Query psy6422
Match_columns 182
No_of_seqs 134 out of 153
Neff 3.8
Searched_HMMs 46136
Date Fri Aug 16 17:36:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6422.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6422hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2417|consensus 100.0 3.3E-31 7.1E-36 240.2 10.1 107 7-113 345-458 (462)
2 PF12430 ABA_GPCR: Abscisic ac 100.0 4.4E-30 9.5E-35 212.8 11.4 106 5-110 79-196 (196)
3 KOG2417|consensus 99.7 3.4E-19 7.5E-24 162.3 1.4 63 116-180 346-411 (462)
4 PF12430 ABA_GPCR: Abscisic ac 99.5 5.4E-14 1.2E-18 116.9 4.6 65 114-181 80-150 (196)
5 PF12537 DUF3735: Protein of u 95.4 0.0037 8E-08 44.9 -0.3 34 115-148 3-36 (72)
6 PF03034 PSS: Phosphatidyl ser 58.4 23 0.0005 32.0 5.3 65 42-108 75-143 (280)
7 PLN02930 CDP-diacylglycerol-se 48.1 34 0.00074 31.9 4.9 104 2-107 64-208 (353)
8 KOG2735|consensus 31.5 2.1E+02 0.0045 27.8 7.3 105 2-108 118-257 (466)
9 PF03825 Nuc_H_symport: Nucleo 31.4 4E+02 0.0088 24.2 9.5 36 41-76 302-342 (400)
10 KOG0826|consensus 28.7 40 0.00088 31.6 2.1 34 62-95 24-63 (357)
11 PF12271 Chs3p: Chitin synthas 25.4 3.3E+02 0.0071 25.0 7.2 107 10-118 155-284 (293)
No 1
>KOG2417|consensus
Probab=99.97 E-value=3.3e-31 Score=240.17 Aligned_cols=107 Identities=66% Similarity=1.007 Sum_probs=103.3
Q ss_pred cHHHHHHHHHhhh-------hHHHHHHhHhHhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhcCc
Q psy6422 7 THRDLIALFLLEL-------EPLTILQTFFYAISSSKSSNIIVLVLAQIMGMYFVSSVLLMRMNMPPEYRSIISKVLGDL 79 (182)
Q Consensus 7 ~~~~~~~~~~~~~-------~~L~sl~kfF~aisss~ssn~ivLllAqimG~YfISSvLLiRsNLP~e~r~~It~vLG~l 79 (182)
-|+.-|..+|.|. |+|.+++|||+++++++|||+++|+++|+|||||+|++||||+|+|.|||.+|||+|||+
T Consensus 345 fwsQyISf~lVG~i~vtSvRGll~tltkf~y~~~~s~ssn~ivl~l~qimgmyf~ssvllirms~p~Eyr~iit~VlGdl 424 (462)
T KOG2417|consen 345 FWSQYISFFLVGVIAVTSVRGLLITLTKFFYSISSSKSSNIIVLFLAQIMGMYFVSSVLLIRMSMPAEYRTIITEVLGDL 424 (462)
T ss_pred HHHHHHHHHhhheeEEeehhhhhhhhhhhhheecccccccchHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhh
Confidence 4899999999984 999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhhHHHHHHHHHHHhHhHHhheeecCCCc
Q psy6422 80 QFNFYHRWFDVIFLLSALSSIVFLPFSYVHPNIF 113 (182)
Q Consensus 80 ef~f~~~WFD~iFliSal~T~~~l~~~~k~~~~~ 113 (182)
+|||||||||.+|++||+.+++++|+.||.+++|
T Consensus 425 qfnfyhRwfdviFl~Sa~~si~~L~l~~k~~~~~ 458 (462)
T KOG2417|consen 425 QFNFYHRWFDVIFLVSALSSILFLYLHHKSRQSD 458 (462)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 9999999999999999999999999999998754
No 2
>PF12430 ABA_GPCR: Abscisic acid G-protein coupled receptor
Probab=99.97 E-value=4.4e-30 Score=212.85 Aligned_cols=106 Identities=49% Similarity=0.822 Sum_probs=98.8
