Query psy6437
Match_columns 254
No_of_seqs 154 out of 494
Neff 4.9
Searched_HMMs 46136
Date Fri Aug 16 17:54:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6437.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6437hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF13231 PMT_2: Dolichyl-phosp 99.2 6.3E-10 1.4E-14 89.7 16.2 130 41-218 3-132 (159)
2 PF02366 PMT: Dolichyl-phospha 98.8 1.9E-07 4.1E-12 82.6 14.4 140 39-220 61-204 (245)
3 TIGR03663 conserved hypothetic 98.5 4.1E-06 8.8E-11 81.7 16.4 120 42-210 53-172 (439)
4 PRK13279 arnT 4-amino-4-deoxy- 98.3 2.6E-05 5.6E-10 78.4 17.6 132 40-214 62-194 (552)
5 COG1807 ArnT 4-amino-4-deoxy-L 98.1 0.00016 3.4E-09 71.1 16.2 126 38-210 62-187 (535)
6 TIGR03766 conserved hypothetic 97.7 0.001 2.2E-08 65.5 14.7 133 41-218 120-253 (483)
7 PF11028 DUF2723: Protein of u 97.5 0.011 2.5E-07 51.6 16.9 149 34-227 13-178 (178)
8 PF10131 PTPS_related: 6-pyruv 96.9 0.031 6.6E-07 57.2 15.3 98 38-136 2-99 (616)
9 COG5617 Predicted integral mem 96.7 0.043 9.3E-07 57.4 14.2 101 37-138 67-167 (801)
10 PF09852 DUF2079: Predicted me 96.6 0.041 8.9E-07 53.6 13.2 127 39-220 41-167 (449)
11 PF04188 Mannosyl_trans2: Mann 96.1 0.077 1.7E-06 52.1 12.1 68 63-133 116-183 (443)
12 COG1928 PMT1 Dolichyl-phosphat 96.1 0.071 1.5E-06 55.3 12.0 99 37-137 69-185 (699)
13 KOG3359|consensus 95.5 0.49 1.1E-05 49.5 15.3 143 36-218 79-241 (723)
14 COG4745 Predicted membrane-bou 95.1 0.13 2.8E-06 51.5 9.2 128 36-212 56-188 (556)
15 COG4346 Predicted membrane-bou 94.6 0.25 5.4E-06 48.1 9.6 89 40-131 136-224 (438)
16 PF14264 Glucos_trans_II: Gluc 94.4 2.6 5.5E-05 38.7 15.5 127 37-218 26-157 (319)
17 COG5305 Predicted membrane pro 93.9 1.3 2.9E-05 45.1 13.5 101 36-139 93-193 (552)
18 PF09594 DUF2029: Protein of u 92.6 2.4 5.2E-05 36.3 11.5 83 40-131 3-92 (241)
19 TIGR03459 crt_membr carotene b 92.4 5 0.00011 40.3 14.7 148 8-218 114-269 (470)
20 KOG2647|consensus 91.7 0.57 1.2E-05 46.4 7.2 70 62-134 128-197 (444)
21 PF02516 STT3: Oligosaccharyl 91.6 0.58 1.3E-05 45.1 7.1 68 69-137 104-171 (483)
22 COG5542 Predicted integral mem 89.2 0.89 1.9E-05 44.9 6.1 128 39-220 94-223 (420)
23 COG1287 Uncharacterized membra 87.1 8.8 0.00019 40.4 12.2 97 40-137 87-188 (773)
24 PF09913 DUF2142: Predicted me 85.1 34 0.00074 32.2 15.5 85 40-131 95-186 (389)
25 COG3463 Predicted membrane pro 72.0 1.1E+02 0.0024 30.8 13.4 92 37-131 67-158 (458)
26 PF06728 PIG-U: GPI transamida 66.8 81 0.0018 30.4 11.2 73 57-131 78-161 (382)
27 PF11847 DUF3367: Domain of un 64.8 2E+02 0.0042 30.6 15.1 94 38-135 53-148 (680)
28 COG0094 RplE Ribosomal protein 63.3 3.7 8E-05 36.4 1.2 30 225-254 117-146 (180)
29 PRK04219 rpl5p 50S ribosomal p 52.9 9.5 0.00021 33.7 2.0 31 224-254 93-123 (177)
30 PTZ00156 60S ribosomal protein 34.5 17 0.00036 32.1 0.6 29 225-254 90-118 (172)
31 PF04922 DIE2_ALG10: DIE2/ALG1 34.1 4.6E+02 0.0099 25.7 13.7 106 54-214 53-162 (379)
32 PHA01514 O-antigen conversion 30.2 6.1E+02 0.013 25.9 14.1 81 38-125 48-132 (485)
33 PF10724 DUF2516: Protein of u 25.8 3.5E+02 0.0076 21.7 7.0 47 183-229 46-93 (100)
34 KOG2292|consensus 25.1 2.9E+02 0.0064 29.1 7.6 64 72-137 129-193 (751)
35 PF09586 YfhO: Bacterial membr 23.2 8.7E+02 0.019 25.3 13.4 59 40-101 73-133 (843)
36 PLN02841 GPI mannosyltransfera 20.7 8.8E+02 0.019 24.5 12.1 67 63-131 86-152 (440)
No 1
>PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase
Probab=99.24 E-value=6.3e-10 Score=89.73 Aligned_cols=130 Identities=25% Similarity=0.349 Sum_probs=112.0
Q ss_pred chhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhHHHH
Q psy6437 41 RPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCT 120 (254)
Q Consensus 41 RPL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~lLa~ 120 (254)
-|+..+..+.-+.++|.+++..|+.|.+.+.+....+|.+.|++++ +..|.+++++++.-|....-.. ..+.|.+..
T Consensus 3 pPl~~~~~~~~~~l~G~~~~~~~~~~~l~~~~~~~~~y~i~r~~~~-~~~a~~~~l~~~~~p~~~~~~~--~~~~~~~~~ 79 (159)
T PF13231_consen 3 PPLYFLLLALFFKLFGDSVWALRLFNILFSLLTLLLIYLIARRLFG-RRAALIAALLLALSPMFIFYSA--SARPDMLLL 79 (159)
T ss_pred ChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-chHHHHHHHHHHHhHHHHHHHH--HHhHHHHHH
Confidence 4888888899999999999999999999999999999999999988 5689999999999997765544 577799999
Q ss_pred HHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCCccchhHHHHHHHHHHHHHHHhh
Q psy6437 121 LFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAAMIS 200 (254)
Q Consensus 121 lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla~~~~~lAlLS 200 (254)
+|.+++++.+.++.++++ +.+..++.++..+++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~l~~~l~~~~ 114 (159)
T PF13231_consen 80 FFFLLALYAFYRYIKSKK---------------------------------------------WRWWILAGLLLGLAFLT 114 (159)
T ss_pred HHHHHHHHHHHHHHhhcc---------------------------------------------hHHHHHHHHHHHHHHHH
Confidence 999999999999987542 12446788889999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy6437 201 KETGVTVLLICICIELLH 218 (254)
Q Consensus 201 KE~aI~lp~~~~l~d~~~ 218 (254)
|++++.+++.++++.++.
T Consensus 115 k~~~~~~~~~~~~~l~~~ 132 (159)
T PF13231_consen 115 KYTFLLLIPALLLYLLLS 132 (159)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999998877766555
No 2
>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Dolichyl-phosphate-mannose-protein mannosyltransferase proteins 2.4.1.109 from EC belong to the glycosyltransferase family 39 (GT39 from CAZY) and are responsible for O-linked glycosylation of proteins. They catalyse the reaction: Dolichyl phosphate D-mannose + protein -> dolichyl phosphate + O-D-mannosyl-protein. The transfer of mannose to seryl and threonyl residues of secretory proteins is catalyzed by a family of protein mannosyltransferases in Saccharomyces cerevisiae coded for by seven genes (PMT1-7). Protein O-glycosylation is essential for cell wall rigidity and cell integrity and this protein modification is vital for S. cerevisiae [].; GO: 0000030 mannosyltransferase activity, 0006493 protein O-linked glycosylation, 0016020 membrane
Probab=98.78 E-value=1.9e-07 Score=82.63 Aligned_cols=140 Identities=19% Similarity=0.300 Sum_probs=109.7
Q ss_pred ccchhHhHHhHHHHHhcC-CCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhH
Q psy6437 39 SYRPLTVLTFRLNYLACG-LKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADL 117 (254)
Q Consensus 39 ~yRPL~~lsf~l~~~l~G-~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~l 117 (254)
.|.|.....-...++.+| .+.+..++.|.+.=++...++|.+.|++.+++..|++++++++..|....--. ....|.
