Query psy6441
Match_columns 464
No_of_seqs 469 out of 3017
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 18:00:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6441.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6441hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 3.1E-27 1E-31 216.5 12.5 154 89-244 6-162 (169)
2 1yyh_A HN1;, notch 1, ankyrin 99.9 7.4E-27 2.5E-31 224.2 13.1 212 28-240 6-245 (253)
3 1oy3_D Transcription factor in 99.9 4.5E-26 1.5E-30 219.3 15.5 206 28-255 5-261 (282)
4 1k1a_A B-cell lymphoma 3-encod 99.9 4.5E-26 1.5E-30 214.6 14.7 211 28-239 5-237 (241)
5 2rfa_A Transient receptor pote 99.9 3.7E-26 1.3E-30 215.1 11.7 195 32-248 3-227 (232)
6 4gpm_A Engineered protein OR26 99.9 1.6E-25 5.5E-30 205.0 14.3 122 83-206 33-157 (169)
7 3b7b_A Euchromatic histone-lys 99.9 8.4E-25 2.9E-29 206.1 18.5 208 28-236 7-228 (237)
8 4b93_B Ankyrin repeat domain-c 99.9 1.2E-25 4E-30 220.1 12.7 200 29-230 8-230 (269)
9 3aji_A 26S proteasome non-ATPa 99.9 2.7E-25 9.1E-30 208.7 14.6 206 32-239 6-226 (231)
10 2rfm_A Putative ankyrin repeat 99.9 1.6E-25 5.3E-30 205.7 12.2 157 82-240 30-189 (192)
11 1oy3_D Transcription factor in 99.9 3.5E-25 1.2E-29 213.1 15.1 94 84-179 6-102 (282)
12 2xai_A ASB-9, ankyrin repeat a 99.9 2.4E-25 8.1E-30 215.0 13.7 192 31-248 2-196 (261)
13 2dzn_A Probable 26S proteasome 99.9 5.6E-25 1.9E-29 205.7 15.8 183 33-238 3-194 (228)
14 3ljn_A Hypothetical protein; a 99.9 1.6E-25 5.5E-30 225.5 12.7 220 22-243 11-269 (364)
15 1ikn_D Protein (I-kappa-B-alph 99.9 2.9E-25 9.8E-30 210.1 13.5 197 29-245 5-211 (236)
16 3ljn_A Hypothetical protein; a 99.9 1.1E-25 3.7E-30 226.8 10.8 211 28-240 49-311 (364)
17 2f8y_A Notch homolog 1, transl 99.9 6.8E-25 2.3E-29 204.8 15.4 192 29-243 22-216 (223)
18 3v31_A Ankyrin repeat family A 99.9 3.5E-25 1.2E-29 198.6 11.8 153 86-240 2-157 (167)
19 2pnn_A Transient receptor pote 99.9 8.5E-26 2.9E-30 218.7 8.1 200 29-243 10-258 (273)
20 3d9h_A CDNA FLJ77766, highly s 99.9 6.5E-25 2.2E-29 215.3 14.5 168 84-256 89-259 (285)
21 3twr_A Tankyrase-2; ankyrin re 99.9 6.8E-25 2.3E-29 196.3 13.0 156 84-241 5-163 (165)
22 3aji_A 26S proteasome non-ATPa 99.9 2.1E-24 7.1E-29 202.6 16.3 163 84-248 37-202 (231)
23 3f6q_A Integrin-linked protein 99.9 1.8E-24 6.3E-29 196.6 14.7 162 85-247 3-167 (179)
24 2etb_A Transient receptor pote 99.9 1.4E-25 4.7E-30 214.9 7.5 197 32-243 2-246 (256)
25 3jxi_A Vanilloid receptor-rela 99.9 2.2E-25 7.6E-30 213.6 8.9 201 32-247 5-254 (260)
26 3d9h_A CDNA FLJ77766, highly s 99.9 2.6E-24 8.9E-29 211.0 16.0 211 23-240 51-275 (285)
27 1ihb_A P18-INK4C(INK6), cyclin 99.9 4.5E-25 1.6E-29 196.2 9.4 154 86-242 4-161 (162)
28 2dzn_A Probable 26S proteasome 99.9 4.3E-24 1.5E-28 199.7 16.5 170 58-229 32-219 (228)
29 1wdy_A 2-5A-dependent ribonucl 99.9 6.9E-24 2.4E-28 203.2 18.0 207 32-239 5-240 (285)
30 2y1l_E Darpin-8.4; hydrolase-i 99.9 9.9E-25 3.4E-29 196.8 11.3 154 85-240 12-168 (169)
31 1yyh_A HN1;, notch 1, ankyrin 99.9 1.3E-24 4.6E-29 208.5 12.4 163 84-248 54-220 (253)
32 3b7b_A Euchromatic histone-lys 99.9 7.5E-24 2.6E-28 199.5 17.0 188 59-248 8-207 (237)
33 1wdy_A 2-5A-dependent ribonucl 99.9 6.6E-24 2.2E-28 203.3 16.9 217 29-247 36-282 (285)
34 3v30_A DNA-binding protein rfx 99.9 9.7E-25 3.3E-29 196.6 9.5 155 87-242 2-159 (172)
35 3utm_A Tankyrase-1; tankyrase, 99.9 6.1E-24 2.1E-28 210.0 16.0 217 31-248 23-310 (351)
36 1s70_B 130 kDa myosin-binding 99.9 9.1E-24 3.1E-28 205.8 16.9 184 30-236 38-283 (299)
37 1k1a_A B-cell lymphoma 3-encod 99.9 8E-24 2.7E-28 199.2 15.9 186 61-248 8-213 (241)
38 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.8E-24 6.1E-29 191.5 10.6 151 87-240 2-155 (156)
39 2rfa_A Transient receptor pote 99.9 5.1E-24 1.7E-28 200.4 14.1 158 86-244 2-184 (232)
40 1n11_A Ankyrin; clathrin, BAND 99.9 6E-24 2.1E-28 218.9 16.0 215 32-248 146-374 (437)
41 3hra_A Ankyrin repeat family p 99.9 4.5E-24 1.5E-28 196.1 13.1 155 84-240 36-200 (201)
42 3aaa_C Myotrophin, protein V-1 99.9 2.9E-24 1E-28 183.7 10.9 118 85-204 5-122 (123)
43 1awc_B Protein (GA binding pro 99.9 2E-24 6.9E-29 191.4 10.0 147 88-237 3-152 (153)
44 2f8y_A Notch homolog 1, transl 99.9 7.5E-24 2.6E-28 197.7 14.3 163 84-248 22-188 (223)
45 1n11_A Ankyrin; clathrin, BAND 99.9 1E-23 3.4E-28 217.3 16.2 218 28-247 10-241 (437)
46 2xai_A ASB-9, ankyrin repeat a 99.9 8.9E-24 3E-28 203.9 14.7 174 28-204 32-216 (261)