Q ss_pred cccHHHHHHHHHhhh-------hHHHHHHhHhHhhccCcc--hhHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q psy6422 5 YTTHRDLIALFLLEL-------EPLTILQTFFYAISSSKS--SNIIVLVLAQIMGMYFVSSVLLMRMNMPPEYRSIISKV 75 (182)
Q Consensus 5 ~~~~~~~~~~~~~~~-------~~L~sl~kfF~aisss~s--sn~ivLllAqimG~YfISSvLLiRsNLP~e~r~~It~v 75 (182)
...|.+.|.++|.|. |+|.++.|+|.+.++..+ +|.++|++||+||+||+||++|||+|||+|++.+++++
T Consensus 79 ~~~~s~~ISf~L~g~l~~~S~r~vl~t~~~~~~~~~~~~~~~~~~~~L~laelmGiY~iSt~lLlRsnLP~~~~~~i~~~ 158 (196)
T PF12430_consen 79 VDSWSRQISFLLSGVLFVTSIRGVLTTFSKFFRALPSSLSLSSNILVLFLAELMGIYFISTVLLLRSNLPPEYSSIITEI 158 (196)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 468999999999986 577789999999999876 67999999999999999999999999999999999999
Q ss_pred hc---CcccchhhhhHHHHHHHHHHHhHhHHhheeecC
Q psy6422 76 LG---DLQFNFYHRWFDVIFLLSALSSIVFLPFSYVHP 110 (182)
Q Consensus 76 LG---~lef~f~~~WFD~iFliSal~T~~~l~~~~k~~ 110 (182)
|| ++||+|+|+|||.+|++||++|++++|++||..
T Consensus 159 Lg~~~~~~~~~~~~wFD~iFl~S~~~T~~~i~~~~~~~ 196 (196)
T PF12430_consen 159 LGENSLLEFNFYDRWFDKIFLISAILTAVGIYVAHKHR 196 (196)
T ss_pred HccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99 699999999999999999999999999999863
No 3
>KOG2417|consensus
Probab=99.74 E-value=3.4e-19 Score=162.28 Aligned_cols=63 Identities=63% Similarity=0.873 Sum_probs=59.5
Q ss_pred ceeeceeee--ehhhHHHHH-HHHhhhhhhheeeccCCcchHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy6422 116 WTIEQGISR--IGVIGVTVM-ALLSGFGAFFYAISSSKSSNIIVLVLAQIMGMYFVSSVDILREAAVQ 180 (182)
Q Consensus 116 wtieq~is~--v~~Igv~~~-~~l~~f~k~f~~~ss~~ss~~ivl~laqimgmyfvssvll~r~~~~~ 180 (182)
|+ ||||| ||+|+||++ |.+.+++||||+.+++||||++||+++|||||||+|||||||||.|.
T Consensus 346 ws--QyISf~lVG~i~vtSvRGll~tltkf~y~~~~s~ssn~ivl~l~qimgmyf~ssvllirms~p~ 411 (462)
T KOG2417|consen 346 WS--QYISFFLVGVIAVTSVRGLLITLTKFFYSISSSKSSNIIVLFLAQIMGMYFVSSVLLIRMSMPA 411 (462)
T ss_pred HH--HHHHHHhhheeEEeehhhhhhhhhhhhheecccccccchHHHHHHHHHHHHHHHHHHHhhcChH
Confidence 66 88887 899999987 99999999999999999999999999999999999999999999986
No 4
>PF12430 ABA_GPCR: Abscisic acid G-protein coupled receptor
Probab=99.45 E-value=5.4e-14 Score=116.90 Aligned_cols=65 Identities=42% Similarity=0.645 Sum_probs=55.9
Q ss_pred ccceeeceeeeehhhHHHHHHHHhhh----hhhheeeccCCc--chHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy6422 114 LQWTIEQGISRIGVIGVTVMALLSGF----GAFFYAISSSKS--SNIIVLVLAQIMGMYFVSSVDILREAAVQR 181 (182)
Q Consensus 114 ~~wtieq~is~v~~Igv~~~~~l~~f----~k~f~~~ss~~s--s~~ivl~laqimgmyfvssvll~r~~~~~~ 181 (182)
+.|+ |++|+ .++|++.++++||+ .|++.+.++.++ +|.++|+++|+||+||+|+++|||+|+|+.
