BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6420
(169 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q69ZW3|EHBP1_MOUSE EH domain-binding protein 1 OS=Mus musculus GN=Ehbp1 PE=1 SV=3
Length = 1231
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/57 (57%), Positives = 41/57 (71%)
Query: 47 PSKLSIVWTRRSRRVVTEPMLWEPTMTDPLRGVVVWAVPENKTISVTLFKDPRYQTF 103
P KL +VWTRRSRR ++ W+P + +P RGVVVW VPEN I+VTLFKDP + F
Sbjct: 37 PDKLVVVWTRRSRRKSSKAHSWQPGIKNPYRGVVVWPVPENIEITVTLFKDPHAEEF 93
>sp|Q8NDI1|EHBP1_HUMAN EH domain-binding protein 1 OS=Homo sapiens GN=EHBP1 PE=1 SV=3
Length = 1231
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/57 (57%), Positives = 41/57 (71%)
Query: 47 PSKLSIVWTRRSRRVVTEPMLWEPTMTDPLRGVVVWAVPENKTISVTLFKDPRYQTF 103
P KL +VWTRRSRR ++ W+P + +P RGVVVW VPEN I+VTLFKDP + F
Sbjct: 37 PDKLVVVWTRRSRRKSSKAHSWQPGIKNPYRGVVVWPVPENIEITVTLFKDPHAEEF 93
>sp|Q99MS7|EH1L1_MOUSE EH domain-binding protein 1-like protein 1 OS=Mus musculus
GN=Ehbp1l1 PE=2 SV=1
Length = 1716
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 60/96 (62%), Gaps = 8/96 (8%)
Query: 10 WKSHGIRKLAKKSWKSSLHFVKRIHLLKIVFSSHPRTPSKLSIVWTRRSRRVVTEPMLWE 69
WK ++++ K++ K FV H L ++ + P KL +VWTRR+RR+ ++ W+
Sbjct: 5 WKR--LQRVGKRAAK--FQFVACYHEL-VLECTKKWQPDKLVVVWTRRNRRICSKAHSWQ 59
Query: 70 PTMTDPLRGVVVWAVPENKTISVTLFKDP---RYQT 102
P + +P RG VVW VPEN ISVTL++DP +Y+T
Sbjct: 60 PGIQNPYRGTVVWMVPENVDISVTLYRDPHVDQYET 95
>sp|Q8N3D4|EH1L1_HUMAN EH domain-binding protein 1-like protein 1 OS=Homo sapiens
GN=EHBP1L1 PE=1 SV=2
Length = 1523
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Query: 10 WKSHGIRKLAKKSWKSSLHFVKRIHLLKIVFSSHPRTPSKLSIVWTRRSRRVVTEPMLWE 69
WK ++++ K++ K FV H L ++ + P KL +VWTRR+RR+ ++ W+
Sbjct: 5 WKR--LQRVGKRAAK--FQFVACYHEL-VLECTKKWQPDKLVVVWTRRNRRICSKAHSWQ 59
Query: 70 PTMTDPLRGVVVWAVPENKTISVTLFKDPRYQTF 103
P + +P RG VVW VPEN ISVTL++DP +
Sbjct: 60 PGIQNPYRGTVVWMVPENVDISVTLYRDPHVDQY 93
>sp|A6RBX7|NAGS_AJECN Amino-acid acetyltransferase, mitochondrial OS=Ajellomyces
capsulata (strain NAm1 / WU24) GN=ARG2 PE=3 SV=1
Length = 684
Score = 39.7 bits (91), Expect = 0.010, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 41 SSHPRTPSKLSIVWTRRSRRVVTEPMLWE-PTMTDPLRG---------------VVVWAV 84
+S PR PS+LS V TRR R + +L + P+ + L V+ +
Sbjct: 421 ASEPRDPSQLSTVATRRKRNPLIHNLLTDKPSHSASLPAGRLRANNGCSSQNNFQVMHST 480
Query: 85 PENKTISVTLFKDPRYQTFFPPKNGHKR 112
K + +TLF DPR + PP NG R
Sbjct: 481 FVKKGMPLTLFPDPRVHIWKPPINGKSR 508
>sp|P57764|GSDMD_HUMAN Gasdermin-D OS=Homo sapiens GN=GSDMD PE=1 SV=1
Length = 484
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 87 NKTISVTLFKDPRYQTFFPPKNGHKRSHS 115
+ + V LF D + +TF PP GHKRS S
Sbjct: 224 DSDLDVLLFPDKKQRTFQPPATGHKRSTS 252
>sp|O54781|SRPK2_MOUSE SRSF protein kinase 2 OS=Mus musculus GN=Srpk2 PE=1 SV=2
Length = 681
Score = 31.6 bits (70), Expect = 2.7, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 7 WKNWKSHGIRKLAKKSWKSSLHFVK----RIHLLKIVFSSHPRTPSKLSIV 53
W W G R +A K KS+ H+ + I LLK V S P P+K +V
Sbjct: 94 WLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSDPNKDMVV 144
>sp|Q6CLS0|MCA1_KLULA Metacaspase-1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359
/ DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=MCA1