47 3v30_A DNA-binding protein rfx 99.9 1.7E-24 5.7E-29 195.1 8.9 121 83-205 32-155 (172)
48 2rfm_A Putative ankyrin repeat 99.9 1.3E-23 4.4E-28 192.8 14.2 154 28-205 31-187 (192)
49 3twr_A Tankyrase-2; ankyrin re 99.9 1.5E-23 5.1E-28 187.5 14.2 155 30-207 6-162 (165)
50 3c5r_A BARD-1, BRCA1-associate 99.9 7.5E-24 2.6E-28 184.3 11.6 120 83-204 6-125 (137)
51 2fo1_E LIN-12 protein; beta-ba 99.9 5.7E-24 2E-28 216.6 12.1 212 30-242 123-370 (373)
52 1awc_B Protein (GA binding pro 99.9 1.6E-23 5.6E-28 185.5 13.1 148 32-204 2-152 (153)
53 1s70_B 130 kDa myosin-binding 99.9 1.8E-23 6.1E-28 203.8 14.4 109 86-196 39-147 (299)
54 1ikn_D Protein (I-kappa-B-alph 99.9 6.7E-24 2.3E-28 200.7 11.0 165 83-248 4-181 (236)
55 4b93_B Ankyrin repeat domain-c 99.9 1.9E-23 6.7E-28 204.3 14.6 169 85-256 50-222 (269)
56 4g8k_A 2-5A-dependent ribonucl 99.9 2.2E-23 7.7E-28 207.7 15.2 210 31-246 58-329 (337)
57 3utm_A Tankyrase-1; tankyrase, 99.9 4.6E-23 1.6E-27 203.7 17.3 208 28-241 54-332 (351)
58 3kea_A K1L; tropism, ANK repea 99.9 8.2E-24 2.8E-28 207.7 11.0 159 86-247 61-224 (285)
59 4hbd_A KN motif and ankyrin re 99.9 1.5E-23 5.2E-28 205.1 12.3 158 82-241 106-273 (276)
60 2y1l_E Darpin-8.4; hydrolase-i 99.9 4.6E-23 1.6E-27 185.9 14.4 154 29-206 11-167 (169)
61 1d9s_A Cyclin-dependent kinase 99.9 7.1E-24 2.4E-28 184.7 8.6 120 83-205 8-131 (136)
62 3v31_A Ankyrin repeat family A 99.9 2.3E-23 8E-28 186.6 11.7 149 32-204 3-154 (167)
63 1bi7_B P16INK4A, MTS1, multipl 99.9 6.5E-24 2.2E-28 189.2 7.6 138 83-223 8-149 (156)
64 3kea_A K1L; tropism, ANK repea 99.9 6.2E-24 2.1E-28 208.6 7.3 162 82-248 26-191 (285)
65 1ihb_A P18-INK4C(INK6), cyclin 99.9 3.4E-23 1.2E-27 184.0 11.2 149 32-205 5-157 (162)
66 3eu9_A Huntingtin-interacting 99.9 4.9E-23 1.7E-27 192.6 12.9 210 31-242 8-234 (240)
67 4g8k_A 2-5A-dependent ribonucl 99.9 1.5E-22 5.1E-27 201.7 17.0 214 30-245 23-300 (337)
68 2jab_A H10-2-G3; HER2, darpin, 99.9 1.9E-23 6.5E-28 182.0 9.2 119 85-205 12-133 (136)
69 3hra_A Ankyrin repeat family p 99.9 7.7E-23 2.6E-27 187.8 13.4 163 85-248 3-175 (201)
70 2fo1_E LIN-12 protein; beta-ba 99.9 5.8E-24 2E-28 216.5 6.5 161 85-247 164-342 (373)
71 3f6q_A Integrin-linked protein 99.9 1.8E-22 6.3E-27 183.3 15.3 120 84-205 36-158 (179)
72 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.6E-22 5.4E-27 178.9 13.5 149 32-205 2-153 (156)
73 1ycs_B 53BP2, P53BP2; ankyrin 99.9 4.6E-23 1.6E-27 196.8 9.5 157 86-245 4-166 (239)
74 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.5E-22 5.2E-27 171.2 11.5 118 86-205 1-121 (126)
75 3t8k_A Uncharacterized protein 99.9 1.3E-22 4.5E-27 188.2 11.9 149 87-239 6-175 (186)
76 2etb_A Transient receptor pote 99.9 2.6E-23 8.9E-28 199.0 6.4 157 87-244 2-207 (256)
77 3ui2_A Signal recognition part 99.9 6.2E-23 2.1E-27 197.2 8.0 139 86-240 44-182 (244)
78 3deo_A Signal recognition part 99.9 6.2E-23 2.1E-27 187.9 7.2 138 85-238 42-179 (183)
79 2vge_A RELA-associated inhibit 99.9 7.1E-24 2.4E-28 202.5 0.7 185 29-236 18-206 (229)
80 2vge_A RELA-associated inhibit 99.9 7.6E-23 2.6E-27 195.3 6.9 141 85-227 19-165 (229)
81 3eu9_A Huntingtin-interacting 99.9 1.2E-21 4.1E-26 183.2 14.9 184 63-248 10-207 (240)
82 1sw6_A Regulatory protein SWI6 99.9 1.2E-22 4.1E-27 203.4 8.3 182 67-256 102-320 (327)
83 3ehr_A Osteoclast-stimulating 99.9 2E-22 6.9E-27 189.3 9.3 121 82-204 68-189 (222)
84 4hbd_A KN motif and ankyrin re 99.9 4.5E-22 1.5E-26 194.6 11.7 122 84-207 142-272 (276)
85 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.5E-22 8.4E-27 191.8 9.4 151 29-204 2-158 (239)
86 3t8k_A Uncharacterized protein 99.9 1.7E-22 5.9E-27 187.5 6.4 119 85-205 36-174 (186)
87 3jxi_A Vanilloid receptor-rela 99.9 2.3E-22 7.8E-27 192.6 7.0 161 30-205 44-245 (260)
88 2pnn_A Transient receptor pote 99.9 5E-22 1.7E-26 192.1 9.3 161 29-207 51-255 (273)
89 1bi7_B P16INK4A, MTS1, multipl 99.8 1.7E-21 5.8E-26 173.5 8.4 142 29-195 9-151 (156)
90 1n0q_A 3ANK, 3 ankyrin repeats 99.8 4.7E-21 1.6E-25 156.1 9.0 93 86-180 1-93 (93)
91 1sw6_A Regulatory protein SWI6 99.8 3.8E-21 1.3E-25 192.5 9.3 113 84-196 161-324 (327)
92 2l6b_A NR1C; ankyrin, consensu 99.8 2.2E-21 7.4E-26 163.6 4.6 109 82-192 4-112 (115)
93 1d9s_A Cyclin-dependent kinase 99.8 4.4E-21 1.5E-25 167.0 6.1 130 111-242 2-135 (136)
94 3c5r_A BARD-1, BRCA1-associate 99.8 1.5E-20 5.1E-25 163.3 9.1 125 111-237 1-128 (137)
