred C-----------------------------CCCeE--EEEee-hhHhccccccceEEEEEEEEecCCCC
Confidence 9 21110 00011 24565 999999999999 986
No 56
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.1e-20 Score=154.00 Aligned_cols=128 Identities=12% Similarity=0.224 Sum_probs=106.8
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEeec-------CCCEEEEEecCCCCCCCEEEEEeCCC---cEEEEECCCccccccee
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETNL-------KNGVCGVDFDRRDIPMNKLVATTLEA---KLFVFDLKTLHREKGFA 70 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~~-------~~~V~sv~f~~~~~~~~~l~s~s~Dg---~I~iWD~~~~~~~~~~~ 70 (174)
+|++|+.||.|++||+++++....... ...|.+++|+|++ ...|++++.|+ .|++||+++... .
T Consensus 180 ~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~d~~~~~i~~~d~~~~~~----~ 253 (416)
T 2pm9_A 180 VFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKN--STRVATATGSDNDPSILIWDLRNANT----P 253 (416)
T ss_dssp EEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSC--TTEEEEEECCSSSCCCCEEETTSTTS----C
T ss_pred EEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCC--CCEEEEEECCCCCceEEEEeCCCCCC----C
Confidence 378999999999999999887766543 5679999999974 36899999999 999999998531 1
Q ss_pred eeeec-ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccccccc
Q psy6415 71 YLSEK-AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSL 149 (174)
Q Consensus 71 ~~~~~-~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~ 149 (174)
...+. +|.. .|++++|+|.++.+|++++.||+|++||++ . +
T Consensus 254 ~~~~~~~~~~-~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~----------------------------~---------~ 295 (416)
T 2pm9_A 254 LQTLNQGHQK-GILSLDWCHQDEHLLLSSGRDNTVLLWNPE----------------------------S---------A 295 (416)
T ss_dssp SBCCCSCCSS-CEEEEEECSSCSSCEEEEESSSEEEEECSS----------------------------S---------C
T ss_pred cEEeecCccC-ceeEEEeCCCCCCeEEEEeCCCCEEEeeCC----------------------------C---------C
Confidence 23445 7888 999999999667799999999999999991 1 2
Q ss_pred ceeeeeeccccceeeeeeCCCCC
Q psy6415 150 TLLQEATLSSQPINSLDWSADKL 172 (174)
Q Consensus 150 ~ll~~~~~h~~~V~~l~~spd~~ 172 (174)
+.+.++.+|..+|++++|+||++
T Consensus 296 ~~~~~~~~~~~~v~~~~~s~~~~ 318 (416)
T 2pm9_A 296 EQLSQFPARGNWCFKTKFAPEAP 318 (416)
T ss_dssp CEEEEEECSSSCCCCEEECTTCT
T ss_pred ccceeecCCCCceEEEEECCCCC
Confidence 46888899999999999999983
No 57
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.85 E-value=1.8e-20 Score=152.32 Aligned_cols=127 Identities=14% Similarity=0.211 Sum_probs=103.5
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe---ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET---NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH 77 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~---~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h 77 (174)
+||+|+.||+|+|||+++++..... .|...|.+++|+|++ ++.|++++.|++|++||+++.. ... ......|
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s~~~d~~i~iwd~~~~~-~~~--~~~~~~~ 162 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFN--TNQLFVSSIRGATTLRDFSGSV-IQV--FAKTDSW 162 (383)
T ss_dssp EEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTE--EEEEEEEETTTEEEEEETTSCE-EEE--EECCCCS
T ss_pred EEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCC--CCEEEEEeCCCEEEEEECCCCc-eEE--EeccCCC
Confidence 4899999999999999988776554 377889999999942 3789999999999999999632 111 1122344
Q ss_pred CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415 78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL 157 (174)
Q Consensus 78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~ 157 (174)
.. .|++++|+| ++.+||+|+.||+|++||+ ++ +.+.++.+
T Consensus 163 ~~-~v~~~~~~~-~~~~l~~~~~d~~i~i~d~-----------------------------~~---------~~~~~~~~ 202 (383)
T 3ei3_B 163 DY-WYCCVDVSV-SRQMLATGDSTGRLLLLGL-----------------------------DG---------HEIFKEKL 202 (383)
T ss_dssp SC-CEEEEEEET-TTTEEEEEETTSEEEEEET-----------------------------TS---------CEEEEEEC
T ss_pred CC-CeEEEEECC-CCCEEEEECCCCCEEEEEC-----------------------------CC---------CEEEEecc
Confidence 56 899999999 5679999999999999999 22 35788889
Q ss_pred cccceeeeeeCCCCC
Q psy6415 158 SSQPINSLDWSADKL 172 (174)
Q Consensus 158 h~~~V~~l~~spd~~ 172 (174)
|..+|++++|+|+++
T Consensus 203 h~~~v~~~~~~~~~~ 217 (383)
T 3ei3_B 203 HKAKVTHAEFNPRCD 217 (383)
T ss_dssp SSSCEEEEEECSSCT
T ss_pred CCCcEEEEEECCCCC
Confidence 999999999999986
No 58
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.85 E-value=7.9e-21 Score=156.01 Aligned_cols=132 Identities=12% Similarity=0.195 Sum_probs=103.4
Q ss_pred EEEEecCCcEEEEECCCCCe----E-EEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccc--eeeeee
Q psy6415 2 VVAGYDNGDLKMFDLKTMSL----K-WETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKG--FAYLSE 74 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~----~-~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~--~~~~~~ 74 (174)
+++|+.||.|+|||++.... . ....|...|++++|+|++ ++.|++|+.|++|+|||+++...... .....+
T Consensus 50 ~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~--~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~ 127 (402)
T 2aq5_A 50 ICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHN--DNVIASGSEDCTVMVWEIPDGGLVLPLREPVITL 127 (402)
T ss_dssp EBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTC--TTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEE
T ss_pred EEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCC--CCEEEEEeCCCeEEEEEccCCCCccccCCceEEe
Confidence 45688999999999965421 1 123477889999999932 48999999999999999998632110 123456
Q ss_pred cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeee
Q psy6415 75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQE 154 (174)
Q Consensus 75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~ 154 (174)
.+|.. .|++++|+|+++.+|++|+.||+|++||++ . ++.+.+
T Consensus 128 ~~h~~-~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~----------------------------~---------~~~~~~ 169 (402)
T 2aq5_A 128 EGHTK-RVGIVAWHPTAQNVLLSAGCDNVILVWDVG----------------------------T---------GAAVLT 169 (402)
T ss_dssp ECCSS-CEEEEEECSSBTTEEEEEETTSCEEEEETT----------------------------T---------TEEEEE
T ss_pred cCCCC-eEEEEEECcCCCCEEEEEcCCCEEEEEECC----------------------------C---------CCccEE
Confidence 68999 999999999766799999999999999991 1 245677
Q ss_pred e--eccccceeeeeeCCCCCC
Q psy6415 155 A--TLSSQPINSLDWSADKLG 173 (174)
Q Consensus 155 ~--~~h~~~V~~l~~spd~~~ 173 (174)
+ .+|..+|.+++|+||+.-
T Consensus 170 ~~~~~~~~~v~~~~~~~~~~~ 190 (402)
T 2aq5_A 170 LGPDVHPDTIYSVDWSRDGAL 190 (402)
T ss_dssp ECTTTCCSCEEEEEECTTSSC
T ss_pred EecCCCCCceEEEEECCCCCE
Confidence 7 789999999999999864
No 59
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.85 E-value=5e-20 Score=144.95 Aligned_cols=109 Identities=13% Similarity=0.213 Sum_probs=85.5
Q ss_pred CEEEEecCCcEEEEECCCCC----eEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccc----ceee
Q psy6415 1 MVVAGYDNGDLKMFDLKTMS----LKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREK----GFAY 71 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~----~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~----~~~~ 71 (174)
+||+|+.||+|++||++++. +... ..|...|.+++|+|.. +++.|++++.|++|+|||+++.+... ....
T Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~ 103 (351)
T 3f3f_A 25 HVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPE-YGRIIASASYDKTVKLWEEDPDQEECSGRRWNKL 103 (351)
T ss_dssp EEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGG-GCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEE
T ss_pred EEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCC-CCCEEEEEcCCCeEEEEecCCCcccccccCccee
Confidence 48999999999999998764 2222 3477889999999830 13899999999999999998753210 0123
Q ss_pred eeecccCcCcEEEEEEcCCC-CCEEEEEcCCCcEEEEeccc
Q psy6415 72 LSEKAHKATTVWAAKHLPQN-RDLFVTCGGSGSLNLWQLVS 111 (174)
Q Consensus 72 ~~~~~h~~~~i~~v~fsP~~-~~~las~s~Dg~V~lWd~~~ 111 (174)
..+..|.. .|++++|+|+. +.+|++++.||+|++||+.+
T Consensus 104 ~~~~~~~~-~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~ 143 (351)
T 3f3f_A 104 CTLNDSKG-SLYSVKFAPAHLGLKLACLGNDGILRLYDALE 143 (351)
T ss_dssp EEECCCSS-CEEEEEECCGGGCSEEEEEETTCEEEEEECSS
T ss_pred eeecccCC-ceeEEEEcCCCCCcEEEEecCCCcEEEecCCC
Confidence 45668888 99999999952 67899999999999999943
No 60
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.85 E-value=4e-20 Score=150.29 Aligned_cols=129 Identities=19% Similarity=0.256 Sum_probs=101.3
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEeec---CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETNL---KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH 77 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~~---~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h 77 (174)
+|++|+.||+|++||+++........+ ...|.+++|+|++ +.|++|+.|+.|++||++.. ....+.+|
T Consensus 133 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~i~d~~~~------~~~~~~~h 203 (383)
T 3ei3_B 133 QLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSR---QMLATGDSTGRLLLLGLDGH------EIFKEKLH 203 (383)
T ss_dssp EEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTT---TEEEEEETTSEEEEEETTSC------EEEEEECS
T ss_pred EEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCC---CEEEEECCCCCEEEEECCCC------EEEEeccC
Confidence 479999999999999997544433332 3679999999974 89999999999999999542 23455689
Q ss_pred CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415 78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL 157 (174)
Q Consensus 78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~ 157 (174)
.. .|.+++|+|++..+|++|+.||+|++||+.+ . . ...+++..+ +
T Consensus 204 ~~-~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~----~----------------------~-------~~~~~~~~~-~ 248 (383)
T 3ei3_B 204 KA-KVTHAEFNPRCDWLMATSSVDATVKLWDLRN----I----------------------K-------DKNSYIAEM-P 248 (383)
T ss_dssp SS-CEEEEEECSSCTTEEEEEETTSEEEEEEGGG----C----------------------C-------STTCEEEEE-E
T ss_pred CC-cEEEEEECCCCCCEEEEEeCCCEEEEEeCCC----C----------------------C-------cccceEEEe-c
Confidence 98 9999999996555999999999999999911 0 0 012345555 7
Q ss_pred cccceeeeeeCC-CCCC
Q psy6415 158 SSQPINSLDWSA-DKLG 173 (174)
Q Consensus 158 h~~~V~~l~~sp-d~~~ 173 (174)
|..+|.+++|+| |++-
T Consensus 249 ~~~~v~~~~~s~~~~~~ 265 (383)
T 3ei3_B 249 HEKPVNAAYFNPTDSTK 265 (383)
T ss_dssp CSSCEEEEEECTTTSCE
T ss_pred CCCceEEEEEcCCCCCE
Confidence 999999999999 8753
No 61
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.85 E-value=1.5e-20 Score=149.15 Aligned_cols=132 Identities=16% Similarity=0.179 Sum_probs=96.8
Q ss_pred EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
+++|+.|++|++||++++++.... .|...|++|+|+|++ ++|++|+.|++|+|||+++.++.. .+ .+..
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~---~~l~s~s~Dg~i~iwd~~~~~~~~-----~~-~~~~- 257 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDG---SLCASGGKDGQAMLWDLNEGKHLY-----TL-DGGD- 257 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS---SEEEEEETTCEEEEEETTTTEEEE-----EE-ECSS-
T ss_pred EEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCC---CEEEEEeCCCeEEEEEeccCceee-----ee-cCCc-
Confidence 689999999999999999877654 467889999999974 899999999999999999865432 33 3445
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ 160 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~ 160 (174)
.|.++.|+| ++. +++++.|++|++||+++... +.............+|..
T Consensus 258 ~v~~~~~~~-~~~-~~~~~~d~~i~iwd~~~~~~----------------------------~~~~~~~~~~~~~~~h~~ 307 (340)
T 4aow_A 258 IINALCFSP-NRY-WLCAATGPSIKIWDLEGKII----------------------------VDELKQEVISTSSKAEPP 307 (340)
T ss_dssp CEEEEEECS-SSS-EEEEEETTEEEEEETTTTEE----------------------------EEEECCC-------CCCC
T ss_pred eEEeeecCC-CCc-eeeccCCCEEEEEECCCCeE----------------------------EEeccccceeeeccCCCC
Confidence 799999999 454 46677899999999921000 000000123445678999
Q ss_pred ceeeeeeCCCCCC
Q psy6415 161 PINSLDWSADKLG 173 (174)
Q Consensus 161 ~V~~l~~spd~~~ 173 (174)
+|++|+||||++-
T Consensus 308 ~v~~l~~s~dg~~ 320 (340)
T 4aow_A 308 QCTSLAWSADGQT 320 (340)
T ss_dssp CEEEEEECTTSSE
T ss_pred CEEEEEECCCCCE
Confidence 9999999999864
No 62
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.85 E-value=2.7e-20 Score=149.23 Aligned_cols=132 Identities=17% Similarity=0.210 Sum_probs=105.7
Q ss_pred CEEEEecCCcEEEEECCCCC--eEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMS--LKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH 77 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~--~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h 77 (174)
+|++|+.||+|++||+++++ .... ..|...|.+++|+|+. .++.|++++.|++|++||+++..... ...+..|
T Consensus 71 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~---~~~~~~~ 146 (379)
T 3jrp_A 71 ILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHE-YGPLLLVASSDGKVSVVEFKENGTTS---PIIIDAH 146 (379)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGG-GCSEEEEEETTSEEEEEECCTTSCCC---EEEEECC
T ss_pred EEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCC-CCCEEEEecCCCcEEEEecCCCCcee---eEEecCC
Confidence 48999999999999999886 3333 3467889999999961 13899999999999999999864322 2344688
Q ss_pred CcCcEEEEEEcCC------------CCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccc
Q psy6415 78 KATTVWAAKHLPQ------------NRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGV 145 (174)
Q Consensus 78 ~~~~i~~v~fsP~------------~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~ 145 (174)
.. .|.+++|+|. ++.+|++|+.||+|++||+. .+.
T Consensus 147 ~~-~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~----------------------------~~~---- 193 (379)
T 3jrp_A 147 AI-GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN----------------------------SDA---- 193 (379)
T ss_dssp TT-CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEE----------------------------TTT----
T ss_pred CC-ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEec----------------------------CCC----
Confidence 88 9999999995 46799999999999999991 110
Q ss_pred ccccceeeeeeccccceeeeeeCCC
Q psy6415 146 PGSLTLLQEATLSSQPINSLDWSAD 170 (174)
Q Consensus 146 ~~~~~ll~~~~~h~~~V~~l~~spd 170 (174)
....++..+.+|..+|++++|+|+
T Consensus 194 -~~~~~~~~~~~h~~~v~~~~~sp~ 217 (379)
T 3jrp_A 194 -QTYVLESTLEGHSDWVRDVAWSPT 217 (379)
T ss_dssp -TEEEEEEEECCCSSCEEEEEECCC
T ss_pred -cceeeEEEEecccCcEeEEEECCC
Confidence 112467888999999999999999
No 63
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.85 E-value=2.3e-20 Score=153.22 Aligned_cols=126 Identities=12% Similarity=0.136 Sum_probs=100.9
Q ss_pred CEEEEecCCcEEEEECCCC-------CeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee
Q psy6415 1 MVVAGYDNGDLKMFDLKTM-------SLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL 72 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~-------~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~ 72 (174)
+||+|+.||+|+|||++++ ..... ..|...|.+++|+|++ .+.|++++.|++|+|||+++.++. .
T Consensus 96 ~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~--~~~l~s~~~dg~i~iwd~~~~~~~-----~ 168 (402)
T 2aq5_A 96 VIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTA--QNVLLSAGCDNVILVWDVGTGAAV-----L 168 (402)
T ss_dssp EEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSB--TTEEEEEETTSCEEEEETTTTEEE-----E
T ss_pred EEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCC--CCEEEEEcCCCEEEEEECCCCCcc-----E
Confidence 4899999999999999887 33333 4577889999999974 368999999999999999986543 3
Q ss_pred ee--cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccc
Q psy6415 73 SE--KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLT 150 (174)
Q Consensus 73 ~~--~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ 150 (174)
.+ ..|.. .|.+++|+| ++.+|++++.||+|++||++ . ++
T Consensus 169 ~~~~~~~~~-~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~----------------------------~---------~~ 209 (402)
T 2aq5_A 169 TLGPDVHPD-TIYSVDWSR-DGALICTSCRDKRVRVIEPR----------------------------K---------GT 209 (402)
T ss_dssp EECTTTCCS-CEEEEEECT-TSSCEEEEETTSEEEEEETT----------------------------T---------TE
T ss_pred EEecCCCCC-ceEEEEECC-CCCEEEEEecCCcEEEEeCC----------------------------C---------Cc
Confidence 44 57888 999999999 56789999999999999991 1 23
Q ss_pred eeeee-eccccc-eeeeeeCCCCC
Q psy6415 151 LLQEA-TLSSQP-INSLDWSADKL 172 (174)
Q Consensus 151 ll~~~-~~h~~~-V~~l~~spd~~ 172 (174)
.+.++ .+|... +.++.|+||++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~ 233 (402)
T 2aq5_A 210 VVAEKDRPHEGTRPVHAVFVSEGK 233 (402)
T ss_dssp EEEEEECSSCSSSCCEEEECSTTE
T ss_pred eeeeeccCCCCCcceEEEEcCCCc
Confidence 45566 677765 78888888864
No 64
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.84 E-value=5.5e-20 Score=153.07 Aligned_cols=132 Identities=17% Similarity=0.223 Sum_probs=105.5
Q ss_pred CEEEEecCCcEEEEECCCCCe-------EE-EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSL-------KW-ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL 72 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~-------~~-~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~ 72 (174)
+|++|+.||+|++||++++.. .. ...|...|.+++|+|.+ ++.|++++.|+.|++||+++.... ....
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~--~~~l~s~~~dg~i~i~d~~~~~~~--~~~~ 271 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLH--ESLFGSVADDQKLMIWDTRNNNTS--KPSH 271 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSC--TTEEEEEETTSEEEEEETTCSCSS--SCSE
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCC--CCEEEEEeCCCeEEEEECCCCCCC--ccee
Confidence 489999999999999987432 11 23467789999999953 488999999999999999976311 1233
Q ss_pred eecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccccccccee
Q psy6415 73 SEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLL 152 (174)
Q Consensus 73 ~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll 152 (174)
.+.+|.. .|++++|+|++..+||+|+.||+|++||+ | . ..+.+
T Consensus 272 ~~~~~~~-~v~~i~~~p~~~~~l~tg~~dg~v~vwd~----~------------------------~--------~~~~~ 314 (430)
T 2xyi_A 272 TVDAHTA-EVNCLSFNPYSEFILATGSADKTVALWDL----R------------------------N--------LKLKL 314 (430)
T ss_dssp EEECCSS-CEEEEEECSSCTTEEEEEETTSEEEEEET----T------------------------C--------TTSCS
T ss_pred EeecCCC-CeEEEEeCCCCCCEEEEEeCCCeEEEEeC----C------------------------C--------CCCCe
Confidence 4568888 99999999987779999999999999999 1 1 01357
Q ss_pred eeeeccccceeeeeeCCCCCC
Q psy6415 153 QEATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 153 ~~~~~h~~~V~~l~~spd~~~ 173 (174)
.++.+|..+|.+++|+|+++.
T Consensus 315 ~~~~~h~~~v~~i~~sp~~~~ 335 (430)
T 2xyi_A 315 HSFESHKDEIFQVQWSPHNET 335 (430)
T ss_dssp EEEECCSSCEEEEEECSSCTT
T ss_pred EEeecCCCCEEEEEECCCCCC
Confidence 888899999999999999864
No 65
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.84 E-value=7.3e-20 Score=146.76 Aligned_cols=139 Identities=11% Similarity=0.117 Sum_probs=104.7
Q ss_pred CEEEEecCCcEEEEECCCCCe---EEEeecCCCEEEEEecCCCC----------CCCEEEEEeCCCcEEEEECCCccccc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSL---KWETNLKNGVCGVDFDRRDI----------PMNKLVATTLEAKLFVFDLKTLHREK 67 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~---~~~~~~~~~V~sv~f~~~~~----------~~~~l~s~s~Dg~I~iWD~~~~~~~~ 67 (174)
+|++|+.||+|++||++++.. .....+...|++++|+|... +++.|++++.|+.|+|||+++.....
T Consensus 117 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 196 (379)
T 3jrp_A 117 LLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY 196 (379)
T ss_dssp EEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEE
T ss_pred EEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcce
Confidence 389999999999999988743 22345678899999999300 14899999999999999998764321
Q ss_pred ceeeeeecccCcCcEEEEEEcCCC--CCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccc
Q psy6415 68 GFAYLSEKAHKATTVWAAKHLPQN--RDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGV 145 (174)
Q Consensus 68 ~~~~~~~~~h~~~~i~~v~fsP~~--~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~ 145 (174)
.....+.+|.. .|.+++|+|++ +.+||+++.||+|++||+.+ +..
T Consensus 197 -~~~~~~~~h~~-~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~----------------------------~~~--- 243 (379)
T 3jrp_A 197 -VLESTLEGHSD-WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN----------------------------EQG--- 243 (379)
T ss_dssp -EEEEEECCCSS-CEEEEEECCCCSSSEEEEEEETTSCEEEEEESS----------------------------TTS---
T ss_pred -eeEEEEecccC-cEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC----------------------------CCc---
Confidence 12345678998 99999999953 67999999999999999911 000
Q ss_pred ccccceeeeeeccccceeeeeeCCCCCC
Q psy6415 146 PGSLTLLQEATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 146 ~~~~~ll~~~~~h~~~V~~l~~spd~~~ 173 (174)
.....+.....|..+|.+++|+||++-
T Consensus 244 -~~~~~~~~~~~~~~~v~~~~~s~~g~~ 270 (379)
T 3jrp_A 244 -PWKKTLLKEEKFPDVLWRASWSLSGNV 270 (379)
T ss_dssp -CCEEEESSSSCCSSCEEEEEECSSSCC
T ss_pred -cceeeeeccccCCCcEEEEEEcCCCCE
Confidence 001234444568899999999999874
No 66
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.84 E-value=6.8e-20 Score=149.28 Aligned_cols=133 Identities=16% Similarity=0.170 Sum_probs=99.8
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCC--------------CC------------------CEEEE-
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDI--------------PM------------------NKLVA- 48 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~--------------~~------------------~~l~s- 48 (174)
+++|+.|++|+|||+++++++....+...|.+++|+++.. .+ +.++.
T Consensus 74 ~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~ 153 (355)
T 3vu4_A 74 AFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYS 153 (355)
T ss_dssp EEECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEE
T ss_pred EEEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEe
Confidence 3578889999999999999887777788899999987410 01 23443
Q ss_pred -EeCCCcEEEEECCCccccc----c------ee-eeeecccCcCcEEEEEEcCCCCCEEEEEcCCCc-EEEEeccccccc
Q psy6415 49 -TTLEAKLFVFDLKTLHREK----G------FA-YLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGS-LNLWQLVSALRA 115 (174)
Q Consensus 49 -~s~Dg~I~iWD~~~~~~~~----~------~~-~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~-V~lWd~~~~~~~ 115 (174)
|+.||+|+|||+++..... . .+ ...+.+|.. +|++++|+| ++.+||||+.||+ |+|||++
T Consensus 154 sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~-~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~----- 226 (355)
T 3vu4_A 154 NEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTN-PIKMVRLNR-KSDMVATCSQDGTIIRVFKTE----- 226 (355)
T ss_dssp ESSCTTCEEEEECCC------------------CCEEECCCSS-CEEEEEECT-TSSEEEEEETTCSEEEEEETT-----
T ss_pred CCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCC-ceEEEEECC-CCCEEEEEeCCCCEEEEEECC-----
Confidence 4677888888887643100 0 01 345679999 999999999 5679999999999 9999991
Q ss_pred cccccceeeeecCCCCCCcccCCCCCccccccccceeeeee-c-cccceeeeeeCCCCCC
Q psy6415 116 DTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEAT-L-SSQPINSLDWSADKLG 173 (174)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~-~-h~~~V~~l~~spd~~~ 173 (174)
+ ++++.++. + |..+|++++||||++-
T Consensus 227 -----------------------~---------~~~~~~~~~g~h~~~v~~~~~s~~~~~ 254 (355)
T 3vu4_A 227 -----------------------D---------GVLVREFRRGLDRADVVDMKWSTDGSK 254 (355)
T ss_dssp -----------------------T---------CCEEEEEECTTCCSCEEEEEECTTSCE
T ss_pred -----------------------C---------CcEEEEEEcCCCCCcEEEEEECCCCCE
Confidence 2 34678887 6 9999999999999864
No 67
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.84 E-value=5.9e-20 Score=149.09 Aligned_cols=99 Identities=17% Similarity=0.350 Sum_probs=85.3
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEee----c---CCCEEEEEecCCCCCCCEEEEEeCC---CcEEEEECCCccccccee
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETN----L---KNGVCGVDFDRRDIPMNKLVATTLE---AKLFVFDLKTLHREKGFA 70 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~----~---~~~V~sv~f~~~~~~~~~l~s~s~D---g~I~iWD~~~~~~~~~~~ 70 (174)
+|++|+.||.|++||+++++...... | ...|.+++|+|++ +.|++++.| +.|++||+++.++.
T Consensus 199 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~---~~l~~~~~d~~~g~i~i~d~~~~~~~---- 271 (397)
T 1sq9_A 199 LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG---SLLAIAHDSNSFGCITLYETEFGERI---- 271 (397)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSST---TEEEEEEEETTEEEEEEEETTTCCEE----
T ss_pred eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCC---CEEEEEecCCCCceEEEEECCCCccc----
Confidence 47899999999999999988776654 4 7889999999974 899999999 99999999986543
Q ss_pred eeeecc-------------cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 71 YLSEKA-------------HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 71 ~~~~~~-------------h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
..+.. |.. .|.+++|+| ++.+||+++.||+|++||+
T Consensus 272 -~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~-~~~~l~~~~~dg~i~iwd~ 320 (397)
T 1sq9_A 272 -GSLSVPTHSSQASLGEFAHSS-WVMSLSFND-SGETLCSAGWDGKLRFWDV 320 (397)
T ss_dssp -EEECBC--------CCBSBSS-CEEEEEECS-SSSEEEEEETTSEEEEEET
T ss_pred -ceeccCcccccccccccccCC-cEEEEEECC-CCCEEEEEeCCCeEEEEEc
Confidence 33445 888 999999999 5679999999999999999
No 68
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.84 E-value=3.9e-20 Score=147.66 Aligned_cols=128 Identities=12% Similarity=0.125 Sum_probs=101.7
Q ss_pred EEEEecCCcEEEEECCCCCeEEEee------cCCCEEEEEecCCCCC-CCEEEEEeCCCcEEEEECCCcccccceeeeee
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETN------LKNGVCGVDFDRRDIP-MNKLVATTLEAKLFVFDLKTLHREKGFAYLSE 74 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~------~~~~V~sv~f~~~~~~-~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~ 74 (174)
+++++.++.|++||+++++...... +...|++++|+|+... ++.|++|+.|++|+|||+++.+. ...+
T Consensus 37 ~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~-----~~~~ 111 (366)
T 3k26_A 37 VFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQC-----IKHY 111 (366)
T ss_dssp EEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCE-----EEEE
T ss_pred EEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceE-----eeee
Confidence 5667777899999999776543322 4577999999997321 35899999999999999998654 3345
Q ss_pred cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeee
Q psy6415 75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQE 154 (174)
Q Consensus 75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~ 154 (174)
.+|.. .|.+++|+|.++.+||+|+.||+|++||++ . ++.+..
T Consensus 112 ~~~~~-~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~----------------------------~---------~~~~~~ 153 (366)
T 3k26_A 112 VGHGN-AINELKFHPRDPNLLLSVSKDHALRLWNIQ----------------------------T---------DTLVAI 153 (366)
T ss_dssp ESCCS-CEEEEEECSSCTTEEEEEETTSCEEEEETT----------------------------T---------TEEEEE
T ss_pred cCCCC-cEEEEEECCCCCCEEEEEeCCCeEEEEEee----------------------------c---------CeEEEE
Confidence 68998 999999999667899999999999999991 1 123444
Q ss_pred e---eccccceeeeeeCCCCC
Q psy6415 155 A---TLSSQPINSLDWSADKL 172 (174)
Q Consensus 155 ~---~~h~~~V~~l~~spd~~ 172 (174)
+ .+|..+|.+++|+|+++
T Consensus 154 ~~~~~~~~~~v~~~~~~~~~~ 174 (366)
T 3k26_A 154 FGGVEGHRDEVLSADYDLLGE 174 (366)
T ss_dssp ECSTTSCSSCEEEEEECTTSS
T ss_pred ecccccccCceeEEEECCCCC
Confidence 4 78999999999999975
No 69
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.84 E-value=1.9e-20 Score=170.18 Aligned_cols=103 Identities=11% Similarity=0.134 Sum_probs=88.3
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceee-------ee
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAY-------LS 73 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~-------~~ 73 (174)
+||+|+.|++|+|||++++++.....+...|++++|+|++ ++|++|+.||+|++||+++.... .+.. ..
T Consensus 71 ~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g---~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~~~~ 146 (902)
T 2oaj_A 71 YLVVINAKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASL---DWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKSSFF 146 (902)
T ss_dssp EEEEEETTCEEEEEETTTCSEEEEEECSSCEEEEECCTTC---SEEEEEETTSCEEEEETTTTEEE-EEEECCHHHHHTC
T ss_pred EEEEEECcCeEEEEECCCCcEEEEEcCCCCEEEEEECCCC---CEEEEEcCCCcEEEEECCCCccc-cceeccccccccc
Confidence 3899999999999999999988777777889999999974 89999999999999999986532 1111 23
Q ss_pred ecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 74 EKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 74 ~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
+.+|.. +|++++|+|++..+|++|+.||+| |||+
T Consensus 147 ~~~h~~-~V~sl~~sp~~~~~l~~g~~dg~v-lWd~ 180 (902)
T 2oaj_A 147 PAARLS-PIVSIQWNPRDIGTVLISYEYVTL-TYSL 180 (902)
T ss_dssp SSSCCC-CCCEEEEETTEEEEEEEECSSCEE-EEET
T ss_pred cccCCC-CeEEEEEccCCCCEEEEEeCCCcE-EEEC
Confidence 467888 999999999766789999999999 9999
No 70
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.84 E-value=1.2e-19 Score=149.18 Aligned_cols=125 Identities=11% Similarity=0.216 Sum_probs=105.4
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+||+|+.||.|++||+++++..... .|...|.+++|++ +.|++++.|+.|++||++.... ....+.+|..
T Consensus 148 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~ 218 (401)
T 4aez_A 148 FLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNR-----HVLSSGSRSGAIHHHDVRIANH----QIGTLQGHSS 218 (401)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEET-----TEEEEEETTSEEEEEETTSSSC----EEEEEECCSS
T ss_pred EEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECC-----CEEEEEcCCCCEEEEecccCcc----eeeEEcCCCC
Confidence 4799999999999999998877665 4678899999975 7899999999999999995331 2345568999
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS 159 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~ 159 (174)
.|.+++|+| ++.+||+|+.||+|++||+. . .+.+.++.+|.
T Consensus 219 -~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~----------------------------~---------~~~~~~~~~~~ 259 (401)
T 4aez_A 219 -EVCGLAWRS-DGLQLASGGNDNVVQIWDAR----------------------------S---------SIPKFTKTNHN 259 (401)
T ss_dssp -CEEEEEECT-TSSEEEEEETTSCEEEEETT----------------------------C---------SSEEEEECCCS
T ss_pred -CeeEEEEcC-CCCEEEEEeCCCeEEEccCC----------------------------C---------CCccEEecCCc
Confidence 999999999 56799999999999999991 1 23577888999
Q ss_pred cceeeeeeCCCCCC
Q psy6415 160 QPINSLDWSADKLG 173 (174)
Q Consensus 160 ~~V~~l~~spd~~~ 173 (174)
.+|.+++|+|++..
T Consensus 260 ~~v~~~~~~p~~~~ 273 (401)
T 4aez_A 260 AAVKAVAWCPWQSN 273 (401)
T ss_dssp SCCCEEEECTTSTT
T ss_pred ceEEEEEECCCCCC
Confidence 99999999998764
No 71
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.84 E-value=9.7e-20 Score=149.81 Aligned_cols=163 Identities=17% Similarity=0.214 Sum_probs=112.6
Q ss_pred CEEEEecCCcEEEEECCC-CCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415 1 MVVAGYDNGDLKMFDLKT-MSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK 78 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~-~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~ 78 (174)
+|++|+.||.|++||++. +..... ..|...|++++|+|++ +.|++|+.|+.|++||+++.++ ...+..|.
T Consensus 188 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~s~~~d~~v~iwd~~~~~~-----~~~~~~~~ 259 (401)
T 4aez_A 188 VLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDG---LQLASGGNDNVVQIWDARSSIP-----KFTKTNHN 259 (401)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTCSSE-----EEEECCCS
T ss_pred EEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCC---CEEEEEeCCCeEEEccCCCCCc-----cEEecCCc
Confidence 478999999999999984 443333 4577889999999964 8999999999999999998653 33456788
Q ss_pred cCcEEEEEEcCCCCCEEEEEc--CCCcEEEEeccccccccccccceeeeecCC-CCCCcccC----CCCCcccc--ccc-
Q psy6415 79 ATTVWAAKHLPQNRDLFVTCG--GSGSLNLWQLVSALRADTNLCSIFRYSSNY-PTQRTKPD----IDDIPMGV--PGS- 148 (174)
Q Consensus 79 ~~~i~~v~fsP~~~~~las~s--~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~dg~~~~~--~~~- 148 (174)
. .|.+++|+|++..++++|+ .||.|++||+.+......-..........+ |++..++. .||. +.+ ...
T Consensus 260 ~-~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~-i~v~~~~~~ 337 (401)
T 4aez_A 260 A-AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNN-LSIWSYSSS 337 (401)
T ss_dssp S-CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCE-EEEEEEETT
T ss_pred c-eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCc-EEEEecCCc
Confidence 8 9999999998888999976 799999999944111000000001112222 33332221 2331 111 122
Q ss_pred -cceeeeeeccccceeeeeeCCCCCC
Q psy6415 149 -LTLLQEATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 149 -~~ll~~~~~h~~~V~~l~~spd~~~ 173 (174)
...+..+.+|..+|.+++||||++-
T Consensus 338 ~~~~~~~~~~h~~~v~~~~~s~dg~~ 363 (401)
T 4aez_A 338 GLTKQVDIPAHDTRVLYSALSPDGRI 363 (401)
T ss_dssp EEEEEEEEECCSSCCCEEEECTTSSE
T ss_pred cceeEEEecCCCCCEEEEEECCCCCE
Confidence 2345567899999999999999863
No 72
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.84 E-value=1.8e-20 Score=154.85 Aligned_cols=100 Identities=16% Similarity=0.180 Sum_probs=84.4
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEee---cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec-c
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETN---LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK-A 76 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~---~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~-~ 76 (174)
+|++|+.||+|++||++++++..... |...|++++|+|++ +.|++|+.||+|+|||+++.++.. ++. .
T Consensus 184 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~---~~l~s~~~dg~i~iwd~~~~~~~~-----~~~~~ 255 (437)
T 3gre_A 184 LLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEEC---CVLILGTTRGIIDIWDIRFNVLIR-----SWSFG 255 (437)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTS---CEEEEEETTSCEEEEETTTTEEEE-----EEBCT
T ss_pred EEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCC---CEEEEEcCCCeEEEEEcCCccEEE-----EEecC
Confidence 47999999999999999998876654 56889999999974 899999999999999999865432 332 6
Q ss_pred cCcCcEEEEEEcCC---CCCEEEEEcCCCcEEEEec
Q psy6415 77 HKATTVWAAKHLPQ---NRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 77 h~~~~i~~v~fsP~---~~~~las~s~Dg~V~lWd~ 109 (174)
|.. .|.+++|+|. ++.+||+|+.||+|++||+
T Consensus 256 ~~~-~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~ 290 (437)
T 3gre_A 256 DHA-PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNF 290 (437)
T ss_dssp TCE-EEEEEEECTTTCTTEEEEEEESTTEEEEEEET
T ss_pred CCC-ceEEEEeccccCCCccEEEEEcCCCcEEEEEc
Confidence 777 8999977662 4569999999999999999
No 73
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.84 E-value=9.9e-20 Score=151.45 Aligned_cols=163 Identities=15% Similarity=0.179 Sum_probs=114.6
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+|++|+.||+|++||++++++..... |...|.+++|+|+ +.|++|+.|++|++||+++.++ ...+.+|..
T Consensus 134 ~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~----~~l~s~s~dg~i~vwd~~~~~~-----~~~~~~h~~ 204 (464)
T 3v7d_B 134 YVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG----GILVSGSTDRTVRVWDIKKGCC-----THVFEGHNS 204 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECST----TEEEEEETTSCEEEEETTTTEE-----EEEECCCSS
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCC----CEEEEEeCCCCEEEEECCCCcE-----EEEECCCCC
Confidence 48999999999999999998876654 7789999999985 5899999999999999998653 345568999
Q ss_pred CcEEEEEEcCC-CCCEEEEEcCCCcEEEEeccccccccccc------------------cceeeeecCC-----CCCCcc
Q psy6415 80 TTVWAAKHLPQ-NRDLFVTCGGSGSLNLWQLVSALRADTNL------------------CSIFRYSSNY-----PTQRTK 135 (174)
Q Consensus 80 ~~i~~v~fsP~-~~~~las~s~Dg~V~lWd~~~~~~~~~~~------------------~~~~~~~~~~-----~~~~~~ 135 (174)
.|.+++|+|. ++.+|++|+.||+|++||+.+........ ...+..+... +.+..+
T Consensus 205 -~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l 283 (464)
T 3v7d_B 205 -TVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIV 283 (464)
T ss_dssp -CEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEE
T ss_pred -ccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEE
Confidence 9999999952 55789999999999999995421110000 0000000000 001111
Q ss_pred --cCCCCCcc-ccccccceeeeeeccccceeeeeeCCCCCC
Q psy6415 136 --PDIDDIPM-GVPGSLTLLQEATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 136 --~~~dg~~~-~~~~~~~ll~~~~~h~~~V~~l~~spd~~~ 173 (174)
...||... -...+++.+.++.+|..+|.+++|+|+++-
T Consensus 284 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 324 (464)
T 3v7d_B 284 VSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKR 324 (464)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTE
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCE
Confidence 11333211 012455788999999999999999999763
No 74
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.84 E-value=2.1e-20 Score=153.00 Aligned_cols=126 Identities=11% Similarity=0.086 Sum_probs=100.9
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
+|++|+.||+|++||+.+++..........+....|+|+ ++.|++|+.|+.|+|||+++.+. ...+.+|..
T Consensus 70 ~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~-----~~~~~~h~~- 140 (420)
T 3vl1_A 70 HLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQ---MRRFILGTTEGDIKVLDSNFNLQ-----REIDQAHVS- 140 (420)
T ss_dssp TEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSS---SCEEEEEETTSCEEEECTTSCEE-----EEETTSSSS-
T ss_pred eEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecC---CCEEEEEECCCCEEEEeCCCcce-----eeecccccC-
Confidence 489999999999999987655433333333445567876 48999999999999999987643 334468999
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ 160 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~ 160 (174)
.|.+++|+| ++.+||+|+.||+|++||++ + ++.+.++.+|..
T Consensus 141 ~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~----------------------------~---------~~~~~~~~~h~~ 182 (420)
T 3vl1_A 141 EITKLKFFP-SGEALISSSQDMQLKIWSVK----------------------------D---------GSNPRTLIGHRA 182 (420)
T ss_dssp CEEEEEECT-TSSEEEEEETTSEEEEEETT----------------------------T---------CCCCEEEECCSS
T ss_pred ccEEEEECC-CCCEEEEEeCCCeEEEEeCC----------------------------C---------CcCceEEcCCCC
Confidence 999999999 56799999999999999991 1 235778889999
Q ss_pred ceeeeeeCCCCCC
Q psy6415 161 PINSLDWSADKLG 173 (174)
Q Consensus 161 ~V~~l~~spd~~~ 173 (174)
+|.+++|+||++-
T Consensus 183 ~v~~~~~~~~~~~ 195 (420)
T 3vl1_A 183 TVTDIAIIDRGRN 195 (420)
T ss_dssp CEEEEEEETTTTE
T ss_pred cEEEEEEcCCCCE
Confidence 9999999999863
No 75
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.83 E-value=2.5e-19 Score=141.50 Aligned_cols=162 Identities=14% Similarity=0.087 Sum_probs=109.2
Q ss_pred CEEEEecCCcEEEEECCCCCe--EEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSL--KWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH 77 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~--~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h 77 (174)
+|++|+.||.|++||+++++. ... ..+...|.+++|+|++ +.|++++.|+.|++||+++.+. ...+..|
T Consensus 111 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~dg~v~~~d~~~~~~-----~~~~~~~ 182 (337)
T 1gxr_A 111 TLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDS---KVCFSCCSDGNIAVWDLHNQTL-----VRQFQGH 182 (337)
T ss_dssp EEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEE-----EEEECCC
T ss_pred EEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCC---CEEEEEeCCCcEEEEeCCCCce-----eeeeecc
Confidence 378999999999999998873 333 3456789999999964 8999999999999999998653 3345678
Q ss_pred CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCC-CCCCccc--CCCCCcccc-ccccceee
Q psy6415 78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNY-PTQRTKP--DIDDIPMGV-PGSLTLLQ 153 (174)
Q Consensus 78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~dg~~~~~-~~~~~ll~ 153 (174)
.. .|.+++|+| ++..|++++.||.|++||+++.................+ |++..+. ..+|...-- .... .+.
T Consensus 183 ~~-~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~-~~~ 259 (337)
T 1gxr_A 183 TD-GASCIDISN-DGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP-DKY 259 (337)
T ss_dssp SS-CEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSS-CEE
T ss_pred cC-ceEEEEECC-CCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC-CeE
Confidence 88 999999999 567899999999999999944111000000000111222 3332221 123321100 1122 244
Q ss_pred eeeccccceeeeeeCCCCCC
Q psy6415 154 EATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 154 ~~~~h~~~V~~l~~spd~~~ 173 (174)
.+.+|..+|.+++|+||++-
T Consensus 260 ~~~~~~~~v~~~~~~~~~~~ 279 (337)
T 1gxr_A 260 QLHLHESCVLSLKFAYCGKW 279 (337)
T ss_dssp EECCCSSCEEEEEECTTSSE
T ss_pred EEcCCccceeEEEECCCCCE
Confidence 67889999999999999863
No 76
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.83 E-value=2.3e-20 Score=153.73 Aligned_cols=103 Identities=9% Similarity=0.198 Sum_probs=80.5
Q ss_pred EEEEecCCcEEEEECCCCCeE-----------------------------------------EEeecCCCEEEEEecCCC
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLK-----------------------------------------WETNLKNGVCGVDFDRRD 40 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~-----------------------------------------~~~~~~~~V~sv~f~~~~ 40 (174)
|++|+.||+|++||++++... ....|...|.+++|+|++
T Consensus 110 l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 189 (447)
T 3dw8_B 110 FLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDY 189 (447)
T ss_dssp EEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTS
T ss_pred EEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCC
Confidence 789999999999999764431 112467889999999974
Q ss_pred CCCCEEEEEeCCCcEEEEECCCcc-cccce--eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 41 IPMNKLVATTLEAKLFVFDLKTLH-REKGF--AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 41 ~~~~~l~s~s~Dg~I~iWD~~~~~-~~~~~--~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
+.|++| .|++|+|||+++.. +...+ ....+.+|.. .|++++|+|+++.+||+|+.||+|++||+
T Consensus 190 ---~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 190 ---ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTE-VITAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp ---SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCC-CEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred ---CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCc-ceEEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 889998 89999999999432 11100 0013568888 99999999965589999999999999999
No 77
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.83 E-value=4.4e-20 Score=157.24 Aligned_cols=127 Identities=16% Similarity=0.295 Sum_probs=105.3
Q ss_pred CEEEEec-CCcEEEEECCCCCeE-EE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc-
Q psy6415 1 MVVAGYD-NGDLKMFDLKTMSLK-WE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA- 76 (174)
Q Consensus 1 ~lasgs~-Dg~iklWDl~~~~~~-~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~- 76 (174)
+|++|+. ||.|++||+.++... .. ..|...|.+++|+|++ +.|++++.|+.|+|||+++.+.. ..+.+
T Consensus 458 ~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g---~~l~~~~~dg~i~iw~~~~~~~~-----~~~~~~ 529 (615)
T 1pgu_A 458 YVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSE---TYIAAGDVMGKILLYDLQSREVK-----TSRWAF 529 (615)
T ss_dssp EEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEEE-----ECCSCC
T ss_pred EEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCC---CEEEEcCCCCeEEEeeCCCCcce-----eEeecC
Confidence 3788999 999999999987664 22 3467889999999974 89999999999999999986543 33445
Q ss_pred cCcCcEEEEEEcCC---------CCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccccc
Q psy6415 77 HKATTVWAAKHLPQ---------NRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPG 147 (174)
Q Consensus 77 h~~~~i~~v~fsP~---------~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~ 147 (174)
|.. .|++++|+|. ++.+||+|+.||+|++||++ ++
T Consensus 530 h~~-~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~----------------------------~~------- 573 (615)
T 1pgu_A 530 RTS-KINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVK----------------------------RP------- 573 (615)
T ss_dssp CSS-CEEEEEECCCC------CCSCCEEEEEETTSCEEEEESS----------------------------CT-------
T ss_pred CCC-ceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECC----------------------------CC-------
Confidence 888 9999999992 35699999999999999991 11
Q ss_pred ccceeeeeeccccceeeeeeCCCCC
Q psy6415 148 SLTLLQEATLSSQPINSLDWSADKL 172 (174)
Q Consensus 148 ~~~ll~~~~~h~~~V~~l~~spd~~ 172 (174)
.+++..+.+|..+|++++|+||++
T Consensus 574 -~~~~~~~~~h~~~v~~l~~s~~~~ 597 (615)
T 1pgu_A 574 -MKIIKALNAHKDGVNNLLWETPST 597 (615)
T ss_dssp -TCCEEETTSSTTCEEEEEEEETTE
T ss_pred -ceechhhhcCccceEEEEEcCCCC
Confidence 146788899999999999999986
No 78
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.83 E-value=2.7e-19 Score=144.75 Aligned_cols=146 Identities=16% Similarity=0.207 Sum_probs=111.7
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
+|++|+.||.|++||+++++......+...+.+++|+|...++..+++++.|+.|++||+++.+.. ..+..|..
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-----~~~~~~~~- 187 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS-----HILQGHRQ- 187 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC-----EEECCCCS-
T ss_pred EEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee-----eeecCCCC-
Confidence 489999999999999999988877778889999999997544568999999999999999986543 34568888
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ 160 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~ 160 (174)
.|.+++|+|++..+||+|+.||.|++||+.+ ... ....+.. .++. ....+...+.+|..
T Consensus 188 ~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~----~~~--~~~~~~~----------~~~~-----~~~~~~~~~~~~~~ 246 (408)
T 4a11_B 188 EILAVSWSPRYDYILATASADSRVKLWDVRR----ASG--CLITLDQ----------HNGK-----KSQAVESANTAHNG 246 (408)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTC----SSC--CSEECCT----------TTTC-----SCCCTTTSSCSCSS
T ss_pred cEEEEEECCCCCcEEEEEcCCCcEEEEECCC----CCc--ccccccc----------cccc-----cceeeccccccccC
Confidence 9999999997666899999999999999921 100 0000000 0110 01124556678999
Q ss_pred ceeeeeeCCCCCC
Q psy6415 161 PINSLDWSADKLG 173 (174)
Q Consensus 161 ~V~~l~~spd~~~ 173 (174)
+|++++|+||++-
T Consensus 247 ~v~~~~~~~~~~~ 259 (408)
T 4a11_B 247 KVNGLCFTSDGLH 259 (408)
T ss_dssp CEEEEEECTTSSE
T ss_pred ceeEEEEcCCCCE
Confidence 9999999999863
No 79
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.83 E-value=3e-19 Score=144.45 Aligned_cols=168 Identities=13% Similarity=0.126 Sum_probs=111.8
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc-cce---------
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE-KGF--------- 69 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~-~~~--------- 69 (174)
+|++|+.||.|++||+++++...... |...|.+++|+|++ ...|++++.|+.|++||+++.... ..+
T Consensus 158 ~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~--~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 235 (408)
T 4a11_B 158 LVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRY--DYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQ 235 (408)
T ss_dssp EEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSC--TTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCC
T ss_pred EEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCC--CcEEEEEcCCCcEEEEECCCCCcccccccccccccce
Confidence 37899999999999999888766554 67889999999974 236899999999999999875411 100
Q ss_pred -eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccccccc---------ccceeeeecCCCCCCcccCCC
Q psy6415 70 -AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTN---------LCSIFRYSSNYPTQRTKPDID 139 (174)
Q Consensus 70 -~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~d 139 (174)
.......|.. .|.+++|+| ++..|++++.||.|++||+.+..+.... ....+...............+
T Consensus 236 ~~~~~~~~~~~-~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (408)
T 4a11_B 236 AVESANTAHNG-KVNGLCFTS-DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG 313 (408)
T ss_dssp CTTTSSCSCSS-CEEEEEECT-TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET
T ss_pred eeccccccccC-ceeEEEEcC-CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC
Confidence 0111246888 999999999 5678999999999999999441110000 000000000000000000112
Q ss_pred CCcccc--ccccceeeeeeccccceeeeeeCCCCCC
Q psy6415 140 DIPMGV--PGSLTLLQEATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 140 g~~~~~--~~~~~ll~~~~~h~~~V~~l~~spd~~~ 173 (174)
| .+.+ ..+++++.++.+|..+|.+++|+||++-
T Consensus 314 ~-~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 348 (408)
T 4a11_B 314 S-TIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQE 348 (408)
T ss_dssp T-EEEEEETTTCCEEEEECCCSSCEEEEEEETTTTE
T ss_pred C-EEEEEECcCCcceeeeccCCCeEEEEEEcCCCCE
Confidence 2 1111 2445788999999999999999999863
No 80
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.83 E-value=1.3e-19 Score=145.50 Aligned_cols=130 Identities=9% Similarity=0.037 Sum_probs=103.3
Q ss_pred CEEEEecCCcEEEEECCCCCe---EEE--eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccc----------
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSL---KWE--TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHR---------- 65 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~---~~~--~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~---------- 65 (174)
+|++|+.||.|++||++++.. ... ..|...|.+++|+|++ +.|++++.|+.|++||++....
T Consensus 110 ~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~ 186 (372)
T 1k8k_C 110 KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNS---VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWG 186 (372)
T ss_dssp EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTS---SEEEEEETTSCEEEEECCCTTTSCCCCCBTTB
T ss_pred EEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCC---CEEEEEcCCCCEEEEEcccccccccccccccc
Confidence 478999999999999988762 222 2356789999999964 8999999999999999753210
Q ss_pred ---ccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCc
Q psy6415 66 ---EKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIP 142 (174)
Q Consensus 66 ---~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~ 142 (174)
........+..|.. .|.+++|+| ++.+|++++.||+|++||++
T Consensus 187 ~~~~~~~~~~~~~~~~~-~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~-------------------------------- 232 (372)
T 1k8k_C 187 SKMPFGELMFESSSSCG-WVHGVCFSA-NGSRVAWVSHDSTVCLADAD-------------------------------- 232 (372)
T ss_dssp SCCCTTCEEEECCCCSS-CEEEEEECS-SSSEEEEEETTTEEEEEEGG--------------------------------
T ss_pred cccchhhheEecCCCCC-eEEEEEECC-CCCEEEEEeCCCEEEEEECC--------------------------------
Confidence 01123445568888 999999999 56799999999999999991
Q ss_pred cccccccceeeeeeccccceeeeeeCCCCC
Q psy6415 143 MGVPGSLTLLQEATLSSQPINSLDWSADKL 172 (174)
Q Consensus 143 ~~~~~~~~ll~~~~~h~~~V~~l~~spd~~ 172 (174)
+++++.++.+|..+|++++|+|+++
T Consensus 233 -----~~~~~~~~~~~~~~v~~~~~~~~~~ 257 (372)
T 1k8k_C 233 -----KKMAVATLASETLPLLAVTFITESS 257 (372)
T ss_dssp -----GTTEEEEEECSSCCEEEEEEEETTE
T ss_pred -----CCceeEEEccCCCCeEEEEEecCCC
Confidence 1246788899999999999999975
No 81
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.83 E-value=2e-19 Score=165.78 Aligned_cols=126 Identities=17% Similarity=0.173 Sum_probs=108.6
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+||+|+.||+|++||+.+++..... .|...|.+++|+|++ +.||+++.|++|+|||++++++ ..++.+|..
T Consensus 629 ~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~---~~l~s~~~d~~v~vwd~~~~~~-----~~~~~~~~~ 700 (1249)
T 3sfz_A 629 RIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDD---SYIATCSADKKVKIWDSATGKL-----VHTYDEHSE 700 (1249)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTCCE-----EEEEECCSS
T ss_pred EEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCC---CEEEEEeCCCeEEEEECCCCce-----EEEEcCCCC
Confidence 4799999999999999999887665 477889999999974 8999999999999999998754 345568999
Q ss_pred CcEEEEEEcCC-CCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecc
Q psy6415 80 TTVWAAKHLPQ-NRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLS 158 (174)
Q Consensus 80 ~~i~~v~fsP~-~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h 158 (174)
.|++++|+|+ +..++++|+.||+|++||++ . ++.+.++.+|
T Consensus 701 -~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~----------------------------~---------~~~~~~~~~h 742 (1249)
T 3sfz_A 701 -QVNCCHFTNKSNHLLLATGSNDFFLKLWDLN----------------------------Q---------KECRNTMFGH 742 (1249)
T ss_dssp -CEEEEEECSSSSCCEEEEEETTSCEEEEETT----------------------------S---------SSEEEEECCC
T ss_pred -cEEEEEEecCCCceEEEEEeCCCeEEEEECC----------------------------C---------cchhheecCC
Confidence 9999999995 34589999999999999991 1 2467888999
Q ss_pred ccceeeeeeCCCCC
Q psy6415 159 SQPINSLDWSADKL 172 (174)
Q Consensus 159 ~~~V~~l~~spd~~ 172 (174)
..+|++++|+||++
T Consensus 743 ~~~v~~~~~sp~~~ 756 (1249)
T 3sfz_A 743 TNSVNHCRFSPDDE 756 (1249)
T ss_dssp SSCEEEEEECSSTT
T ss_pred CCCEEEEEEecCCC
Confidence 99999999999986
No 82
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.82 E-value=1.6e-19 Score=144.05 Aligned_cols=153 Identities=18% Similarity=0.283 Sum_probs=106.3
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+|++|+.||+|++||+++++...... |...|.+++|+|.+ ++.|++++.|++|+|||+++.+....+ ..+.+|..
T Consensus 87 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~~~~~~ 162 (366)
T 3k26_A 87 LLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRD--PNLLLSVSKDHALRLWNIQTDTLVAIF--GGVEGHRD 162 (366)
T ss_dssp EEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSC--TTEEEEEETTSCEEEEETTTTEEEEEE--CSTTSCSS
T ss_pred EEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCC--CCEEEEEeCCCeEEEEEeecCeEEEEe--cccccccC
Confidence 38999999999999999998876654 77889999999932 489999999999999999986543211 11257888
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCC-CCCCcccCCCCCccccccccceeeeeecc
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNY-PTQRTKPDIDDIPMGVPGSLTLLQEATLS 158 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dg~~~~~~~~~~ll~~~~~h 158 (174)
.|.+++|+| ++..|++++.||+|++||+++.... ..+.....+ |+........ .......+....+|
T Consensus 163 -~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 230 (366)
T 3k26_A 163 -EVLSADYDL-LGEKIMSCGMDHSLKLWRINSKRMM-----NAIKESYDYNPNKTNRPFIS-----QKIHFPDFSTRDIH 230 (366)
T ss_dssp -CEEEEEECT-TSSEEEEEETTSCEEEEESCSHHHH-----HHHHHHHTCCGGGCSSCCCC-----EEECCCSEEECSSC
T ss_pred -ceeEEEECC-CCCEEEEecCCCCEEEEECCCCccc-----cccceeEEecCCCCcccccc-----eeeccCccccccCC
Confidence 999999999 5678999999999999999331000 001111111 1111000000 00111245666789
Q ss_pred ccceeeeeeCC
Q psy6415 159 SQPINSLDWSA 169 (174)
Q Consensus 159 ~~~V~~l~~sp 169 (174)
..+|.+++|++
T Consensus 231 ~~~v~~~~~~~ 241 (366)
T 3k26_A 231 RNYVDCVRWLG 241 (366)
T ss_dssp SSCCCEEEEET
T ss_pred cceEEEEEEcC
Confidence 99999999983
No 83
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.82 E-value=1.5e-19 Score=147.28 Aligned_cols=95 Identities=12% Similarity=0.169 Sum_probs=80.0
Q ss_pred EecCCcEEEEECCCCC-----------------eEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCc-EEEEECCCcccc
Q psy6415 5 GYDNGDLKMFDLKTMS-----------------LKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAK-LFVFDLKTLHRE 66 (174)
Q Consensus 5 gs~Dg~iklWDl~~~~-----------------~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~-I~iWD~~~~~~~ 66 (174)
|+.||+|++||++++. ......|...|++++|+|++ ++||+|+.|++ |+|||+++.++.
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g---~~l~s~s~d~~~v~iwd~~~~~~~ 231 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS---DMVATCSQDGTIIRVFKTEDGVLV 231 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTS---SEEEEEETTCSEEEEEETTTCCEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCC---CEEEEEeCCCCEEEEEECCCCcEE
Confidence 6899999999999865 33334578899999999974 89999999998 999999987643
Q ss_pred cceeeeeec-c-cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 67 KGFAYLSEK-A-HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 67 ~~~~~~~~~-~-h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.++. + |.. .|++++|+| ++.+||+|+.|++|++||+
T Consensus 232 -----~~~~~g~h~~-~v~~~~~s~-~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 232 -----REFRRGLDRA-DVVDMKWST-DGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp -----EEEECTTCCS-CEEEEEECT-TSCEEEEEETTCEEEEEES
T ss_pred -----EEEEcCCCCC-cEEEEEECC-CCCEEEEEECCCEEEEEEc
Confidence 3444 4 888 999999999 5679999999999999999
No 84
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.82 E-value=8.2e-19 Score=139.11 Aligned_cols=163 Identities=12% Similarity=0.082 Sum_probs=109.1
Q ss_pred CEEEEecCCcEEEEECCCCCe-----EEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSL-----KWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE 74 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~-----~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~ 74 (174)
+||||+.||+|+|||+++.+. ... ..|...|.+++|+|++ +.|++++.|+.|++|+....... ...
T Consensus 53 ~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg---~~l~s~~~d~~i~~~~~~~~~~~-----~~~ 124 (340)
T 4aow_A 53 MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG---QFALSGSWDGTLRLWDLTTGTTT-----RRF 124 (340)
T ss_dssp EEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTTEEE-----EEE
T ss_pred EEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCC---CEEEEEcccccceEEeeccccee-----eee
Confidence 489999999999999987542 222 3467889999999974 89999999999999999875432 233
Q ss_pred cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccc----cccccceeeeecCC-CCCCcc--cCCCCCcc-ccc
Q psy6415 75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRA----DTNLCSIFRYSSNY-PTQRTK--PDIDDIPM-GVP 146 (174)
Q Consensus 75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~----~~~~~~~~~~~~~~-~~~~~~--~~~dg~~~-~~~ 146 (174)
..+.. .+..+.++|. +..|++|+.||.+++||+....+. ......+..+.... +..... ...|+... ...
T Consensus 125 ~~~~~-~~~~~~~~~~-~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~ 202 (340)
T 4aow_A 125 VGHTK-DVLSVAFSSD-NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 202 (340)
T ss_dssp ECCSS-CEEEEEECTT-SSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEET
T ss_pred cCCCC-ceeEEEEeec-CccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEEC
Confidence 45666 7889999995 568899999999999998431110 00000111111010 111111 11233110 112
Q ss_pred cccceeeeeeccccceeeeeeCCCCCC
Q psy6415 147 GSLTLLQEATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 147 ~~~~ll~~~~~h~~~V~~l~~spd~~~ 173 (174)
.+.+++.++.+|..+|++|+|+||++-
T Consensus 203 ~~~~~~~~~~~h~~~v~~~~~s~~~~~ 229 (340)
T 4aow_A 203 ANCKLKTNHIGHTGYLNTVTVSPDGSL 229 (340)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred CCCceeeEecCCCCcEEEEEECCCCCE
Confidence 445688899999999999999999863
No 85
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.82 E-value=6.2e-19 Score=139.21 Aligned_cols=124 Identities=15% Similarity=0.185 Sum_probs=103.8
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
.|++|+.||.|++||+++++......+...+.+++|+|++ +.|++++.|+.|++||+++.+. ..+..|..