T Consensus 61 ~~p~~~~~~~~~~~~~~~~~~~~~~R~~~~l~~~~~~~l~y~~~~~~~~s~~~al~aa~l~~~~~~~~~~sr--~~~~D~ 138 (245)
T PF02366_consen 61 GYPPLYYWISAIGFYYFGSVNYWAARLPSALFGALTVPLVYLILRRLFGSRRAALLAALLLALDPSLIVQSR--YALLDS 138 (245)
T ss_pred cccchhhHHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHhhHHHHHHH--HHhhHH
Confidence 467777776677777888 89999999999999999999999999999988999999999999998764422 366789
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCCccchhHHHHHHHHHHHHHH
Q psy6437 118 LCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAA 197 (254)
Q Consensus 118 La~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla~~~~~lA 197 (254)
...+|.+++++++.++.+.+.. +.+.+.|.+++.++..+|
T Consensus 139 ~l~~f~~la~~~~~~~~~~~~~----------------------------------------~~~~~~~~~l~gi~lGla 178 (245)
T PF02366_consen 139 ILLFFILLAIYCLLRWYRYQPF----------------------------------------RRKWWLWLLLAGIALGLA 178 (245)
T ss_pred HHHHHHHHHHHHHHHHHhcccc----------------------------------------ccccHHHHHHHHHHHHHH
Confidence 9999999999999999622111 123456788899999999
Q ss_pred HhhHHHHHHHH---HHHHHHHHHhhc
Q psy6437 198 MISKETGVTVL---LICICIELLHNK 220 (254)
Q Consensus 198 lLSKE~aI~lp---~~~~l~d~~~~~ 220 (254)
+++|.+++.+. +++.+++++..+
T Consensus 179 ~~~K~~~~~~~~~~~~~~~~~l~~~~ 204 (245)
T PF02366_consen 179 ILTKGPGLLLVLPAGLLFLWLLWRKR 204 (245)
T ss_pred HHhchhHHHHHHHHHHHHHHHHHHHh
Confidence 99999988543 233345555433
No 3
>TIGR03663 conserved hypothetical protein TIGR03663. Members of this protein family, uncommon and rather sporadically distributed, are found almost always in the same genomes as members of family TIGR03662, and frequently as a nearby gene. Members show some N-terminal sequence similarity with Pfam family pfam02366, dolichyl-phosphate-mannose-protein mannosyltransferase. The few invariant residues in this family, found toward the N-terminus, include a dipeptide DE, a tripeptide HGP, and two different Arg residues. Up to three members may be found in a genome. The function is unknown.
Probab=98.52 E-value=4.1e-06 Score=81.74 Aligned_cols=120 Identities=18% Similarity=0.228 Sum_probs=98.4
Q ss_pred hhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhHHHHH
Q psy6437 42 PLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTL 121 (254)
Q Consensus 42 PL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~lLa~l 121 (254)
|+....-++-+.+||.+-+..++...+.-++ ..+++.+.++.++++ .++++|++.+..|...- ..-..|.|.+..+
T Consensus 53 Pll~wl~A~~~~lFG~se~a~RL~~aL~g~~-v~l~~~~~r~~~~~~-~al~AAllla~sp~~~~--~sr~~~~D~~l~~ 128 (439)
T TIGR03663 53 PFLYHITAAVFHLFGISDATARLLPAVFGVL-LPLTAWLYRKRLGDN-EVLWAAVLLAFSPVMVY--YSRFMRNDIFVAF 128 (439)
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH-HHHHHHHHHHHcCcH-HHHHHHHHHHHhHHHHH--HHHHHhHHHHHHH
Confidence 7766666778999999999999999999944 677888888887654 89999999999999853 2345889999999
Q ss_pred HHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCCccchhHHHHHHHHHHHHHHHhhH
Q psy6437 122 FYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAAMISK 201 (254)
Q Consensus 122 F~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla~~~~~lAlLSK 201 (254)
|.++++++++++.++++ ..|.+++.+++.+|+++|
T Consensus 129 f~~lal~~l~r~~~~~~---------------------------------------------~~~~~lag~~~gLa~ltK 163 (439)
T TIGR03663 129 FTLLAVGAAFRYLDTGK---------------------------------------------RRYLFLAASALALAFTSK 163 (439)
T ss_pred HHHHHHHHHHHHHHcCC---------------------------------------------hHHHHHHHHHHHHHHHHH
Confidence 99999999999875431 247788889999999999
Q ss_pred HHHHHHHHH
Q psy6437 202 ETGVTVLLI 210 (254)
Q Consensus 202 E~aI~lp~~ 210 (254)
+++..+++.
T Consensus 164 g~~~l~~~~ 172 (439)
T TIGR03663 164 ENAYLIILI 172 (439)
T ss_pred HHHHHHHHH
Confidence 998876644
No 4
>PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional
Probab=98.35 E-value=2.6e-05 Score=78.43 Aligned_cols=132 Identities=15% Similarity=0.122 Sum_probs=98.0
Q ss_pred cchhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhHHH
Q psy6437 40 YRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLC 119 (254)
Q Consensus 40 yRPL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~lLa 119 (254)
.-|+..-.-++-+.+||.+.++.++.|.+...+..+++|.+.+++.+++..|++++++++.-|.-... +- ....|.+.
T Consensus 62 KPPL~yWl~Als~~LFG~~~~a~RLpsaL~~~lt~llvy~larrl~~~r~~AllAaLIlls~~~v~~~-g~-~a~~D~~l 139 (552)
T PRK13279 62 KPIAGYWINSIGQWLFGDNNFGVRFGSVFSTLLSALLVYWLALRLWRDRRTALLAALIYLSLFLVYGI-GT-YAVLDPMI 139 (552)
T ss_pred CCcHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHH-HH-HHhhhHHH
Confidence 45777777778899999999999999999999999999999999998877899999998877653321 11 24668888
Q ss_pred HHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCCccchhHHHHHHHHHHHHHHHh
Q psy6437 120 TLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAAMI 199 (254)
Q Consensus 120 ~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla~~~~~lAlL 199 (254)
++|..++++++....+.++++ +++.++++..+++.+|+|
T Consensus 140 ~~fi~lal~~f~~~~~~~~~~-----------------------------------------~~~~~~lllGla~Glg~L 178 (552)
T PRK13279 140 TLWLTAAMCSFWLALQAQTRR-----------------------------------------GKIGGYLLLGLACGMGFM 178 (552)
T ss_pred HHHHHHHHHHHHHHHHccccc-----------------------------------------chHHHHHHHHHHHHHHHH
Confidence 999999987776665543211 122334444566789999
Q ss_pred hHH-HHHHHHHHHHHH
Q psy6437 200 SKE-TGVTVLLICICI 214 (254)
Q Consensus 200 SKE-~aI~lp~~~~l~ 214 (254)
+|= .++.+|+++++.
T Consensus 179 TKG~ial~lP~l~il~ 194 (552)
T PRK13279 179 TKGFLALAVPVISVLP 194 (552)
T ss_pred hcchHHHHHHHHHHHH
Confidence 997 456677655443
No 5
>COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]
Probab=98.07 E-value=0.00016 Score=71.07 Aligned_cols=126 Identities=21% Similarity=0.236 Sum_probs=102.0
Q ss_pred CccchhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhH
Q psy6437 38 GSYRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADL 117 (254)
Q Consensus 38 ~~yRPL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~l 117 (254)
...-|+..-.-++-+.+||.+.+.-++.+.+.+.+.++++|.+.++++++ ..|++++++.+.-|.-.-.- -..--|.
T Consensus 62 ~~kPPl~~Wl~a~~~~lfG~~~~~~rl~~~l~~~~~~~l~y~l~k~l~~~-~~a~~aali~~~~p~~~~~~--~~~~~D~ 138 (535)
T COG1807 62 FEKPPLVYWLQALSYLLFGVNEWSARLPSALAGALTALLVYWLAKRLFGR-LAALLAALILLLTPLFFLIG--RLALLDA 138 (535)
T ss_pred cCCCcHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHh--HHHhhhH
Confidence 44667888777889999999999999999999999999999999999998 68999999999988754221 1234577
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCCccchhHHHHHHHHHHHHHH
Q psy6437 118 LCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAA 197 (254)
Q Consensus 118 La~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla~~~~~lA 197 (254)
..++|..++++++.++.+.+++ . .|.++..+...+|
T Consensus 139 ~l~~f~~la~~~~~~~~~~~~~------------------------------------------~--~~~l~~gl~lGL~ 174 (535)
T COG1807 139 ALAFFLTLALALLYLALRARGK------------------------------------------L--KWLLLLGLALGLG 174 (535)
T ss_pred HHHHHHHHHHHHHHHHHHhcCc------------------------------------------c--cHHHHHHHHHHHH
Confidence 8899999999999988775311 1 2456677888999
Q ss_pred HhhHHHHHHHHHH
Q psy6437 198 MISKETGVTVLLI 210 (254)
Q Consensus 198 lLSKE~aI~lp~~ 210 (254)
+++|=.++.+++.
T Consensus 175 ~ltKg~~~~~l~~ 187 (535)
T COG1807 175 FLTKGPGALLLPL 187 (535)
T ss_pred HHHhchHHHHHHH
Confidence 9999999888884
No 6
>TIGR03766 conserved hypothetical integral membrane protein. Models TIGR03110, TIGR03111, and TIGR03112 describe a three-gene system found in several Gram-positive bacteria, where TIGR03110 is distantly related to a putative transpeptidase, exosortase (TIGR02602). This model describes a small clade that correlates by both gene clustering and phyletic pattern, although imperfectly, to the three gene system. Both this narrow clade, and the larger set of full-length homologous integral membrane proteins, have an especially well-conserved region near the C-terminus with an invariant tyrosine. The function is unknown.