T Consensus 80 ~~~s--~~ISf-~L~g~l~~~S~r~vl~t~~~~~~~~~~~~~~~~~~~~L~laelmGiY~iSt~lLlRsnLP~~ 150 (196)
T PF12430_consen 80 DSWS--RQISF-LLSGVLFVTSIRGVLTTFSKFFRALPSSLSLSSNILVLFLAELMGIYFISTVLLLRSNLPPE 150 (196)
T ss_pred HHHH--HHHHH-HHHHHHHHHhHHHHHHHHHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 4566 99998 77777776666655 999999999887 779999999999999999999999999974
No 5
>PF12537 DUF3735: Protein of unknown function (DUF3735); InterPro: IPR022535 This conserved domain is found in a subunit of a voltage dependent anion channel required for acidification and functions of the Golgi apparatus; it may function in counter-ion conductance. It belongs to the Golgi pH regulator (1.A.38 from TC) family
Probab=95.38 E-value=0.0037 Score=44.86 Aligned_cols=34 Identities=56% Similarity=0.741 Sum_probs=30.0
Q ss_pred cceeeceeeeehhhHHHHHHHHhhhhhhheeecc
Q psy6422 115 QWTIEQGISRIGVIGVTVMALLSGFGAFFYAISS 148 (182)
Q Consensus 115 ~wtieq~is~v~~Igv~~~~~l~~f~k~f~~~ss 148 (182)
....||-++++|++||+++|.|+||+.+..++..
T Consensus 3 ~~~~~~~l~ri~ViGVt~mAiLSG~gaVstpy~~ 36 (72)
T PF12537_consen 3 FFYIENVLSRIGVIGVTLMAILSGFGAVSTPYYY 36 (72)
T ss_pred eehHHHHHHHHHHHHHHHHHHHhhhhHHccHHHH
Confidence 3567889999999999999999999988888775
No 6
>PF03034 PSS: Phosphatidyl serine synthase; InterPro: IPR004277 Phosphatidyl serine synthase is also known as serine exchange enzyme (2.7.8 from EC). This family represents eukaryotic PSS I and II, membrane bound proteins that catalyse the replacement of the head group of a phospholipid (phosphotidylcholine or phosphotidylethanolamine) by L-serine.; GO: 0006659 phosphatidylserine biosynthetic process
Probab=58.36 E-value=23 Score=32.01 Aligned_cols=65 Identities=23% Similarity=0.242 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhc----CcccchhhhhHHHHHHHHHHHhHhHHhheee
Q psy6422 42 VLVLAQIMGMYFVSSVLLMRMNMPPEYRSIISKVLG----DLQFNFYHRWFDVIFLLSALSSIVFLPFSYV 108 (182)
Q Consensus 42 vLllAqimG~YfISSvLLiRsNLP~e~r~~It~vLG----~lef~f~~~WFD~iFliSal~T~~~l~~~~k 108 (182)
.-++|+..|-+. -++++|..-=-..-++.=|++. -.-|||.+.|-|.+++=--++..++++++.+
T Consensus 75 ~f~~aH~~GW~~--Kali~Rd~~l~w~~Si~fE~~Elsf~h~LPnF~ECWWD~~iLDvl~CN~~Gi~~Gm~ 143 (280)
T PF03034_consen 75 IFVLAHFLGWFG--KALILRDWWLCWILSIAFELLELSFQHLLPNFNECWWDHWILDVLICNGLGIWLGMK 143 (280)
T ss_pred hhHHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 578899999877 7788999888888888878776 3789999999999998877778888876533
No 7
>PLN02930 CDP-diacylglycerol-serine O-phosphatidyltransferase
Probab=48.14 E-value=34 Score=31.94 Aligned_cols=104 Identities=20% Similarity=0.229 Sum_probs=72.2
Q ss_pred CCCcccHHHHHHHHHhhhhHH-----------HHHHhHh-HhhccC-----------------cchh---H-----HHHH
Q psy6422 2 SPHYTTHRDLIALFLLELEPL-----------TILQTFF-YAISSS-----------------KSSN---I-----IVLV 44 (182)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~L-----------~sl~kfF-~aisss-----------------~ssn---~-----ivLl 44 (182)
-||..-||-.-|+.++=+-+| +++.|++ |..... ..+. . =.-+
T Consensus 64 RPHPa~WR~v~gl~vlYl~~LvFLLFq~~~d~R~~l~~ldp~Lg~~lpE~~Y~~nC~~~tp~~p~~~~~ni~~~~~D~F~ 143 (353)
T PLN02930 64 RPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYTPEHPSSRFKNVYDTLFDEFV 143 (353)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcChhhCCCCcccccccCceecCCCCcchhHHHhhhcccceeh
Confidence 599999999998876544443 3344544 112110 0011 1 2357
Q ss_pred HHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhc----CcccchhhhhHHHHHHHHHHHhHhHHhhee
Q psy6422 45 LAQIMGMYFVSSVLLMRMNMPPEYRSIISKVLG----DLQFNFYHRWFDVIFLLSALSSIVFLPFSY 107 (182)
Q Consensus 45 lAqimG~YfISSvLLiRsNLP~e~r~~It~vLG----~lef~f~~~WFD~iFliSal~T~~~l~~~~ 107 (182)
+|+..|-+. =++++|..-=...-++.-|++. -.-|||.+.|-|.+.+=--++..++++++.