T Consensus 197 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~~~~i~~~~~~~~~~------~~~~~~~~- 266 (337)
T 1gxr_A 197 KLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTG---EWLAVGMESSNVEVLHVNKPDK------YQLHLHES- 266 (337)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTS---SEEEEEETTSCEEEEETTSSCE------EEECCCSS-
T ss_pred EEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCC---CEEEEEcCCCcEEEEECCCCCe------EEEcCCcc-
Confidence 3789999999999999999888777788899999999974 8999999999999999998642 23458888
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ 160 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~ 160 (174)
.|.+++|+| ++.+|++++.||.|++||++ .| +.+.. ..|..
T Consensus 267 ~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~----------------------------~~---------~~~~~-~~~~~ 307 (337)
T 1gxr_A 267 CVLSLKFAY-CGKWFVSTGKDNLLNAWRTP----------------------------YG---------ASIFQ-SKESS 307 (337)
T ss_dssp CEEEEEECT-TSSEEEEEETTSEEEEEETT----------------------------TC---------CEEEE-EECSS
T ss_pred ceeEEEECC-CCCEEEEecCCCcEEEEECC----------------------------CC---------eEEEE-ecCCC
Confidence 999999999 56789999999999999991 11 22322 35789
Q ss_pred ceeeeeeCCCCCC
Q psy6415 161 PINSLDWSADKLG 173 (174)
Q Consensus 161 ~V~~l~~spd~~~ 173 (174)
+|.+++|+||++-
T Consensus 308 ~v~~~~~s~~~~~ 320 (337)
T 1gxr_A 308 SVLSCDISVDDKY 320 (337)
T ss_dssp CEEEEEECTTSCE
T ss_pred cEEEEEECCCCCE
Confidence 9999999999863
No 86
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.82 E-value=2e-19 Score=140.95 Aligned_cols=123 Identities=16% Similarity=0.240 Sum_probs=99.7
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
+|++|+.||.|++||.+.........+...|.+++|+|+ ..|++++.|+.|++||+++.++. ..+.+|..
T Consensus 157 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~- 226 (313)
T 3odt_A 157 KFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDD----GHFISCSNDGLIKLVDMHTGDVL-----RTYEGHES- 226 (313)
T ss_dssp EEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEET----TEEEEEETTSEEEEEETTTCCEE-----EEEECCSS-
T ss_pred EEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcCC----CeEEEccCCCeEEEEECCchhhh-----hhhhcCCc-
Confidence 378999999999999443222222236788999999996 34999999999999999986543 34568888
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ 160 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~ 160 (174)
.|.+++|+|++ .|++++.||+|++||++ + ++++..+..|..
T Consensus 227 ~i~~~~~~~~~--~l~~~~~dg~v~iwd~~----------------------------~---------~~~~~~~~~~~~ 267 (313)
T 3odt_A 227 FVYCIKLLPNG--DIVSCGEDRTVRIWSKE----------------------------N---------GSLKQVITLPAI 267 (313)
T ss_dssp CEEEEEECTTS--CEEEEETTSEEEEECTT----------------------------T---------CCEEEEEECSSS
T ss_pred eEEEEEEecCC--CEEEEecCCEEEEEECC----------------------------C---------CceeEEEeccCc
Confidence 99999999954 47899999999999991 2 246788899999
Q ss_pred ceeeeeeCCCCC
Q psy6415 161 PINSLDWSADKL 172 (174)
Q Consensus 161 ~V~~l~~spd~~ 172 (174)
+|.+++|+||++
T Consensus 268 ~i~~~~~~~~~~ 279 (313)
T 3odt_A 268 SIWSVDCMSNGD 279 (313)
T ss_dssp CEEEEEECTTSC
T ss_pred eEEEEEEccCCC
Confidence 999999999986
No 87
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.82 E-value=2.7e-19 Score=142.64 Aligned_cols=100 Identities=17% Similarity=0.225 Sum_probs=83.9
Q ss_pred CEEEEecCCcEEEEECCC-CCeE-E-EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415 1 MVVAGYDNGDLKMFDLKT-MSLK-W-ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH 77 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~-~~~~-~-~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h 77 (174)
+||+|+.||.|+|||+++ +... . ...|...|++++|+|++ +.|++++.|++|+|||+++.+.. ....|
T Consensus 56 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~~~dg~v~iwd~~~~~~~------~~~~~ 126 (368)
T 3mmy_A 56 FLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDG---SKVFTASCDKTAKMWDLSSNQAI------QIAQH 126 (368)
T ss_dssp EEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTTEEE------EEEEC
T ss_pred EEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCC---CEEEEEcCCCcEEEEEcCCCCce------eeccc
Confidence 489999999999999987 5443 2 24578899999999964 89999999999999999986532 23478
Q ss_pred CcCcEEEEEE--cCCCCCEEEEEcCCCcEEEEeccc
Q psy6415 78 KATTVWAAKH--LPQNRDLFVTCGGSGSLNLWQLVS 111 (174)
Q Consensus 78 ~~~~i~~v~f--sP~~~~~las~s~Dg~V~lWd~~~ 111 (174)
.. .|++++| +| ++.+|++|+.||+|++||+++
T Consensus 127 ~~-~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~ 160 (368)
T 3mmy_A 127 DA-PVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRS 160 (368)
T ss_dssp SS-CEEEEEEEECS-SCEEEEEEETTSEEEEECSSC
T ss_pred cC-ceEEEEEEeCC-CCCEEEEccCCCcEEEEECCC
Confidence 88 9999999 78 566899999999999999954
No 88
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.82 E-value=1.5e-19 Score=147.41 Aligned_cols=106 Identities=17% Similarity=0.324 Sum_probs=85.2
Q ss_pred CEEEEecCCcEEEEECCC----CCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc----cceee
Q psy6415 1 MVVAGYDNGDLKMFDLKT----MSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE----KGFAY 71 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~----~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~----~~~~~ 71 (174)
+||+|+.||.|++||+++ ...... ..|...|++++|+|++ ++.|++++.|++|+|||+++.+.. ..+..
T Consensus 81 ~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 158 (416)
T 2pm9_A 81 IIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQ--DNVLASGGNNGEIFIWDMNKCTESPSNYTPLTP 158 (416)
T ss_dssp CEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSS--TTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCC
T ss_pred eEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCC--CCEEEEEcCCCeEEEEECCCCcccccccccccc
Confidence 589999999999999987 334443 3477889999999973 489999999999999999986510 01112
Q ss_pred eeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 72 LSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 72 ~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.....|.. .|++++|+|+++.+|++++.||+|++||+
T Consensus 159 ~~~~~~~~-~v~~~~~~~~~~~~l~~~~~dg~v~iwd~ 195 (416)
T 2pm9_A 159 GQSMSSVD-EVISLAWNQSLAHVFASAGSSNFASIWDL 195 (416)
T ss_dssp CCSCCSSC-CCCEEEECSSCTTEEEEESSSSCEEEEET
T ss_pred ccccCCCC-CeeEEEeCCCCCcEEEEEcCCCCEEEEEC
Confidence 23357888 99999999976789999999999999999
No 89
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.82 E-value=3.1e-19 Score=143.21 Aligned_cols=147 Identities=12% Similarity=0.053 Sum_probs=107.3
Q ss_pred CEEEEecCCcEEEEECCCCCeEEE---eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWE---TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH 77 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~---~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h 77 (174)
+|++|+.||+|++||+++++.... ..+...|.+++|+|++ +.|++++.|+.|++||++....... .......|
T Consensus 66 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~v~i~d~~~~~~~~~-~~~~~~~~ 141 (372)
T 1k8k_C 66 RIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNE---KKFAVGSGSRVISICYFEQENDWWV-CKHIKKPI 141 (372)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTS---SEEEEEETTSSEEEEEEETTTTEEE-EEEECTTC
T ss_pred EEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCC---CEEEEEeCCCEEEEEEecCCCccee-eeeeeccc
Confidence 478999999999999988875433 3467889999999974 8999999999999999998652110 11222477
Q ss_pred CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415 78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL 157 (174)
Q Consensus 78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~ 157 (174)
.. .|.+++|+| ++.+|++|+.||.|++||++....... +....+.. . ...++++..+.+
T Consensus 142 ~~-~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~------------~~~~~~~~-~------~~~~~~~~~~~~ 200 (372)
T 1k8k_C 142 RS-TVLSLDWHP-NSVLLAAGSCDFKCRIFSAYIKEVEER------------PAPTPWGS-K------MPFGELMFESSS 200 (372)
T ss_dssp CS-CEEEEEECT-TSSEEEEEETTSCEEEEECCCTTTSCC------------CCCBTTBS-C------CCTTCEEEECCC
T ss_pred CC-CeeEEEEcC-CCCEEEEEcCCCCEEEEEccccccccc------------cccccccc-c------cchhhheEecCC
Confidence 88 999999999 567999999999999999821000000 00000000 0 123457888999
Q ss_pred cccceeeeeeCCCCC
Q psy6415 158 SSQPINSLDWSADKL 172 (174)
Q Consensus 158 h~~~V~~l~~spd~~ 172 (174)
|..+|.+++|+|+++
T Consensus 201 ~~~~v~~~~~~~~~~ 215 (372)
T 1k8k_C 201 SCGWVHGVCFSANGS 215 (372)
T ss_dssp CSSCEEEEEECSSSS
T ss_pred CCCeEEEEEECCCCC
Confidence 999999999999985
No 90
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.82 E-value=3.3e-19 Score=144.74 Aligned_cols=145 Identities=14% Similarity=0.195 Sum_probs=107.1
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+|++|+.||.|++||+++++...... +...|.+++|+|+ + .|++++.|+.|++||+++.+. ...+..|..
T Consensus 261 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~---~-~l~~~~~d~~i~i~d~~~~~~-----~~~~~~~~~ 331 (425)
T 1r5m_A 261 LLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGD---D-KVISCSMDGSVRLWSLKQNTL-----LALSIVDGV 331 (425)
T ss_dssp EEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETT---T-EEEEEETTSEEEEEETTTTEE-----EEEEECTTC
T ss_pred EEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCC---C-EEEEEeCCCcEEEEECCCCcE-----eEecccCCc
Confidence 47899999999999999888766553 6788999999995 3 899999999999999998653 334457888
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS 159 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~ 159 (174)
.|.+++|+| ++.+||+++.||.|++||+.+..... .. .+ ...++.. .....+++..+.+|.
T Consensus 332 -~i~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~---~~--~~----------~~~~~~~--~~~~~~~~~~~~~~~ 392 (425)
T 1r5m_A 332 -PIFAGRISQ-DGQKYAVAFMDGQVNVYDLKKLNSKS---RS--LY----------GNRDGIL--NPLPIPLYASYQSSQ 392 (425)
T ss_dssp -CEEEEEECT-TSSEEEEEETTSCEEEEECHHHHC-------------------------------CEECCEEEEECCTT
T ss_pred -cEEEEEEcC-CCCEEEEEECCCeEEEEECCCCccce---ee--ee----------ccccccc--CcccchhhhhhcCcc
Confidence 999999999 56799999999999999993210000 00 00 0001100 011124789999997
Q ss_pred c--ceeeeeeCCCCCC
Q psy6415 160 Q--PINSLDWSADKLG 173 (174)
Q Consensus 160 ~--~V~~l~~spd~~~ 173 (174)
. +|++++|+||++-
T Consensus 393 ~~~~v~~~~~s~~~~~ 408 (425)
T 1r5m_A 393 DNDYIFDLSWNCAGNK 408 (425)
T ss_dssp CCCCEEEEEECTTSSE
T ss_pred cCCceEEEEccCCCce
Confidence 7 9999999999863
No 91
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.82 E-value=4e-19 Score=155.93 Aligned_cols=126 Identities=17% Similarity=0.234 Sum_probs=98.9
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe----ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET----NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA 76 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~----~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~ 76 (174)
+|+||+.|++|+|||++........ .|...|.+++|+|++ ....|++++.|++|+|||+++.++ ..++.+
T Consensus 486 ~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~~l~s~s~d~~v~vwd~~~~~~-----~~~~~~ 559 (694)
T 3dm0_A 486 QIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT-LQPTIVSASWDKTVKVWNLSNCKL-----RSTLAG 559 (694)
T ss_dssp CEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS-SSCEEEEEETTSCEEEEETTTCCE-----EEEECC
T ss_pred EEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCC-CcceEEEEeCCCeEEEEECCCCcE-----EEEEcC
Confidence 4899999999999998765433221 356779999999964 235799999999999999998653 345578
Q ss_pred cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeee
Q psy6415 77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEAT 156 (174)
Q Consensus 77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~ 156 (174)
|.. .|++++|+| ++.+||||+.||+|+|||+. . ++.+.++.
T Consensus 560 h~~-~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~----------------------------~---------~~~~~~~~ 600 (694)
T 3dm0_A 560 HTG-YVSTVAVSP-DGSLCASGGKDGVVLLWDLA----------------------------E---------GKKLYSLE 600 (694)
T ss_dssp CSS-CEEEEEECT-TSSEEEEEETTSBCEEEETT----------------------------T---------TEEEECCB
T ss_pred CCC-CEEEEEEeC-CCCEEEEEeCCCeEEEEECC----------------------------C---------CceEEEec
Confidence 999 999999999 56799999999999999991 1 23455554
Q ss_pred ccccceeeeeeCCCCC
Q psy6415 157 LSSQPINSLDWSADKL 172 (174)
Q Consensus 157 ~h~~~V~~l~~spd~~ 172 (174)
. ...|++++|||++.
T Consensus 601 ~-~~~v~~~~~sp~~~ 615 (694)
T 3dm0_A 601 A-NSVIHALCFSPNRY 615 (694)
T ss_dssp C-SSCEEEEEECSSSS
T ss_pred C-CCcEEEEEEcCCCc
Confidence 4 45789999999875
No 92
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.81 E-value=1.1e-18 Score=144.53 Aligned_cols=142 Identities=13% Similarity=0.123 Sum_probs=95.4
Q ss_pred cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEE--cCCCcE
Q psy6415 27 LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTC--GGSGSL 104 (174)
Q Consensus 27 ~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~--s~Dg~V 104 (174)
|...++.+.|+|++ +.+++++.|+.|+|||+++.+.... .......|.. .|.+++|+|.+..+++++ +.|++|
T Consensus 229 h~~~~~~~~~~~~g---~~l~s~~~D~~v~i~~~~~~~~~~~-~~~~~~~~~~-~V~~~~~~p~~~~~la~~~gs~D~~I 303 (420)
T 4gga_A 229 HSQEVCGLRWAPDG---RHLASGGNDNLVNVWPSAPGEGGWV-PLQTFTQHQG-AVKAVAWCPWQSNVLATGGGTSDRHI 303 (420)
T ss_dssp CSSCEEEEEECTTS---SEEEEEETTSCEEEEESSCCSSCSC-CSEEECCCSS-CEEEEEECTTCTTEEEEEECTTTCEE
T ss_pred cccceeeeeecCCC---CeeeeeeccccceEEeeccccccce-eeeeecccCC-ceeeeeeCCCcccEEEEEeecCCCEE
Confidence 55678899999974 8999999999999999987653321 2334567888 999999999988888764 579999
Q ss_pred EEEeccccccccccccceeeeecCC-CCCCccc----CCCCCcccc--ccccceeeeeeccccceeeeeeCCCCCCC
Q psy6415 105 NLWQLVSALRADTNLCSIFRYSSNY-PTQRTKP----DIDDIPMGV--PGSLTLLQEATLSSQPINSLDWSADKLGL 174 (174)
Q Consensus 105 ~lWd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~dg~~~~~--~~~~~ll~~~~~h~~~V~~l~~spd~~~~ 174 (174)
++||+.+.............+...+ |....+. ..||. +.+ ..+++++.++.||+.+|++|+|||||+-|
T Consensus 304 ~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~-I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l 379 (420)
T 4gga_A 304 RIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQ-LVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATV 379 (420)
T ss_dssp EEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCC-EEEEETTTCCEEEEECCCSSCEEEEEECTTSSCE
T ss_pred EEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCE-EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEE
Confidence 9999944111000000001111111 2222221 12332 111 35567899999999999999999998743
No 93
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.81 E-value=7.7e-19 Score=140.05 Aligned_cols=162 Identities=9% Similarity=0.073 Sum_probs=113.1
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+||+|+.||.|++||+.+++...... |...|.+++|+|++ +.|++++.|++|++||+++.++.. .+ .|..
T Consensus 46 ~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~~~~~-----~~-~~~~ 116 (369)
T 3zwl_B 46 LLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFT---KYCVTGSADYSIKLWDVSNGQCVA-----TW-KSPV 116 (369)
T ss_dssp EEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS---SEEEEEETTTEEEEEETTTCCEEE-----EE-ECSS
T ss_pred EEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCC---CEEEEEeCCCeEEEEECCCCcEEE-----Ee-ecCC
Confidence 48999999999999999998876654 77889999999964 899999999999999999876432 23 3667
Q ss_pred CcEEEEEEcCCCCCEEEEEcCC-----CcEEEEeccccccccc------cccce--------eeeecCC-CCCCccc--C
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGS-----GSLNLWQLVSALRADT------NLCSI--------FRYSSNY-PTQRTKP--D 137 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~D-----g~V~lWd~~~~~~~~~------~~~~~--------~~~~~~~-~~~~~~~--~ 137 (174)
.|.+++|+| ++..|++++.+ |.|++||++....... ..... ......+ |++..++ .
T Consensus 117 -~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (369)
T 3zwl_B 117 -PVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH 194 (369)
T ss_dssp -CEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE
T ss_pred -CeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc
Confidence 899999999 56788999998 9999999944111000 00000 0011111 2222111 1
Q ss_pred CCCCcc-ccccc-cceeeeeeccccceeeeeeCCCCCC
Q psy6415 138 IDDIPM-GVPGS-LTLLQEATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 138 ~dg~~~-~~~~~-~~ll~~~~~h~~~V~~l~~spd~~~ 173 (174)
.||... ....+ .+.+..+.+|..+|.+++|+||++-
T Consensus 195 ~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 232 (369)
T 3zwl_B 195 KDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTY 232 (369)
T ss_dssp TTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSE
T ss_pred CCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCE
Confidence 333111 01222 4678899999999999999999863
No 94
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.81 E-value=2.1e-18 Score=135.58 Aligned_cols=102 Identities=13% Similarity=0.225 Sum_probs=81.4
Q ss_pred EEEEecCCcEEEEECCCCCeEEEee---cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccce---------
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETN---LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGF--------- 69 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~---~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~--------- 69 (174)
||+| .|++|+|||+.++++..... |...|++|+|+|++ +.||+|+.|++|+|||+++.++...+
T Consensus 39 lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~---~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~ 114 (318)
T 4ggc_A 39 LAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG---NYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGS 114 (318)
T ss_dssp EEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS---SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred EEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCC---CEEEEEECCCcEEEeecCCceeEEEecCccceEEE
Confidence 5555 58999999999999876543 45679999999974 89999999999999999986532211
Q ss_pred ---------------------------eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 70 ---------------------------AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 70 ---------------------------~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
....+.+|.. .+..++|+| ++.+|++++.||+|++||+
T Consensus 115 ~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~l~s~~~d~~i~iwd~ 179 (318)
T 4ggc_A 115 LSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ-EVCGLRWAP-DGRHLASGGNDNLVNVWPS 179 (318)
T ss_dssp EEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS-CEEEEEECT-TSSEEEEEETTSCEEEEES
T ss_pred eecCCCEEEEEecCCceEeeecCCCceeEEEEcCccC-ceEEEEEcC-CCCEEEEEecCcceeEEEC
Confidence 1123446777 889999999 4578999999999999999
No 95
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.81 E-value=3.5e-19 Score=157.11 Aligned_cols=125 Identities=14% Similarity=0.217 Sum_probs=105.8
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+||+|+.||+|+|||++++....... |...|.+++|+|++ +.|++++.|+.|+|||+++.+. ...+.+|..
T Consensus 27 ~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~dg~i~vw~~~~~~~-----~~~~~~~~~ 98 (814)
T 3mkq_A 27 WVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARK---NWIIVGSDDFRIRVFNYNTGEK-----VVDFEAHPD 98 (814)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGG---TEEEEEETTSEEEEEETTTCCE-----EEEEECCSS
T ss_pred EEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCC---CEEEEEeCCCeEEEEECCCCcE-----EEEEecCCC
Confidence 48999999999999999998776654 67889999999974 8999999999999999998654 334568998
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS 159 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~ 159 (174)
.|++++|+|+ +..|++|+.||+|++||++ .+ ..+...+.+|.
T Consensus 99 -~v~~~~~s~~-~~~l~~~~~dg~i~vw~~~----------------------------~~--------~~~~~~~~~~~ 140 (814)
T 3mkq_A 99 -YIRSIAVHPT-KPYVLSGSDDLTVKLWNWE----------------------------NN--------WALEQTFEGHE 140 (814)
T ss_dssp -CEEEEEECSS-SSEEEEEETTSEEEEEEGG----------------------------GT--------SEEEEEEECCS
T ss_pred -CEEEEEEeCC-CCEEEEEcCCCEEEEEECC----------------------------CC--------ceEEEEEcCCC
Confidence 9999999994 5689999999999999991 11 13577888999
Q ss_pred cceeeeeeCC-CC
Q psy6415 160 QPINSLDWSA-DK 171 (174)
Q Consensus 160 ~~V~~l~~sp-d~ 171 (174)
.+|.+++|+| ++
T Consensus 141 ~~v~~~~~~p~~~ 153 (814)
T 3mkq_A 141 HFVMCVAFNPKDP 153 (814)
T ss_dssp SCEEEEEEETTEE
T ss_pred CcEEEEEEEcCCC
Confidence 9999999999 55
No 96
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.80 E-value=4.1e-19 Score=145.43 Aligned_cols=99 Identities=17% Similarity=0.224 Sum_probs=82.2
Q ss_pred EEEEecCC----cEEEEECCCCCeEE-----EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee
Q psy6415 2 VVAGYDNG----DLKMFDLKTMSLKW-----ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL 72 (174)
Q Consensus 2 lasgs~Dg----~iklWDl~~~~~~~-----~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~ 72 (174)
|++++.|+ ++++||++...... ...+...|++++|+|++ ++||+|+.|++|+|||+++.+++..
T Consensus 234 l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg---~~lasgs~D~~V~iwd~~~~~~~~~---- 306 (365)
T 4h5i_A 234 LIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKG---ELAVLASNDNSIALVKLKDLSMSKI---- 306 (365)
T ss_dssp EEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTS---CEEEEEETTSCEEEEETTTTEEEEE----
T ss_pred EEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCC---CceEEEcCCCEEEEEECCCCcEEEE----
Confidence 67888887 68899987765422 23456789999999974 8999999999999999998764322
Q ss_pred eecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 73 SEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 73 ~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+.+|.. .|++|+||| ++.+|||||.|++|+|||+
T Consensus 307 ~~~gH~~-~V~~v~fSp-dg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 307 FKQAHSF-AITEVTISP-DSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp ETTSSSS-CEEEEEECT-TSCEEEEEETTSEEEEEEC
T ss_pred ecCcccC-CEEEEEECC-CCCEEEEEeCCCeEEEEEc
Confidence 2368999 999999999 5679999999999999999
No 97
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.80 E-value=1.1e-18 Score=137.26 Aligned_cols=128 Identities=13% Similarity=0.110 Sum_probs=97.7
Q ss_pred CEEEEecCCcEEEEECCCCCeE-----EEeecCCCEEEEEecCCCCCCCEE--EEEeCCCcEEEEECCCcccccceeeee
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLK-----WETNLKNGVCGVDFDRRDIPMNKL--VATTLEAKLFVFDLKTLHREKGFAYLS 73 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~-----~~~~~~~~V~sv~f~~~~~~~~~l--~s~s~Dg~I~iWD~~~~~~~~~~~~~~ 73 (174)
+|++|+.||+|++||+++++.. ....+...|.+++++|.+ .+.+ ++++.+++|+|||.+......
T Consensus 164 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~i~lwd~~~~~~~~------ 235 (318)
T 4ggc_A 164 HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQ--SNVLATGGGTSDRHIRIWNVCSGACLS------ 235 (318)
T ss_dssp EEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTS--TTEEEEEECTTTCEEEEEETTTCCEEE------
T ss_pred EEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCC--CcEEEEEecCCCCEEEEEecccccccc------
Confidence 3789999999999999887532 223456789999999975 3444 467899999999998865321
Q ss_pred ecccCcCcEEEEEEcCCCCCEEE-EEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccccccccee
Q psy6415 74 EKAHKATTVWAAKHLPQNRDLFV-TCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLL 152 (174)
Q Consensus 74 ~~~h~~~~i~~v~fsP~~~~~la-s~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll 152 (174)
...+.. .+..+.|+|.+..+++ +|+.||+|+|||++ . ++++
T Consensus 236 ~~~~~~-~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~----------------------------~---------~~~~ 277 (318)
T 4ggc_A 236 AVDAHS-QVCSILWSPHYKELISGHGFAQNQLVIWKYP----------------------------T---------MAKV 277 (318)
T ss_dssp EEECSS-CEEEEEEETTTTEEEEEECTTTCCEEEEETT----------------------------T---------CCEE
T ss_pred ccccee-eeeeeeecccccceEEEEEcCCCEEEEEECC----------------------------C---------CcEE
Confidence 124556 8999999997654433 34589999999991 2 3578
Q ss_pred eeeeccccceeeeeeCCCCCCC
Q psy6415 153 QEATLSSQPINSLDWSADKLGL 174 (174)
Q Consensus 153 ~~~~~h~~~V~~l~~spd~~~~ 174 (174)
.++.+|+.+|++|+||||++-|
T Consensus 278 ~~l~gH~~~V~~l~~spdg~~l 299 (318)
T 4ggc_A 278 AELKGHTSRVLSLTMSPDGATV 299 (318)
T ss_dssp EEECCCSSCEEEEEECTTSSCE
T ss_pred EEEcCCCCCEEEEEEcCCCCEE
Confidence 9999999999999999998743
No 98
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.80 E-value=6.3e-19 Score=140.12 Aligned_cols=97 Identities=10% Similarity=0.163 Sum_probs=84.1
Q ss_pred CEEEEecCCcEEEEECCCCC----eEEEeecCCCEEEEEecCCCCCCC-EEEEEeCCCcEEEEEC-CCcccccceeeeee
Q psy6415 1 MVVAGYDNGDLKMFDLKTMS----LKWETNLKNGVCGVDFDRRDIPMN-KLVATTLEAKLFVFDL-KTLHREKGFAYLSE 74 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~----~~~~~~~~~~V~sv~f~~~~~~~~-~l~s~s~Dg~I~iWD~-~~~~~~~~~~~~~~ 74 (174)
+|++|+.||+|+|||++++. ......|...|.+++|+|++ + .|++|+.|+.|++||+ ++.+. ..+
T Consensus 25 ~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~dg~i~~wd~~~~~~~------~~~ 95 (342)
T 1yfq_A 25 LLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNT---DLQIYVGTVQGEILKVDLIGSPSF------QAL 95 (342)
T ss_dssp EEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESS---SEEEEEEETTSCEEEECSSSSSSE------EEC
T ss_pred EEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCC---CcEEEEEcCCCeEEEEEeccCCce------Eec
Confidence 47999999999999998887 55556678899999999974 8 8999999999999999 77542 344
Q ss_pred cc--cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 75 KA--HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 75 ~~--h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+ |.. .|++++|+| +..|++++.||+|++||+
T Consensus 96 ~~~~~~~-~v~~l~~~~--~~~l~s~~~d~~i~iwd~ 129 (342)
T 1yfq_A 96 TNNEANL-GICRICKYG--DDKLIAASWDGLIEVIDP 129 (342)
T ss_dssp BSCCCCS-CEEEEEEET--TTEEEEEETTSEEEEECH
T ss_pred cccCCCC-ceEEEEeCC--CCEEEEEcCCCeEEEEcc
Confidence 57 988 999999999 568999999999999999
No 99
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.80 E-value=2e-18 Score=137.67 Aligned_cols=125 Identities=14% Similarity=0.232 Sum_probs=101.6
Q ss_pred CEEEEecCCcEEEEECCC-CCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415 1 MVVAGYDNGDLKMFDLKT-MSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK 78 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~-~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~ 78 (174)
+|++|+.||.|++||+++ +...... .+...|.+++|+|++ +.|++++.|+.|++||+++.+... .+ .+.
T Consensus 189 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~v~d~~~~~~~~-----~~-~~~ 259 (369)
T 3zwl_B 189 YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDL---TYFITSSRDTNSFLVDVSTLQVLK-----KY-ETD 259 (369)
T ss_dssp EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTCCEEE-----EE-ECS
T ss_pred EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCC---CEEEEecCCceEEEEECCCCceee-----ee-cCC
Confidence 378999999999999998 5555444 467889999999974 899999999999999999876432 22 356
Q ss_pred cCcEEEEEEcCCCCCEEEEEcCCC--------------cEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccc
Q psy6415 79 ATTVWAAKHLPQNRDLFVTCGGSG--------------SLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMG 144 (174)
Q Consensus 79 ~~~i~~v~fsP~~~~~las~s~Dg--------------~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~ 144 (174)
. .+.+++|+|+ +..+++++.++ .|++||+
T Consensus 260 ~-~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~----------------------------------- 302 (369)
T 3zwl_B 260 C-PLNTAVITPL-KEFIILGGGQEAKDVTTTSANEGKFEARFYHK----------------------------------- 302 (369)
T ss_dssp S-CEEEEEECSS-SSEEEEEECCC-------------CEEEEEET-----------------------------------
T ss_pred C-CceeEEecCC-CceEEEeecCCCceEEEEecCCCcceeEEEec-----------------------------------
Confidence 6 8999999995 56888899888 6777777
Q ss_pred cccccceeeeeeccccceeeeeeCCCCCC
Q psy6415 145 VPGSLTLLQEATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 145 ~~~~~~ll~~~~~h~~~V~~l~~spd~~~ 173 (174)
.+.+.+..+.+|..+|++++|+||++-
T Consensus 303 --~~~~~~~~~~~~~~~v~~~~~s~~~~~ 329 (369)
T 3zwl_B 303 --IFEEEIGRVQGHFGPLNTVAISPQGTS 329 (369)
T ss_dssp --TTCCEEEEEECCSSCEEEEEECTTSSE
T ss_pred --CCCcchhheecccCcEEEEEECCCCCE
Confidence 123467888999999999999999864
No 100
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.80 E-value=2.2e-18 Score=152.02 Aligned_cols=161 Identities=9% Similarity=0.099 Sum_probs=115.7
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+||+|+.||.|++||+++++...... |...|.+++|+|++ +.|++++.|++|++||+++... ....+.+|..
T Consensus 69 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~dg~i~vw~~~~~~~----~~~~~~~~~~ 141 (814)
T 3mkq_A 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK---PYVLSGSDDLTVKLWNWENNWA----LEQTFEGHEH 141 (814)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS---SEEEEEETTSEEEEEEGGGTSE----EEEEEECCSS
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCC---CEEEEEcCCCEEEEEECCCCce----EEEEEcCCCC
Confidence 38999999999999999998876654 77889999999974 8999999999999999987521 2334568888
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccccc---ccc-cceeeeecCC-C--CCCcc--cCCCCCcccc--ccc
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRAD---TNL-CSIFRYSSNY-P--TQRTK--PDIDDIPMGV--PGS 148 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~---~~~-~~~~~~~~~~-~--~~~~~--~~~dg~~~~~--~~~ 148 (174)
.|.+++|+|.++..|++++.||+|++||+.+..... ... ..+ ....+ | ++..+ ...||. +.+ ..+
T Consensus 142 -~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~l~~~~~dg~-i~~~d~~~ 217 (814)
T 3mkq_A 142 -FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGV--NYVDYYPLPDKPYMITASDDLT-IKIWDYQT 217 (814)
T ss_dssp -CEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCC--CEEEECCSTTCCEEEEECTTSE-EEEEETTT
T ss_pred -cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCE--EEEEEEECCCCCEEEEEeCCCE-EEEEECCC
Confidence 999999999667799999999999999994311100 000 000 01111 1 22222 112331 111 244
Q ss_pred cceeeeeeccccceeeeeeCCCCC
Q psy6415 149 LTLLQEATLSSQPINSLDWSADKL 172 (174)
Q Consensus 149 ~~ll~~~~~h~~~V~~l~~spd~~ 172 (174)
.+.+.++.+|..+|.+++|+|+++
T Consensus 218 ~~~~~~~~~~~~~v~~~~~~~~~~ 241 (814)
T 3mkq_A 218 KSCVATLEGHMSNVSFAVFHPTLP 241 (814)
T ss_dssp TEEEEEEECCSSCEEEEEECSSSS
T ss_pred CcEEEEEcCCCCCEEEEEEcCCCC
Confidence 567888999999999999999985
No 101
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.80 E-value=2.9e-18 Score=141.97 Aligned_cols=122 Identities=14% Similarity=0.167 Sum_probs=100.2
Q ss_pred EEEEecCCcEEEEECCCCCeEEEee---cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETN---LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK 78 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~---~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~ 78 (174)
||+| .|++|+|||+.++++..... |...|++|+|+|++ ++||+|+.|++|+|||+++.++ +..+.+|.
T Consensus 119 lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg---~~lasgs~Dg~v~iWd~~~~~~-----~~~~~~h~ 189 (420)
T 4gga_A 119 LAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG---NYLAVGTSSAEVQLWDVQQQKR-----LRNMTSHS 189 (420)
T ss_dssp EEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEE-----EEEECCCS
T ss_pred EEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCC---CEEEEEECCCeEEEEEcCCCcE-----EEEEeCCC
Confidence 5555 58999999999998876543 45679999999974 8999999999999999998654 34556899
Q ss_pred cCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecc
Q psy6415 79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLS 158 (174)
Q Consensus 79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h 158 (174)
. .+.++++++ .+|++|+.|++|++||... ....+.++.+|
T Consensus 190 ~-~v~~~s~~~---~~l~sgs~d~~i~~~d~~~------------------------------------~~~~~~~~~~h 229 (420)
T 4gga_A 190 A-RVGSLSWNS---YILSSGSRSGHIHHHDVRV------------------------------------AEHHVATLSGH 229 (420)
T ss_dssp S-CEEEEEEET---TEEEEEETTSEEEEEETTS------------------------------------SSCEEEEEECC
T ss_pred C-ceEEEeeCC---CEEEEEeCCCceeEeeecc------------------------------------cceeeEEeccc
Confidence 9 999998875 5899999999999999910 01356778899
Q ss_pred ccceeeeeeCCCCC
Q psy6415 159 SQPINSLDWSADKL 172 (174)
Q Consensus 159 ~~~V~~l~~spd~~ 172 (174)
...|..+.|+|+++
T Consensus 230 ~~~~~~~~~~~~g~ 243 (420)
T 4gga_A 230 SQEVCGLRWAPDGR 243 (420)
T ss_dssp SSCEEEEEECTTSS
T ss_pred ccceeeeeecCCCC
Confidence 99999999999875
No 102
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.80 E-value=1.4e-18 Score=140.97 Aligned_cols=124 Identities=16% Similarity=0.242 Sum_probs=105.4
Q ss_pred EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
+++|+.||.|++||+++++..... .+...|.+++|+|++ +.|++++.|+.|++||+++.+.. ..+..|..
T Consensus 220 ~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~-----~~~~~~~~- 290 (425)
T 1r5m_A 220 FVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTN---KLLLSASDDGTLRIWHGGNGNSQ-----NCFYGHSQ- 290 (425)
T ss_dssp EEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTT---TEEEEEETTSCEEEECSSSBSCS-----EEECCCSS-
T ss_pred EEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCC---CEEEEEcCCCEEEEEECCCCccc-----eEecCCCc-
Confidence 688999999999999998776554 467889999999974 79999999999999999986543 34457888
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ 160 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~ 160 (174)
.|.+++|+|+ + +|++++.||.|++||+ . +++++..+.+|..
T Consensus 291 ~i~~~~~~~~-~-~l~~~~~d~~i~i~d~-----------------------------~--------~~~~~~~~~~~~~ 331 (425)
T 1r5m_A 291 SIVSASWVGD-D-KVISCSMDGSVRLWSL-----------------------------K--------QNTLLALSIVDGV 331 (425)
T ss_dssp CEEEEEEETT-T-EEEEEETTSEEEEEET-----------------------------T--------TTEEEEEEECTTC
T ss_pred cEEEEEECCC-C-EEEEEeCCCcEEEEEC-----------------------------C--------CCcEeEecccCCc
Confidence 9999999995 4 8999999999999999 1 1246788889999
Q ss_pred ceeeeeeCCCCCC
Q psy6415 161 PINSLDWSADKLG 173 (174)
Q Consensus 161 ~V~~l~~spd~~~ 173 (174)
+|.+++|+||++-
T Consensus 332 ~i~~~~~s~~~~~ 344 (425)
T 1r5m_A 332 PIFAGRISQDGQK 344 (425)
T ss_dssp CEEEEEECTTSSE
T ss_pred cEEEEEEcCCCCE
Confidence 9999999999863
No 103
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.80 E-value=6.7e-19 Score=145.37 Aligned_cols=131 Identities=12% Similarity=0.144 Sum_probs=97.2
Q ss_pred CEEEEecCCcEEEEECCC---CC---eEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECC---Cccccccee-
Q psy6415 1 MVVAGYDNGDLKMFDLKT---MS---LKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK---TLHREKGFA- 70 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~---~~---~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~---~~~~~~~~~- 70 (174)
+||+|+.||+|+|||+++ +. ......|...|.+|+|+|++ +.|++|+.|++|+|||++ +.+......
T Consensus 78 ~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 154 (437)
T 3gre_A 78 YLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNF---DAFAVSSKDGQIIVLKVNHYQQESEVKFLNC 154 (437)
T ss_dssp EEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTS---SEEEEEETTSEEEEEEEEEEEETTEEEEEEE
T ss_pred EEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCC---CEEEEEeCCCEEEEEEeccccCCceeecccc
Confidence 489999999999999976 43 23444678899999999964 899999999999999995 332211111
Q ss_pred --eeee--cc--cCcCcEEEEE--EcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCc
Q psy6415 71 --YLSE--KA--HKATTVWAAK--HLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIP 142 (174)
Q Consensus 71 --~~~~--~~--h~~~~i~~v~--fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~ 142 (174)
+..+ .. +.. .+.++. ++| ++.+|++|+.||+|++||++ .
T Consensus 155 ~~i~~~~~~~~~~~~-~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~----------------------------~--- 201 (437)
T 3gre_A 155 ECIRKINLKNFGKNE-YAVRMRAFVNE-EKSLLVALTNLSRVIIFDIR----------------------------T--- 201 (437)
T ss_dssp EEEEEEEGGGGSSCC-CEEEEEEEECS-SCEEEEEEETTSEEEEEETT----------------------------T---
T ss_pred ceeEEEEccCccccc-CceEEEEEEcC-CCCEEEEEeCCCeEEEEeCC----------------------------C---
Confidence 1111 11 444 666666 556 56799999999999999991 1
Q ss_pred cccccccceeeeeec--cccceeeeeeCCCCCC
Q psy6415 143 MGVPGSLTLLQEATL--SSQPINSLDWSADKLG 173 (174)
Q Consensus 143 ~~~~~~~~ll~~~~~--h~~~V~~l~~spd~~~ 173 (174)
.+.+.++.+ |..+|++++|+|+++-
T Consensus 202 ------~~~~~~~~~~~h~~~v~~~~~s~~~~~ 228 (437)
T 3gre_A 202 ------LERLQIIENSPRHGAVSSICIDEECCV 228 (437)
T ss_dssp ------CCEEEEEECCGGGCCEEEEEECTTSCE
T ss_pred ------CeeeEEEccCCCCCceEEEEECCCCCE
Confidence 246777887 8999999999999753
No 104
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.79 E-value=7.1e-19 Score=144.78 Aligned_cols=138 Identities=9% Similarity=0.202 Sum_probs=96.4
Q ss_pred CEEEEecCCcEEEEECCCCC-----------eEEE-eecC------------CCEEEEEecCCCCCCCEEEEEeCCCcEE
Q psy6415 1 MVVAGYDNGDLKMFDLKTMS-----------LKWE-TNLK------------NGVCGVDFDRRDIPMNKLVATTLEAKLF 56 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~-----------~~~~-~~~~------------~~V~sv~f~~~~~~~~~l~s~s~Dg~I~ 56 (174)
+||+|+.||.|+|||+.++. +... ..|. ..|++|+|+|++ +...|++++.|++|+
T Consensus 42 ~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~-~~~~l~s~s~d~~i~ 120 (447)
T 3dw8_B 42 LLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK-NAAQFLLSTNDKTIK 120 (447)
T ss_dssp EEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC-SSSEEEEEECSSCEE
T ss_pred EEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC-CcceEEEeCCCCeEE
Confidence 48999999999999998776 2323 3455 779999999963 125899999999999
Q ss_pred EEECCCcccccc-------------------e---------------ee-eeecccCcCcEEEEEEcCCCCCEEEEEcCC
Q psy6415 57 VFDLKTLHREKG-------------------F---------------AY-LSEKAHKATTVWAAKHLPQNRDLFVTCGGS 101 (174)
Q Consensus 57 iWD~~~~~~~~~-------------------~---------------~~-~~~~~h~~~~i~~v~fsP~~~~~las~s~D 101 (174)
|||+++...... + .. ....+|.. .|++++|+| ++.+||+| .|
T Consensus 121 iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~-~~~~l~s~-~d 197 (447)
T 3dw8_B 121 LWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY-HINSISINS-DYETYLSA-DD 197 (447)
T ss_dssp EEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS-CCCEEEECT-TSSEEEEE-CS
T ss_pred EEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc-ceEEEEEcC-CCCEEEEe-CC
Confidence 999986432100 0 00 11257888 999999999 56789998 79
Q ss_pred CcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCC
Q psy6415 102 GSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADK 171 (174)
Q Consensus 102 g~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~ 171 (174)
|+|++||+++ .. ..+.... ....++.+|..+|++++|+|++
T Consensus 198 ~~i~iwd~~~----~~---~~~~~~~----------------------~~~~~~~~~~~~v~~~~~~p~~ 238 (447)
T 3dw8_B 198 LRINLWHLEI----TD---RSFNIVD----------------------IKPANMEELTEVITAAEFHPNS 238 (447)
T ss_dssp SEEEEEETTE----EE---EEEEEEE----------------------CCCSSGGGCCCCEEEEEECSSC
T ss_pred CeEEEEECCC----CC---ceeeeee----------------------cccccccccCcceEEEEECCCC
Confidence 9999999911 00 0000000 0012567999999999999997
No 105
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.79 E-value=1.4e-18 Score=145.06 Aligned_cols=129 Identities=8% Similarity=0.120 Sum_probs=102.9
Q ss_pred EEEEecCCcEEEEECC--CCCeEEEe---ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415 2 VVAGYDNGDLKMFDLK--TMSLKWET---NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA 76 (174)
Q Consensus 2 lasgs~Dg~iklWDl~--~~~~~~~~---~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~ 76 (174)
+|+|+.||+|+|||++ ++.+.... .+...|++++|+|++ +.|++|+.|+.|++||+.+...... ....+.+
T Consensus 118 ~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~---~~l~~~~~~g~v~~~~~~~~~~~~~-~~~~~~~ 193 (450)
T 2vdu_B 118 IACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD---TTVIIADKFGDVYSIDINSIPEEKF-TQEPILG 193 (450)
T ss_dssp EEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS---SEEEEEETTSEEEEEETTSCCCSSC-CCCCSEE
T ss_pred EEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC---CEEEEEeCCCcEEEEecCCcccccc-cceeeec
Confidence 4899999999999998 77766554 456889999999974 8999999999999999987654320 1224458
Q ss_pred cCcCcEEEEEEcCC--CCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeee
Q psy6415 77 HKATTVWAAKHLPQ--NRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQE 154 (174)
Q Consensus 77 h~~~~i~~v~fsP~--~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~ 154 (174)
|.. .|++++|+|+ ++.+|++|+.|++|++||+. . ++.+..
T Consensus 194 h~~-~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~----------------------------~---------~~~~~~ 235 (450)
T 2vdu_B 194 HVS-MLTDVHLIKDSDGHQFIITSDRDEHIKISHYP----------------------------Q---------CFIVDK 235 (450)
T ss_dssp CSS-CEEEEEEEECTTSCEEEEEEETTSCEEEEEES----------------------------C---------TTCEEE
T ss_pred ccC-ceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC----------------------------C---------Cceeee
Confidence 888 9999999994 16689999999999999991 1 124444
Q ss_pred -eeccccceeeeeeCCCCCC
Q psy6415 155 -ATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 155 -~~~h~~~V~~l~~spd~~~ 173 (174)
+.+|..+|++++|| |++-
T Consensus 236 ~~~~h~~~v~~~~~s-d~~~ 254 (450)
T 2vdu_B 236 WLFGHKHFVSSICCG-KDYL 254 (450)
T ss_dssp ECCCCSSCEEEEEEC-STTE
T ss_pred eecCCCCceEEEEEC-CCCE
Confidence 56899999999999 8753
No 106
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.79 E-value=1.3e-18 Score=154.91 Aligned_cols=132 Identities=17% Similarity=0.210 Sum_probs=105.6
Q ss_pred CEEEEecCCcEEEEECCCCC--eEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMS--LKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH 77 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~--~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h 77 (174)
+|++|+.||+|++||++++. .... ..|...|.+++|+|+. .++.|++|+.||+|++||+++..... ...+.+|
T Consensus 69 ~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~-~~~~l~sgs~dg~I~vwdl~~~~~~~---~~~~~~~ 144 (753)
T 3jro_A 69 ILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHE-YGPLLLVASSDGKVSVVEFKENGTTS---PIIIDAH 144 (753)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGG-GCSEEEEEETTSEEEEEECCSSSCCC---CEEEECC
T ss_pred EEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCC-CCCEEEEEeCCCcEEEEEeecCCCcc---eeEeecC
Confidence 38999999999999999886 3333 3467889999999961 13899999999999999999864332 2244588
Q ss_pred CcCcEEEEEEcCC------------CCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccc
Q psy6415 78 KATTVWAAKHLPQ------------NRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGV 145 (174)
Q Consensus 78 ~~~~i~~v~fsP~------------~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~ 145 (174)
.. .|.+++|+|. ++.+|++|+.||+|++||+. .+.
T Consensus 145 ~~-~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~----------------------------~~~---- 191 (753)
T 3jro_A 145 AI-GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN----------------------------SDA---- 191 (753)
T ss_dssp SS-CEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEE----------------------------TTT----
T ss_pred CC-ceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEecc----------------------------CCc----
Confidence 88 9999999995 46789999999999999991 110
Q ss_pred ccccceeeeeeccccceeeeeeCCC
Q psy6415 146 PGSLTLLQEATLSSQPINSLDWSAD 170 (174)
Q Consensus 146 ~~~~~ll~~~~~h~~~V~~l~~spd 170 (174)
...+++.++.+|..+|++++|+|+
T Consensus 192 -~~~~~~~~~~~h~~~V~~l~~sp~ 215 (753)
T 3jro_A 192 -QTYVLESTLEGHSDWVRDVAWSPT 215 (753)
T ss_dssp -TEEEEEEEECCCSSCEEEEEECCC
T ss_pred -ccceeeeeecCCCCcEEEEEeccC
Confidence 122467888999999999999999
No 107
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.79 E-value=1.6e-18 Score=140.70 Aligned_cols=130 Identities=17% Similarity=0.143 Sum_probs=99.9
Q ss_pred CEEEEecCCcEEEEECCCCCe-----EEEe-ec-----CCCEEEEEec----CCCCCCCE-EEEEeCCCcEEEEECCC--
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSL-----KWET-NL-----KNGVCGVDFD----RRDIPMNK-LVATTLEAKLFVFDLKT-- 62 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~-----~~~~-~~-----~~~V~sv~f~----~~~~~~~~-l~s~s~Dg~I~iWD~~~-- 62 (174)
+|++|+.||+|++||+++++. .... .+ ...|.+++|+ |++ +. |++++.|+.|++||+++
T Consensus 83 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~ 159 (397)
T 1sq9_A 83 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL---SHRLVATDVKGTTYIWKFHPFA 159 (397)
T ss_dssp EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-------CEEEEEEETTSCEEEEEEESSS
T ss_pred EEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCC---ceEEEEEeCCCcEEEEeCCccc
Confidence 479999999999999988874 4443 34 3889999999 864 88 99999999999999998
Q ss_pred ----cccccceeeeee-------cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCC
Q psy6415 63 ----LHREKGFAYLSE-------KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPT 131 (174)
Q Consensus 63 ----~~~~~~~~~~~~-------~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~ 131 (174)
.+...-.....+ ..|.. .|++++|+|+ + +|++++.||.|++||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~-~-~l~~~~~dg~i~i~d~~--------------------- 215 (397)
T 1sq9_A 160 DESNSLTLNWSPTLELQGTVESPMTPSQ-FATSVDISER-G-LIATGFNNGTVQISELS--------------------- 215 (397)
T ss_dssp SHHHHTTTCCCCEEEEEEEECCSSSSCC-CCCEEEECTT-S-EEEEECTTSEEEEEETT---------------------
T ss_pred cccccceeeccCcceeeeeeccccCCCC-CceEEEECCC-c-eEEEEeCCCcEEEEECC---------------------
Confidence 554331011123 34777 9999999995 5 99999999999999991
Q ss_pred CCcccCCCCCccccccccceeeeeec---c---ccceeeeeeCCCCCC
Q psy6415 132 QRTKPDIDDIPMGVPGSLTLLQEATL---S---SQPINSLDWSADKLG 173 (174)
Q Consensus 132 ~~~~~~~dg~~~~~~~~~~ll~~~~~---h---~~~V~~l~~spd~~~ 173 (174)
. .+.+..+.+ | ..+|.+++|+|+++-
T Consensus 216 -------~---------~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~ 247 (397)
T 1sq9_A 216 -------T---------LRPLYNFESQHSMINNSNSIRSVKFSPQGSL 247 (397)
T ss_dssp -------T---------TEEEEEEECCC---CCCCCEEEEEECSSTTE
T ss_pred -------C---------CceeEEEeccccccccCCccceEEECCCCCE
Confidence 1 246777778 9 999999999999863
No 108
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.79 E-value=2e-18 Score=137.50 Aligned_cols=130 Identities=13% Similarity=0.188 Sum_probs=97.5
Q ss_pred CEEEEecCCcEEEEECCCCC-eEEEee-c----CCCEEEEE----ecCCCCCCCEEEEEeCCCcEEEEECCCccccccee
Q psy6415 1 MVVAGYDNGDLKMFDLKTMS-LKWETN-L----KNGVCGVD----FDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFA 70 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~-~~~~~~-~----~~~V~sv~----f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~ 70 (174)
+|++|+.||+|++||++++. ...... + ...|.+++ |+|+ ++.|++++.|+.|++||+++.+..
T Consensus 131 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~~---- 203 (357)
T 3i2n_A 131 EIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQE---ERVVCAGYDNGDIKLFDLRNMALR---- 203 (357)
T ss_dssp EEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-C---CCEEEEEETTSEEEEEETTTTEEE----
T ss_pred EEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCC---CCEEEEEccCCeEEEEECccCcee----
Confidence 37999999999999999876 444332 2 23789998 6775 489999999999999999986532
Q ss_pred eeeecccCcCcEEEEEEcCC--CCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccc
Q psy6415 71 YLSEKAHKATTVWAAKHLPQ--NRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGS 148 (174)
Q Consensus 71 ~~~~~~h~~~~i~~v~fsP~--~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~ 148 (174)
....|.. .|.+++|+|. ++..|++|+.||.|++||+++ +.+. ..
T Consensus 204 --~~~~~~~-~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~----------------------------~~~~---~~ 249 (357)
T 3i2n_A 204 --WETNIKN-GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRT----------------------------QHPT---KG 249 (357)
T ss_dssp --EEEECSS-CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEE----------------------------EETT---TE
T ss_pred --eecCCCC-ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcC----------------------------CCcc---cc
Confidence 2246778 9999999994 456899999999999999911 0000 00
Q ss_pred cceeeeeeccccceeeeeeCCCCC
Q psy6415 149 LTLLQEATLSSQPINSLDWSADKL 172 (174)
Q Consensus 149 ~~ll~~~~~h~~~V~~l~~spd~~ 172 (174)
-....+.+|..+|++++|+|+++
T Consensus 250 -~~~~~~~~~~~~v~~~~~~~~~~ 272 (357)
T 3i2n_A 250 -FASVSEKAHKSTVWQVRHLPQNR 272 (357)
T ss_dssp -EEEEEEECCSSCEEEEEEETTEE
T ss_pred -eeeeccCCCcCCEEEEEECCCCC
Confidence 01235569999999999999975
No 109
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.78 E-value=2.4e-18 Score=149.31 Aligned_cols=102 Identities=12% Similarity=0.117 Sum_probs=79.4
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEeecCC-----CEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccc-c-eeeee
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETNLKN-----GVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREK-G-FAYLS 73 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~-----~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~-~-~~~~~ 73 (174)
+||+++.||+|+|||.++ +.....+.. .|.+++|||++ +.||+|+.||+|+|||++++.... . ..+.+
T Consensus 99 ~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG---~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~t 173 (588)
T 2j04_A 99 WMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIE---SSIVVGNEDGELQFFSIRKNSENTPEFYFESS 173 (588)
T ss_dssp CEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSS---SCEEEEETTSEEEEEECCCCTTTCCCCEEEEE
T ss_pred EEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCC---CEEEEEcCCCEEEEEECCCCccccccceeeee
Confidence 489999999999999654 433333332 59999999975 999999999999999999864200 0 11234
Q ss_pred e----cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415 74 E----KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS 111 (174)
Q Consensus 74 ~----~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~ 111 (174)
+ .+|.. .|.+|+|+|+ + +|+++.|++|++||+..
T Consensus 174 i~~~~~gh~~-~V~sVawSPd-g--Laass~D~tVrlWd~~~ 211 (588)
T 2j04_A 174 IRLSDAGSKD-WVTHIVWYED-V--LVAALSNNSVFSMTVSA 211 (588)
T ss_dssp EECSCTTCCC-CEEEEEEETT-E--EEEEETTCCEEEECCCS
T ss_pred eecccccccc-cEEEEEEcCC-c--EEEEeCCCeEEEEECCC
Confidence 3 57888 9999999995 4 78899999999999944
No 110
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.78 E-value=1.1e-17 Score=138.98 Aligned_cols=97 Identities=16% Similarity=0.264 Sum_probs=79.9
Q ss_pred CEEEEecCCcEEEEECCCCCeE------------------------EEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEE
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLK------------------------WETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLF 56 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~------------------------~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~ 56 (174)
+|++|+.||+|++||++++... ....|...|.+++.+. +.|++|+.|++|+
T Consensus 219 ~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~~~~~d~~i~ 293 (464)
T 3v7d_B 219 YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHG-----NIVVSGSYDNTLI 293 (464)
T ss_dssp EEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEET-----TEEEEEETTSCEE
T ss_pred EEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCC-----CEEEEEeCCCeEE
Confidence 3899999999999999877532 1233566788876543 8999999999999
Q ss_pred EEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 57 VFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 57 iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
+||+++.++ ...+.+|.. .|++++|+| ++..|++|+.||+|++||+
T Consensus 294 vwd~~~~~~-----~~~~~~~~~-~v~~~~~~~-~~~~l~sg~~dg~i~vwd~ 339 (464)
T 3v7d_B 294 VWDVAQMKC-----LYILSGHTD-RIYSTIYDH-ERKRCISASMDTTIRIWDL 339 (464)
T ss_dssp EEETTTTEE-----EEEECCCSS-CEEEEEEET-TTTEEEEEETTSCEEEEET
T ss_pred EEECCCCcE-----EEEecCCCC-CEEEEEEcC-CCCEEEEEeCCCcEEEEEC
Confidence 999998654 344568988 999999999 5678999999999999999
No 111
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.78 E-value=3.6e-18 Score=152.00 Aligned_cols=139 Identities=11% Similarity=0.125 Sum_probs=105.0
Q ss_pred CEEEEecCCcEEEEECCCCCe---EEEeecCCCEEEEEecCCCC----------CCCEEEEEeCCCcEEEEECCCccccc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSL---KWETNLKNGVCGVDFDRRDI----------PMNKLVATTLEAKLFVFDLKTLHREK 67 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~---~~~~~~~~~V~sv~f~~~~~----------~~~~l~s~s~Dg~I~iWD~~~~~~~~ 67 (174)
+|++|+.||+|++||++++.. .....+...|.+++|+|... +++.|++|+.||+|++||+++.....
T Consensus 115 ~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~ 194 (753)
T 3jro_A 115 LLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY 194 (753)
T ss_dssp EEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEE
T ss_pred EEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccc
Confidence 379999999999999988732 23345778899999999400 14789999999999999999764321
Q ss_pred ceeeeeecccCcCcEEEEEEcCCC--CCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccc
Q psy6415 68 GFAYLSEKAHKATTVWAAKHLPQN--RDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGV 145 (174)
Q Consensus 68 ~~~~~~~~~h~~~~i~~v~fsP~~--~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~ 145 (174)
.....+.+|.. .|++++|+|++ +.+|++|+.||+|++||+.+ . .+.
T Consensus 195 -~~~~~~~~h~~-~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~----~----------------------~~~---- 242 (753)
T 3jro_A 195 -VLESTLEGHSD-WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN----E----------------------QGP---- 242 (753)
T ss_dssp -EEEEEECCCSS-CEEEEEECCCCSSSEEEEEEESSSCEEEEEESS----S----------------------SSC----
T ss_pred -eeeeeecCCCC-cEEEEEeccCCCCCCEEEEEecCCEEEEecCCC----C----------------------CCc----
Confidence 12345678999 99999999963 77999999999999999911 0 000
Q ss_pred ccccceeeeeeccccceeeeeeCCCCCC
Q psy6415 146 PGSLTLLQEATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 146 ~~~~~ll~~~~~h~~~V~~l~~spd~~~ 173 (174)
....+....+|..+|++++|+||++-
T Consensus 243 --~~~~~~~~~~~~~~v~~l~~spdg~~ 268 (753)
T 3jro_A 243 --WKKTLLKEEKFPDVLWRASWSLSGNV 268 (753)
T ss_dssp --CBCCBSSSSCCSSCCCCEEECTTTCC
T ss_pred --ceeEEeccCCCCCceEEEEEcCCCCE
Confidence 01134455678899999999999864
No 112
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.77 E-value=1e-18 Score=161.14 Aligned_cols=98 Identities=14% Similarity=0.250 Sum_probs=83.4
Q ss_pred EEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
+++++.||+|++||+.++++..... |...|.+++|+|++ +.|++++.|++|++||+++.++. ..+.+|..
T Consensus 1058 l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~---~~l~s~s~d~~v~iwd~~~~~~~-----~~l~~h~~- 1128 (1249)
T 3sfz_A 1058 LLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDA---TKFSSTSADKTAKIWSFDLLSPL-----HELKGHNG- 1128 (1249)
T ss_dssp EEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSS---SSCEEECCSSCCCEECSSSSSCS-----BCCCCCSS-
T ss_pred EEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCC---CEEEEEcCCCcEEEEECCCccee-----eeeccCCC-
Confidence 5778888888888888887665543 67789999999974 88999999999999999987644 34468998
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.|++++|+| ++.+||+|+.||+|++||+
T Consensus 1129 ~v~~~~~s~-dg~~lat~~~dg~i~vwd~ 1156 (1249)
T 3sfz_A 1129 CVRCSAFSL-DGILLATGDDNGEIRIWNV 1156 (1249)
T ss_dssp CEEEEEECS-SSSEEEEEETTSCCCEEES
T ss_pred cEEEEEECC-CCCEEEEEeCCCEEEEEEC
Confidence 999999999 5679999999999999999
No 113
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.77 E-value=7.2e-18 Score=133.97 Aligned_cols=123 Identities=14% Similarity=0.247 Sum_probs=98.4
Q ss_pred EEEEecCCcEEEEECCC-CCeE---EEeecCCCEEEEEecC-CCCCCCEEEEEeCCCcEEEEECCCc------cccccee
Q psy6415 2 VVAGYDNGDLKMFDLKT-MSLK---WETNLKNGVCGVDFDR-RDIPMNKLVATTLEAKLFVFDLKTL------HREKGFA 70 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~-~~~~---~~~~~~~~V~sv~f~~-~~~~~~~l~s~s~Dg~I~iWD~~~~------~~~~~~~ 70 (174)
|++|+.||.|++||+++ +... ....+...|.+++|+| ++ +.|++++.||.|+|||++.. +..