Probab=97.70 E-value=0.001 Score=65.52 Aligned_cols=133 Identities=14% Similarity=0.181 Sum_probs=99.8
Q ss_pred chhHhHHhHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhHHH
Q psy6437 41 RPLTVLTFRLNYLACGLKPRS-FHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLC 119 (254)
Q Consensus 41 RPL~~lsf~l~~~l~G~~p~~-fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~lLa 119 (254)
-|+..+ .+.-+.++|.+.+. +++.|+++..+...++|.+.+++++++ .|.++++++++-|..+--+. +-=.|..+
T Consensus 120 ~g~~l~-~~~l~kifg~~~~~~~~llNil~~~~si~liy~i~k~lf~~~-~a~~a~~l~~l~~~~~~y~~--~~Ysd~~~ 195 (483)
T TIGR03766 120 LFLLLF-MHFLYKLFGETSWLFFDVVNIVLVDLSALILYKAVKKVFNKK-KAFVALYLFVLLLALSPYIL--IPYTDTWV 195 (483)
T ss_pred HHHHHH-HHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHHHHHHH--HHHhhhHH
Confidence 344433 34457889984444 499999999999999999999999875 67888888888887554332 45568888
Q ss_pred HHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCCccchhHHHHHHHHHHHHHHHh
Q psy6437 120 TLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAAMI 199 (254)
Q Consensus 120 ~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla~~~~~lAlL 199 (254)
.+|..+++++|....+++.. +.++...+++.++..+|.+
T Consensus 196 l~~~~l~l~~~~~~~~~~~~-----------------------------------------~~~~~~~Il~gillal~~~ 234 (483)
T TIGR03766 196 LPFVSLFLFLYTVISKKTDL-----------------------------------------RKKIALSILLGVLLAIAYF 234 (483)
T ss_pred HHHHHHHHHHHHHHHhcccH-----------------------------------------HHHHHHHHHHHHHHHHHHH
Confidence 88888898888777553211 1335566778888999999
Q ss_pred hHHHHHHHHHHHHHHHHHh
Q psy6437 200 SKETGVTVLLICICIELLH 218 (254)
Q Consensus 200 SKE~aI~lp~~~~l~d~~~ 218 (254)
.|++++++...++++.++.
T Consensus 235 iKp~~iI~liA~~i~~~l~ 253 (483)
T TIGR03766 235 IKPSAIIFVIAIFIVLFLQ 253 (483)
T ss_pred hcccchHHHHHHHHHHHHH
Confidence 9999999988888777764
No 7
>PF11028 DUF2723: Protein of unknown function (DUF2723); InterPro: IPR021280 This family is conserved in bacteria. The function is not known.
Probab=97.50 E-value=0.011 Score=51.62 Aligned_cols=149 Identities=17% Similarity=0.172 Sum_probs=97.7
Q ss_pred CCCCCccchhHhHHhHHHHHhcC-CCCchHH--HHHHHHHHHHHHHHHHHHHHhccc-------------chHHHHHHHH
Q psy6437 34 PNSHGSYRPLTVLTFRLNYLACG-LKPRSFH--LINNLLHSAITYLVYILSSYVLPN-------------RRARLFASLI 97 (254)
Q Consensus 34 ~~~~~~yRPL~~lsf~l~~~l~G-~~p~~fH--lvNlllH~l~~~Lv~~l~~~l~~~-------------~~~A~laAlL 97 (254)
+..|+..-|+-++.-++ ..++. ...-++. +.+.+.=++...++|+...++.++ ...++++|+.
T Consensus 13 gV~HPPGyPlf~llg~l-f~~lp~~~~ia~~vNl~Sal~sA~tv~~l~~~~~~l~~~~~~~~~~~~~~~~~~a~lv~al~ 91 (178)
T PF11028_consen 13 GVPHPPGYPLFTLLGRL-FSLLPDFGNIAWRVNLLSALSSALTVLFLFWSITRLLRKLPEEPSTAQTIAILGAGLVGALA 91 (178)
T ss_pred CCCCCCCcHHHHHHHHH-HHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHH
Confidence 35689999999888887 67776 3344444 355556666677888888888776 4678889999
Q ss_pred HHHhhhc-ccchhhHHHHhhHHHHHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCC
Q psy6437 98 FAVHPIH-TEAVSGIVGRADLLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDS 176 (254)
Q Consensus 98 FavHPih-tEaV~~Iv~R~~lLa~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (254)
|+.-|.- .+||. .--.-+..+|..+.+++.+++.+..++.
T Consensus 92 fafS~sfW~~Av~---aEVYal~~l~~al~~~l~l~w~~~~~~~------------------------------------ 132 (178)
T PF11028_consen 92 FAFSDSFWFQAVE---AEVYALSSLFTALLLWLLLKWEREADEP------------------------------------ 132 (178)
T ss_pred HHhhHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhhcccc------------------------------------
Confidence 9987632 23322 2235677889888999999987653210
Q ss_pred CCccchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhcccccccc
Q psy6437 177 SHTKKDTICAVMRRTALAGAAMISKETGVTVLLICICIELLHNKVCTHLKN 227 (254)
Q Consensus 177 ~~~~~~~~~~~lla~~~~~lAlLSKE~aI~lp~~~~l~d~~~~~~~~~~~~ 227 (254)
++-+|.++...++.+|+--.-+.+...+.+.++-++.++.....||
T Consensus 133 -----~~~r~l~l~afl~GLs~g~H~~~ll~lP~~~~~~~~~~~~~~~~~~ 178 (178)
T PF11028_consen 133 -----RSDRWLLLIAFLCGLSLGVHLLNLLALPAIALLYFFKRYKKITWKN 178 (178)
T ss_pred -----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccC
Confidence 1123667777778888866666655555555555555555555554
No 8
>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein. Its function has not yet been established, though it shows similarity to 6-pyruvoyl-tetrahydropterin synthase.
Probab=96.91 E-value=0.031 Score=57.16 Aligned_cols=98 Identities=19% Similarity=0.196 Sum_probs=81.5
Q ss_pred CccchhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhH
Q psy6437 38 GSYRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADL 117 (254)
Q Consensus 38 ~~yRPL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~l 117 (254)
.+|-|++....++=..+.|....+|.++-.+.-.+.++.+|.+.|++.+ +..|+++|++|..-|-|....-|=..-.+.
T Consensus 2 ~FYpPL~yyl~a~l~~l~g~~~~Ay~l~~~L~~~l~~~~~Y~~~R~~~~-~~~A~l~aiLyl~~py~l~~~y~rgni~e~ 80 (616)
T PF10131_consen 2 RFYPPLPYYLGALLSLLFGNPIVAYKLFIFLAFFLGGLGMYFLGRRLGR-RKAAILAAILYLFSPYHLRNIYWRGNIPET 80 (616)
T ss_pred eeCCcHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHhHHHHHHHHhcchHHHH
Confidence 3578999988888888888888899998888888888899999999888 889999999999999998887777778888
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q psy6437 118 LCTLFYLSTILIYIKWIKL 136 (254)
Q Consensus 118 La~lF~Llal~~yl~~~~~ 136 (254)
++..+.-+-++...+..++
T Consensus 81 lA~~llPlvll~~~~~~~~ 99 (616)
T PF10131_consen 81 LAFALLPLVLLFLYRFIKK 99 (616)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 8877777777666655543
No 9
>COG5617 Predicted integral membrane protein [Function unknown]
Probab=96.65 E-value=0.043 Score=57.41 Aligned_cols=101 Identities=13% Similarity=0.060 Sum_probs=84.0
Q ss_pred CCccchhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhh
Q psy6437 37 HGSYRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRAD 116 (254)
Q Consensus 37 ~~~yRPL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~ 116 (254)
-.+|-|++.+..++--.+-|.....|.+.-.+.- +.++++|.+.|..-+....|+++|+||..-|-|-+..-|=-.-..
T Consensus 67 lrYypPl~Yli~aal~~l~~d~~~t~~v~~~la~-llG~~~~~~~r~~g~t~~ia~I~alL~ltsp~~l~vlf~EGniP~ 145 (801)
T COG5617 67 LRYYPPLSYLIGAALNFLLGDVVTTYAVFLMLAF-LLGAGGWLLWRLRGRTGFIALISALLWLTSPENLKVLFIEGNIPR 145 (801)
T ss_pred ceecCcHHHHHHHHHHHhhcChhHHHHHHHHHHH-HHHHHHHHHHHhhccccchHHHHHHHHHhChhheEEEEecCcccH
Confidence 4679999999998888888944455555554444 999999999999888888999999999999999988776666677
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC
Q psy6437 117 LLCTLFYLSTILIYIKWIKLGG 138 (254)
Q Consensus 117 lLa~lF~Llal~~yl~~~~~~~ 138 (254)
+++.-|..+++.++.+..+++.
T Consensus 146 v~~i~f~pl~l~~l~~~~~~Gk 167 (801)
T COG5617 146 VLAIGFGPLALGLLERFLERGK 167 (801)
T ss_pred HHHHHHHHHHHHHHHHHHHhCc
Confidence 8889999999999999987653
No 10
>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry contains a family of various integral membrane proteins with no known function.
Probab=96.61 E-value=0.041 Score=53.58 Aligned_cols=127 Identities=17% Similarity=0.083 Sum_probs=91.4
Q ss_pred ccchhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhHH
Q psy6437 39 SYRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLL 118 (254)
Q Consensus 39 ~yRPL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~lL 118 (254)
.+-|+-.+- ..-|++|+ +|...=++..++=++.+..+|++.|+...+++.|++.++++++.|.-..++. --=+.+.+
T Consensus 41 HfsPil~ll-~Ply~l~P-s~~tLli~Qal~la~~~~pl~~lar~~~~~~~~a~~~~~~ylL~p~~~~~~~-~dFH~~~~ 117 (449)
T PF09852_consen 41 HFSPILYLL-APLYRLFP-SPLTLLIVQALLLALGAIPLYRLARRRLLSRRLALLIALAYLLSPGLQGANL-FDFHPVAF 117 (449)
T ss_pred cchHHHHHH-HHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhHHHHhhhh-CCCcHHHH
Confidence 355665543 34688887 8899999999999999999999999998677899999999999998887754 22255666
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCCccchhHHHHHHHHHHHHHHH
Q psy6437 119 CTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAAM 198 (254)
Q Consensus 119 a~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla~~~~~lAl 198 (254)
+.-+.+.+++++.+.+ | ....++.++.+
T Consensus 118 avPll~~~~~~~~~~r-------------------------------------------------~---~~~~~~~ll~l 145 (449)
T PF09852_consen 118 AVPLLLWALYALERRR-------------------------------------------------W---RLFILWALLLL 145 (449)
T ss_pred HHHHHHHHHHHHHhCc-------------------------------------------------H---HHHHHHHHHHH
Confidence 6555566666442210 1 12456677889
Q ss_pred hhHHHHHHHHHHHHHHHHHhhc
Q psy6437 199 ISKETGVTVLLICICIELLHNK 220 (254)
Q Consensus 199 LSKE~aI~lp~~~~l~d~~~~~ 220 (254)
++||..-...+.+.++-++.+|
T Consensus 146 lvKEd~~l~v~~~gl~~~~~~r 167 (449)
T PF09852_consen 146 LVKEDLGLTVAGIGLYLLLRRR 167 (449)
T ss_pred HHHhhHHHHHHHHHHHHHHhCc
Confidence 9999887777776666666653
No 11
>PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI [], [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=96.13 E-value=0.077 Score=52.05 Aligned_cols=68 Identities=19% Similarity=0.274 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhHHHHHHHHHHHHHHHHH
Q psy6437 63 HLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYLSTILIYIKW 133 (254)
Q Consensus 63 HlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~lLa~lF~Llal~~yl~~ 133 (254)
.++|.++|.+.+..+|.+.+..++++..|..++++|++-|..+ --.+.=.|.+.+++.+.+++.+.+.