T Consensus 144 ~aH~lGW~~--KaliiRd~~l~w~~SI~FEl~Elsf~H~LPNF~ECWWDhiiLDVL~CN~lGI~lGm 208 (353)
T PLN02930 144 VAHILGWWG--KAIMIRNQPLLWVLSIGFELMELTFRHMLPNFNECWWDSIVLDVLICNWFGIWAGM 208 (353)
T ss_pred HHHHHHHHH--HHHHHhcHHHHHHHHHHHHHHHHHHHHHCCchHHHHhHHHHHHHHHhhHHHHHHHH
Confidence 888888776 5688999888888888888776 389999999999999877777777777653
No 8
>KOG2735|consensus
Probab=31.53 E-value=2.1e+02 Score=27.80 Aligned_cols=105 Identities=20% Similarity=0.217 Sum_probs=76.4
Q ss_pred CCCcccHHHHHHHHHhhhhHHH--------HHHhHhHhhccCcc-----------hh------------HHHHHHHHHHH
Q psy6422 2 SPHYTTHRDLIALFLLELEPLT--------ILQTFFYAISSSKS-----------SN------------IIVLVLAQIMG 50 (182)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~L~--------sl~kfF~aisss~s-----------sn------------~ivLllAqimG 50 (182)
-||-.-||-..|+..+-+-+|. ...+|++++-+..- .| .=....|+..|
T Consensus 118 RPHPa~WR~vfg~SViYll~L~FlLFQ~~~d~r~~l~wldPkl~~~~~l~EkeYg~nC~~~spdri~sh~D~Fa~aHf~G 197 (466)
T KOG2735|consen 118 RPHPALWRIVFGVSVIYLLFLQFLLFQTFDDIRQFLKWLDPKLGGQIELPEKEYGVNCSIYSPDRIWSHLDIFAFAHFLG 197 (466)
T ss_pred CCCchHHHHHHHhHHHHHHHHHHHHHhhhHHHHhHheeeCcccCCCcccchhhhcCccccCCHHHHhhhhhhhHHHHHHH
Confidence 4899999999887765554443 24566666544211 11 13567899999
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhc----CcccchhhhhHHHHHHHHHHHhHhHHhheee
Q psy6422 51 MYFVSSVLLMRMNMPPEYRSIISKVLG----DLQFNFYHRWFDVIFLLSALSSIVFLPFSYV 108 (182)
Q Consensus 51 ~YfISSvLLiRsNLP~e~r~~It~vLG----~lef~f~~~WFD~iFliSal~T~~~l~~~~k 108 (182)
-|. =+||||..----+.++.=|.+. .+-|||-+.|-|.+-+=-=++.-.+||.+-|
T Consensus 198 W~m--KalLIR~~~lcw~iSI~wEltE~~f~hlLPNFaECWWD~iILDVLiCNglGI~~Gmk 257 (466)
T KOG2735|consen 198 WAM--KALLIRHWVLCWVISIMWELTELTFRHLLPNFAECWWDSIILDVLICNGLGIWAGMK 257 (466)
T ss_pred HHH--HHHHHhcchHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHHHHheecccchhhhHhH
Confidence 887 6799998877777887777766 5999999999999988777777888887544
No 9
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=31.41 E-value=4e+02 Score=24.21 Aligned_cols=36 Identities=25% Similarity=0.502 Sum_probs=28.3
Q ss_pred HHHHHHHHH-----HHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy6422 41 IVLVLAQIM-----GMYFVSSVLLMRMNMPPEYRSIISKVL 76 (182)
Q Consensus 41 ivLllAqim-----G~YfISSvLLiRsNLP~e~r~~It~vL 76 (182)
..++++|++ |.+..+++..++.+.|++.|..-..+.