T Consensus 163 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~---~~l~~~~~dg~i~i~~~~~~~~~~~~~~~---- 235 (342)
T 1yfq_A 163 LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQ---EGYACSSIDGRVAVEFFDDQGDDYNSSKR---- 235 (342)
T ss_dssp EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGG---CEEEEEETTSEEEEEECCTTCCSTTCTTC----
T ss_pred EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCC---CEEEEEecCCcEEEEEEcCCCcccccccc----
Confidence 68999999999999998 5432 2334677899999999 74 89999999999999999875 322
Q ss_pred eeeeccc---------CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCC
Q psy6415 71 YLSEKAH---------KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDI 141 (174)
Q Consensus 71 ~~~~~~h---------~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~ 141 (174)
..+..| .. .|++++|+|+ +.+||+|+.||+|++||++ +
T Consensus 236 -~~~~~~~~~~~~~~~~~-~i~~~~~s~~-~~~l~~~~~dg~i~vwd~~----------------------------~-- 282 (342)
T 1yfq_A 236 -FAFRCHRLNLKDTNLAY-PVNSIEFSPR-HKFLYTAGSDGIISCWNLQ----------------------------T-- 282 (342)
T ss_dssp -EEEECCCCCTTCCSSCC-CEEEEEECTT-TCCEEEEETTSCEEEEETT----------------------------T--
T ss_pred -eeeecccccccccccce-eEEEEEEcCC-CCEEEEecCCceEEEEcCc----------------------------c--
Confidence 223333 55 8999999994 5688999999999999991 1
Q ss_pred ccccccccceeeeeecc-ccceeeeeeCCCCCC
Q psy6415 142 PMGVPGSLTLLQEATLS-SQPINSLDWSADKLG 173 (174)
Q Consensus 142 ~~~~~~~~~ll~~~~~h-~~~V~~l~~spd~~~ 173 (174)
++++.++.+| ..+|++++ ||++-
T Consensus 283 -------~~~~~~~~~~h~~~v~~~~--~~~~~ 306 (342)
T 1yfq_A 283 -------RKKIKNFAKFNEDSVVKIA--CSDNI 306 (342)
T ss_dssp -------TEEEEECCCCSSSEEEEEE--ECSSE
T ss_pred -------HhHhhhhhcccCCCceEec--CCCCe
Confidence 3567888898 99999999 88753
No 114
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.77 E-value=1.2e-17 Score=138.65 Aligned_cols=126 Identities=17% Similarity=0.307 Sum_probs=99.9
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+|++|+.||+|++||++++++..... |...|.+++|++ +.|++|+.|++|++||+++.++ ..++.+|..
T Consensus 268 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~~g~~dg~i~iwd~~~~~~-----~~~~~~h~~ 337 (435)
T 1p22_A 268 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD-----RLVVSGSSDNTIRLWDIECGAC-----LRVLEGHEE 337 (435)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEET-----TEEEEEETTSCEEEEETTTCCE-----EEEECCCSS
T ss_pred EEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCC-----CEEEEEeCCCeEEEEECCCCCE-----EEEEeCCcC
Confidence 37899999999999999998876654 678899999974 7899999999999999998654 345568998
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS 159 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~ 159 (174)
.|.+++|. +..|++|+.||+|++||+.+... + . .......+.++.+|.
T Consensus 338 -~v~~~~~~---~~~l~sg~~dg~i~vwd~~~~~~---------------~--------~-----~~~~~~~~~~~~~h~ 385 (435)
T 1p22_A 338 -LVRCIRFD---NKRIVSGAYDGKIKVWDLVAALD---------------P--------R-----APAGTLCLRTLVEHS 385 (435)
T ss_dssp -CEEEEECC---SSEEEEEETTSCEEEEEHHHHTS---------------T--------T-----SCTTTTEEEEECCCS
T ss_pred -cEEEEEec---CCEEEEEeCCCcEEEEECCCCCC---------------c--------c-----ccccchheeeccCCC
Confidence 99999993 46899999999999999921000 0 0 000112578889999
Q ss_pred cceeeeeeC
Q psy6415 160 QPINSLDWS 168 (174)
Q Consensus 160 ~~V~~l~~s 168 (174)
.+|.+++|+
T Consensus 386 ~~v~~l~~~ 394 (435)
T 1p22_A 386 GRVFRLQFD 394 (435)
T ss_dssp SCCCCEEEC
T ss_pred CCeEEEEeC
Confidence 999999994
No 115
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.77 E-value=1.2e-17 Score=130.79 Aligned_cols=123 Identities=10% Similarity=0.088 Sum_probs=99.1
Q ss_pred CEEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+||+|+.||.|++||++++..... ..+...|.+++|+|++ +.|++++.|+.|++||+....... ....+.+|..
T Consensus 31 ~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~~~~~~~~~~~~--~~~~~~~~~~ 105 (313)
T 3odt_A 31 KVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEK---ELLLFGGKDTMINGVPLFATSGED--PLYTLIGHQG 105 (313)
T ss_dssp EEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTT---TEEEEEETTSCEEEEETTCCTTSC--C-CEECCCSS
T ss_pred EEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCC---CEEEEecCCCeEEEEEeeecCCCC--cccchhhccc
Confidence 389999999999999988876654 3467889999999974 899999999999999998753221 2345568998
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS 159 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~ 159 (174)
.|.+++|. +..|++++.||+|++||. .+.+..+.+|.
T Consensus 106 -~i~~~~~~---~~~l~~~~~d~~i~~~d~---------------------------------------~~~~~~~~~~~ 142 (313)
T 3odt_A 106 -NVCSLSFQ---DGVVISGSWDKTAKVWKE---------------------------------------GSLVYNLQAHN 142 (313)
T ss_dssp -CEEEEEEE---TTEEEEEETTSEEEEEET---------------------------------------TEEEEEEECCS
T ss_pred -CEEEEEec---CCEEEEEeCCCCEEEEcC---------------------------------------CcEEEecccCC
Confidence 99999994 358999999999999997 13466777888
Q ss_pred cceeeeeeCC-CC
Q psy6415 160 QPINSLDWSA-DK 171 (174)
Q Consensus 160 ~~V~~l~~sp-d~ 171 (174)
.+|.++.|+| ++
T Consensus 143 ~~v~~~~~~~~~~ 155 (313)
T 3odt_A 143 ASVWDAKVVSFSE 155 (313)
T ss_dssp SCEEEEEEEETTT
T ss_pred CceeEEEEccCCC
Confidence 8888888887 44
No 116
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.76 E-value=1.7e-17 Score=137.72 Aligned_cols=124 Identities=19% Similarity=0.305 Sum_probs=97.1
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
.|++|+.||+|++||++++++.... .+...+.++++++ +.|++|+.||.|++||+++.++...+. ....|..
T Consensus 291 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~~~ 363 (445)
T 2ovr_B 291 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-----NILVSGNADSTVKIWDIKTGQCLQTLQ--GPNKHQS 363 (445)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET-----TEEEEEETTSCEEEEETTTCCEEEEEC--STTSCSS
T ss_pred EEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeC-----CEEEEEeCCCeEEEEECCCCcEEEEEc--cCCCCCC
Confidence 3789999999999999999887654 3567788888874 789999999999999998876432221 1123778
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeee----
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEA---- 155 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~---- 155 (174)
.|.+++|+| .+|++|+.||+|++||++ +| +++.++
T Consensus 364 -~v~~~~~~~---~~l~s~~~dg~v~iwd~~----------------------------~~---------~~~~~~~~~~ 402 (445)
T 2ovr_B 364 -AVTCLQFNK---NFVITSSDDGTVKLWDLK----------------------------TG---------EFIRNLVTLE 402 (445)
T ss_dssp -CEEEEEECS---SEEEEEETTSEEEEEETT----------------------------TC---------CEEEEEEECT
T ss_pred -CEEEEEECC---CEEEEEeCCCeEEEEECC----------------------------CC---------ceeeeeeccc
Confidence 999999975 589999999999999991 22 234444
Q ss_pred -eccccceeeeeeCCCCC
Q psy6415 156 -TLSSQPINSLDWSADKL 172 (174)
Q Consensus 156 -~~h~~~V~~l~~spd~~ 172 (174)
.+|..+|++++|||++.
T Consensus 403 ~~~~~~~v~~~~~s~~~~ 420 (445)
T 2ovr_B 403 SGGSGGVVWRIRASNTKL 420 (445)
T ss_dssp TGGGTCEEEEEEECSSEE
T ss_pred cCCCCceEEEEEecCCEE
Confidence 57889999999999864
No 117
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.76 E-value=2.4e-17 Score=136.87 Aligned_cols=156 Identities=17% Similarity=0.165 Sum_probs=109.6
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+|++|+.||+|++||++++++.... .|...|.+++|++ +.|++|+.|++|++||+++.++ ..++.+|..
T Consensus 131 ~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-----~~l~s~~~dg~i~vwd~~~~~~-----~~~~~~h~~ 200 (445)
T 2ovr_B 131 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD-----NIIISGSTDRTLKVWNAETGEC-----IHTLYGHTS 200 (445)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEET-----TEEEEEETTSCEEEEETTTTEE-----EEEECCCSS
T ss_pred EEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecC-----CEEEEEeCCCeEEEEECCcCcE-----EEEECCCCC
Confidence 3799999999999999999887664 4778899999985 7899999999999999998654 345568999
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccc-cccceeeeecCC-CCCCcccCCCCCcc-ccccccceeeeee
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADT-NLCSIFRYSSNY-PTQRTKPDIDDIPM-GVPGSLTLLQEAT 156 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~dg~~~-~~~~~~~ll~~~~ 156 (174)
.|.+++|++ ..|++|+.||+|++||+++...... ..+........+ +........||... -...+.+.+.++.
T Consensus 201 -~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 276 (445)
T 2ovr_B 201 -TVRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ 276 (445)
T ss_dssp -CEEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEEC
T ss_pred -cEEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEec
Confidence 999999975 4799999999999999943111000 000000011111 11111122344221 1135668899999
Q ss_pred ccccceeeeeeCCCCC
Q psy6415 157 LSSQPINSLDWSADKL 172 (174)
Q Consensus 157 ~h~~~V~~l~~spd~~ 172 (174)
+|..+|.+++| |+.
T Consensus 277 ~~~~~v~~~~~--~~~ 290 (445)
T 2ovr_B 277 GHTNRVYSLQF--DGI 290 (445)
T ss_dssp CCSSCEEEEEE--CSS
T ss_pred CCCCceEEEEE--CCC
Confidence 99999999998 654
No 118
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.76 E-value=3.4e-17 Score=135.92 Aligned_cols=157 Identities=12% Similarity=0.136 Sum_probs=108.0
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+|++|+.||+|++||++++++.... .|...|.+++|++ +.|++|+.|++|++||+++..... ....+.+|..
T Consensus 185 ~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~-----~~l~s~s~dg~i~vwd~~~~~~~~--~~~~~~~~~~ 257 (435)
T 1p22_A 185 VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN-----GMMVTCSKDRSIAVWDMASPTDIT--LRRVLVGHRA 257 (435)
T ss_dssp EEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT-----TEEEEEETTSCEEEEECSSSSCCE--EEEEECCCSS
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC-----CEEEEeeCCCcEEEEeCCCCCCce--eeeEecCCCC
Confidence 4789999999999999999877654 4667899999985 689999999999999998865431 1234568988
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccc-cccceeeeecCC-CCCCcccCCCCCcc-ccccccceeeeee
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADT-NLCSIFRYSSNY-PTQRTKPDIDDIPM-GVPGSLTLLQEAT 156 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~dg~~~-~~~~~~~ll~~~~ 156 (174)
.|.+++|. +..|++|+.||+|++||+++...... ..+........+ +........||... -...+++.+.++.
T Consensus 258 -~v~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 333 (435)
T 1p22_A 258 -AVNVVDFD---DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE 333 (435)
T ss_dssp -CEEEEEEE---TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred -cEEEEEeC---CCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEe
Confidence 99999993 46899999999999999944111000 000000001111 10011122444221 1146678999999
Q ss_pred ccccceeeeeeC
Q psy6415 157 LSSQPINSLDWS 168 (174)
Q Consensus 157 ~h~~~V~~l~~s 168 (174)
+|..+|.+++|+
T Consensus 334 ~h~~~v~~~~~~ 345 (435)
T 1p22_A 334 GHEELVRCIRFD 345 (435)
T ss_dssp CCSSCEEEEECC
T ss_pred CCcCcEEEEEec
Confidence 999999999994
No 119
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.76 E-value=9.1e-18 Score=140.09 Aligned_cols=102 Identities=12% Similarity=0.104 Sum_probs=83.1
Q ss_pred CEEEEecCCcEEEEECCCCCeEE-----EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKW-----ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK 75 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~-----~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~ 75 (174)
+|++|+.||.|++||+.++.... ...|...|++|+|+|+...+++|++|+.|++|+|||+++.++... .+.
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~----~~~ 238 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDK----WLF 238 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEE----ECC
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeee----eec
Confidence 37899999999999998776432 234678899999999600137899999999999999998654322 134
Q ss_pred ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 76 AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 76 ~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
+|.. .|++++|+ ++.+|++|+.|++|++||+
T Consensus 239 ~h~~-~v~~~~~s--d~~~l~s~~~d~~v~vwd~ 269 (450)
T 2vdu_B 239 GHKH-FVSSICCG--KDYLLLSAGGDDKIFAWDW 269 (450)
T ss_dssp CCSS-CEEEEEEC--STTEEEEEESSSEEEEEET
T ss_pred CCCC-ceEEEEEC--CCCEEEEEeCCCeEEEEEC
Confidence 8988 99999999 5679999999999999999
No 120
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.75 E-value=1.2e-18 Score=146.50 Aligned_cols=97 Identities=8% Similarity=0.070 Sum_probs=78.4
Q ss_pred EEecCCcEEEEECCCC--------CeE---EE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceee
Q psy6415 4 AGYDNGDLKMFDLKTM--------SLK---WE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAY 71 (174)
Q Consensus 4 sgs~Dg~iklWDl~~~--------~~~---~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~ 71 (174)
+|+.|++|+|||++++ +.. .. ..|...|.+|+|+|+. ++.|++++.||+|+|||+++....
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~--~~~las~s~Dg~v~iwD~~~~~~~----- 185 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTV--PSMVAVCLADGSIAVLQVTETVKV----- 185 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSC--TTEEEEEETTSCEEEEEESSSEEE-----
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCC--CCEEEEEECCCeEEEEEcCCCcce-----
Confidence 7889999999998754 111 11 2367789999999963 488999999999999999986422
Q ss_pred eeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 72 LSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 72 ~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
....+|.. .|++++|+|+ +.+||+|+.||+|++||+
T Consensus 186 ~~~~~~~~-~v~~v~wspd-g~~lasgs~dg~v~iwd~ 221 (434)
T 2oit_A 186 CATLPSTV-AVTSVCWSPK-GKQLAVGKQNGTVVQYLP 221 (434)
T ss_dssp EEEECGGG-CEEEEEECTT-SSCEEEEETTSCEEEECT
T ss_pred eeccCCCC-ceeEEEEcCC-CCEEEEEcCCCcEEEEcc
Confidence 22346888 9999999995 678999999999999999
No 121
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.75 E-value=8.9e-18 Score=142.98 Aligned_cols=124 Identities=14% Similarity=0.191 Sum_probs=101.5
Q ss_pred CEEEEecCCcEEEEECCCC--------CeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCC----CcEEEEECCCccccc
Q psy6415 1 MVVAGYDNGDLKMFDLKTM--------SLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLE----AKLFVFDLKTLHREK 67 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~--------~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~D----g~I~iWD~~~~~~~~ 67 (174)
+||+|+.||+|++||+.++ .+.... .+...|.+++|+|++ +.|++++.| +.|++||...
T Consensus 80 ~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~~~~~~~~v~~~d~~~----- 151 (615)
T 1pgu_A 80 YLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEG---RRLCVVGEGRDNFGVFISWDSGN----- 151 (615)
T ss_dssp EEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTS---SEEEEEECCSSCSEEEEETTTCC-----
T ss_pred EEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCC---CEEEEeccCCCCccEEEEEECCC-----
Confidence 4899999999999999755 333333 367889999999974 899999988 7999999432
Q ss_pred ceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccccc
Q psy6415 68 GFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPG 147 (174)
Q Consensus 68 ~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~ 147 (174)
....+.+|.. .|++++|+|++..+|++++.||+|++||+ .
T Consensus 152 --~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~d~~v~vwd~-----------------------------~-------- 191 (615)
T 1pgu_A 152 --SLGEVSGHSQ-RINACHLKQSRPMRSMTVGDDGSVVFYQG-----------------------------P-------- 191 (615)
T ss_dssp --EEEECCSCSS-CEEEEEECSSSSCEEEEEETTTEEEEEET-----------------------------T--------
T ss_pred --cceeeecCCc-cEEEEEECCCCCcEEEEEeCCCcEEEEeC-----------------------------C--------
Confidence 2345568999 99999999976558999999999999999 1
Q ss_pred ccceeeeeecccc---ceeeeeeCCC-CC
Q psy6415 148 SLTLLQEATLSSQ---PINSLDWSAD-KL 172 (174)
Q Consensus 148 ~~~ll~~~~~h~~---~V~~l~~spd-~~ 172 (174)
+.+++.++.+|.. +|++++|+|+ ++
T Consensus 192 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 220 (615)
T 1pgu_A 192 PFKFSASDRTHHKQGSFVRDVEFSPDSGE 220 (615)
T ss_dssp TBEEEEEECSSSCTTCCEEEEEECSTTCC
T ss_pred CcceeeeecccCCCCceEEEEEECCCCCC
Confidence 1356888899999 9999999999 75
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.75 E-value=2.6e-17 Score=133.64 Aligned_cols=99 Identities=13% Similarity=0.183 Sum_probs=81.5
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
++++++.|++|++||++++++.....++..+.+++|+|++ +.| ++++.|++|++||+++.+... .+ .+..
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg---~~l~~~~~~d~~i~v~d~~~~~~~~-----~~-~~~~ 74 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDG---TKVYVANAHSNDVSIIDTATNNVIA-----TV-PAGS 74 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTS---SEEEEEEGGGTEEEEEETTTTEEEE-----EE-ECSS
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCC---CEEEEECCCCCeEEEEECCCCeEEE-----EE-ECCC
Confidence 4789999999999999999888777777789999999974 665 678899999999998865432 23 2334
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+.+++|+|++..++++++.|++|++||+
T Consensus 75 -~v~~~~~spdg~~l~~~~~~~~~v~v~d~ 103 (391)
T 1l0q_A 75 -SPQGVAVSPDGKQVYVTNMASSTLSVIDT 103 (391)
T ss_dssp -SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred -CccceEECCCCCEEEEEECCCCEEEEEEC
Confidence 79999999976656678888899999999
No 123
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.74 E-value=3.8e-18 Score=147.98 Aligned_cols=101 Identities=12% Similarity=0.073 Sum_probs=76.2
Q ss_pred cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc----CcEEEEEEcCCCCCEEEEEcCCC
Q psy6415 27 LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA----TTVWAAKHLPQNRDLFVTCGGSG 102 (174)
Q Consensus 27 ~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~----~~i~~v~fsP~~~~~las~s~Dg 102 (174)
+...|.+++|+|++ ..||+++.||+|+|||.++ .+..+. |.. ..|.+++||| ++++||+|+.||
T Consensus 84 ~~~~V~~vawSPdG---~~LAs~s~dg~V~iwd~~~-------~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~DG 151 (588)
T 2j04_A 84 PVCYPRVCKPSPID---DWMAVLSNNGNVSVFKDNK-------MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNEDG 151 (588)
T ss_dssp CSCCEEEEEECSSS---SCEEEEETTSCEEEEETTE-------EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEETTS
T ss_pred CCCcEEEEEECCCC---CEEEEEeCCCcEEEEeCCc-------eeeecc-CCCccccccEEEEEEcC-CCCEEEEEcCCC
Confidence 34669999999975 8999999999999999654 123334 443 1499999999 567899999999
Q ss_pred cEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccc--eeeee----eccccceeeeeeCCCC
Q psy6415 103 SLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLT--LLQEA----TLSSQPINSLDWSADK 171 (174)
Q Consensus 103 ~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~--ll~~~----~~h~~~V~~l~~spd~ 171 (174)
+|+|||++ +|.. ...+ ++.++ .||..+|.+++|||||
T Consensus 152 tVkIWd~~----------------------------~~~l----~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg 194 (588)
T 2j04_A 152 ELQFFSIR----------------------------KNSE----NTPEFYFESSIRLSDAGSKDWVTHIVWYEDV 194 (588)
T ss_dssp EEEEEECC----------------------------CCTT----TCCCCEEEEEEECSCTTCCCCEEEEEEETTE
T ss_pred EEEEEECC----------------------------CCcc----ccccceeeeeeecccccccccEEEEEEcCCc
Confidence 99999991 1100 0000 35665 7788999999999997
No 124
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.74 E-value=8.8e-18 Score=141.18 Aligned_cols=131 Identities=19% Similarity=0.250 Sum_probs=96.0
Q ss_pred EEEEecCCcEEEEECCCC-----------CeE-----EEeecCCCEEEEEecCCCCCCCEEE----EEeCCCcEEEEECC
Q psy6415 2 VVAGYDNGDLKMFDLKTM-----------SLK-----WETNLKNGVCGVDFDRRDIPMNKLV----ATTLEAKLFVFDLK 61 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~-----------~~~-----~~~~~~~~V~sv~f~~~~~~~~~l~----s~s~Dg~I~iWD~~ 61 (174)
|++|+.|+ |++|+.... ... ....+...|++++|+|++ ++|+ +|+.|++|+|||++
T Consensus 51 l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg---~~lav~~~sgs~d~~v~iwd~~ 126 (434)
T 2oit_A 51 VFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDN---LTLSACMMSSEYGSIIAFFDVR 126 (434)
T ss_dssp EEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTS---CEEEEEEEETTTEEEEEEEEHH
T ss_pred EEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCC---CEEEEEEeccCCCceEEEEEcc
Confidence 67788887 999875311 111 122345679999999974 8888 78899999999997
Q ss_pred Cc-----ccc-cceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcc
Q psy6415 62 TL-----HRE-KGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTK 135 (174)
Q Consensus 62 ~~-----~~~-~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (174)
+. ... .......+.+|.. .|++++|+|+++.+||+|+.||+|++||++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~h~~-~V~~v~~~p~~~~~las~s~Dg~v~iwD~~------------------------- 180 (434)
T 2oit_A 127 TFSNEAKQQKRPFAYHKLLKDAGG-MVIDMKWNPTVPSMVAVCLADGSIAVLQVT------------------------- 180 (434)
T ss_dssp HHHCTTCSSCCCSEEEECCCSGGG-SEEEEEECSSCTTEEEEEETTSCEEEEEES-------------------------
T ss_pred ccccCCcCCcceeeeeeccCCCCC-ceEEEEECCCCCCEEEEEECCCeEEEEEcC-------------------------
Confidence 64 110 0011334567888 999999999767899999999999999991
Q ss_pred cCCCCCccccccccceeeeeeccccceeeeeeCCCCCCC
Q psy6415 136 PDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174 (174)
Q Consensus 136 ~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~~ 174 (174)
. .+.+....+|...|++++|||||+-|
T Consensus 181 ---~---------~~~~~~~~~~~~~v~~v~wspdg~~l 207 (434)
T 2oit_A 181 ---E---------TVKVCATLPSTVAVTSVCWSPKGKQL 207 (434)
T ss_dssp ---S---------SEEEEEEECGGGCEEEEEECTTSSCE
T ss_pred ---C---------CcceeeccCCCCceeEEEEcCCCCEE
Confidence 1 12344556799999999999998643
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.74 E-value=1.2e-17 Score=137.19 Aligned_cols=96 Identities=10% Similarity=-0.012 Sum_probs=70.2
Q ss_pred EEEEecCCcEEEEECCCCCeEEEe------ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWET------NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK 75 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~------~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~ 75 (174)
++||+.|++||+||+++++++... .|...+.+.+++ +..+|+++.|++|||||+++++++ .++.
T Consensus 253 laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s-----g~~lASgS~DgTIkIWDl~tGk~l-----~tL~ 322 (356)
T 2w18_A 253 ESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK-----DHCAAAILTSGTIAIWDLLLGQCT-----ALLP 322 (356)
T ss_dssp -----CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE-----TTEEEEEETTSCEEEEETTTCSEE-----EEEC
T ss_pred eeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC-----CCEEEEEcCCCcEEEEECCCCcEE-----EEec
Confidence 589999999999999999876432 223334444444 267999999999999999997654 4556
Q ss_pred ccCcCcEE-EEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 76 AHKATTVW-AAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 76 ~h~~~~i~-~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
+|.. .++ +++||| ++.+||||+.|++|||||+
T Consensus 323 gH~~-~vvs~vafSP-DG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 323 PVSD-QHWSFVKWSG-TDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CC---CCCCEEEECS-SSSEEEEECTTSCEEEEEE
T ss_pred CCCC-CeEEEEEECC-CCCEEEEEECCCcEEEecC
Confidence 8887 666 589999 5679999999999999997
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.69 E-value=4.8e-16 Score=126.09 Aligned_cols=98 Identities=17% Similarity=0.197 Sum_probs=79.4
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
+++++.|++|++||++++++.........+.+++|+|++ +.| ++++.|++|++||+++.+.. ..+. +..
T Consensus 47 ~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg---~~l~~~~~~~~~v~v~d~~~~~~~-----~~~~-~~~- 116 (391)
T 1l0q_A 47 YVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDG---KQVYVTNMASSTLSVIDTTSNTVA-----GTVK-TGK- 116 (391)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTS---SEEEEEETTTTEEEEEETTTTEEE-----EEEE-CSS-
T ss_pred EEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCC---CEEEEEECCCCEEEEEECCCCeEE-----EEEe-CCC-
Confidence 477889999999999999988777767799999999974 666 45667899999999986543 2222 334
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+.+++|+|++..++++++.|+.|++||+
T Consensus 117 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 145 (391)
T 1l0q_A 117 SPLGLALSPDGKKLYVTNNGDKTVSVINT 145 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 68999999966556689999999999999
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.65 E-value=9.5e-16 Score=125.93 Aligned_cols=100 Identities=12% Similarity=0.077 Sum_probs=81.7
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEe------ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWET------NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE 74 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~------~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~ 74 (174)
++++++.|++|++||+++++..... .|...|.+++|+|++ ..+++++.|+.|++||+++.+.. ..+
T Consensus 136 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~s~~~d~~v~~~d~~~~~~~-----~~~ 207 (433)
T 3bws_A 136 LAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHN---ELWVSQMQANAVHVFDLKTLAYK-----ATV 207 (433)
T ss_dssp EEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGT---EEEEEEGGGTEEEEEETTTCCEE-----EEE
T ss_pred EEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCC---EEEEEECCCCEEEEEECCCceEE-----EEE
Confidence 3677888999999999999876532 345679999998863 78899999999999999886543 334
Q ss_pred cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
..|.. .+.+++|+|++..++++++.|++|++||+
T Consensus 208 ~~~~~-~~~~~~~~~~~~~l~~~~~~~~~i~~~d~ 241 (433)
T 3bws_A 208 DLTGK-WSKILLYDPIRDLVYCSNWISEDISVIDR 241 (433)
T ss_dssp ECSSS-SEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cCCCC-CeeEEEEcCCCCEEEEEecCCCcEEEEEC
Confidence 47777 89999999976666678889999999999
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.65 E-value=5.2e-15 Score=123.14 Aligned_cols=117 Identities=15% Similarity=0.144 Sum_probs=89.4
Q ss_pred CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCC---cEEEEECCCcccccceeeeeecccCcCcEEEE
Q psy6415 9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEA---KLFVFDLKTLHREKGFAYLSEKAHKATTVWAA 85 (174)
Q Consensus 9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg---~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v 85 (174)
++|++||++++.......+...|.+++|+|++ +.|++++.|+ .|++||++++++. .+..|.. .+.++
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg---~~la~~s~~~~~~~i~~~d~~tg~~~------~l~~~~~-~~~~~ 228 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPDG---SKLAYVTFESGRSALVIQTLANGAVR------QVASFPR-HNGAP 228 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEEEEEECTTS---SEEEEEECTTSSCEEEEEETTTCCEE------EEECCSS-CEEEE
T ss_pred ceEEEEcCCCCCCEEEeCCCCcceeeEEcCCC---CEEEEEEecCCCcEEEEEECCCCcEE------EeecCCC-cccCE
Confidence 79999999876665555677889999999974 8999999885 9999999986532 2346777 89999
Q ss_pred EEcCCCCCEEEEEcCCCc--EEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccccee
Q psy6415 86 KHLPQNRDLFVTCGGSGS--LNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPIN 163 (174)
Q Consensus 86 ~fsP~~~~~las~s~Dg~--V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~ 163 (174)
+|+|++..++++++.||. |++||++ .| + +..+..|...+.
T Consensus 229 ~~spdg~~la~~~~~~g~~~i~~~d~~----------------------------~~---------~-~~~l~~~~~~~~ 270 (415)
T 2hqs_A 229 AFSPDGSKLAFALSKTGSLNLYVMDLA----------------------------SG---------Q-IRQVTDGRSNNT 270 (415)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETT----------------------------TC---------C-EEECCCCSSCEE
T ss_pred EEcCCCCEEEEEEecCCCceEEEEECC----------------------------CC---------C-EEeCcCCCCccc
Confidence 999965444447877776 8888981 11 1 245567778888
Q ss_pred eeeeCCCCCC
Q psy6415 164 SLDWSADKLG 173 (174)
Q Consensus 164 ~l~~spd~~~ 173 (174)
+++|||||+.
T Consensus 271 ~~~~spdg~~ 280 (415)
T 2hqs_A 271 EPTWFPDSQN 280 (415)
T ss_dssp EEEECTTSSE
T ss_pred ceEECCCCCE
Confidence 8899998863
No 129
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.65 E-value=1.9e-15 Score=124.17 Aligned_cols=124 Identities=10% Similarity=0.079 Sum_probs=96.6
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEe--------CCCcEEEEECCCcccccceeeee
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATT--------LEAKLFVFDLKTLHREKGFAYLS 73 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s--------~Dg~I~iWD~~~~~~~~~~~~~~ 73 (174)
+++++.|++|++||+++++..........+.+++|+|++ +.|++++ .|+.|++||+++.+... .
T Consensus 227 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g---~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~-----~ 298 (433)
T 3bws_A 227 YCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDG---KELYIAQFSASNQESGGGRLGIYSMDKEKLID-----T 298 (433)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTS---SEEEEEEEESCTTCSCCEEEEEEETTTTEEEE-----E
T ss_pred EEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCC---CEEEEEECCCCccccCCCeEEEEECCCCcEEe-----e
Confidence 356778999999999999887766666679999999974 7888877 58999999999865322 1
Q ss_pred ecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceee
Q psy6415 74 EKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQ 153 (174)
Q Consensus 74 ~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~ 153 (174)
..|.. .+.+++|+|++..++++++.|++|++||++ . ++++.
T Consensus 299 -~~~~~-~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~----------------------------~---------~~~~~ 339 (433)
T 3bws_A 299 -IGPPG-NKRHIVSGNTENKIYVSDMCCSKIEVYDLK----------------------------E---------KKVQK 339 (433)
T ss_dssp -EEEEE-CEEEEEECSSTTEEEEEETTTTEEEEEETT----------------------------T---------TEEEE
T ss_pred -ccCCC-CcceEEECCCCCEEEEEecCCCEEEEEECC----------------------------C---------CcEEE
Confidence 25556 789999999766788999999999999991 1 13344
Q ss_pred eeeccccceeeeeeCCCCCC
Q psy6415 154 EATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 154 ~~~~h~~~V~~l~~spd~~~ 173 (174)
.+. |...+.+++|+||++.
T Consensus 340 ~~~-~~~~~~~~~~s~dg~~ 358 (433)
T 3bws_A 340 SIP-VFDKPNTIALSPDGKY 358 (433)
T ss_dssp EEE-CSSSEEEEEECTTSSE
T ss_pred Eec-CCCCCCeEEEcCCCCE
Confidence 443 5677889999998863
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.58 E-value=8.4e-14 Score=115.80 Aligned_cols=97 Identities=12% Similarity=0.114 Sum_probs=73.9
Q ss_pred EEEEecCC---cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEE-EEeCCCc--EEEEECCCcccccceeeeeec
Q psy6415 2 VVAGYDNG---DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLV-ATTLEAK--LFVFDLKTLHREKGFAYLSEK 75 (174)
Q Consensus 2 lasgs~Dg---~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~-s~s~Dg~--I~iWD~~~~~~~~~~~~~~~~ 75 (174)
||+++.|+ +|++||++++++.....+...+.+++|+|++ +.|+ +++.|+. |++||+++.+. ..+.
T Consensus 193 la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg---~~la~~~~~~g~~~i~~~d~~~~~~------~~l~ 263 (415)
T 2hqs_A 193 LAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDG---SKLAFALSKTGSLNLYVMDLASGQI------RQVT 263 (415)
T ss_dssp EEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTS---SEEEEEECTTSSCEEEEEETTTCCE------EECC
T ss_pred EEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCC---CEEEEEEecCCCceEEEEECCCCCE------EeCc
Confidence 77888875 9999999999887656667789999999974 7777 6776665 99999988643 2345
Q ss_pred ccCcCcEEEEEEcCCCCCEEEEEcC-CC--cEEEEec
Q psy6415 76 AHKATTVWAAKHLPQNRDLFVTCGG-SG--SLNLWQL 109 (174)
Q Consensus 76 ~h~~~~i~~v~fsP~~~~~las~s~-Dg--~V~lWd~ 109 (174)
.|.. .+.+++|+|+ +..|+.++. ++ .|.+||+
T Consensus 264 ~~~~-~~~~~~~spd-g~~l~~~s~~~g~~~i~~~d~ 298 (415)
T 2hqs_A 264 DGRS-NNTEPTWFPD-SQNLAFTSDQAGRPQVYKVNI 298 (415)
T ss_dssp CCSS-CEEEEEECTT-SSEEEEEECTTSSCEEEEEET
T ss_pred CCCC-cccceEECCC-CCEEEEEECCCCCcEEEEEEC
Confidence 7777 8999999995 455666654 56 4555566
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.52 E-value=2.9e-13 Score=116.77 Aligned_cols=98 Identities=12% Similarity=0.084 Sum_probs=78.3
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEEC--CCcccccceeeeeecccC
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL--KTLHREKGFAYLSEKAHK 78 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~--~~~~~~~~~~~~~~~~h~ 78 (174)
++++++.|++|.+||..+++++........+.+++|+|++ ++|++++.|++|++||+ ++.++. .++. +.
T Consensus 151 ~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg---~~l~v~~~d~~V~v~D~~~~t~~~~-----~~i~-~g 221 (543)
T 1nir_A 151 FSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASG---RYLLVIGRDARIDMIDLWAKEPTKV-----AEIK-IG 221 (543)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTS---CEEEEEETTSEEEEEETTSSSCEEE-----EEEE-CC
T ss_pred EEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCC---CEEEEECCCCeEEEEECcCCCCcEE-----EEEe-cC
Confidence 3688999999999999999988776644459999999974 89999999999999999 665432 3333 33
Q ss_pred cCcEEEEEEcC----CCCCEEEEEc-CCCcEEEEec
Q psy6415 79 ATTVWAAKHLP----QNRDLFVTCG-GSGSLNLWQL 109 (174)
Q Consensus 79 ~~~i~~v~fsP----~~~~~las~s-~Dg~V~lWd~ 109 (174)
. ..+.++|+| ++. ++++++ .+++|.+||.
T Consensus 222 ~-~p~~va~sp~~~~dg~-~l~v~~~~~~~v~v~D~ 255 (543)
T 1nir_A 222 I-EARSVESSKFKGYEDR-YTIAGAYWPPQFAIMDG 255 (543)
T ss_dssp S-EEEEEEECCSTTCTTT-EEEEEEEESSEEEEEET
T ss_pred C-CcceEEeCCCcCCCCC-EEEEEEccCCeEEEEec
Confidence 4 679999999 765 455555 6999999999
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.48 E-value=4.6e-13 Score=102.95 Aligned_cols=127 Identities=12% Similarity=0.127 Sum_probs=91.7
Q ss_pred EEEecCCcEEEEEC--CCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEe-CCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 3 VAGYDNGDLKMFDL--KTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATT-LEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 3 asgs~Dg~iklWDl--~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s-~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
++++.|+.++||++ .++.......+...+.+++|+|++ +.|+.++ .|+.++||+++.... ....+..|..
T Consensus 145 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg---~~l~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~ 217 (297)
T 2ojh_A 145 YCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDG---RWIYFNSSRTGQMQIWRVRVDGS----SVERITDSAY 217 (297)
T ss_dssp EEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTS---SEEEEEECTTSSCEEEEEETTSS----CEEECCCCSE
T ss_pred EEECCCCceEEEEEECCCCcceEcccCCCccccceECCCC---CEEEEEecCCCCccEEEECCCCC----CcEEEecCCc
Confidence 47888999999995 455554444556789999999974 7777655 699999999873211 1234456777
Q ss_pred CcEEEEEEcCCCCCEEEEEcCC-----------CcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccc
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGS-----------GSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGS 148 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~D-----------g~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~ 148 (174)
.+.+++|+|+ +..|++++.+ +.|++||++ .| .
T Consensus 218 -~~~~~~~s~d-g~~l~~~~~~~~~~~~~~~~~~~l~~~d~~----------------------------~~-------~ 260 (297)
T 2ojh_A 218 -GDWFPHPSPS-GDKVVFVSYDADVFDHPRDLDVRVQLMDMD----------------------------GG-------N 260 (297)
T ss_dssp -EEEEEEECTT-SSEEEEEEEETTCCSCCSSEEEEEEEEETT----------------------------SC-------S
T ss_pred -ccCCeEECCC-CCEEEEEEcCCCCCcccccCceEEEEEecC----------------------------CC-------C
Confidence 8999999995 5667777665 569999991 11 1
Q ss_pred cceeeeeeccccceeeeeeCCCCCC
Q psy6415 149 LTLLQEATLSSQPINSLDWSADKLG 173 (174)
Q Consensus 149 ~~ll~~~~~h~~~V~~l~~spd~~~ 173 (174)
.+.+..+.+|...|.+++||||++-
T Consensus 261 ~~~~~~~~~~~~~~~~~~~spdg~~ 285 (297)
T 2ojh_A 261 VETLFDLFGGQGTMNSPNWSPDGDE 285 (297)
T ss_dssp CEEEEEEEESTTTSCSCCBCTTSSE
T ss_pred ceeeeccCCCCcccccceECCCCCE
Confidence 1245666788999999999999874
No 133
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.47 E-value=3.4e-13 Score=106.24 Aligned_cols=105 Identities=10% Similarity=0.074 Sum_probs=75.0
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEeecCC---CEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETNLKN---GVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHREKGFAYLSEKA 76 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~---~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~ 76 (174)
+|++++.|++|++||+.+++......... .+..++|+|++ +.+ ++++.++.|.+||+.+.+....+.......
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg---~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 79 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGG---RIAYATVNKSESLVKIDLVTGETLGRIDLSTPEE 79 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTS---SEEEEEETTTTEEEEEETTTCCEEEEEECCBTTE
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCC---CEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccc
Confidence 47899999999999999998876665444 58899999974 555 566778999999998866432221100000
Q ss_pred cCcCcEEEEEEcCCCCCEEEEEc------------CCCcEEEEecc
Q psy6415 77 HKATTVWAAKHLPQNRDLFVTCG------------GSGSLNLWQLV 110 (174)
Q Consensus 77 h~~~~i~~v~fsP~~~~~las~s------------~Dg~V~lWd~~ 110 (174)
|.. .+..++|+|+ +..+++++ .++.|.+||++
T Consensus 80 ~~~-~~~~~~~s~d-g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~ 123 (337)
T 1pby_B 80 RVK-SLFGAALSPD-GKTLAIYESPVRLELTHFEVQPTRVALYDAE 123 (337)
T ss_dssp EEE-CTTCEEECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEETT
T ss_pred ccc-cccceEECCC-CCEEEEEecccccccccccccCceEEEEECC
Confidence 223 4568999995 44556664 57999999993
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.47 E-value=3.7e-13 Score=103.48 Aligned_cols=95 Identities=14% Similarity=0.199 Sum_probs=73.5
Q ss_pred EEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCC-cccccceeeeeecccC-cCc
Q psy6415 4 AGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKT-LHREKGFAYLSEKAHK-ATT 81 (174)
Q Consensus 4 sgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~-~~~~~~~~~~~~~~h~-~~~ 81 (174)
+++.|++|++||+++++......+...|.+++|+|++ +.|++++ ++.|++||+++ .+... ....|. . .
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg---~~l~~~~-~~~i~~~d~~~~~~~~~-----~~~~~~~~-~ 86 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDG---KYLLLNS-EGLLYRLSLAGDPSPEK-----VDTGFATI-C 86 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTS---SEEEEEE-TTEEEEEESSSCCSCEE-----CCCTTCCC-B
T ss_pred CCCcceeEEEEeCCCCceeeeccCCcceEeeEECCCC---CEEEEEc-CCeEEEEeCCCCCCceE-----eccccccc-c
Confidence 3467899999999999887666778889999999974 7888876 88999999988 65321 122443 4 7
Q ss_pred EEEEEEcCCCCCEEEEEc--CCCcEEEEec
Q psy6415 82 VWAAKHLPQNRDLFVTCG--GSGSLNLWQL 109 (174)
Q Consensus 82 i~~v~fsP~~~~~las~s--~Dg~V~lWd~ 109 (174)
+.+++|+|+ +..|++++ .++.++||.+
T Consensus 87 ~~~~~~spd-g~~l~~~~~~~~~~~~l~~~ 115 (297)
T 2ojh_A 87 NNDHGISPD-GALYAISDKVEFGKSAIYLL 115 (297)
T ss_dssp CSCCEECTT-SSEEEEEECTTTSSCEEEEE
T ss_pred ccceEECCC-CCEEEEEEeCCCCcceEEEE
Confidence 889999995 56778887 5567888877
No 135
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.45 E-value=1.5e-13 Score=120.35 Aligned_cols=95 Identities=8% Similarity=0.055 Sum_probs=71.7
Q ss_pred EEEecCCcEEEEECCCCCeEEEeecCC----CEEEEEecCCCCCCCEEEEEeC---------CCcEEEEECCCcccccce
Q psy6415 3 VAGYDNGDLKMFDLKTMSLKWETNLKN----GVCGVDFDRRDIPMNKLVATTL---------EAKLFVFDLKTLHREKGF 69 (174)
Q Consensus 3 asgs~Dg~iklWDl~~~~~~~~~~~~~----~V~sv~f~~~~~~~~~l~s~s~---------Dg~I~iWD~~~~~~~~~~ 69 (174)
+..+.|++|++||+.+++......+.. .|.+++|||++ +.||+++. |++|++||+.+++....
T Consensus 30 ~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg---~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~- 105 (719)
T 1z68_A 30 LHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDR---QFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG- 105 (719)
T ss_dssp EEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTS---SEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS-
T ss_pred EEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCC---CeEEEEecCceeEEeecceEEEEEECCCCccccc-
Confidence 344569999999999998776554332 48999999974 88988876 79999999998754210
Q ss_pred eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 70 AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 70 ~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
..+ .. .+.+++|||+ +..||.++ |++|++||+
T Consensus 106 --~~l---~~-~~~~~~~SPD-G~~la~~~-~~~i~~~~~ 137 (719)
T 1z68_A 106 --NEL---PR-PIQYLCWSPV-GSKLAYVY-QNNIYLKQR 137 (719)
T ss_dssp --SCC---CS-SBCCEEECSS-TTCEEEEE-TTEEEEESS
T ss_pred --eec---Cc-ccccceECCC-CCEEEEEE-CCeEEEEeC
Confidence 111 24 6889999995 55677765 889999999
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.44 E-value=1.2e-13 Score=120.69 Aligned_cols=95 Identities=6% Similarity=0.004 Sum_probs=72.1
Q ss_pred ecCCcEEEEECCCCCeEEEeecCC----CEEEEEecCCCCCCCEEEEEeCC---------CcEEEEECCCcccccceeee
Q psy6415 6 YDNGDLKMFDLKTMSLKWETNLKN----GVCGVDFDRRDIPMNKLVATTLE---------AKLFVFDLKTLHREKGFAYL 72 (174)
Q Consensus 6 s~Dg~iklWDl~~~~~~~~~~~~~----~V~sv~f~~~~~~~~~l~s~s~D---------g~I~iWD~~~~~~~~~~~~~ 72 (174)
+.||+|++||+.++++......+. .|.+++|+|++ ++||+++.+ +.|++||+++++.. .+.
T Consensus 34 ~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg---~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~---~l~ 107 (723)
T 1xfd_A 34 EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDR---EYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ---SLD 107 (723)
T ss_dssp CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTS---SEEEEEESCCCCSSSCCCSEEEEEESSSCCCE---ECC
T ss_pred eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCC---CEEEEEecCccceeecceeeEEEEECCCCceE---ecc
Confidence 679999999999998766554433 48999999974 889998775 78889999986531 122
Q ss_pred eecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 73 SEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 73 ~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
....|.. .+..++|||+ +..||.++. +.|++||+
T Consensus 108 ~~~~~~~-~~~~~~~SPd-G~~la~~~~-~~i~~~~~ 141 (723)
T 1xfd_A 108 PPEVSNA-KLQYAGWGPK-GQQLIFIFE-NNIYYCAH 141 (723)
T ss_dssp CTTCCSC-CCSBCCBCSS-TTCEEEEET-TEEEEESS
T ss_pred CCccccc-cccccEECCC-CCEEEEEEC-CeEEEEEC
Confidence 2234555 5889999995 556787775 79999999
No 137
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.44 E-value=2.3e-12 Score=111.20 Aligned_cols=106 Identities=16% Similarity=0.148 Sum_probs=83.3
Q ss_pred CEEEEecCCcEEEEEC--CCCCeEEEeecCCCEEEEEecC----CCCCCCEEEEEe-CCCcEEEEECCCcccccceeeee
Q psy6415 1 MVVAGYDNGDLKMFDL--KTMSLKWETNLKNGVCGVDFDR----RDIPMNKLVATT-LEAKLFVFDLKTLHREKGFAYLS 73 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl--~~~~~~~~~~~~~~V~sv~f~~----~~~~~~~l~s~s-~Dg~I~iWD~~~~~~~~~~~~~~ 73 (174)
+|++++.|++|++||+ .+++++........+.+|+|+| ++ ++|++++ .+++|+|||..+.++++.+....
T Consensus 192 ~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg---~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g 268 (543)
T 1nir_A 192 YLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYED---RYTIAGAYWPPQFAIMDGETLEPKQIVSTRG 268 (543)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTT---TEEEEEEEESSEEEEEETTTCCEEEEEECCE
T ss_pred EEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCC---CEEEEEEccCCeEEEEeccccccceeecccC
Confidence 3788899999999999 7888777666667799999999 75 7888777 58999999999877654332111
Q ss_pred e-----cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 74 E-----KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 74 ~-----~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
. .-|....+.++.|+|+++.++++...+++|.+||+
T Consensus 269 ~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~ 309 (543)
T 1nir_A 269 MTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNY 309 (543)
T ss_dssp ECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEEC
T ss_pred cccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEe
Confidence 0 01322268899999988889999999999999999
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.44 E-value=4.2e-12 Score=100.50 Aligned_cols=98 Identities=12% Similarity=0.173 Sum_probs=71.2
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeec-CCCEEEEEecCCCCCCCEEEEE-eCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNL-KNGVCGVDFDRRDIPMNKLVAT-TLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~-~~~V~sv~f~~~~~~~~~l~s~-s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
+++++.+++|++||+.++++...... ...+ +++|+|++ +.|+++ ..++.|.+||+++.+.. ...+..+..
T Consensus 13 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg---~~l~~~~~~~~~i~~~d~~~~~~~----~~~~~~~~~ 84 (331)
T 3u4y_A 13 IVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDC---SNVVVTSDFCQTLVQIETQLEPPK----VVAIQEGQS 84 (331)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSS---CEEEEEESTTCEEEEEECSSSSCE----EEEEEECSS
T ss_pred EEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCC---CEEEEEeCCCCeEEEEECCCCcee----EEecccCCC
Confidence 67889999999999999988765543 3445 99999974 666555 45899999999886531 223334555
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCC---cEEEEec
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSG---SLNLWQL 109 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg---~V~lWd~ 109 (174)
+..+++|+|+ +..++++..++ .|++||+
T Consensus 85 -~~~~~~~s~d-g~~l~~~~~~~~~~~i~v~d~ 115 (331)
T 3u4y_A 85 -SMADVDITPD-DQFAVTVTGLNHPFNMQSYSF 115 (331)
T ss_dssp -CCCCEEECTT-SSEEEECCCSSSSCEEEEEET
T ss_pred -CccceEECCC-CCEEEEecCCCCcccEEEEEC
Confidence 5555999995 45666555553 8999999
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.42 E-value=2e-12 Score=113.44 Aligned_cols=95 Identities=17% Similarity=0.191 Sum_probs=74.2
Q ss_pred EEEEec-CC-----cEEEEECCCCCeEEEeecC-------------------------CCEEEEEecCCCCCCCEEEEEe
Q psy6415 2 VVAGYD-NG-----DLKMFDLKTMSLKWETNLK-------------------------NGVCGVDFDRRDIPMNKLVATT 50 (174)
Q Consensus 2 lasgs~-Dg-----~iklWDl~~~~~~~~~~~~-------------------------~~V~sv~f~~~~~~~~~l~s~s 50 (174)
||+++. |+ +|++||+.+++........ ..|.+++|+|++ +.|++++
T Consensus 51 la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg---~~l~~~~ 127 (741)
T 2ecf_A 51 VTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDA---QRLLFPL 127 (741)
T ss_dssp EEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTS---SEEEEEE
T ss_pred EEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCC---CEEEEEe
Confidence 778887 88 9999999999876554321 237889999974 8898888
Q ss_pred CCCcEEEEECCCc---ccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 51 LEAKLFVFDLKTL---HREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 51 ~Dg~I~iWD~~~~---~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
. +.|++||+.+. ... .+..|.. .+..++|||+ +..||.++ ++.|++||+
T Consensus 128 ~-~~i~~~d~~~~~~~~~~------~l~~~~~-~~~~~~~SPD-G~~la~~~-~~~i~~~d~ 179 (741)
T 2ecf_A 128 G-GELYLYDLKQEGKAAVR------QLTHGEG-FATDAKLSPK-GGFVSFIR-GRNLWVIDL 179 (741)
T ss_dssp T-TEEEEEESSSCSTTSCC------BCCCSSS-CEEEEEECTT-SSEEEEEE-TTEEEEEET
T ss_pred C-CcEEEEECCCCCcceEE------EcccCCc-ccccccCCCC-CCEEEEEe-CCcEEEEec
Confidence 6 99999999886 321 2346667 8999999995 56778776 569999999
No 140
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.41 E-value=1.4e-12 Score=103.39 Aligned_cols=100 Identities=9% Similarity=0.094 Sum_probs=74.0
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEeecCC--CEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETNLKN--GVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHREKGFAYLSEKAH 77 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~--~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h 77 (174)
++++++.|++|++||+.+++......... .+..++|+|++ +.+ +++..++.|.+||+++.+....+. . .+
T Consensus 13 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg---~~~~v~~~~~~~i~~~d~~t~~~~~~~~---~-~~ 85 (349)
T 1jmx_B 13 YMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDN---RTAYVLNNHYGDIYGIDLDTCKNTFHAN---L-SS 85 (349)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTS---SEEEEEETTTTEEEEEETTTTEEEEEEE---S-CC
T ss_pred EEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCC---CEEEEEeCCCCcEEEEeCCCCcEEEEEE---c-cc
Confidence 36889999999999999998776655444 68899999974 655 566789999999998865432111 1 12
Q ss_pred -----CcCcEEEEEEcCCCCCEEEEEcCC------------CcEEEEec
Q psy6415 78 -----KATTVWAAKHLPQNRDLFVTCGGS------------GSLNLWQL 109 (174)
Q Consensus 78 -----~~~~i~~v~fsP~~~~~las~s~D------------g~V~lWd~ 109 (174)
.. .+..++|+|+ +..|++++.+ +.|.+||+
T Consensus 86 ~~~~~~~-~~~~~~~spd-g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~ 132 (349)
T 1jmx_B 86 VPGEVGR-SMYSFAISPD-GKEVYATVNPTQRLNDHYVVKPPRLEVFST 132 (349)
T ss_dssp STTEEEE-CSSCEEECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEEG
T ss_pred ccccccc-cccceEECCC-CCEEEEEcccccccccccccCCCeEEEEEC
Confidence 12 3778999995 5566767655 89999999
No 141
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.41 E-value=2.5e-12 Score=117.85 Aligned_cols=98 Identities=14% Similarity=0.180 Sum_probs=77.7
Q ss_pred EEEEecCCcEE-EEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 2 VVAGYDNGDLK-MFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 2 lasgs~Dg~ik-lWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
|+.+++++.|. +||+.+++......+...+.+++|+|++ +.|++++.++.|++||+++++.. .....|..
T Consensus 351 l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG---~~la~~~~~~~v~~~d~~tg~~~-----~~~~~~~~- 421 (1045)
T 1k32_A 351 FIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNG---KFAVVANDRFEIMTVDLETGKPT-----VIERSREA- 421 (1045)
T ss_dssp EEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTS---SEEEEEETTSEEEEEETTTCCEE-----EEEECSSS-
T ss_pred EEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCC---CEEEEECCCCeEEEEECCCCceE-----EeccCCCC-
Confidence 56777788888 9999888765444455779999999974 89999999999999999886532 12336777
Q ss_pred cEEEEEEcCCCCCEEEEEcCCC----------cEEEEec
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSG----------SLNLWQL 109 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg----------~V~lWd~ 109 (174)
.+.+++|||+ +..||+++.++ .|++||+
T Consensus 422 ~v~~~~~SpD-G~~la~~~~~~~~~~~~~~~~~i~l~d~ 459 (1045)
T 1k32_A 422 MITDFTISDN-SRFIAYGFPLKHGETDGYVMQAIHVYDM 459 (1045)
T ss_dssp CCCCEEECTT-SCEEEEEEEECSSTTCSCCEEEEEEEET
T ss_pred CccceEECCC-CCeEEEEecCccccccCCCCCeEEEEEC
Confidence 8999999995 56777776654 9999999
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.40 E-value=9.8e-12 Score=98.38 Aligned_cols=103 Identities=10% Similarity=0.048 Sum_probs=73.2
Q ss_pred EEEEecCC---cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEE-EEEeCCCc-EEEEECCCcccccceeeeeecc
Q psy6415 2 VVAGYDNG---DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKL-VATTLEAK-LFVFDLKTLHREKGFAYLSEKA 76 (174)
Q Consensus 2 lasgs~Dg---~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~-I~iWD~~~~~~~~~~~~~~~~~ 76 (174)
|+++..++ .|++||+++++............+++|+|++ +.| ++...++. |++||+.............+ .
T Consensus 98 l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg---~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~-~ 173 (331)
T 3u4y_A 98 AVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNG---NGLILIDRSSANTVRRFKIDADGVLFDTGQEFI-S 173 (331)
T ss_dssp EEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTS---SCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE-C
T ss_pred EEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCC---CEEEEEecCCCceEEEEEECCCCcEeecCCccc-c
Confidence 44444443 8999999999887766666778999999975 544 55667788 99999985332111101111 2
Q ss_pred cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
... ....++|+|++..+++++..+++|++||+
T Consensus 174 ~~~-~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 205 (331)
T 3u4y_A 174 GGT-RPFNITFTPDGNFAFVANLIGNSIGILET 205 (331)
T ss_dssp SSS-SEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCC-CccceEECCCCCEEEEEeCCCCeEEEEEC
Confidence 334 67899999966557788888999999999
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.40 E-value=2e-12 Score=102.07 Aligned_cols=100 Identities=10% Similarity=0.098 Sum_probs=71.2
Q ss_pred EEEEecCCcEEEEECC-CCCe--EEEeecCCCEEEEEecCCCCCCCEEEEEeCC-CcEEEEECC--Ccccccceeeeeec
Q psy6415 2 VVAGYDNGDLKMFDLK-TMSL--KWETNLKNGVCGVDFDRRDIPMNKLVATTLE-AKLFVFDLK--TLHREKGFAYLSEK 75 (174)
Q Consensus 2 lasgs~Dg~iklWDl~-~~~~--~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D-g~I~iWD~~--~~~~~~~~~~~~~~ 75 (174)
+++++.|+.|++||+. ++.. .....+...+.+++|+|++ +.|++++.+ +.|++||+. +.+.. ....+.
T Consensus 8 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg---~~l~~~~~~~~~v~~~~~~~~~~~~~---~~~~~~ 81 (343)
T 1ri6_A 8 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDK---RYLYVGVRPEFRVLAYRIAPDDGALT---FAAESA 81 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTS---SEEEEEETTTTEEEEEEECTTTCCEE---EEEEEE
T ss_pred EEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCC---CEEEEeecCCCeEEEEEecCCCCcee---eccccc
Confidence 4566889999999995 3433 3334566778899999974 778887776 999999997 33311 112222
Q ss_pred ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 76 AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 76 ~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
. .. .+..++|+|++..+++++..++.|++||+
T Consensus 82 ~-~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 82 L-PG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp C-SS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred c-CC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 2 23 57899999966556666667999999999
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.40 E-value=1.4e-11 Score=97.09 Aligned_cols=104 Identities=13% Similarity=0.082 Sum_probs=69.6
Q ss_pred EEEEe-cCCcEEEEECCC-CCeEEE------eecCCCEEEEEecCCCCCCCEEE-EEeCCCcEEEEECCC--ccccccee
Q psy6415 2 VVAGY-DNGDLKMFDLKT-MSLKWE------TNLKNGVCGVDFDRRDIPMNKLV-ATTLEAKLFVFDLKT--LHREKGFA 70 (174)
Q Consensus 2 lasgs-~Dg~iklWDl~~-~~~~~~------~~~~~~V~sv~f~~~~~~~~~l~-s~s~Dg~I~iWD~~~--~~~~~~~~ 70 (174)
|++++ .|+.|++||+++ ++.... ......+..++|+|++ +.|+ ++..++.|++||++. .+......
T Consensus 143 l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg---~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~ 219 (343)
T 1ri6_A 143 LWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNE---QYAYCVNELNSSVDVWELKDPHGNIECVQT 219 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTS---SEEEEEETTTTEEEEEESSCTTSCCEEEEE
T ss_pred EEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCC---CEEEEEeCCCCEEEEEEecCCCCcEEEEee
Confidence 44455 899999999987 655321 1223578899999974 6564 555899999999964 22110001
Q ss_pred eeeec-cc--CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 71 YLSEK-AH--KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 71 ~~~~~-~h--~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
...+. .+ .. .+..++|+|++..++++++.|+.|++||+
T Consensus 220 ~~~~~~~~~~~~-~~~~i~~s~dg~~l~v~~~~~~~i~v~d~ 260 (343)
T 1ri6_A 220 LDMMPENFSDTR-WAADIHITPDGRHLYACDRTASLITVFSV 260 (343)
T ss_dssp EECSCTTCCSCC-CEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ccccCccccccC-CccceEECCCCCEEEEEecCCCEEEEEEE
Confidence 11111 11 23 56789999976667778889999999999
No 145
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.39 E-value=1.2e-12 Score=112.28 Aligned_cols=94 Identities=13% Similarity=0.076 Sum_probs=72.3
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCC----CcEEEEECCCcccccceeeeeeccc
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLE----AKLFVFDLKTLHREKGFAYLSEKAH 77 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D----g~I~iWD~~~~~~~~~~~~~~~~~h 77 (174)
+++++.|+ +.|||+.++++.....+.. .+++|+|++ +.|++++.| ..|++||+++++. ..+..|
T Consensus 126 ~~s~~~~~-~~l~d~~~g~~~~l~~~~~--~~~~~spDG---~~la~~~~~~~~~~~i~~~d~~~g~~------~~l~~~ 193 (582)
T 3o4h_A 126 FTGATEDR-VALYALDGGGLRELARLPG--FGFVSDIRG---DLIAGLGFFGGGRVSLFTSNLSSGGL------RVFDSG 193 (582)
T ss_dssp EEEECSSC-EEEEEEETTEEEEEEEESS--CEEEEEEET---TEEEEEEEEETTEEEEEEEETTTCCC------EEECCS
T ss_pred EEecCCCC-ceEEEccCCcEEEeecCCC--ceEEECCCC---CEEEEEEEcCCCCeEEEEEcCCCCCc------eEeecC
Confidence 44555555 4599999987765544443 789999974 899988877 7899999988653 234577
Q ss_pred CcCcEEEEEEcCCCCCEEEEEcCCC--cEEEEec
Q psy6415 78 KATTVWAAKHLPQNRDLFVTCGGSG--SLNLWQL 109 (174)
Q Consensus 78 ~~~~i~~v~fsP~~~~~las~s~Dg--~V~lWd~ 109 (174)
.. .+.+++|||+ +..||+++.|| +|++||+
T Consensus 194 ~~-~~~~~~~SpD-G~~l~~~~~~~~~~i~~~d~ 225 (582)
T 3o4h_A 194 EG-SFSSASISPG-MKVTAGLETAREARLVTVDP 225 (582)
T ss_dssp SC-EEEEEEECTT-SCEEEEEECSSCEEEEEECT
T ss_pred CC-ccccceECCC-CCEEEEccCCCeeEEEEEcC
Confidence 77 8999999995 56778888899 8999999
No 146
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.38 E-value=1.5e-11 Score=99.06 Aligned_cols=104 Identities=6% Similarity=0.127 Sum_probs=69.2
Q ss_pred EEEEecCCcEEEEECCCCC-------eE-------EEeecCCCEEEEEecCCCCCCCEEEEEe-CCCcEEEEECCCcccc
Q psy6415 2 VVAGYDNGDLKMFDLKTMS-------LK-------WETNLKNGVCGVDFDRRDIPMNKLVATT-LEAKLFVFDLKTLHRE 66 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~-------~~-------~~~~~~~~V~sv~f~~~~~~~~~l~s~s-~Dg~I~iWD~~~~~~~ 66 (174)
++++..++.|++|++.... +. ........+..++|+|++ +.|++++ .++.|++||+++....
