RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy6416
         (193 letters)



>d1dwka1 a.35.1.4 (A:1-86) Cyanase N-terminal domain {Escherichia
           coli [TaxId: 562]}
          Length = 86

 Score = 26.2 bits (58), Expect = 1.1
 Identities = 8/35 (22%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 112 LAQIMGM--YFVSSVLLMRMNMPPEYRSIISKVLG 144
           +A   G+   FV++ LL +  +P +   ++   L 
Sbjct: 32  IADGTGLAEAFVTAALLGQQALPADAARLVGAKLD 66


>d1tjva_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin
           {Domestic duck (Anas platyrhynchos), delta-crystallin
           [TaxId: 8839]}
          Length = 449

 Score = 25.3 bits (54), Expect = 5.1
 Identities = 4/60 (6%), Positives = 15/60 (25%)

Query: 16  SSRYFHWNIVLYCMLFMVIVLIPFYIGSRYFHWNIVLYCMLFMVIVLIPFYIGYFIVTNI 75
                   + +   +   + +    +        +     L++V   +PF   +      
Sbjct: 319 VVDTLTAVLQVATGVISTLQISKENMEKALTPEMLATDLALYLVRKGVPFRQAHTASGKA 378


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.337    0.148    0.451 

Gapped
Lambda     K      H
   0.267   0.0522    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 732,774
Number of extensions: 31767
Number of successful extensions: 184
Number of sequences better than 10.0: 1
Number of HSP's gapped: 178
Number of HSP's successfully gapped: 31
Length of query: 193
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 112
Effective length of database: 1,295,466
Effective search space: 145092192
Effective search space used: 145092192
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 50 (23.5 bits)