BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6439
(114 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P31478|VATF_MANSE V-type proton ATPase subunit F OS=Manduca sexta GN=VHA14 PE=2 SV=1
Length = 124
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 95/114 (83%), Positives = 108/114 (94%)
Query: 1 MALHSAVKGKLLAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFI 60
MALH+AVKGKL++VIGDEDTCVGFLLGGIGEINK+R PNF+VVDKNT VS+IEE F++F+
Sbjct: 1 MALHAAVKGKLISVIGDEDTCVGFLLGGIGEINKNRHPNFMVVDKNTPVSEIEECFKRFV 60
Query: 61 KRDDVDIILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKDSILRRAK 114
KRDD+DIILINQNVAEL+RH ID HT P+P+VLEIPSKDHPYDASKDSILRRAK
Sbjct: 61 KRDDIDIILINQNVAELVRHVIDAHTAPVPSVLEIPSKDHPYDASKDSILRRAK 114
>sp|Q24583|VATF1_DROME V-type proton ATPase subunit F 1 OS=Drosophila melanogaster
GN=Vha14-1 PE=1 SV=1
Length = 124
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 92/114 (80%), Positives = 108/114 (94%)
Query: 1 MALHSAVKGKLLAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFI 60
MALHSA+KGKL++VIGDEDTCVGFLLGG+GEINK+R PNF+VVDKNT+VS++E+ F++F+
Sbjct: 1 MALHSAIKGKLISVIGDEDTCVGFLLGGVGEINKNRHPNFMVVDKNTAVSELEDCFKRFL 60
Query: 61 KRDDVDIILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKDSILRRAK 114
KRDD+DIILINQN AELIRH ID HT P+PAVLEIPSKDHPYDASKDSILRRA+
Sbjct: 61 KRDDIDIILINQNCAELIRHVIDAHTSPVPAVLEIPSKDHPYDASKDSILRRAR 114
>sp|Q1HQK8|VATF_AEDAE V-type proton ATPase subunit F OS=Aedes aegypti GN=AAEL002464 PE=2
SV=1
Length = 127
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 95/114 (83%), Positives = 106/114 (92%)
Query: 1 MALHSAVKGKLLAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFI 60
MAL SAVKGKL++VIGDEDTCVGFLLGGIGEINK+R PNF+VVDKNT+VS+IE+ F++FI
Sbjct: 1 MALLSAVKGKLISVIGDEDTCVGFLLGGIGEINKNRHPNFMVVDKNTAVSEIEDCFKRFI 60
Query: 61 KRDDVDIILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKDSILRRAK 114
KRDD+DIILINQN AE+IRH ID HT P PAVLEIPSKDHPYDASKDSILRRAK
Sbjct: 61 KRDDIDIILINQNYAEMIRHVIDAHTSPTPAVLEIPSKDHPYDASKDSILRRAK 114
>sp|O44091|VATF1_DROPS V-type proton ATPase subunit F 1 OS=Drosophila pseudoobscura
pseudoobscura GN=Vha14 PE=2 SV=2
Length = 124
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 92/114 (80%), Positives = 107/114 (93%)
Query: 1 MALHSAVKGKLLAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFI 60
MALHSA+KGKL++VIGDEDTCVGFLLGG+GEINK+R PNF+VVDKNT VS++E+ F++F+
Sbjct: 1 MALHSAIKGKLISVIGDEDTCVGFLLGGVGEINKNRHPNFMVVDKNTPVSELEDCFKRFL 60
Query: 61 KRDDVDIILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKDSILRRAK 114
KRDD+DIILINQN AELIRH ID HT P+PAVLEIPSKDHPYDASKDSILRRA+
Sbjct: 61 KRDDIDIILINQNCAELIRHVIDAHTSPVPAVLEIPSKDHPYDASKDSILRRAR 114
>sp|Q17029|VATF_ANOGA V-type proton ATPase subunit F OS=Anopheles gambiae GN=Vha14 PE=2
SV=2
Length = 127
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 94/114 (82%), Positives = 106/114 (92%)
Query: 1 MALHSAVKGKLLAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFI 60
MAL SA+KGKL++VIGDEDTCVGFLLGG+GEINK+R PNF+VVDKNT+VS+IE+ F++FI
Sbjct: 1 MALLSAMKGKLISVIGDEDTCVGFLLGGVGEINKNRHPNFMVVDKNTAVSEIEDCFKRFI 60
Query: 61 KRDDVDIILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKDSILRRAK 114
KRDD+DIILINQN AELIRH ID HT P PAVLEIPSKDHPYDASKDSILRRAK
Sbjct: 61 KRDDIDIILINQNYAELIRHVIDSHTAPTPAVLEIPSKDHPYDASKDSILRRAK 114