T Consensus 170 ~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg---~~l~v~~~~~~~v~v~~~~~g~~~ 246 (361)
T 3scy_A 170 LADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDG---KFAYLINEIGGTVIAFRYADGMLD 246 (361)
T ss_dssp EEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTS---SEEEEEETTTCEEEEEEEETTEEE
T ss_pred EEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCC---CEEEEEcCCCCeEEEEEecCCceE
Confidence 3555568999999887433 21 122335678999999974 7776665 7999999999865321
Q ss_pred cceeeeeecccCcCcEEEEEEcCCCCCEEEEEcC-CCcEEEEec
Q psy6415 67 KGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGG-SGSLNLWQL 109 (174)
Q Consensus 67 ~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~-Dg~V~lWd~ 109 (174)
..........+.. ....++|+|++..++++... +++|.+|++
T Consensus 247 ~~~~~~~~~~~~~-~~~~i~~spdg~~l~v~~~~~~~~i~v~~~ 289 (361)
T 3scy_A 247 EIQTVAADTVNAQ-GSGDIHLSPDGKYLYASNRLKADGVAIFKV 289 (361)
T ss_dssp EEEEEESCSSCCC-CEEEEEECTTSSEEEEEECSSSCEEEEEEE
T ss_pred EeEEEecCCCCCC-CcccEEECCCCCEEEEECCCCCCEEEEEEE
Confidence 1111112223334 57899999965545566666 699999999
No 147
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.34 E-value=5.2e-12 Score=111.87 Aligned_cols=94 Identities=6% Similarity=-0.028 Sum_probs=70.2
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecC-C-----CEEEEEecCCCCCCCEEEEEeCC---------CcEEEEECCCcccc
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLK-N-----GVCGVDFDRRDIPMNKLVATTLE---------AKLFVFDLKTLHRE 66 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~-~-----~V~sv~f~~~~~~~~~l~s~s~D---------g~I~iWD~~~~~~~ 66 (174)
|+++ ||+|++||+.++++......+ . ...+++|||++ +.|+.++.+ +.+.|||+.+++..
T Consensus 31 ~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg---~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~ 105 (740)
T 4a5s_A 31 LYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDG---QFILLEYNYVKQWRHSYTASYDIYDLNKRQLI 105 (740)
T ss_dssp EEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTS---SEEEEEEEEEECSSSCEEEEEEEEETTTTEEC
T ss_pred EEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCC---CEEEEEECCeeeEEEccceEEEEEECCCCcEE
Confidence 5554 999999999999876554322 1 23458899974 889998877 55679999987532
Q ss_pred cceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 67 KGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 67 ~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+..|.. .+..++|||++ ..||.+ .|+.|++|++
T Consensus 106 ------~l~~~~~-~~~~~~~SPdG-~~la~~-~~~~i~~~~~ 139 (740)
T 4a5s_A 106 ------TEERIPN-NTQWVTWSPVG-HKLAYV-WNNDIYVKIE 139 (740)
T ss_dssp ------CSSCCCT-TEEEEEECSST-TCEEEE-ETTEEEEESS
T ss_pred ------EcccCCC-cceeeEECCCC-CEEEEE-ECCeEEEEEC
Confidence 2346667 89999999954 566776 4789999999
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.33 E-value=3e-11 Score=96.57 Aligned_cols=130 Identities=15% Similarity=0.153 Sum_probs=86.3
Q ss_pred EEEEecCCcEEEEECC-CCCeEEEe--e--cCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCC--cccccceeeee
Q psy6415 2 VVAGYDNGDLKMFDLK-TMSLKWET--N--LKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKT--LHREKGFAYLS 73 (174)
Q Consensus 2 lasgs~Dg~iklWDl~-~~~~~~~~--~--~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~--~~~~~~~~~~~ 73 (174)
++++..++.|++||++ ++++.... . ....+..++|+|++ +.| +++..++.|++||++. .+.. ....
T Consensus 155 ~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg---~~l~v~~~~~~~v~v~~~~~~~g~~~---~~~~ 228 (347)
T 3hfq_A 155 AVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDG---QYAFLAGELSSQIASLKYDTQTGAFT---QLGI 228 (347)
T ss_dssp EEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTS---SEEEEEETTTTEEEEEEEETTTTEEE---EEEE
T ss_pred EEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCC---CEEEEEeCCCCEEEEEEecCCCCceE---Eeee
Confidence 5677778999999998 56543321 1 23468899999974 655 4567889999999885 2211 0111
Q ss_pred ecccC------cCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccccc
Q psy6415 74 EKAHK------ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPG 147 (174)
Q Consensus 74 ~~~h~------~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~ 147 (174)
+.... . .+..++|+|++..+++++..+++|.+|+++. +|
T Consensus 229 ~~~~~~~~~~~~-~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~---------------------------~g------- 273 (347)
T 3hfq_A 229 VKTIPADYTAHN-GAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA---------------------------DG------- 273 (347)
T ss_dssp EESSCTTCCSCC-EEEEEEECTTSCEEEEEEETTTEEEEEEECG---------------------------GG-------
T ss_pred eeecCCCCCCCC-cceeEEECCCCCEEEEEeCCCCEEEEEEECC---------------------------CC-------
Confidence 11111 3 5889999996655668888899999999910 11
Q ss_pred ccceeeeeeccccceeeeeeCCCCC
Q psy6415 148 SLTLLQEATLSSQPINSLDWSADKL 172 (174)
Q Consensus 148 ~~~ll~~~~~h~~~V~~l~~spd~~ 172 (174)
+.+++..+..|...+++|+|||||+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~spdg~ 298 (347)
T 3hfq_A 274 HLTLIQQISTEGDFPRDFDLDPTEA 298 (347)
T ss_dssp CEEEEEEEECSSSCCCEEEECTTSS
T ss_pred cEEEeEEEecCCCCcCeEEECCCCC
Confidence 1234555666666677788888775
No 149
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.31 E-value=2.6e-12 Score=112.53 Aligned_cols=98 Identities=9% Similarity=0.081 Sum_probs=65.7
Q ss_pred EEEEec---------CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee
Q psy6415 2 VVAGYD---------NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL 72 (174)
Q Consensus 2 lasgs~---------Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~ 72 (174)
||+++. |++|++||+.+++..........+.+++|+|++ +.||+++ |+.|++||+.+++..+ +
T Consensus 74 la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG---~~la~~~-~~~i~~~~~~~g~~~~---l- 145 (719)
T 1z68_A 74 VYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVG---SKLAYVY-QNNIYLKQRPGDPPFQ---I- 145 (719)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSST---TCEEEEE-TTEEEEESSTTSCCEE---C-
T ss_pred EEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCC---CEEEEEE-CCeEEEEeCCCCCcEE---E-
Confidence 566665 799999999998762111223568899999975 8888886 7899999998765321 1
Q ss_pred eecccCcCcE-----------------EEEEEcCCCCCEEEEEcCC-CcEEEEec
Q psy6415 73 SEKAHKATTV-----------------WAAKHLPQNRDLFVTCGGS-GSLNLWQL 109 (174)
Q Consensus 73 ~~~~h~~~~i-----------------~~v~fsP~~~~~las~s~D-g~V~lWd~ 109 (174)
+..++.. .| .+++|||+ +..||+++.| +.+.+|.+
T Consensus 146 ~~~~~~~-~v~~g~~~~v~~ee~~~~~~~~~wSPD-G~~la~~~~d~~~~~~~~~ 198 (719)
T 1z68_A 146 TFNGREN-KIFNGIPDWVYEEEMLATKYALWWSPN-GKFLAYAEFNDTDIPVIAY 198 (719)
T ss_dssp CCCCBTT-TEEESSCCHHHHHHTTCSSCCEEECTT-SSEEEEEEEECTTSCEEEE
T ss_pred ecCCCcC-CeEcccccceeeeecccCcccEEECCC-CCEEEEEEECCCCCceEEe
Confidence 1112222 22 48999995 5678888765 44444433
No 150
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.31 E-value=3e-11 Score=95.89 Aligned_cols=94 Identities=10% Similarity=0.069 Sum_probs=69.5
Q ss_pred CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCE-EEEEeCCCcEEEEECCCcccccceeeeeecccCcC------
Q psy6415 8 NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNK-LVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT------ 80 (174)
Q Consensus 8 Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~-l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~------ 80 (174)
+++|.+||+.+++..........+.+++|+|++ +. ++++..++.|.+||+++.+....+ ..+...
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg---~~l~v~~~~~~~v~~~d~~~~~~~~~~-----~~~~~~~~~~~~ 139 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLKPFGATINNTT---QTLWFGNTVNSAVTAIDAKTGEVKGRL-----VLDDRKRTEEVR 139 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSEEEETTT---TEEEEEETTTTEEEEEETTTCCEEEEE-----ESCCCCCCSSCC
T ss_pred CccEEEEcCCCCeEEEEEecCCCcceEEECCCC---CEEEEEecCCCEEEEEeCCCCeeEEEE-----ecCCCccccccC
Confidence 678999999999887776656668889999974 64 456677899999999987643222 222110
Q ss_pred --cEEEEEEcCCCCCEEEEE-cCCCcEEEEec
Q psy6415 81 --TVWAAKHLPQNRDLFVTC-GGSGSLNLWQL 109 (174)
Q Consensus 81 --~i~~v~fsP~~~~~las~-s~Dg~V~lWd~ 109 (174)
.+..++|+|++..+++++ +.++.|.+||.
T Consensus 140 ~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~ 171 (353)
T 3vgz_A 140 PLQPRELVADDATNTVYISGIGKESVIWVVDG 171 (353)
T ss_dssp CCEEEEEEEETTTTEEEEEEESSSCEEEEEET
T ss_pred CCCCceEEECCCCCEEEEEecCCCceEEEEcC
Confidence 268899999766566655 46899999999
No 151
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.31 E-value=2.9e-11 Score=95.97 Aligned_cols=99 Identities=11% Similarity=0.072 Sum_probs=75.8
Q ss_pred ecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415 6 YDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWA 84 (174)
Q Consensus 6 s~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~ 84 (174)
+.++.|.+||+++++...... ....+.+++|+|++ +.|++++.++.|.+||+++.+....+.. ...++.. .+..
T Consensus 161 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg---~~l~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~-~~~~ 235 (353)
T 3vgz_A 161 GKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEG---KRLYTTNADGELITIDTADNKILSRKKL-LDDGKEH-FFIN 235 (353)
T ss_dssp SSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTT---TEEEEECTTSEEEEEETTTTEEEEEEEC-CCSSSCC-CEEE
T ss_pred CCCceEEEEcCCCCceEEEecCCCCccceEEECCCC---CEEEEEcCCCeEEEEECCCCeEEEEEEc-CCCCCCc-ccce
Confidence 358999999999998877665 44558889999974 8899999999999999998754322211 0112445 6889
Q ss_pred EEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 85 AKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 85 v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
++|+|++..++++...++.|.+||.
T Consensus 236 ~~~s~dg~~l~~~~~~~~~v~~~d~ 260 (353)
T 3vgz_A 236 ISLDTARQRAFITDSKAAEVLVVDT 260 (353)
T ss_dssp EEEETTTTEEEEEESSSSEEEEEET
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEC
Confidence 9999976667777777899999999
No 152
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.30 E-value=2.5e-11 Score=111.20 Aligned_cols=122 Identities=11% Similarity=-0.015 Sum_probs=95.3
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecCC-CEEEEEecCCCCCCCEEEEEeCCCcEE-EEECCCcccccceeeeeecccCc
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLKN-GVCGVDFDRRDIPMNKLVATTLEAKLF-VFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~~-~V~sv~f~~~~~~~~~l~s~s~Dg~I~-iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
||+++ ++.|.+||+.++.......+.. .+..++|+ ++ ..|++++.++.|. +||+.+.+. ..+..|..
T Consensus 311 la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg---~~l~~~s~~~~l~~~~d~~~~~~------~~l~~~~~ 379 (1045)
T 1k32_A 311 IAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TK---VAFIHGTREGDFLGIYDYRTGKA------EKFEENLG 379 (1045)
T ss_dssp EEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SE---EEEEEEETTEEEEEEEETTTCCE------EECCCCCC
T ss_pred EEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CC---CeEEEEECCCceEEEEECCCCCc------eEecCCcc
Confidence 56666 7899999999887655444555 78999999 64 7899999888898 999987542 12236667
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS 159 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~ 159 (174)
.+..++|+| ++..||+++.|+.|++||++ . +++...+.+|.
T Consensus 380 -~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~----------------------------t---------g~~~~~~~~~~ 420 (1045)
T 1k32_A 380 -NVFAMGVDR-NGKFAVVANDRFEIMTVDLE----------------------------T---------GKPTVIERSRE 420 (1045)
T ss_dssp -SEEEEEECT-TSSEEEEEETTSEEEEEETT----------------------------T---------CCEEEEEECSS
T ss_pred -ceeeeEECC-CCCEEEEECCCCeEEEEECC----------------------------C---------CceEEeccCCC
Confidence 899999999 56788999999999999991 2 23445556889
Q ss_pred cceeeeeeCCCCCC
Q psy6415 160 QPINSLDWSADKLG 173 (174)
Q Consensus 160 ~~V~~l~~spd~~~ 173 (174)
.+|.+++|||||+-
T Consensus 421 ~~v~~~~~SpDG~~ 434 (1045)
T 1k32_A 421 AMITDFTISDNSRF 434 (1045)
T ss_dssp SCCCCEEECTTSCE
T ss_pred CCccceEECCCCCe
Confidence 99999999999974
No 153
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.29 E-value=1e-11 Score=108.37 Aligned_cols=83 Identities=10% Similarity=0.093 Sum_probs=60.0
Q ss_pred cCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCC-----cccccceeeeeecccCc--
Q psy6415 7 DNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKT-----LHREKGFAYLSEKAHKA-- 79 (174)
Q Consensus 7 ~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~-----~~~~~~~~~~~~~~h~~-- 79 (174)
.|++|++||+.+++......+...+.+++|+|++ +.|+++ .|+.|++||+.+ .+..+. + ..+..
T Consensus 99 ~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG---~~la~~-~~~~i~v~~~~~~~~~~g~~~~~----~-~~~~~~~ 169 (706)
T 2z3z_A 99 TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVG---DRVAYV-RNHNLYIARGGKLGEGMSRAIAV----T-IDGTETL 169 (706)
T ss_dssp ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTS---SEEEEE-ETTEEEEEECBCTTSCCCCCEES----C-SCCBTTE
T ss_pred ECCEEEEEECCCCceEEccCCcccccCCcCCCCC---CEEEEE-ECCeEEEEecCcccccCCCcEEe----c-cCCCCCe
Confidence 4699999999998876655566678889999974 788884 689999999987 543211 1 11212
Q ss_pred -----------CcEEEEEEcCCCCCEEEEEc
Q psy6415 80 -----------TTVWAAKHLPQNRDLFVTCG 99 (174)
Q Consensus 80 -----------~~i~~v~fsP~~~~~las~s 99 (174)
..+.+++|||+ +..||+++
T Consensus 170 ~~g~~~~~ee~~~~~~~~~SpD-g~~la~~~ 199 (706)
T 2z3z_A 170 VYGQAVHQREFGIEKGTFWSPK-GSCLAFYR 199 (706)
T ss_dssp EESSCCGGGCTTCCCSEEECTT-SSEEEEEE
T ss_pred EcccchhhhhcCCCceEEECCC-CCEEEEEE
Confidence 01478999995 56778776
No 154
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.29 E-value=7.5e-11 Score=94.26 Aligned_cols=95 Identities=12% Similarity=0.094 Sum_probs=68.0
Q ss_pred CCcEEEEECCCCCeEEE---eecCCCEEEEEecCCCCCCCEEEEEe-CCCcEEEEECCCcccccceeeeeecc-------
Q psy6415 8 NGDLKMFDLKTMSLKWE---TNLKNGVCGVDFDRRDIPMNKLVATT-LEAKLFVFDLKTLHREKGFAYLSEKA------- 76 (174)
Q Consensus 8 Dg~iklWDl~~~~~~~~---~~~~~~V~sv~f~~~~~~~~~l~s~s-~Dg~I~iWD~~~~~~~~~~~~~~~~~------- 76 (174)
++.|++||+.++..... ..+...+..|+|+|++ +.|++++ .+++|++||+....... .+..+..
T Consensus 62 ~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg---~~l~~~~~~~~~v~v~~~~~~g~~~--~~~~~~~~~~~p~~ 136 (347)
T 3hfq_A 62 EGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEAR---QLVYSANYHKGTAEVMKIAADGALT--LTDTVQHSGHGPRP 136 (347)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTT---TEEEEEETTTTEEEEEEECTTSCEE--EEEEEECCCCCSST
T ss_pred CceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCC---CEEEEEeCCCCEEEEEEeCCCCCee--ecceeecCCCCCCc
Confidence 68999999987764322 2345678899999974 7787777 78999999996321111 1111111
Q ss_pred --cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 77 --HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 77 --h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
+.. .+.+++|+|++. +++++..+++|++|++
T Consensus 137 ~~~~~-~~~~~~~spdg~-l~v~~~~~~~v~~~~~ 169 (347)
T 3hfq_A 137 EQDGS-HIHYTDLTPDNR-LAVIDLGSDKVYVYNV 169 (347)
T ss_dssp TCSSC-CEEEEEECTTSC-EEEEETTTTEEEEEEE
T ss_pred cccCC-CceEEEECCCCc-EEEEeCCCCEEEEEEE
Confidence 122 488999999665 9999999999999999
No 155
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.28 E-value=1.3e-11 Score=107.85 Aligned_cols=97 Identities=7% Similarity=0.004 Sum_probs=66.4
Q ss_pred EEEEecC---------CcEEEEECCCCCeEEEee---cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccce
Q psy6415 2 VVAGYDN---------GDLKMFDLKTMSLKWETN---LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGF 69 (174)
Q Consensus 2 lasgs~D---------g~iklWDl~~~~~~~~~~---~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~ 69 (174)
||+++.+ +.|.+||+.+++...... +...+.+++|+|++ +.||+++. +.|++||+.+++..+.
T Consensus 75 l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG---~~la~~~~-~~i~~~~~~~g~~~~~- 149 (723)
T 1xfd_A 75 ALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKG---QQLIFIFE-NNIYYCAHVGKQAIRV- 149 (723)
T ss_dssp EEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSST---TCEEEEET-TEEEEESSSSSCCEEE-
T ss_pred EEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCC---CEEEEEEC-CeEEEEECCCCceEEE-
Confidence 6677664 788899999987633222 22348889999974 88998886 7999999988654211
Q ss_pred eeeeecccCcCc------------------EEEEEEcCCCCCEEEEEcCC-CcEEEEec
Q psy6415 70 AYLSEKAHKATT------------------VWAAKHLPQNRDLFVTCGGS-GSLNLWQL 109 (174)
Q Consensus 70 ~~~~~~~h~~~~------------------i~~v~fsP~~~~~las~s~D-g~V~lWd~ 109 (174)
...+.. . +.+++|||+ +..||+++.| +.+++|++
T Consensus 150 ----~~~~~~-~~~~~g~~~~v~~ee~~~~~~~~~~SpD-g~~la~~~~~~~~~~~~~~ 202 (723)
T 1xfd_A 150 ----VSTGKE-GVIYNGLSDWLYEEEILKTHIAHWWSPD-GTRLAYAAINDSRVPIMEL 202 (723)
T ss_dssp ----ECCCBT-TTEEEEECCHHHHHTTSSSSEEEEECTT-SSEEEEEEEECTTSCEEEE
T ss_pred ----ecCCCC-CceECcccceeEEEEeccCcceEEECCC-CCEEEEEEECCCccceEEe
Confidence 112222 2 278999995 5667777654 46777776
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.24 E-value=2.2e-11 Score=104.39 Aligned_cols=97 Identities=11% Similarity=0.002 Sum_probs=78.6
Q ss_pred EEEEecC----CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCC--cEEEEECCCcccccceeeeeec
Q psy6415 2 VVAGYDN----GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEA--KLFVFDLKTLHREKGFAYLSEK 75 (174)
Q Consensus 2 lasgs~D----g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg--~I~iWD~~~~~~~~~~~~~~~~ 75 (174)
||+++.| +.|++||+.+++......+...+.+++|+|++ +.|++++.++ .|++||+.+++.. .+.
T Consensus 164 la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG---~~l~~~~~~~~~~i~~~d~~~~~~~------~~~ 234 (582)
T 3o4h_A 164 IAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGM---KVTAGLETAREARLVTVDPRDGSVE------DLE 234 (582)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTS---CEEEEEECSSCEEEEEECTTTCCEE------ECC
T ss_pred EEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCC---CEEEEccCCCeeEEEEEcCCCCcEE------Ecc
Confidence 6767776 78999999998876555566778999999975 8899888899 8999999886532 234
Q ss_pred ccCcCcEEEEE--------EcCCCCCEEEEEcCCCcEEEEec
Q psy6415 76 AHKATTVWAAK--------HLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 76 ~h~~~~i~~v~--------fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.|.. .+..++ |+|++ .++++++.||+++||++
T Consensus 235 ~~~~-~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 235 LPSK-DFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID 274 (582)
T ss_dssp CSCS-HHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET
T ss_pred CCCc-ChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE
Confidence 5655 666666 99966 89999999999999998
No 157
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.24 E-value=4.8e-11 Score=104.15 Aligned_cols=96 Identities=14% Similarity=0.201 Sum_probs=68.4
Q ss_pred cCCcEEEEECCCCCeEEEe---ecCCCEEEEEecCCCCCCCEEEEEeCCC-----cEEEEECCCcccccceeeeeecccC
Q psy6415 7 DNGDLKMFDLKTMSLKWET---NLKNGVCGVDFDRRDIPMNKLVATTLEA-----KLFVFDLKTLHREKGFAYLSEKAHK 78 (174)
Q Consensus 7 ~Dg~iklWDl~~~~~~~~~---~~~~~V~sv~f~~~~~~~~~l~s~s~Dg-----~I~iWD~~~~~~~~~~~~~~~~~h~ 78 (174)
.+.+|++||+++++..... .+...+.+++|+|++ +.|++++.|+ .|++||+++++..... .. ..+.
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg---~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~-~~~~ 306 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDE---NILYVAEVNRAQNECKVNAYDAETGRFVRTL--FV-ETDK 306 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTS---SEEEEEEECTTSCEEEEEEEETTTCCEEEEE--EE-EECS
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCC---CEEEEEEeCCCCCeeEEEEEECCCCceeeEE--EE-ccCC
Confidence 4578999999998765433 234568999999974 8888887775 9999999986322111 11 1122
Q ss_pred c--CcEEEEEEcC--CCCCEEEEEcCCCcEEEEec
Q psy6415 79 A--TTVWAAKHLP--QNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 79 ~--~~i~~v~fsP--~~~~~las~s~Dg~V~lWd~ 109 (174)
. ..+.+++|+| ++ .++++++.||.++||++
T Consensus 307 ~~~~~~~~~~~sp~~dg-~~l~~~~~~g~~~l~~~ 340 (706)
T 2z3z_A 307 HYVEPLHPLTFLPGSNN-QFIWQSRRDGWNHLYLY 340 (706)
T ss_dssp SCCCCCSCCEECTTCSS-EEEEEECTTSSCEEEEE
T ss_pred CeECccCCceeecCCCC-EEEEEEccCCccEEEEE
Confidence 1 0246789999 65 48899999999999998
No 158
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.23 E-value=1e-10 Score=91.95 Aligned_cols=95 Identities=16% Similarity=0.149 Sum_probs=69.6
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecCC------CEEEEEecCCCCCCCEEEEEe------------CCCcEEEEECCCc
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLKN------GVCGVDFDRRDIPMNKLVATT------------LEAKLFVFDLKTL 63 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~~------~V~sv~f~~~~~~~~~l~s~s------------~Dg~I~iWD~~~~ 63 (174)
+++++.++.|.+||+.+++......... .+.+++|+|++ +.|++++ .++.|++||+.+.
T Consensus 49 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg---~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~ 125 (337)
T 1pby_B 49 YATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDG---KTLAIYESPVRLELTHFEVQPTRVALYDAETL 125 (337)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTS---SEEEEEEEEEEECSSCEEECCCEEEEEETTTT
T ss_pred EEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCC---CEEEEEecccccccccccccCceEEEEECCCC
Confidence 4667778999999999998765544322 57789999974 7888775 6899999999876
Q ss_pred ccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 64 HREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 64 ~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
+... .+.. .. .+..++|+|++..+ +++ ++.|++||+
T Consensus 126 ~~~~-----~~~~-~~-~~~~~~~s~dg~~l-~~~--~~~i~~~d~ 161 (337)
T 1pby_B 126 SRRK-----AFEA-PR-QITMLAWARDGSKL-YGL--GRDLHVMDP 161 (337)
T ss_dssp EEEE-----EEEC-CS-SCCCEEECTTSSCE-EEE--SSSEEEEET
T ss_pred cEEE-----EEeC-CC-CcceeEECCCCCEE-EEe--CCeEEEEEC
Confidence 5332 2222 33 57789999965544 445 689999999
No 159
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.19 E-value=8.1e-11 Score=103.15 Aligned_cols=89 Identities=13% Similarity=0.093 Sum_probs=62.7
Q ss_pred EEEEecCCcEEEEECCCC---CeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415 2 VVAGYDNGDLKMFDLKTM---SLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK 78 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~---~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~ 78 (174)
|++++. ++|++||+.++ .......+...+..++|+|++ +.|++++. +.|++||+.+.+.... ...+.
T Consensus 123 l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG---~~la~~~~-~~i~~~d~~~g~~~~~-----~~~~~ 192 (741)
T 2ecf_A 123 LLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKG---GFVSFIRG-RNLWVIDLASGRQMQL-----TADGS 192 (741)
T ss_dssp EEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTS---SEEEEEET-TEEEEEETTTTEEEEC-----CCCCC
T ss_pred EEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCC---CEEEEEeC-CcEEEEecCCCCEEEe-----ccCCc
Confidence 566665 99999999988 654444456779999999974 88888874 6999999988643211 11222
Q ss_pred cCc----------------EEEEEEcCCCCCEEEEEcCCC
Q psy6415 79 ATT----------------VWAAKHLPQNRDLFVTCGGSG 102 (174)
Q Consensus 79 ~~~----------------i~~v~fsP~~~~~las~s~Dg 102 (174)
. . +.+++|||+ +..||+++.|+
T Consensus 193 ~-~~~~g~~~~v~~~~~~~~~~~~~SpD-g~~l~~~~~d~ 230 (741)
T 2ecf_A 193 T-TIGNGIAEFVADEEMDRHTGYWWAPD-DSAIAYARIDE 230 (741)
T ss_dssp S-SEEESCCCHHHHHHSCCCCSEEECTT-SSCEEEEEEEC
T ss_pred c-ceeccccceeeeeccccccceEECCC-CCEEEEEEEcC
Confidence 1 1 477999995 45667776665
No 160
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.16 E-value=7e-10 Score=89.16 Aligned_cols=103 Identities=11% Similarity=0.070 Sum_probs=65.6
Q ss_pred EEEEecCCcEEEEECCCCCeE----EEeec-----------CCCEEEEEecCCCCCCCEEEE-EeCCCcEEEEECCCccc
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLK----WETNL-----------KNGVCGVDFDRRDIPMNKLVA-TTLEAKLFVFDLKTLHR 65 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~----~~~~~-----------~~~V~sv~f~~~~~~~~~l~s-~s~Dg~I~iWD~~~~~~ 65 (174)
+++...+++|.+||+...... ....+ ...+.+++|+|++ +.|++ ...++.|++|++.....
T Consensus 113 ~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg---~~l~~~~~~~~~v~v~~~~~~~~ 189 (361)
T 3scy_A 113 VTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDG---KYLLADDLGTDQIHKFNINPNAN 189 (361)
T ss_dssp EEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTS---SEEEEEETTTTEEEEEEECTTCC
T ss_pred EEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCC---CEEEEEeCCCCEEEEEEEcCCCC
Confidence 344557899999999754321 11111 1235889999974 65654 45689999999876431
Q ss_pred ------ccce---eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 66 ------EKGF---AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 66 ------~~~~---~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.... ..... .+.. ....++|+|++..+++++..+++|.+||+
T Consensus 190 ~~~~~~l~~~~~~~~~~~-~~~~-~~~~~~~spdg~~l~v~~~~~~~v~v~~~ 240 (361)
T 3scy_A 190 ADNKEKFLTKGTPEAFKV-APGS-GPRHLIFNSDGKFAYLINEIGGTVIAFRY 240 (361)
T ss_dssp TTTCCCCEEEEEEEEEEC-CTTC-CEEEEEECTTSSEEEEEETTTCEEEEEEE
T ss_pred cccccceeecccccceec-CCCC-CCeEEEEcCCCCEEEEEcCCCCeEEEEEe
Confidence 1000 01111 2334 67899999965545566667999999999
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.14 E-value=1.9e-09 Score=87.41 Aligned_cols=96 Identities=16% Similarity=0.134 Sum_probs=66.1
Q ss_pred cCCcEEEEECC-CCCeEEEee-----cCCCEEEEEecCCCCCCCEEEEEe-CCCcEEEEECC-Ccccccceeeeeec--c
Q psy6415 7 DNGDLKMFDLK-TMSLKWETN-----LKNGVCGVDFDRRDIPMNKLVATT-LEAKLFVFDLK-TLHREKGFAYLSEK--A 76 (174)
Q Consensus 7 ~Dg~iklWDl~-~~~~~~~~~-----~~~~V~sv~f~~~~~~~~~l~s~s-~Dg~I~iWD~~-~~~~~~~~~~~~~~--~ 76 (174)
.+|++++|+++ .+++..... +...+.+++|+|++ +.|+++. .++.|++||+. +++.. ....+. .
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG---~~l~~~~~~~~~v~~~~~~~~g~~~---~~~~~~~~~ 190 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTE---TYLYSADLTANKLWTHRKLASGEVE---LVGSVDAPD 190 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTS---SEEEEEETTTTEEEEEEECTTSCEE---EEEEEECSS
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCC---CEEEEEcCCCCEEEEEEECCCCCEE---EeeeEecCC
Confidence 68999999997 465543222 34579999999974 7777665 47899999998 54321 111222 2
Q ss_pred cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
|.. .+..++|+|++..++++...+++|.+|++
T Consensus 191 ~g~-~p~~~~~spdg~~l~v~~~~~~~v~v~~~ 222 (365)
T 1jof_A 191 PGD-HPRWVAMHPTGNYLYALMEAGNRICEYVI 222 (365)
T ss_dssp TTC-CEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCC-CCCEeEECCCCCEEEEEECCCCeEEEEEE
Confidence 345 68999999965444444455889999998
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.12 E-value=3.1e-10 Score=92.07 Aligned_cols=101 Identities=14% Similarity=0.086 Sum_probs=65.9
Q ss_pred EEEEecCCcEEEEECC-CCCeEEEeec--CCCEEEEEecCCCCCCCE--EEEEe-------------CCCcEEEEECCC-
Q psy6415 2 VVAGYDNGDLKMFDLK-TMSLKWETNL--KNGVCGVDFDRRDIPMNK--LVATT-------------LEAKLFVFDLKT- 62 (174)
Q Consensus 2 lasgs~Dg~iklWDl~-~~~~~~~~~~--~~~V~sv~f~~~~~~~~~--l~s~s-------------~Dg~I~iWD~~~- 62 (174)
|++++.+ +|.+||+. ++++.....+ ...++.++|+|++ +. +++++ .++++++|++..
T Consensus 54 l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg---~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~ 129 (365)
T 1jof_A 54 IYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNT---RAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSET 129 (365)
T ss_dssp EEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCC---EEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTT
T ss_pred EEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCC---CEEEEEEecCCcceeccceeecCCceEEEEccCCC
Confidence 6677777 99999997 7766433222 1335668999974 63 44553 699999999974
Q ss_pred cccccceeeeeec-ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 63 LHREKGFAYLSEK-AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 63 ~~~~~~~~~~~~~-~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
++.... +..+. .+.. .+.+++|+|++..++++...+++|++||+
T Consensus 130 g~~~~~--~~~~~~~~~~-~~~~~~~spdG~~l~~~~~~~~~v~~~~~ 174 (365)
T 1jof_A 130 GKLEKN--VQNYEYQENT-GIHGMVFDPTETYLYSADLTANKLWTHRK 174 (365)
T ss_dssp CCEEEE--EEEEECCTTC-CEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CcCcce--EeeEEeCCCC-cceEEEECCCCCEEEEEcCCCCEEEEEEE
Confidence 332111 11111 2344 78999999965445444556789999999
No 163
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.07 E-value=1.7e-09 Score=89.97 Aligned_cols=89 Identities=18% Similarity=0.134 Sum_probs=69.1
Q ss_pred EEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
|+++ .++.|++||+++...... ..+...|.++.+.+ ..+++++.||+|.+||+.+.... .+..
T Consensus 100 L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~-----p~~av~~~dG~L~v~dl~~~~~~---------~~~~- 163 (388)
T 1xip_A 100 VLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVN-----NTLVILNSVNDLSALDLRTKSTK---------QLAQ- 163 (388)
T ss_dssp EEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECS-----SEEEEEETTSEEEEEETTTCCEE---------EEEE-
T ss_pred EEEE-cCCcEEEEEchhhhccCccceeecceeeEEecC-----CCEEEEECCCCEEEEEccCCccc---------cccC-
Confidence 5666 889999999987654332 34567788888776 34999999999999999875421 1334
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.|.+++|||++ ++.|..||+|++|+.
T Consensus 164 ~Vs~v~WSpkG---~~vg~~dg~i~~~~~ 189 (388)
T 1xip_A 164 NVTSFDVTNSQ---LAVLLKDRSFQSFAW 189 (388)
T ss_dssp SEEEEEECSSE---EEEEETTSCEEEEEE
T ss_pred CceEEEEcCCc---eEEEEcCCcEEEEcC
Confidence 79999999954 577999999999988
No 164
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.04 E-value=1.5e-09 Score=85.80 Aligned_cols=99 Identities=18% Similarity=0.212 Sum_probs=69.3
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecCC-------CEEEEEecCCCCCCCEEEEEeCC------------CcEEEEECCC
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLKN-------GVCGVDFDRRDIPMNKLVATTLE------------AKLFVFDLKT 62 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~~-------~V~sv~f~~~~~~~~~l~s~s~D------------g~I~iWD~~~ 62 (174)
++++..++.|.+||+++++......... .+..++|+|++ +.|++++.+ +.|.+||+++
T Consensus 58 ~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg---~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 134 (349)
T 1jmx_B 58 YVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDG---KEVYATVNPTQRLNDHYVVKPPRLEVFSTAD 134 (349)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTS---SEEEEEEEEEEECSSCEEECCCEEEEEEGGG
T ss_pred EEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCC---CEEEEEcccccccccccccCCCeEEEEECCC
Confidence 3566778999999999988765544322 27789999974 788888765 9999999987
Q ss_pred cccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415 63 LHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS 111 (174)
Q Consensus 63 ~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~ 111 (174)
.+.... .... .+.. .+.+++|+|++. +++ ++. .|++||+++
T Consensus 135 ~~~~~~--~~~~-~~~~-~~~~~~~s~dg~-l~~-~~~--~i~~~d~~~ 175 (349)
T 1jmx_B 135 GLEAKP--VRTF-PMPR-QVYLMRAADDGS-LYV-AGP--DIYKMDVKT 175 (349)
T ss_dssp GGGBCC--SEEE-ECCS-SCCCEEECTTSC-EEE-ESS--SEEEECTTT
T ss_pred ccccce--eeec-cCCC-cccceeECCCCc-EEE-ccC--cEEEEeCCC
Confidence 543221 1122 2334 688999999655 666 444 499999943
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.01 E-value=1.4e-09 Score=94.22 Aligned_cols=97 Identities=11% Similarity=-0.108 Sum_probs=65.6
Q ss_pred EEEEec-CCcEEEEECC--C-CCeEEEee-----cCCCEEEEEecCCCCCCCEEEEEeCC----------CcEEEEECCC
Q psy6415 2 VVAGYD-NGDLKMFDLK--T-MSLKWETN-----LKNGVCGVDFDRRDIPMNKLVATTLE----------AKLFVFDLKT 62 (174)
Q Consensus 2 lasgs~-Dg~iklWDl~--~-~~~~~~~~-----~~~~V~sv~f~~~~~~~~~l~s~s~D----------g~I~iWD~~~ 62 (174)
||..+. +..|.+||+. + +....... +...+.+++|+|++ +.|++++.| ..|++||+.+
T Consensus 94 la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg---~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 170 (662)
T 3azo_A 94 LVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPER---GEVWCMAEEFTGEGPSDVRRFLAAVPLDG 170 (662)
T ss_dssp EEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTT---TEEEEEEEEECSSSTTCEEEEEEEEETTS
T ss_pred EEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCC---CEEEEEEecccCCCCCCceeEEEEEECCC
Confidence 444433 5667777776 3 54433222 33458899999975 889988877 6899999987
Q ss_pred ------cccccceeeeeec-ccCcCcEEEEEEcCCCCCEEEEEcCC--------CcEEEEec
Q psy6415 63 ------LHREKGFAYLSEK-AHKATTVWAAKHLPQNRDLFVTCGGS--------GSLNLWQL 109 (174)
Q Consensus 63 ------~~~~~~~~~~~~~-~h~~~~i~~v~fsP~~~~~las~s~D--------g~V~lWd~ 109 (174)
.+. ..+. .+.. .+..++|||+ +..||.++.+ ..|++||+
T Consensus 171 ~~~~~~~~~------~~l~~~~~~-~~~~~~~SpD-G~~la~~~~~~~~~~~~~~~i~~~d~ 224 (662)
T 3azo_A 171 SAAADRSAV------RELSDDAHR-FVTGPRLSPD-GRQAVWLAWDHPRMPWEGTELKTARV 224 (662)
T ss_dssp TTTTCGGGS------EESSCSCSS-EECCCEECTT-SSEEEEEEECTTCCTTTCEEEEEEEE
T ss_pred CccccCCce------eEEEecCCC-cccCceECCC-CCEEEEEECCCCCCCCCCcEEEEEEE
Confidence 432 1223 4445 7888999995 5667766655 37999999
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.99 E-value=2.2e-09 Score=94.96 Aligned_cols=98 Identities=14% Similarity=0.174 Sum_probs=68.9
Q ss_pred EEEEecC---------CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee
Q psy6415 2 VVAGYDN---------GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL 72 (174)
Q Consensus 2 lasgs~D---------g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~ 72 (174)
|+.++.+ +.+.+||+.++++.....+...+..++|||++ +.||.++ |+.|++||+.+++..+ .
T Consensus 76 l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG---~~la~~~-~~~i~~~~~~~~~~~~----l 147 (740)
T 4a5s_A 76 ILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVG---HKLAYVW-NNDIYVKIEPNLPSYR----I 147 (740)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSST---TCEEEEE-TTEEEEESSTTSCCEE----C
T ss_pred EEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCC---CEEEEEE-CCeEEEEECCCCceEE----E
Confidence 5666665 56679999999876544456779999999985 8888885 6899999998765321 1
Q ss_pred eecccCcCcE-----------------EEEEEcCCCCCEEEEEcCCCc-EEEEec
Q psy6415 73 SEKAHKATTV-----------------WAAKHLPQNRDLFVTCGGSGS-LNLWQL 109 (174)
Q Consensus 73 ~~~~h~~~~i-----------------~~v~fsP~~~~~las~s~Dg~-V~lWd~ 109 (174)
+..++.. .+ ..++|||+ +..||.++.|.+ |++|++
T Consensus 148 t~~g~~~-~~~~g~~~~v~~ee~~~~~~~~~wSpD-g~~la~~~~d~~~v~~~~~ 200 (740)
T 4a5s_A 148 TWTGKED-IIYNGITDWVYEEEVFSAYSALWWSPN-GTFLAYAQFNDTEVPLIEY 200 (740)
T ss_dssp CSCCBTT-TEEESBCCHHHHHHTSSSSBCEEECTT-SSEEEEEEEECTTCCEEEE
T ss_pred cCCCCcc-ceecCcccccccchhcCCCcceEECCC-CCEEEEEEEcccCCceEEE
Confidence 1122222 22 24899995 567788776655 999988
No 167
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.96 E-value=3.1e-09 Score=88.42 Aligned_cols=92 Identities=20% Similarity=0.335 Sum_probs=66.5
Q ss_pred CEEEEecCCcEEEEECCCCC-----------eEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccce
Q psy6415 1 MVVAGYDNGDLKMFDLKTMS-----------LKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGF 69 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~-----------~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~ 69 (174)
++++|+.| .+++|+++... ......+.. |+.|+| + ++.|+++ .++.|++||+++....
T Consensus 51 ll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d---~~~L~v~-~~~~l~v~dv~sl~~~--- 119 (388)
T 1xip_A 51 LFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--H---GDQVLVS-TRNALYSLDLEELSEF--- 119 (388)
T ss_dssp EEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--E---TTEEEEE-ESSEEEEEESSSTTCE---
T ss_pred EEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--C---CCEEEEE-cCCcEEEEEchhhhcc---
Confidence 36777776 56679865332 112334456 999999 4 3888888 8899999999886522
Q ss_pred eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 70 AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 70 ~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.....|+. .+.++.+.+. . ||.++.||+|.+||+
T Consensus 120 --~~~~~~~~-~v~~i~~~~p--~-~av~~~dG~L~v~dl 153 (388)
T 1xip_A 120 --RTVTSFEK-PVFQLKNVNN--T-LVILNSVNDLSALDL 153 (388)
T ss_dssp --EEEEECSS-CEEEEEECSS--E-EEEEETTSEEEEEET
T ss_pred --Cccceeec-ceeeEEecCC--C-EEEEECCCCEEEEEc
Confidence 12346667 8889888763 2 888999999999999
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.92 E-value=6e-09 Score=90.23 Aligned_cols=101 Identities=14% Similarity=0.084 Sum_probs=70.1
Q ss_pred EEEEecC----------CcEEEEECCC------CCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCC--------CcEE
Q psy6415 2 VVAGYDN----------GDLKMFDLKT------MSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLE--------AKLF 56 (174)
Q Consensus 2 lasgs~D----------g~iklWDl~~------~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~D--------g~I~ 56 (174)
|++++.| .+|++||+.+ +...... .+...+.+++|+|++ +.|+.++.+ ..|+
T Consensus 144 l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG---~~la~~~~~~~~~~~~~~~i~ 220 (662)
T 3azo_A 144 VWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDG---RQAVWLAWDHPRMPWEGTELK 220 (662)
T ss_dssp EEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTS---SEEEEEEECTTCCTTTCEEEE
T ss_pred EEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCC---CEEEEEECCCCCCCCCCcEEE
Confidence 5666666 5899999988 6654444 445567889999974 889877754 4799
Q ss_pred EEECC-CcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 57 VFDLK-TLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 57 iWD~~-~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
+||+. ++.... .......|.. .+.+++|+|++. ++++++.||..+||.+
T Consensus 221 ~~d~~~~g~~~~--~~~l~~~~~~-~~~~~~~spdg~-l~~~~~~~~~~~l~~~ 270 (662)
T 3azo_A 221 TARVTEDGRFAD--TRTLLGGPEE-AIAQAEWAPDGS-LIVATDRTGWWNLHRV 270 (662)
T ss_dssp EEEECTTSCEEE--EEEEEEETTB-CEEEEEECTTSC-EEEEECTTSSCEEEEE
T ss_pred EEEECCCCcccc--cEEeCCCCCc-eEcceEECCCCe-EEEEECCCCCeEEEEE
Confidence 99998 441000 0111224456 899999999655 8889999996566555
No 169
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.91 E-value=1.9e-08 Score=79.36 Aligned_cols=96 Identities=15% Similarity=0.183 Sum_probs=72.4
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEeecC--CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc-
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETNLK--NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH- 77 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~--~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h- 77 (174)
+|++++.|+.|.+||.++|+.++..... ..++++++.|++ +.|+ +.++.|+.||. +++.+ ..+..+
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG---~ilv--s~~~~V~~~d~-~G~~~-----W~~~~~~ 75 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAG---EILF--SYSKGAKMITR-DGREL-----WNIAAPA 75 (276)
T ss_dssp EEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTS---CEEE--ECBSEEEEECT-TSCEE-----EEEECCT
T ss_pred EEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCC---CEEE--eCCCCEEEECC-CCCEE-----EEEcCCC
Confidence 4789999999999999999998887644 368999999974 7777 46888999998 55432 233333
Q ss_pred CcCcEEEEEEcCCCCCEEEEEcC-CCcEEEEec
Q psy6415 78 KATTVWAAKHLPQNRDLFVTCGG-SGSLNLWQL 109 (174)
Q Consensus 78 ~~~~i~~v~fsP~~~~~las~s~-Dg~V~lWd~ 109 (174)
.. .+.++++.|+ +.++++.+. +++|..+|.
T Consensus 76 ~~-~~~~~~~~~d-G~~lv~~~~~~~~v~~vd~ 106 (276)
T 3no2_A 76 GC-EMQTARILPD-GNALVAWCGHPSTILEVNM 106 (276)
T ss_dssp TC-EEEEEEECTT-SCEEEEEESTTEEEEEECT
T ss_pred Cc-cccccEECCC-CCEEEEecCCCCEEEEEeC
Confidence 34 7899999994 567777766 777766665
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.89 E-value=6e-08 Score=75.29 Aligned_cols=96 Identities=8% Similarity=0.059 Sum_probs=68.8
Q ss_pred EEEEecCCcEEEEECCCCCeEEEee---cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec--c
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETN---LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK--A 76 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~---~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~--~ 76 (174)
+++...++.|.+||.. ++...... ....+++|+++|++ +.+++.+.++.|++||..... +..+. +
T Consensus 135 ~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g---~l~v~~~~~~~i~~~~~~g~~------~~~~~~~g 204 (286)
T 1q7f_A 135 IVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQ---EIFISDNRAHCVKVFNYEGQY------LRQIGGEG 204 (286)
T ss_dssp EEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSS---EEEEEEGGGTEEEEEETTCCE------EEEESCTT
T ss_pred EEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCC---CEEEEECCCCEEEEEcCCCCE------EEEEccCC
Confidence 4566678899999975 44443332 23468999999964 677777889999999985421 11222 2
Q ss_pred cCcCcEEEEEEcCCCCCEEEEEcCCC-cEEEEec
Q psy6415 77 HKATTVWAAKHLPQNRDLFVTCGGSG-SLNLWQL 109 (174)
Q Consensus 77 h~~~~i~~v~fsP~~~~~las~s~Dg-~V~lWd~ 109 (174)
+.. ....++++|+ +.++++...++ .|++||.
T Consensus 205 ~~~-~p~~i~~d~~-G~l~v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 205 ITN-YPIGVGINSN-GEILIADNHNNFNLTIFTQ 236 (286)
T ss_dssp TSC-SEEEEEECTT-CCEEEEECSSSCEEEEECT
T ss_pred ccC-CCcEEEECCC-CCEEEEeCCCCEEEEEECC
Confidence 234 6889999995 57889888886 9999998
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.84 E-value=2e-07 Score=74.46 Aligned_cols=97 Identities=14% Similarity=0.129 Sum_probs=69.8
Q ss_pred CcEEEEECCCCCeEEEee--cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcc-cccceeee----eecccCcCc
Q psy6415 9 GDLKMFDLKTMSLKWETN--LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLH-REKGFAYL----SEKAHKATT 81 (174)
Q Consensus 9 g~iklWDl~~~~~~~~~~--~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~-~~~~~~~~----~~~~h~~~~ 81 (174)
++|.+||..++++..... .-.....|+++|++ +.+++.+.++.|++||..... .+..+... .-..+-. .
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g---~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~-~ 144 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG---NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFC-Q 144 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS---CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCS-S
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCC---CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccC-C
Confidence 589999999888765543 22468999999974 788888899999999987542 11111000 0023334 5
Q ss_pred EEEEEEcCCCCCEEEEEc-CCCcEEEEec
Q psy6415 82 VWAAKHLPQNRDLFVTCG-GSGSLNLWQL 109 (174)
Q Consensus 82 i~~v~fsP~~~~~las~s-~Dg~V~lWd~ 109 (174)
.+.|+|+|+++.++++.+ .+++|++||.
T Consensus 145 P~~ia~~~~~g~lyv~d~~~~~~I~~~~~ 173 (329)
T 3fvz_A 145 PTDVAVEPSTGAVFVSDGYCNSRIVQFSP 173 (329)
T ss_dssp EEEEEECTTTCCEEEEECSSCCEEEEECT
T ss_pred CcEEEEeCCCCeEEEEeCCCCCeEEEEcC
Confidence 789999996678889887 7999999997
No 172
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.79 E-value=8.5e-08 Score=75.02 Aligned_cols=89 Identities=9% Similarity=-0.040 Sum_probs=61.2
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc-CcC
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH-KAT 80 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h-~~~ 80 (174)
++++..++.|..||..++ ..........+.+++++|++ +.+++...++.|.+||.++++... + ....... ..
T Consensus 43 ~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg---~l~v~~~~~~~i~~~d~~~g~~~~-~-~~~~~~~~~~- 115 (296)
T 3e5z_A 43 IFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQG---HLIACSHGLRRLERQREPGGEWES-I-ADSFEGKKLN- 115 (296)
T ss_dssp EEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTC---CEEEEETTTTEEEEECSTTCCEEE-E-ECEETTEECC-
T ss_pred EEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCC---cEEEEecCCCeEEEEcCCCCcEEE-E-eeccCCCCCC-
Confidence 678888999999999988 43333345668999999974 777777778999999997654321 1 0011111 12
Q ss_pred cEEEEEEcCCCCCEEEEE
Q psy6415 81 TVWAAKHLPQNRDLFVTC 98 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~ 98 (174)
.++.+++.|+ +.+++|.
T Consensus 116 ~~~~i~~d~~-G~l~vtd 132 (296)
T 3e5z_A 116 SPNDVCLAPD-GSLWFSD 132 (296)
T ss_dssp CCCCEEECTT-SCEEEEE
T ss_pred CCCCEEECCC-CCEEEEC
Confidence 4678999994 5688874
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.79 E-value=2.7e-07 Score=73.00 Aligned_cols=91 Identities=8% Similarity=0.034 Sum_probs=64.0
Q ss_pred EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCC----CcEEEEECCCcccccceeeeeecc
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLE----AKLFVFDLKTLHREKGFAYLSEKA 76 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~D----g~I~iWD~~~~~~~~~~~~~~~~~ 76 (174)
++++..++.|.+||+++++..... .....+.+++++|++ +.++++..+ +.|.+||.++..... + . ....
T Consensus 59 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg---~l~v~~~~~~~~~~~i~~~d~~~~~~~~-~-~-~~~~ 132 (333)
T 2dg1_A 59 FLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDG---RLFVCYLGDFKSTGGIFAATENGDNLQD-I-I-EDLS 132 (333)
T ss_dssp EEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTS---CEEEEECTTSSSCCEEEEECTTSCSCEE-E-E-CSSS
T ss_pred EEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCC---cEEEEeCCCCCCCceEEEEeCCCCEEEE-E-E-ccCc
Confidence 456778899999999988865443 345679999999974 677777666 689999998754221 1 0 1012
Q ss_pred cCcCcEEEEEEcCCCCCEEEEEcC
Q psy6415 77 HKATTVWAAKHLPQNRDLFVTCGG 100 (174)
Q Consensus 77 h~~~~i~~v~fsP~~~~~las~s~ 100 (174)
+.. .++.++++|+ +.++++...
T Consensus 133 ~~~-~~~~i~~d~~-g~l~v~~~~ 154 (333)
T 2dg1_A 133 TAY-CIDDMVFDSK-GGFYFTDFR 154 (333)
T ss_dssp SCC-CEEEEEECTT-SCEEEEECC
T ss_pred cCC-cccceEECCC-CCEEEEecc
Confidence 334 7899999995 567776654
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.78 E-value=3.1e-08 Score=79.77 Aligned_cols=85 Identities=19% Similarity=0.124 Sum_probs=56.2
Q ss_pred EEEEec-CCc--EEEEECCCCCeEEEeecC-CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415 2 VVAGYD-NGD--LKMFDLKTMSLKWETNLK-NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH 77 (174)
Q Consensus 2 lasgs~-Dg~--iklWDl~~~~~~~~~~~~-~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h 77 (174)
||.++. +|. |.+||+.+++........ ..+.+++|+|++ +.|+.++.++.|++||+.+.+... + ...+
T Consensus 50 l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg---~~l~~~~~~~~l~~~d~~~g~~~~---~--~~~~ 121 (388)
T 3pe7_A 50 LLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDD---DALFYVKDGRNLMRVDLATLEENV---V--YQVP 121 (388)
T ss_dssp EEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTS---SEEEEEETTTEEEEEETTTCCEEE---E--EECC
T ss_pred EEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCC---CEEEEEeCCCeEEEEECCCCccee---e--eech
Confidence 566666 674 888899988876544333 334467899974 899999999999999999875432 1 1233
Q ss_pred CcCcEEEE--EEcCCCCCEEE
Q psy6415 78 KATTVWAA--KHLPQNRDLFV 96 (174)
Q Consensus 78 ~~~~i~~v--~fsP~~~~~la 96 (174)
.. .+... .++|+ +..++
T Consensus 122 ~~-~~~~~~~~~~~d-g~~l~ 140 (388)
T 3pe7_A 122 AE-WVGYGTWVANSD-CTKLV 140 (388)
T ss_dssp TT-EEEEEEEEECTT-SSEEE
T ss_pred hh-cccccceeECCC-CCeec
Confidence 33 44333 34884 45665
No 175
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.78 E-value=3.9e-07 Score=70.62 Aligned_cols=92 Identities=10% Similarity=0.183 Sum_probs=66.5
Q ss_pred CCcEEEEECCCCCeEEEee--cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEE
Q psy6415 8 NGDLKMFDLKTMSLKWETN--LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAA 85 (174)
Q Consensus 8 Dg~iklWDl~~~~~~~~~~--~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v 85 (174)
++.|++|| .+++...... ....+.+|+++|++ +.+++.+.++.|++||..... ...+ ....+.. .++.+
T Consensus 99 ~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g---~l~v~~~~~~~i~~~~~~g~~-~~~~---~~~~~~~-~p~~i 169 (286)
T 1q7f_A 99 THQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKG---RIIVVECKVMRVIIFDQNGNV-LHKF---GCSKHLE-FPNGV 169 (286)
T ss_dssp GCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTS---CEEEEETTTTEEEEECTTSCE-EEEE---ECTTTCS-SEEEE
T ss_pred CCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCC---CEEEEECCCCEEEEEcCCCCE-EEEe---CCCCccC-CcEEE
Confidence 89999999 4555554443 23568999999964 777888889999999975421 1111 1113334 68999
Q ss_pred EEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 86 KHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 86 ~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
+++|+ +.++++.+.++.|++||.
T Consensus 170 ~~~~~-g~l~v~~~~~~~i~~~~~ 192 (286)
T 1q7f_A 170 VVNDK-QEIFISDNRAHCVKVFNY 192 (286)
T ss_dssp EECSS-SEEEEEEGGGTEEEEEET
T ss_pred EECCC-CCEEEEECCCCEEEEEcC
Confidence 99994 568898888999999998
No 176
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.76 E-value=2.1e-07 Score=74.77 Aligned_cols=97 Identities=18% Similarity=0.072 Sum_probs=63.8
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecCCC-EEEEE--ecCCCCCCCEEEEE----------------------eCCCcEE
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLKNG-VCGVD--FDRRDIPMNKLVAT----------------------TLEAKLF 56 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~-V~sv~--f~~~~~~~~~l~s~----------------------s~Dg~I~ 56 (174)
|+.++.++.|++||+.+++.......... +.... ++|++ ..++.. +.+..|.
T Consensus 95 l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (388)
T 3pe7_A 95 LFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDC---TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLM 171 (388)
T ss_dssp EEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTS---SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEE
T ss_pred EEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCC---CeeccccccCcccccccccchhhhhhccCCcceEE
Confidence 67888889999999999987654443333 33333 47763 666532 3457899
Q ss_pred EEECCCcccccceeeeeecccCcCcEEEEEEcC-CCCCEEEEEcCC------CcEEEEec
Q psy6415 57 VFDLKTLHREKGFAYLSEKAHKATTVWAAKHLP-QNRDLFVTCGGS------GSLNLWQL 109 (174)
Q Consensus 57 iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP-~~~~~las~s~D------g~V~lWd~ 109 (174)
+||+.+++.. .+..+.. .+..++|+| ++ ..||.++.+ ..|.++|.
T Consensus 172 ~~d~~~g~~~------~l~~~~~-~~~~~~~sp~dg-~~l~~~~~~~~~~~~~~l~~~d~ 223 (388)
T 3pe7_A 172 RVDLKTGEST------VILQENQ-WLGHPIYRPYDD-STVAFCHEGPHDLVDARMWLINE 223 (388)
T ss_dssp EEETTTCCEE------EEEEESS-CEEEEEEETTEE-EEEEEEECSCTTTSSCSEEEEET
T ss_pred EEECCCCceE------EeecCCc-cccccEECCCCC-CEEEEEEecCCCCCcceEEEEeC
Confidence 9999986522 2234555 789999999 65 455555543 36666666
No 177
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.76 E-value=3.1e-07 Score=79.71 Aligned_cols=98 Identities=12% Similarity=0.005 Sum_probs=77.3
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECC--CcccccceeeeeecccCc
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK--TLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~--~~~~~~~~~~~~~~~h~~ 79 (174)
+++...+++|.++|..+++++........+..+.|+|++ +++.+++.|+.|.+||+. +.+.. .++....
T Consensus 170 ~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDG---r~lyv~~~dg~V~viD~~~~t~~~v-----~~i~~G~- 240 (567)
T 1qks_A 170 SVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASG---RYLFVIGRDGKVNMIDLWMKEPTTV-----AEIKIGS- 240 (567)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTS---CEEEEEETTSEEEEEETTSSSCCEE-----EEEECCS-
T ss_pred EEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCC---CEEEEEcCCCeEEEEECCCCCCcEe-----EEEecCC-
Confidence 567788999999999999988777666678899999974 888889999999999996 44322 2333322
Q ss_pred CcEEEEEEc----CCCCCEEEEEcCCCcEEEEec
Q psy6415 80 TTVWAAKHL----PQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 80 ~~i~~v~fs----P~~~~~las~s~Dg~V~lWd~ 109 (174)
.-..++|+ |++..++++.-.+++|.++|.
T Consensus 241 -~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~ 273 (567)
T 1qks_A 241 -EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDG 273 (567)
T ss_dssp -EEEEEEECCSTTCTTTEEEEEEEETTEEEEEET
T ss_pred -CCceeEEccccCCCCCEEEEEEccCCeEEEEEC
Confidence 35789999 677667777777899999998
No 178
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.75 E-value=2e-07 Score=75.89 Aligned_cols=121 Identities=17% Similarity=0.191 Sum_probs=77.4
Q ss_pred EEecCCcEEEEECCCCCeEEE--eec-----------CCCEEEEEecCCCCCCCEEEEE-e----------CCCcEEEEE
Q psy6415 4 AGYDNGDLKMFDLKTMSLKWE--TNL-----------KNGVCGVDFDRRDIPMNKLVAT-T----------LEAKLFVFD 59 (174)
Q Consensus 4 sgs~Dg~iklWDl~~~~~~~~--~~~-----------~~~V~sv~f~~~~~~~~~l~s~-s----------~Dg~I~iWD 59 (174)
..+.+++|.++|+........ ... ..+...++|+|++ +.+..+ + ..++|.+||
T Consensus 216 ~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg---~~lyv~~~~~~~~~~~~~~~~~v~viD 292 (361)
T 2oiz_A 216 FVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRAS---GRMYVFMHPDGKEGTHKFPAAEIWVMD 292 (361)
T ss_dssp EEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTT---TEEEEEEESSCCTTCTTCCCSEEEEEE
T ss_pred EEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCC---CeEEEEEccCCCcccccCCCceEEEEE
Confidence 345678899999876543211 100 1122237899974 555443 3 135899999
Q ss_pred CCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCC
Q psy6415 60 LKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDID 139 (174)
Q Consensus 60 ~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 139 (174)
+++.+.+ .++..+. .++++|+|++. .|++++. ++|.+||.+ .