95 2b0o_E UPLC1; arfgap, structur 99.8 8.8E-21 3E-25 188.8 8.5 135 88-230 152-298 (301)
96 2jab_A H10-2-G3; HER2, darpin, 99.8 1.9E-19 6.7E-24 156.5 11.8 123 117-240 10-135 (136)
97 3jue_A Arfgap with coiled-coil 99.8 1.1E-19 3.7E-24 186.5 11.3 118 86-205 198-321 (368)
98 3lvq_E ARF-GAP with SH3 domain 99.8 5.7E-20 2E-24 194.7 9.5 117 88-206 133-261 (497)
99 1dcq_A PYK2-associated protein 99.8 2.5E-19 8.7E-24 176.1 10.6 115 89-205 132-258 (278)
100 3aaa_C Myotrophin, protein V-1 99.8 4.5E-19 1.5E-23 151.3 10.3 110 118-228 4-116 (123)
101 3deo_A Signal recognition part 99.8 2.7E-19 9.3E-24 163.6 8.9 132 92-226 5-151 (183)
102 2aja_A Ankyrin repeat family p 99.8 1.1E-20 3.9E-25 194.3 -0.7 155 78-242 83-249 (376)
103 1n0r_A 4ANK, 4 ankyrin repeats 99.8 7.5E-19 2.6E-23 148.3 10.5 122 120-242 1-125 (126)
104 1n0q_A 3ANK, 3 ankyrin repeats 99.8 8E-19 2.7E-23 142.8 9.8 85 120-205 1-88 (93)
105 3ehr_A Osteoclast-stimulating 99.8 2.2E-19 7.4E-24 168.5 6.7 161 85-247 23-202 (222)
106 2b0o_E UPLC1; arfgap, structur 99.8 4.1E-19 1.4E-23 176.7 7.0 106 84-197 187-295 (301)
107 3ui2_A Signal recognition part 99.8 8E-19 2.7E-23 168.5 8.1 136 85-226 13-152 (244)
108 3lvq_E ARF-GAP with SH3 domain 99.7 1.2E-17 4.2E-22 176.8 11.0 105 84-196 168-275 (497)
109 2l6b_A NR1C; ankyrin, consensu 99.7 7E-18 2.4E-22 142.0 6.7 91 116-207 4-97 (115)
110 1dcq_A PYK2-associated protein 99.7 7.4E-18 2.5E-22 165.7 7.4 95 84-180 166-263 (278)
111 2zgd_A 3 repeat synthetic anky 99.7 3.6E-17 1.2E-21 137.6 10.5 91 113-204 16-109 (110)
112 2zgd_A 3 repeat synthetic anky 99.7 2E-17 6.9E-22 139.2 6.6 91 82-174 19-109 (110)
113 2aja_A Ankyrin repeat family p 99.7 3.3E-18 1.1E-22 175.9 -1.9 123 64-196 94-233 (376)
114 3jue_A Arfgap with coiled-coil 99.6 1E-15 3.4E-20 157.0 11.4 126 116-241 194-324 (368)
115 1y29_A Huwentoxin-X; A double- 45.7 7.3 0.00025 24.0 1.0 15 427-441 8-22 (28)
116 1j8c_A Ubiquitin-like protein 39.6 28 0.00094 29.3 4.1 58 322-384 45-104 (125)
117 1ryj_A Unknown; beta/alpha pro 38.7 8.9 0.0003 28.9 0.8 61 310-382 5-65 (70)
118 2l76_A Nfatc2-interacting prot 37.1 17 0.00058 29.5 2.3 76 300-384 16-93 (95)
119 1yqb_A Ubiquilin 3; structural 36.1 33 0.0011 27.4 4.0 73 309-388 24-98 (100)
120 2npt_A Dual specificity mitoge 34.9 8.2 0.00028 31.2 0.0 40 302-344 11-50 (106)
121 1wx7_A Ubiquilin 3; ubiquitin- 34.8 44 0.0015 26.8 4.5 70 309-385 19-90 (106)
122 2jxx_A Nfatc2-interacting prot 30.5 12 0.00042 30.3 0.4 80 294-381 14-96 (97)
123 2l32_A Small archaeal modifier 27.4 29 0.00098 26.5 2.0 51 320-383 12-62 (74)
124 3a4r_A Nfatc2-interacting prot 25.7 17 0.00058 28.0 0.4 74 300-381 2-78 (79)
125 4hcn_B Polyubiquitin, ubiquiti 24.8 33 0.0011 27.1 2.0 69 309-383 24-94 (98)
126 3k63_A Conserved hypothetical 24.3 23 0.00079 29.4 1.0 27 433-461 96-123 (126)
127 3kyd_D Small ubiquitin-related 23.1 28 0.00095 29.2 1.3 57 323-384 55-113 (115)
128 2p1m_A SKP1-like protein 1A; F 23.0 33 0.0011 30.0 1.8 44 317-361 87-142 (160)
129 3uf8_A Ubiquitin-like protein 21.5 37 0.0013 31.1 1.9 76 302-384 18-93 (209)
130 2d07_B Ubiquitin-like protein 20.5 45 0.0015 26.4 1.9 72 304-384 16-90 (93)
131 3tei_B Ribosomal protein S6 ki 20.1 31 0.0011 20.5 0.6 12 353-364 14-25 (26)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.94 E-value=3.1e-27 Score=216.46 Aligned_cols=154 Identities=26% Similarity=0.256 Sum_probs=127.4
Q ss_pred cchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCH
Q psy6441 89 GSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQK 168 (464)
Q Consensus 89 TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~ 168 (464)
++|+.||+.|+.++|+.|++. |++++.+|..|+||||+|+..++.+++++|+++|++++.++. .|+||||+|+..|+.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~-Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~-~g~TpLh~A~~~g~~ 83 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIEN-GADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDS-DGRTPLHHAAENGHK 83 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhcc-CCCCHHHHHHHcCCH
Confidence 358889999999999999988 899999999999999999999999999999999999998854 899999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhCCCCC
Q psy6441 169 DIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSNQNRT 244 (464)
Q Consensus 169 eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn~~~~ 244 (464)
+++++|+++|+++|.+|.+|+||||+|+ +.+++++|...+......+..+.||+++|...++.++.++|+++++..