>sp|Q16864|VATF_HUMAN V-type proton ATPase subunit F OS=Homo sapiens GN=ATP6V1F PE=1 SV=2
Length = 119
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 76/109 (69%), Positives = 97/109 (88%)
Query: 6 AVKGKLLAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDV 65
A +GKL+AVIGDEDT GFLLGGIGE+NK+R PNFLVV+K+T++++IE+ FR+F+ RDD+
Sbjct: 2 AGRGKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDI 61
Query: 66 DIILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKDSILRRAK 114
IILINQ +AE++RH +D H Q IPAVLEIPSK+HPYDA+KDSILRRA+
Sbjct: 62 GIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPYDAAKDSILRRAR 110
>sp|P50408|VATF_RAT V-type proton ATPase subunit F OS=Rattus norvegicus GN=Atp6v1f PE=1
SV=1
Length = 119
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 76/109 (69%), Positives = 97/109 (88%)
Query: 6 AVKGKLLAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDV 65
A +GKL+AVIGDEDT GFLLGGIGE+NK+R PNFLVV+K+T++++IE+ FR+F+ RDD+
Sbjct: 2 AGRGKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDI 61
Query: 66 DIILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKDSILRRAK 114
IILINQ +AE++RH +D H + IPAVLEIPSK+HPYDA+KDSILRRAK
Sbjct: 62 GIILINQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRAK 110
>sp|Q9D1K2|VATF_MOUSE V-type proton ATPase subunit F OS=Mus musculus GN=Atp6v1f PE=1 SV=2
Length = 119
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 76/109 (69%), Positives = 97/109 (88%)
Query: 6 AVKGKLLAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDV 65
A +GKL+AVIGDEDT GFLLGGIGE+NK+R PNFLVV+K+T++++IE+ FR+F+ RDD+
Sbjct: 2 AGRGKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDI 61
Query: 66 DIILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKDSILRRAK 114
IILINQ +AE++RH +D H + IPAVLEIPSK+HPYDA+KDSILRRAK
Sbjct: 62 GIILINQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRAK 110
>sp|Q23680|VATF_CAEEL Probable V-type proton ATPase subunit F OS=Caenorhabditis elegans
GN=vha-9 PE=3 SV=1
Length = 121
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 78/112 (69%), Positives = 96/112 (85%)
Query: 3 LHSAVKGKLLAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKR 62
+ SA KGK+LAVIGDEDT VGFLLGG+GE+NK R+PN+L+VDK T+V +IEEAF F R
Sbjct: 1 MASAAKGKILAVIGDEDTVVGFLLGGVGELNKARKPNYLIVDKQTTVQEIEEAFNGFCAR 60
Query: 63 DDVDIILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKDSILRRAK 114
DD+ IILINQ++AE+IR+ +D+HTQ IPAVLEIPSK+ PYD SKDSIL RA+
Sbjct: 61 DDIAIILINQHIAEMIRYAVDNHTQSIPAVLEIPSKEAPYDPSKDSILNRAR 112
>sp|Q28029|VATF_BOVIN V-type proton ATPase subunit F OS=Bos taurus GN=ATP6V1F PE=3 SV=2
Length = 119
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 75/109 (68%), Positives = 97/109 (88%)
Query: 6 AVKGKLLAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDV 65
A +GKL+AVIGDEDT GFLLGGIGE+NK+R PNFLVV+K+T++++IE+ FR+F+ RDD+
Sbjct: 2 AGRGKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDI 61
Query: 66 DIILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKDSILRRAK 114
IILINQ +AE++RH +D H + IPAVLEIPSK+HPYDA+KDSILRRA+
Sbjct: 62 GIILINQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRAR 110
>sp|Q9I8H3|VATF_XENLA V-type proton ATPase subunit F (Fragment) OS=Xenopus laevis
GN=atp6s14 PE=3 SV=1
Length = 110
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 77/101 (76%), Positives = 89/101 (88%)