T Consensus 293 ~~t~~~v-----~~i~~~~---p~~ia~spdg~-~l~v~n~-~~v~v~D~~----------------------------t 334 (361)
T 2oiz_A 293 TKTKQRV-----ARIPGRD---ALSMTIDQQRN-LMLTLDG-GNVNVYDIS----------------------------Q 334 (361)
T ss_dssp TTTTEEE-----EEEECTT---CCEEEEETTTT-EEEEECS-SCEEEEECS----------------------------S
T ss_pred CCCCcEE-----EEEecCC---eeEEEECCCCC-EEEEeCC-CeEEEEECC----------------------------C
Confidence 9987543 2333432 78999999654 6666666 999999991 1
Q ss_pred CCccccccccceeeeeeccccceeeeeeCCCCC
Q psy6415 140 DIPMGVPGSLTLLQEATLSSQPINSLDWSADKL 172 (174)
Q Consensus 140 g~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~ 172 (174)
| ..+++.++..+...-+.|.|+|||.
T Consensus 335 ~-------~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 335 P-------EPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp S-------SCEEEEEETTSCSSEEEEEECCCSC
T ss_pred C-------cceeeEEeccCCCCcEEEEecCCCC
Confidence 1 1156777655555568899999985
No 179
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.73 E-value=4.1e-07 Score=72.67 Aligned_cols=99 Identities=12% Similarity=0.027 Sum_probs=66.3
Q ss_pred EEEEe-cCCcEEEEECCCCCeEEEeec-C----------CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccce
Q psy6415 2 VVAGY-DNGDLKMFDLKTMSLKWETNL-K----------NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGF 69 (174)
Q Consensus 2 lasgs-~Dg~iklWDl~~~~~~~~~~~-~----------~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~ 69 (174)
+++.+ .++.|++||. .+........ . ....+|+++|+. ++.+++...++.|++||..+++.+..+
T Consensus 158 yv~d~~~~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~--g~l~v~d~~~~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 158 FVSDGYCNSRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHL--DQLCVADRENGRIQCFKTDTKEFVREI 234 (329)
T ss_dssp EEEECSSCCEEEEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETTT--TEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEEeCCCCCeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCC--CEEEEEECCCCEEEEEECCCCcEEEEE
Confidence 45554 6899999995 4555444321 1 238899999963 367788889999999999865533221
Q ss_pred eeeeecccCcCcEEEEEEcCCCCCEEEEE-------cCCCcEEEEec
Q psy6415 70 AYLSEKAHKATTVWAAKHLPQNRDLFVTC-------GGSGSLNLWQL 109 (174)
Q Consensus 70 ~~~~~~~h~~~~i~~v~fsP~~~~~las~-------s~Dg~V~lWd~ 109 (174)
....+.. .+++++|+| +.++++. +.+.+|++||+
T Consensus 235 ---~~~~~~~-~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~ 275 (329)
T 3fvz_A 235 ---KHASFGR-NVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNF 275 (329)
T ss_dssp ---CCTTTTT-CEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEET
T ss_pred ---eccccCC-CcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEc
Confidence 1124555 789999999 3344443 34458999998
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.70 E-value=1.3e-07 Score=75.13 Aligned_cols=76 Identities=13% Similarity=0.182 Sum_probs=52.0
Q ss_pred CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCC---C--cEEEEECCCcccccceeeeeecccCcCcE
Q psy6415 8 NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLE---A--KLFVFDLKTLHREKGFAYLSEKAHKATTV 82 (174)
Q Consensus 8 Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D---g--~I~iWD~~~~~~~~~~~~~~~~~h~~~~i 82 (174)
++.|.+||+.+++.... ..+.+++|+|++ +.||.++.+ + .|.+||+.+++... +..+ . .+
T Consensus 42 ~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg---~~la~~~~~~~~~~~~l~~~~~~~g~~~~------l~~~-~-~~ 106 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI----ENATMPRISPDG---KKIAFMRANEEKKVSEIWVADLETLSSKK------ILEA-K-NI 106 (347)
T ss_dssp EEEEEEEETTTCCEEEE----ESCEEEEECTTS---SEEEEEEEETTTTEEEEEEEETTTTEEEE------EEEE-S-EE
T ss_pred cceEEEEeCCCCceEEc----ccCCCeEECCCC---CEEEEEEeccCCCcceEEEEECCCCceEE------EEcC-C-Cc
Confidence 67899999998875433 457889999975 888877654 3 47888887754321 1122 2 27
Q ss_pred EEEEEcCCCCCEEEEEc
Q psy6415 83 WAAKHLPQNRDLFVTCG 99 (174)
Q Consensus 83 ~~v~fsP~~~~~las~s 99 (174)
..++|+|++ ..||.++
T Consensus 107 ~~~~wspdg-~~l~~~~ 122 (347)
T 2gop_A 107 RSLEWNEDS-RKLLIVG 122 (347)
T ss_dssp EEEEECTTS-SEEEEEE
T ss_pred cceeECCCC-CEEEEEE
Confidence 899999954 5556555
No 181
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.70 E-value=9.4e-08 Score=83.94 Aligned_cols=102 Identities=18% Similarity=0.061 Sum_probs=68.4
Q ss_pred CEEEEEecCCCCCCCEEE-----EEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCc-
Q psy6415 30 GVCGVDFDRRDIPMNKLV-----ATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGS- 103 (174)
Q Consensus 30 ~V~sv~f~~~~~~~~~l~-----s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~- 103 (174)
.+.+++|||++ ++|| .|+++.+|++||+.+++... ...+.. . ...+++|+|+ +..|+.++.|..
T Consensus 122 ~~~~~~~SPDG---~~la~~~~~~G~~~~~i~v~dl~tg~~~~---~~~~~~--~-~~~~~~wspD-g~~l~~~~~d~~~ 191 (695)
T 2bkl_A 122 SLGTWAVSWDG---KKVAFAQKPNAADEAVLHVIDVDSGEWSK---VDVIEG--G-KYATPKWTPD-SKGFYYEWLPTDP 191 (695)
T ss_dssp EEEEEEECTTS---SEEEEEEEETTCSCCEEEEEETTTCCBCS---SCCBSC--C-TTCCCEECTT-SSEEEEEECCCCT
T ss_pred EEEEEEECCCC---CEEEEEECCCCCceEEEEEEECCCCCCcC---CcccCc--c-cccceEEecC-CCEEEEEEecCCC
Confidence 48899999975 8887 34456789999999876431 001111 1 1267899995 567788888776
Q ss_pred ------------EEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCC
Q psy6415 104 ------------LNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADK 171 (174)
Q Consensus 104 ------------V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~ 171 (174)
|++|++.+ |. ...+++.....|...+.++.|||||
T Consensus 192 ~~~~~~~~~~~~v~~~~l~t----------------------------~~-----~~~~lv~~~~~~~~~~~~~~~SpDG 238 (695)
T 2bkl_A 192 SIKVDERPGYTTIRYHTLGT----------------------------EP-----SKDTVVHERTGDPTTFLQSDLSRDG 238 (695)
T ss_dssp TSCGGGGGGGCEEEEEETTS----------------------------CG-----GGCEEEECCCCCTTCEEEEEECTTS
T ss_pred CCccccCCCCCEEEEEECCC----------------------------Cc-----hhceEEEecCCCCEEEEEEEECCCC
Confidence 99999911 00 0113566666677778888899988
Q ss_pred CCC
Q psy6415 172 LGL 174 (174)
Q Consensus 172 ~~~ 174 (174)
+-|
T Consensus 239 ~~l 241 (695)
T 2bkl_A 239 KYL 241 (695)
T ss_dssp CCE
T ss_pred CEE
Confidence 643
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.68 E-value=1.8e-07 Score=82.30 Aligned_cols=94 Identities=10% Similarity=0.021 Sum_probs=65.0
Q ss_pred cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCc----------------EEEEECCCcccccceeeee
Q psy6415 10 DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAK----------------LFVFDLKTLHREKGFAYLS 73 (174)
Q Consensus 10 ~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~----------------I~iWD~~~~~~~~~~~~~~ 73 (174)
+|++||+.+++..........+.+++|+|++ +.|+.++.|+. |++|++.+..... ..+..
T Consensus 152 ~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg---~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~-~~v~~ 227 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVLERVKFSCMAWTHDG---KGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED-ILCAE 227 (710)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCEEECTTS---SEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC-EEEEC
T ss_pred EEEEEECCCCCCCcccccCcccceEEEEeCC---CEEEEEEECCccccccccccccCCCCEEEEEECCCCcccc-eEEec
Confidence 8999999999876432222236679999974 88998888776 9999998764221 11222
Q ss_pred ecccCcCcEEEEEEcCCCCCEEEEEcC-----CCcEEEEec
Q psy6415 74 EKAHKATTVWAAKHLPQNRDLFVTCGG-----SGSLNLWQL 109 (174)
Q Consensus 74 ~~~h~~~~i~~v~fsP~~~~~las~s~-----Dg~V~lWd~ 109 (174)
...|.. .+.+++|+|++. .|+.++. +..|.+||+
T Consensus 228 ~~~~~~-~~~~~~~SpDg~-~l~~~~~~~~~~~~~l~~~d~ 266 (710)
T 2xdw_A 228 FPDEPK-WMGGAELSDDGR-YVLLSIREGCDPVNRLWYCDL 266 (710)
T ss_dssp CTTCTT-CEEEEEECTTSC-EEEEEEECSSSSCCEEEEEEG
T ss_pred cCCCCe-EEEEEEEcCCCC-EEEEEEEccCCCccEEEEEEC
Confidence 223455 688999999654 5554443 678999999
No 183
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.62 E-value=4.2e-07 Score=72.85 Aligned_cols=102 Identities=9% Similarity=0.026 Sum_probs=68.4
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT 81 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~ 81 (174)
.++...+++|.+||.++++.+...........|+++++ +..+++...++.|.+||+++.+....+......++.. .
T Consensus 57 yv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~---g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~-~ 132 (328)
T 3dsm_A 57 WIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSD---EKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESG-S 132 (328)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEET---TEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTC-B
T ss_pred EEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCC---CeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCC-C
Confidence 35566789999999999998776655567899999875 2444555589999999999865332211100000111 2
Q ss_pred EEEEEEcCCCCCEEEEEc-CCCcEEEEec
Q psy6415 82 VWAAKHLPQNRDLFVTCG-GSGSLNLWQL 109 (174)
Q Consensus 82 i~~v~fsP~~~~~las~s-~Dg~V~lWd~ 109 (174)
...+++ . ++.++++.. .+++|.+||.
T Consensus 133 p~~i~~-~-~~~lyv~~~~~~~~v~viD~ 159 (328)
T 3dsm_A 133 TEQMVQ-Y-GKYVYVNCWSYQNRILKIDT 159 (328)
T ss_dssp CCCEEE-E-TTEEEEEECTTCCEEEEEET
T ss_pred cceEEE-E-CCEEEEEcCCCCCEEEEEEC
Confidence 345666 3 566777765 4899999999
No 184
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.60 E-value=1.1e-07 Score=83.42 Aligned_cols=99 Identities=9% Similarity=0.031 Sum_probs=65.4
Q ss_pred EEecCCcEEEEECCCCCeEEEeecCCCE--EEEEecCCCCCCCEEEEEeCCCc-------------EEEEECCCcccccc
Q psy6415 4 AGYDNGDLKMFDLKTMSLKWETNLKNGV--CGVDFDRRDIPMNKLVATTLEAK-------------LFVFDLKTLHREKG 68 (174)
Q Consensus 4 sgs~Dg~iklWDl~~~~~~~~~~~~~~V--~sv~f~~~~~~~~~l~s~s~Dg~-------------I~iWD~~~~~~~~~ 68 (174)
+|+++.+|++||+.+++... ..+...+ .+++|+|++ ..|+.++.|.. |++|++.+.....
T Consensus 142 ~G~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg---~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~- 216 (695)
T 2bkl_A 142 NAADEAVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDS---KGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKD- 216 (695)
T ss_dssp TTCSCCEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTS---SEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGC-
T ss_pred CCCceEEEEEEECCCCCCcC-CcccCcccccceEEecCC---CEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhc-
Confidence 35556789999999987641 1111222 678999975 88999988876 9999998765321
Q ss_pred eeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCC----cEEEEec
Q psy6415 69 FAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSG----SLNLWQL 109 (174)
Q Consensus 69 ~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg----~V~lWd~ 109 (174)
..+.....|.. .+.+++|||++.. |+.++.++ .|.+|+.
T Consensus 217 ~lv~~~~~~~~-~~~~~~~SpDG~~-l~~~~~~~~~~~~l~~~~~ 259 (695)
T 2bkl_A 217 TVVHERTGDPT-TFLQSDLSRDGKY-LFVYILRGWSENDVYWKRP 259 (695)
T ss_dssp EEEECCCCCTT-CEEEEEECTTSCC-EEEEEEETTTEEEEEEECT
T ss_pred eEEEecCCCCE-EEEEEEECCCCCE-EEEEEeCCCCceEEEEEcC
Confidence 12223334556 7899999996654 45555444 5555554
No 185
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.52 E-value=5.2e-07 Score=73.45 Aligned_cols=97 Identities=10% Similarity=0.069 Sum_probs=65.4
Q ss_pred cCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEe----------CCCcEEEEECCCcccccceeeeeecc
Q psy6415 7 DNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATT----------LEAKLFVFDLKTLHREKGFAYLSEKA 76 (174)
Q Consensus 7 ~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s----------~Dg~I~iWD~~~~~~~~~~~~~~~~~ 76 (174)
.|++|.+||..++++.........- .++|+|++ +.|.+++ .+++|.+||+.+.+....... ...
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg---~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~--~~~ 102 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDG---KKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISL--PPK 102 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE-EEEECTTS---SEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEE--CTT
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC-ceEECCCC---CEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEc--Ccc
Confidence 4789999999999877654433233 89999974 7777765 377899999987654332211 101
Q ss_pred ---cCcCcEEEEEEcCCCCCEEEEEcC-CCcEEEEecc
Q psy6415 77 ---HKATTVWAAKHLPQNRDLFVTCGG-SGSLNLWQLV 110 (174)
Q Consensus 77 ---h~~~~i~~v~fsP~~~~~las~s~-Dg~V~lWd~~ 110 (174)
+.. ....++|+|+++.++++... +++|.+||++
T Consensus 103 ~~~~g~-~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~ 139 (361)
T 2oiz_A 103 RVQGLN-YDGLFRQTTDGKFIVLQNASPATSIGIVDVA 139 (361)
T ss_dssp BCCBCC-CGGGEEECTTSSEEEEEEESSSEEEEEEETT
T ss_pred ccccCC-CcceEEECCCCCEEEEECCCCCCeEEEEECC
Confidence 122 45678999965544444433 7899999994
No 186
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.51 E-value=2.5e-06 Score=66.54 Aligned_cols=91 Identities=10% Similarity=-0.032 Sum_probs=58.8
Q ss_pred CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECC-CcccccceeeeeecccCcCcEEEEEE
Q psy6415 9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK-TLHREKGFAYLSEKAHKATTVWAAKH 87 (174)
Q Consensus 9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~-~~~~~~~~~~~~~~~h~~~~i~~v~f 87 (174)
+.|..+|.. ++...........+.++|+|++ +.|++.+.++.|++||+. ++..... ...+..+.. .+..+++
T Consensus 153 ~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg---~~lv~~~~~~~i~~~~~~~~g~~~~~--~~~~~~~~~-~p~~i~~ 225 (296)
T 3e5z_A 153 RWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSG---NLLVSDTGDNATHRYCLNARGETEYQ--GVHFTVEPG-KTDGLRV 225 (296)
T ss_dssp CEEEEECTT-SCEEEEECCCSSEEEEEECTTS---CEEEEETTTTEEEEEEECSSSCEEEE--EEEECCSSS-CCCSEEE
T ss_pred cEEEEECCC-CCEEEeecCCCCCccEEECCCC---CEEEEeCCCCeEEEEEECCCCcCcCC--CeEeeCCCC-CCCeEEE
Confidence 345555554 4444333344567899999974 777778889999999997 3221000 011123344 5678999
Q ss_pred cCCCCCEEEEEcCCCcEEEEec
Q psy6415 88 LPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 88 sP~~~~~las~s~Dg~V~lWd~ 109 (174)
.|+ +.+++++ ++.|.+||.
T Consensus 226 d~~-G~l~v~~--~~~v~~~~~ 244 (296)
T 3e5z_A 226 DAG-GLIWASA--GDGVHVLTP 244 (296)
T ss_dssp BTT-SCEEEEE--TTEEEEECT
T ss_pred CCC-CCEEEEc--CCeEEEECC
Confidence 995 5677766 788999998
No 187
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.50 E-value=1.1e-06 Score=70.42 Aligned_cols=88 Identities=8% Similarity=0.001 Sum_probs=56.7
Q ss_pred CcEEEEECCCCCeEEEeec--CCCEEEEEecCCCCCCCEEEEEeCC-----CcEEEEECCCcccccceeeeeecccCcCc
Q psy6415 9 GDLKMFDLKTMSLKWETNL--KNGVCGVDFDRRDIPMNKLVATTLE-----AKLFVFDLKTLHREKGFAYLSEKAHKATT 81 (174)
Q Consensus 9 g~iklWDl~~~~~~~~~~~--~~~V~sv~f~~~~~~~~~l~s~s~D-----g~I~iWD~~~~~~~~~~~~~~~~~h~~~~ 81 (174)
..|.+||+.++.......+ ...+..++|+|++ +.|+.++.+ +.|++||+++++... + .... .
T Consensus 216 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg---~~l~~~~~~~~~~~~~l~~~d~~~g~~~~---l---~~~~--~ 284 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDG---SAMAYVSYFKGQTDRVIYKANPETLENEE---V---MVMP--P 284 (396)
T ss_dssp CCCEEEETTSCCCEESSCCCTTEEEEEEEECTTS---SCEEEEEEETTTCCEEEEEECTTTCCEEE---E---EECC--S
T ss_pred ceEEEEECCCCceeEeeccCCCccccceEECCCC---CEEEEEecCCCCccceEEEEECCCCCeEE---e---eeCC--C
Confidence 4688899887664433222 1247889999974 777766544 459999998764321 1 1111 2
Q ss_pred EEEEEEcC-CCCCEEEEEc----------------CCCcEEEEec
Q psy6415 82 VWAAKHLP-QNRDLFVTCG----------------GSGSLNLWQL 109 (174)
Q Consensus 82 i~~v~fsP-~~~~~las~s----------------~Dg~V~lWd~ 109 (174)
.. +.|+| ++. ++++++ .++.|.+||+
T Consensus 285 ~~-~~~s~~dg~-~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~ 327 (396)
T 3c5m_A 285 CS-HLMSNFDGS-LMVGDGCDAPVDVADADSYNIENDPFLYVLNT 327 (396)
T ss_dssp EE-EEEECSSSS-EEEEEECCC----------CCCCCCEEEEEET
T ss_pred CC-CCccCCCCc-eEEEecCCcceeeccccccccCCCCcEEEEec
Confidence 33 88999 655 666654 3578999998
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.49 E-value=7.5e-07 Score=78.31 Aligned_cols=69 Identities=6% Similarity=-0.023 Sum_probs=48.9
Q ss_pred CEEEEEecCCCCCCCEEEEEeCCC-----cEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCc-
Q psy6415 30 GVCGVDFDRRDIPMNKLVATTLEA-----KLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGS- 103 (174)
Q Consensus 30 ~V~sv~f~~~~~~~~~l~s~s~Dg-----~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~- 103 (174)
.+.+++|+|++ ++||.++.++ +|++||+.+++.... ++ ... .+.+++|+|+ +..|+.++.|+.
T Consensus 126 ~~~~~~~SPDg---~~la~~~~~~G~~~~~i~v~d~~tg~~~~~----~~--~~~-~~~~~~wspD-g~~l~~~~~~~~~ 194 (710)
T 2xdw_A 126 ALRGYAFSEDG---EYFAYGLSASGSDWVTIKFMKVDGAKELPD----VL--ERV-KFSCMAWTHD-GKGMFYNAYPQQD 194 (710)
T ss_dssp EEEEEEECTTS---SEEEEEEEETTCSCEEEEEEETTTTEEEEE----EE--EEE-CSCCEEECTT-SSEEEEEECCCCS
T ss_pred EEEEEEECCCC---CEEEEEEcCCCCceEEEEEEECCCCCCCcc----cc--cCc-ccceEEEEeC-CCEEEEEEECCcc
Confidence 47889999975 8888765443 899999998764321 11 112 3567899995 556777777766
Q ss_pred ---------------EEEEec
Q psy6415 104 ---------------LNLWQL 109 (174)
Q Consensus 104 ---------------V~lWd~ 109 (174)
|++|++
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~l 215 (710)
T 2xdw_A 195 GKSDGTETSTNLHQKLYYHVL 215 (710)
T ss_dssp SCCSSSCCCCCCCCEEEEEET
T ss_pred ccccccccccCCCCEEEEEEC
Confidence 999998
No 189
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.49 E-value=1.2e-06 Score=69.29 Aligned_cols=91 Identities=21% Similarity=0.247 Sum_probs=63.9
Q ss_pred ecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415 6 YDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWA 84 (174)
Q Consensus 6 s~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~ 84 (174)
+.++.++.|. +..... ..+...+.+++|+|++ +.+++++.++.|.+||.++.+... ....+.. .+.+
T Consensus 24 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g---~l~~~~~~~~~i~~~d~~~~~~~~-----~~~~~~~-~~~~ 91 (333)
T 2dg1_A 24 ISESELQTIT---AEPWLEISKKGLQLEGLNFDRQG---QLFLLDVFEGNIFKINPETKEIKR-----PFVSHKA-NPAA 91 (333)
T ss_dssp CCGGGSCEEE---CEEEEEEESSCCCEEEEEECTTS---CEEEEETTTCEEEEECTTTCCEEE-----EEECSSS-SEEE
T ss_pred eecccCcccc---cceeEEEeccCccccCcEECCCC---CEEEEECCCCEEEEEeCCCCcEEE-----EeeCCCC-Ccce
Confidence 5567788882 222222 2344568899999864 777788899999999998754321 1113445 7999
Q ss_pred EEEcCCCCCEEEEEcCC----CcEEEEec
Q psy6415 85 AKHLPQNRDLFVTCGGS----GSLNLWQL 109 (174)
Q Consensus 85 v~fsP~~~~~las~s~D----g~V~lWd~ 109 (174)
++|+|+ +.+++++..+ +.|.+||.
T Consensus 92 i~~~~d-g~l~v~~~~~~~~~~~i~~~d~ 119 (333)
T 2dg1_A 92 IKIHKD-GRLFVCYLGDFKSTGGIFAATE 119 (333)
T ss_dssp EEECTT-SCEEEEECTTSSSCCEEEEECT
T ss_pred EEECCC-CcEEEEeCCCCCCCceEEEEeC
Confidence 999995 5688877776 68999998
No 190
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.47 E-value=3.9e-06 Score=65.37 Aligned_cols=95 Identities=18% Similarity=0.169 Sum_probs=61.0
Q ss_pred CcEEEEECCCCCeEEEeecCCCEEEEEec----CCCCCCCEE-EEEeCCCcEEEEECC-CcccccceeeeeecccC-cCc
Q psy6415 9 GDLKMFDLKTMSLKWETNLKNGVCGVDFD----RRDIPMNKL-VATTLEAKLFVFDLK-TLHREKGFAYLSEKAHK-ATT 81 (174)
Q Consensus 9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~----~~~~~~~~l-~s~s~Dg~I~iWD~~-~~~~~~~~~~~~~~~h~-~~~ 81 (174)
+.|..||.. ++...........+.++|+ |++ +.| ++.+.++.|.+||++ +...........+..+. . .
T Consensus 153 ~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg---~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~-~ 227 (314)
T 1pjx_A 153 GSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRP---YQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEG-G 227 (314)
T ss_dssp EEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCE---EEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSC-E
T ss_pred CeEEEECCC-CCEEEeccCCCCcceEEEecccCCCC---CEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCC-C
Confidence 467777766 5544333333456889999 863 444 555678999999986 32211000112233343 4 6
Q ss_pred EEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 82 VWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 82 i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
...+++.|+ +.++++...++.|.+||.
T Consensus 228 p~~i~~d~~-G~l~v~~~~~~~i~~~d~ 254 (314)
T 1pjx_A 228 ADGMDFDED-NNLLVANWGSSHIEVFGP 254 (314)
T ss_dssp EEEEEEBTT-CCEEEEEETTTEEEEECT
T ss_pred CCceEECCC-CCEEEEEcCCCEEEEEcC
Confidence 788999994 578888878899999998
No 191
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.41 E-value=2.1e-06 Score=68.73 Aligned_cols=92 Identities=10% Similarity=-0.008 Sum_probs=62.1
Q ss_pred cCCcEEEEECCCCCeEEEeecCCCEEEEEecC-CCCCCCEEEEEeCC------CcEEEEECCCcccccceeeeeeccc--
Q psy6415 7 DNGDLKMFDLKTMSLKWETNLKNGVCGVDFDR-RDIPMNKLVATTLE------AKLFVFDLKTLHREKGFAYLSEKAH-- 77 (174)
Q Consensus 7 ~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~-~~~~~~~l~s~s~D------g~I~iWD~~~~~~~~~~~~~~~~~h-- 77 (174)
.+..|.+||+.+++......+...+..++|+| ++ ..|+..+.+ ..|.+||+.+.+.. .+..+
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg---~~l~~~~~~~~~~~~~~l~~~d~~~~~~~------~l~~~~~ 236 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDD---STVGFCHEGPHDLVDARMWLVNEDGSNVR------KIKEHAE 236 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEE---EEEEEEECSCSSSCSCCCEEEETTSCCCE------ESSCCCT
T ss_pred CcceEEEEECCCCcEEeeccCCcccccceECCCCC---CEEEEEecCCCCCCCceEEEEECCCCcee------EeeccCC
Confidence 45689999999988765555667799999999 53 667766544 46888898764321 11122
Q ss_pred CcCcEEEEEEcCCCCCEEEEEcCC-----CcEEEEec
Q psy6415 78 KATTVWAAKHLPQNRDLFVTCGGS-----GSLNLWQL 109 (174)
Q Consensus 78 ~~~~i~~v~fsP~~~~~las~s~D-----g~V~lWd~ 109 (174)
.. .+..++|+|++.. |+.++.+ +.|++||+
T Consensus 237 ~~-~~~~~~~spdg~~-l~~~~~~~~~~~~~l~~~d~ 271 (396)
T 3c5m_A 237 GE-SCTHEFWIPDGSA-MAYVSYFKGQTDRVIYKANP 271 (396)
T ss_dssp TE-EEEEEEECTTSSC-EEEEEEETTTCCEEEEEECT
T ss_pred Cc-cccceEECCCCCE-EEEEecCCCCccceEEEEEC
Confidence 22 5788999996544 4444333 45999999
No 192
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.35 E-value=1.3e-05 Score=63.97 Aligned_cols=92 Identities=10% Similarity=0.113 Sum_probs=68.0
Q ss_pred CcEEEEECCCCCeEEEeec--CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEE
Q psy6415 9 GDLKMFDLKTMSLKWETNL--KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAK 86 (174)
Q Consensus 9 g~iklWDl~~~~~~~~~~~--~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~ 86 (174)
+.|.++|.+++++...... ....+.++|+|++ +.|..+.. .|.+||..+.+.... . .+..+.. ..+.++
T Consensus 203 ~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~---~~lyv~~~--~v~~~d~~t~~~~~~-~--~~~~~~~-~p~gi~ 273 (328)
T 3dsm_A 203 PSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTR---DTLYWINN--DIWRMPVEADRVPVR-P--FLEFRDT-KYYGLT 273 (328)
T ss_dssp CEEEEEETTTTEEEEEEECCTTCCCEEEEECTTS---CEEEEESS--SEEEEETTCSSCCSS-C--SBCCCSS-CEEEEE
T ss_pred ceEEEEECCCCeEEEEEecCCCCCceeEEEecCC---CEEEEEcc--EEEEEECCCCceeee-e--eecCCCC-ceEEEE
Confidence 7899999999887655443 2468999999974 66666544 899999987653211 0 1111134 678999
Q ss_pred EcCCCCCEEEEE----cCCCcEEEEec
Q psy6415 87 HLPQNRDLFVTC----GGSGSLNLWQL 109 (174)
Q Consensus 87 fsP~~~~~las~----s~Dg~V~lWd~ 109 (174)
++|+++.++++. ..+++|.+||.
T Consensus 274 vdp~~g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 274 VNPNNGEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp ECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred EcCCCCeEEEEcccccccCCEEEEECC
Confidence 999888899998 78999999999
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.32 E-value=1.6e-05 Score=60.60 Aligned_cols=98 Identities=13% Similarity=0.074 Sum_probs=67.9
Q ss_pred EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
.++...++.|.+||..+....... .....+++|+++|++ +.+++...++.|.+||..+..... ....+-.
T Consensus 122 ~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g---~l~v~~~~~~~i~~~~~~~~~~~~-----~~~~~~~- 192 (270)
T 1rwi_B 122 YVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSG---NVYVTDTDNNRVVKLEAESNNQVV-----LPFTDIT- 192 (270)
T ss_dssp EEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTC---CEEEEEGGGTEEEEECTTTCCEEE-----CCCSSCC-
T ss_pred EEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCC---CEEEEECCCCEEEEEecCCCceEe-----ecccCCC-
Confidence 345556788999987655443221 122457789999864 777777788999999988643211 1112224
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+..+++.|+ +.++++...++.|.+||.
T Consensus 193 ~p~~i~~d~~-g~l~v~~~~~~~v~~~~~ 220 (270)
T 1rwi_B 193 APWGIAVDEA-GTVYVTEHNTNQVVKLLA 220 (270)
T ss_dssp SEEEEEECTT-CCEEEEETTTSCEEEECT
T ss_pred CceEEEECCC-CCEEEEECCCCcEEEEcC
Confidence 6889999995 478898888999999998
No 194
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.31 E-value=7.1e-06 Score=64.88 Aligned_cols=86 Identities=14% Similarity=0.225 Sum_probs=58.8
Q ss_pred cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeC---------------------------CCcEEEEECCC
Q psy6415 10 DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTL---------------------------EAKLFVFDLKT 62 (174)
Q Consensus 10 ~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~---------------------------Dg~I~iWD~~~ 62 (174)
.|.+||+.+++......... +.+++|+|++ +.|+.++. ...|.+||+.+
T Consensus 86 ~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg---~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 161 (347)
T 2gop_A 86 EIWVADLETLSSKKILEAKN-IRSLEWNEDS---RKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES 161 (347)
T ss_dssp EEEEEETTTTEEEEEEEESE-EEEEEECTTS---SEEEEEEECCCC---------CCCC---------CEEEEEEEETTT
T ss_pred eEEEEECCCCceEEEEcCCC-ccceeECCCC---CEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC
Confidence 38888998887655444444 9999999974 78887763 25799999987
Q ss_pred cccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCC-------cEEEEec
Q psy6415 63 LHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSG-------SLNLWQL 109 (174)
Q Consensus 63 ~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg-------~V~lWd~ 109 (174)
++... .+.. . .+..++|+|+ + ++++++.++ ...||.+
T Consensus 162 ~~~~~-----~l~~--~-~~~~~~~spd-g-~~~~~~~~~~~~~~~~~~~l~~~ 205 (347)
T 2gop_A 162 EEVIE-----EFEK--P-RFSSGIWHRD-K-IVVNVPHREIIPQYFKFWDIYIW 205 (347)
T ss_dssp TEEEE-----EEEE--E-TTCEEEEETT-E-EEEEEECCCSSCCSSCCEEEEEE
T ss_pred CeEEe-----eecC--C-CcccccCCCC-e-EEEEEecccccccccccccEEEe
Confidence 65311 1112 2 4678899995 4 777776552 5677776
No 195
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.27 E-value=3.4e-05 Score=66.88 Aligned_cols=105 Identities=16% Similarity=0.136 Sum_probs=75.4
Q ss_pred EEEEecCCcEEEEECC--CCCeEEEeecCCCEEEEEec----CCCCCCCEEEE-EeCCCcEEEEECCCcccccceeeeee
Q psy6415 2 VVAGYDNGDLKMFDLK--TMSLKWETNLKNGVCGVDFD----RRDIPMNKLVA-TTLEAKLFVFDLKTLHREKGFAYLSE 74 (174)
Q Consensus 2 lasgs~Dg~iklWDl~--~~~~~~~~~~~~~V~sv~f~----~~~~~~~~l~s-~s~Dg~I~iWD~~~~~~~~~~~~~~~ 74 (174)
|.+++.|+.|.+||+. +++.+...........++|+ |++ .++++ ...+++|.|+|..+.+.++.......
T Consensus 211 lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDG---k~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~ 287 (567)
T 1qks_A 211 LFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWED---KYAIAGAYWPPQYVIMDGETLEPKKIQSTRGM 287 (567)
T ss_dssp EEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTT---TEEEEEEEETTEEEEEETTTCCEEEEEECCEE
T ss_pred EEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCC---CEEEEEEccCCeEEEEECCCCcEEEEEecccc
Confidence 5667889999999996 77776655545567899999 564 66655 55679999999988775543322111
Q ss_pred -----cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 75 -----KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 75 -----~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
..|....+..+.++|+++..+++-..+|.|.++|+
T Consensus 288 ~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~ 327 (567)
T 1qks_A 288 TYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDY 327 (567)
T ss_dssp CTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEET
T ss_pred ccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEec
Confidence 01222147788899977777888888999999998
No 196
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.26 E-value=3.4e-05 Score=60.48 Aligned_cols=86 Identities=14% Similarity=0.138 Sum_probs=56.3
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec-c-cCc
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK-A-HKA 79 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~-~-h~~ 79 (174)
+++...++.|..||..++... .......+.+++++|++ + |+.+. ++.|.+||.++.+... +.... . ...
T Consensus 28 ~~~d~~~~~i~~~d~~~~~~~-~~~~~~~~~~i~~~~dG---~-l~v~~-~~~l~~~d~~~g~~~~---~~~~~~~~~~~ 98 (297)
T 3g4e_A 28 LFVDIPAKKVCRWDSFTKQVQ-RVTMDAPVSSVALRQSG---G-YVATI-GTKFCALNWKEQSAVV---LATVDNDKKNN 98 (297)
T ss_dssp EEEETTTTEEEEEETTTCCEE-EEECSSCEEEEEEBTTS---S-EEEEE-TTEEEEEETTTTEEEE---EEECCTTCSSE
T ss_pred EEEECCCCEEEEEECCCCcEE-EEeCCCceEEEEECCCC---C-EEEEE-CCeEEEEECCCCcEEE---EEecCCCCCCC
Confidence 455667889999999887763 23345779999999974 5 44444 5689999998754211 11111 1 123
Q ss_pred CcEEEEEEcCCCCCEEEEE
Q psy6415 80 TTVWAAKHLPQNRDLFVTC 98 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~ 98 (174)
.++.+++.|+ +.++++.
T Consensus 99 -~~~di~~d~d-G~l~~~~ 115 (297)
T 3g4e_A 99 -RFNDGKVDPA-GRYFAGT 115 (297)
T ss_dssp -EEEEEEECTT-SCEEEEE
T ss_pred -CCCCEEECCC-CCEEEec
Confidence 5789999995 4566654
No 197
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.19 E-value=2.6e-05 Score=59.34 Aligned_cols=98 Identities=11% Similarity=0.028 Sum_probs=71.0
Q ss_pred EEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
.++...++.|.+||..+........ ....+.+|++++++ +.+++...++.|.+||..+.... .....+-.
T Consensus 164 ~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g---~l~v~~~~~~~v~~~~~~~~~~~-----~~~~~~~~- 234 (270)
T 1rwi_B 164 YVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAG---TVYVTEHNTNQVVKLLAGSTTST-----VLPFTGLN- 234 (270)
T ss_dssp EEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTC---CEEEEETTTSCEEEECTTCSCCE-----ECCCCSCS-
T ss_pred EEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCC---CEEEEECCCCcEEEEcCCCCcce-----eeccCCCC-
Confidence 3455567899999998776543322 22568899999863 77777778999999998764321 11112224
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+.++++.|+ +.++++...+++|+++++
T Consensus 235 ~p~~i~~~~~-g~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 235 TPLAVAVDSD-RTVYVADRGNDRVVKLTS 262 (270)
T ss_dssp CEEEEEECTT-CCEEEEEGGGTEEEEECC
T ss_pred CceeEEECCC-CCEEEEECCCCEEEEEcC
Confidence 6899999995 569999999999999999
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.19 E-value=0.00016 Score=55.29 Aligned_cols=96 Identities=8% Similarity=0.022 Sum_probs=66.8
Q ss_pred EEEecCCcEEEEECCCCCeEEEe--ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 3 VAGYDNGDLKMFDLKTMSLKWET--NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 3 asgs~Dg~iklWDl~~~~~~~~~--~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
++...++.|..||.. +...... .....+.+|++++++ +.+++...++.|..||... + +....+.....
T Consensus 30 v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g---~l~v~~~~~~~i~~~~~~g-~----~~~~~~~~~~~- 99 (299)
T 2z2n_A 30 ITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDG---EVWFTENAANKIGRITKKG-I----IKEYTLPNPDS- 99 (299)
T ss_dssp EEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTS---CEEEEETTTTEEEEECTTS-C----EEEEECSSTTC-
T ss_pred EEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCC---CEEEeCCCCCeEEEECCCC-c----EEEEeCCCcCC-
Confidence 333447889999988 6554322 134679999999863 6677777789999999863 2 11112222344
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+..+++.| ++.++++...++.|..||.
T Consensus 100 ~~~~i~~~~-~g~l~v~~~~~~~i~~~d~ 127 (299)
T 2z2n_A 100 APYGITEGP-NGDIWFTEMNGNRIGRITD 127 (299)
T ss_dssp CEEEEEECT-TSCEEEEETTTTEEEEECT
T ss_pred CceeeEECC-CCCEEEEecCCceEEEECC
Confidence 689999999 4578888888899999987
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.19 E-value=8.2e-06 Score=72.14 Aligned_cols=68 Identities=7% Similarity=-0.045 Sum_probs=46.0
Q ss_pred CEEEEEecCCCCCCCEEEEEeCC-----CcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCc-
Q psy6415 30 GVCGVDFDRRDIPMNKLVATTLE-----AKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGS- 103 (174)
Q Consensus 30 ~V~sv~f~~~~~~~~~l~s~s~D-----g~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~- 103 (174)
.+.+++|+|++ ++||.++.+ .+|++||+.+++.... . .+.. .+.+++|+|+ ..|+.++.|+.
T Consensus 164 ~~~~~~~SPDG---~~la~~~~~~G~e~~~i~v~dl~tg~~~~~----~--~~~~-~~~~~~wspD--~~l~~~~~~~~~ 231 (741)
T 1yr2_A 164 ALDAWAASDDG---RLLAYSVQDGGSDWRTVKFVGVADGKPLAD----E--LKWV-KFSGLAWLGN--DALLYSRFAEPK 231 (741)
T ss_dssp EEEEEEECTTS---SEEEEEEEETTCSEEEEEEEETTTCCEEEE----E--EEEE-ESCCCEESTT--SEEEEEECCCC-
T ss_pred EEEeEEECCCC---CEEEEEEcCCCCceEEEEEEECCCCCCCCc----c--CCCc-eeccEEEECC--CEEEEEEecCcc
Confidence 47889999975 888876543 4699999998764311 1 1111 2357899995 56666666654
Q ss_pred -------------EEEEec
Q psy6415 104 -------------LNLWQL 109 (174)
Q Consensus 104 -------------V~lWd~ 109 (174)
|++|++
T Consensus 232 ~~~~~~~~~~~~~v~~~~l 250 (741)
T 1yr2_A 232 EGQAFQALNYNQTVWLHRL 250 (741)
T ss_dssp -------CCCCCEEEEEET
T ss_pred cccccccCCCCCEEEEEEC
Confidence 888888
No 200
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.17 E-value=2.9e-05 Score=60.92 Aligned_cols=97 Identities=10% Similarity=-0.007 Sum_probs=67.7
Q ss_pred ecCCcEEEEECCCCCeEEEeecC--CCEEEEEecCCCCCCCEEEEEeC-CCcEEEEECCCcccccceeeee-ecccCcCc
Q psy6415 6 YDNGDLKMFDLKTMSLKWETNLK--NGVCGVDFDRRDIPMNKLVATTL-EAKLFVFDLKTLHREKGFAYLS-EKAHKATT 81 (174)
Q Consensus 6 s~Dg~iklWDl~~~~~~~~~~~~--~~V~sv~f~~~~~~~~~l~s~s~-Dg~I~iWD~~~~~~~~~~~~~~-~~~h~~~~ 81 (174)
+.++.|..||. +++.++..... ..+.++++.|++ +.+++.+. ++.|..+|.. ++.+..+.... ...+.. .
T Consensus 53 s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG---~~lv~~~~~~~~v~~vd~~-Gk~l~~~~~~~~~~~~~~-~ 126 (276)
T 3no2_A 53 SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDG---NALVAWCGHPSTILEVNMK-GEVLSKTEFETGIERPHA-Q 126 (276)
T ss_dssp ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTS---CEEEEEESTTEEEEEECTT-SCEEEEEEECCSCSSGGG-S
T ss_pred eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCC---CEEEEecCCCCEEEEEeCC-CCEEEEEeccCCCCcccc-c
Confidence 45788999999 78888776543 468899999874 88888777 7788888864 33222221111 012223 4
Q ss_pred EEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 82 VWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 82 i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+.+++.| ++.++++...++.|..||.
T Consensus 127 ~~~v~~~~-~G~~lv~~~~~~~v~~~d~ 153 (276)
T 3no2_A 127 FRQINKNK-KGNYLVPLFATSEVREIAP 153 (276)
T ss_dssp CSCCEECT-TSCEEEEETTTTEEEEECT
T ss_pred ccCceECC-CCCEEEEecCCCEEEEECC
Confidence 55667888 5678999999999999999
No 201
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.17 E-value=2.8e-05 Score=61.03 Aligned_cols=76 Identities=13% Similarity=0.094 Sum_probs=51.2
Q ss_pred CCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECC--CcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEE
Q psy6415 29 NGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLK--TLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLN 105 (174)
Q Consensus 29 ~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~--~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~ 105 (174)
...+.++|+|++ +.| ++.+.++.|.+||+. ++..........+..+.. ....+++.|+ +.+.++....+.|.
T Consensus 149 ~~pngi~~spdg---~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~-~p~g~~~d~~-G~lwva~~~~~~v~ 223 (297)
T 3g4e_A 149 DISNGLDWSLDH---KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQ-IPDGMCIDAE-GKLWVACYNGGRVI 223 (297)
T ss_dssp SBEEEEEECTTS---CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGC-EEEEEEEBTT-SCEEEEEETTTEEE
T ss_pred ccccceEEcCCC---CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCC-CCCeeEECCC-CCEEEEEcCCCEEE
Confidence 446889999974 555 667788999999974 332110011112223334 6788999995 57888888888999
Q ss_pred EEec
Q psy6415 106 LWQL 109 (174)
Q Consensus 106 lWd~ 109 (174)
.||.
T Consensus 224 ~~d~ 227 (297)
T 3g4e_A 224 RLDP 227 (297)
T ss_dssp EECT
T ss_pred EEcC
Confidence 9998
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.16 E-value=1.4e-05 Score=70.75 Aligned_cols=94 Identities=7% Similarity=0.053 Sum_probs=60.2
Q ss_pred CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCc--------------EEEEECCCcccccceeeeee
Q psy6415 9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAK--------------LFVFDLKTLHREKGFAYLSE 74 (174)
Q Consensus 9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~--------------I~iWD~~~~~~~~~~~~~~~ 74 (174)
.+|++||+.+++..........+.+++|+|+ +.|+.++.|+. |++|++.+..... ..+...
T Consensus 189 ~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD----~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-~lv~~~ 263 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADELKWVKFSGLAWLGN----DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSAD-QPVFAT 263 (741)
T ss_dssp EEEEEEETTTCCEEEEEEEEEESCCCEESTT----SEEEEEECCCC--------CCCCCEEEEEETTSCGGGC-EEEECC
T ss_pred EEEEEEECCCCCCCCccCCCceeccEEEECC----CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhC-EEEecc
Confidence 3599999999987543211111356889984 67877776654 8999997654221 112222
Q ss_pred cccCcCcEEEEEEcCCCCCEEEEEcCC-----CcEEEEec
Q psy6415 75 KAHKATTVWAAKHLPQNRDLFVTCGGS-----GSLNLWQL 109 (174)
Q Consensus 75 ~~h~~~~i~~v~fsP~~~~~las~s~D-----g~V~lWd~ 109 (174)
..+.. .+.++.|||++ ..|+..+.+ ..|++||+
T Consensus 264 ~~~~~-~~~~~~~SpDG-~~l~~~~~~~~~~~~~l~~~d~ 301 (741)
T 1yr2_A 264 PELPK-RGHGASVSSDG-RWVVITSSEGTDPVNTVHVARV 301 (741)
T ss_dssp TTCTT-CEEEEEECTTS-CEEEEEEECTTCSCCEEEEEEE
T ss_pred CCCCe-EEEEEEECCCC-CEEEEEEEccCCCcceEEEEEC
Confidence 33444 58899999955 455555544 38999998
No 203
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.13 E-value=0.00011 Score=58.56 Aligned_cols=93 Identities=10% Similarity=0.018 Sum_probs=56.3
Q ss_pred cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECC--Cc-ccccceeeeeecccCcCcEEEE
Q psy6415 10 DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLK--TL-HREKGFAYLSEKAHKATTVWAA 85 (174)
Q Consensus 10 ~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~--~~-~~~~~~~~~~~~~h~~~~i~~v 85 (174)
.|..+| +++...........+.++|+|++ +.| ++.+.++.|.+||+. ++ ..........+..... ....+
T Consensus 162 ~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg---~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~-~p~gi 235 (326)
T 2ghs_A 162 SIYHVA--KGKVTKLFADISIPNSICFSPDG---TTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKG-GMDGS 235 (326)
T ss_dssp EEEEEE--TTEEEEEEEEESSEEEEEECTTS---CEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSS-EEEEE
T ss_pred EEEEEe--CCcEEEeeCCCcccCCeEEcCCC---CEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCC-CCCee
Confidence 344444 45443322223457899999974 655 555678999999986 43 2111011112222334 56789
Q ss_pred EEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 86 KHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 86 ~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
++.++ +.++++...++.|..||.
T Consensus 236 ~~d~~-G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 236 VCDAE-GHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp EECTT-SCEEEEEETTTEEEEECT
T ss_pred EECCC-CCEEEEEeCCCEEEEECC
Confidence 99985 567777767788999988
No 204
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.07 E-value=6e-05 Score=59.24 Aligned_cols=87 Identities=6% Similarity=-0.123 Sum_probs=55.4
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc-CcC
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH-KAT 80 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h-~~~ 80 (174)
++++..++.|..||. ++...........++++++++++ +.+++...++.|.+||.. ++.. .+ .....+. ..
T Consensus 60 ~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG---~l~v~~~~~~~v~~~~~~-g~~~-~~-~~~~~~~~~~- 131 (305)
T 3dr2_A 60 VWSDLVGRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQ---RLVHCEHGRRAITRSDAD-GQAH-LL-VGRYAGKRLN- 131 (305)
T ss_dssp EEEETTTTEEEEEET-TSCEEEEEESCSCEEEEEECTTS---CEEEEETTTTEEEEECTT-SCEE-EE-ECEETTEECS-
T ss_pred EEEECCCCEEEEEeC-CCCEEEEeCCCCccceeeECCCC---CEEEEECCCCEEEEECCC-CCEE-EE-EeccCCCccC-
Confidence 567778899999998 45543333345678999999964 656655667899999986 3211 11 1111111 12
Q ss_pred cEEEEEEcCCCCCEEEE
Q psy6415 81 TVWAAKHLPQNRDLFVT 97 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las 97 (174)
.++.+++.|+ +.+++|
T Consensus 132 ~~~~i~~d~d-G~l~~t 147 (305)
T 3dr2_A 132 SPNDLIVARD-GAIWFT 147 (305)
T ss_dssp CCCCEEECTT-SCEEEE
T ss_pred CCCCEEECCC-CCEEEe
Confidence 4678999994 567776
No 205
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.04 E-value=3.9e-07 Score=74.55 Aligned_cols=100 Identities=13% Similarity=0.135 Sum_probs=57.3
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
.|++|+.||.|..||.++|++++.... ..+.+..+.++ +..+++++.|+.|+.||.++++.+..+ ..+...
T Consensus 11 ~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~---g~~~v~~s~dg~l~a~d~~tG~~~w~~-----~~~~~~ 81 (369)
T 2hz6_A 11 LLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVE---EPAFLPDPNDGSLYTLGSKNNEGLTKL-----PFTIPE 81 (369)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC--------CCEEECTTTCCEEEC-----CCSEEC-----SCCHHH
T ss_pred EEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcC---CCEEEEeCCCCEEEEEECCCCceeeee-----eccCcc
Confidence 378899999999999999999887665 55554444443 356777899999999999876542111 111100
Q ss_pred cEEE-EEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415 81 TVWA-AKHLPQNRDLFVTCGGSGSLNLWQLVS 111 (174)
Q Consensus 81 ~i~~-v~fsP~~~~~las~s~Dg~V~lWd~~~ 111 (174)
.+.+ ..+. .+ ..+++|+.||.|+.||.++
T Consensus 82 ~~~~sp~~~-~~-~~v~~g~~dg~v~a~D~~t 111 (369)
T 2hz6_A 82 LVQASPCRS-SD-GILYMGKKQDIWYVIDLLT 111 (369)
T ss_dssp HHTTCSCC-------CCCCEEEEEEEEECCC-
T ss_pred ccccCceEe-cC-CEEEEEeCCCEEEEEECCC
Confidence 1100 0011 13 3567788899999999943
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.03 E-value=8.3e-05 Score=57.70 Aligned_cols=98 Identities=21% Similarity=0.237 Sum_probs=68.4
Q ss_pred EEEecCCcEEEEECC-CCCeEE-----Eee-cC-CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee
Q psy6415 3 VAGYDNGDLKMFDLK-TMSLKW-----ETN-LK-NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE 74 (174)
Q Consensus 3 asgs~Dg~iklWDl~-~~~~~~-----~~~-~~-~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~ 74 (174)
++...++.|.+||++ ++.... ... +. ..+..+++++++ +.+++...++.|.+||.++.+... .+
T Consensus 192 v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G---~l~v~~~~~~~i~~~d~~~g~~~~-----~~ 263 (314)
T 1pjx_A 192 VAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDN---NLLVANWGSSHIEVFGPDGGQPKM-----RI 263 (314)
T ss_dssp EEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTC---CEEEEEETTTEEEEECTTCBSCSE-----EE
T ss_pred EEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCC---CEEEEEcCCCEEEEEcCCCCcEeE-----EE
Confidence 444567899999986 444211 111 11 457889999864 777888789999999998544322 22
Q ss_pred cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
..+.. .+.+++|+|++..++++...++.|..|++
T Consensus 264 ~~~~~-~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 264 RCPFE-KPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp ECSSS-CEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred eCCCC-CceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 23445 78999999965447888888899999998
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.02 E-value=4.4e-05 Score=63.22 Aligned_cols=100 Identities=6% Similarity=0.044 Sum_probs=67.5
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCC--cEEEEECCCcccccceeeeeecc-cC
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEA--KLFVFDLKTLHREKGFAYLSEKA-HK 78 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg--~I~iWD~~~~~~~~~~~~~~~~~-h~ 78 (174)
+++...++.|+.||+.++.+........... ++|+|++ +.|+++..++ .|.+||......... ...... ..
T Consensus 145 yv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g---~~l~~~d~~~~~~I~~~d~~~~~~~~~--~g~~~~~~~ 218 (409)
T 3hrp_A 145 LAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDK---QRVYSIGWEGTHTVYVYMKASGWAPTR--IGQLGSTFS 218 (409)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTS---SEEEEEBSSTTCEEEEEEGGGTTCEEE--EEECCTTSC
T ss_pred EEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCC---CcEEEEecCCCceEEEEEcCCCceeEE--eeeccchhc
Confidence 4555667899999999887655443333344 8999974 7888887766 788888765432111 101112 33
Q ss_pred cCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
. ..++++++|+++.+++ +..+++|+.||.
T Consensus 219 ~-~p~~iav~p~~g~lyv-~d~~~~I~~~d~ 247 (409)
T 3hrp_A 219 G-KIGAVALDETEEWLYF-VDSNKNFGRFNV 247 (409)
T ss_dssp S-CCCBCEECTTSSEEEE-ECTTCEEEEEET
T ss_pred C-CcEEEEEeCCCCeEEE-EECCCcEEEEEC
Confidence 4 6789999997666666 677899999998
No 208
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.00 E-value=0.00046 Score=52.71 Aligned_cols=96 Identities=5% Similarity=-0.111 Sum_probs=65.3
Q ss_pred EEEecCCcEEEEECCCCCeEE-Eee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 3 VAGYDNGDLKMFDLKTMSLKW-ETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 3 asgs~Dg~iklWDl~~~~~~~-~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
++...++.|..||.+ ++... ... ....+.+++++|++ +.+++...++.|.+||. +.+.. ......+..
T Consensus 72 v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g---~l~v~~~~~~~i~~~d~-~g~~~----~~~~~~~~~- 141 (299)
T 2z2n_A 72 FTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNG---DIWFTEMNGNRIGRITD-DGKIR----EYELPNKGS- 141 (299)
T ss_dssp EEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS---CEEEEETTTTEEEEECT-TCCEE----EEECSSTTC-
T ss_pred EeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCC---CEEEEecCCceEEEECC-CCCEE----EecCCCCCC-
Confidence 344457889999986 44322 211 34568999999863 67777778899999998 43211 111222334
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+..+++.|+ +.++++...++.|..||.
T Consensus 142 ~~~~i~~~~~-g~l~v~~~~~~~i~~~~~ 169 (299)
T 2z2n_A 142 YPSFITLGSD-NALWFTENQNNAIGRITE 169 (299)
T ss_dssp CEEEEEECTT-SCEEEEETTTTEEEEECT
T ss_pred CCceEEEcCC-CCEEEEeCCCCEEEEEcC
Confidence 6899999995 578888888889999988
No 209
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.99 E-value=7.5e-06 Score=66.83 Aligned_cols=93 Identities=14% Similarity=0.050 Sum_probs=49.3
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT 81 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~ 81 (174)
|++|+.|+.|+.||.++|+.++....... +.++|. ++.+++++.|+.|+.||.++++.+-.+... .
T Consensus 95 v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~---~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~---~----- 160 (369)
T 2hz6_A 95 LYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPS---TSLLYLGRTEYTITMYDTKTRELRWNATYF---D----- 160 (369)
T ss_dssp CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE---E-----
T ss_pred EEEEeCCCEEEEEECCCCcEEEEecCCCc---cccccc---CCEEEEEecCCEEEEEECCCCCEEEeEecc---c-----
Confidence 45678899999999999998876543332 344554 378889999999999999987643222110 1
Q ss_pred EEEEEEcCC---CCCEEEEEcCCCcEEEEec
Q psy6415 82 VWAAKHLPQ---NRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 82 i~~v~fsP~---~~~~las~s~Dg~V~lWd~ 109 (174)
.....+.++ ++. +..++.||.|..||.
T Consensus 161 ~~~~~~~~~~~~~~~-v~~~~~dg~v~a~d~ 190 (369)
T 2hz6_A 161 YAASLPEDDVDYKMS-HFVSNGDGLVVTVDS 190 (369)
T ss_dssp ECCBCCCCCTTCCCC-EEEEETSCEEEEECT
T ss_pred ccCccccCCccccce-EEEECCCCEEEEEEC
Confidence 111222331 133 455788999999999
No 210
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.99 E-value=2.7e-05 Score=62.48 Aligned_cols=77 Identities=12% Similarity=0.001 Sum_probs=51.8
Q ss_pred CCEEEEEecCCCCCCCEEEEEeC-----CCcEEEEECCCcccccceeee-eecccCcCcEEEEEEcCCCCCEEEEEc---
Q psy6415 29 NGVCGVDFDRRDIPMNKLVATTL-----EAKLFVFDLKTLHREKGFAYL-SEKAHKATTVWAAKHLPQNRDLFVTCG--- 99 (174)
Q Consensus 29 ~~V~sv~f~~~~~~~~~l~s~s~-----Dg~I~iWD~~~~~~~~~~~~~-~~~~h~~~~i~~v~fsP~~~~~las~s--- 99 (174)
..+.+|+|++++ +.+++-+. +..|.+||+++.+..+.+... ....+.. .++.+++.|+++.++++-.
T Consensus 67 ~~p~gv~~d~~g---~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~-~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 67 DTVLGIKSDGNG---IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNS-FVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp SCEEEEEECSSS---EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTC-CCCEEEEETTTTEEEEEECCSG
T ss_pred eEeeEEEEcCCC---cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhccccc-ccceEEEecCCCEEEEEcCccC
Confidence 568999999863 44454433 689999999876533222110 0011223 5689999986667778877
Q ss_pred CCCcEEEEec
Q psy6415 100 GSGSLNLWQL 109 (174)
Q Consensus 100 ~Dg~V~lWd~ 109 (174)
.++.|.+||+
T Consensus 143 ~~~~i~v~d~ 152 (343)
T 2qe8_A 143 DKAALIRVDL 152 (343)
T ss_dssp GGCEEEEEET
T ss_pred CCCeEEEEEC
Confidence 7899999999
No 211
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.99 E-value=0.00011 Score=60.83 Aligned_cols=103 Identities=11% Similarity=-0.025 Sum_probs=66.8
Q ss_pred EEEEecCC--cEEEEECCCCCeEEEe----e-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee
Q psy6415 2 VVAGYDNG--DLKMFDLKTMSLKWET----N-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE 74 (174)
Q Consensus 2 lasgs~Dg--~iklWDl~~~~~~~~~----~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~ 74 (174)
|+.+..++ .|.+||..++...... . ....+++++++|++ ..|..+..++.|+.||..+.... .+.....
T Consensus 185 l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~---g~lyv~d~~~~I~~~d~~~~~~~-~~~~~~~ 260 (409)
T 3hrp_A 185 VYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETE---EWLYFVDSNKNFGRFNVKTQEVT-LIKQLEL 260 (409)
T ss_dssp EEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTS---SEEEEECTTCEEEEEETTTCCEE-EEEECCC
T ss_pred EEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCC---CeEEEEECCCcEEEEECCCCCEE-EEecccc
Confidence 44555545 7888888766543222 2 23557889999953 45555778899999999875421 1100001
Q ss_pred cccCcCcE--EEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 75 KAHKATTV--WAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 75 ~~h~~~~i--~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.++.. .- ..++|+|.++.++++-..+++|+.|+.
T Consensus 261 ~g~~~-~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~ 296 (409)
T 3hrp_A 261 SGSLG-TNPGPYLIYYFVDSNFYMSDQNLSSVYKITP 296 (409)
T ss_dssp CSCCC-CSSCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred cCCCC-CCccccEEEeCCCCEEEEEeCCCCEEEEEec
Confidence 12222 22 389999977889999999999999998
No 212
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.93 E-value=0.00021 Score=56.93 Aligned_cols=97 Identities=12% Similarity=0.052 Sum_probs=61.2
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec-cc-Cc
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK-AH-KA 79 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~-~h-~~ 79 (174)
++++..++.|..||.++++... ......+.+++|+|++ +.++ ++.+ .|.+||.++.+... +.... .. ..