T Consensus 116 ~~vs~~~~~la~~~L~~l~~~~~~~~~~a~~a~ll~~~~Pasi---F~sa~YsEslf~~lsf~gl~~~~~~ 183 (443)
T PF04188_consen 116 ILVSNVAFLLAAVALYRLTRRVFKSRKLALLAALLFIFSPASI---FLSAPYSESLFALLSFAGLYLLERG 183 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHccHHH---HhhcCccHHHHHHHHHHHHHHHHhc
Confidence 4678899999999999999999888889999999999999864 2234667888888888888877443
No 12
>COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.08 E-value=0.071 Score=55.34 Aligned_cols=99 Identities=18% Similarity=0.197 Sum_probs=76.2
Q ss_pred CCccchhHhHHhHHHHHhcC------------------CCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Q psy6437 37 HGSYRPLTVLTFRLNYLACG------------------LKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIF 98 (254)
Q Consensus 37 ~~~yRPL~~lsf~l~~~l~G------------------~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLF 98 (254)
++..-|+.-.-+++.-.+.| .++.+++.+|.++-.+...++|..+|+...++.++.++++++
T Consensus 69 fDvHPPL~kml~al~~~L~g~~g~f~f~~~g~~~~~~~~~y~~mR~f~A~lgsl~vpl~y~t~r~~~~s~l~~~l~~llv 148 (699)
T COG1928 69 FDVHPPLGKMLIALVGGLEGYDPPFDFQLIGLTEYPFGYNYVGMRFFNALLGSLTVPLVYLIARRIGYSRLVAALAGLLV 148 (699)
T ss_pred cccCCcHHHHHHHhhhhhhccCCCcccccCCcccccCCCChHHHHHHHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 44466777776666666654 456899999999999999999999999999989999999999
Q ss_pred HHhhhcccchhhHHHHhhHHHHHHHHHHHHHHHHHHHhc
Q psy6437 99 AVHPIHTEAVSGIVGRADLLCTLFYLSTILIYIKWIKLG 137 (254)
Q Consensus 99 avHPihtEaV~~Iv~R~~lLa~lF~Llal~~yl~~~~~~ 137 (254)
+..-.++---..| --|.+..+|..++.+++++.-+.+
T Consensus 149 ~~dn~~~t~sR~I--LLDs~LlfF~~~~~y~~~r~~~~~ 185 (699)
T COG1928 149 AFDNSFVTESRFI--LLDSFLLFFIVAAAYCFLRFHRQQ 185 (699)
T ss_pred HhccchhhhhHHH--HHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9877665432222 135556788899999999886543
No 13
>KOG3359|consensus
Probab=95.51 E-value=0.49 Score=49.48 Aligned_cols=143 Identities=16% Similarity=0.119 Sum_probs=107.2
Q ss_pred CCCccchhHhHHhHHHHHhcCCCC-----------------chHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Q psy6437 36 SHGSYRPLTVLTFRLNYLACGLKP-----------------RSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIF 98 (254)
Q Consensus 36 ~~~~yRPL~~lsf~l~~~l~G~~p-----------------~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLF 98 (254)
-.+..-|+.-.-+++--.+.|.|. .+++..|.++-++..-++|...+.+-..+++|.++|+++
T Consensus 79 f~DvHPPlgKmL~al~g~L~GydG~f~f~~~g~~~~~~~~y~~mR~f~a~lgsl~vp~~y~t~~~~~~s~~aa~l~allv 158 (723)
T KOG3359|consen 79 FFDVHPPLGKMLIALVGYLAGYDGSFDFQSIGEYYPNGVPYVGMRLFSALLGSLTVPLAYLTLKELGFSRLAAALAALLV 158 (723)
T ss_pred eeccCchHHHHHHHHHHHHhCCCCCccccCCCccCCCCCchHhHHHHHHHHHhHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 345568999999998888877432 578999999999999999999999988888999999999
Q ss_pred HHhhhcccchhhHHHHhhHHHHHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCC
Q psy6437 99 AVHPIHTEAVSGIVGRADLLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSH 178 (254)
Q Consensus 99 avHPihtEaV~~Iv~R~~lLa~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (254)
+.---++.--..|. -|.+-.+|..+++++++|.--... .|
T Consensus 159 ~~dns~~T~sr~IL--LDs~Llff~~~~~y~~~r~~~~~~--------------------------------------~p 198 (723)
T KOG3359|consen 159 LFDNSLVTLSRFIL--LDSMLLFFMAAAVYCFVRFYTQRK--------------------------------------RP 198 (723)
T ss_pred hhcccchhhhhHHH--HhHHHHHHHHHHHHHHHHHHHhhc--------------------------------------CC
Confidence 88655543322221 366678899999999998861111 01
Q ss_pred ccchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHH---HHHHHh
Q psy6437 179 TKKDTICAVMRRTALAGAAMISKETGVTVLLICI---CIELLH 218 (254)
Q Consensus 179 ~~~~~~~~~lla~~~~~lAlLSKE~aI~lp~~~~---l~d~~~ 218 (254)
...+-|.|+.++.++..||+=+|=.|+...+.+. +.|+|.
T Consensus 199 fs~~W~~wL~~tGvsLgcaiSvK~vGlft~~~Vgl~~v~~LW~ 241 (723)
T KOG3359|consen 199 FSLRWWKWLLLTGVSLGCAISVKYVGLFTIALVGLYTVRELWC 241 (723)
T ss_pred CcchHHHHHHHHHHHhhheeehhhhhHHHHHHHHHHHHHHHHH
Confidence 1234567888899999999999999987766655 445554
No 14
>COG4745 Predicted membrane-bound mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.10 E-value=0.13 Score=51.53 Aligned_cols=128 Identities=17% Similarity=0.225 Sum_probs=87.0
Q ss_pred CCCccchhHh--HHhHHHHHhcC---CCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhh
Q psy6437 36 SHGSYRPLTV--LTFRLNYLACG---LKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSG 110 (254)
Q Consensus 36 ~~~~yRPL~~--lsf~l~~~l~G---~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~ 110 (254)
+.-+|||.-- +-+..|+.+|| -+-.--+++-.+.-.+..+. -++.|.-++.. -.+..+.+-+..|+-+.=--
T Consensus 56 Gaw~YrPi~HGPfL~hvn~avF~~lGasDataRlvvAv~G~llpL~-awL~R~rL~d~-evlal~~LLA~sPvlVYYSR- 132 (556)
T COG4745 56 GAWSYRPIYHGPFLYHVNYAVFGLLGASDATARLVVAVTGVLLPLT-AWLYRTRLGDK-EVLALATLLAFSPVLVYYSR- 132 (556)
T ss_pred CcceecccccCchhhhhhhhhhhhcccchhhhhhhHHHhhhHHHHH-HHHHHHhccch-HHHHHHHHHhcChhhhhHHH-
Confidence 4567999865 77788888775 35556666555444444433 44444444432 35556667788887653211
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCCccchhHHHHHHH
Q psy6437 111 IVGRADLLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRR 190 (254)
Q Consensus 111 Iv~R~~lLa~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla 190 (254)
--|+|++-++|.++++....|+..+.. .+.+-++
T Consensus 133 -FmR~Dl~la~ftl~aVg~~vR~lDt~R---------------------------------------------~~yL~~s 166 (556)
T COG4745 133 -FMRNDLLLAAFTLLAVGFAVRYLDTER---------------------------------------------FRYLYAS 166 (556)
T ss_pred -HHhhhHHHHHHHHHHHHHHHHHhhccc---------------------------------------------ccchhhh
Confidence 269999999999999999999976541 1234456
Q ss_pred HHHHHHHHhhHHHHHHHHHHHH
Q psy6437 191 TALAGAAMISKETGVTVLLICI 212 (254)
Q Consensus 191 ~~~~~lAlLSKE~aI~lp~~~~ 212 (254)
...+.+|+-.||++.+.++...