Query: 14 VIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDVDIILINQN 73
VIGDEDT GFLLGGIGE+NK+R+PNFLVV+K TSV++IEE FR F+ RDD+ IILINQ
Sbjct: 1 VIGDEDTVTGFLLGGIGELNKNRKPNFLVVEKETSVTEIEETFRSFLNRDDIGIILINQF 60
Query: 74 VAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKDSILRRAK 114
+AE+IRH ID HT IPAVLEIPSK+HPYDA+KDSILRRAK
Sbjct: 61 IAEMIRHVIDTHTISIPAVLEIPSKEHPYDATKDSILRRAK 101
>sp|Q9ZQX4|VATF_ARATH V-type proton ATPase subunit F OS=Arabidopsis thaliana GN=VHA-F
PE=2 SV=1
Length = 128
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 81/109 (74%)
Query: 6 AVKGKLLAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDV 65
A L+A+I DEDT VGFL+ G+G ++ R+ N+L+VD T+V IE+AF++F RDD+
Sbjct: 9 ARNSALIAMIADEDTVVGFLMAGVGNVDIRRKTNYLIVDSKTTVRQIEDAFKEFSARDDI 68
Query: 66 DIILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKDSILRRAK 114
IIL++Q +A +IR +D + +P+PA+LEIPSKDHPYD + DS+L R K
Sbjct: 69 AIILLSQYIANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVK 117
>sp|Q55AH5|VATF_DICDI V-type proton ATPase subunit F OS=Dictyostelium discoideum GN=vatF
PE=3 SV=1
Length = 120
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 80/114 (70%)
Query: 1 MALHSAVKGKLLAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFI 60
MA S + L+AVIGDED GFLL G+G+ +K + NFLVVD TS + IE AF+ F
Sbjct: 1 MATKSLSETALVAVIGDEDVVTGFLLAGVGQKDKKKNENFLVVDSKTSQAKIETAFKSFT 60
Query: 61 KRDDVDIILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKDSILRRAK 114
R+D+ II+I Q VA+ IR+ ID++ Q IP +LEIPSKDHPYD KDS++ + K
Sbjct: 61 TRNDIAIIMITQKVADEIRYLIDEYHQVIPTILEIPSKDHPYDPKKDSVMLKVK 114
>sp|A1DH48|VATF_NEOFI V-type proton ATPase subunit F OS=Neosartorya fischeri (strain ATCC
1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=vma7 PE=3
SV=1
Length = 124
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 75/108 (69%), Gaps = 3/108 (2%)
Query: 10 KLLAVIGDEDTCVGFLLGGIGEIN--KHRQPNFLVVDKNTSVSDIEEAFRKFIK-RDDVD 66
+ LAVIGDED+ G LL GIG + Q NFLVVD T S IE+AF+ F + R D+
Sbjct: 12 QFLAVIGDEDSVTGLLLAGIGHVTDGPDAQRNFLVVDSKTETSAIEKAFQNFTQERKDIA 71
Query: 67 IILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKDSILRRAK 114
++LINQ++AE IRH +D P PAVLEIPSKDHPYD KDS+L+R +
Sbjct: 72 VLLINQHIAERIRHSVDSFADPFPAVLEIPSKDHPYDPEKDSVLKRVR 119
>sp|A6RRW0|VATF_BOTFB V-type proton ATPase subunit F OS=Botryotinia fuckeliana (strain
B05.10) GN=vma7 PE=3 SV=1
Length = 124
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 10 KLLAVIGDEDTCVGFLLGGIGEINK--HRQPNFLVVDKNTSVSDIEEAFRKFI-KRDDVD 66
+ LAVIGDED+ G LL GIG + Q NFLVVD T + IEEAF +F +R D+
Sbjct: 12 QFLAVIGDEDSVTGLLLAGIGHVTSPPDSQKNFLVVDNKTDNAAIEEAFERFTTERKDIG 71
Query: 67 IILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKDSILRRAK 114
I+LINQ++AE IRH +D +T PA+LEIPSKDHPYD KDS+LRR +
Sbjct: 72 ILLINQHIAERIRHRVDTYTAAFPALLEIPSKDHPYDPEKDSVLRRVR 119
>sp|Q9Y756|VATF_NEUCR V-type proton ATPase subunit F OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=vma-7 PE=3 SV=1
Length = 124
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 74/108 (68%), Gaps = 3/108 (2%)
Query: 10 KLLAVIGDEDTCVGFLLGGIGEINK--HRQPNFLVVDKNTSVSDIEEAFRKFI-KRDDVD 66
+ LAVIGDED+ G LL GIG + Q NFLVVD T + IE AF +F +R D+
Sbjct: 12 QFLAVIGDEDSVTGLLLAGIGHVTAPPDSQKNFLVVDNKTDNAAIEAAFDRFTTERKDIG 71
Query: 67 IILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKDSILRRAK 114
I+LINQ++A+ IRH +D HT P VLEIPSKDHPYD KDS+LRR +