T Consensus 64 ~~~d~~~~~i~~~d~~~~~~~~-~~~~~~v~~i~~~~dg---~l~v-~~~~-gl~~~d~~~g~~~~---~~~~~~~~~~~ 134 (326)
T 2ghs_A 64 WWFNILERELHELHLASGRKTV-HALPFMGSALAKISDS---KQLI-ASDD-GLFLRDTATGVLTL---HAELESDLPGN 134 (326)
T ss_dssp EEEEGGGTEEEEEETTTTEEEE-EECSSCEEEEEEEETT---EEEE-EETT-EEEEEETTTCCEEE---EECSSTTCTTE
T ss_pred EEEECCCCEEEEEECCCCcEEE-EECCCcceEEEEeCCC---eEEE-EECC-CEEEEECCCCcEEE---EeeCCCCCCCC
Confidence 4566678899999998876543 2345679999999863 5555 4444 49999988754221 11111 11 23
Q ss_pred CcEEEEEEcCCCCCEEEEEcCC----CcEEEEec
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGS----GSLNLWQL 109 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~D----g~V~lWd~ 109 (174)
.++.++++|++ .++++...+ +...||.+
T Consensus 135 -~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~ 166 (326)
T 2ghs_A 135 -RSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHV 166 (326)
T ss_dssp -EEEEEEECTTS-CEEEEEEETTCCTTCEEEEEE
T ss_pred -CCCCEEECCCC-CEEEEeCCCcCCCCceEEEEE
Confidence 58999999954 566655322 34566666
No 213
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.93 E-value=3.1e-05 Score=68.14 Aligned_cols=99 Identities=11% Similarity=0.174 Sum_probs=63.9
Q ss_pred EecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCc-------------EEEEECCCcccccceee
Q psy6415 5 GYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAK-------------LFVFDLKTLHREKGFAY 71 (174)
Q Consensus 5 gs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~-------------I~iWD~~~~~~~~~~~~ 71 (174)
|+++.+|++||+.+++.+..........+++|+ ++ +.|+.++.|.. |++|++.+..... ..+
T Consensus 151 G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg---~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-~~v 225 (693)
T 3iuj_A 151 GSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GN---EGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDD-RLV 225 (693)
T ss_dssp SCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TT---TEEEEEESSCCC-------CCCCEEEEEETTSCGGGC-EEE
T ss_pred CCceEEEEEEECCCCCCCccccCCceeccEEEe-CC---CEEEEEEecCcccccccccCCCcEEEEEECCCCcccc-eEE
Confidence 444568999999999865431111112467898 74 78888887744 9999998754321 122
Q ss_pred eeecc-cCcCcEEEEEEcCCCCCEEEEEcC---CCcEEEEec
Q psy6415 72 LSEKA-HKATTVWAAKHLPQNRDLFVTCGG---SGSLNLWQL 109 (174)
Q Consensus 72 ~~~~~-h~~~~i~~v~fsP~~~~~las~s~---Dg~V~lWd~ 109 (174)
..... |.. .+.++.|+|++..++++.+. +..|.+||+
T Consensus 226 ~~~~~~~~~-~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~ 266 (693)
T 3iuj_A 226 FGAIPAQHH-RYVGATVTEDDRFLLISAANSTSGNRLYVKDL 266 (693)
T ss_dssp ESCSGGGCC-SEEEEEECTTSCEEEEEEESSSSCCEEEEEET
T ss_pred EecCCCCCe-EEEEEEEcCCCCEEEEEEccCCCCcEEEEEEC
Confidence 23333 444 57899999976656555543 358999998
No 214
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.85 E-value=0.0017 Score=49.53 Aligned_cols=96 Identities=8% Similarity=-0.065 Sum_probs=66.1
Q ss_pred EEEecCCcEEEEECCCCCeEEE-ee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 3 VAGYDNGDLKMFDLKTMSLKWE-TN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 3 asgs~Dg~iklWDl~~~~~~~~-~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
++...++.|.+||.. ++.... .. ....+.+|++++++ +.+++...++.|..||.. .+.. .........
T Consensus 35 v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g---~l~v~~~~~~~v~~~d~~-g~~~----~~~~~~~~~- 104 (300)
T 2qc5_A 35 FTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLG---DIWFTENGANKIGKLSKK-GGFT----EYPLPQPDS- 104 (300)
T ss_dssp EEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS---CEEEEETTTTEEEEECTT-SCEE----EEECSSTTC-
T ss_pred EEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCC---CEEEEecCCCeEEEECCC-CCeE----EecCCCCCC-
Confidence 344457889999988 655432 11 23568999999863 666776678899999987 3321 112222334
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+..+++.| ++.++++...++.|..||.
T Consensus 105 ~~~~i~~~~-~g~l~v~~~~~~~i~~~~~ 132 (300)
T 2qc5_A 105 GPYGITEGL-NGDIWFTQLNGDRIGKLTA 132 (300)
T ss_dssp CEEEEEECS-TTCEEEEETTTTEEEEECT
T ss_pred CCccceECC-CCCEEEEccCCCeEEEECC
Confidence 689999999 4578888887889999988
No 215
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.85 E-value=8.3e-05 Score=65.73 Aligned_cols=50 Identities=10% Similarity=0.071 Sum_probs=32.9
Q ss_pred CCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 52 EAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 52 Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
+|+|+.||+++++.+ .....+ . +++...+... +.+++.|+.||.|+.||.
T Consensus 454 ~g~l~A~D~~tG~~~-----W~~~~~-~-~~~~g~~~ta-gglvf~gt~dg~l~a~D~ 503 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAA-----WEVPYV-T-IFNGGTLSTA-GNLVFEGSADGRVIAYAA 503 (689)
T ss_dssp EEEEEEEETTTTEEE-----EEEEES-S-SCCCCEEEET-TTEEEEECTTSEEEEEET
T ss_pred ceeEEEEECCCCCeE-----eEccCC-C-CccCccceEC-CCEEEEECCCCcEEEEEC
Confidence 478999999887532 122122 2 3444445553 457777999999999999
No 216
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.82 E-value=0.00011 Score=60.86 Aligned_cols=99 Identities=10% Similarity=-0.023 Sum_probs=65.6
Q ss_pred CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEe----------CCCcEEEEECCCcccccceeeee-ecc
Q psy6415 8 NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATT----------LEAKLFVFDLKTLHREKGFAYLS-EKA 76 (174)
Q Consensus 8 Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s----------~Dg~I~iWD~~~~~~~~~~~~~~-~~~ 76 (174)
+++|.+.|..+++.+........-. ++++|++ ..|..++ .+++|.+||..+.+......+.. -+.
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG---~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~ 133 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDG---SFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRF 133 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSSCE-EEECTTS---SCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCC
T ss_pred CCEEEEEECCCCeEEEEEECCCCCc-EEECCCC---CEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcccc
Confidence 6899999999998876654333334 9999975 6665443 47889999999876443221100 000
Q ss_pred -cCcCcEEEEEEcCCCCCEEEEEc-CCCcEEEEeccc
Q psy6415 77 -HKATTVWAAKHLPQNRDLFVTCG-GSGSLNLWQLVS 111 (174)
Q Consensus 77 -h~~~~i~~v~fsP~~~~~las~s-~Dg~V~lWd~~~ 111 (174)
... .-+.++|+|++..++++.. .+++|.++|+++
T Consensus 134 ~~g~-~P~~~a~spDGk~lyVan~~~~~~VsVID~~t 169 (386)
T 3sjl_D 134 LVGT-YPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEG 169 (386)
T ss_dssp CBSC-CGGGEEECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred ccCC-CCceEEEcCCCCEEEEEEcCCCCeEEEEECCC
Confidence 001 2357899997766666654 378999999954
No 217
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.81 E-value=5.3e-05 Score=66.86 Aligned_cols=97 Identities=11% Similarity=0.126 Sum_probs=65.0
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecCC------------CE------------------------EEEEecCCCCCCCE
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLKN------------GV------------------------CGVDFDRRDIPMNK 45 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~~------------~V------------------------~sv~f~~~~~~~~~ 45 (174)
|+.++.+|.|.++|.++|+++....... .+ .+++|+|+. ..
T Consensus 330 l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~---~~ 406 (677)
T 1kb0_A 330 ILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT---GL 406 (677)
T ss_dssp EEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT---TE
T ss_pred EEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCC---CE
Confidence 6778899999999999999876543210 01 146788863 55
Q ss_pred EEEEeC-------------------------------------------CCcEEEEECCCcccccceeeeeecccCcCcE
Q psy6415 46 LVATTL-------------------------------------------EAKLFVFDLKTLHREKGFAYLSEKAHKATTV 82 (174)
Q Consensus 46 l~s~s~-------------------------------------------Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i 82 (174)
+.+.+. .+.|..||+++++.+ ... .+.. ++
T Consensus 407 ~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~-----W~~-~~~~-~~ 479 (677)
T 1kb0_A 407 VYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAA-----WSV-EHVS-PW 479 (677)
T ss_dssp EEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEE-----EEE-EESS-SC
T ss_pred EEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEE-----eec-CCCC-CC
Confidence 555432 278999999887532 121 1223 45
Q ss_pred EEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 83 WAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 83 ~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
+...+.+.+ .+++.++.||.|++||.
T Consensus 480 ~~g~~~~~g-~~v~~g~~dg~l~a~D~ 505 (677)
T 1kb0_A 480 NGGTLTTAG-NVVFQGTADGRLVAYHA 505 (677)
T ss_dssp CCCEEEETT-TEEEEECTTSEEEEEET
T ss_pred cCcceEeCC-CEEEEECCCCcEEEEEC
Confidence 555566644 46666899999999999
No 218
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.78 E-value=0.0025 Score=48.52 Aligned_cols=96 Identities=4% Similarity=-0.125 Sum_probs=65.1
Q ss_pred EEEecCCcEEEEECCCCCeEEE-ee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 3 VAGYDNGDLKMFDLKTMSLKWE-TN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 3 asgs~Dg~iklWDl~~~~~~~~-~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
++...++.|..+|.. ++.... .. ....++++++++++ +..++...++.|..+|. +.+.. ......+..
T Consensus 119 v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g---~l~v~~~~~~~i~~~~~-~g~~~----~~~~~~~~~- 188 (300)
T 2qc5_A 119 FTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDN---ALWFTENQNNSIGRITN-TGKLE----EYPLPTNAA- 188 (300)
T ss_dssp EEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS---SEEEEETTTTEEEEECT-TCCEE----EEECSSTTC-
T ss_pred EEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCC---CEEEEecCCCeEEEECC-CCcEE----EeeCCCCCC-
Confidence 344447788889887 555422 22 23568999999864 66666667889999998 33321 111223334
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+..+++.| ++.++++....+.|..||.
T Consensus 189 ~~~~i~~d~-~g~l~v~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 189 APVGITSGN-DGALWFVEIMGNKIGRITT 216 (300)
T ss_dssp CEEEEEECT-TSSEEEEETTTTEEEEECT
T ss_pred CcceEEECC-CCCEEEEccCCCEEEEEcC
Confidence 688999999 4578888877888999987
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.75 E-value=0.00025 Score=55.65 Aligned_cols=91 Identities=9% Similarity=0.033 Sum_probs=53.6
Q ss_pred CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCC------CcEEEEECCCcccccceeeeeecccCcCcE
Q psy6415 9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLE------AKLFVFDLKTLHREKGFAYLSEKAHKATTV 82 (174)
Q Consensus 9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D------g~I~iWD~~~~~~~~~~~~~~~~~h~~~~i 82 (174)
+.|..||.++++..... .....+.++|+|++ +.|..+... +.|.+||+.... ....... ...... ..
T Consensus 169 ~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg---~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~-~~~~~~-~p 241 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDE---QTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHF-ASVPDG-LP 241 (305)
T ss_dssp EEEEEECSSSCCCEEEE-EESSEEEEEECTTS---SEEEEEECCC---CCCEEEEEEEETTE-EEEEEEE-ECCSSS-CC
T ss_pred CeEEEEcCCCCcEEEEe-cCCCCcceEEcCCC---CEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEE-EECCCC-CC
Confidence 45677777666654333 33457889999974 666665544 789999987542 1100000 011122 34
Q ss_pred EEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 83 WAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 83 ~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
..+++.++ +.+.+++ .+| |.+|+.
T Consensus 242 dgi~~d~~-G~lwv~~-~~g-v~~~~~ 265 (305)
T 3dr2_A 242 DGFCVDRG-GWLWSSS-GTG-VCVFDS 265 (305)
T ss_dssp CSEEECTT-SCEEECC-SSE-EEEECT
T ss_pred CeEEECCC-CCEEEec-CCc-EEEECC
Confidence 56788885 4565544 454 888887
No 220
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.71 E-value=5.9e-05 Score=66.30 Aligned_cols=68 Identities=13% Similarity=0.122 Sum_probs=44.1
Q ss_pred CEEEEEecCCCCCCCEEEEE-----eCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCc-
Q psy6415 30 GVCGVDFDRRDIPMNKLVAT-----TLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGS- 103 (174)
Q Consensus 30 ~V~sv~f~~~~~~~~~l~s~-----s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~- 103 (174)
.+.+++|||++ ++||.+ +++.+|++||+.+++.+.. .+... ...+++|+ ++. .|+.++.|..
T Consensus 130 ~l~~~~~SpDg---~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~----~~~~~---k~~~~~Ws-Dg~-~l~y~~~~~~~ 197 (693)
T 3iuj_A 130 ALDQLSFSRDG---RILAYSLSLAGSDWREIHLMDVESKQPLET----PLKDV---KFSGISWL-GNE-GFFYSSYDKPD 197 (693)
T ss_dssp EEEEEEECTTS---SEEEEEEECSSCCEEEEEEEETTTCSEEEE----EEEEE---ESCCCEEE-TTT-EEEEEESSCCC
T ss_pred EEEEEEECCCC---CEEEEEEecCCCceEEEEEEECCCCCCCcc----ccCCc---eeccEEEe-CCC-EEEEEEecCcc
Confidence 47888999974 788743 3446899999998764311 11111 12467899 654 5566666643
Q ss_pred ------------EEEEec
Q psy6415 104 ------------LNLWQL 109 (174)
Q Consensus 104 ------------V~lWd~ 109 (174)
|++|++
T Consensus 198 ~~~~~~~~~~~~v~~~~l 215 (693)
T 3iuj_A 198 GSELSARTDQHKVYFHRL 215 (693)
T ss_dssp -------CCCCEEEEEET
T ss_pred cccccccCCCcEEEEEEC
Confidence 889988
No 221
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.71 E-value=0.00036 Score=57.83 Aligned_cols=96 Identities=17% Similarity=0.171 Sum_probs=63.3
Q ss_pred EEecCCcEEEEECCCCCeEEE--ee-----------cCCCEEEEEecCCCCCCCEEEEEeC----------CCcEEEEEC
Q psy6415 4 AGYDNGDLKMFDLKTMSLKWE--TN-----------LKNGVCGVDFDRRDIPMNKLVATTL----------EAKLFVFDL 60 (174)
Q Consensus 4 sgs~Dg~iklWDl~~~~~~~~--~~-----------~~~~V~sv~f~~~~~~~~~l~s~s~----------Dg~I~iWD~ 60 (174)
-.+.+|+|.+.|+.+...... .. ...+..-++++|++ +.|..+.. .+.|-+.|+
T Consensus 242 ~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~---~~lyV~~~~~~~~~hk~~~~~V~viD~ 318 (386)
T 3sjl_D 242 WPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL---DRIYLLVDQRDEWRHKTASRFVVVLDA 318 (386)
T ss_dssp EEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTT---TEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred EEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCC---CeEEEEeccccccccCCCCCEEEEEEC
Confidence 355678999999977653211 11 02233457778864 66554421 367999999
Q ss_pred CCcccccceeeeeecccCcCcEEEEEEcCCCC-CEEEEEcCCCcEEEEec
Q psy6415 61 KTLHREKGFAYLSEKAHKATTVWAAKHLPQNR-DLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 61 ~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~-~~las~s~Dg~V~lWd~ 109 (174)
++.+.++.+.+ + . .+|+++|+|++. .++++...+++|.++|.
T Consensus 319 ~t~kv~~~i~v----g--~-~~~~lavs~D~~~~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 319 KTGERLAKFEM----G--H-EIDSINVSQDEKPLLYALSTGDKTLYIHDA 361 (386)
T ss_dssp TTCCEEEEEEE----E--E-EECEEEECSSSSCEEEEEETTTTEEEEEET
T ss_pred CCCeEEEEEEC----C--C-CcceEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 99775543321 2 3 689999999765 35666777999999999
No 222
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.61 E-value=0.00083 Score=56.80 Aligned_cols=98 Identities=10% Similarity=0.099 Sum_probs=63.6
Q ss_pred cCCcEEEEECCCCCeEEEeecC---CCEEEEEe--cCCCCCCCEE-EEEe-----CCCcEEEEECCCcccccceeeeeec
Q psy6415 7 DNGDLKMFDLKTMSLKWETNLK---NGVCGVDF--DRRDIPMNKL-VATT-----LEAKLFVFDLKTLHREKGFAYLSEK 75 (174)
Q Consensus 7 ~Dg~iklWDl~~~~~~~~~~~~---~~V~sv~f--~~~~~~~~~l-~s~s-----~Dg~I~iWD~~~~~~~~~~~~~~~~ 75 (174)
.+.+|.+||+.+++........ .....|.| +|++ ..+ +++- .+++|-+|....+.... .....+.
T Consensus 226 ~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg---~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~-~~vIdi~ 301 (462)
T 2ece_A 226 YGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTK---LMGFINMVVSLKDLSSSIWLWFYEDGKWNA-EKVIEIP 301 (462)
T ss_dssp SCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTC---CEEEEEEEEETTTCCEEEEEEEEETTEEEE-EEEEEEC
T ss_pred cCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCC---CEEEEEEeeeccCCCceEEEEEecCCceeE-EEEEeCC
Confidence 3789999999988776665442 23444545 9874 554 4555 78899877665422100 0000000
Q ss_pred cc----------------CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 76 AH----------------KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 76 ~h----------------~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.. .. ....|.+||+++.+++|.-..+.|.++|+
T Consensus 302 ~~~v~~~lp~~~~~f~~~~~-~pa~I~lS~DGrfLYVSnrg~d~VavfdV 350 (462)
T 2ece_A 302 AEPLEGNLPEILKPFKAVPP-LVTDIDISLDDKFLYLSLWGIGEVRQYDI 350 (462)
T ss_dssp CEECCSSCCGGGGGGTEECC-CCCCEEECTTSCEEEEEETTTTEEEEEEC
T ss_pred CccccccccccccccccCCC-ceeEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 00 12 45788999998889999999999999999
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.46 E-value=0.0015 Score=52.20 Aligned_cols=97 Identities=13% Similarity=0.105 Sum_probs=60.8
Q ss_pred cCCcEEEEECCCCCeEEEeec------------------------------CCCEEEEEecCCCCCCCEEEEEeCCCcEE
Q psy6415 7 DNGDLKMFDLKTMSLKWETNL------------------------------KNGVCGVDFDRRDIPMNKLVATTLEAKLF 56 (174)
Q Consensus 7 ~Dg~iklWDl~~~~~~~~~~~------------------------------~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~ 56 (174)
.++.|.+||+.+++....... ...++.|+|+|++ +.|..+..++. +
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg---~~ly~~~~~~~-~ 218 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAEN---EWLYLSPMHST-S 218 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTS---CEEEEEESSCS-E
T ss_pred CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCC---CEEEEEeCCCC-e
Confidence 678999999988765443211 1246899999974 77877766664 5
Q ss_pred EEECCCccc----c--cc-eeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 57 VFDLKTLHR----E--KG-FAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 57 iWD~~~~~~----~--~~-~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
||.+..... . .. +......++.. ....+++.|+ +.++++...++.|.+||.
T Consensus 219 l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g-~pdgia~d~~-G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 219 MYRIKSADLSNLQLTDAELGSKIERYSEKP-ICDGISIDKD-HNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp EEEEEHHHHTCTTCCHHHHHTTCEEEEECC-SCSCEEECTT-CCEEEEEGGGTEEEEEET
T ss_pred EEEEEHHHhcCCCCChhhhhcceEecccCC-CCceEEECCC-CCEEEEccCCCeEEEEEC
Confidence 555432100 0 00 00001112333 4457889994 689999999999999998
No 224
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.44 E-value=0.00087 Score=56.17 Aligned_cols=98 Identities=12% Similarity=-0.002 Sum_probs=64.4
Q ss_pred CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEe----------CCCcEEEEECCCcccccceeeeeecc--
Q psy6415 9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATT----------LEAKLFVFDLKTLHREKGFAYLSEKA-- 76 (174)
Q Consensus 9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s----------~Dg~I~iWD~~~~~~~~~~~~~~~~~-- 76 (174)
++|.+.|+.+++.+........- .|+++|++ +.|..+. .++.|.++|..+.+......+.....
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P-gia~SpDg---k~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~ 174 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP-HPVAAEDG---SFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFL 174 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC-EEEECTTS---SCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCC
T ss_pred CeEEEEECCCCEEEEEEECCCCC-ceEECCCC---CEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccc
Confidence 79999999999987765533333 89999975 6665543 47899999999876443221100000
Q ss_pred cCcCcEEEEEEcCCCCCEEEEEcC-CCcEEEEeccc
Q psy6415 77 HKATTVWAAKHLPQNRDLFVTCGG-SGSLNLWQLVS 111 (174)
Q Consensus 77 h~~~~i~~v~fsP~~~~~las~s~-Dg~V~lWd~~~ 111 (174)
... .-..++|+|+++.++++.-. +++|.+.|+++
T Consensus 175 ~g~-~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t 209 (426)
T 3c75_H 175 VGT-YQWMNALTPDNKNLLFYQFSPAPAVGVVDLEG 209 (426)
T ss_dssp BSC-CGGGSEECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred cCC-CcceEEEcCCCCEEEEEecCCCCeEEEEECCC
Confidence 011 23467899976666665443 68999999943
No 225
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.37 E-value=0.002 Score=52.67 Aligned_cols=96 Identities=14% Similarity=0.039 Sum_probs=61.6
Q ss_pred cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEe----------CCCcEEEEECCCcccccceeee-eecc-c
Q psy6415 10 DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATT----------LEAKLFVFDLKTLHREKGFAYL-SEKA-H 77 (174)
Q Consensus 10 ~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s----------~Dg~I~iWD~~~~~~~~~~~~~-~~~~-h 77 (174)
+|.++|..+++.+........- .++|+|++ +.|..+. .++.|.+||..+.+......+. .... +
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg---~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~ 123 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP-NPVAAHSG---SEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDV 123 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC-CeEECCCC---CEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCcccccc
Confidence 8899999999877555433333 89999975 7776654 4788999999876543222110 0000 0
Q ss_pred CcCcEEEEEEcCCCCCEEEEEcC-CCcEEEEeccc
Q psy6415 78 KATTVWAAKHLPQNRDLFVTCGG-SGSLNLWQLVS 111 (174)
Q Consensus 78 ~~~~i~~v~fsP~~~~~las~s~-Dg~V~lWd~~~ 111 (174)
.. .-..++|+|+++.++++... +++|.++| ++
T Consensus 124 g~-~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t 156 (373)
T 2mad_H 124 GP-YSWMNANTPNNADLLFFQFAAGPAVGLVV-QG 156 (373)
T ss_pred CC-CccceEECCCCCEEEEEecCCCCeEEEEE-CC
Confidence 11 23578999976655554433 58899999 76
No 226
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.29 E-value=0.00088 Score=58.36 Aligned_cols=97 Identities=13% Similarity=0.165 Sum_probs=65.7
Q ss_pred CcEEEEECCC--CCe-EEEeecCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccc-------cceeeeeeccc
Q psy6415 9 GDLKMFDLKT--MSL-KWETNLKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHRE-------KGFAYLSEKAH 77 (174)
Q Consensus 9 g~iklWDl~~--~~~-~~~~~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~-------~~~~~~~~~~h 77 (174)
+.|.+.|.++ ++. +..........++.++|++ .++ +++-.+.+|.++|+++.+.. ..........-
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDG---k~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG 330 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDK---KHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG 330 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTS---SEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC
T ss_pred CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCC---CEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC
Confidence 4599999988 544 3344334456678999985 654 56668999999999964210 00001111111
Q ss_pred CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415 78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS 111 (174)
Q Consensus 78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~ 111 (174)
. .-+.++|+|++ ..+.+.-.|++|..||+++
T Consensus 331 -~-gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 331 -L-GPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp -S-CEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred -C-CcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 2 46899999966 7888999999999999944
No 227
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.27 E-value=0.0027 Score=53.67 Aligned_cols=94 Identities=15% Similarity=0.195 Sum_probs=63.1
Q ss_pred CcEEEEECCCCCeEEEeecC---CC-EEEEEecCCCCCCCEEEEEe-------------------CCCcEEEEECCCccc
Q psy6415 9 GDLKMFDLKTMSLKWETNLK---NG-VCGVDFDRRDIPMNKLVATT-------------------LEAKLFVFDLKTLHR 65 (174)
Q Consensus 9 g~iklWDl~~~~~~~~~~~~---~~-V~sv~f~~~~~~~~~l~s~s-------------------~Dg~I~iWD~~~~~~ 65 (174)
|.|-+.|.++.+++...... .. -+.+.|+|+. +.++++. .+.+|.+||+.+.+.
T Consensus 164 g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~---~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~ 240 (462)
T 2ece_A 164 GGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPN---EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR 240 (462)
T ss_dssp CEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTT---TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE
T ss_pred CeEEEEECCCCeEEEEEccCCCCccccceEEECCCC---CEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE
Confidence 78999999999987665321 11 2346779974 7777774 478999999987543
Q ss_pred ccceeeeeecccCcCcEEEEEE--cCCCCCEEEEEc-----CCCcEEEEec
Q psy6415 66 EKGFAYLSEKAHKATTVWAAKH--LPQNRDLFVTCG-----GSGSLNLWQL 109 (174)
Q Consensus 66 ~~~~~~~~~~~h~~~~i~~v~f--sP~~~~~las~s-----~Dg~V~lWd~ 109 (174)
.+.+. . +..+..-..++| +|++...++++- .+++|.+|..
T Consensus 241 ~~tI~---v-g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~ 287 (462)
T 2ece_A 241 IHSLT---L-GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFY 287 (462)
T ss_dssp EEEEE---S-CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEE
T ss_pred eeEEe---c-CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEe
Confidence 32211 1 111103345656 997777777777 8889998887
No 228
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.20 E-value=0.011 Score=46.42 Aligned_cols=97 Identities=10% Similarity=-0.007 Sum_probs=63.0
Q ss_pred EecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415 5 GYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWA 84 (174)
Q Consensus 5 gs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~ 84 (174)
.-.++.+.++|.++.+.+..+.....=..++++ +..|..+..+++|.++|.++.+......+.. .+..-..++.
T Consensus 112 tw~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt~D-----g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~-~g~~v~~lNe 185 (268)
T 3nok_A 112 TWTEGLLFTWSGMPPQRERTTRYSGEGWGLCYW-----NGKLVRSDGGTMLTFHEPDGFALVGAVQVKL-RGQPVELINE 185 (268)
T ss_dssp ESSSCEEEEEETTTTEEEEEEECSSCCCCEEEE-----TTEEEEECSSSEEEEECTTTCCEEEEEECEE-TTEECCCEEE
T ss_pred EccCCEEEEEECCcCcEEEEEeCCCceeEEecC-----CCEEEEECCCCEEEEEcCCCCeEEEEEEeCC-CCcccccccc
Confidence 446889999999999887766543322345544 2677776679999999999876543322211 0101013567
Q ss_pred EEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 85 AKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 85 v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
+.|. ++.++|..-.+..|.+-|.
T Consensus 186 Le~~--dG~lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 186 LECA--NGVIYANIWHSSDVLEIDP 208 (268)
T ss_dssp EEEE--TTEEEEEETTCSEEEEECT
T ss_pred cEEe--CCEEEEEECCCCeEEEEeC
Confidence 7776 4568887777778888777
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.19 E-value=0.00044 Score=61.09 Aligned_cols=85 Identities=12% Similarity=0.103 Sum_probs=55.9
Q ss_pred CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEE
Q psy6415 8 NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKH 87 (174)
Q Consensus 8 Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~f 87 (174)
+|+|+.||+++++.++.......+.+-.+... +..+++|+.|+.|+.||.++++.+-.+.. .+.. ...-+.|
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~ta---gglvf~gt~dg~l~a~D~~tG~~lw~~~~----~~~~-~~~p~ty 525 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTA---GNLVFEGSADGRVIAYAADTGEKLWEQPA----ASGV-MAAPVTY 525 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEET---TTEEEEECTTSEEEEEETTTCCEEEEEEC----SSCC-CSCCEEE
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceEC---CCEEEEECCCCcEEEEECCCCccceeeeC----CCCc-ccCceEE
Confidence 58899999999999887665443333233332 37889999999999999999875432211 1111 1234567
Q ss_pred cCCCCCEEEEEcC
Q psy6415 88 LPQNRDLFVTCGG 100 (174)
Q Consensus 88 sP~~~~~las~s~ 100 (174)
.+++.++++..+.
T Consensus 526 ~~~G~qyv~~~~G 538 (689)
T 1yiq_A 526 SVDGEQYVTFMAG 538 (689)
T ss_dssp EETTEEEEEEEEC
T ss_pred EECCEEEEEEEec
Confidence 7766666666554
No 230
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.16 E-value=0.0098 Score=46.14 Aligned_cols=97 Identities=12% Similarity=0.083 Sum_probs=61.8
Q ss_pred EecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415 5 GYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWA 84 (174)
Q Consensus 5 gs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~ 84 (174)
.-.++.+.++|.++.+.+.++.....=..++.+ +..|..+..++.|.++|.++.+..+...+.. .+..-..++.
T Consensus 81 tw~~~~v~v~D~~tl~~~~ti~~~~~Gwglt~d-----g~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~-~g~~~~~lNe 154 (243)
T 3mbr_X 81 TWRNHEGFVYDLATLTPRARFRYPGEGWALTSD-----DSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA-GGRPLDNLNE 154 (243)
T ss_dssp ESSSSEEEEEETTTTEEEEEEECSSCCCEEEEC-----SSCEEEECSSSEEEEECTTTCCEEEEEECEE-TTEECCCEEE
T ss_pred EeeCCEEEEEECCcCcEEEEEeCCCCceEEeeC-----CCEEEEECCCCeEEEEeCCCCeEEEEEEEcc-CCccccccee
Confidence 445889999999999887766543322455543 2556666678999999999876443322211 1111013566
Q ss_pred EEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 85 AKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 85 v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
+.+. ++.++|..-.+..|.+-|.
T Consensus 155 Le~~--~G~lyanvw~s~~I~vIDp 177 (243)
T 3mbr_X 155 LEWV--NGELLANVWLTSRIARIDP 177 (243)
T ss_dssp EEEE--TTEEEEEETTTTEEEEECT
T ss_pred eEEe--CCEEEEEECCCCeEEEEEC
Confidence 6665 4568887766778888887
No 231
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.14 E-value=0.029 Score=42.64 Aligned_cols=98 Identities=8% Similarity=-0.016 Sum_probs=61.8
Q ss_pred EEecCCcEEEEECCCCCeEEEeec-CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcE
Q psy6415 4 AGYDNGDLKMFDLKTMSLKWETNL-KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTV 82 (174)
Q Consensus 4 sgs~Dg~iklWDl~~~~~~~~~~~-~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i 82 (174)
+-..++.|..+|+.++........ ......|+++|.+ +..+++-...+.|.++|+...... . + ....-. .-
T Consensus 53 ~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~--~~lyv~d~~~~~I~~~~~~g~~~~-~--~--~~~~~~-~P 124 (267)
T 1npe_A 53 TDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLG--RTIFWTDSQLDRIEVAKMDGTQRR-V--L--FDTGLV-NP 124 (267)
T ss_dssp EETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTT--TEEEEEETTTTEEEEEETTSCSCE-E--E--ECSSCS-SE
T ss_pred EECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecC--CeEEEEECCCCEEEEEEcCCCCEE-E--E--EECCCC-Cc
Confidence 344567788888876554322222 2467899999853 244566667889999998753211 1 1 111112 45
Q ss_pred EEEEEcCCCCCEEEEEcC--CCcEEEEec
Q psy6415 83 WAAKHLPQNRDLFVTCGG--SGSLNLWQL 109 (174)
Q Consensus 83 ~~v~fsP~~~~~las~s~--Dg~V~lWd~ 109 (174)
+.++++|+++.++++... .+.|..+++
T Consensus 125 ~~i~vd~~~g~lyv~~~~~~~~~I~~~~~ 153 (267)
T 1npe_A 125 RGIVTDPVRGNLYWTDWNRDNPKIETSHM 153 (267)
T ss_dssp EEEEEETTTTEEEEEECCSSSCEEEEEET
T ss_pred cEEEEeeCCCEEEEEECCCCCcEEEEEec
Confidence 899999976777777654 478888887
No 232
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.14 E-value=0.011 Score=46.51 Aligned_cols=98 Identities=11% Similarity=0.064 Sum_probs=63.1
Q ss_pred EEecCCcEEEEECCCCCeEEEeecC-CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcE
Q psy6415 4 AGYDNGDLKMFDLKTMSLKWETNLK-NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTV 82 (174)
Q Consensus 4 sgs~Dg~iklWDl~~~~~~~~~~~~-~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i 82 (174)
+.-.++.|.++|..+.+.+..+... ..=..++. ++ ..|..+..+++|.++|.++.+......+.. .+..-..+
T Consensus 81 ~t~~~~~v~viD~~t~~v~~~i~~g~~~g~glt~--Dg---~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~-~~~p~~~~ 154 (266)
T 2iwa_A 81 VVWLKNIGFIYDRRTLSNIKNFTHQMKDGWGLAT--DG---KILYGSDGTSILYEIDPHTFKLIKKHNVKY-NGHRVIRL 154 (266)
T ss_dssp EETTCSEEEEEETTTTEEEEEEECCSSSCCEEEE--CS---SSEEEECSSSEEEEECTTTCCEEEEEECEE-TTEECCCE
T ss_pred EEecCCEEEEEECCCCcEEEEEECCCCCeEEEEE--CC---CEEEEECCCCeEEEEECCCCcEEEEEEECC-CCcccccc
Confidence 3446889999999998877665432 11133444 32 556666678999999998866443322211 01111036
Q ss_pred EEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 83 WAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 83 ~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
+.+.|. ++.++|+...++.|.+-|.
T Consensus 155 nele~~--dg~lyvn~~~~~~V~vID~ 179 (266)
T 2iwa_A 155 NELEYI--NGEVWANIWQTDCIARISA 179 (266)
T ss_dssp EEEEEE--TTEEEEEETTSSEEEEEET
T ss_pred eeEEEE--CCEEEEecCCCCeEEEEEC
Confidence 788888 3578888878889999888
No 233
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.13 E-value=0.011 Score=46.44 Aligned_cols=97 Identities=9% Similarity=0.129 Sum_probs=62.3
Q ss_pred EecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415 5 GYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWA 84 (174)
Q Consensus 5 gs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~ 84 (174)
.-.++.+.++|.++.+.+..+.....=..++++ +..|+.+..+++|.++|.++.+......+.. .+..-..++.
T Consensus 103 tw~~~~v~v~D~~t~~~~~ti~~~~eG~glt~d-----g~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~-~g~~~~~lNE 176 (262)
T 3nol_A 103 TWKNGLGFVWNIRNLRQVRSFNYDGEGWGLTHN-----DQYLIMSDGTPVLRFLDPESLTPVRTITVTA-HGEELPELNE 176 (262)
T ss_dssp ESSSSEEEEEETTTCCEEEEEECSSCCCCEEEC-----SSCEEECCSSSEEEEECTTTCSEEEEEECEE-TTEECCCEEE
T ss_pred EeeCCEEEEEECccCcEEEEEECCCCceEEecC-----CCEEEEECCCCeEEEEcCCCCeEEEEEEecc-CCccccccce
Confidence 345889999999999887766543222344443 2556666668899999999876443322211 1111114567
Q ss_pred EEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 85 AKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 85 v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
+.|. ++.++|..-.+..|.+-|.
T Consensus 177 Le~~--~G~lyan~w~~~~I~vIDp 199 (262)
T 3nol_A 177 LEWV--DGEIFANVWQTNKIVRIDP 199 (262)
T ss_dssp EEEE--TTEEEEEETTSSEEEEECT
T ss_pred eEEE--CCEEEEEEccCCeEEEEEC
Confidence 7776 4578888777888888888
No 234
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.99 E-value=0.0068 Score=49.68 Aligned_cols=66 Identities=6% Similarity=-0.049 Sum_probs=46.6
Q ss_pred EEecCCCCCCCEEEEE-e---C-----CCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEc-CCCc
Q psy6415 34 VDFDRRDIPMNKLVAT-T---L-----EAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCG-GSGS 103 (174)
Q Consensus 34 v~f~~~~~~~~~l~s~-s---~-----Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s-~Dg~ 103 (174)
++|+|++ +.+..+ . . ++.+.++|+.+.+.+..+ ... . ..+.++|+|++..+|+++. .+++
T Consensus 269 v~~s~dg---~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i-----~vg-~-~p~gi~~s~Dg~~l~va~~~~~~~ 338 (368)
T 1mda_H 269 VAKLKNT---DGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPI-----SNG-H-DSDAIIAAQDGASDNYANSAGTEV 338 (368)
T ss_dssp EEEETTT---TEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECC-----EEE-E-EECEEEECCSSSCEEEEEETTTTE
T ss_pred eEEcCCC---CEEEEEeccccCcccccCCCEEEEECCCCeEEEEE-----ECC-C-CcceEEECCCCCEEEEEccCCCCe
Confidence 6788874 555543 3 2 235669999987644332 222 2 4689999997766888888 6999
Q ss_pred EEEEec
Q psy6415 104 LNLWQL 109 (174)
Q Consensus 104 V~lWd~ 109 (174)
|.++|+
T Consensus 339 VsVID~ 344 (368)
T 1mda_H 339 LDIYDA 344 (368)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 999999
No 235
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.97 E-value=0.0035 Score=51.40 Aligned_cols=96 Identities=9% Similarity=-0.135 Sum_probs=62.8
Q ss_pred cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEe----------CCCcEEEEECCCcccccceeeeeeccc--
Q psy6415 10 DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATT----------LEAKLFVFDLKTLHREKGFAYLSEKAH-- 77 (174)
Q Consensus 10 ~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s----------~Dg~I~iWD~~~~~~~~~~~~~~~~~h-- 77 (174)
+|.+.|..+++.+........- .++|+|++ ..+..+. .+++|.+||+.+.+......+.. ..+
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P-~i~~spDg---~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~-~~~~~ 121 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS-LAVAGHSG---SDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPD-APRFS 121 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC-EEEECTTS---SCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETT-SCSCC
T ss_pred eEEEEECCCCeEEEEEeCCCCC-ceEECCCC---CEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCC-ccccc
Confidence 7889999999987765432222 79999975 6665554 47899999999976543321100 000
Q ss_pred -CcCcEEEEEEcCCCCCEEEEEcC-CCcEEE--Eeccc
Q psy6415 78 -KATTVWAAKHLPQNRDLFVTCGG-SGSLNL--WQLVS 111 (174)
Q Consensus 78 -~~~~i~~v~fsP~~~~~las~s~-Dg~V~l--Wd~~~ 111 (174)
.. .-..++|+|+++.++++... +..|.+ +|.++
T Consensus 122 ~g~-~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 122 VGP-RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp BSC-CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred cCC-CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 01 23478899977666665433 467888 99855
No 236
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.96 E-value=0.011 Score=48.17 Aligned_cols=89 Identities=10% Similarity=-0.011 Sum_probs=61.6
Q ss_pred cCCcEEEEECCCCCeEEEeecC--------CCEEEEEecCCCCCCCEEEEEeC--CCcEEEEECCCcccccceeeee-ec
Q psy6415 7 DNGDLKMFDLKTMSLKWETNLK--------NGVCGVDFDRRDIPMNKLVATTL--EAKLFVFDLKTLHREKGFAYLS-EK 75 (174)
Q Consensus 7 ~Dg~iklWDl~~~~~~~~~~~~--------~~V~sv~f~~~~~~~~~l~s~s~--Dg~I~iWD~~~~~~~~~~~~~~-~~ 75 (174)
.+++|.+||+.+.+.+...... ..-..++|+|++ ++|+.+.. ++.|.++| .+.+... + +
T Consensus 95 ~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG---~~l~v~n~~~~~~v~viD-~t~~~~~-----~~i- 164 (373)
T 2mad_H 95 RTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNN---ADLLFFQFAAGPAVGLVV-QGGSSDD-----QLL- 164 (373)
T ss_pred CCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCC---CEEEEEecCCCCeEEEEE-CCCCEEe-----EEc-
Confidence 4788999999988776544321 224578999975 78877763 58899999 8865322 2 1
Q ss_pred ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 76 AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 76 ~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.-.. ++.+.|.++..+++.+.||++.++|.
T Consensus 165 ~~~~----~~~~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 165 SSPT----CYHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred CCCc----eEEEEeCCCceEEEEcCCCCEEEEEC
Confidence 1112 24566766677888889999888887
No 237
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.92 E-value=0.0078 Score=47.39 Aligned_cols=95 Identities=18% Similarity=0.203 Sum_probs=63.8
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecCCCEE--EEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVC--GVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA 79 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~--sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~ 79 (174)
.++.+.+|.|+..|+++++..... ...... .+++..+ ...++.-.++.+.++|.++.+.+..+. . ..
T Consensus 68 y~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~----~Ly~ltw~~~~v~V~D~~Tl~~~~ti~-----~-~~ 136 (268)
T 3nok_A 68 FESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGE----RLYQLTWTEGLLFTWSGMPPQRERTTR-----Y-SG 136 (268)
T ss_dssp EEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSS----CEEEEESSSCEEEEEETTTTEEEEEEE-----C-SS
T ss_pred EEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCC----EEEEEEccCCEEEEEECCcCcEEEEEe-----C-CC
Confidence 467788899999999999987665 444433 3666542 555667789999999999876544332 1 12
Q ss_pred CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415 80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS 111 (174)
Q Consensus 80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~ 111 (174)
.=|.++ ++++.+++| ..+++|.++|.++
T Consensus 137 -eGwGLt--~Dg~~L~vS-dGs~~l~~iDp~T 164 (268)
T 3nok_A 137 -EGWGLC--YWNGKLVRS-DGGTMLTFHEPDG 164 (268)
T ss_dssp -CCCCEE--EETTEEEEE-CSSSEEEEECTTT
T ss_pred -ceeEEe--cCCCEEEEE-CCCCEEEEEcCCC
Confidence 225555 334445554 5688999999843
No 238
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.91 E-value=0.0032 Score=54.57 Aligned_cols=25 Identities=16% Similarity=0.038 Sum_probs=21.1
Q ss_pred EEEEecCCcEEEEECCCCCeEEEee
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETN 26 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~ 26 (174)
|+.++.+|.+.++|.++|+++....
T Consensus 339 v~~~~~~G~l~~lD~~tG~~lw~~~ 363 (582)
T 1flg_A 339 TAHADRNGFFYVVDRSNGKLQNAFP 363 (582)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEECCCceEEEEECCCCCEecccc
Confidence 5678899999999999999876543
No 239
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.91 E-value=0.0019 Score=56.90 Aligned_cols=93 Identities=13% Similarity=0.156 Sum_probs=62.4
Q ss_pred CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEc
Q psy6415 9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHL 88 (174)
Q Consensus 9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fs 88 (174)
|.|..||+++++.++...+...+.+..+... +..++.++.|+.+++||.++++.+..+.+ .+.. ...-+.|.
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~---g~~v~~g~~dg~l~a~D~~tG~~lw~~~~----~~~~-~~~p~~y~ 528 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTA---GNVVFQGTADGRLVAYHAATGEKLWEAPT----GTGV-VAAPSTYM 528 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEET---TTEEEEECTTSEEEEEETTTCCEEEEEEC----SSCC-CSCCEEEE
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEeC---CCEEEEECCCCcEEEEECCCCceeeeeeC----CCCc-ccCCEEEE
Confidence 8899999999999888765544444444443 36888899999999999999876543321 2211 22345566
Q ss_pred CCCCCEEEEEcC----------------CCcEEEEec
Q psy6415 89 PQNRDLFVTCGG----------------SGSLNLWQL 109 (174)
Q Consensus 89 P~~~~~las~s~----------------Dg~V~lWd~ 109 (174)
+++..+++..+. .+.+..|.+
T Consensus 529 ~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l 565 (677)
T 1kb0_A 529 VDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVV 565 (677)
T ss_dssp ETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEE
T ss_pred eCCEEEEEEeccCCccccccccccccCCCCeEEEEec
Confidence 655556565433 467888887
No 240
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.74 E-value=0.0062 Score=52.58 Aligned_cols=25 Identities=16% Similarity=0.021 Sum_probs=20.6
Q ss_pred EEEEecCCcEEEEECCCCCeEEEee
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETN 26 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~ 26 (174)
|+.+..+|.+.+.|.++|+.+....
T Consensus 319 v~~~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 319 LSHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEeCCCcEEEEEECCCCCEEeeec
Confidence 4568889999999999999876643
No 241
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.68 E-value=0.014 Score=48.75 Aligned_cols=94 Identities=12% Similarity=0.182 Sum_probs=57.7
Q ss_pred ecCCcEEEEECCCCCeEEEe--e-----------cCCCEEEEEecCCCCCCCEEEEE-e---------CCCcEEEEECCC
Q psy6415 6 YDNGDLKMFDLKTMSLKWET--N-----------LKNGVCGVDFDRRDIPMNKLVAT-T---------LEAKLFVFDLKT 62 (174)
Q Consensus 6 s~Dg~iklWDl~~~~~~~~~--~-----------~~~~V~sv~f~~~~~~~~~l~s~-s---------~Dg~I~iWD~~~ 62 (174)
+..++|.+.|+.++...... . ...+...++|+|++ +.+..+ . .++.|.+.|+++
T Consensus 283 s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg---~rlyVa~~~~~~gthk~~s~~VsVID~~T 359 (426)
T 3c75_H 283 TYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQS---DRIYLLVDQRDEWKHKAASRFVVVLNAET 359 (426)
T ss_dssp BTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGG---TEEEEEEEECCTTCTTSCEEEEEEEETTT
T ss_pred eCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCC---CEEEEEecccccccccCCCCEEEEEECCC
Confidence 34677888888655432110 0 01222236888864 555443 2 245799999998
Q ss_pred cccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEc-CCCcEEEEec
Q psy6415 63 LHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCG-GSGSLNLWQL 109 (174)
Q Consensus 63 ~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s-~Dg~V~lWd~ 109 (174)
.+.+..+.+ + . ..+.++|+|++..++.++. .+++|.++|+
T Consensus 360 ~kvv~~I~v----g--~-~P~gia~spDg~~~lyv~n~~s~~VsVID~ 400 (426)
T 3c75_H 360 GERINKIEL----G--H-EIDSINVSQDAEPLLYALSAGTQTLHIYDA 400 (426)
T ss_dssp CCEEEEEEE----E--E-EECEEEECCSSSCEEEEEETTTTEEEEEET
T ss_pred CeEEEEEEC----C--C-CcCeEEEccCCCEEEEEEcCCCCeEEEEEC
Confidence 765433221 1 2 4689999997652444554 7999999999
No 242
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.67 E-value=0.074 Score=44.06 Aligned_cols=92 Identities=9% Similarity=0.087 Sum_probs=56.6
Q ss_pred CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeC-CC----cEEEEECCCcccccceeeeeecccCcCcEE
Q psy6415 9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTL-EA----KLFVFDLKTLHREKGFAYLSEKAHKATTVW 83 (174)
Q Consensus 9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~-Dg----~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~ 83 (174)
+.|+.+|+.++.+..........+.|+|++++ +.|..+.. ++ .+.+.+. ....... ..+.. -. ..+
T Consensus 159 ~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G---~~lyvad~~~~~~~~~v~~~~~-~g~~~~~---~~l~~-~~-~p~ 229 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEA---DSMIITNDQNNNDRPNNYILTR-ESGFKVI---TELTK-GQ-NCN 229 (430)
T ss_dssp EEEEEEETTTTEEEEEECCCSCEEEEEECTTS---SEEEEEECCSCTTSEEEEEEEG-GGTSCSE---EEEEE-CS-SCC
T ss_pred CcEEEEECCCCEEEEEecCCCCcceEEEeCCC---CEEEEEeCCCCcccceEEEEeC-CCceeee---eeecc-CC-Cce
Confidence 77888898877655444334568899999974 64544433 22 2333443 2221100 11111 12 346
Q ss_pred EEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 84 AAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 84 ~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.++++|+++.++++-..++.|..++.
T Consensus 230 giavdp~~g~lyv~d~~~~~V~~~~~ 255 (430)
T 3tc9_A 230 GAETHPINGELYFNSWNAGQVFRYDF 255 (430)
T ss_dssp CEEECTTTCCEEEEETTTTEEEEEET
T ss_pred EEEEeCCCCEEEEEECCCCEEEEEEC
Confidence 78899977788888888899999998
No 243
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.64 E-value=0.02 Score=44.89 Aligned_cols=95 Identities=15% Similarity=0.201 Sum_probs=60.9
Q ss_pred EEEEecCC--cEEEEECCCCCeEEEeecCCCEE--EEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415 2 VVAGYDNG--DLKMFDLKTMSLKWETNLKNGVC--GVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH 77 (174)
Q Consensus 2 lasgs~Dg--~iklWDl~~~~~~~~~~~~~~V~--sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h 77 (174)
..|.+.+| .|+..|+++++............ .+++..+ ...++.-.++.+.++|.++.+.+..+. .
T Consensus 56 yestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~----~ly~ltw~~~~v~v~D~~t~~~~~ti~-----~- 125 (262)
T 3nol_A 56 YESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKD----KIVGLTWKNGLGFVWNIRNLRQVRSFN-----Y- 125 (262)
T ss_dssp EEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETT----EEEEEESSSSEEEEEETTTCCEEEEEE-----C-
T ss_pred EEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCC----EEEEEEeeCCEEEEEECccCcEEEEEE-----C-
Confidence 34566666 99999999999887665444443 3555431 344556679999999999876544332 1
Q ss_pred CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecc
Q psy6415 78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLV 110 (174)
Q Consensus 78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~ 110 (174)
.. .=|.++ ++++.+++|- .+++|.++|.+
T Consensus 126 ~~-eG~glt--~dg~~L~~Sd-Gs~~i~~iDp~ 154 (262)
T 3nol_A 126 DG-EGWGLT--HNDQYLIMSD-GTPVLRFLDPE 154 (262)
T ss_dssp SS-CCCCEE--ECSSCEEECC-SSSEEEEECTT
T ss_pred CC-CceEEe--cCCCEEEEEC-CCCeEEEEcCC
Confidence 11 224444 4455566654 47889999984
No 244
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.55 E-value=0.026 Score=43.65 Aligned_cols=92 Identities=11% Similarity=0.060 Sum_probs=58.8
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeec-CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNL-KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~-~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
|..|+.++.|..+|.+ ++..+.... ...+.++...++ ..|..++.++.|..+|.. ++... .......
T Consensus 110 l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~----g~l~vgt~~~~l~~~d~~-g~~~~-----~~~~~~~- 177 (330)
T 3hxj_A 110 LYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSED----GTIYVGSNDNYLYAINPD-GTEKW-----RFKTNDA- 177 (330)
T ss_dssp EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTT----SCEEEECTTSEEEEECTT-SCEEE-----EEECSSC-
T ss_pred EEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCC----CEEEEEcCCCEEEEECCC-CCEeE-----EEecCCC-
Confidence 4567788999999998 776655443 233555666654 457778889999999988 44221 1112223
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+.++.+.+ ++.++++ + +.|..+|.
T Consensus 178 ~~~~~~~d~-~g~l~v~-t--~~l~~~d~ 202 (330)
T 3hxj_A 178 ITSAASIGK-DGTIYFG-S--DKVYAINP 202 (330)
T ss_dssp CCSCCEECT-TCCEEEE-S--SSEEEECT
T ss_pred ceeeeEEcC-CCEEEEE-e--CEEEEECC
Confidence 455666666 4456554 3 77888884
No 245
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.51 E-value=0.058 Score=40.94 Aligned_cols=93 Identities=13% Similarity=0.050 Sum_probs=62.1
Q ss_pred CcEEEEECCCCCeE-----EEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcE
Q psy6415 9 GDLKMFDLKTMSLK-----WETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTV 82 (174)
Q Consensus 9 g~iklWDl~~~~~~-----~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i 82 (174)
+.|+.+|+.+.... .... ....+..+++++.+ +..+++-...+.|..+|+...... ........ ..
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~--~~ly~~d~~~~~I~~~~~~g~~~~-----~~~~~~~~-~p 81 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVD--KVVYWTDISEPSIGRASLHGGEPT-----TIIRQDLG-SP 81 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTT--TEEEEEETTTTEEEEEESSSCCCE-----EEECTTCC-CE
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCC--CEEEEEECCCCEEEEEecCCCCcE-----EEEECCCC-Cc
Confidence 57999998765421 1111 12346789999853 244556667889999999764321 11111113 56
Q ss_pred EEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 83 WAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 83 ~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
..+++.|.++.++++-...++|.++++
T Consensus 82 ~~ia~d~~~~~lyv~d~~~~~I~~~~~ 108 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQLDRIEVAKM 108 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cEEEEEecCCeEEEEECCCCEEEEEEc
Confidence 899999977778888888999999998
No 246
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.37 E-value=0.054 Score=41.92 Aligned_cols=95 Identities=18% Similarity=0.219 Sum_probs=61.5
Q ss_pred EEEecC--CcEEEEECCCCCeEEEeecCCCEE--EEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415 3 VAGYDN--GDLKMFDLKTMSLKWETNLKNGVC--GVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK 78 (174)
Q Consensus 3 asgs~D--g~iklWDl~~~~~~~~~~~~~~V~--sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~ 78 (174)
.|.+.+ ..|+..|+++++............ .+++.. ....+..-.++.+.++|.++.+.+..+. . .
T Consensus 35 estG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~----~~ly~ltw~~~~v~v~D~~tl~~~~ti~-----~-~ 104 (243)
T 3mbr_X 35 ESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR----DRLIQLTWRNHEGFVYDLATLTPRARFR-----Y-P 104 (243)
T ss_dssp EEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET----TEEEEEESSSSEEEEEETTTTEEEEEEE-----C-S
T ss_pred EECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC----CEEEEEEeeCCEEEEEECCcCcEEEEEe-----C-C
Confidence 445554 489999999999887665444432 344443 1445566789999999999876544332 1 1
Q ss_pred cCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415 79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS 111 (174)
Q Consensus 79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~ 111 (174)
. .=|.++ ++++.+++|- .+++|.++|.++
T Consensus 105 ~-~Gwglt--~dg~~L~vSd-gs~~l~~iDp~t 133 (243)
T 3mbr_X 105 G-EGWALT--SDDSHLYMSD-GTAVIRKLDPDT 133 (243)
T ss_dssp S-CCCEEE--ECSSCEEEEC-SSSEEEEECTTT
T ss_pred C-CceEEe--eCCCEEEEEC-CCCeEEEEeCCC
Confidence 2 225655 4455666665 588999999843
No 247
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.30 E-value=0.042 Score=43.04 Aligned_cols=101 Identities=13% Similarity=-0.021 Sum_probs=70.5
Q ss_pred EEecCCcEEEEECCCCCeEEEeecC------CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec--
Q psy6415 4 AGYDNGDLKMFDLKTMSLKWETNLK------NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK-- 75 (174)
Q Consensus 4 sgs~Dg~iklWDl~~~~~~~~~~~~------~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~-- 75 (174)
.+..+++|.+.|..+.+........ ..++.+.|. + +...+....++.|.+-|.++.+....+....+.
T Consensus 121 vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-d---g~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~ 196 (266)
T 2iwa_A 121 GSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-N---GEVWANIWQTDCIARISAKDGTLLGWILLPNLRKK 196 (266)
T ss_dssp EECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T---TEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHH
T ss_pred EECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-C---CEEEEecCCCCeEEEEECCCCcEEEEEECCCcccc
Confidence 3446789999999998876554321 247788887 3 244555567899999999998754433221110
Q ss_pred ----ccC--cCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 76 ----AHK--ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 76 ----~h~--~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+. . ..+.|+|+|++..+|+|+...++|..-++
T Consensus 197 ~~~~~~~~~~-v~nGIa~~~~~~~lfVTgk~~~~v~~i~l 235 (266)
T 2iwa_A 197 LIDEGFRDID-VLNGIAWDQENKRIFVTGKLWPKLFEIKL 235 (266)
T ss_dssp HHHTTCTTCC-CEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred cccccccccC-ceEEEEEcCCCCEEEEECCCCCeEEEEEE
Confidence 011 2 46899999988889999999999988888
No 248
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.28 E-value=0.19 Score=39.84 Aligned_cols=93 Identities=17% Similarity=0.219 Sum_probs=61.8
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec-ccCcC
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK-AHKAT 80 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~-~h~~~ 80 (174)
|..++.+|.|..+|.++++.++.... ....++.... +.|..++.++.|..+|.++++..- ... ....
T Consensus 242 v~~~~~~g~l~~~d~~tG~~~w~~~~-~~~~~~~~~~-----~~l~~~~~~g~l~~~d~~tG~~~w-----~~~~~~~~- 309 (376)
T 3q7m_A 242 VFALAYNGNLTALDLRSGQIMWKREL-GSVNDFIVDG-----NRIYLVDQNDRVMALTIDGGVTLW-----TQSDLLHR- 309 (376)
T ss_dssp EEEECTTSCEEEEETTTCCEEEEECC-CCEEEEEEET-----TEEEEEETTCCEEEEETTTCCEEE-----EECTTTTS-
T ss_pred EEEEecCcEEEEEECCCCcEEeeccC-CCCCCceEEC-----CEEEEEcCCCeEEEEECCCCcEEE-----eecccCCC-
Confidence 45677899999999999998876543 3345555542 678888899999999998875321 111 0111
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+.+.... ++ .+..++.+|.|..+|.
T Consensus 310 ~~~~~~~~--~~-~l~v~~~~g~l~~~d~ 335 (376)
T 3q7m_A 310 LLTSPVLY--NG-NLVVGDSEGYLHWINV 335 (376)
T ss_dssp CCCCCEEE--TT-EEEEECTTSEEEEEET
T ss_pred cccCCEEE--CC-EEEEEeCCCeEEEEEC
Confidence 11122222 33 5666888999999998
No 249
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.12 E-value=0.0042 Score=54.10 Aligned_cols=58 Identities=21% Similarity=0.314 Sum_probs=43.9
Q ss_pred EEEEecCCcEEEEECCCCC------------eEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCC
Q psy6415 2 VVAGYDNGDLKMFDLKTMS------------LKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKT 62 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~------------~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~ 62 (174)
++++-.+.+|.++|+.+.+ .........+-..++|+|+ ++..++.-.|++|.+||+.+
T Consensus 292 ~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~d---G~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 292 CVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGR---GNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTT---SEEEEEETTTTEEEEEEHHH
T ss_pred EEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCC---CeEEEEEecCCcEEEEEhhH
Confidence 5677778999999998652 2223334567889999997 35567788999999999976
No 250
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.09 E-value=0.36 Score=37.57 Aligned_cols=91 Identities=11% Similarity=0.034 Sum_probs=53.5
Q ss_pred EEEEecCCcEEEEECCCCCeEEEee--------------------cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECC
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETN--------------------LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK 61 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~--------------------~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~ 61 (174)
+.++..++.|..||.+++....... .......|++++.+ ..|..+...+.|..+|..
T Consensus 33 l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~---g~l~v~d~~~~i~~~d~~ 109 (322)
T 2fp8_A 33 FYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQN---NQLYIVDCYYHLSVVGSE 109 (322)
T ss_dssp EEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTT---TEEEEEETTTEEEEECTT
T ss_pred EEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCC---CcEEEEECCCCEEEEeCC
Confidence 5677788999999988765542211 01357889999732 456666555668889977
Q ss_pred Ccccccceeeeeeccc-CcCcEEEEEEcC-CCCCEEEEEc
Q psy6415 62 TLHREKGFAYLSEKAH-KATTVWAAKHLP-QNRDLFVTCG 99 (174)
Q Consensus 62 ~~~~~~~~~~~~~~~h-~~~~i~~v~fsP-~~~~~las~s 99 (174)
+.... .+ .....+. -. ..+.+++.| ++ .++++-.
T Consensus 110 ~g~~~-~~-~~~~~~~~~~-~p~~i~~d~~~G-~l~v~d~ 145 (322)
T 2fp8_A 110 GGHAT-QL-ATSVDGVPFK-WLYAVTVDQRTG-IVYFTDV 145 (322)
T ss_dssp CEECE-EE-ESEETTEECS-CEEEEEECTTTC-CEEEEES
T ss_pred CCEEE-Ee-cccCCCCccc-ccceEEEecCCC-EEEEECC
Confidence 54211 11 0011111 12 467899998 65 5666543
No 251
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.89 E-value=0.17 Score=40.17 Aligned_cols=96 Identities=13% Similarity=0.104 Sum_probs=61.2
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeec----------CCCE-EEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccccee
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNL----------KNGV-CGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFA 70 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~----------~~~V-~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~ 70 (174)
|..++.++.|..+|.++++.++.... ...+ ..+... +..+..++.++.|..+|.++++.+-.+.