T Consensus 84 ~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 84 EVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred HHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 9999999999999999999999999986 567777774443333455677889999999889999999888776543
No 2
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.94 E-value=7.4e-27 Score=224.24 Aligned_cols=212 Identities=19% Similarity=0.126 Sum_probs=147.8
Q ss_pred cCCChHhHHHHHHHhc-------------CCCCHHHHHHhcCC----chhhhccchhHHHHhhhHHHHHHHhc-------
Q psy6441 28 TELTYYSLLNICCKEL-------------NIDSPQTILKIRKL----PNTIIRKDKDVARLTMFQEIELVLSQ------- 83 (464)
Q Consensus 28 ~~l~~~~lL~i~c~~~-------------~i~~~~~l~~~~~l----~~~~~~~~~~~a~l~~~~ei~~ll~~------- 83 (464)
.+..+.++|++|+..+ ..+.++.+...... .+....+..+.+...+..++...+.+
T Consensus 6 ~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 85 (253)
T 1yyh_A 6 RGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANI 85 (253)
T ss_dssp ----------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 4566888999988755 45444444443322 23344566777777666665554433
Q ss_pred -CCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHH
Q psy6441 84 -MPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWA 162 (464)
Q Consensus 84 -~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~A 162 (464)
+..|.||||+|+..|+.+++++|++....+++..+..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|
T Consensus 86 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A 164 (253)
T 1yyh_A 86 QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDD-LGKSALHWA 164 (253)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCT-TSCBHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCC-CCCCHHHHH
Confidence 257889999999999999999999983348889999999999999999999999999999999999854 899999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHh
Q psy6441 163 AKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVS 239 (464)
Q Consensus 163 a~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~s 239 (464)
+..|+.+++++|+++|++++.+|..|+||||+|+ +.+++++|...+......+..+.||+++|...++.++..++..
T Consensus 165 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~ 244 (253)
T 1yyh_A 165 AAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDL 244 (253)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999999999999999999996 5577777754433334556778899999999999999998874
Q ss_pred C
Q psy6441 240 N 240 (464)
Q Consensus 240 n 240 (464)
.
T Consensus 245 ~ 245 (253)
T 1yyh_A 245 E 245 (253)
T ss_dssp -
T ss_pred H
Confidence 3
No 3
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.93 E-value=4.5e-26 Score=219.26 Aligned_cols=206 Identities=15% Similarity=0.053 Sum_probs=131.8
Q ss_pred cCCChHhHHHHHHHhcCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHHHHhcCCCCCcchhhhhhcCChhhhhcch
Q psy6441 28 TELTYYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLSQMPDGHGSIVNGMENTHLNSARLPF 107 (464)
Q Consensus 28 ~~l~~~~lL~i~c~~~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~ll~~~~~g~TpLh~Aa~~G~~~iVk~LL 107 (464)
.+-.+.++|++||.....+.++.+.....-+. .+...+..|.||||+|+..|+.+++++|+
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-------------------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 65 (282)
T 1oy3_D 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHE-------------------YLDLQNDLGQTALHLAAILGEASTVEKLY 65 (282)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSG-------------------GGGCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc-------------------cccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 34567899999999988876666655332211 01223456777777777777777777777
Q ss_pred hhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCC-----------------------------------------
Q psy6441 108 SVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGID----------------------------------------- 146 (464)
Q Consensus 108 ~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gad----------------------------------------- 146 (464)
+. |++++..+..|+||||+|+..|+.+++++|+++|++
T Consensus 66 ~~-ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (282)
T 1oy3_D 66 AA-GAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRD 144 (282)
T ss_dssp HT-TCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------C
T ss_pred Hc-CCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhh
Confidence 76 777777777777777777777777777777766544
Q ss_pred ------cccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CCchhHhhc---cHHHHHHHhCCCCCcccCCC
Q psy6441 147 ------INAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSK-EETPLALAT---KPEVRILLGGEPGVTINTAD 216 (464)
Q Consensus 147 ------vn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~-G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~ 216 (464)
++.++ ..|+||||+|+..|+.+++++|+++|++++.++.. |+||||+|+ +.+++++|...+......+.
T Consensus 145 ~~~~~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~ 223 (282)
T 1oy3_D 145 EDWRLQLEAEN-YDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMY 223 (282)
T ss_dssp CCGGGGTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred hhhhhcCCCcC-CCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccc
Confidence 45553 36777777777777777777777777777776643 777777774 44566665433332244455
Q ss_pred CCCCcccccCCCCcHHHHHHHHhCCCCCCCCCCCCCCCC
Q psy6441 217 LPIVPNYIKNEPLDPRVNDYQVSNQNRTHQTNPVTANQN 255 (464)
Q Consensus 217 ~~~tpl~laa~~~h~a~~~~l~sn~~~~~~~~p~~~~~p 255 (464)
.+.||+++|...++..+.++|+.++.....+. ..+.+|
T Consensus 224 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~tp 261 (282)
T 1oy3_D 224 GGRTPLGSALLRPNPILARLLRAHGAPEPEDG-GDKLSP 261 (282)
T ss_dssp TSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC-------
T ss_pred CCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCC-Cccccc
Confidence 66677777777777777777777766655555 334444
No 4
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.93 E-value=4.5e-26 Score=214.65 Aligned_cols=211 Identities=16% Similarity=0.079 Sum_probs=164.2
Q ss_pred cCCChHhHHHHHHHhcCCCCHHHHHHh-------cCCchhhhccchhHHHHhhhHHHHHHHhc--------CCCCCcchh
Q psy6441 28 TELTYYSLLNICCKELNIDSPQTILKI-------RKLPNTIIRKDKDVARLTMFQEIELVLSQ--------MPDGHGSIV 92 (464)
Q Consensus 28 ~~l~~~~lL~i~c~~~~i~~~~~l~~~-------~~l~~~~~~~~~~~a~l~~~~ei~~ll~~--------~~~g~TpLh 92 (464)
.+-.+.++|++||....++.++.+... ....+....+..+.+...+..++...+.+ +..|.||||
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 84 (241)
T 1k1a_A 5 ADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAH 84 (241)
T ss_dssp --CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 345678999999999998877776651 12333445567777777766666554443 357889999
Q ss_pred hhhhcCChhhhhcchhhcCC----CcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCH
Q psy6441 93 NGMENTHLNSARLPFSVLGV----SDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQK 168 (464)
Q Consensus 93 ~Aa~~G~~~iVk~LL~~~ga----~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~ 168 (464)
+|+..|+.+++++|++. +. +++..+..|+||||+|+..|+.+++++|+++|++++..+...|+||||+|+..|+.