PE=3 SV=2
Length = 433
Score = 31.6 bits (70), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 46/118 (38%), Gaps = 10/118 (8%)
Query: 33 IHLLKIVFSSHPRTPSKLSIVWTRRSRRVVTEPMLWEPTMTDPLRGVVVWAVPENKTISV 92
+ L + S H T L + +T ++ V+ EP +W+ + L+ + +A ++
Sbjct: 269 VRLTALFDSCHSGT--VLDLPYTYSTKGVIKEPNMWKDVGSSGLQAAMAYATGNTTSLVS 326
Query: 93 TLFKDPRYQTFFPPKNGHKRSHSVKIKFK------FSKQLGNHRICSSKENGSMVGEL 144
+L + T N R +IKF FS N + ENG G +
Sbjct: 327 SLGN--VFTTITKSNNNVDRERVKQIKFSPADVIMFSGSKDNQTSADATENGQNTGAM 382
>sp|P78362|SRPK2_HUMAN SRSF protein kinase 2 OS=Homo sapiens GN=SRPK2 PE=1 SV=3
Length = 688
Score = 31.2 bits (69), Expect = 3.0, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 7 WKNWKSHGIRKLAKKSWKSSLHFVK----RIHLLKIVFSSHPRTPSKLSIV 53
W W G R +A K KS+ H+ + I LLK V S P P+K +V
Sbjct: 96 WLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSDPNKDMVV 146
>sp|Q05043|RSF1_YEAST Respiration factor 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RSF1 PE=1 SV=1
Length = 376
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 30 VKRIHLLKIVFSSHPRTPSKLSIVWTRRSRRVVTEPMLW 68
+K HL K++F+ P T + + RR++R+ + M+W
Sbjct: 156 IKGNHLSKLLFAKSPLTINTYCQFYDRRTKRICNQEMIW 194
>sp|A6ZM92|RSF1_YEAS7 Respiration factor 1 OS=Saccharomyces cerevisiae (strain YJM789)
GN=RSF1 PE=3 SV=1
Length = 376
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 30 VKRIHLLKIVFSSHPRTPSKLSIVWTRRSRRVVTEPMLW 68
+K HL K++F+ P T + + RR++R+ + M+W
Sbjct: 156 IKGNHLSKLLFAKSPLTINTYCQFYDRRTKRICNQEMIW 194
>sp|Q9V496|APLP_DROME Apolipophorins OS=Drosophila melanogaster GN=Rfabg PE=1 SV=2
Length = 3351
Score = 30.4 bits (67), Expect = 6.2, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 110 HKRSHSVKIKFKFS-KQLG--NHRICSSKENGSMVGELLANGSFK 151
H +S + K KFS K +G N +I + + NGS+ GEL NG +
Sbjct: 1484 HLKSENTIEKLKFSTKNIGEANDKIIAFEANGSLKGELRGNGEIQ 1528
>sp|Q96SB4|SRPK1_HUMAN SRSF protein kinase 1 OS=Homo sapiens GN=SRPK1 PE=1 SV=2
Length = 655
Score = 30.0 bits (66), Expect = 7.3, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 7 WKNWKSHGIRKLAKKSWKSSLHFVK----RIHLLKIVFSSHPRTPSKLSIV 53
W +W G + +A K KS+ H+ + I LLK V +S P P++ +V
Sbjct: 95 WLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVV 145
>sp|Q5RD27|SRPK1_PONAB SRSF protein kinase 1 OS=Pongo abelii GN=SRPK1 PE=2 SV=2
Length = 655
Score = 30.0 bits (66), Expect = 7.5, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 7 WKNWKSHGIRKLAKKSWKSSLHFVK----RIHLLKIVFSSHPRTPSKLSIV 53
W +W G + +A K KS+ H+ + I LLK V +S P P++ +V
Sbjct: 95 WLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVV 145
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.135 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,931,817
Number of Sequences: 539616
Number of extensions: 2582538
Number of successful extensions: 4463
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 4451
Number of HSP's gapped (non-prelim): 20
length of query: 169
length of database: 191,569,459
effective HSP length: 109
effective length of query: 60
effective length of database: 132,751,315
effective search space: 7965078900
effective search space used: 7965078900
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)