T Consensus 56 v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 56 VYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVS-----GGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEE-----TTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEe-----CCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 56677889999999999998876554 2233 233333 2678889999999999999876431111
Q ss_pred eeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415 71 YLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS 111 (174)
Q Consensus 71 ~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~ 111 (174)
.... ........ ++ .+..++.+|.|..+|.++
T Consensus 131 -----~~~~-~~~~p~~~--~~-~v~v~~~~g~l~~~d~~t 162 (376)
T 3q7m_A 131 -----VAGE-ALSRPVVS--DG-LVLIHTSNGQLQALNEAD 162 (376)
T ss_dssp -----CSSC-CCSCCEEE--TT-EEEEECTTSEEEEEETTT
T ss_pred -----CCCc-eEcCCEEE--CC-EEEEEcCCCeEEEEECCC
Confidence 1111 00011111 33 556678899999999844
No 252
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.80 E-value=0.37 Score=38.50 Aligned_cols=94 Identities=12% Similarity=0.025 Sum_probs=56.5
Q ss_pred CCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEE
Q psy6415 8 NGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAK 86 (174)
Q Consensus 8 Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~ 86 (174)
.+.|..+++.++....... .......|++++.+ ++.+++-...+.|.+.|+...... . .+...-. .-+.++
T Consensus 94 ~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~--g~ly~~d~~~~~I~~~~~dG~~~~--~---l~~~~l~-~P~~ia 165 (349)
T 3v64_C 94 LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVH--DKLYWTDSGTSRIEVANLDGAHRK--V---LLWQSLE-KPRAIA 165 (349)
T ss_dssp TTEEEEEETTSCSCEEEECSSCSCCCEEEEETTT--TEEEEEETTTTEEEEEETTSCSCE--E---EECTTCS-CEEEEE
T ss_pred CCceEEEecCCCCceEEEeCCCCCccEEEEecCC--CeEEEEcCCCCeEEEEcCCCCceE--E---EEeCCCC-CcceEE
Confidence 3444555554443222111 11334678888643 355567677889999998764311 1 1112223 468999
Q ss_pred EcCCCCCEEEEEcCC-CcEEEEec
Q psy6415 87 HLPQNRDLFVTCGGS-GSLNLWQL 109 (174)
Q Consensus 87 fsP~~~~~las~s~D-g~V~lWd~ 109 (174)
+.|.++.++.|-... +.|...++
T Consensus 166 vdp~~g~ly~td~~~~~~I~r~~~ 189 (349)
T 3v64_C 166 LHPMEGTIYWTDWGNTPRIEASSM 189 (349)
T ss_dssp EETTTTEEEEEECSSSCEEEEEET
T ss_pred EecCcCeEEEeccCCCCEEEEEeC
Confidence 999878888887777 88888887
No 253
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.79 E-value=0.31 Score=37.92 Aligned_cols=92 Identities=11% Similarity=-0.035 Sum_probs=55.3
Q ss_pred CCcEEEEECCCCCeEEEee-----cCCCEEEEEecC-CCCCCCEEEEEeC-----------------CCcEEEEECCCcc
Q psy6415 8 NGDLKMFDLKTMSLKWETN-----LKNGVCGVDFDR-RDIPMNKLVATTL-----------------EAKLFVFDLKTLH 64 (174)
Q Consensus 8 Dg~iklWDl~~~~~~~~~~-----~~~~V~sv~f~~-~~~~~~~l~s~s~-----------------Dg~I~iWD~~~~~ 64 (174)
.+.|..+|.+++....... .....+.|+++| ++ +..++... ++.|..||..+.+
T Consensus 100 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G---~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 100 YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTG---IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTC---CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCC---EEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 3447777776554322111 113478899998 64 66665432 3678888876543
Q ss_pred cccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 65 REKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 65 ~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
... + . ..-. .-+.++|+|++..++++-+..+.|..|++
T Consensus 177 ~~~-~-~----~~~~-~p~gia~~~dg~~lyv~d~~~~~I~~~~~ 214 (322)
T 2fp8_A 177 TTL-L-L----KELH-VPGGAEVSADSSFVLVAEFLSHQIVKYWL 214 (322)
T ss_dssp EEE-E-E----EEES-CCCEEEECTTSSEEEEEEGGGTEEEEEES
T ss_pred EEE-e-c----cCCc-cCcceEECCCCCEEEEEeCCCCeEEEEEC
Confidence 210 0 0 1111 34678999965557777778899999998
No 254
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.64 E-value=0.15 Score=39.25 Aligned_cols=92 Identities=12% Similarity=0.110 Sum_probs=57.8
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeec-CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNL-KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~-~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
|..|+.++.|..+|.+ ++..+.... ...+.++.++++ ..|..++ +.|..+| ++.+.. ........
T Consensus 150 l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~----g~l~v~t--~~l~~~d-~~g~~~-----~~~~~~~~- 215 (330)
T 3hxj_A 150 IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKD----GTIYFGS--DKVYAIN-PDGTEK-----WNFYAGYW- 215 (330)
T ss_dssp EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTT----CCEEEES--SSEEEEC-TTSCEE-----EEECCSSC-
T ss_pred EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCC----CEEEEEe--CEEEEEC-CCCcEE-----EEEccCCc-
Confidence 5567788999999998 776655443 344566667654 3455555 8899999 554321 12222334
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+.++...++ +.+++ ++.++.|..+|.
T Consensus 216 ~~~~~~~~~~-g~l~v-~t~~~gl~~~~~ 242 (330)
T 3hxj_A 216 TVTRPAISED-GTIYV-TSLDGHLYAINP 242 (330)
T ss_dssp CCSCCEECTT-SCEEE-EETTTEEEEECT
T ss_pred ceeceEECCC-CeEEE-EcCCCeEEEECC
Confidence 5777778774 45555 556777777765
No 255
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.54 E-value=0.059 Score=47.23 Aligned_cols=51 Identities=8% Similarity=0.085 Sum_probs=31.7
Q ss_pred CCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 51 LEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 51 ~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+|.|.-||+++++.+ ..... .. +.+...+.. .+.+++.++.||.|+.||.
T Consensus 436 ~~g~l~A~D~~tG~~~-----W~~~~-~~-~~~~~~~~t-~gg~vf~g~~dg~l~a~d~ 486 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAA-----WKVPY-PT-HWNGGTLST-AGNLVFQGTAAGQMHAYSA 486 (668)
T ss_dssp CEEEEEEEETTTTEEE-----EEEEE-SS-SCCCCEEEE-TTTEEEEECTTSEEEEEET
T ss_pred ccceEEEEeCCCCcEE-----EEccC-CC-CCcCceeEe-CCCEEEEECCcccchhhhh
Confidence 3488999999887532 11111 12 233333344 3346677899999999999
No 256
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.49 E-value=0.47 Score=38.44 Aligned_cols=95 Identities=12% Similarity=0.049 Sum_probs=63.5
Q ss_pred cCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEE
Q psy6415 7 DNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAK 86 (174)
Q Consensus 7 ~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~ 86 (174)
....|+..|+.+...............|+|++.. +..+.+-...+.|..+++....... .+..... ....++
T Consensus 94 ~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~--~~ly~~D~~~~~I~r~~~~g~~~~~-----~~~~~~~-~p~gla 165 (386)
T 3v65_B 94 NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRR--ELVFWSDVTLDRILRANLNGSNVEE-----VVSTGLE-SPGGLA 165 (386)
T ss_dssp CBSCEEEECTTSCCCEEEECSCSCEEEEEEETTT--TEEEEEETTTTEEEEEETTSCCEEE-----EECSSCS-CCCCEE
T ss_pred cCccceeeccCCCcEEEEecCCCccEEEEEecCC--CeEEEEeCCCCcEEEEecCCCCcEE-----EEeCCCC-CccEEE
Confidence 3467888888776654444444568899999753 2444566678899999988643111 1111112 345788
Q ss_pred EcCCCCCEEEEEcCCCcEEEEec
Q psy6415 87 HLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 87 fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
+.|.++.++.+-...+.|.+.++
T Consensus 166 vd~~~g~lY~~d~~~~~I~~~~~ 188 (386)
T 3v65_B 166 VDWVHDKLYWTDSGTSRIEVANL 188 (386)
T ss_dssp EETTTTEEEEEETTTTEEEECBT
T ss_pred EEeCCCeEEEEcCCCCeEEEEeC
Confidence 88877788888888889998888
No 257
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.48 E-value=0.61 Score=36.54 Aligned_cols=95 Identities=15% Similarity=0.033 Sum_probs=54.9
Q ss_pred cCCcEEEEECCC----CCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415 7 DNGDLKMFDLKT----MSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT 81 (174)
Q Consensus 7 ~Dg~iklWDl~~----~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~ 81 (174)
.++.|..+|+.+ ........ .-.....|++++.+ ++.+++-...+.|.+.|+...... . + ....-. .
T Consensus 50 ~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~--~~ly~~d~~~~~I~~~~~~g~~~~-~--~--~~~~~~-~ 121 (316)
T 1ijq_A 50 SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH--SNIYWTDSVLGTVSVADTKGVKRK-T--L--FRENGS-K 121 (316)
T ss_dssp TTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT--TEEEEEETTTTEEEEEETTSSSEE-E--E--EECTTC-C
T ss_pred CCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC--CeEEEEECCCCEEEEEeCCCCceE-E--E--EECCCC-C
Confidence 346666666654 11111111 11345678887643 345566678889999998764311 1 1 111223 5
Q ss_pred EEEEEEcCCCCCEEEEEcCC-CcEEEEec
Q psy6415 82 VWAAKHLPQNRDLFVTCGGS-GSLNLWQL 109 (174)
Q Consensus 82 i~~v~fsP~~~~~las~s~D-g~V~lWd~ 109 (174)
-+.+++.|.++.++.+.... +.|...++
T Consensus 122 P~~iavdp~~g~ly~~d~~~~~~I~~~~~ 150 (316)
T 1ijq_A 122 PRAIVVDPVHGFMYWTDWGTPAKIKKGGL 150 (316)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred cceEEeCCCCCEEEEEccCCCCeEEEEcC
Confidence 68999999777787776554 78888777
No 258
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.43 E-value=0.29 Score=39.70 Aligned_cols=94 Identities=12% Similarity=0.025 Sum_probs=55.6
Q ss_pred CCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEE
Q psy6415 8 NGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAK 86 (174)
Q Consensus 8 Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~ 86 (174)
.+.|..+++.++....... .......|++++.+ ++.+++-...+.|.+.|+...... . .+...-. .-+.++
T Consensus 137 ~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~--g~lY~~d~~~~~I~~~~~dg~~~~--~---l~~~~l~-~P~gia 208 (386)
T 3v65_B 137 LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVH--DKLYWTDSGTSRIEVANLDGAHRK--V---LLWQSLE-KPRAIA 208 (386)
T ss_dssp TTEEEEEETTSCCEEEEECSSCSCCCCEEEETTT--TEEEEEETTTTEEEECBTTSCSCE--E---EECSSCS-CEEEEE
T ss_pred CCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCC--CeEEEEcCCCCeEEEEeCCCCceE--E---eecCCCC-CCcEEE
Confidence 4455555555443322211 11234567777643 345566677788998888753211 0 1112223 468999
Q ss_pred EcCCCCCEEEEEcCC-CcEEEEec
Q psy6415 87 HLPQNRDLFVTCGGS-GSLNLWQL 109 (174)
Q Consensus 87 fsP~~~~~las~s~D-g~V~lWd~ 109 (174)
+.|.++.++.+-... +.|...++
T Consensus 209 vdp~~g~ly~td~~~~~~I~r~~~ 232 (386)
T 3v65_B 209 LHPMEGTIYWTDWGNTPRIEASSM 232 (386)
T ss_dssp EETTTTEEEEEECSSSCEEEEEET
T ss_pred EEcCCCeEEEeccCCCCEEEEEeC
Confidence 999878788887766 78888887
No 259
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.34 E-value=0.68 Score=36.96 Aligned_cols=94 Identities=12% Similarity=0.041 Sum_probs=62.5
Q ss_pred CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEE
Q psy6415 8 NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKH 87 (174)
Q Consensus 8 Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~f 87 (174)
...|+..++.+...............|+|++.. +..+.+-...+.|..+++....... .....-. ....+++
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~--~~ly~~D~~~~~I~r~~~~g~~~~~-----~~~~~~~-~p~glav 123 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRR--ELVFWSDVTLDRILRANLNGSNVEE-----VVSTGLE-SPGGLAV 123 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSCSCEEEEEEETTT--TEEEEEETTTTEEEEEETTSCSCEE-----EECSSCS-CCCEEEE
T ss_pred ccceEEEeCCCCeeEEeecCCCceEEEEEeccc--cEEEEEeccCCceEEEecCCCCceE-----EEeCCCC-CccEEEE
Confidence 456777788766554444334568899999753 2344565678899999988643211 1111112 3467888
Q ss_pred cCCCCCEEEEEcCCCcEEEEec
Q psy6415 88 LPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 88 sP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+.++.++.+-...+.|.+.++
T Consensus 124 d~~~g~ly~~d~~~~~I~~~~~ 145 (349)
T 3v64_C 124 DWVHDKLYWTDSGTSRIEVANL 145 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEET
T ss_pred ecCCCeEEEEcCCCCeEEEEcC
Confidence 8877788888888899999998
No 260
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.33 E-value=0.71 Score=36.17 Aligned_cols=98 Identities=7% Similarity=-0.033 Sum_probs=62.3
Q ss_pred CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEE
Q psy6415 8 NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKH 87 (174)
Q Consensus 8 Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~f 87 (174)
...|+..|+.+..............+++|++.. +..+.+-...+.|..+|+.+....... ...+...-. ....+++
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~--~~ly~~D~~~~~I~~~~~~g~~~~~~~-~~~~~~~~~-~p~glav 84 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVAS--NRIYWSDLSQRMICSTQLDRAHGVSSY-DTVISRDIQ-APDGLAV 84 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCSSEEEEEEETTT--TEEEEEETTTTEEEEEEC--------C-EEEECSSCS-CCCEEEE
T ss_pred CCeEEEEECCCcceEehhcCCCceEEEEEEeCC--CEEEEEECCCCcEEEEECCCCCCCccc-EEEEeCCCC-CcCEEEE
Confidence 367999999887665444444568899999853 234556667899999998762100000 001111112 3468888
Q ss_pred cCCCCCEEEEEcCCCcEEEEec
Q psy6415 88 LPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 88 sP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+.++.++++-...++|.+.++
T Consensus 85 d~~~~~ly~~d~~~~~I~~~~~ 106 (316)
T 1ijq_A 85 DWIHSNIYWTDSVLGTVSVADT 106 (316)
T ss_dssp ETTTTEEEEEETTTTEEEEEET
T ss_pred eecCCeEEEEECCCCEEEEEeC
Confidence 8767778888888999999998
No 261
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.25 E-value=0.099 Score=45.47 Aligned_cols=25 Identities=16% Similarity=0.062 Sum_probs=20.8
Q ss_pred EEEEecCCcEEEEECCCCCeEEEee
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETN 26 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~ 26 (174)
|+.++.+|.+.+.|.++|+++....
T Consensus 326 v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 326 LTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEECCCcEEEEEECCCCCEeeccc
Confidence 5668899999999999999876543
No 262
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.82 E-value=0.1 Score=46.24 Aligned_cols=68 Identities=9% Similarity=0.004 Sum_probs=41.0
Q ss_pred CEEEEEec-CCCCCCCEEEEE-eCC----CcEEEEECCCc-ccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCC-
Q psy6415 30 GVCGVDFD-RRDIPMNKLVAT-TLE----AKLFVFDLKTL-HREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGS- 101 (174)
Q Consensus 30 ~V~sv~f~-~~~~~~~~l~s~-s~D----g~I~iWD~~~~-~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~D- 101 (174)
.+.+.+|| |++ +.||.+ +.+ .+|+++|+.++ +.+.. .+. . ...+++|+|++..++.+ +.|
T Consensus 175 ~~~~~~~S~PDG---~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~----~~~---~-~~~~~~WspDg~~l~y~-~~d~ 242 (751)
T 2xe4_A 175 DVMEVKPAPPEH---DLVAFSVDMSGNEVYTIEFKRISDPSQTIAD----KVS---G-TNGEIVWGPDHTSLFYV-TKDE 242 (751)
T ss_dssp EEEEEEECTTTT---CEEEEEEESSSSSCEEEEEEETTCTTCCCCC----CEE---E-ECSCCEECSSTTEEEEE-EECT
T ss_pred EEeeeEecCCCC---CEEEEEEeCCCCceEEEEEEECCCCCEeCCc----ccc---C-ceeeEEEecCCCEEEEE-EECC
Confidence 46788999 974 777754 333 35999999986 52211 111 1 22367899966555444 444
Q ss_pred ----CcEEEEec
Q psy6415 102 ----GSLNLWQL 109 (174)
Q Consensus 102 ----g~V~lWd~ 109 (174)
..|.++++
T Consensus 243 ~~~~~~v~~~~l 254 (751)
T 2xe4_A 243 TLRENKVWRHVM 254 (751)
T ss_dssp TCCEEEEEEEET
T ss_pred CCCCCEEEEEEC
Confidence 25666776
No 263
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.81 E-value=0.04 Score=47.45 Aligned_cols=57 Identities=25% Similarity=0.257 Sum_probs=41.4
Q ss_pred cCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc
Q psy6415 7 DNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE 66 (174)
Q Consensus 7 ~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~ 66 (174)
.+|.|..||+++++.++.......+.+..+... +..+..++.|+.|+.||.++++.+
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~---gg~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTK---GGLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEET---TTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCCeEEEEECCCCCEEEEecCCCCccceeEEEC---CCEEEEEcCCCeEEEEECCCCCEE
Confidence 468999999999999887654433332222211 267888999999999999998754
No 264
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.66 E-value=0.045 Score=47.95 Aligned_cols=57 Identities=12% Similarity=0.140 Sum_probs=41.7
Q ss_pred cCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc
Q psy6415 7 DNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE 66 (174)
Q Consensus 7 ~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~ 66 (174)
.+|.|..||+++++.++.......+....+... ++.+++++.|+.|+.||.++++.+
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~---gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTA---GNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEESSSCCCCEEEET---TTEEEEECTTSEEEEEETTTCCEE
T ss_pred ccceEEEEeCCCCcEEEEccCCCCCcCceeEeC---CCEEEEECCcccchhhhhhcChhh
Confidence 458899999999999887654433322222222 378889999999999999987654
No 265
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=94.34 E-value=1.9 Score=36.60 Aligned_cols=98 Identities=16% Similarity=0.190 Sum_probs=59.5
Q ss_pred CCcEEEEECCCCCeEEEeecC----CCEEEEEe-------cCCCCCCCEEEEEeCCC-------cEEEEECCC-cccccc
Q psy6415 8 NGDLKMFDLKTMSLKWETNLK----NGVCGVDF-------DRRDIPMNKLVATTLEA-------KLFVFDLKT-LHREKG 68 (174)
Q Consensus 8 Dg~iklWDl~~~~~~~~~~~~----~~V~sv~f-------~~~~~~~~~l~s~s~Dg-------~I~iWD~~~-~~~~~~ 68 (174)
.+.|++.|++++.+....... ...+.|+| ++++ +.|..+...+ .|.+.+.+. +.....
T Consensus 161 ~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G---~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~ 237 (496)
T 3kya_A 161 HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEA---EYMIVAIDYDGKGDESPSVYIIKRNADGTFDDR 237 (496)
T ss_dssp EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTT---CEEEEEECCCTTGGGEEEEEEEECCTTSCCSTT
T ss_pred CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCC---CEEEEEeCCCCCcccCceEEEEecCCCCceeec
Confidence 367888898887765443221 24789999 9864 6565554443 266776333 111100
Q ss_pred eeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecc
Q psy6415 69 FAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLV 110 (174)
Q Consensus 69 ~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~ 110 (174)
.....+.... ..+.++++|.++.++++-..++.|..+|++
T Consensus 238 ~~~~~v~~~~--~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 238 SDIQLIAAYK--QCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp SCEEEEEEES--CCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred ccceeeccCC--CceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 0001111111 235778999888899999999999999993
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.13 E-value=0.067 Score=46.22 Aligned_cols=55 Identities=18% Similarity=0.185 Sum_probs=40.3
Q ss_pred cCCcEEEEECCCCCeEEEeecCCCEEE--EEecCCCCCCCEEEEEeCCCcEEEEECCCcccc
Q psy6415 7 DNGDLKMFDLKTMSLKWETNLKNGVCG--VDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE 66 (174)
Q Consensus 7 ~Dg~iklWDl~~~~~~~~~~~~~~V~s--v~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~ 66 (174)
.+|.|..||+++++.++.......+.+ +... +..++.++.|+.++.||.++++.+
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~ta-----gglvf~g~~dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATA-----GNLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESSCCCSCCEEET-----TTEEEEECTTSEEEEEETTTCCEE
T ss_pred CcceEEEEECCCCCEEEEecCCCCCcccceEeC-----CCEEEEECCCCcEEEEECCCCCEE
Confidence 368999999999999877654322221 1111 367888999999999999998754
No 267
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=94.04 E-value=0.78 Score=37.91 Aligned_cols=92 Identities=13% Similarity=0.172 Sum_probs=53.7
Q ss_pred CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCC---Cc-EEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415 9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLE---AK-LFVFDLKTLHREKGFAYLSEKAHKATTVWA 84 (174)
Q Consensus 9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D---g~-I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~ 84 (174)
+.|+.+|+.++............+.|+|++++ +.+++-... .. +...+... ..... ..+ +.-. .-+.
T Consensus 162 ~~I~~id~~~g~v~~~~~~~~~P~giavd~dG---~lyVad~~~~~~~~gv~~~~~~~-~~~~~---~~~-~~~~-~P~g 232 (433)
T 4hw6_A 162 DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNG---DMVVVDDQSSDTNTGIYLFTRAS-GFTER---LSL-CNAR-GAKT 232 (433)
T ss_dssp SCEEEEETTTTEEEEECCCCSCEEEEEECTTC---CEEEEECCSCTTSEEEEEECGGG-TTCCE---EEE-EECS-SBCC
T ss_pred CCEEEEECCCCEEEEeecCCCCccEEEECCCC---CEEEEcCCCCcccceEEEEECCC-Ceecc---ccc-cccC-CCCE
Confidence 67888888777665443334558899999974 644444321 11 22233221 11000 011 1112 3457
Q ss_pred EEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 85 AKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 85 v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
++++|.++.++++-..++.|+.+|.
T Consensus 233 iavd~~~G~lyv~d~~~~~V~~~d~ 257 (433)
T 4hw6_A 233 CAVHPQNGKIYYTRYHHAMISSYDP 257 (433)
T ss_dssp CEECTTTCCEEECBTTCSEEEEECT
T ss_pred EEEeCCCCeEEEEECCCCEEEEEEC
Confidence 8899966778888788888988888
No 268
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=93.92 E-value=2.5 Score=35.50 Aligned_cols=98 Identities=12% Similarity=0.188 Sum_probs=60.6
Q ss_pred cCCcEEEEECCCCCeEEEeecC-----CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcc-ccc-----------ce
Q psy6415 7 DNGDLKMFDLKTMSLKWETNLK-----NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLH-REK-----------GF 69 (174)
Q Consensus 7 ~Dg~iklWDl~~~~~~~~~~~~-----~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~-~~~-----------~~ 69 (174)
.++.||.-++.....-...... ..|..+..||++ +.||.. .+.+|.|-.+.... ... .|
T Consensus 39 ~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG---~lLAl~-g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty 114 (452)
T 3pbp_A 39 QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSG---DLLCLF-NDNEIFVMEVPWGYSNVEDVSIQDAFQIFHY 114 (452)
T ss_dssp ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTS---SEEEEE-CSSEEEEEECCTTCSCCCCHHHHHTTEEEEE
T ss_pred ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCC---CEEEEe-cCCeEEEEEecCccccCcccccccccceeEE
Confidence 4577887787633211111111 257778999974 666665 45689999987321 111 11
Q ss_pred eeeeec-ccCcCcEEEEEEcCCCC--CEEEEEcCCCcEEEEec
Q psy6415 70 AYLSEK-AHKATTVWAAKHLPQNR--DLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 70 ~~~~~~-~h~~~~i~~v~fsP~~~--~~las~s~Dg~V~lWd~ 109 (174)
.+.... .... +|..|.|||.+. ..|++=..|++|++||+
T Consensus 115 ~l~~~~~~~~s-~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl 156 (452)
T 3pbp_A 115 SIDEEEVGPKS-SIKKVLFHPKSYRDSCIVVLKEDDTITMFDI 156 (452)
T ss_dssp EGGGCC--CCC-CEEEEEECTTBGGGCEEEEEETTSCEEEEET
T ss_pred EcCCcccCCCC-ceeEEEeccccCCCCeEEEEecCCEEEEEEc
Confidence 111110 1245 799999999743 37788899999999999
No 269
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=93.36 E-value=2.6 Score=34.09 Aligned_cols=90 Identities=14% Similarity=0.138 Sum_probs=47.1
Q ss_pred cCCcEEEEECCC--CCeEE-Ee-e--c---CCCEEEEEecCCCCCCC--EEEEEeC--CCcEEEEECCCcccccceeeee
Q psy6415 7 DNGDLKMFDLKT--MSLKW-ET-N--L---KNGVCGVDFDRRDIPMN--KLVATTL--EAKLFVFDLKTLHREKGFAYLS 73 (174)
Q Consensus 7 ~Dg~iklWDl~~--~~~~~-~~-~--~---~~~V~sv~f~~~~~~~~--~l~s~s~--Dg~I~iWD~~~~~~~~~~~~~~ 73 (174)
.+|.|.++|+++ .+... .. . . .-....+++.++. ++. .+++-.. +.+|.||++........ .+.+
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~-dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~-~~~~ 158 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDD-DNTVYLLVVNHPGSSSTVEVFKFQEEEKSLL-HLKT 158 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECT-TCCEEEEEEECSTTCCEEEEEEEETTTTEEE-EEEE
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECC-CCcEEEEEEECCCCCCeEEEEEEECCCCEEE-EEec
Confidence 689999999974 33221 11 1 0 1235666665431 122 3344333 67899998876432111 1223
Q ss_pred ecccCcCcEEEEEEcCCCCCEEEEEc
Q psy6415 74 EKAHKATTVWAAKHLPQNRDLFVTCG 99 (174)
Q Consensus 74 ~~~h~~~~i~~v~fsP~~~~~las~s 99 (174)
+.+..-...+.+.+.|+ +.++++..
T Consensus 159 ~~g~~~~~pND~~v~~~-G~fyvt~~ 183 (355)
T 3sre_A 159 IRHKLLPSVNDIVAVGP-EHFYATND 183 (355)
T ss_dssp ECCTTCSSEEEEEEEET-TEEEEEES
T ss_pred cccCCCCCCceEEEeCC-CCEEecCC
Confidence 33322225788989884 55666654
No 270
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=93.29 E-value=0.99 Score=36.06 Aligned_cols=73 Identities=5% Similarity=0.033 Sum_probs=44.5
Q ss_pred CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccccee-eeeecccCcCcEEEEEEcCC---CCCEEEEEcCC---
Q psy6415 29 NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFA-YLSEKAHKATTVWAAKHLPQ---NRDLFVTCGGS--- 101 (174)
Q Consensus 29 ~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~-~~~~~~h~~~~i~~v~fsP~---~~~~las~s~D--- 101 (174)
..-..|+|.|++ . |..+..++.|++++ . .+. ..+. +........ ....|+|+|+ ++.++++-..+
T Consensus 31 ~~P~~ia~~pdG---~-l~V~e~~g~I~~i~-~-g~~-~~~~~~~v~~~g~~-~p~gia~~pdf~~~g~lYv~~~~~~~~ 102 (352)
T 2ism_A 31 EVPWALAFLPDG---G-MLIAERPGRIRLFR-E-GRL-STYAELSVYHRGES-GLLGLALHPRFPQEPYVYAYRTVAEGG 102 (352)
T ss_dssp SCEEEEEECTTS---C-EEEEETTTEEEEEE-T-TEE-EEEEECCCCCSTTC-SEEEEEECTTTTTSCEEEEEEEECTTS
T ss_pred CCceEEEEcCCC---e-EEEEeCCCeEEEEE-C-CCc-cEeecceEeecCCC-CceeEEECCCCCCCCEEEEEEecCCCC
Confidence 456789999974 5 55556779999998 3 221 1110 001111223 5789999996 56677766543
Q ss_pred --CcEEEEec
Q psy6415 102 --GSLNLWQL 109 (174)
Q Consensus 102 --g~V~lWd~ 109 (174)
+.|..|+.
T Consensus 103 ~~~~v~r~~~ 112 (352)
T 2ism_A 103 LRNQVVRLRH 112 (352)
T ss_dssp SEEEEEEEEE
T ss_pred CccEEEEEEe
Confidence 56777776
No 271
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=93.18 E-value=2.9 Score=33.96 Aligned_cols=73 Identities=16% Similarity=0.079 Sum_probs=47.8
Q ss_pred CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcC-CCcEEEE
Q psy6415 29 NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGG-SGSLNLW 107 (174)
Q Consensus 29 ~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~-Dg~V~lW 107 (174)
.....|++++.. ++..++-...+.|.+.|+...... . .+...-. ....|++.|.++.++.|-.. .+.|...
T Consensus 159 ~~p~glavD~~~--~~lY~~d~~~~~I~~~~~~g~~~~-~----l~~~~~~-~P~~iavdp~~g~ly~td~~~~~~I~~~ 230 (400)
T 3p5b_L 159 QAPDGLAVDWIH--SNIYWTDSVLGTVSVADTKGVKRK-T----LFRENGS-KPRAIVVDPVHGFMYWTDWGTPAKIKKG 230 (400)
T ss_dssp SCEEEEEEETTT--TEEEEEETTTTEEEEECTTTCSEE-E----EEECSSC-CEEEEEEETTTTEEEEEECSSSCCEEEE
T ss_pred CCcccEEEEecC--CceEEEECCCCeEEEEeCCCCceE-E----EEeCCCC-CcceEEEecccCeEEEEeCCCCCEEEEE
Confidence 346788888742 355566677889999998764321 0 1111222 46899999977777777644 4788888
Q ss_pred ec
Q psy6415 108 QL 109 (174)
Q Consensus 108 d~ 109 (174)
++
T Consensus 231 ~~ 232 (400)
T 3p5b_L 231 GL 232 (400)
T ss_dssp ET
T ss_pred eC
Confidence 87
No 272
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=93.17 E-value=2.1 Score=34.53 Aligned_cols=99 Identities=10% Similarity=0.079 Sum_probs=58.3
Q ss_pred EEEecCCcEEEEECCCCCeEEE-eec-----C--CCEEEEEe---cCCCCCCCEEEEEe-------------CCCcEEEE
Q psy6415 3 VAGYDNGDLKMFDLKTMSLKWE-TNL-----K--NGVCGVDF---DRRDIPMNKLVATT-------------LEAKLFVF 58 (174)
Q Consensus 3 asgs~Dg~iklWDl~~~~~~~~-~~~-----~--~~V~sv~f---~~~~~~~~~l~s~s-------------~Dg~I~iW 58 (174)
++--..|+|..||..++..... ... . ..+..|.+ +|+ +..+++.. .++.|..+
T Consensus 29 vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~---grL~vv~~~~~af~~~g~~~~g~~~v~~~ 105 (334)
T 2p9w_A 29 QSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS---KRLFAVMKNAKSFNFADQSSHGASSFHSF 105 (334)
T ss_dssp EEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC---CEEEEEEEETTTTCTTSCCSSSCCEEEEE
T ss_pred EEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC---CcEEEEEcccccccccccccCCCCEEEEE
Confidence 3444689999999986654332 111 0 12578999 674 24444332 26889999
Q ss_pred ECC---Ccccccceeeeeeccc----------C-cCcEEEEEEcCCCCCEEEEEcCC-CcEEEEec
Q psy6415 59 DLK---TLHREKGFAYLSEKAH----------K-ATTVWAAKHLPQNRDLFVTCGGS-GSLNLWQL 109 (174)
Q Consensus 59 D~~---~~~~~~~~~~~~~~~h----------~-~~~i~~v~fsP~~~~~las~s~D-g~V~lWd~ 109 (174)
|+. +.+.+... .+... . . ..+.++.-| +++..++++.- +.|...+-
T Consensus 106 Dl~~~~tg~~~~~~---dL~~~~~~~~~~~g~~~~-~~nDvavD~-~GnaYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 106 NLPLSENSKPVWSV---NFEKVQDEFEKKAGKRPF-GVVQSAQDR-DGNSYVAFALGMPAIARVSA 166 (334)
T ss_dssp ESSCCTTCCCSEEE---ESHHHHHHHHHHHSSCCE-EEEEEEECT-TSCEEEEEEESSCEEEEECT
T ss_pred cCCcCCCCCEEEEe---cCcccccccccccccccc-CCceeEECC-CCCEEEeCCCCCCeEEEEeC
Confidence 998 55432111 11111 1 2 478999999 56788888876 65444433
No 273
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=93.14 E-value=0.38 Score=42.57 Aligned_cols=95 Identities=9% Similarity=0.085 Sum_probs=54.6
Q ss_pred cEEEEECCCC-CeEEEeecCCCEEEEEecCCCCCCCEEEEEeCC-----CcEEEEECCCcccccceeeeeecccCcCcEE
Q psy6415 10 DLKMFDLKTM-SLKWETNLKNGVCGVDFDRRDIPMNKLVATTLE-----AKLFVFDLKTLHREKGFAYLSEKAHKATTVW 83 (174)
Q Consensus 10 ~iklWDl~~~-~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D-----g~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~ 83 (174)
+|+++|+.++ +.+.. .......+++|+|++ +.|+..+.| ..|.++++.+...... .+... .+.. ...
T Consensus 202 ~l~v~dl~~g~~~l~~-~~~~~~~~~~WspDg---~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~-lv~~~-~~~~-~~~ 274 (751)
T 2xe4_A 202 TIEFKRISDPSQTIAD-KVSGTNGEIVWGPDH---TSLFYVTKDETLRENKVWRHVMGKLQSEDV-CLYEE-HNPL-FSA 274 (751)
T ss_dssp EEEEEETTCTTCCCCC-CEEEECSCCEECSST---TEEEEEEECTTCCEEEEEEEETTSCGGGCE-EEEEC-CCTT-CEE
T ss_pred EEEEEECCCCCEeCCc-cccCceeeEEEecCC---CEEEEEEECCCCCCCEEEEEECCCCchhcE-EEEec-CCCc-eEE
Confidence 5999999988 63211 001113467899974 677766655 3688888876532211 11111 2223 456
Q ss_pred EEEEcCCCCCEEEEEcC--CCcEEEEeccc
Q psy6415 84 AAKHLPQNRDLFVTCGG--SGSLNLWQLVS 111 (174)
Q Consensus 84 ~v~fsP~~~~~las~s~--Dg~V~lWd~~~ 111 (174)
++.|||++..++.+... ...|.++|+++
T Consensus 275 ~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 275 FMYKAADTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp EEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred EEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 88999966545444432 34677778743
No 274
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=92.88 E-value=2.8 Score=32.98 Aligned_cols=72 Identities=11% Similarity=-0.064 Sum_probs=45.7
Q ss_pred CEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEc-CCCcEEEEe
Q psy6415 30 GVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCG-GSGSLNLWQ 108 (174)
Q Consensus 30 ~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s-~Dg~V~lWd 108 (174)
....+++++.+ ++.+++-...+.|.++|+...... . + ....-. .-+.+++.|.++.++.+-. ..+.|...+
T Consensus 80 ~p~glavd~~~--g~ly~~d~~~~~I~~~~~dG~~~~-~--l--~~~~~~-~P~giavdp~~g~ly~td~~~~~~I~r~~ 151 (318)
T 3sov_A 80 SPDGLACDWLG--EKLYWTDSETNRIEVSNLDGSLRK-V--L--FWQELD-QPRAIALDPSSGFMYWTDWGEVPKIERAG 151 (318)
T ss_dssp CCCEEEEETTT--TEEEEEETTTTEEEEEETTSCSCE-E--E--ECSSCS-SEEEEEEEGGGTEEEEEECSSSCEEEEEE
T ss_pred CccEEEEEcCC--CeEEEEECCCCEEEEEECCCCcEE-E--E--EeCCCC-CccEEEEeCCCCEEEEEecCCCCEEEEEE
Confidence 34567887643 355566677889999998764211 0 1 112222 4689999997777777663 357788777
Q ss_pred c
Q psy6415 109 L 109 (174)
Q Consensus 109 ~ 109 (174)
+
T Consensus 152 ~ 152 (318)
T 3sov_A 152 M 152 (318)
T ss_dssp T
T ss_pred c
Confidence 7
No 275
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=92.77 E-value=3.2 Score=37.24 Aligned_cols=72 Identities=17% Similarity=0.091 Sum_probs=47.8
Q ss_pred CEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCC-CcEEEEe
Q psy6415 30 GVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGS-GSLNLWQ 108 (174)
Q Consensus 30 ~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~D-g~V~lWd 108 (174)
....|++++.+ ++++++-+..+.|.+.|+...... . + +...-. ....|++.|..+.++.|-..+ +.|...+
T Consensus 472 ~P~GLAvD~~~--~~LY~tD~~~~~I~v~~ldG~~~~-~--l--~~~~l~-~P~gIaVDp~~g~LYwtD~g~~~~I~~~~ 543 (791)
T 3m0c_C 472 APDGLAVDWIH--SNIYWTDSVLGTVSVADTKGVKRK-T--L--FRENGS-KPRAIVVDPVHGFMYWTDWGTPAKIKKGG 543 (791)
T ss_dssp CCCEEEEETTT--TEEEEEETTTTEEEEEETTSSSEE-E--E--EECTTC-CEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred CcceeeeeecC--CcEEEEecCCCeEEEEeCCCCeEE-E--E--EeCCCC-CcceEEEecCCCCEEEecCCCCCeEEEEe
Confidence 45678888753 355667778889999999864311 1 1 111223 568999999777788776444 7888888
Q ss_pred c
Q psy6415 109 L 109 (174)
Q Consensus 109 ~ 109 (174)
+
T Consensus 544 ~ 544 (791)
T 3m0c_C 544 L 544 (791)
T ss_dssp T
T ss_pred c
Confidence 7
No 276
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=92.60 E-value=0.96 Score=36.52 Aligned_cols=97 Identities=20% Similarity=0.299 Sum_probs=61.9
Q ss_pred CCcEEEEECC---CCCeEEEeecC--------------CCEEEEEecCCCCCCCEEEEEeCC-CcEEEEECCCcccccce
Q psy6415 8 NGDLKMFDLK---TMSLKWETNLK--------------NGVCGVDFDRRDIPMNKLVATTLE-AKLFVFDLKTLHREKGF 69 (174)
Q Consensus 8 Dg~iklWDl~---~~~~~~~~~~~--------------~~V~sv~f~~~~~~~~~l~s~s~D-g~I~iWD~~~~~~~~~~ 69 (174)
+..|..+|+. +++..+..... ...+.++.++++ +..++++.- +.|...|...... ..+
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~G---naYVt~s~~~~~I~rV~pdG~~~-~~~ 174 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDG---NSYVAFALGMPAIARVSADGKTV-STF 174 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTS---CEEEEEEESSCEEEEECTTSCCE-EEE
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCC---CEEEeCCCCCCeEEEEeCCCCEE-eee
Confidence 6779999999 78776554321 248899999974 889988877 7777766654321 111
Q ss_pred eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 70 AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 70 ~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.............+.++++|++ .+|+.....|.+.-+|+
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg-~~Liv~~~~g~L~~fD~ 213 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHS-NKLIAFGGPRALTAFDV 213 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTT-TEEEEESSSSSEEEEEC
T ss_pred eecCCCcccccCcceEEEeCCC-CEEEEEcCCCeEEEEcC
Confidence 0000001111136789999965 45555555999999998
No 277
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=92.52 E-value=1 Score=36.17 Aligned_cols=73 Identities=10% Similarity=0.004 Sum_probs=44.4
Q ss_pred CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceee-eeecccCcCcEEEEEEcCC---CCCEEEEEcC---C
Q psy6415 29 NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAY-LSEKAHKATTVWAAKHLPQ---NRDLFVTCGG---S 101 (174)
Q Consensus 29 ~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~-~~~~~h~~~~i~~v~fsP~---~~~~las~s~---D 101 (174)
..-..|+|.|++ .|..+..++.|+++|... . ..+.. ........ ....|+|+|+ ++.++++-+. +
T Consensus 29 ~~P~~ia~~pdG----~l~V~e~~g~I~~~d~~G-~--~~~~~~~v~~~g~~-g~~gia~~pdf~~~g~lyv~~~~~~~~ 100 (354)
T 3a9g_A 29 EVPWSIAPLGGG----RYLVTERPGRLVLISPSG-K--KLVASFDVANVGEA-GLLGLALHPEFPKKSWVYLYASYFAEG 100 (354)
T ss_dssp SCEEEEEEEETT----EEEEEETTTEEEEECSSC-E--EEEEECCCCCSTTC-SEEEEEECTTTTTSCEEEEEEEEECGG
T ss_pred CCCeEEEEcCCC----eEEEEeCCCEEEEEeCCC-c--eEeeccceeecCCC-ceeeEEeCCCCCcCCEEEEEEeccCCC
Confidence 456789999963 466667779999998432 2 11110 00111223 5789999996 5667776543 3
Q ss_pred ----CcEEEEec
Q psy6415 102 ----GSLNLWQL 109 (174)
Q Consensus 102 ----g~V~lWd~ 109 (174)
..|..|+.
T Consensus 101 ~~~~~~v~r~~~ 112 (354)
T 3a9g_A 101 GHIRNRVIRGRL 112 (354)
T ss_dssp GCEEEEEEEEEE
T ss_pred CCcceEEEEEEE
Confidence 55666666
No 278
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=92.46 E-value=3.7 Score=33.32 Aligned_cols=99 Identities=7% Similarity=-0.026 Sum_probs=63.1
Q ss_pred cCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEE
Q psy6415 7 DNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAK 86 (174)
Q Consensus 7 ~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~ 86 (174)
....|+..|+.+............+..|+|++.. +..+.+-...+.|+.+++......... .......-. ....++
T Consensus 90 ~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~--~~lywsD~~~~~I~~~~~~g~~~~~~~-~~~~~~~~~-~p~gla 165 (400)
T 3p5b_L 90 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVAS--NRIYWSDLSQRMICSTQLDRAHGVSSY-DTVISRDIQ-APDGLA 165 (400)
T ss_dssp ETTEEEEECTTSCSCEEEECSCSCEEEEEEETTT--TEEEEEETTTTEEEEEEC------CCC-EEEECSSCS-CEEEEE
T ss_pred ccceeEEEccCCcceeEeccccCcceEEeeeecc--CceEEEecCCCeEEEEEcccCCCCCcc-eEEEeCCCC-CcccEE
Confidence 3477888888877655444445678899999853 234455567789999998752200000 011111222 567889
Q ss_pred EcCCCCCEEEEEcCCCcEEEEec
Q psy6415 87 HLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 87 fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
+.+.++.++.+-...+.|.+.++
T Consensus 166 vD~~~~~lY~~d~~~~~I~~~~~ 188 (400)
T 3p5b_L 166 VDWIHSNIYWTDSVLGTVSVADT 188 (400)
T ss_dssp EETTTTEEEEEETTTTEEEEECT
T ss_pred EEecCCceEEEECCCCeEEEEeC
Confidence 98877788888888999999888
No 279
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.26 E-value=0.2 Score=43.46 Aligned_cols=55 Identities=24% Similarity=0.210 Sum_probs=40.2
Q ss_pred cCCcEEEEECCCCCeEEEeecCCCEE-E-EEecCCCCCCCEEEEEeCCCcEEEEECCCcccc
Q psy6415 7 DNGDLKMFDLKTMSLKWETNLKNGVC-G-VDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE 66 (174)
Q Consensus 7 ~Dg~iklWDl~~~~~~~~~~~~~~V~-s-v~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~ 66 (174)
.+|.|..||+++++.++.......+. + ++.. +..+..++.|+.++.||.++++.+
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~ta-----gg~vf~gt~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFAVWGGTMATA-----GDLVFYGTLDGYLKARDSDTGDLL 507 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEET-----TTEEEEECTTSEEEEEETTTCCEE
T ss_pred CcCeEEEEECCCCCEEeEecCCCCccCcceEec-----CCEEEEECCCCeEEEEECCCCCEE
Confidence 45899999999999988765332221 1 2211 367888999999999999998754
No 280
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=92.13 E-value=5 Score=35.96 Aligned_cols=98 Identities=7% Similarity=-0.033 Sum_probs=60.6
Q ss_pred CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEE
Q psy6415 8 NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKH 87 (174)
Q Consensus 8 Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~f 87 (174)
...|+..++..............+..|+|++.. +.++++-...+.|+.+++......... ...+...-. ....|++
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~--~~lY~sD~~~~~I~~~~l~g~~~~~~~-~~vi~~~l~-~P~GLAv 478 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVAS--NRIYWSDLSQRMICSTQLDRAHGVSSY-DTVISRDIQ-APDGLAV 478 (791)
T ss_dssp BSSEEEECTTSCCCEEEECSCSSEEEEEEETTT--TEEEEEETTTTEEEEEEC--------C-EEEECSSCS-CCCEEEE
T ss_pred ccceeEeeccCCcceeeecCCCceEEEeecccC--CeeEEeeccceeEEEEeccCCCCCcce-eEEEecCCC-Ccceeee
Confidence 356777777665544444344567899999853 244556667788999998753210000 011111122 4567889
Q ss_pred cCCCCCEEEEEcCCCcEEEEec
Q psy6415 88 LPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 88 sP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+.++.++++-...++|.+.++
T Consensus 479 D~~~~~LY~tD~~~~~I~v~~l 500 (791)
T 3m0c_C 479 DWIHSNIYWTDSVLGTVSVADT 500 (791)
T ss_dssp ETTTTEEEEEETTTTEEEEEET
T ss_pred eecCCcEEEEecCCCeEEEEeC
Confidence 8877789999999999999998
No 281
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=92.10 E-value=1.2 Score=38.53 Aligned_cols=93 Identities=14% Similarity=0.029 Sum_probs=54.3
Q ss_pred cEEEEECCCCCeEE--Eee--cCCCEEEEEecCCCCCCCEEEEEe-CCCcEEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415 10 DLKMFDLKTMSLKW--ETN--LKNGVCGVDFDRRDIPMNKLVATT-LEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWA 84 (174)
Q Consensus 10 ~iklWDl~~~~~~~--~~~--~~~~V~sv~f~~~~~~~~~l~s~s-~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~ 84 (174)
.+.+||+.+++... ... ...-..++++.++ +..++.|+ .+..+.+||..+.+-... ..+.. .. .-.+
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~---g~lyv~GG~~~~~v~~yd~~t~~W~~~---~~~~~-~R-~~~s 291 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGN---GQIVVTGGNDAKKTSLYDSSSDSWIPG---PDMQV-AR-GYQS 291 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTT---SCEEEECSSSTTCEEEEEGGGTEEEEC---CCCSS-CC-SSCE
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCC---CCEEEeCCCCCCceEEecCcCCceeEC---CCCCc-cc-cccc
Confidence 58899998876322 111 1122334566554 37788887 456899999987542211 01111 11 1124
Q ss_pred EEEcCCCCCEEEEEc-CC-----CcEEEEeccc
Q psy6415 85 AKHLPQNRDLFVTCG-GS-----GSLNLWQLVS 111 (174)
Q Consensus 85 v~fsP~~~~~las~s-~D-----g~V~lWd~~~ 111 (174)
+...| ++.+++.|| .+ ..+.+||.++
T Consensus 292 ~~~~~-dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 292 SATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp EEECT-TSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred eEEec-CCeEEEEeCcccCCcccccceEeCCCC
Confidence 45666 567889888 45 5799999854
No 282
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=92.10 E-value=1.2 Score=35.62 Aligned_cols=67 Identities=9% Similarity=0.074 Sum_probs=39.7
Q ss_pred CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccc--ccceeeeeecccCcCcEEEEEEcCC---CCCEEEEEcC
Q psy6415 29 NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHR--EKGFAYLSEKAHKATTVWAAKHLPQ---NRDLFVTCGG 100 (174)
Q Consensus 29 ~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~--~~~~~~~~~~~h~~~~i~~v~fsP~---~~~~las~s~ 100 (174)
..-..|+|.|++ +.|..+...|.|+++|...... ..... ........ ....++|+|+ ++.++++-+.
T Consensus 18 ~~P~~i~~~pdG---~~l~V~e~~G~i~~~~~~g~~~~~~~~~~-~v~~~g~~-g~~gia~~pdf~~~g~lYv~~~~ 89 (353)
T 2g8s_A 18 DHPWALAFLPDN---HGMLITLRGGELRHWQAGKGLSAPLSGVP-DVWAHGQG-GLLDVVLAPDFAQSRRIWLSYSE 89 (353)
T ss_dssp SSEEEEEECSTT---CCEEEEETTTEEEEEETTTEECCCCBSCC-CCCCSTTC-SEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCcEEEEEcCCC---CEEEEEeCCceEEEEeCCCceeeEecCCc-ccccCCCC-CceeEEECCCCCCCCEEEEEEeC
Confidence 446789999974 5255666789999998543211 11000 00111233 5789999996 5667776443
No 283
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=92.09 E-value=1 Score=37.79 Aligned_cols=77 Identities=10% Similarity=0.085 Sum_probs=50.6
Q ss_pred CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccc-e----eeeeecccCcCcEEEEEEcCCCCCEEEE--EcC
Q psy6415 28 KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKG-F----AYLSEKAHKATTVWAAKHLPQNRDLFVT--CGG 100 (174)
Q Consensus 28 ~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~-~----~~~~~~~h~~~~i~~v~fsP~~~~~las--~s~ 100 (174)
...|..+-|||-+..+..|++-..|++||+||+........ + ....+..+.. .|.+++|.+ ++-.|-. .+.
T Consensus 124 ~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~-ev~S~~Fg~-~~lTLYvl~~t~ 201 (452)
T 3pbp_A 124 KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVN-DITDLEFSK-DGLTLYCLNTTE 201 (452)
T ss_dssp CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCC-CEEEEEECT-TSSCEEEEECTT
T ss_pred CCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccc-eEEEEEEcC-CCcEEEEEecCC
Confidence 46699999999876667899999999999999986221100 0 0001112224 788999998 4443333 457
Q ss_pred CCcEEE
Q psy6415 101 SGSLNL 106 (174)
Q Consensus 101 Dg~V~l 106 (174)
.|.|+-
T Consensus 202 ~GDIYA 207 (452)
T 3pbp_A 202 GGDIFA 207 (452)
T ss_dssp SCEEEE
T ss_pred CCCEEE
Confidence 777754
No 284
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=90.70 E-value=3 Score=33.64 Aligned_cols=76 Identities=13% Similarity=0.090 Sum_probs=44.4
Q ss_pred CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccccee-e-eeecccCcCcEEEEEEcCC---CCCEEEEE--cCC
Q psy6415 29 NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFA-Y-LSEKAHKATTVWAAKHLPQ---NRDLFVTC--GGS 101 (174)
Q Consensus 29 ~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~-~-~~~~~h~~~~i~~v~fsP~---~~~~las~--s~D 101 (174)
..-..|+|.|++ ..+++--..|.|++++..+.... .+. + ........ ....|+|+|+ ++.++++= ..+
T Consensus 32 ~~P~~ia~~pdG---~llVter~~G~I~~v~~~~g~~~-~v~~~~~v~~~g~~-GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 32 NSPWGLAPLPGG---DLLVSSRDEATITRVDAKTGRKT-ELGEVPGVSPSGEG-GLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp SSEEEEEECTTS---CEEEEETTTCEEEEECTTTCCEE-EEEECTTCCCBTTB-SEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred CCceEEEEcCCC---cEEEEEecCCEEEEEECCCCcEe-eecccCceeecCCC-CceeeEeccccccCCEEEEEEecCCC
Confidence 456899999974 55555444899999986543321 010 0 01112234 6889999995 46566642 244
Q ss_pred CcEEEEec
Q psy6415 102 GSLNLWQL 109 (174)
Q Consensus 102 g~V~lWd~ 109 (174)
+.|.-|.+
T Consensus 107 ~~v~R~~~ 114 (347)
T 3das_A 107 NRIVRMLY 114 (347)
T ss_dssp EEEEEEEB
T ss_pred CEEEEEEe
Confidence 55555555
No 285
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=90.40 E-value=1.2 Score=40.71 Aligned_cols=36 Identities=31% Similarity=0.277 Sum_probs=27.7
Q ss_pred CEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccc
Q psy6415 30 GVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKG 68 (174)
Q Consensus 30 ~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~ 68 (174)
.+.+++..++ ...++|-+.|+++|||++.+++++..
T Consensus 237 ~~~~~~~~~~---~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 237 TIISMIFLST---YNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp CEEEEEEETT---TTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEEeecCC---CcEEEEEECCCEEEEEECCCCCeEee
Confidence 4566666654 36788999999999999999876543
No 286
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=90.04 E-value=4 Score=31.32 Aligned_cols=70 Identities=7% Similarity=-0.030 Sum_probs=44.5
Q ss_pred CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCC--cEE
Q psy6415 28 KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSG--SLN 105 (174)
Q Consensus 28 ~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg--~V~ 105 (174)
......++|++++ +.+++-..++.|..||..... . . .. .-.. ....+++.|++ .++++..... .|.
T Consensus 31 ~~~pegia~~~~g---~lyv~d~~~~~I~~~d~~g~~-~---~--~~-~~~~-~p~gia~~~dG-~l~vad~~~~~~~v~ 98 (306)
T 2p4o_A 31 NTFLENLASAPDG---TIFVTNHEVGEIVSITPDGNQ-Q---I--HA-TVEG-KVSGLAFTSNG-DLVATGWNADSIPVV 98 (306)
T ss_dssp TCCEEEEEECTTS---CEEEEETTTTEEEEECTTCCE-E---E--EE-ECSS-EEEEEEECTTS-CEEEEEECTTSCEEE
T ss_pred CCCcceEEECCCC---CEEEEeCCCCeEEEECCCCce-E---E--EE-eCCC-CceeEEEcCCC-cEEEEeccCCcceEE
Confidence 3557889999863 666776788999999987631 1 1 11 1123 67889999954 5666554332 355
Q ss_pred EEec
Q psy6415 106 LWQL 109 (174)
Q Consensus 106 lWd~ 109 (174)
.+|.
T Consensus 99 ~~d~ 102 (306)
T 2p4o_A 99 SLVK 102 (306)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 5554
No 287
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=90.02 E-value=2.6 Score=35.10 Aligned_cols=63 Identities=6% Similarity=0.083 Sum_probs=38.1
Q ss_pred CCEEEEEecCCCCCCCEEEEEeCC-CcEEEEECCCcccccceeeeeec------ccCcCcEEEEEEcCC---CCCEEEEE
Q psy6415 29 NGVCGVDFDRRDIPMNKLVATTLE-AKLFVFDLKTLHREKGFAYLSEK------AHKATTVWAAKHLPQ---NRDLFVTC 98 (174)
Q Consensus 29 ~~V~sv~f~~~~~~~~~l~s~s~D-g~I~iWD~~~~~~~~~~~~~~~~------~h~~~~i~~v~fsP~---~~~~las~ 98 (174)
..-.+|+|.|++ ..+++ ... +.|++++..+.... . +..+. ..+. .+..|+|+|+ ++.++++-
T Consensus 27 ~~P~~~a~~pdG---~l~V~-e~~gg~I~~~~~~~g~~~-~--~~~~~~~~~~~~g~~-Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 27 NKPHALLWGPDN---QIWLT-ERATGKILRVNPESGSVK-T--VFQVPEIVNDADGQN-GLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp SSEEEEEECTTS---CEEEE-ETTTCEEEEECTTTCCEE-E--EEECTTCCCCTTSSC-SEEEEEECTTTTTSCEEEEEE
T ss_pred CCceEEEEcCCC---cEEEE-EcCCCEEEEEECCCCcEe-E--EecCCccccccCCCC-ceeEEEECCCcCcCCEEEEEE
Confidence 456799999974 55554 455 47888876543211 1 11111 1234 6889999996 66666665
Q ss_pred c
Q psy6415 99 G 99 (174)
Q Consensus 99 s 99 (174)
+
T Consensus 99 s 99 (454)
T 1cru_A 99 T 99 (454)
T ss_dssp E
T ss_pred e
Confidence 4
No 288
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=89.97 E-value=9.5 Score=33.46 Aligned_cols=100 Identities=17% Similarity=0.162 Sum_probs=62.7
Q ss_pred EEEEecCCcEEEEECCCCCeEEEee---------cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETN---------LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL 72 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~---------~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~ 72 (174)
|-.|..++-|..||.+++....... ....|.++..+++ ++.|-.|+.++-|.+||.++.+..+ +...
T Consensus 370 lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~---g~~lWigt~~~Gl~~~d~~~~~~~~-~~~~ 445 (795)
T 4a2l_A 370 LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEK---KSLVYIGTHAGGLSILHRNSGQVEN-FNQR 445 (795)
T ss_dssp EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETT---TTEEEEEETTTEEEEEETTTCCEEE-ECTT
T ss_pred EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCC---CCEEEEEeCcCceeEEeCCCCcEEE-eecC
Confidence 3456777788999988876543321 1356899988775 2437778888889999988754211 1000
Q ss_pred eecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 73 SEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 73 ~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
...-... .|+++...++ +.+.+.+. + -|.+||.
T Consensus 446 ~~~l~~~-~v~~i~~d~~-g~lwigt~-~-Gl~~~~~ 478 (795)
T 4a2l_A 446 NSQLVNE-NVYAILPDGE-GNLWLGTL-S-ALVRFNP 478 (795)
T ss_dssp TSCCSCS-CEEEEEECSS-SCEEEEES-S-CEEEEET
T ss_pred CCCcCCC-eeEEEEECCC-CCEEEEec-C-ceeEEeC
Confidence 0001234 7999988884 45555443 4 4888887
No 289
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=89.79 E-value=0.6 Score=41.12 Aligned_cols=96 Identities=8% Similarity=0.016 Sum_probs=55.6
Q ss_pred CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEE-EEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEE
Q psy6415 9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLV-ATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKH 87 (174)
Q Consensus 9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~-s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~f 87 (174)
+.|+..|+.+............+..|+|++.. +.|. +-...+.|+.+|+.+....... ...+...-. ....|++
T Consensus 386 ~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~---~~Ly~sD~~~~~I~~~~~~g~~~~~~~-~~~i~~~~~-~P~glav 460 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVAS---NRIYWSDLSQRMICSTQLDRAHGVSSY-DTVISRDIQ-APDGLAV 460 (699)
T ss_dssp TC-CEECTTSCCEECCSCCCTTCCCCEEETTT---TEEEECCTTTTSBEEEESCCCCC-CCC-CCBCCSCC---CCCEEC
T ss_pred cceEEEeCCCCcceeeeccCcceEEEcccccc---CeEEEEecCCCeEEEEecCCCCCCcce-EEEEeCCCC-CcceEEE
Confidence 56777777766544333223456678998753 4554 4456789999998751100000 000111111 2346788
Q ss_pred cCCCCCEEEEEcCCCcEEEEec
Q psy6415 88 LPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 88 sP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+.++.++++-...++|.+.++
T Consensus 461 D~~~g~LY~tD~~~~~I~v~d~ 482 (699)
T 1n7d_A 461 DWIHSNIYWTDSVLGTVSVADT 482 (699)
T ss_dssp CCSSSBCEECCTTTSCEEEEBS
T ss_pred EeeCCcEEEEeccCCeEEEEec
Confidence 8667778888778899999988
No 290
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=89.49 E-value=9.8 Score=32.96 Aligned_cols=94 Identities=16% Similarity=0.071 Sum_probs=54.2
Q ss_pred CCcEEEEECCCCCeEEEeec-CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEE
Q psy6415 8 NGDLKMFDLKTMSLKWETNL-KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAK 86 (174)
Q Consensus 8 Dg~iklWDl~~~~~~~~~~~-~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~ 86 (174)
++.|..+++.+......... ......|++++.+ ++..++-...+.|.+.|+...... . + ....-. .-+.|+
T Consensus 58 ~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~--~~LY~tD~~~~~I~v~~~dG~~~~--~-l--~~~~l~-~P~~ia 129 (628)
T 4a0p_A 58 LKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLG--KNLYWADTGTNRIEVSKLDGQHRQ--V-L--VWKDLD-SPRALA 129 (628)
T ss_dssp TTEEEEEETTSCSCEEEECSSCSCCCEEEEETTT--TEEEEEETTTTEEEEEETTSTTCE--E-E--ECSSCC-CEEEEE
T ss_pred CCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCC--CEEEEEECCCCEEEEEecCCCcEE--E-E--EeCCCC-CcccEE
Confidence 45555555544332222211 1345677887643 355566677889999998764311 1 1 111112 458999
Q ss_pred EcCCCCCEEEEE-cCCCcEEEEec
Q psy6415 87 HLPQNRDLFVTC-GGSGSLNLWQL 109 (174)
Q Consensus 87 fsP~~~~~las~-s~Dg~V~lWd~ 109 (174)
+.|..+.++.|- +..+.|...++
T Consensus 130 vdp~~G~lY~tD~g~~~~I~r~~~ 153 (628)
T 4a0p_A 130 LDPAEGFMYWTEWGGKPKIDRAAM 153 (628)
T ss_dssp EETTTTEEEEEECSSSCEEEEEET
T ss_pred EccCCCeEEEeCCCCCCEEEEEeC
Confidence 999777777775 33567777776
No 291
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=89.23 E-value=6.6 Score=30.62 Aligned_cols=67 Identities=12% Similarity=0.170 Sum_probs=39.3
Q ss_pred CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec--ccCcCcEEEEEEcCCCCCEEEEEcCCCcE
Q psy6415 28 KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK--AHKATTVWAAKHLPQNRDLFVTCGGSGSL 104 (174)
Q Consensus 28 ~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~--~h~~~~i~~v~fsP~~~~~las~s~Dg~V 104 (174)
...+..++++++ ..+..++.+|.+++.+...... ....... .+.. .+.+++|.| ++.++|.+ .+|.|
T Consensus 204 ~~~~~~~~~~~~----g~~~~~~~~G~~~~s~~D~G~t---W~~~~~~~~~~~~-~~~~v~~~~-~~~~~~~g-~~g~i 272 (327)
T 2xbg_A 204 SRRLHNMGFTPD----GRLWMIVNGGKIAFSDPDNSEN---WGELLSPLRRNSV-GFLDLAYRT-PNEVWLAG-GAGAL 272 (327)
T ss_dssp SSCEEEEEECTT----SCEEEEETTTEEEEEETTEEEE---ECCCBCTTSSCCS-CEEEEEESS-SSCEEEEE-STTCE
T ss_pred CCccceeEECCC----CCEEEEeCCceEEEecCCCCCe---eEeccCCcccCCc-ceEEEEecC-CCEEEEEe-CCCeE
Confidence 456888999875 3455667788888874221110 1000000 1223 589999998 45676654 47777
No 292
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=89.11 E-value=5.6 Score=32.28 Aligned_cols=103 Identities=12% Similarity=0.152 Sum_probs=57.0
Q ss_pred EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCC-CCCE--EEEE-eC---CCcEEEEECC--Ccccccceeee
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDI-PMNK--LVAT-TL---EAKLFVFDLK--TLHREKGFAYL 72 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~-~~~~--l~s~-s~---Dg~I~iWD~~--~~~~~~~~~~~ 72 (174)
+++-...+-+.++|+ +|+.+..... ..++.|+.=|.-. .+.. |+.+ .. +++|++|++. +.+ +....-.