Sbjct: 72 IVLINQHIADRIRHRVDTHTAAFPTVLEIPSKDHPYDPEKDSVLRRVR 119
>sp|O43046|VATF_SCHPO V-type proton ATPase subunit F OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=vma7 PE=3 SV=1
Length = 120
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
Query: 1 MALHSAVKGKLLAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFI 60
M+ S + L++VIGD+DT G LL G G++N++ NF ++ + T+ I EAF +
Sbjct: 1 MSSQSYRERTLVSVIGDDDTVTGMLLAGTGQVNENGDKNFFIITQKTTDEQIAEAFDDYT 60
Query: 61 -KRDDVDIILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKDSILRRAK 114
KR D+ I+LINQ AE IR I++H Q PAVLEIPSKD PYD KDSILRR +
Sbjct: 61 TKRKDIAIVLINQFAAERIRDRIENHVQAFPAVLEIPSKDDPYDPEKDSILRRVR 115
>sp|P39111|VATF_YEAST V-type proton ATPase subunit F OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=VMA7 PE=1 SV=1
Length = 118
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
Query: 6 AVKGKLLAVIGDEDTCVGFLLGGIGEINKHRQP-NFLVVDKN-TSVSDIEEAFRKFIK-R 62
A K L+AVI DEDT G LL GIG+I Q NF V + T+ +I + F F + R
Sbjct: 2 AEKRTLIAVIADEDTTTGLLLAGIGQITPETQEKNFFVYQEGKTTKEEITDKFNHFTEER 61
Query: 63 DDVDIILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKDSILRRAK 114
DD+ I+LINQ++AE IR +D T PA+LEIPSKDHPYD KDS+L+R +
Sbjct: 62 DDIAILLINQHIAENIRARVDSFTNAFPAILEIPSKDHPYDPEKDSVLKRVR 113
>sp|A7TMI5|VATF_VANPO V-type proton ATPase subunit F OS=Vanderwaltozyma polyspora (strain
ATCC 22028 / DSM 70294) GN=VMA7 PE=3 SV=1
Length = 119
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 74/113 (65%), Gaps = 3/113 (2%)
Query: 5 SAVKGKLLAVIGDEDTCVGFLLGGIGEINKH-RQPNFLVV-DKNTSVSDIEEAFRKFIK- 61
S K L+AVIGDEDT G LL GIG+I K + NF + D T+ I F + +
Sbjct: 2 SVDKRTLIAVIGDEDTTTGLLLAGIGQITKETNEKNFFIYEDGKTTKEQILNNFINYTQE 61
Query: 62 RDDVDIILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKDSILRRAK 114
R D+ I+LINQ++AE IR ID++T PA+LEIPSKDHPYD KDS+L+R +
Sbjct: 62 RQDIAILLINQHIAEKIRSDIDNYTNAFPAILEIPSKDHPYDPEKDSVLKRVR 114
>sp|Q9VNL3|VATF2_DROME Probable V-type proton ATPase subunit F 2 OS=Drosophila
melanogaster GN=Vha14-2 PE=3 SV=2
Length = 129
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 53/69 (76%)
Query: 46 NTSVSDIEEAFRKFIKRDDVDIILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDAS 105
+T+ IEE F+KF++R D+ IILINQ A++IR +D H +P VLEIPSK HPYD+S
Sbjct: 51 DTTPKQIEECFKKFLRRPDIVIILINQVYADMIRPTVDAHNLAVPTVLEIPSKQHPYDSS 110
Query: 106 KDSILRRAK 114
+DSIL+RA+
Sbjct: 111 RDSILKRAQ 119
>sp|O27037|VATF_METTH V-type ATP synthase subunit F OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=atpF PE=3 SV=1
Length = 106
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 12 LAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDVDIILIN 71
+AV+GD DT GF LGG+ E P+ + EE R I RD II++
Sbjct: 5 IAVVGDRDTVTGFRLGGVREGYVVETPD-----------EAEETIRNLI-RDGFSIIIVT 52
Query: 72 QNVAELIRHCIDDHTQP--IPAVLEIPSKDHPYDASKDSI 109
+ + + +R I++ T +P ++EIP K P + D +
Sbjct: 53 EKIGDELREFIEETTSSSALPMIIEIPDKTGPSERETDPL 92
>sp|Q8U4A7|VATF_PYRFU V-type ATP synthase subunit F OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=atpF PE=1 SV=1
Length = 103
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 16/90 (17%)
Query: 12 LAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEA---FRKFIKRDDVDII 68
+ V+GD DT VGF L G+ E ++ + S+ +E A R+ ++RDDV II
Sbjct: 3 IVVMGDSDTVVGFRLAGVHEAYEY----------DESLESVERARNKLRELLERDDVGII 52
Query: 69 LINQNVAELIRHCIDDHTQPIPAVLEIPSK 98