T Consensus 302 ~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~ 342 (400)
T PF03825_consen 302 ALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLY 342 (400)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHH
Confidence 345666666 788999999999999999987655544
No 10
>KOG0826|consensus
Probab=28.65 E-value=40 Score=31.56 Aligned_cols=34 Identities=18% Similarity=0.140 Sum_probs=24.5
Q ss_pred hcCChHHHHHHHHHhc---C---cccchhhhhHHHHHHHH
Q psy6422 62 MNMPPEYRSIISKVLG---D---LQFNFYHRWFDVIFLLS 95 (182)
Q Consensus 62 sNLP~e~r~~It~vLG---~---lef~f~~~WFD~iFliS 95 (182)
-+||...|..++.+++ . .-+-..+||||++|.+-
T Consensus 24 q~L~t~lrpAL~~ll~~~A~~~~~~~~~l~r~fdE~f~~l 63 (357)
T KOG0826|consen 24 QELDTLLRPALQYLLKYFALRPPRYLLRLLRYFDEWFQAL 63 (357)
T ss_pred hhHHHhhHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 4677777777777776 2 23337899999999754
No 11
>PF12271 Chs3p: Chitin synthase III catalytic subunit; InterPro: IPR022057 This family of proteins is found in eukaryotes. Proteins in this family are typically between 288 and 332 amino acids in length. This family is the catalytic domain of chitin synthase III. Chitin is a major component of fungal cell walls and this enzyme is responsible for its formation.
Probab=25.35 E-value=3.3e+02 Score=24.96 Aligned_cols=107 Identities=16% Similarity=0.065 Sum_probs=60.9
Q ss_pred HHHHHHHhhhhHHHHHHhHhHhhccCcchhHHHHH-HHHH-----HHHHHHHHHHHHHhcCChHHHHHH-------HHHh
Q psy6422 10 DLIALFLLELEPLTILQTFFYAISSSKSSNIIVLV-LAQI-----MGMYFVSSVLLMRMNMPPEYRSII-------SKVL 76 (182)
Q Consensus 10 ~~~~~~~~~~~~L~sl~kfF~aisss~ssn~ivLl-lAqi-----mG~YfISSvLLiRsNLP~e~r~~I-------t~vL 76 (182)
|.-++....+.+.+++..++.+.....+.+...|+ +-++ .-+|+++-+++...-|- |.+.-. -.++
T Consensus 155 ~~ss~~~f~~t~~isl~Tf~~w~~~~~~~~~~~Lfvl~~l~p~i~l~~Y~v~q~~lv~~vL~-e~wp~g~i~~~~~fFv~ 233 (293)
T PF12271_consen 155 RGSSLILFIGTFYISLDTFKSWTGYLSPTNTIALFVLYYLLPAIFLVIYVVLQLILVLRVLG-ERWPLGYILLGVFFFVA 233 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHhHHHHHHHHHHHHHH
Confidence 45567777888999999999887744444443433 2222 37888888887776654 322221 1222
Q ss_pred c--------CcccchhhhhHHHHHHHHHHHhH--hHHhheeecCCCccccee
Q psy6422 77 G--------DLQFNFYHRWFDVIFLLSALSSI--VFLPFSYVHPNIFLQWTI 118 (182)
Q Consensus 77 G--------~lef~f~~~WFD~iFliSal~T~--~~l~~~~k~~~~~~~wti 118 (182)
| +.--+-.++..|..|..+-+-.+ ..+|..|..-. +|||+.
T Consensus 234 gQv~~y~~S~~IC~~~~~yiDGlFF~tl~~l~aVmmvyk~WdsIT-edDlef 284 (293)
T PF12271_consen 234 GQVFLYVFSTHICEGSSHYIDGLFFGTLCNLLAVMMVYKFWDSIT-EDDLEF 284 (293)
T ss_pred HHHHHHHhhHHHhccccCeechHHHHHHHHHHHHHHHHHHhhccc-HhhcCC
Confidence 2 22233568899999987654333 33344333322 355653
Done!