T Consensus 85 ~A~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~ 163 (241)
T 1k1a_A 85 LACEHRSPTCLRALLDS-AAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSL 163 (241)
T ss_dssp HHHHTTCHHHHHHHHHH-SCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCH
T ss_pred HHHHcCCHHHHHHHHHc-CCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCH
Confidence 99999999999999988 65 78888889999999999999999999999999999988645899999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHh
Q psy6441 169 DIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVS 239 (464)
Q Consensus 169 eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~s 239 (464)
+++++|+++|++++.+|..|+||||+|+ +.+++++|...+......+..+.||+++|...++.++.+.+.+
T Consensus 164 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~ 237 (241)
T 1k1a_A 164 SMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKAT 237 (241)
T ss_dssp HHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC---
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhcc
Confidence 9999999999999999999999999996 4577777744333334456678899999998888888776553
No 5
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.93 E-value=3.7e-26 Score=215.06 Aligned_cols=195 Identities=18% Similarity=0.170 Sum_probs=156.9
Q ss_pred hHhHHHHHHHhcCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHHHHhcCCCCCcchhhhhhcCChhhhhcchhhcC
Q psy6441 32 YYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLSQMPDGHGSIVNGMENTHLNSARLPFSVLG 111 (464)
Q Consensus 32 ~~~lL~i~c~~~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~ll~~~~~g~TpLh~Aa~~G~~~iVk~LL~~~g 111 (464)
++++|+.|+....++.++.+....... +...+..|+||||+|+..|+.+++++|++. |
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~---------------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-~ 60 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCE---------------------VHQRGAMGETALHIAALYDNLEAAMVLMEA-A 60 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSC---------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-C
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCC---------------------cccCCCCCCCHHHHHHHcCCHHHHHHHHHc-C
Confidence 567888888888776555554421100 112357899999999999999999999999 8
Q ss_pred CCc-----ccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccC------------CCCCcHHHHHHHcCCHHHHHHH
Q psy6441 112 VSD-----MDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHD------------MNGWTALHWAAKRGQKDIVSYL 174 (464)
Q Consensus 112 a~~-----~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd------------~~G~TpLH~Aa~~G~~eiv~lL 174 (464)
+++ +..|..|+||||+|+..|+.+++++|+++|++++..+. ..|+||||+|+..|+.+++++|
T Consensus 61 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 140 (232)
T 2rfa_A 61 PELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLL 140 (232)
T ss_dssp GGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHH
T ss_pred chhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 876 66778999999999999999999999999999998743 2699999999999999999999
Q ss_pred HHCCCCCCCCCCCCCchhHhhc---cHHHH----HHHh-CCCCCc-----ccCCCCCCCcccccCCCCcHHHHHHHHhCC
Q psy6441 175 LKHGADKSLLTSKEETPLALAT---KPEVR----ILLG-GEPGVT-----INTADLPIVPNYIKNEPLDPRVNDYQVSNQ 241 (464)
Q Consensus 175 L~~GAdin~~D~~G~TPLh~A~---~~~i~----~LL~-~~~~~~-----~~~~~~~~tpl~laa~~~h~a~~~~l~sn~ 241 (464)
+++|++++.+|..|+||||+|+ +.+++ ++|. .+.... ...+..+.||+++|+..++..+.++|++++
T Consensus 141 l~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g 220 (232)
T 2rfa_A 141 IEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKR 220 (232)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 9999999999999999999996 34544 6663 333332 456778999999999999999999999876
Q ss_pred CCCCCCC
Q psy6441 242 NRTHQTN 248 (464)
Q Consensus 242 ~~~~~~~ 248 (464)
.....+.
T Consensus 221 ~~~~~~~ 227 (232)
T 2rfa_A 221 KHIAAAH 227 (232)
T ss_dssp HHC----
T ss_pred ccchhhh
Confidence 5544433
No 6
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.93 E-value=1.6e-25 Score=205.01 Aligned_cols=122 Identities=35% Similarity=0.433 Sum_probs=115.8
Q ss_pred cCCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHH
Q psy6441 83 QMPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWA 162 (464)
Q Consensus 83 ~~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~A 162 (464)
.+..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++|+++|.+|. +|+||||+|
T Consensus 33 ~d~~g~t~l~~a~~~~~~~~~~~ll~~-gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~-~G~TpLh~A 110 (169)
T 4gpm_A 33 SDSDGRTPLHHAAENGHKEVVKLLISK-GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDS-DGRTPLHHA 110 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhc-ccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCC-CCCCHHHHH
Confidence 357899999999999999999999999 999999999999999999999999999999999999999965 999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhC
Q psy6441 163 AKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGG 206 (464)
Q Consensus 163 a~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~ 206 (464)
+..|+.+++++|+++|++++.+|..|+||||+|+ +.+++++|..
T Consensus 111 ~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 157 (169)
T 4gpm_A 111 AENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEK 157 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999999999999999999996 6788888843
No 7
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.93 E-value=8.4e-25 Score=206.07 Aligned_cols=208 Identities=17% Similarity=0.073 Sum_probs=162.6
Q ss_pred cCCChHhHHHHHHHhcCCCCHHHHHHhcC---CchhhhccchhHHHHhhhHHHHHHHhc--------CCCCCcchhhhhh
Q psy6441 28 TELTYYSLLNICCKELNIDSPQTILKIRK---LPNTIIRKDKDVARLTMFQEIELVLSQ--------MPDGHGSIVNGME 96 (464)
Q Consensus 28 ~~l~~~~lL~i~c~~~~i~~~~~l~~~~~---l~~~~~~~~~~~a~l~~~~ei~~ll~~--------~~~g~TpLh~Aa~ 96 (464)
.+..+.++++.|+....++.++.+..... .......+..+.+...+..++...+.+ +..|.||||+|+.
T Consensus 7 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 86 (237)
T 3b7b_A 7 EHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAK 86 (237)
T ss_dssp SSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Confidence 45667899999999999987777776543 222334466777777666665554433 2568889999999
Q ss_pred cCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy6441 97 NTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLK 176 (464)
Q Consensus 97 ~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~ 176 (464)
.|+.+++++|++....+++..+..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|++
T Consensus 87 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~ 165 (237)
T 3b7b_A 87 KGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDN-EENICLHWAAFSGCVDIAEILLA 165 (237)
T ss_dssp TTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHCCHHHHHHHHT
T ss_pred cCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCC-CCCCHHHHHHHCCCHHHHHHHHH
Confidence 99999999999883388888888899999999999999999999999999988854 88999999999999999999999
Q ss_pred CCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHH
Q psy6441 177 HGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDY 236 (464)
Q Consensus 177 ~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~ 236 (464)
+|++++.+|..|+||||+|+ +.+++++|...+......+..|.||+++|....+......