LI + +A+ I + P +L+IP K
Sbjct: 53 LITERLAQRIGSLPE---VKFPIILQIPDK 79
>sp|O29102|VATF_ARCFU V-type ATP synthase subunit F OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=atpF PE=1 SV=1
Length = 101
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 15/83 (18%)
Query: 10 KLLAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDVDIIL 69
K LAV+GD D +GF+L GI +I + TS +I +A +KRDDV +++
Sbjct: 2 KKLAVVGDPDFTIGFMLAGISDIYEV-----------TSDEEIVKAVEDVLKRDDVGVVI 50
Query: 70 INQNVAE----LIRHCIDDHTQP 88
I Q + ++R ID+ +P
Sbjct: 51 IKQEYLKKLPPVLRREIDEKVEP 73
>sp|O06503|VATF_DESSY V-type ATP synthase subunit F OS=Desulfurococcus sp. (strain SY)
GN=atpF PE=3 SV=1
Length = 102
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 12 LAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDVDIILIN 71
+AV+GD DT +GF L G E+ + D + + ++ ++R DV IILI
Sbjct: 3 IAVLGDRDTALGFKLAGAHEV-------YAFEDTPLEMERLRNKLKELVERGDVGIILIT 55
Query: 72 QNVAELIRHCIDDHTQPIPAVLEIPSKDHPY--DASKDSILRRA 113
+ A+ R I D T IP +L++P K + + I+RRA
Sbjct: 56 ERFAQ--RVEIPDVT--IPIILQVPDKSGSKFGEEALREIVRRA 95
>sp|C5A335|VATF_THEGJ V-type ATP synthase subunit F OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=atpF PE=3 SV=1
Length = 102
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 19/107 (17%)
Query: 12 LAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEA---FRKFIKRDDVDII 68
+AV+GD DT +GF L G E+ +S +IE A ++ ++RDD+ II
Sbjct: 3 IAVMGDPDTALGFKLAGAHEVYSF----------GSSPLEIERANNKLKELVERDDIGII 52
Query: 69 LINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPY--DASKDSILRRA 113
LI + +A+ ++ P +L+IP K +A I+RRA
Sbjct: 53 LITETLAQ----RVEVPEVEFPIILQIPDKSGSRFGEAQLREIVRRA 95
>sp|Q5JIR4|VATF_PYRKO V-type ATP synthase subunit F OS=Pyrococcus kodakaraensis (strain
ATCC BAA-918 / JCM 12380 / KOD1) GN=atpF PE=3 SV=1
Length = 102
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 13/104 (12%)
Query: 12 LAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDVDIILIN 71
+AV+GD DT +GF L G+ E + + ++ + I+R+DV IILI
Sbjct: 3 IAVLGDSDTVLGFRLAGVHEAYAFEETPL-------DIERLKNKLNELIEREDVGIILIT 55
Query: 72 QNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASK--DSILRRA 113
+ +AE + I D PI +L++P K K I+RRA
Sbjct: 56 ERLAEKVE--IPDVKLPI--ILQVPDKSGSKLGEKALREIVRRA 95
>sp|C6A5E9|VATF_THESM V-type ATP synthase subunit F OS=Thermococcus sibiricus (strain MM
739 / DSM 12597) GN=atpF PE=3 SV=1
Length = 102
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 13/104 (12%)
Query: 12 LAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDVDIILIN 71
+ V+GD+DT +GF L G+ E + D + + + I+R+DV +ILI
Sbjct: 3 IVVLGDKDTVLGFRLAGVHE-------TYSFEDTTHEIERVRNKIMELIEREDVGVILIT 55
Query: 72 QNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKD--SILRRA 113
+ +A+ R I D PI +L+IP K + I+RRA
Sbjct: 56 ERLAQ--RVEIPDVAFPI--ILQIPDKYGSLYGEEQLREIVRRA 95
>sp|O57727|VATF_PYRHO V-type ATP synthase subunit F OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 /
OT-3) GN=atpF PE=3 SV=1
Length = 103
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 12 LAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDVDIILIN 71
+ ++GD DT VGF L GI H F + S+ ++ ++RDDV IILI
Sbjct: 3 VVIMGDSDTVVGFRLAGI-----HEAYEFDL--SELSIERARNKLKELVERDDVGIILIT 55
Query: 72 QNVAELIRHCIDDHTQPIPAVLEIPSK 98
+ +A+ I + +P +L+IP K
Sbjct: 56 ERLAQKIGELPQVN---LPIILQIPDK 79