T Consensus 167 A~~lalAftaKEnall~~~~f~ 188 (556)
T COG4745 167 AVSLALAFTAKENALLYVAAFL 188 (556)
T ss_pred hhhhhhhhhhcccceeHHHHHh
Confidence 6777899999999999998877
No 15
>COG4346 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=94.63 E-value=0.25 Score=48.11 Aligned_cols=89 Identities=21% Similarity=0.269 Sum_probs=71.5
Q ss_pred cchhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhHHH
Q psy6437 40 YRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLC 119 (254)
Q Consensus 40 yRPL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~lLa 119 (254)
.-||.---.++.-.+. +.|..+++=+++.|.+.-+++|+..++..++..+++.+|++-|..|.--.. ..++--|+--
T Consensus 136 HPpLgKyIiAl~ml~~-d~Pl~WRiPsiIe~~liliiv~~~~~ki~~~~la~~~aA~~~alDp~l~am--g~VAMLDIhv 212 (438)
T COG4346 136 HPPLGKYIIALGMLIV-DKPLYWRIPSIIEGALILIIVYFVAYKIARSPLAGLIAALLAALDPLLRAM--GGVAMLDIHV 212 (438)
T ss_pred CCcHHHHHHHHHHHHh-cCCceeeccHHHhhhHHHHHHHHHHHHHhcCchHHHHHHHHHhhCcHHHHh--cchhHHHHHH
Confidence 3577777777766665 899999999999999999999999999999877888899999999975422 3455668888
Q ss_pred HHHHHHHHHHHH
Q psy6437 120 TLFYLSTILIYI 131 (254)
Q Consensus 120 ~lF~Llal~~yl 131 (254)
++|..+.+++..
T Consensus 213 aFFtaL~~~fl~ 224 (438)
T COG4346 213 AFFTALFMYFLA 224 (438)
T ss_pred HHHHHHHHHHHh
Confidence 999887776653
No 16
>PF14264 Glucos_trans_II: Glucosyl transferase GtrII
Probab=94.41 E-value=2.6 Score=38.66 Aligned_cols=127 Identities=20% Similarity=0.229 Sum_probs=71.0
Q ss_pred CCccchhHhHHhHHHHHhcCCC----CchHHHHHHHHHHHHHHHHHHHHHHhcc-cchHHHHHHHHHHHhhhcccchhhH
Q psy6437 37 HGSYRPLTVLTFRLNYLACGLK----PRSFHLINNLLHSAITYLVYILSSYVLP-NRRARLFASLIFAVHPIHTEAVSGI 111 (254)
Q Consensus 37 ~~~yRPL~~lsf~l~~~l~G~~----p~~fHlvNlllH~l~~~Lv~~l~~~l~~-~~~~A~laAlLFavHPihtEaV~~I 111 (254)
..+.||+..+...+- +|.. |+.-.+..+++=++.+. .+.+.+.. +...+.+.++++...|...|.-.+.
T Consensus 26 ~~~GR~~~~~~~~~l---~~~~~~~~~pl~~iLs~~~la~s~~---~~~~~~~~~~~~~~~l~~~~~~~~P~~~~~lsy~ 99 (319)
T PF14264_consen 26 ISSGRPLLDLLMKLL---FGTGNYDLPPLPQILSILFLALSAV---LLVRLFDIKSSFISVLFSLLFISSPFFLENLSYR 99 (319)
T ss_pred hhcCchHHHHHHHHH---hccCCCchhHHHHHHHHHHHHHHHH---HHHHHhCccchHHHHHHHHHHHHhHHHHHHHHHH
Confidence 356999999887665 3322 33333333333333333 33333332 3466888999999999999987754
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCCccchhHHHHHHHH
Q psy6437 112 VGRADLLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRT 191 (254)
Q Consensus 112 v~R~~lLa~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla~ 191 (254)
-+-.+...+++ +..+-.+. ..+ +.+ +.+.+.
T Consensus 100 ~~s~~~~ls~~-l~~la~~~-~~k----------------------------------------------~~~-~~~~~~ 130 (319)
T PF14264_consen 100 FDSLPMALSLL-LAVLAFYF-LKK----------------------------------------------SKI-GFLISI 130 (319)
T ss_pred HccHHHHHHHH-HHHHHHHH-Hhh----------------------------------------------hhH-HHHHHH
Confidence 43322222222 22222222 111 112 556677
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHh
Q psy6437 192 ALAGAAMISKETGVTVLLICICIELLH 218 (254)
Q Consensus 192 ~~~~lAlLSKE~aI~lp~~~~l~d~~~ 218 (254)
++.++++-.-+..+.+-..+.+.+.+.
T Consensus 131 ~ll~~sl~~YQa~~~v~i~l~~~~~l~ 157 (319)
T PF14264_consen 131 LLLVLSLGIYQASINVFISLVLIILLL 157 (319)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777888888888877766666555543
No 17
>COG5305 Predicted membrane protein [Function unknown]
Probab=93.88 E-value=1.3 Score=45.15 Aligned_cols=101 Identities=20% Similarity=0.180 Sum_probs=86.4
Q ss_pred CCCccchhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHh
Q psy6437 36 SHGSYRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRA 115 (254)
Q Consensus 36 ~~~~yRPL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~ 115 (254)
++...-|+-.+.-..-+++||..-..-+-.+.++=+++..++|.+.|.+++.+ .+++++.++|+.|.|+-. -...|+
T Consensus 93 ~~~~~~PLYfll~h~W~~lF~~s~~~~Rsls~L~~~~ai~~~y~l~r~l~~~~-~a~la~~~~AisP~~i~~--~qe~R~ 169 (552)
T COG5305 93 ELLVHPPLYFLLAHFWMALFGNSLLASRSLSALLSALAIPLVYWLGRELFGST-TALLAAALMAISPFHIFY--SQEARS 169 (552)
T ss_pred ccCCCCCeeehHHHHHHHHhchHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHccChHHHHH--HHHHHH
Confidence 34456677777778888999988888899999999999999999999999886 566999999999999865 347899
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCC
Q psy6437 116 DLLCTLFYLSTILIYIKWIKLGGR 139 (254)
Q Consensus 116 ~lLa~lF~Llal~~yl~~~~~~~~ 139 (254)
..++..+.+++..+-+++.+.+..
T Consensus 170 y~L~~~~~lis~~~Ll~ai~~~~~ 193 (552)
T COG5305 170 YALAVATTLISATLLLRAIRLPTS 193 (552)
T ss_pred HHHHHHHHHHHHHHHHHHccCccc
Confidence 999999999999999999876643
No 18
>PF09594 DUF2029: Protein of unknown function (DUF2029); InterPro: IPR018584 This is a putative transmembrane protein from prokaryotes. It is likely to be conserved between Mycobacterium species []. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=92.60 E-value=2.4 Score=36.33 Aligned_cols=83 Identities=25% Similarity=0.245 Sum_probs=47.0
Q ss_pred cchhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHH----HHHhccc---chHHHHHHHHHHHhhhcccchhhHH
Q psy6437 40 YRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYIL----SSYVLPN---RRARLFASLIFAVHPIHTEAVSGIV 112 (254)
Q Consensus 40 yRPL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l----~~~l~~~---~~~A~laAlLFavHPihtEaV~~Iv 112 (254)
|-|+..+-+..-..+ + +...-.++..++...+... .|+..++ ........++.+.-|+..+.. .
T Consensus 3 YpP~~~~l~~p~~~l-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~ 73 (241)
T PF09594_consen 3 YPPLFALLFAPLALL-P-----FPVAFLLWALLSLAALALAVRLLLRRLGRRKPPGRALLLALLLLAFPPVLSALG---L 73 (241)
T ss_pred CcHHHHHHHHHHHHc-C-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCcCcchhHHHHHHHHHHHHHHHHHHHH---h
Confidence 556666555544322 2 3344444444444433333 3333322 123344556778888843333 4
Q ss_pred HHhhHHHHHHHHHHHHHHH
Q psy6437 113 GRADLLCTLFYLSTILIYI 131 (254)
Q Consensus 113 ~R~~lLa~lF~Llal~~yl 131 (254)
++.|++..++.+++++.+.
T Consensus 74 gq~~~l~~~l~~~a~~~~~ 92 (241)
T PF09594_consen 74 GQFDLLVAALLLLALLALR 92 (241)
T ss_pred ccHHHHHHHHHHHHHHHHH
Confidence 8999999999999988874
No 19
>TIGR03459 crt_membr carotene biosynthesis associated membrane protein. This model represents a family of hydrophobic and presumed membrane proteins. The genes encoding these proteins are syntenically associated with (found proximal to) genes of carotene biosynthesis ususally including phytoene synthase (crtB), phytoene dehydrogenase (crtI) and geranylgeranyl pyrophosphate synthase (ispA).
Probab=92.35 E-value=5 Score=40.31 Aligned_cols=148 Identities=17% Similarity=0.145 Sum_probs=96.1
Q ss_pred cCcCCCCCCCcccccc---ccCCCCCcCCCCCCCccchhHhHHhHHHHHhcCCCCch----HHHHHHHHHHHHHHHHHHH
Q psy6437 8 TNPDVQLKTPVGDLFN---NDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRS----FHLINNLLHSAITYLVYIL 80 (254)
Q Consensus 8 ~Np~I~~~~~l~~if~---~Dfwg~~l~~~~~~~~yRPL~~lsf~l~~~l~G~~p~~----fHlvNlllH~l~~~Lv~~l 80 (254)
-||+.......++-+. +..|.+ ....|-|+...-+..--.+.|.|+.. ++++.++=-.+..+.+-++
T Consensus 114 ~dPY~~gP~~~~~~~~~~v~~~W~~------t~aPYGPl~l~i~~~v~~l~g~~i~~~v~~~Rl~~l~g~~l~~w~~~rL 187 (470)
T TIGR03459 114 FDPYTVGAAANPGPLLDEVSPDWRN------TTTPYGPLHLLVGQAITTVTGDNVTAGTLAFKLLSLPGLAVMVWAVPKL 187 (470)
T ss_pred CCccccCCccCCchHhhhcCchhcc------CCCCCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4777775433333222 124543 34679999999999999999988754 6666665555555555555
Q ss_pred HHHhcccchHHHHHHHHHHHhhhcc-cchhhHHHHhhHHHHHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccc
Q psy6437 81 SSYVLPNRRARLFASLIFAVHPIHT-EAVSGIVGRADLLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYC 159 (254)
Q Consensus 81 ~~~l~~~~~~A~laAlLFavHPiht-EaV~~Iv~R~~lLa~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~ 159 (254)
.|+.-.++..| .-+.+.+|+-. |-|. ..+.|.++..|.+++++.-.|.+
T Consensus 188 ar~~g~~~~~A---lWL~~~NPLviihlvg--g~HnealM~gl~l~gl~~~~r~~------------------------- 237 (470)
T TIGR03459 188 ATHLGGNPTVA---LWLGVLNPLVVIHLIG--GMHNEMLMVGLVSAGILLALKRR------------------------- 237 (470)
T ss_pred HHHcCCCHHHH---HHHHHcCchhhhhhhc--chhHHHHHHHHHHHHHHHHHhcc-------------------------
Confidence 55554333222 23356788755 5555 35788899999999988775421
Q ss_pred cccccccccccccCCCCCCccchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHh
Q psy6437 160 HQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAAMISKETGVTVLLICICIELLH 218 (254)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla~~~~~lAlLSKE~aI~lp~~~~l~d~~~ 218 (254)
+ ..+.++..+|...|-++++..+.+..+-.-.