T Consensus 166 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~ 228 (237)
T 3b7b_A 166 AKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQ 228 (237)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHH
T ss_pred cCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999985 5577777754444335556778899999988888754443
No 8
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.93 E-value=1.2e-25 Score=220.11 Aligned_cols=200 Identities=17% Similarity=0.078 Sum_probs=150.9
Q ss_pred CCChHhHHHHHHHhcCCCCHHHHHHhcCCch-----------hhhccchhHHHH-hhhHHH-HHHHh-------cCCCCC
Q psy6441 29 ELTYYSLLNICCKELNIDSPQTILKIRKLPN-----------TIIRKDKDVARL-TMFQEI-ELVLS-------QMPDGH 88 (464)
Q Consensus 29 ~l~~~~lL~i~c~~~~i~~~~~l~~~~~l~~-----------~~~~~~~~~a~l-~~~~ei-~~ll~-------~~~~g~ 88 (464)
+....++|..||..+.++.++.++....... .......+.+.. .....+ ..++. .+.+|+
T Consensus 8 d~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~ 87 (269)
T 4b93_B 8 DYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGS 87 (269)
T ss_dssp CCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSC
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCC
Confidence 4455678999999999887777765432111 111122222222 112222 22222 346899
Q ss_pred cchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCH
Q psy6441 89 GSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQK 168 (464)
Q Consensus 89 TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~ 168 (464)
||||+|+..|+.++|++|++. |++++..+..|.||||+|+..++.+++++|++.|+++|.+|. .|+||||+||..|+.
T Consensus 88 TpLh~A~~~g~~~~v~~Ll~~-~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~-~g~TpL~~A~~~g~~ 165 (269)
T 4b93_B 88 SPLHVAALHGRADLIPLLLKH-GANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDL-SGNTPLIYACSGGHH 165 (269)
T ss_dssp CHHHHHHHTTCTTHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-TCCCHHHHHHHTTCG
T ss_pred CHHHHHHHcCcHHHHHHHHhc-CCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHCCCH
Confidence 999999999999999999998 999999999999999999999999999999999999999954 999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCc
Q psy6441 169 DIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLD 230 (464)
Q Consensus 169 eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h 230 (464)
+++++|+++|+|+|.+|..|+||||+|+ +.+++++|...+......+..|.||+++|+...+
T Consensus 166 ~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 166 ELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp GGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred HHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence 9999999999999999999999999996 5678888754433334566788999999988776
No 9
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.93 E-value=2.7e-25 Score=208.71 Aligned_cols=206 Identities=17% Similarity=0.077 Sum_probs=127.6
Q ss_pred hHhHHHHHHHhcCCCCHHHHHHhcC----CchhhhccchhHHHHhhhHHHHHHHhc--------CCCCCcchhhhhhcCC
Q psy6441 32 YYSLLNICCKELNIDSPQTILKIRK----LPNTIIRKDKDVARLTMFQEIELVLSQ--------MPDGHGSIVNGMENTH 99 (464)
Q Consensus 32 ~~~lL~i~c~~~~i~~~~~l~~~~~----l~~~~~~~~~~~a~l~~~~ei~~ll~~--------~~~g~TpLh~Aa~~G~ 99 (464)
...+++.|+..+.++.++.+..... ..+....+..+.+...+..++...+.+ +..|.||||+|+..|+
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 85 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGX 85 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTC
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCH
Confidence 4567888888888876666655332 122233344555555444444333322 2456677777777777
Q ss_pred hhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Q psy6441 100 LNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGA 179 (464)
Q Consensus 100 ~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GA 179 (464)
.+++++|++. |++++..+..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|+
T Consensus 86 ~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~ 163 (231)
T 3aji_A 86 DEIVKALLVK-GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDH-YDATAMHRAAAKGNLKMVHILLFYKA 163 (231)
T ss_dssp HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHcCCHHHHHHHHhcCC
Confidence 7777777766 667766666677777777777777777777777777766643 66777777777777777777777777
Q ss_pred CCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHh
Q psy6441 180 DKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVS 239 (464)
Q Consensus 180 din~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~s 239 (464)
+++.+|..|+||||+|+ +.+++++|...+......+..+.||+++|....+..+.+++..
T Consensus 164 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~ 226 (231)
T 3aji_A 164 STNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEG 226 (231)
T ss_dssp CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHH
T ss_pred CccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcc
Confidence 77777777777777764 3455555533322223445556677776666666666665543
No 10
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.92 E-value=1.6e-25 Score=205.67 Aligned_cols=157 Identities=17% Similarity=0.048 Sum_probs=142.2
Q ss_pred hcCCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHH
Q psy6441 82 SQMPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHW 161 (464)
Q Consensus 82 ~~~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~ 161 (464)
..+..|.||||+|+..|+.+++++|++. |++++..+..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+
T Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~ 107 (192)
T 2rfm_A 30 YRDSYNRTPLMVACMLGMENAIDKLVEN-FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDF-SGKTPLMW 107 (192)
T ss_dssp CCCTTCCCHHHHHHHHTCGGGHHHHHHH-HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-TSCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHh-ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHH
Confidence 4567999999999999999999999999 999999999999999999999999999999999999999955 99999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHH
Q psy6441 162 AAKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQV 238 (464)
Q Consensus 162 Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~ 238 (464)
|+..|+.+++++|+++|++++.+|..|+||||+|+ +.+++++|...+......+..+.||+++|...++..+.++|.
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 187 (192)
T 2rfm_A 108 SIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFT 187 (192)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 99999999999999999999999999999999996 567887775443333455678889999999999999999887
Q ss_pred hC
Q psy6441 239 SN 240 (464)
Q Consensus 239 sn 240 (464)
+.
T Consensus 188 ~~ 189 (192)
T 2rfm_A 188 EV 189 (192)
T ss_dssp HH
T ss_pred hc
Confidence 54
No 11
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.92 E-value=3.5e-25 Score=213.06 Aligned_cols=94 Identities=19% Similarity=0.187 Sum_probs=51.6
Q ss_pred CCCCCcchhhhhhcCChhhhhcchhhcCCC---cccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHH
Q psy6441 84 MPDGHGSIVNGMENTHLNSARLPFSVLGVS---DMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALH 160 (464)
Q Consensus 84 ~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~---~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH 160 (464)
+.+|+||||+|+..|+.++|++|++. |++ ++.++..|+||||+|+..|+.+++++|+++|++++.++. .|+||||
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~tpL~ 83 (282)
T 1oy3_D 6 TEDGDTALHLAVIHQHEPFLDFLLGF-SAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAER-GGHTALH 83 (282)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHH-HTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT-TSCCHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhc-CCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHH
Confidence 34555555555555555555555555 444 445555555555555555555555555555555555532 5555555
Q ss_pred HHHHcCCHHHHHHHHHCCC
Q psy6441 161 WAAKRGQKDIVSYLLKHGA 179 (464)
Q Consensus 161 ~Aa~~G~~eiv~lLL~~GA 179 (464)
+|+..|+.+++++|+++|+
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~ 102 (282)
T 1oy3_D 84 LACRVRAHTCACVLLQPRP 102 (282)
T ss_dssp HHTTTTCHHHHHHHSSSCC
T ss_pred HHHHcCCcchhHhhhccCC
Confidence 5555555555555555543
No 12
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.92 E-value=2.4e-25 Score=214.98 Aligned_cols=192 Identities=17% Similarity=0.135 Sum_probs=154.9
Q ss_pred ChHhHHHHHHHhcCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHHHHhcCCCCCcchhhhhhcCChhhhhcchhhc
Q psy6441 31 TYYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLSQMPDGHGSIVNGMENTHLNSARLPFSVL 110 (464)
Q Consensus 31 ~~~~lL~i~c~~~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~ll~~~~~g~TpLh~Aa~~G~~~iVk~LL~~~ 110 (464)
++.++++.|+.....+.++.+.....-. ...+.+|.||||+|+..|+.+++++|++.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~----------------------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~- 58 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAV----------------------NIITADHVSPLHEACLGGHLSCVKILLKH- 58 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCS----------------------SCCCTTCCCHHHHHHHHTCHHHHHHHHHT-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCC----------------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHC-
Confidence 5678899999888887666555432111 12346899999999999999999999998
Q ss_pred CCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc
Q psy6441 111 GVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKEET 190 (464)
Q Consensus 111 ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~T 190 (464)
|++++..|..|+||||+|+..|+.+++++|+++|++++.. + .|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus 59 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 136 (261)
T 2xai_A 59 GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPE-S-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGT 136 (261)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCS-C-TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBC
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-C-CCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCC
Confidence 9999999999999999999999999999999999999865 3 6999999999999999999999999999999999999
Q ss_pred hhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhCCCCCCCCC
Q psy6441 191 PLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSNQNRTHQTN 248 (464)
Q Consensus 191 PLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn~~~~~~~~ 248 (464)
|||+|+ +.+++++|... +++.+.+..+.||+++|+..++.++.++|+..+.....+.