>sp|Q9UXU6|VATF_PYRAB V-type ATP synthase subunit F OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=atpF PE=3 SV=1
Length = 103
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 12 LAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDVDIILIN 71
+ V+GD DT GF L G+ E + +F S+ ++ ++RDDV IILI
Sbjct: 3 VVVMGDSDTVTGFRLAGVHEAYEF---DF----SELSIERARNKLKELVERDDVGIILIT 55
Query: 72 QNVAELIRHCIDDHTQ-PIPAVLEIPSK 98
+ +A+ I D Q +P +L+IP K
Sbjct: 56 ERLAQ----RIGDLPQVNLPIILQIPDK 79
>sp|B6YV13|VATF_THEON V-type ATP synthase subunit F OS=Thermococcus onnurineus (strain
NA1) GN=atpF PE=3 SV=1
Length = 102
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 12 LAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDVDIILIN 71
+AV+GD+DT +GF L G E+ D + ++ + ++R+D+ IILI
Sbjct: 3 IAVLGDKDTALGFKLAGAHEVYSFE-------DTPLDMERLKNKLNELVEREDIGIILIT 55
Query: 72 QNVAELIRHCIDDHTQPIPAVLEIPSKDHPY--DASKDSILRRA 113
+ + I + D T PI +L++P K + + I+RRA
Sbjct: 56 ERFVQKI--GLPDVTFPI--ILQVPDKSGSKFGEEAIKEIVRRA 95
>sp|A6UP53|VATF_METVS V-type ATP synthase subunit F OS=Methanococcus vannielii (strain SB
/ ATCC 35089 / DSM 1224) GN=atpF PE=3 SV=1
Length = 99
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 14/98 (14%)
Query: 12 LAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDVDIILIN 71
+ V+GD D VGF L G+ ++ + + P +A + ++ +I+
Sbjct: 3 IGVVGDSDVAVGFRLAGLTDVYEVKSP-----------EQASKAIEELDNNAEIGLIITT 51
Query: 72 QNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKDSI 109
+ + E IR I + + ++E+P K+ P KD +
Sbjct: 52 ERIGEGIRETIANAKK---VIVEVPDKNGPIVREKDPV 86
>sp|Q2NF86|VATF_METST V-type ATP synthase subunit F OS=Methanosphaera stadtmanae (strain
DSM 3091) GN=atpF PE=3 SV=1
Length = 106
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 12 LAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDVDIILIN 71
+A++ D DT GF+LGGI + F V +K + + +++ + D+ II+
Sbjct: 5 IAIMADPDTVTGFMLGGI-------KSGFPVHNKEEAKTTLKQ-----LVDDEYSIIITT 52
Query: 72 QNVAELIRHCIDDHT--QPIPAVLEIPSKDHPYDASKDSI 109
+ + + +R I +T + +P ++E+P K + D +
Sbjct: 53 EKIGDELRDDITKYTGSKALPMIIEVPDKSGSHKRETDPM 92
>sp|Q6LYE8|VATF_METMP V-type ATP synthase subunit F OS=Methanococcus maripaludis (strain
S2 / LL) GN=atpF PE=3 SV=1
Length = 99
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
Query: 12 LAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDVDIILIN 71
+ V+GD D GF L G+ ++ + P +A + ++ +I+
Sbjct: 3 IGVVGDPDVVAGFRLAGLTDVYEVNSP-----------EQAAKAIEELNSNSEIGLIITT 51
Query: 72 QNVAELIRHCIDDHTQPIPAVLEIPSKDHPYDASKDSI 109
+ + E IR I + V+E+P K+ P D +
Sbjct: 52 ERIGEKIRDAISSIKK---VVVEVPDKNGPIVRENDPV 86
>sp|A6UT34|VATF_META3 V-type ATP synthase subunit F OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=atpF PE=3 SV=1
Length = 99
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 14/88 (15%)
Query: 12 LAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDVDIILIN 71
+AV+GD D +GF L G+ ++ + + + D R+ R D+ +I+
Sbjct: 3 IAVVGDLDMTMGFRLAGLEDVYEVK-----------NAEDALNTIRELDNRADIGLIITT 51
Query: 72 QNVAELIRHCIDDHTQPIPAVLEIPSKD 99
+ + E IR I + + I +EIP K+
Sbjct: 52 ERLGEEIRDSISNLKKFI---VEIPDKN 76
>sp|Q0HTG8|G1092_SHESR Glycosyl hydrolase family 109 protein 2 OS=Shewanella sp. (strain
MR-7) GN=Shewmr7_2602 PE=3 SV=1
Length = 456
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 5 SAVKGKLLAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDD 64