T Consensus 238 ------------------------~---~~g~vli~~a~~VK~~a~l~Lpf~~~~~~~~ 269 (470)
T TIGR03459 238 ------------------------P---VAGIALIAVAVALKATAGIALPFVVWIWVAH 269 (470)
T ss_pred ------------------------c---HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 1 2367788899999999999887766554433
No 20
>KOG2647|consensus
Probab=91.73 E-value=0.57 Score=46.37 Aligned_cols=70 Identities=23% Similarity=0.333 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhHHHHHHHHHHHHHHHHHH
Q psy6437 62 FHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYLSTILIYIKWI 134 (254)
Q Consensus 62 fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~lLa~lF~Llal~~yl~~~ 134 (254)
.-++|+.+|++++.++|.+.+..++.+..++-++++|...|... -.-++-.|.|-++|.+.+++...+.+
T Consensus 128 ~~~vn~~~f~la~~~Lyql~~~~~~~~k~s~~a~liFcfnPAsI---F~ts~YSEsLfa~~s~~Gi~~~~~~~ 197 (444)
T KOG2647|consen 128 AVLVNIFFFMLAAVALYQLTRIILHDPKISFYAALLFCFNPASI---FLTAGYSESLFALFSFLGILFLEKGR 197 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChhHHhhhhheeEecchHh---hhhHHhhHHHHHHHHHHHHHHHhcCC
Confidence 34589999999999999999999999889999999999999765 33357889999999999998876553
No 21
>PF02516 STT3: Oligosaccharyl transferase STT3 subunit; InterPro: IPR003674 N-linked glycosylation is a ubiquitous protein modification, and is essential for viability in eukaryotic cells. A lipid-linked core-oligosaccharide is assembled at the membrane of the endoplasmic reticulum and transferred to selected asparagine residues of nascent polypeptide chains by the oligosaccharyl transferase (OTase) complex []. This family consists of the oligsacharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosccharyl transferase (OTase) complex of proteins and is required for its activity [].; GO: 0004576 oligosaccharyl transferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 3AAG_B 2ZAI_D 2ZAG_A 3RCE_A.
Probab=91.59 E-value=0.58 Score=45.08 Aligned_cols=68 Identities=22% Similarity=0.256 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhHHHHHHHHHHHHHHHHHHHhc
Q psy6437 69 LHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYLSTILIYIKWIKLG 137 (254)
Q Consensus 69 lH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~lLa~lF~Llal~~yl~~~~~~ 137 (254)
+-.+.+..+|.+.|++.+ +..++++|++.++.|.+.+=-.-=--..|.+..+|.++++++++++.+++
T Consensus 104 l~~L~vi~~y~~~~~~~~-~~~Gl~aA~l~a~~p~~l~RT~~G~~D~~~~~~~f~~l~~~~~~~a~~~~ 171 (483)
T PF02516_consen 104 LGALTVIPVYLLGRRLGG-RKAGLLAAFLLAISPGYLSRTMAGFYDHHMLELFFPLLIIYFFLLALKSA 171 (483)
T ss_dssp HGGGGHHHHHHHHHHTT--HHHHHHHHHHHTTSHHHHHTSSTT--SGGGGTTHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHhCC-CchHHHHHHHHHHhHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHhcc
Confidence 444556678888866544 56899999999999987643221122678888999999999999888765
No 22
>COG5542 Predicted integral membrane protein [Function unknown]
Probab=89.17 E-value=0.89 Score=44.87 Aligned_cols=128 Identities=18% Similarity=0.255 Sum_probs=86.8
Q ss_pred ccchhHhHHhHHHHHh-cCC-CCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhh
Q psy6437 39 SYRPLTVLTFRLNYLA-CGL-KPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRAD 116 (254)
Q Consensus 39 ~yRPL~~lsf~l~~~l-~G~-~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~ 116 (254)
.|-|+....-++.-.+ .++ .-..-.+.|..-|...+..+|.+.+...+....|-.+..++-.-|.-.-.+ -+-|+.|
T Consensus 94 ~~~p~~~y~i~ii~~L~~~~~~~l~~~l~s~~~~~~~ay~lY~~tk~~y~~~~~a~fa~i~~~~~P~~i~~s-~iw~~te 172 (420)
T COG5542 94 DYFPLYLYWIRIINKLLSSLYFILAIKLFSNIADFVAAYFLYKITKLRYGLGSMARFATILVILSPSVIYNS-AIWGQTE 172 (420)
T ss_pred ccCchHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhhheEEEEEeccHHHhhh-hHHhccc
Confidence 4556655555554444 341 123345678888999999999999998887556666666776677654322 2346889
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCCccchhHHHHHHHHHHHHH
Q psy6437 117 LLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGA 196 (254)
Q Consensus 117 lLa~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla~~~~~l 196 (254)
.+-+++..++++.+..- + + .-+.+++.+
T Consensus 173 Slf~ll~~l~iyf~~~k---~---------------------------------------------~----~~a~~~faL 200 (420)
T COG5542 173 SLFTLLSILAIYFFSIK---K---------------------------------------------Q----IPALFFFAL 200 (420)
T ss_pred hHHHHHHHHHHHHHHcc---c---------------------------------------------h----hHHHHHHHH
Confidence 99999999999988321 1 1 226789999
Q ss_pred HHhhHHHHHHHHHHHHHHHHHhhc
Q psy6437 197 AMISKETGVTVLLICICIELLHNK 220 (254)
Q Consensus 197 AlLSKE~aI~lp~~~~l~d~~~~~ 220 (254)
|.+.|.||+.+-+.+ +++++-+|
T Consensus 201 a~l~Rsngi~~~p~f-l~~~ik~~ 223 (420)
T COG5542 201 ATLFRSNGIFLSPLF-LIPLIKNR 223 (420)
T ss_pred HHHhccchhHHHHHH-HHHHHhhh
Confidence 999999999876544 45555444
No 23
>COG1287 Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only]
Probab=87.06 E-value=8.8 Score=40.42 Aligned_cols=97 Identities=21% Similarity=0.272 Sum_probs=65.6
Q ss_pred cchhHhHHhHHHHHhcC-CCCc----hHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHH
Q psy6437 40 YRPLTVLTFRLNYLACG-LKPR----SFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGR 114 (254)
Q Consensus 40 yRPL~~lsf~l~~~l~G-~~p~----~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R 114 (254)
|-|+-...-..-+..+| ..|. .+-..=.++-.+..+.+|++.|++.+.+ .++++|++.++-|-+..--.-=..|
T Consensus 87 ~~pl~~~l~~~~~~~~~~~~~~~~~~~~~~~PailG~L~vI~vYl~~r~i~~~~-~g~~aa~ll~~~p~~~~rt~~G~~d 165 (773)
T COG1287 87 FPPLFLYLTAALGLILGSIFPVSLETAALLFPAILGVLTVIPVYLLGRRILGDK-TGLLAALLLALAPGYLSRTVAGFYD 165 (773)
T ss_pred CCchHHHHHHHHHHHHHccCchHHHHHHHHhhHHHhhHHHHHHHHHHHHHhcch-hhHHHHHHHHHhhHHHHHhhcCccC
Confidence 56665544444444433 3441 1222334455677778899999998875 7888888888888876554333578
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhc
Q psy6437 115 ADLLCTLFYLSTILIYIKWIKLG 137 (254)
Q Consensus 115 ~~lLa~lF~Llal~~yl~~~~~~ 137 (254)
.|..-.+|.+++++.+..+.+..
T Consensus 166 ~~~~~~~~~~~~l~~~~~aL~~~ 188 (773)
T COG1287 166 TDMFELLLPLFALFFFLLALKAA 188 (773)
T ss_pred CCchHHHHHHHHHHHHHHHHHHh
Confidence 88888888888888888887754
No 24
>PF09913 DUF2142: Predicted membrane protein (DUF2142); InterPro: IPR018674 This family of conserved hypothetical proteins has no known function.