T Consensus 137 ~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d 196 (261)
T 2xai_A 137 PLYLACENQQRACVKKLLES-GADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKN 196 (261)
T ss_dssp HHHHHHHTTCHHHHHHHHHH-TCCTTCCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHHHhCCHHHHHHHHHc-CCCCCCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 999996 55777776332 2232346778899999999999999999998877666555
No 13
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.92 E-value=5.6e-25 Score=205.73 Aligned_cols=183 Identities=19% Similarity=0.132 Sum_probs=88.1
Q ss_pred HhHHHHHHHhcCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHHHHhcCCCCCcchhhhhhcCChhhhhcchhhcC-
Q psy6441 33 YSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLSQMPDGHGSIVNGMENTHLNSARLPFSVLG- 111 (464)
Q Consensus 33 ~~lL~i~c~~~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~ll~~~~~g~TpLh~Aa~~G~~~iVk~LL~~~g- 111 (464)
.++++.||.....+.++.+........ ...+..|.||||+|+..|+.+++++|++. |
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~---------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~ 60 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLL---------------------LQKDQDGRIPLHWSVSFQAHEITSFLLSK-ME 60 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGT---------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-CT
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCcccc---------------------ccCCCCCCCHHHHHHHcCCHHHHHHHHhc-cc
Confidence 467888888888776666554332110 01233445555555555555555555544 4
Q ss_pred -CCccc-ccchhhhHHHHHHhcCCHHHHHHHHHCC--CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Q psy6441 112 -VSDMD-RVKYLEEQLREASCLGDFEAVCELVSKG--IDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSK 187 (464)
Q Consensus 112 -a~~~~-~d~~G~TpLh~Aa~~G~~eiVk~LL~~G--advn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~ 187 (464)
.+++. .+..|+||||+|+..|+.+++++|+++| ++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..
T Consensus 61 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 139 (228)
T 2dzn_A 61 NVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITN-QGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKF 139 (228)
T ss_dssp TCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT
T ss_pred cccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCc-CCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCC
Confidence 33333 3444455555555555555555555544 44444422 4555555555555555555555555555555555
Q ss_pred CCchhHhhc---cHHHHHHHhCCC-CCcccCCCCCCCcccccCCCCcHHHHHHHH
Q psy6441 188 EETPLALAT---KPEVRILLGGEP-GVTINTADLPIVPNYIKNEPLDPRVNDYQV 238 (464)
Q Consensus 188 G~TPLh~A~---~~~i~~LL~~~~-~~~~~~~~~~~tpl~laa~~~h~a~~~~l~ 238 (464)
|+||||+|+ +.+++++|...+ ......+..+.||+++|...++..+.++|+
T Consensus 140 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 194 (228)
T 2dzn_A 140 NQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLV 194 (228)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 555555543 234444443322 111223344445555555445555444444
No 14
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.92 E-value=1.6e-25 Score=225.53 Aligned_cols=220 Identities=11% Similarity=0.037 Sum_probs=182.2
Q ss_pred hhcccccCCChHhHHHHHHHhcCCCCHHHHHHhcC---CchhhhccchhHHHHhhhHHHHHHHhcC------CCCCcchh
Q psy6441 22 IELNRLTELTYYSLLNICCKELNIDSPQTILKIRK---LPNTIIRKDKDVARLTMFQEIELVLSQM------PDGHGSIV 92 (464)
Q Consensus 22 vei~rl~~l~~~~lL~i~c~~~~i~~~~~l~~~~~---l~~~~~~~~~~~a~l~~~~ei~~ll~~~------~~g~TpLh 92 (464)
++... .+..+.++|++|+....++.++.+..... ..+....+.++.+...+..++..++... .+|.||||
T Consensus 11 ~~~~~-~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~ 89 (364)
T 3ljn_A 11 LNRIK-SDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIH 89 (364)
T ss_dssp ------CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHH
T ss_pred CCccc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHH
Confidence 34444 45668999999999999998888887542 3344456778888888777776665442 38999999
Q ss_pred hhhhcCChhhhhcchhhc---CCCccc-----------------ccchhhhHHHHHHhcC--CHHHHHHHHHCCCCcccc
Q psy6441 93 NGMENTHLNSARLPFSVL---GVSDMD-----------------RVKYLEEQLREASCLG--DFEAVCELVSKGIDINAQ 150 (464)
Q Consensus 93 ~Aa~~G~~~iVk~LL~~~---ga~~~~-----------------~d~~G~TpLh~Aa~~G--~~eiVk~LL~~Gadvn~~ 150 (464)
+|+..|+.+++++|++.. |++++. .+..|+||||+|+..| +.+++++|+++|++++.+
T Consensus 90 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~ 169 (364)
T 3ljn_A 90 LAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAK 169 (364)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCC
T ss_pred HHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCccc
Confidence 999999999999999862 555555 8889999999999999 999999999999999999
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-----CCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcc
Q psy6441 151 HDMNGWTALHWAAKRGQKDIVSYLLKHGAD-----KSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPN 222 (464)
Q Consensus 151 dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAd-----in~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl 222 (464)
+. .|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+ +.+++++|...+......+..+.||+
T Consensus 170 d~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL 248 (364)
T 3ljn_A 170 DK-ADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPL 248 (364)
T ss_dssp CT-TSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHH
T ss_pred CC-CCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 54 999999999999999999999999999 9999999999999996 56888888554444455677899999
Q ss_pred cccCCCCcHHHHHHHHhCCCC
Q psy6441 223 YIKNEPLDPRVNDYQVSNQNR 243 (464)
Q Consensus 223 ~laa~~~h~a~~~~l~sn~~~ 243 (464)
++|+..++..++++|+.++..
