BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6425
(68 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4R4T0|RPN1_MACFA Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1 OS=Macaca fascicularis GN=RPN1 PE=2 SV=1
Length = 607
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 4 TQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGNPKNPDN 59
T+ E + YGP+ +VP Y++ +HYENNSPFL +T + R IEVSHWGN +N
Sbjct: 192 TRSEDLLDYGPFRDVPAYSQDTFKVHYENNSPFLTITSMTRVIEVSHWGNIAVEEN 247
>sp|Q5RFB6|RPN1_PONAB Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1 OS=Pongo abelii GN=RPN1 PE=2 SV=1
Length = 607
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 4 TQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGNPKNPDN 59
T+ E + YGP+ +VP Y++ +HYENNSPFL +T + R IEVSHWGN +N
Sbjct: 192 TRSEDLLDYGPFRDVPAYSQDTFKVHYENNSPFLTITSMTRVIEVSHWGNIAVEEN 247
>sp|P04843|RPN1_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1 OS=Homo sapiens GN=RPN1 PE=1 SV=1
Length = 607
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 4 TQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGNPKNPDN 59
T+ E + YGP+ +VP Y++ +HYENNSPFL +T + R IEVSHWGN +N
Sbjct: 192 TRSEDLLDYGPFRDVPAYSQDTFKVHYENNSPFLTITSMTRVIEVSHWGNIAVEEN 247
>sp|Q0DJC5|OST1A_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1A OS=Oryza sativa subsp. japonica GN=OST1A PE=2
SV=1
Length = 615
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 44/63 (69%)
Query: 3 TTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGNPKNPDNDSI 62
T E + YGPYE++PP++ + + +HYENN+PF V ++R+IE+SHWGN + ++ +I
Sbjct: 191 TKLAESELKYGPYEDLPPFSYSPMVVHYENNNPFAVAKEVIREIEISHWGNVQITEHYNI 250
Query: 63 ESG 65
G
Sbjct: 251 AHG 253
>sp|Q9GMB0|RPN1_PIG Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1 OS=Sus scrofa GN=RPN1 PE=1 SV=1
Length = 608
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 4 TQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGNPKNPDN 59
T+ E + YGP+ +VPPY++ +H ENNSPFL +T + R IEVSHWGN +N
Sbjct: 193 TRSEDLLDYGPFRDVPPYSQDTFKVHSENNSPFLTITSMTRVIEVSHWGNIAVEEN 248
>sp|Q91YQ5|RPN1_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1 OS=Mus musculus GN=Rpn1 PE=2 SV=1
Length = 608
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 4 TQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGNPKNPDN 59
++ E + YGP++++P Y++ +HYENNSPFL +T + R IEVSHWGN +N
Sbjct: 193 SRSEDVLDYGPFKDIPAYSQDTFKVHYENNSPFLTITSMTRVIEVSHWGNIAVEEN 248
>sp|P07153|RPN1_RAT Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1 OS=Rattus norvegicus GN=Rpn1 PE=2 SV=1
Length = 605
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 4 TQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGNPKNPDN 59
++ E + YGP++++P Y++ +HYENNSPFL +T + R IEVSHWGN +N
Sbjct: 190 SRSEDILDYGPFKDIPAYSQDTFKVHYENNSPFLTITSMTRVIEVSHWGNIAVEEN 245
>sp|Q9ZUA0|OST1B_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1B OS=Arabidopsis thaliana GN=OST1B PE=2 SV=1
Length = 464
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%)
Query: 2 PTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGNPKNPDNDS 61
P + + I YGPYEN Y+ + IH+ENNSPF VV LVR+IE+SHWG+ + +N
Sbjct: 188 PANRAGKEIKYGPYENRASYSYTPVIIHFENNSPFAVVEELVREIEISHWGSLQITENYR 247
Query: 62 IESGFIR 68
+ G R
Sbjct: 248 LTHGGAR 254
>sp|Q54C27|OST1_DICDI Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1 OS=Dictyostelium discoideum GN=ost1 PE=2 SV=1
Length = 460
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 2 PTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGN 53
PT+ T+TYGPY + ++ + + IHYEN SPF V+T L+++ EVSHWGN
Sbjct: 181 PTSLKGMTVTYGPYSAIEAFSVSPMRIHYENGSPFFVLTNLLKEYEVSHWGN 232
>sp|B9FDT1|OST1B_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1B OS=Oryza sativa subsp. japonica GN=OST1B PE=2
SV=1
Length = 473
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 2 PTTQVEQTITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGNPKNPDNDS 61
PT++ + YG Y N P + I +HYENN PF VV VR++E+SHWGN + +
Sbjct: 197 PTSRAGNEVKYGAYNNQLPNSYVPILVHYENNRPFAVVEEFVRKVEISHWGNVQITEQYK 256
Query: 62 IESG 65
++ G
Sbjct: 257 LKHG 260
>sp|Q9SFX3|OST1A_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1A OS=Arabidopsis thaliana GN=OST1A PE=2 SV=1
Length = 614
Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 10 ITYGPYENVPPYTKANITIHYENNSPFLVVTRLVRQIEVSHWGNPKNPDNDSI 62
+ YGPY+N+ Y+ + I +H+E+ + F V +LVR+IEVSHWGN + +N ++
Sbjct: 197 LKYGPYKNLQSYSYSPIVVHFESKAAFAVAEKLVREIEVSHWGNVQVTENYNV 249
>sp|P41543|OST1_YEAST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=OST1 PE=1 SV=1
Length = 476
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 9 TITYGPYENVPPYTK-ANITIHYENNSPFLVVTRLVRQIEVSHWGN 53
+ +GP+E++P ++ + I Y +N+P V L R I +SHW +
Sbjct: 202 SFEFGPWEDIPRFSSNETLAIVYSHNAPLNQVVNLRRDIWLSHWAS 247
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.133 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,733,646
Number of Sequences: 539616
Number of extensions: 884193
Number of successful extensions: 1450
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1439
Number of HSP's gapped (non-prelim): 12
length of query: 68
length of database: 191,569,459
effective HSP length: 40
effective length of query: 28
effective length of database: 169,984,819
effective search space: 4759574932
effective search space used: 4759574932
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)