Probab=85.06 E-value=34 Score=32.18 Aligned_cols=85 Identities=21% Similarity=0.276 Sum_probs=48.6
Q ss_pred cchhHhHHhHHHHH---hcCCCCc----hHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHH
Q psy6437 40 YRPLTVLTFRLNYL---ACGLKPR----SFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIV 112 (254)
Q Consensus 40 yRPL~~lsf~l~~~---l~G~~p~----~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv 112 (254)
|-|+..+--++-.. ++|.++. .-++.|+++.++...+.....+ +.++ .+++.++-|....-.+.++
T Consensus 95 y~p~~Ylp~alGi~ig~ll~l~~~~~~~l~Rl~nll~~~~l~~~Ai~~~p---~~k~----l~~~i~l~Pm~~~~~aS~s 167 (389)
T PF09913_consen 95 YPPLYYLPQALGIWIGRLLGLSVLVMYYLGRLFNLLLYALLVYLAIKLAP---RGKW----LLALIALLPMTLFQAASVS 167 (389)
T ss_pred CCcHhhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc---hhHH----HHHHHHHHHHHHHHHHhcC
Confidence 78887776666333 4566653 4566788777665554443332 2222 2556667788776666565
Q ss_pred HHhhHHHHHHHHHHHHHHH
Q psy6437 113 GRADLLCTLFYLSTILIYI 131 (254)
Q Consensus 113 ~R~~lLa~lF~Llal~~yl 131 (254)
.=.-..+..+.+.++++..
T Consensus 168 ~D~~~~~~~~l~~a~~l~~ 186 (389)
T PF09913_consen 168 YDGLIIALAFLFIALLLRL 186 (389)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 5444445555555555444
No 25
>COG3463 Predicted membrane protein [Function unknown]
Probab=72.01 E-value=1.1e+02 Score=30.82 Aligned_cols=92 Identities=15% Similarity=0.292 Sum_probs=68.8
Q ss_pred CCccchhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhh
Q psy6437 37 HGSYRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRAD 116 (254)
Q Consensus 37 ~~~yRPL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~ 116 (254)
+..++|.-.+-+= -|+++. +|..-=+.--+.-++.++..|.++++.+.....|++.+.++...|. .|.+.|-==+..
T Consensus 67 ~vhfqpilfLlyP-~Y~l~P-sp~~Lll~Q~i~ials~~p~y~lA~eil~~E~~al~isilYll~p~-i~gi~~FDFH~m 143 (458)
T COG3463 67 GVHFQPILFLLYP-FYKLFP-SPETLLLIQAIAIALSSLPIYLLAKEILNGEKEALAISILYLLNPY-IEGINLFDFHPM 143 (458)
T ss_pred eeehhhHHHHHHH-HHHhCC-cHHHHHHHHHHHHHHhHHHHHHHHHHHhcccHHHHHHHHHHHhchh-ccCchhhhcchH
Confidence 3458888777776 466655 5555555555666777889999999988766799999999999995 567777666677
Q ss_pred HHHHHHHHHHHHHHH
Q psy6437 117 LLCTLFYLSTILIYI 131 (254)
Q Consensus 117 lLa~lF~Llal~~yl 131 (254)
.++-.+.+++.+.+.
T Consensus 144 ~~avp~~~~a~~f~~ 158 (458)
T COG3463 144 AFAVPLFLLAYYFLK 158 (458)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777778888877763
No 26
>PF06728 PIG-U: GPI transamidase subunit PIG-U; InterPro: IPR009600 Many eukaryotic proteins are anchored to the cell surface via glycosylphosphatidylinositol (GPI), which is posttranslationally attached to the C terminus by GPI transamidase. The mammalian GPI transamidase is a complex of at least four subunits, GPI8, GAA1, PIG-S, and PIG-T. PIG-U is thought to represent a fifth subunit in this complex and may be involved in the recognition of either the GPI attachment signal or the lipid portion of GPI [].; GO: 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=66.77 E-value=81 Score=30.42 Aligned_cols=73 Identities=15% Similarity=0.275 Sum_probs=56.2
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHhccc-----------chHHHHHHHHHHHhhhcccchhhHHHHhhHHHHHHHHH
Q psy6437 57 LKPRSFHLINNLLHSAITYLVYILSSYVLPN-----------RRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYLS 125 (254)
Q Consensus 57 ~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~-----------~~~A~laAlLFavHPihtEaV~~Iv~R~~lLa~lF~Ll 125 (254)
.++....++=.+.-++.+.+++...+..-+. ...+.+.++++..+|+-.- +-+++-.+....++.+.
T Consensus 78 ~~~~~~~llf~~~Dl~~A~~L~~i~~~~~~~~~~~~~~~~~~~~~~~lv~~~YLfNP~tIl--scva~ST~~f~nl~i~~ 155 (382)
T PF06728_consen 78 NSPILISLLFILVDLLIAWLLYRIAKSYQKQESKRQKSPNEKSSSPWLVAAFYLFNPLTIL--SCVALSTTVFTNLFILL 155 (382)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCchhcccchHHHHHHHHHCHHHHH--HHHhcccHHHHHHHHHH
Confidence 4677788888888889999998887654421 1578899999999999884 45667777888888888
Q ss_pred HHHHHH
Q psy6437 126 TILIYI 131 (254)
Q Consensus 126 al~~yl 131 (254)
+++.-.
T Consensus 156 sl~~a~ 161 (382)
T PF06728_consen 156 SLYFAV 161 (382)
T ss_pred HHHHHH
Confidence 877765
No 27
>PF11847 DUF3367: Domain of unknown function (DUF3367); InterPro: IPR021798 This domain is functionally uncharacterised. This domain is found in bacteria and archaea. This presumed domain is typically between 667 to 694 amino acids in length.
Probab=64.80 E-value=2e+02 Score=30.61 Aligned_cols=94 Identities=17% Similarity=0.160 Sum_probs=64.2
Q ss_pred CccchhHhHHhHHHHHhcCCCCchH-HHHHHHHHHHHHHHHHHHHHHh-cccchHHHHHHHHHHHhhhcccchhhHHHHh
Q psy6437 38 GSYRPLTVLTFRLNYLACGLKPRSF-HLINNLLHSAITYLVYILSSYV-LPNRRARLFASLIFAVHPIHTEAVSGIVGRA 115 (254)
Q Consensus 38 ~~yRPL~~lsf~l~~~l~G~~p~~f-HlvNlllH~l~~~Lv~~l~~~l-~~~~~~A~laAlLFavHPihtEaV~~Iv~R~ 115 (254)
++.=|. -.|.+--.+.|+-+|.. ++-=-++-++..+-++++.+++ .+.....+++|+.|++.|--.+.+..|+.
T Consensus 53 GYLFP~--G~Ff~l~~~lglP~Wi~QRLWwallL~vaf~G~~rLa~~L~igs~~~r~~Aa~~YaLsPr~Lttlg~iSs-- 128 (680)
T PF11847_consen 53 GYLFPM--GPFFALGDLLGLPDWITQRLWWALLLTVAFWGALRLARALGIGSPASRVLAAVAYALSPRVLTTLGAISS-- 128 (680)
T ss_pred eeeccc--hHHHHHhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhChHHHHHHHHHHH--
Confidence 344444 45555555667777766 4444445555556777788887 44556789999999999999999888775
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q psy6437 116 DLLCTLFYLSTILIYIKWIK 135 (254)
Q Consensus 116 ~lLa~lF~Llal~~yl~~~~ 135 (254)
|.+..++.=.-++-.++..+
T Consensus 129 e~lP~al~PWvLlPlv~~~r 148 (680)
T PF11847_consen 129 ETLPMALAPWVLLPLVRALR 148 (680)
T ss_pred HHHHHHHhhHHHHHHHHhhc
Confidence 66766666666677777654
No 28
>COG0094 RplE Ribosomal protein L5 [Translation, ribosomal structure and biogenesis]
Probab=63.26 E-value=3.7 Score=36.36 Aligned_cols=30 Identities=30% Similarity=0.592 Sum_probs=27.6
Q ss_pred ccccccCCCchhhhhhhhhhhccccccCCC
Q psy6437 225 LKNSSSNGKSDYFLSLRKHIITEKIEYDVN 254 (254)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (254)
++.+|++|.-+|-+++++|++=..|+||++
T Consensus 117 ls~~sFDg~GN~sfGI~E~i~FPei~yD~~ 146 (180)
T COG0094 117 LSPKSFDGRGNYSFGIKEQIIFPEIDYDPI 146 (180)
T ss_pred CCccccCCCCceEecchheeecCccccCcc
Confidence 677889999999999999999999999984
No 29
>PRK04219 rpl5p 50S ribosomal protein L5P; Reviewed
Probab=52.87 E-value=9.5 Score=33.67 Aligned_cols=31 Identities=26% Similarity=0.371 Sum_probs=27.9
Q ss_pred cccccccCCCchhhhhhhhhhhccccccCCC
Q psy6437 224 HLKNSSSNGKSDYFLSLRKHIITEKIEYDVN 254 (254)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (254)
-++.++.||..+|-+++++|++=+.|+||+.
T Consensus 93 ~l~~~sfD~~GN~sfGI~e~~~fpei~yd~~ 123 (177)
T PRK04219 93 RLKASSFDETGNVSFGIEEHIDFPGVKYDPE 123 (177)
T ss_pred CCCCcccCCCceEeeCchhhhccCccccCcc
Confidence 4778888998899999999999999999984
No 30
>PTZ00156 60S ribosomal protein L11; Provisional
Probab=34.53 E-value=17 Score=32.08 Aligned_cols=29 Identities=24% Similarity=0.438 Sum_probs=26.3
Q ss_pred ccccccCCCchhhhhhhhhhhccccccCCC
Q psy6437 225 LKNSSSNGKSDYFLSLRKHIITEKIEYDVN 254 (254)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (254)
++.+++||.-+|=+++++|++= .|+||+.