T Consensus 43 ii~t~k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~ 119 (355)
T 3amr_A 43 LITTNKKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDP 119 (355)
T ss_dssp EEEEETTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCT
T ss_pred EEEEcCCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeecccc
Confidence 344455678999999 6666655533 4566666544100 0111 4333 33 5899999774 322 1111000
Q ss_pred --eecccC-cCcEEEEEE--cCCCCC-EEEEEcCCCcEEEEec
Q psy6415 73 --SEKAHK-ATTVWAAKH--LPQNRD-LFVTCGGSGSLNLWQL 109 (174)
Q Consensus 73 --~~~~h~-~~~i~~v~f--sP~~~~-~las~s~Dg~V~lWd~ 109 (174)
.. ... . .++.+++ +|..+. ++.....+|.+..|++
T Consensus 120 ~~pv-~t~~~-~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l 160 (355)
T 3amr_A 120 DHPI-ATAIN-EVYGFTLYHSQKTGKYYAMVTGKEGEFEQYEL 160 (355)
T ss_dssp TSCE-ECCCS-SCCCEEEEECTTTCCEEEEEECSSSEEEEEEE
T ss_pred ccCc-CCCCC-CeeEEEEEecCCCCcEEEEEECCCCeEEEEEE
Confidence 00 011 3 5677777 775553 3455677899999999
No 293
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=88.94 E-value=6.4 Score=30.11 Aligned_cols=97 Identities=10% Similarity=0.107 Sum_probs=54.3
Q ss_pred EEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCC-C-cEEEEECCCcccccceeeeeecccCcCc
Q psy6415 4 AGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLE-A-KLFVFDLKTLHREKGFAYLSEKAHKATT 81 (174)
Q Consensus 4 sgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D-g-~I~iWD~~~~~~~~~~~~~~~~~h~~~~ 81 (174)
+-..++.|..||..+. .............|++++++ +.+++.... + .|..+|..+.+... +..+ .... .
T Consensus 48 ~d~~~~~I~~~d~~g~-~~~~~~~~~~p~gia~~~dG---~l~vad~~~~~~~v~~~d~~~g~~~~---~~~~-~~~~-~ 118 (306)
T 2p4o_A 48 TNHEVGEIVSITPDGN-QQIHATVEGKVSGLAFTSNG---DLVATGWNADSIPVVSLVKSDGTVET---LLTL-PDAI-F 118 (306)
T ss_dssp EETTTTEEEEECTTCC-EEEEEECSSEEEEEEECTTS---CEEEEEECTTSCEEEEEECTTSCEEE---EEEC-TTCS-C
T ss_pred EeCCCCeEEEECCCCc-eEEEEeCCCCceeEEEcCCC---cEEEEeccCCcceEEEEcCCCCeEEE---EEeC-CCcc-c
Confidence 3345677777777653 22223334568899999874 655554433 2 46666766644211 1111 1112 3
Q ss_pred EEEEEEcCCCCCEEEEEcCCCcEEEEecc
Q psy6415 82 VWAAKHLPQNRDLFVTCGGSGSLNLWQLV 110 (174)
Q Consensus 82 i~~v~fsP~~~~~las~s~Dg~V~lWd~~ 110 (174)
...++..+ ++.++++-..+|.|..+|..
T Consensus 119 ~~g~~~~~-~~~~~v~d~~~g~i~~~d~~ 146 (306)
T 2p4o_A 119 LNGITPLS-DTQYLTADSYRGAIWLIDVV 146 (306)
T ss_dssp EEEEEESS-SSEEEEEETTTTEEEEEETT
T ss_pred cCcccccC-CCcEEEEECCCCeEEEEeCC
Confidence 34555555 45567777778888888873
No 294
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=87.97 E-value=8.6 Score=32.10 Aligned_cols=67 Identities=10% Similarity=0.105 Sum_probs=38.9
Q ss_pred CCEEEEEecCCCCCCC-EEEEEeCCCcEEEEECCCccccccee-ee-eec-----ccCcCcEEEEEEcCC---CCCEEEE
Q psy6415 29 NGVCGVDFDRRDIPMN-KLVATTLEAKLFVFDLKTLHREKGFA-YL-SEK-----AHKATTVWAAKHLPQ---NRDLFVT 97 (174)
Q Consensus 29 ~~V~sv~f~~~~~~~~-~l~s~s~Dg~I~iWD~~~~~~~~~~~-~~-~~~-----~h~~~~i~~v~fsP~---~~~~las 97 (174)
..-.+|+|.|++ . .|+.+...|.|++++.........+. +. ... ..+. .+..|+|+|+ ++.++++
T Consensus 14 ~~P~~~a~~pdG---~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~-Gllgia~~P~f~~n~~lYv~ 89 (463)
T 2wg3_C 14 RQPVGALHSGDG---SQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDER-GLLSLAFHPNYKKNGKLYVS 89 (463)
T ss_dssp SSEEEEECCSSS---SCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCC-SEEEEEECTTHHHHCEEEEE
T ss_pred CCceEEEECCCC---CeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCC-cceeeEeCCCCcCCCEEEEE
Confidence 345789999974 3 57777889999999754321000111 00 010 1134 6889999995 3455555
Q ss_pred Ec
Q psy6415 98 CG 99 (174)
Q Consensus 98 ~s 99 (174)
-+
T Consensus 90 yt 91 (463)
T 2wg3_C 90 YT 91 (463)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 295
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=87.88 E-value=1.5 Score=38.58 Aligned_cols=97 Identities=10% Similarity=-0.139 Sum_probs=58.6
Q ss_pred ecCCcEEEEECCCCCeEEEeec-CCCEEEEEecCCCCCCCEEEEEeCC-CcEEEEECCCcccccceeeeeecccCcCcEE
Q psy6415 6 YDNGDLKMFDLKTMSLKWETNL-KNGVCGVDFDRRDIPMNKLVATTLE-AKLFVFDLKTLHREKGFAYLSEKAHKATTVW 83 (174)
Q Consensus 6 s~Dg~iklWDl~~~~~~~~~~~-~~~V~sv~f~~~~~~~~~l~s~s~D-g~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~ 83 (174)
...+.|.+.|+.+......... ......|+++|.+ +.++++-... +.|...++...... .+ . ...-. .-+
T Consensus 472 ~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~--g~ly~td~~~~~~I~~~~~dG~~~~-~l-~---~~~l~-~Pn 543 (699)
T 1n7d_A 472 SVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVH--GFMYWTDWGTPAKIKKGGLNGVDIY-SL-V---TENIQ-WPN 543 (699)
T ss_dssp TTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSS--SCCEECCCSSSCCEEBCCSSSCCCC-EE-S---CSSCS-SCC
T ss_pred ccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCC--CcEEEcccCCCCeEEEEeCCCCCee-EE-E---eCCCC-Ccc
Confidence 3456777777765544332221 2345678888853 3444443333 78888887653211 00 0 01111 346
Q ss_pred EEEEcCCCCCEEEEEcCCCcEEEEecc
Q psy6415 84 AAKHLPQNRDLFVTCGGSGSLNLWQLV 110 (174)
Q Consensus 84 ~v~fsP~~~~~las~s~Dg~V~lWd~~ 110 (174)
.|+|+|.++.++++-+..++|..++++
T Consensus 544 Glavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 544 GITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp CEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred EEEEeccCCEEEEEecCCCeEEEEccC
Confidence 799999888898988889999999984
No 296
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=86.89 E-value=5.2 Score=32.80 Aligned_cols=73 Identities=7% Similarity=0.068 Sum_probs=48.9
Q ss_pred EEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecc
Q psy6415 31 VCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLV 110 (174)
Q Consensus 31 V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~ 110 (174)
...++++|++ +..+++-..++.|..+|..+.... .+..... .. .-+.++|+|++..++++-...++|..++.+
T Consensus 228 p~giavdp~~--g~lyv~d~~~~~V~~~~~~~~~~~---~~~~~~~-~~-~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 228 CNGAETHPIN--GELYFNSWNAGQVFRYDFTTQETT---PLFTIQD-SG-WEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp CCCEEECTTT--CCEEEEETTTTEEEEEETTTTEEE---EEEECSS-SS-CCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ceEEEEeCCC--CEEEEEECCCCEEEEEECCCCcEE---EEEEcCC-CC-cceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 4567888842 366667667889999998864321 1111111 12 357899999654488888889999998873
No 297
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=86.63 E-value=15 Score=31.81 Aligned_cols=26 Identities=12% Similarity=0.078 Sum_probs=19.5
Q ss_pred cceeeee-eccccceeeeeeCCCCCCC
Q psy6415 149 LTLLQEA-TLSSQPINSLDWSADKLGL 174 (174)
Q Consensus 149 ~~ll~~~-~~h~~~V~~l~~spd~~~~ 174 (174)
+++|.+. -+|-..+.--+|.|+.+||
T Consensus 352 G~~L~st~~gHGDa~hv~dldP~r~Gl 378 (591)
T 2zux_A 352 GKGMYSTGLGHGDALHTGDLDPGRPGL 378 (591)
T ss_dssp SCEEEECSCCCCSCEEEECCCTTSSSC
T ss_pred CCEeeeCCCCCCCeeEEeecCCCCCCc
Confidence 3455544 4788888888999998886
No 298
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=85.00 E-value=14 Score=29.93 Aligned_cols=105 Identities=11% Similarity=0.194 Sum_probs=63.8
Q ss_pred EEEEecCCcEEEEECC---CC----CeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee
Q psy6415 2 VVAGYDNGDLKMFDLK---TM----SLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE 74 (174)
Q Consensus 2 lasgs~Dg~iklWDl~---~~----~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~ 74 (174)
+.....+|.+..|++. .+ +++..+.....+-.++.++. ...|..+-+|..|..+|.+.........+...
T Consensus 146 afV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~---~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~ 222 (355)
T 3amr_A 146 AMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDE---YGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRA 222 (355)
T ss_dssp EEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETT---TTEEEEEETTTEEEEEECSTTSCSCCEEEEEB
T ss_pred EEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCC---CCeEEEecccceEEEEeCCcCCCCCceEEEEe
Confidence 3445567888888882 33 33444555677888888875 37899999997776666553211111111111
Q ss_pred c-cc-CcCcEEEEEEc--CCCC-CEEEEEcCCCcEEEEecc
Q psy6415 75 K-AH-KATTVWAAKHL--PQNR-DLFVTCGGSGSLNLWQLV 110 (174)
Q Consensus 75 ~-~h-~~~~i~~v~fs--P~~~-~~las~s~Dg~V~lWd~~ 110 (174)
. ++ .. .+-.+++- +++. .+|||+-.+.+..+||.+
T Consensus 223 ~~g~l~a-DvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 223 DGRHLTR-DIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp SSSSBCS-CEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred cCCcccc-CcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 1 11 12 56667663 4333 478888789999999993
No 299
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=84.99 E-value=13 Score=29.44 Aligned_cols=90 Identities=14% Similarity=0.071 Sum_probs=45.7
Q ss_pred EEecCCcEEEEECCCCCeEEE--ee----cCCCEEEEEecCCCCC-CCEEEEEeCC-----CcEEEEECCCccccc-cee
Q psy6415 4 AGYDNGDLKMFDLKTMSLKWE--TN----LKNGVCGVDFDRRDIP-MNKLVATTLE-----AKLFVFDLKTLHREK-GFA 70 (174)
Q Consensus 4 sgs~Dg~iklWDl~~~~~~~~--~~----~~~~V~sv~f~~~~~~-~~~l~s~s~D-----g~I~iWD~~~~~~~~-~~~ 70 (174)
.+..+|.|++++ .+..... .. .......|+|+|+-.. +...++-+.. +.|..|+........ ...
T Consensus 46 V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l 123 (352)
T 2ism_A 46 IAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVV 123 (352)
T ss_dssp EEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEE
T ss_pred EEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEE
Confidence 344557788777 3332211 11 1356889999995111 1334444432 678888876431100 001
Q ss_pred eeeec-----ccCcCcEEEEEEcCCCCCEEEEEc
Q psy6415 71 YLSEK-----AHKATTVWAAKHLPQNRDLFVTCG 99 (174)
Q Consensus 71 ~~~~~-----~h~~~~i~~v~fsP~~~~~las~s 99 (174)
...+. .|. -..++|.|+ +.++++-+
T Consensus 124 ~~~~p~~~~~~h~---~~~l~~~pd-G~Lyv~~G 153 (352)
T 2ism_A 124 LDGIPARPHGLHS---GGRIAFGPD-GMLYVTTG 153 (352)
T ss_dssp EEEECCCTTCCCC---CCCEEECTT-SCEEEECC
T ss_pred EEeCCCCCCCCcC---CceEEECCC-CCEEEEEC
Confidence 11122 232 258899995 46777654
No 300
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=84.72 E-value=12 Score=28.74 Aligned_cols=99 Identities=16% Similarity=0.144 Sum_probs=59.1
Q ss_pred cCCcEEEEECCCCCe---EEEe-------ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee--
Q psy6415 7 DNGDLKMFDLKTMSL---KWET-------NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE-- 74 (174)
Q Consensus 7 ~Dg~iklWDl~~~~~---~~~~-------~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~-- 74 (174)
.++.+.++++..... .... ....+.-.|+|+|.+ +.|.++.+.....||.++.......+.+...
T Consensus 89 ~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~---~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~ 165 (255)
T 3qqz_A 89 RDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQD---HTFWFFKEKNPIEVYKVNGLLSSNELHISKDKA 165 (255)
T ss_dssp TTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTT---TEEEEEEESSSEEEEEEESTTCSSCCEEEECHH
T ss_pred CCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCC---CEEEEEECcCCceEEEEcccccCCceeeecchh
Confidence 456777777654331 1111 123457899999964 6777776655556666542100001111000
Q ss_pred ---cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 75 ---KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 75 ---~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
..+-. .+.+++|+|..+.+++.....+.+-..|.
T Consensus 166 ~~~~~~~~-d~S~l~~dp~tg~lliLS~~s~~L~~~d~ 202 (255)
T 3qqz_A 166 LQRQFTLD-DVSGAEFNQQKNTLLVLSHESRALQEVTL 202 (255)
T ss_dssp HHHTCCSS-CCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred hccccccC-CceeEEEcCCCCeEEEEECCCCeEEEEcC
Confidence 01222 56799999988889999999999999988
No 301
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=83.79 E-value=20 Score=30.86 Aligned_cols=96 Identities=10% Similarity=-0.022 Sum_probs=58.1
Q ss_pred cCCcEEEEECCCCC--eEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415 7 DNGDLKMFDLKTMS--LKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWA 84 (174)
Q Consensus 7 ~Dg~iklWDl~~~~--~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~ 84 (174)
....|+.-|+.+.. .......-.....|+|++.+ +..+.+=...+.|+.+++....... ..+...-. ....
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~--~~ly~sD~~~~~I~r~~~~g~~~~~----~v~~~~~~-~P~G 88 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSH--GLIYWSDVSEEAIKRTEFNKTESVQ----NVVVSGLL-SPDG 88 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETTT--TEEEEEETTTTEEEEEEC-----CE----EEECSSCS-CEEE
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCC--CEEEEEECCCCeEEEEEccCCCceE----EEEeCCCC-CcCe
Confidence 34678888887653 22222233557899999863 2334455567889999987642100 01111113 5678
Q ss_pred EEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 85 AKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 85 v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
+++.+.++.++.+-...+.|.+.++
T Consensus 89 lAvD~~~~~ly~~d~~~~~I~v~~~ 113 (619)
T 3s94_A 89 LACDWLGEKLYWTDSETNRIEVSNL 113 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEEecCCEEEEEeCCCCEEEEEEC
Confidence 9999977888898889999999998
No 302
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=83.21 E-value=16 Score=29.05 Aligned_cols=92 Identities=11% Similarity=-0.009 Sum_probs=45.7
Q ss_pred EEecCCcEEEEECCCCCe-EEEe----ecCCCEEEEEecCCCCC-CCEEEEEeC---C----CcEEEEECCCcc--cc-c
Q psy6415 4 AGYDNGDLKMFDLKTMSL-KWET----NLKNGVCGVDFDRRDIP-MNKLVATTL---E----AKLFVFDLKTLH--RE-K 67 (174)
Q Consensus 4 sgs~Dg~iklWDl~~~~~-~~~~----~~~~~V~sv~f~~~~~~-~~~l~s~s~---D----g~I~iWD~~~~~--~~-~ 67 (174)
.+..+|.|+++|. .+.. .... ....+...|+|+|+-.. +...++-+. + +.|..|+..... .. .
T Consensus 44 V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~ 122 (354)
T 3a9g_A 44 VTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEV 122 (354)
T ss_dssp EEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEE
T ss_pred EEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCcc
Confidence 3445688888873 3431 1111 11356899999995111 233444332 3 567777766431 10 0
Q ss_pred ceeeeeec---ccCcCcEEEEEEcCCCCCEEEEEcC
Q psy6415 68 GFAYLSEK---AHKATTVWAAKHLPQNRDLFVTCGG 100 (174)
Q Consensus 68 ~~~~~~~~---~h~~~~i~~v~fsP~~~~~las~s~ 100 (174)
...+..+. .|. -..++|.|+ +.++++-+.
T Consensus 123 ~~l~~~~~~~~~h~---~~~l~~~pD-G~Lyvt~G~ 154 (354)
T 3a9g_A 123 KTLIDGIPGAYIHN---GGRIRFGPD-GMLYITTGD 154 (354)
T ss_dssp EEEEEEEECCSSCC---CCCEEECTT-SCEEEECCC
T ss_pred EEEEEcCCCCCCcC---CceEEECCC-CcEEEEECC
Confidence 00011111 232 357899995 567776543
No 303
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=82.77 E-value=24 Score=30.87 Aligned_cols=98 Identities=14% Similarity=0.153 Sum_probs=59.4
Q ss_pred EEEEecCCcEEEEECCCCCeEEEee-----cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee--ee
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETN-----LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL--SE 74 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~-----~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~--~~ 74 (174)
|-.|..++-|.+||.++++...... ....|.++..++++ + |-.|+. +.|.+||.++.+... +... ..
T Consensus 420 lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g---~-lwigt~-~Gl~~~~~~~~~~~~-~~~~~~~~ 493 (795)
T 4a2l_A 420 VYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEG---N-LWLGTL-SALVRFNPEQRSFTT-IEKEKDGT 493 (795)
T ss_dssp EEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSS---C-EEEEES-SCEEEEETTTTEEEE-CCBCTTCC
T ss_pred EEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCC---C-EEEEec-CceeEEeCCCCeEEE-cccccccc
Confidence 4567776778999998887654321 13568999888752 4 545555 458889987653211 1000 00
Q ss_pred cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.-... .|+++...++ +.+.+.+. . -|..||.
T Consensus 494 ~~~~~-~i~~i~~d~~-g~lWigt~-~-Gl~~~~~ 524 (795)
T 4a2l_A 494 PVVSK-QITTLFRDSH-KRLWIGGE-E-GLSVFKQ 524 (795)
T ss_dssp BCCCC-CEEEEEECTT-CCEEEEES-S-CEEEEEE
T ss_pred ccCCc-eEEEEEECCC-CCEEEEeC-C-ceEEEeC
Confidence 01224 7899988885 44555443 4 4888887
No 304
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=81.91 E-value=16 Score=28.42 Aligned_cols=95 Identities=8% Similarity=-0.098 Sum_probs=58.3
Q ss_pred cCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEe--CCCcEEEEECCCcccccceeeeeecccCcCcEE
Q psy6415 7 DNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATT--LEAKLFVFDLKTLHREKGFAYLSEKAHKATTVW 83 (174)
Q Consensus 7 ~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s--~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~ 83 (174)
..+.|.+.++.+....... ......+.|+++|.. ..|..+. ..+.|...|+...... . + ....-. .-+
T Consensus 99 ~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~---g~ly~td~~~~~~I~r~~~dG~~~~-~--~--~~~~l~-~Pn 169 (318)
T 3sov_A 99 ETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSS---GFMYWTDWGEVPKIERAGMDGSSRF-I--I--INSEIY-WPN 169 (318)
T ss_dssp TTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGG---TEEEEEECSSSCEEEEEETTSCSCE-E--E--ECSSCS-CEE
T ss_pred CCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCC---CEEEEEecCCCCEEEEEEcCCCCeE-E--E--EECCCC-Ccc
Confidence 3456667776654332222 223456889999853 3444333 3578888888753211 0 1 011112 457
Q ss_pred EEEEcCCCCCEEEEEcCCCcEEEEecc
Q psy6415 84 AAKHLPQNRDLFVTCGGSGSLNLWQLV 110 (174)
Q Consensus 84 ~v~fsP~~~~~las~s~Dg~V~lWd~~ 110 (174)
.++|+|+++.++.+=+..+.|..+|++
T Consensus 170 glavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 170 GLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 899999878888888888999999984
No 305
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=81.42 E-value=9.1 Score=32.93 Aligned_cols=73 Identities=14% Similarity=0.049 Sum_probs=44.0
Q ss_pred EEEecCCCCCCCEEEEEeCCC-----------cEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcC-
Q psy6415 33 GVDFDRRDIPMNKLVATTLEA-----------KLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGG- 100 (174)
Q Consensus 33 sv~f~~~~~~~~~l~s~s~Dg-----------~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~- 100 (174)
++++.|.+ +..++.|+.+. .+.+||+.+.+...... ....+.. ...++++.+ ++.+++.||.
T Consensus 190 ~~av~~~~--g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~--~~~~~~~-~~~~~~~~~-~g~lyv~GG~~ 263 (656)
T 1k3i_A 190 AAAIEPTS--GRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTV--TVTKHDM-FCPGISMDG-NGQIVVTGGND 263 (656)
T ss_dssp EEEEETTT--TEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEE--EECSCCC-SSCEEEECT-TSCEEEECSSS
T ss_pred eEEEEecC--CEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcc--cCCCCCC-ccccccCCC-CCCEEEeCCCC
Confidence 44555521 36777887543 58899998865332111 1112222 333567777 5678898884
Q ss_pred CCcEEEEeccc
Q psy6415 101 SGSLNLWQLVS 111 (174)
Q Consensus 101 Dg~V~lWd~~~ 111 (174)
+..|.+||.++
T Consensus 264 ~~~v~~yd~~t 274 (656)
T 1k3i_A 264 AKKTSLYDSSS 274 (656)
T ss_dssp TTCEEEEEGGG
T ss_pred CCceEEecCcC
Confidence 56899999854
No 306
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=80.34 E-value=29 Score=30.25 Aligned_cols=95 Identities=14% Similarity=0.118 Sum_probs=57.2
Q ss_pred EEEecCCcEEEEECCCCCeEEEe----ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee-ccc
Q psy6415 3 VAGYDNGDLKMFDLKTMSLKWET----NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE-KAH 77 (174)
Q Consensus 3 asgs~Dg~iklWDl~~~~~~~~~----~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~-~~h 77 (174)
-.|..++-|..||.+++...... .....|.++..+++ ..|-.|+.++.|..+|.++.+..+ + .. ...
T Consensus 377 Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~----g~lWigt~~~Gl~~~~~~~~~~~~-~---~~~~~~ 448 (781)
T 3v9f_A 377 WIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSE----GNLWFGTYLGNISYYNTRLKKFQI-I---ELEKNE 448 (781)
T ss_dssp EEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTT----SCEEEEETTEEEEEECSSSCEEEE-C---CSTTTC
T ss_pred EEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCC----CCEEEEeccCCEEEEcCCCCcEEE-e---ccCCCC
Confidence 34565666888888765432211 12356889988765 346668887789999987653211 1 10 112
Q ss_pred CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.. .|+++...++ +.+.+. +.. -|..+|.
T Consensus 449 ~~-~v~~i~~d~~-g~lwig-t~~-Gl~~~~~ 476 (781)
T 3v9f_A 449 LL-DVRVFYEDKN-KKIWIG-THA-GVFVIDL 476 (781)
T ss_dssp CC-CEEEEEECTT-SEEEEE-ETT-EEEEEES
T ss_pred CC-eEEEEEECCC-CCEEEE-ECC-ceEEEeC
Confidence 34 7999988874 445553 334 4888887
No 307
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=79.80 E-value=19 Score=27.88 Aligned_cols=70 Identities=10% Similarity=0.030 Sum_probs=38.8
Q ss_pred CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeee-ecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEE
Q psy6415 29 NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLS-EKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLW 107 (174)
Q Consensus 29 ~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~-~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lW 107 (174)
..+.+|++.++ ..++.++.++.| ++....+. ...... ...... .+++|.|.+ +. .++.++.+|+|.-+
T Consensus 250 ~~~~~v~~~~~----~~~~~~g~~g~i-~~S~DgG~---tW~~~~~~~~~~~-~~~~v~~~~-~~-~~~~~G~~G~i~~~ 318 (327)
T 2xbg_A 250 VGFLDLAYRTP----NEVWLAGGAGAL-LCSQDGGQ---TWQQDVDVKKVPS-NFYKILFFS-PD-QGFILGQKGILLRY 318 (327)
T ss_dssp SCEEEEEESSS----SCEEEEESTTCE-EEESSTTS---SCEECGGGTTSSS-CCCEEEEEE-TT-EEEEECSTTEEEEE
T ss_pred cceEEEEecCC----CEEEEEeCCCeE-EEeCCCCc---ccEEcCccCCCCC-CeEEEEEEC-CC-ceEEEcCCceEEEE
Confidence 35889999874 345445557777 33333322 111000 011234 688999975 33 45667889977655
Q ss_pred ec
Q psy6415 108 QL 109 (174)
Q Consensus 108 d~ 109 (174)
+-
T Consensus 319 ~~ 320 (327)
T 2xbg_A 319 VT 320 (327)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 308
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=79.60 E-value=10 Score=30.55 Aligned_cols=29 Identities=3% Similarity=0.087 Sum_probs=24.9
Q ss_pred cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
--+.++|+|++..++++-+..++|..|++
T Consensus 222 ~pNGia~spDg~~lYvadt~~~~I~~~~~ 250 (355)
T 3sre_A 222 FANGINISPDGKYVYIAELLAHKIHVYEK 250 (355)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred ccCcceECCCCCEEEEEeCCCCeEEEEEE
Confidence 45899999977678888888999999998
No 309
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=79.49 E-value=25 Score=29.02 Aligned_cols=94 Identities=11% Similarity=0.033 Sum_probs=45.2
Q ss_pred EecCC-cEEEEECCCCCeEEE--ee-------cCCCEEEEEecCCCCCCCEE-EEEeC------------CCcEEEEECC
Q psy6415 5 GYDNG-DLKMFDLKTMSLKWE--TN-------LKNGVCGVDFDRRDIPMNKL-VATTL------------EAKLFVFDLK 61 (174)
Q Consensus 5 gs~Dg-~iklWDl~~~~~~~~--~~-------~~~~V~sv~f~~~~~~~~~l-~s~s~------------Dg~I~iWD~~ 61 (174)
+...| .|++++..++..... .. ...++..|+|+|+-.....| ++-+. ...|.-|++.
T Consensus 43 ~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~ 122 (454)
T 1cru_A 43 TERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYN 122 (454)
T ss_dssp EETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEE
T ss_pred EEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEEC
Confidence 34444 688887655544321 11 23567899999841111344 44332 2345555554
Q ss_pred Ccc-cc--cceeeeeec-ccCcCcEEEEEEcCCCCCEEEEEcC
Q psy6415 62 TLH-RE--KGFAYLSEK-AHKATTVWAAKHLPQNRDLFVTCGG 100 (174)
Q Consensus 62 ~~~-~~--~~~~~~~~~-~h~~~~i~~v~fsP~~~~~las~s~ 100 (174)
... .+ ....+..+. .... ....++|.|+ +.++++.+.
T Consensus 123 ~~~~~~~~~~~i~~~~p~~~~H-~~~~l~f~pD-G~Lyv~~Gd 163 (454)
T 1cru_A 123 KSTDTLEKPVDLLAGLPSSKDH-QSGRLVIGPD-QKIYYTIGD 163 (454)
T ss_dssp TTTTEEEEEEEEEEEECCCSSC-CEEEEEECTT-SCEEEEECC
T ss_pred CCCCCcCCcEEEEEcCCCCCCC-CCCeEeECCC-CeEEEEECC
Confidence 321 00 001111111 1112 3578999995 567776554
No 310
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=78.51 E-value=20 Score=27.36 Aligned_cols=101 Identities=6% Similarity=0.076 Sum_probs=58.9
Q ss_pred EEEecCCcEEEEECCCCCeEEEeec--CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee----cc
Q psy6415 3 VAGYDNGDLKMFDLKTMSLKWETNL--KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE----KA 76 (174)
Q Consensus 3 asgs~Dg~iklWDl~~~~~~~~~~~--~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~----~~ 76 (174)
|....++.|...|+. ++....... ....-.|++.+++ .++++.-.++.+.++++.............+ ..
T Consensus 43 aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g---~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~ 118 (255)
T 3qqz_A 43 STINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDN---QFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESP 118 (255)
T ss_dssp EEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTT---EEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCC
T ss_pred EEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCC---EEEEEECCCCcEEEEEcCCCCeeeeeeeecccccccc
Confidence 345557788888887 666555432 2457778888752 3445555677888988765432110011111 12
Q ss_pred cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.+. ..-.++|.|.+..+++ +.+.....||.+
T Consensus 119 ~N~-g~EGLA~d~~~~~L~v-a~E~~p~~i~~~ 149 (255)
T 3qqz_A 119 TNC-GFEGLAYSRQDHTFWF-FKEKNPIEVYKV 149 (255)
T ss_dssp CSS-CCEEEEEETTTTEEEE-EEESSSEEEEEE
T ss_pred ccC-CcceEEEeCCCCEEEE-EECcCCceEEEE
Confidence 233 6789999997655555 555555666666
No 311
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=78.43 E-value=32 Score=29.68 Aligned_cols=95 Identities=12% Similarity=0.003 Sum_probs=63.7
Q ss_pred cCCcEEEEECCCCCeEEEee--cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415 7 DNGDLKMFDLKTMSLKWETN--LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWA 84 (174)
Q Consensus 7 ~Dg~iklWDl~~~~~~~~~~--~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~ 84 (174)
....|+.-|+.+........ .-..+..|+|++.. +..+.+-..++.|+.+++...... . .+...-. ....
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~--~~lywtD~~~~~I~r~~~~g~~~~-~----v~~~g~~-~P~G 84 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTD--NRIYWTDISLKTISRAFMNGSALE-H----VVEFGLD-YPEG 84 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTT--TEEEEEETTTTEEEEEETTSCSCE-E----EECSSCS-CCCE
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCC--CEEEEEECCCCeEEEEECCCCCcE-E----EEeCCCC-Ccce
Confidence 45788999998765433322 22467899999864 344556678899999998764311 1 1111112 3457
Q ss_pred EEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 85 AKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 85 v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
+++.+.++.++.+-...+.|.+.++
T Consensus 85 lAvD~~~~~LY~tD~~~~~I~v~~~ 109 (628)
T 4a0p_A 85 MAVDWLGKNLYWADTGTNRIEVSKL 109 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEEeCCCEEEEEECCCCEEEEEec
Confidence 8888777888898888999999988
No 312
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=75.68 E-value=27 Score=29.50 Aligned_cols=75 Identities=11% Similarity=0.054 Sum_probs=48.0
Q ss_pred EEEEEecCCCCCCCEEEEEeCCCcEEEEECC-------Cccc---c-cc----e-eeeeecccCcCcEEEEEEcCCCCCE
Q psy6415 31 VCGVDFDRRDIPMNKLVATTLEAKLFVFDLK-------TLHR---E-KG----F-AYLSEKAHKATTVWAAKHLPQNRDL 94 (174)
Q Consensus 31 V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~-------~~~~---~-~~----~-~~~~~~~h~~~~i~~v~fsP~~~~~ 94 (174)
.+.++++|++ +.++++-..++.|..+|+. ++.. . .. + .+... +... .-+.|+|+|++..+
T Consensus 249 p~giavdp~~--g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~-~p~~ia~~p~G~~l 324 (496)
T 3kya_A 249 CNGATIHPIN--GELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI-ADPS-WEFQIFIHPTGKYA 324 (496)
T ss_dssp CCCEEECTTT--CCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC-SSSS-CCEEEEECTTSSEE
T ss_pred ceEEEEcCCC--CeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEec-CCCC-CceEEEEcCCCCEE
Confidence 3567888853 4666777788899999997 4332 0 00 0 01111 1222 45789999965446
Q ss_pred EEEEcCCCcEEEEec
Q psy6415 95 FVTCGGSGSLNLWQL 109 (174)
Q Consensus 95 las~s~Dg~V~lWd~ 109 (174)
+++=+..++|+.++.
T Consensus 325 YvaD~~~h~I~kid~ 339 (496)
T 3kya_A 325 YFGVINNHYFMRSDY 339 (496)
T ss_dssp EEEETTTTEEEEEEE
T ss_pred EEEeCCCCEEEEEec
Confidence 777788899999776
No 313
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=73.66 E-value=50 Score=30.87 Aligned_cols=90 Identities=10% Similarity=0.072 Sum_probs=53.1
Q ss_pred cEEEEECCCCCeEEEeec--CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEE
Q psy6415 10 DLKMFDLKTMSLKWETNL--KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKH 87 (174)
Q Consensus 10 ~iklWDl~~~~~~~~~~~--~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~f 87 (174)
.|++.+............ ...|...+.+. .+++.++ .+.|.++.+...+.. ..... .-.. +|.++++
T Consensus 493 ~Irli~~~~~~~~~~w~~p~~~~I~~As~n~-----~~vvva~-g~~l~~fel~~~~L~-~~~~~---~l~~-evscl~i 561 (1158)
T 3ei3_A 493 SVRLVSQEPKALVSEWKEPQAKNISVASCNS-----SQVVVAV-GRALYYLQIHPQELR-QISHT---EMEH-EVACLDI 561 (1158)
T ss_dssp CEEEEESSSCCEEEEECCTTCCCCCEEEECS-----SEEEEEE-TTEEEEEEEETTEEE-EEEEE---ECSS-CEEEEEC
T ss_pred EEEEEECCCCeEEEEEECCCCCEEEEEEeCC-----CEEEEEE-CCEEEEEEeeCCcee-eeccc---CCCC-ceEEEEe
Confidence 355666544333333222 23455555553 4566665 678888887753211 11111 2234 8999999
Q ss_pred cCCC-----CCEEEEEcC-CCcEEEEecc
Q psy6415 88 LPQN-----RDLFVTCGG-SGSLNLWQLV 110 (174)
Q Consensus 88 sP~~-----~~~las~s~-Dg~V~lWd~~ 110 (174)
.|.. ..++|.|.. |++|+|+++.
T Consensus 562 ~~~~~~~~~s~~~aVg~~~d~tv~I~sL~ 590 (1158)
T 3ei3_A 562 TPLGDSNGLSPLCAIGLWTDISARILKLP 590 (1158)
T ss_dssp CCCSSSTTCCSEEEEEETTTTEEEEEETT
T ss_pred ecCCCCcccccEEEEEECCCCEEEEEECC
Confidence 8742 357888886 9999999994
No 314
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=70.56 E-value=53 Score=28.54 Aligned_cols=95 Identities=15% Similarity=0.138 Sum_probs=56.3
Q ss_pred EEecCCcEEEEECCCCCeEEEee---cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec---cc
Q psy6415 4 AGYDNGDLKMFDLKTMSLKWETN---LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK---AH 77 (174)
Q Consensus 4 sgs~Dg~iklWDl~~~~~~~~~~---~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~---~h 77 (174)
.|..++-|..+|.++++...... ....|.++..+++ ..|-.|+. +-|.++|.++.+... +. ... ..
T Consensus 422 igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~----g~lwigt~-~Gl~~~~~~~~~~~~-~~--~~~~~~~~ 493 (781)
T 3v9f_A 422 FGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKN----KKIWIGTH-AGVFVIDLASKKVIH-HY--DTSNSQLL 493 (781)
T ss_dssp EEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTT----SEEEEEET-TEEEEEESSSSSCCE-EE--CTTTSSCS
T ss_pred EEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCC----CCEEEEEC-CceEEEeCCCCeEEe-cc--cCcccccc
Confidence 45555667788887776543221 2356899988875 45666666 568899987754221 10 000 01
Q ss_pred CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
.. .|.++...++ +.+.+.+..+| |..||.
T Consensus 494 ~~-~i~~i~~d~~-g~lWigt~~~G-l~~~~~ 522 (781)
T 3v9f_A 494 EN-FVRSIAQDSE-GRFWIGTFGGG-VGIYTP 522 (781)
T ss_dssp CS-CEEEEEECTT-CCEEEEESSSC-EEEECT
T ss_pred cc-eeEEEEEcCC-CCEEEEEcCCC-EEEEeC
Confidence 24 7899988884 45555433344 666776
No 315
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=69.95 E-value=13 Score=30.48 Aligned_cols=73 Identities=8% Similarity=0.006 Sum_probs=46.9
Q ss_pred EEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415 31 VCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 31 V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~ 109 (174)
...++++|.. ++.+++-..++.|+.+|..+...... +... +... .-..++|+|++..++++-...++|+.+++
T Consensus 230 P~giavd~~~--G~lyv~d~~~~~V~~~d~~~g~~~~~--~~~~-~~~~-~~~~ia~dpdG~~LYvad~~~~~I~~~~~ 302 (433)
T 4hw6_A 230 AKTCAVHPQN--GKIYYTRYHHAMISSYDPATGTLTEE--EVMM-DTKG-SNFHIVWHPTGDWAYIIYNGKHCIYRVDY 302 (433)
T ss_dssp BCCCEECTTT--CCEEECBTTCSEEEEECTTTCCEEEE--EEEC-SCCS-SCEEEEECTTSSEEEEEETTTTEEEEEEB
T ss_pred CCEEEEeCCC--CeEEEEECCCCEEEEEECCCCeEEEE--Eecc-CCCC-CcccEEEeCCCCEEEEEeCCCCEEEEEeC
Confidence 3457788732 35666666788899999875432111 1111 1112 23469999966558888888999999887
No 316
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=69.77 E-value=12 Score=29.98 Aligned_cols=62 Identities=11% Similarity=0.240 Sum_probs=40.5
Q ss_pred CEEEEecCCcEEEEECCCCCeEEEeecC--CCEEEEEecCCCCCCCEEEEE--eCCCcEEEEECCCc
Q psy6415 1 MVVAGYDNGDLKMFDLKTMSLKWETNLK--NGVCGVDFDRRDIPMNKLVAT--TLEAKLFVFDLKTL 63 (174)
Q Consensus 1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~--~~V~sv~f~~~~~~~~~l~s~--s~Dg~I~iWD~~~~ 63 (174)
+|+.++.||.|.-.|.++|+.++..... ..+....-... .....++.. +.||.|..+|.+++
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~-~~~~~~~vv~p~~dG~l~a~~~~~G 77 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSR-LETYETLIIEPFGDGNIYYFNAHQG 77 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCT-TTSSEEEEECCSTTTEEEEEETTTE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCcc-ccCCcEEEEEECCCCEEEEEECCCC
Confidence 3678999999999999999999887543 23322211110 001234433 68999999998765
No 317
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=68.75 E-value=56 Score=28.07 Aligned_cols=72 Identities=18% Similarity=-0.002 Sum_probs=45.4
Q ss_pred CEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcC-CCcEEEEe
Q psy6415 30 GVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGG-SGSLNLWQ 108 (174)
Q Consensus 30 ~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~-Dg~V~lWd 108 (174)
....+++++.+ ++...+-+..+.|.+.++..... .. + ....-. .-+.|++.|..+.++.|-.. ...|.-.+
T Consensus 393 ~p~GlAvD~~~--~~lY~tD~~~~~I~v~~~~G~~~-~~--l--~~~~l~-~P~~iavdp~~G~ly~tD~g~~~~I~r~~ 464 (619)
T 3s94_A 393 HPDGIAVDWVA--RNLYWTDTGTDRIEVTRLNGTMR-KI--L--ISEDLE-EPRAIVLDPMVGYMYWTDWGEIPKIERAA 464 (619)
T ss_dssp CCCEEEEETTT--TEEEEEETTTTEEEEEETTSCSC-EE--E--ECTTCC-SEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred CcCceEEeccc--CcEEEEeCCCCcEEEEeCCCCeE-EE--E--EECCCC-CeeeEEEEcCCCcEEEecCCCCCEEEEEc
Confidence 45678887643 35666767888999999886431 11 1 111122 46899999976777777533 36666666
Q ss_pred c
Q psy6415 109 L 109 (174)
Q Consensus 109 ~ 109 (174)
+
T Consensus 465 ~ 465 (619)
T 3s94_A 465 L 465 (619)
T ss_dssp T
T ss_pred c
Confidence 6
No 318
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=67.55 E-value=46 Score=26.59 Aligned_cols=91 Identities=12% Similarity=0.072 Sum_probs=46.5
Q ss_pred CCcEEEEECCCCCeEEEe-------ecCCCEEEEEecCCCC-CCCEEEEE--eCCCcEEEEECCCcc----cc-c-ceee
Q psy6415 8 NGDLKMFDLKTMSLKWET-------NLKNGVCGVDFDRRDI-PMNKLVAT--TLEAKLFVFDLKTLH----RE-K-GFAY 71 (174)
Q Consensus 8 Dg~iklWDl~~~~~~~~~-------~~~~~V~sv~f~~~~~-~~~~l~s~--s~Dg~I~iWD~~~~~----~~-~-~~~~ 71 (174)
.|.|++++.+++...... ....+...|+|+|+-. ++...++= ..++.|.-|.+.... .. . ...+
T Consensus 52 ~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~ 131 (347)
T 3das_A 52 EATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVF 131 (347)
T ss_dssp TCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEE
T ss_pred CCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEE
Confidence 788888887666543211 1245689999998410 12333432 244555556555411 00 0 0111
Q ss_pred eee---cccCcCcEEEEEEcCCCCCEEEEEcCCC
Q psy6415 72 LSE---KAHKATTVWAAKHLPQNRDLFVTCGGSG 102 (174)
Q Consensus 72 ~~~---~~h~~~~i~~v~fsP~~~~~las~s~Dg 102 (174)
..+ ..|. -..++|.|+ +.++++.+..+
T Consensus 132 ~~~p~~~~H~---g~~l~fgpD-G~Lyvt~Gd~~ 161 (347)
T 3das_A 132 RGIPKGVIHN---GGRIAFGPD-KMLYAGTGESG 161 (347)
T ss_dssp EEECCCSSCC---CCCEEECTT-SCEEEECBCTT
T ss_pred EcCCCCCCcc---CccccCCCC-CCEEEEECCCC
Confidence 111 1233 357899995 56777765443
No 319
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=63.95 E-value=19 Score=31.45 Aligned_cols=98 Identities=9% Similarity=0.058 Sum_probs=62.2
Q ss_pred cEEEEECCC----C-CeEEEeecCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCccc---------ccceeeeee
Q psy6415 10 DLKMFDLKT----M-SLKWETNLKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHR---------EKGFAYLSE 74 (174)
Q Consensus 10 ~iklWDl~~----~-~~~~~~~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~---------~~~~~~~~~ 74 (174)
.|++-|.+. + ..............+.++|++ .++ +++-.+.++.++|++.... ... .....
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDG---kyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~-~~ae~ 374 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDG---KYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDV-IVGEP 374 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTS---CEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGG-EEECC
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCC---CEEEEcCCCCCeEEEEEeehhhhhhhccccCcccc-eEeec
Confidence 477888876 2 233333334455667889985 555 5667999999999986321 100 01111
Q ss_pred cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccc
Q psy6415 75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALR 114 (174)
Q Consensus 75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~ 114 (174)
+.- - .-+..+|.++ +..+.|---|..|--|+++.+.|
T Consensus 375 e~G-l-GPlHt~Fd~~-G~aYTtlfidSqvvkWni~~a~~ 411 (638)
T 3sbq_A 375 ELG-L-GPLHTTFDGR-GNAYTTLFIDSQVVKWNMEEAVR 411 (638)
T ss_dssp BCC-S-CEEEEEECSS-SEEEEEETTTTEEEEEEHHHHHH
T ss_pred cCC-C-cccEEEECCC-CceEeeeeecceEEEEeccHHHH
Confidence 111 1 3478899995 46777778899999999966544
No 320
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=63.64 E-value=8.8 Score=34.19 Aligned_cols=32 Identities=19% Similarity=0.251 Sum_probs=25.0
Q ss_pred EEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccc
Q psy6415 31 VCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREK 67 (174)
Q Consensus 31 V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~ 67 (174)
|.++.+. ...|++-+.|.++|+||+++..++.
T Consensus 224 Is~~~~~-----~~fLftL~~Dh~LRiWsL~t~~lv~ 255 (729)
T 3f7f_A 224 ISCKLFH-----ERYLIVLTQNCHLKIWDLTSFTLIQ 255 (729)
T ss_dssp EEEEEET-----TTEEEEEETTCEEEEEETTTTEEEE
T ss_pred EEEeccC-----CcEEEEEEcCCeEEEEEcCCCceEE
Confidence 5555554 2789999999999999999987543
No 321
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=59.43 E-value=5.4 Score=37.10 Aligned_cols=25 Identities=40% Similarity=0.379 Sum_probs=21.3
Q ss_pred CEEEEEeCCCcEEEEECCCcccccc
Q psy6415 44 NKLVATTLEAKLFVFDLKTLHREKG 68 (174)
Q Consensus 44 ~~l~s~s~Dg~I~iWD~~~~~~~~~ 68 (174)
..+++-+.|+++||||+++++++..
T Consensus 250 ~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 250 NVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp TEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred cEEEEEeCCCEEEEEECCCCCeEEe
Confidence 6788999999999999999876533
No 322
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=58.95 E-value=1.2e+02 Score=28.40 Aligned_cols=97 Identities=10% Similarity=0.067 Sum_probs=57.2
Q ss_pred CCcEEEEECCCCCeEE--EeecCCCEEEEEecCCCC---CCCEEEEEeC-CCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415 8 NGDLKMFDLKTMSLKW--ETNLKNGVCGVDFDRRDI---PMNKLVATTL-EAKLFVFDLKTLHREKGFAYLSEKAHKATT 81 (174)
Q Consensus 8 Dg~iklWDl~~~~~~~--~~~~~~~V~sv~f~~~~~---~~~~l~s~s~-Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~ 81 (174)
++.+.++.+..+++.. .......|.++++.|... ..+.+|.|.. |++|+|+++.+.+.... ..+.. .. .
T Consensus 531 g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~---~~L~~-~~-~ 605 (1158)
T 3ei3_A 531 GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHK---EMLGG-EI-I 605 (1158)
T ss_dssp TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEE---EECCS-SC-C
T ss_pred CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEE---EECCC-CC-C
Confidence 5677777776554332 233467899999986421 1357888886 99999999987543321 12211 11 2
Q ss_pred EEEEEEcCC-CCCEEEEEcCCCcEEEEec
Q psy6415 82 VWAAKHLPQ-NRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 82 i~~v~fsP~-~~~~las~s~Dg~V~lWd~ 109 (174)
..++.+... +..+|..|-.||.+--+.+
T Consensus 606 p~si~l~~~~~~~~L~igl~dG~l~~~~~ 634 (1158)
T 3ei3_A 606 PRSILMTTFESSHYLLCALGDGALFYFGL 634 (1158)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEE
T ss_pred CcEEEEEEeCCCcEEEEEeCCCeEEEEEE
Confidence 233332211 2345667888888766655
No 323
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=56.12 E-value=9.3 Score=34.02 Aligned_cols=25 Identities=24% Similarity=0.411 Sum_probs=21.4
Q ss_pred EEEEecCCcEEEEECCCCCeEEEee
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWETN 26 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~~ 26 (174)
|++-+.|.++|+||+++++++....
T Consensus 234 LftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 234 LIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEEEcCCeEEEEEcCCCceEEeec
Confidence 6788999999999999999876543
No 324
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=51.69 E-value=11 Score=35.09 Aligned_cols=24 Identities=25% Similarity=0.069 Sum_probs=21.0
Q ss_pred EEEEecCCcEEEEECCCCCeEEEe
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWET 25 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~ 25 (174)
|++-+.|+++|+||+.+++++...
T Consensus 252 lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 252 LVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp EEEEBTTCEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCEEEEEECCCCCeEEee
Confidence 678899999999999999987654
No 325
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=50.60 E-value=12 Score=34.23 Aligned_cols=24 Identities=25% Similarity=0.069 Sum_probs=20.9
Q ss_pred EEEEecCCcEEEEECCCCCeEEEe
Q psy6415 2 VVAGYDNGDLKMFDLKTMSLKWET 25 (174)
Q Consensus 2 lasgs~Dg~iklWDl~~~~~~~~~ 25 (174)
|.+-+.|+++|+|++.+++++...
T Consensus 250 lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 250 LVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp EEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEEECCCEEEEEECCCCCeEeee
Confidence 678899999999999999987654
No 326
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=49.58 E-value=83 Score=23.88 Aligned_cols=73 Identities=10% Similarity=-0.032 Sum_probs=38.2
Q ss_pred CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc-CcEEEEEEcCCCCCEEEEEcCCCcEEEE
Q psy6415 29 NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA-TTVWAAKHLPQNRDLFVTCGGSGSLNLW 107 (174)
Q Consensus 29 ~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~-~~i~~v~fsP~~~~~las~s~Dg~V~lW 107 (174)
..+..++|+|++ .+.+. .+|.+.--+..+.....=+...+..+..+ ....++.|.| ++.+.|+ .||.|.-|
T Consensus 41 ~~~~~laf~P~G---~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~-~G~LYav--~dG~iyr~ 112 (236)
T 1tl2_A 41 SNFKFLFLSPGG---ELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDP-NGYLYAV--SKDKLYKA 112 (236)
T ss_dssp TTCSEEEECTTS---CEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECT-TSCEEEE--ETTEEEEE
T ss_pred ccceeEEECCCc---cEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECC-CCCEEEe--CCCEEEEe
Confidence 457799999963 55555 66765554543321100000000001000 0125788999 5667776 67988766
Q ss_pred ec
Q psy6415 108 QL 109 (174)
Q Consensus 108 d~ 109 (174)
+-
T Consensus 113 ~p 114 (236)
T 1tl2_A 113 SP 114 (236)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 327
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=39.31 E-value=1.5e+02 Score=23.94 Aligned_cols=55 Identities=13% Similarity=0.125 Sum_probs=34.2
Q ss_pred cEEEEECCCc--ccccceeee-eecccCcCcEEEEEEc---CC----CCCEEEEEcCCCcEEEEec
Q psy6415 54 KLFVFDLKTL--HREKGFAYL-SEKAHKATTVWAAKHL---PQ----NRDLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 54 ~I~iWD~~~~--~~~~~~~~~-~~~~h~~~~i~~v~fs---P~----~~~~las~s~Dg~V~lWd~ 109 (174)
+|-+||+++. +.++.+.+. ....... -+..+++. |. +...++|=+...-|-++|+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S-~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl 188 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPT-YFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDH 188 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGG-GEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEET
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCC-ccceEEEecccCCCCCCccEEEEEcCCCCcEEEEEC
Confidence 5778999987 655444321 1111123 57888877 32 2335666677888999999
No 328
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=38.88 E-value=75 Score=24.87 Aligned_cols=27 Identities=33% Similarity=0.731 Sum_probs=20.5
Q ss_pred cEEEEEEcCCCCC-EEEEEcCCCcEEEEec
Q psy6415 81 TVWAAKHLPQNRD-LFVTCGGSGSLNLWQL 109 (174)
Q Consensus 81 ~i~~v~fsP~~~~-~las~s~Dg~V~lWd~ 109 (174)
.-+.++|.|+ +. +|++- ..|.|++++.
T Consensus 19 ~P~~i~~~pd-G~~l~V~e-~~G~i~~~~~ 46 (353)
T 2g8s_A 19 HPWALAFLPD-NHGMLITL-RGGELRHWQA 46 (353)
T ss_dssp SEEEEEECST-TCCEEEEE-TTTEEEEEET
T ss_pred CcEEEEEcCC-CCEEEEEe-CCceEEEEeC
Confidence 4589999995 56 77754 5689988875
No 329
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=38.53 E-value=48 Score=27.53 Aligned_cols=28 Identities=18% Similarity=0.213 Sum_probs=21.0
Q ss_pred cEEEEEEcCCCC-CEEEEEcCCCcEEEEec
Q psy6415 81 TVWAAKHLPQNR-DLFVTCGGSGSLNLWQL 109 (174)
Q Consensus 81 ~i~~v~fsP~~~-~~las~s~Dg~V~lWd~ 109 (174)
.-|.++|.|++. .+|++ ...|.|++++.
T Consensus 15 ~P~~~a~~pdG~~rl~V~-er~G~i~~~~~ 43 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFIL-EKEGYVKILTP 43 (463)
T ss_dssp SEEEEECCSSSSCCEEEE-ETTTEEEEECT
T ss_pred CceEEEECCCCCeEEEEE-eCCceEEEEeC
Confidence 458999999653 47775 56799999875
No 330
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=37.62 E-value=1.3e+02 Score=22.76 Aligned_cols=64 Identities=13% Similarity=0.040 Sum_probs=37.0
Q ss_pred EEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceee-eee--cccCcCcEEEEEEcCCCCCEEEEEcCCCcEE
Q psy6415 32 CGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAY-LSE--KAHKATTVWAAKHLPQNRDLFVTCGGSGSLN 105 (174)
Q Consensus 32 ~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~-~~~--~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~ 105 (174)
.++.|+|++ .+.++ .||.|.-+|-.+.... .... .+. ..-=. .+..|.|.| ++.+.|.. ||.++
T Consensus 91 ~a~~fD~~G---~LYav--~dG~iyr~~pP~~~~~-~Wl~~a~~vg~~gw~-~~~~lff~p-~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 91 QFLFFDPNG---YLYAV--SKDKLYKASPPQSDTD-NWIARATEVGSGGWS-GFKFLFFHP-NGYLYAVH--GQQFY 157 (236)
T ss_dssp SEEEECTTS---CEEEE--ETTEEEEESCCCSTTC-CHHHHSEEEECSSGG-GEEEEEECT-TSCEEEEE--TTEEE
T ss_pred eEEEECCCC---CEEEe--CCCEEEEeCCCcCCCC-ceeccccEeccCCCC-ceEEEEECC-CceEEEEe--CCcEE
Confidence 678899864 55555 5699987775432211 0000 000 00113 688999999 56777766 77743
No 331
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=28.08 E-value=1.8e+02 Score=21.41 Aligned_cols=89 Identities=12% Similarity=0.138 Sum_probs=44.1
Q ss_pred CcEEEEECCCCCeEEEeecC---CCEEEEEecCCCCCCCEEEEEeCC-----CcEEEEECCCcccccceeeeeecccCcC
Q psy6415 9 GDLKMFDLKTMSLKWETNLK---NGVCGVDFDRRDIPMNKLVATTLE-----AKLFVFDLKTLHREKGFAYLSEKAHKAT 80 (174)
Q Consensus 9 g~iklWDl~~~~~~~~~~~~---~~V~sv~f~~~~~~~~~l~s~s~D-----g~I~iWD~~~~~~~~~~~~~~~~~h~~~ 80 (174)
..+.+||+.+++-....... ..-..+.++ +..++.|+.+ ..+.+||+++.+-.. +..+.....
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~-----~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~---~~~~~~~r~- 243 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMSTRRSGAGVGVLN-----NLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ---VADMNMCRR- 243 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEET-----TEEEEECCBSSSSBCCCEEEEETTTTEEEE---ECCCSSCCB-
T ss_pred cEEEEEeCCCCcEEECCCCccccccccEEEEC-----CEEEEECCCCCCcccceEEEEeCCCCCEee---CCCCCCccc-
Confidence 35778888776533221111 112233332 2566777654 468899998754211 001100000
Q ss_pred cEEEEEEcCCCCCEEEEEcCCC-----cEEEEec
Q psy6415 81 TVWAAKHLPQNRDLFVTCGGSG-----SLNLWQL 109 (174)
Q Consensus 81 ~i~~v~fsP~~~~~las~s~Dg-----~V~lWd~ 109 (174)
.-..+.+ ++.+++.|+.++ .|.+||.
T Consensus 244 ~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 244 NAGVCAV---NGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp SCEEEEE---TTEEEEECCBCSSSBCCCEEEEET
T ss_pred cCeEEEE---CCEEEEECCcCCCcccccEEEEcC
Confidence 1111222 456888888764 3777877
No 332
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=26.84 E-value=3.1e+02 Score=23.72 Aligned_cols=63 Identities=13% Similarity=0.284 Sum_probs=35.2
Q ss_pred EEEEECCCCCeE--EEeecC------------CCEEEEEecCCCCCCCEEEEEe----CCCcEEEEECCCcccccceeee
Q psy6415 11 LKMFDLKTMSLK--WETNLK------------NGVCGVDFDRRDIPMNKLVATT----LEAKLFVFDLKTLHREKGFAYL 72 (174)
Q Consensus 11 iklWDl~~~~~~--~~~~~~------------~~V~sv~f~~~~~~~~~l~s~s----~Dg~I~iWD~~~~~~~~~~~~~ 72 (174)
|..||.+.+++. +..... ..+.-.+++-++ ...|+.|+ .||++ ||....
T Consensus 294 v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG--~dEIv~Gs~~iD~dG~~-L~st~~---------- 360 (591)
T 2zux_A 294 LVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDG--KDEIIFGSMAVDHDGKG-MYSTGL---------- 360 (591)
T ss_dssp EEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSS--SCEEEETTEEECTTSCE-EEECSC----------
T ss_pred EEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCC--CceEEEeeeEECCCCCE-eeeCCC----------
Confidence 788898887663 322211 234444555554 24566553 55554 665432
Q ss_pred eecccCcCcEEEEEEcCC
Q psy6415 73 SEKAHKATTVWAAKHLPQ 90 (174)
Q Consensus 73 ~~~~h~~~~i~~v~fsP~ 90 (174)
+|.+ .+.-..|.|+
T Consensus 361 ---gHGD-a~hv~dldP~ 374 (591)
T 2zux_A 361 ---GHGD-ALHTGDLDPG 374 (591)
T ss_dssp ---CCCS-CEEEECCCTT
T ss_pred ---CCCC-eeEEeecCCC
Confidence 6666 6766677775
No 333
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=23.29 E-value=2.6e+02 Score=24.03 Aligned_cols=22 Identities=23% Similarity=0.303 Sum_probs=15.4
Q ss_pred ccCcCcEEEEEEcCCCCCEEEE
Q psy6415 76 AHKATTVWAAKHLPQNRDLFVT 97 (174)
Q Consensus 76 ~h~~~~i~~v~fsP~~~~~las 97 (174)
+..+.++..+.|+|++..+|+.
T Consensus 527 ~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 527 GPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCccCcCeeECCCCCEEEEE
Confidence 3333489999999976666654
No 334
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=22.84 E-value=3.8e+02 Score=23.33 Aligned_cols=43 Identities=14% Similarity=0.234 Sum_probs=26.4
Q ss_pred cEEEEECCCCCeEEEee---------cCCCEEEEEecCCCCCCCEEEEEeCCCcE
Q psy6415 10 DLKMFDLKTMSLKWETN---------LKNGVCGVDFDRRDIPMNKLVATTLEAKL 55 (174)
Q Consensus 10 ~iklWDl~~~~~~~~~~---------~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I 55 (174)
.|..|++. ++.++... |-..+...+|+.++ ...|+....||++
T Consensus 156 ~l~aY~ld-G~~LW~idlg~Ni~aGahyt~~~V~DlDGDG--kaEIvv~TadGt~ 207 (620)
T 2zuy_A 156 LIDAYKLD-GTFLWRINLGRNIRAGAHYTQFMVYDLDGDG--KAEIAMKTADGTT 207 (620)
T ss_dssp EEEEECTT-SCEEEEEECCTTSCCSTTSCCCEEECSSSSS--SCEEEEEECTTCB
T ss_pred EEEEEECC-CCEEEEEcCCCCcccccccCceeEEEcCCCC--cceEEEEccCCcc
Confidence 46677775 55444432 22356777888775 3567777777765
Done!