S ++G + I D DT V L IN++ + DK S + A+R + RDD
Sbjct: 73 SRIEGARITAICDTDTLV--LARAEKAINEYGR------DKPAYFSKGDHAYRDLLNRDD 124
Query: 65 VDIILI 70
VDI++I
Sbjct: 125 VDIVVI 130
>sp|Q0HH61|G1092_SHESM Glycosyl hydrolase family 109 protein 2 OS=Shewanella sp. (strain
MR-4) GN=Shewmr4_2535 PE=3 SV=1
Length = 456
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 5 SAVKGKLLAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDD 64
S ++G + I D DT V L IN++ + DK S + A+R + RDD
Sbjct: 73 SRIEGARITAICDTDTLV--LARAEKAINEYGR------DKPAYFSKGDHAYRDLLNRDD 124
Query: 65 VDIILI 70
VDI++I
Sbjct: 125 VDIVVI 130
>sp|A0KYQ9|G1092_SHESA Glycosyl hydrolase family 109 protein 2 OS=Shewanella sp. (strain
ANA-3) GN=Shewana3_2701 PE=3 SV=1
Length = 456
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 5 SAVKGKLLAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDD 64
S ++G + I D DT V L IN++ + DK S + A+R + RDD
Sbjct: 73 SRIEGARITAICDTDTLV--LARAEKAINEYGR------DKPAYFSKGDHAYRDLLNRDD 124
Query: 65 VDIILI 70
VDI++I
Sbjct: 125 VDIVVI 130
>sp|P28607|ARS_PSEVC Arylsulfatase OS=Pseudoalteromonas carrageenovora GN=atsA PE=3 SV=1
Length = 328
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 17 DEDTCVGFLLGGIGEINKHRQP-NFLVVDKNTSVSDIEEAFRKFIKRDDVDIILINQNV- 74
+E +G + G I KH QP N ++V+ NT V D + + + +DI +NV
Sbjct: 30 NEWITLGTMAGPIPNA-KHSQPANAMLVNGNTYVVDAGDGTAGQLAKVGLDI----KNVD 84
Query: 75 AELIRHCIDDHTQPIPAVLEI 95
A + H DHT +PA+L +
Sbjct: 85 AVFLSHLHFDHTGGLPAILSL 105
>sp|Q60185|VATF_METMA V-type ATP synthase subunit F OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=atpF PE=1 SV=1
Length = 101
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 15/81 (18%)
Query: 12 LAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDVDIILIN 71
LAVIG + GF L GI ++ + P+ + E A R ++ V I++++
Sbjct: 3 LAVIGKSEFVTGFRLAGISKV--YETPD---------IPATESAVRSVLEDKSVGILVMH 51
Query: 72 Q----NVAELIRHCIDDHTQP 88
N+ E++R +++ QP
Sbjct: 52 NDDIGNLPEVLRKNLNESVQP 72
>sp|Q5R639|GBG4_PONAB Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4
OS=Pongo abelii GN=GNG4 PE=3 SV=1
Length = 75
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/63 (22%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 44 DKNTSVSDIEEAFRKFIKRDDVDIILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYD 103
+ TS+S +A + +D + ++Q A+L+ +C + H + P ++ +P+ ++P+
Sbjct: 8 NSTTSISQARKAVEQLKMEACMDRVKVSQAAADLLAYC-EAHVREDPLIIPVPASENPFR 66
Query: 104 ASK 106
K
Sbjct: 67 EKK 69
>sp|P50150|GBG4_HUMAN Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4
OS=Homo sapiens GN=GNG4 PE=1 SV=1
Length = 75
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/63 (22%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 44 DKNTSVSDIEEAFRKFIKRDDVDIILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYD 103
+ TS+S +A + +D + ++Q A+L+ +C + H + P ++ +P+ ++P+
Sbjct: 8 NSTTSISQARKAVEQLKMEACMDRVKVSQAAADLLAYC-EAHVREDPLIIPVPASENPFR 66
Query: 104 ASK 106
K
Sbjct: 67 EKK 69
>sp|A0LZD4|SUCC_GRAFK Succinyl-CoA ligase [ADP-forming] subunit beta OS=Gramella forsetii
(strain KT0803) GN=sucC PE=3 SV=1
Length = 398
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 39 NFLVVDKNTSVSDIEEAFRKFIKRDDVDIILIN 71
NFL V +EEAFR +K D V+ IL+N
Sbjct: 294 NFLDVGGTADAKRVEEAFRLILKDDKVEAILVN 326
>sp|Q8RI76|VATF_FUSNN V-type ATP synthase subunit F OS=Fusobacterium nucleatum subsp.
nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 /
LMG 13131) GN=atpF PE=3 SV=1
Length = 105
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 14/87 (16%)
Query: 12 LAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDVDIILIN 71
+AVIGD+D+ + F + G+ F+ +D + I+ I +++ II +
Sbjct: 7 IAVIGDKDSVLAFKILGVDV--------FITLDAQEARKTIDR-----IAKENYGIIFVT 53
Query: 72 QNVAELIRHCIDDH-TQPIPAVLEIPS 97
+ +A+ I I + ++ IPAV+ IPS
Sbjct: 54 EQLAKDIPETIKRYNSEIIPAVILIPS 80
>sp|Q8XJW4|VATF_CLOPE V-type ATP synthase subunit F OS=Clostridium perfringens (strain 13
/ Type A) GN=atpF PE=3 SV=1
Length = 105
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 20/104 (19%)
Query: 10 KLLAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKR---DDVD 66
K + V+GD+D+ + F GI F VV+ +E RK I +
Sbjct: 5 KKIGVVGDKDSVLAFKALGI--------DVFPVVE--------DEEARKTIDKLAMTGYA 48
Query: 67 IILINQNVAELIRHCIDDHT-QPIPAVLEIPSKDHPYDASKDSI 109
+I + ++VA+ I I+ +T Q +PAV+ IPS + K I
Sbjct: 49 VIFVTEHVAKNIEETIERYTRQVLPAVILIPSNQGTLNIGKQRI 92
>sp|P50153|GBG4_MOUSE Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4
OS=Mus musculus GN=Gng4 PE=2 SV=1
Length = 75
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/63 (20%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 44 DKNTSVSDIEEAFRKFIKRDDVDIILINQNVAELIRHCIDDHTQPIPAVLEIPSKDHPYD 103
+ TS+S +A + +D + ++Q ++L+ +C + H + P ++ +P+ ++P+
Sbjct: 8 NSTTSISQARKAVEQLKMEACMDRVKVSQAASDLLAYC-EAHVREDPLIIPVPASENPFR 66
Query: 104 ASK 106
K
Sbjct: 67 EKK 69
>sp|Q8TIJ2|VATF_METAC V-type ATP synthase subunit F OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
GN=atpF PE=3 SV=1
Length = 101
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 15/86 (17%)
Query: 12 LAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDVDIILIN 71
LAVIG + GF L GI ++ + +VD +S E A + ++ + I++++
Sbjct: 3 LAVIGKSEFVTGFRLAGIRKV-------YEIVDVPSS----ESAVKSVLEDKSIGILVMH 51
Query: 72 ----QNVAELIRHCIDDHTQPIPAVL 93
N+ E++R +++ QP L
Sbjct: 52 NDDISNLPEILRRNLNESVQPTVVAL 77
>sp|Q12WL2|VATF_METBU V-type ATP synthase subunit F OS=Methanococcoides burtonii
(strain DSM 6242) GN=atpF PE=3 SV=1
Length = 99
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 16/86 (18%)
Query: 12 LAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDVDIILIN 71
LAV+G + GF L GI +I + + ++E K +K DV I +I+
Sbjct: 3 LAVVGSSEFVTGFRLAGIKKIYEAKS------------DELESVVTKVLKDSDVGIFVIH 50
Query: 72 QN----VAELIRHCIDDHTQPIPAVL 93
++ + E++R + + P L
Sbjct: 51 EDDFNKLPEILRDTLSESVDPTVVTL 76
>sp|Q895H1|MIAB_CLOTE (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Clostridium tetani (strain Massachusetts / E88)
GN=miaB PE=3 SV=1
Length = 453
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 17/79 (21%)
Query: 44 DKNTSVSDIEEAFRKFIKRDDVDIILINQNV-------------AELIRHCIDDHTQPIP 90
+++ VSDIE+ ++ +K +I L+ QNV AEL+RH + + I
Sbjct: 188 ERSREVSDIEKEIKELVKSGYKEITLLGQNVNSYGKDLEPKVSFAELLRHV--NEIEGIE 245
Query: 91 AVLEIPSKDHPYDASKDSI 109
V + S HP D ++D I
Sbjct: 246 RVRFMTS--HPKDLTEDVI 262
>sp|Q57671|VATF_METJA V-type ATP synthase subunit F OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 /
NBRC 100440) GN=atpF PE=3 SV=1
Length = 98
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Query: 12 LAVIGDEDTCVGFLLGGIGEINKHRQPNFLVVDKNTSVSDIEEAFRKFIKRDDVDIILIN 71
+ V+GD +T +GF L G+ ++ + V + +V I E +++ I+I
Sbjct: 3 VGVVGDRETAIGFRLAGLTDV-------YEVKNDEEAVKAINE----LANNENIAFIIIT 51
Query: 72 QNVAELIRHCIDDHTQPIPAVLEIPSK 98
+ +AE I+ + + + ++EIP K
Sbjct: 52 ERIAESIKDKLKNINK---VIVEIPDK 75
>sp|Q6L0S6|DNAJ_PICTO Chaperone protein DnaJ OS=Picrophilus torridus (strain ATCC 700027
/ DSM 9790 / JCM 10055 / NBRC 100828) GN=dnaJ PE=3 SV=1
Length = 357
Score = 29.3 bits (64), Expect = 7.8, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 41 LVVDKNTSVSDIEEAFRKFIKRDDVDIILINQNVAELIRHCIDDHTQPIPAVLEIPSKDH 100
L VD+N S DI++AFR+ K+ D N+ E + + + VL P K
Sbjct: 9 LGVDRNASQDDIKKAFRELAKKYHPDANPGNKEAEEKFKEIAEAY-----EVLSDPQKRK 63
Query: 101 PYDAS 105
YD +
Sbjct: 64 QYDET 68
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.140 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,877,004
Number of Sequences: 539616
Number of extensions: 1614779
Number of successful extensions: 5238
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 5194
Number of HSP's gapped (non-prelim): 67
length of query: 114
length of database: 191,569,459
effective HSP length: 82
effective length of query: 32
effective length of database: 147,320,947
effective search space: 4714270304
effective search space used: 4714270304
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)