T Consensus 90 l~~~sFD~~GN~sfGI~e~i~f-ei~yD~~ 118 (172)
T PTZ00156 90 LKKRNFSDTGNFGFGIQEHIDL-GIKYDPS 118 (172)
T ss_pred ccCcccCCCcccccCCchheee-ceecCcc
Confidence 7788899988999999999999 9999973
No 31
>PF04922 DIE2_ALG10: DIE2/ALG10 family; InterPro: IPR007006 Members of this entry are glycosyltransferases, belonging to the ALG10 family. The majority of the members are annotated as alpha-1,2 glucosyltransferas. The ALG10 protein from Saccharomyces cerevisiae (Baker's yeast) encodes the alpha-1,2 glucosyltransferase of the endoplasmic reticulum. This protein has been characterised in Rat as potassium channel regulator 1 [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane
Probab=34.07 E-value=4.6e+02 Score=25.66 Aligned_cols=106 Identities=17% Similarity=0.222 Sum_probs=69.9
Q ss_pred hcCCCCch-HHHHHHHHHH-HHHHHHHHHHHHhccc-chHHHHHHHHHHHhhhccc-chhhHHHHhhHHHHHHHHHHHHH
Q psy6437 54 ACGLKPRS-FHLINNLLHS-AITYLVYILSSYVLPN-RRARLFASLIFAVHPIHTE-AVSGIVGRADLLCTLFYLSTILI 129 (254)
Q Consensus 54 l~G~~p~~-fHlvNlllH~-l~~~Lv~~l~~~l~~~-~~~A~laAlLFavHPihtE-aV~~Iv~R~~lLa~lF~Llal~~ 129 (254)
+.|-++.. .+.+|++.-. ....+++...+..-++ ..-+...|+.-+.-|++-- +- --=.|+.++++.+++.+.
T Consensus 53 ~~~~~~~~~LR~~N~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~ialfPllfFFsf---LYYTDv~St~~VL~~yl~ 129 (379)
T PF04922_consen 53 FFGCSSLSVLRSTNLLFALVVLPWLIYRILRFLNPRRSRKAILSALNIALFPLLFFFSF---LYYTDVWSTTFVLLMYLA 129 (379)
T ss_pred hhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhHHHHhhH---HHHhcHHHHHHHHHHHHH
Confidence 44656665 9999998766 4455555555443322 2456677777788887652 22 245689999998877743
Q ss_pred HHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCCccchhHHHHHHHHHHHHHHHhhHHHHHHHHH
Q psy6437 130 YIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAAMISKETGVTVLL 209 (254)
Q Consensus 130 yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla~~~~~lAlLSKE~aI~lp~ 209 (254)
..+. +.+ .+.++.++|++...|-|+..+
T Consensus 130 ~~~~------------------------------------------------~~~----~sal~g~~sv~fRQTNIvWv~ 157 (379)
T PF04922_consen 130 SLKR------------------------------------------------RHW----LSALFGLLSVLFRQTNIVWVA 157 (379)
T ss_pred HHcC------------------------------------------------Cch----HHHHHHHHHHHHhcchHHHHH
Confidence 3211 111 166778899999999999999
Q ss_pred HHHHH
Q psy6437 210 ICICI 214 (254)
Q Consensus 210 ~~~l~ 214 (254)
++.+.
T Consensus 158 f~~~~ 162 (379)
T PF04922_consen 158 FFAGG 162 (379)
T ss_pred HHHHH
Confidence 88875
No 32
>PHA01514 O-antigen conversion protein C
Probab=30.24 E-value=6.1e+02 Score=25.89 Aligned_cols=81 Identities=16% Similarity=0.226 Sum_probs=44.8
Q ss_pred CccchhHhHHhHHHHHhcC---CCCchHHHHHHHHHHHHHHHHHHHHHHhccc-chHHHHHHHHHHHhhhcccchhhHHH
Q psy6437 38 GSYRPLTVLTFRLNYLACG---LKPRSFHLINNLLHSAITYLVYILSSYVLPN-RRARLFASLIFAVHPIHTEAVSGIVG 113 (254)
Q Consensus 38 ~~yRPL~~lsf~l~~~l~G---~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~-~~~A~laAlLFavHPihtEaV~~Iv~ 113 (254)
+..||++-+.+.+=- +| .|.....+ ++-=++-++.+..+.+..++. .+.+.+++++....|---|.. +.
T Consensus 48 ~~GRPlad~l~~~L~--~g~~~~Di~PLpl--iLs~~~ls~a~~~l~~~~f~~~~~~~~L~~~~l~~NPffLqNL---SY 120 (485)
T PHA01514 48 GNGRPLSDFIFYIIN--FGTPIIDASPLPL--MLGIVILALALSCIREKLFGDDYITASLCFMMILANPFFIENL---SY 120 (485)
T ss_pred hcCchHHHHHHHHHc--CCCCccccccHHH--HHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHhCHHHHhhh---hh
Confidence 449999997774321 12 13333332 111112222233334555554 355777777777799988865 48
Q ss_pred HhhHHHHHHHHH
Q psy6437 114 RADLLCTLFYLS 125 (254)
Q Consensus 114 R~~lLa~lF~Ll 125 (254)
|-|.+.....++
T Consensus 121 rfDsl~Malsv~ 132 (485)
T PHA01514 121 RYDSLTMCMSVA 132 (485)
T ss_pred ccCcHHHHHHHH
Confidence 888877655544
No 33
>PF10724 DUF2516: Protein of unknown function (DUF2516); InterPro: IPR019662 This entry represents a conserved protein in Actinobacteria. The function is not known.
Probab=25.75 E-value=3.5e+02 Score=21.69 Aligned_cols=47 Identities=11% Similarity=-0.010 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHhhcccccccccc
Q psy6437 183 TICAVMRRTALAGAAMIS-KETGVTVLLICICIELLHNKVCTHLKNSS 229 (254)
Q Consensus 183 ~~~~~lla~~~~~lAlLS-KE~aI~lp~~~~l~d~~~~~~~~~~~~~~ 229 (254)
+..|..+..++.++.++. -..++.-..-+...-++...++|.+|+..
T Consensus 46 K~~Wl~Ilg~a~l~~~l~~~~~~~l~lig~vaa~VYl~DVRPal~~v~ 93 (100)
T PF10724_consen 46 KPFWLAILGVAALVGLLFLGPLGFLGLIGAVAAGVYLVDVRPALREVQ 93 (100)
T ss_pred chHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhheeecccHHHHHhc
Confidence 445776666666666666 23333333334444556678999998777
No 34
>KOG2292|consensus
Probab=25.10 E-value=2.9e+02 Score=29.06 Aligned_cols=64 Identities=23% Similarity=0.306 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcc-cchhhHHHHhhHHHHHHHHHHHHHHHHHHHhc
Q psy6437 72 AITYLVYILSSYVLPNRRARLFASLIFAVHPIHT-EAVSGIVGRADLLCTLFYLSTILIYIKWIKLG 137 (254)
Q Consensus 72 l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPiht-EaV~~Iv~R~~lLa~lF~Llal~~yl~~~~~~ 137 (254)
+.++..|.+.+.+-.. .+.++||.+-|+-|--+ -+|+. +.-.|-.+-+-.+.+.++|+|+.+.+
T Consensus 129 ~TsiaTY~ltkEl~~~-gaGL~AA~fiaivPgYiSRSVAG-SYDNE~IAIfal~~T~ylwiKavkTG 193 (751)
T KOG2292|consen 129 LTSIATYLLTKELKSA-GAGLLAAAFIAIVPGYISRSVAG-SYDNEGIAIFALLFTYYLWIKAVKTG 193 (751)
T ss_pred hHHHHHHHHHHHHhcc-cccHHHHHHHhhCcccccccccc-cccchHHHHHHHHHHHHHHHHHhhcc
Confidence 3455566666665544 47888999999999655 34432 34456666666777899999998765
No 35
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=23.19 E-value=8.7e+02 Score=25.35 Aligned_cols=59 Identities=20% Similarity=0.252 Sum_probs=39.0
Q ss_pred cchhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcccc--hHHHHHHHHHHHh
Q psy6437 40 YRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNR--RARLFASLIFAVH 101 (254)
Q Consensus 40 yRPL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~--~~A~laAlLFavH 101 (254)
..|+.++++.+... .=|..+-...++=-.++++..+..+|+...++ ..++++|++++.-
T Consensus 73 ~sPf~ll~~lfp~~---~~~~~~~~~~~lk~~lag~~~~~~l~~~~~~~~~~~~~i~s~~Yafs 133 (843)
T PF09586_consen 73 GSPFNLLSLLFPAS---QMPYAILLLIILKIGLAGLFFYLYLRKFKKSRSDWAALIGSLLYAFS 133 (843)
T ss_pred cCHHHHHHHHcchh---hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHH
Confidence 48888877643311 12344444544334556667788888888766 8999999999876
No 36
>PLN02841 GPI mannosyltransferase
Probab=20.70 E-value=8.8e+02 Score=24.46 Aligned_cols=67 Identities=6% Similarity=0.157 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhHHHHHHHHHHHHHHH
Q psy6437 63 HLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYLSTILIYI 131 (254)
Q Consensus 63 HlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~lLa~lF~Llal~~yl 131 (254)
.+.=.+.=++++++++.+.+..-.....+...+.+|...|.-.-. -+.|-.|.+..++.+.++++-.
T Consensus 86 k~LF~l~Dll~a~ll~~il~~~~~~~~~~~~~a~~wL~NPlti~i--strGSse~i~~~lvl~~L~~l~ 152 (440)
T PLN02841 86 KFLFSAADLLVGLFIHTILRLRGVPEKVCTWSVMVWLFNPFTFTI--GTRGNCEPIVCAVILWILICLM 152 (440)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHhCcHHHHH--hcccchHHHHHHHHHHHHHHHH
Confidence 333344445666666666554322122455668899999987632 3457788888888888887664
Done!