T Consensus 249 ~~A~~~g~~~~v~~Ll~~~~~ 269 (364)
T 3ljn_A 249 YLSVRAAMVLLTKELLQKTDV 269 (364)
T ss_dssp HHHHHTCCHHHHHHHHHHSCH
T ss_pred HHHHHhChHHHHHHHHHcCCc
Confidence 999999999999999977544
No 15
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.92 E-value=2.9e-25 Score=210.12 Aligned_cols=197 Identities=18% Similarity=0.077 Sum_probs=160.8
Q ss_pred CCChHhHHHHHHHhcCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHHHHhcCCCCCcchhhhhhcCChhhhhcchh
Q psy6441 29 ELTYYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLSQMPDGHGSIVNGMENTHLNSARLPFS 108 (464)
Q Consensus 29 ~l~~~~lL~i~c~~~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~ll~~~~~g~TpLh~Aa~~G~~~iVk~LL~ 108 (464)
+..+.++|++|+.....+.++.+....... . ..+...+..|.||||+|+..|+.+++++|++
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~------~------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 66 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGD------L------------AFLNFQNNLQQTPLHLAVITNQPEIAEALLG 66 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----------C------------CCCCCCCTTCCCHHHHHHHTTCHHHHHCCCS
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhcc------H------------HHhhccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 345778999999888876443332211000 0 0112335689999999999999999999999
Q ss_pred hcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCC------cccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy6441 109 VLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGID------INAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKS 182 (464)
Q Consensus 109 ~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gad------vn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin 182 (464)
. |++++..+..|+||||+|+..|+.+++++|++.|++ ++.. +..|+||||+|+..|+.+++++|+++|++++
T Consensus 67 ~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 144 (236)
T 1ikn_D 67 A-GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKAT-NYNGHTCLHLASIHGYLGIVELLVSLGADVN 144 (236)
T ss_dssp C-CCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCC-CTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred c-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhcc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9 999999999999999999999999999999999976 4555 4489999999999999999999999999999
Q ss_pred CCCC-CCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhCCCCCC
Q psy6441 183 LLTS-KEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSNQNRTH 245 (464)
Q Consensus 183 ~~D~-~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn~~~~~ 245 (464)
.++. .|+||||+|+ +.+++++|...+......+..+.||+++|...++..+.++|++++..+.
T Consensus 145 ~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 145 AQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp CCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 9998 9999999996 5688888865544445567789999999999999999999998876544
No 16
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.92 E-value=1.1e-25 Score=226.84 Aligned_cols=211 Identities=15% Similarity=0.126 Sum_probs=175.1
Q ss_pred cCCChHhHHHHHHHhcCCCCHHHHHHhcCCchh-hhccchhHHHHhhhHHHHHHHh------------------------
Q psy6441 28 TELTYYSLLNICCKELNIDSPQTILKIRKLPNT-IIRKDKDVARLTMFQEIELVLS------------------------ 82 (464)
Q Consensus 28 ~~l~~~~lL~i~c~~~~i~~~~~l~~~~~l~~~-~~~~~~~~a~l~~~~ei~~ll~------------------------ 82 (464)
.+..+.++|++|+.....+.++.+......... ...+..+.+...+..++...+.
T Consensus 49 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~ 128 (364)
T 3ljn_A 49 QNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNE 128 (364)
T ss_dssp CCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEE
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhh
Confidence 455678999999999999988888876654433 4567778887777666654443
Q ss_pred -----cCCCCCcchhhhhhcC--ChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCC-----cccc
Q psy6441 83 -----QMPDGHGSIVNGMENT--HLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGID-----INAQ 150 (464)
Q Consensus 83 -----~~~~g~TpLh~Aa~~G--~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gad-----vn~~ 150 (464)
.+..|.||||+|+..| +.++|++|++. |++++..|..|+||||+|+..|+.+++++|+++|++ ++.+
T Consensus 129 ~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~-ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 207 (364)
T 3ljn_A 129 IGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL-GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYA 207 (364)
T ss_dssp ETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCC
T ss_pred hccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccc
Confidence 3347999999999999 99999999999 999999999999999999999999999999999999 9998
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCC------------cccCC
Q psy6441 151 HDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGV------------TINTA 215 (464)
Q Consensus 151 dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~------------~~~~~ 215 (464)
+. .|+||||+|+..|+.+++++|+++|+|++.+|..|+||||+|+ +.+++++|...+.. ....+
T Consensus 208 ~~-~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~ 286 (364)
T 3ljn_A 208 NK-QGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPD 286 (364)
T ss_dssp CT-TCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGG
T ss_pred CC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCccccccc
Confidence 55 9999999999999999999999999999999999999999996 56888887433211 12244
Q ss_pred CCCCCcccccCCCCcHHHHHHHHhC
Q psy6441 216 DLPIVPNYIKNEPLDPRVNDYQVSN 240 (464)
Q Consensus 216 ~~~~tpl~laa~~~h~a~~~~l~sn 240 (464)
..+++|++.++..++......++..
T Consensus 287 ~~~~~~l~~aa~~~~~~~v~~ll~~ 311 (364)
T 3ljn_A 287 RVVWLDFVPAAADPSKQEVLQLLQE 311 (364)
T ss_dssp GCCCCTTSCSSCCHHHHHHHHHHHH
T ss_pred ccccccchhhhhccCHHHHHHHHHH
Confidence 5677888889988888766665533
No 17
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.92 E-value=6.8e-25 Score=204.80 Aligned_cols=192 Identities=22% Similarity=0.186 Sum_probs=161.9
Q ss_pred CCChHhHHHHHHHhcCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHHHHhcCCCCCcchhhhhhcCChhhhhcchh
Q psy6441 29 ELTYYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLSQMPDGHGSIVNGMENTHLNSARLPFS 108 (464)
Q Consensus 29 ~l~~~~lL~i~c~~~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~ll~~~~~g~TpLh~Aa~~G~~~iVk~LL~ 108 (464)
+..+.++++.|+.....+.++.+.....-+ ...+..|.||||+|+..|+.+++++|++
T Consensus 22 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~----------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 79 (223)
T 2f8y_A 22 DRTGETALHLAARYSRSDAAKRLLEASADA----------------------NIQDNMGRTPLHAAVSADAQGVFQILIR 79 (223)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCT----------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHcCCCC----------------------CCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 456788999999998887666655432111 1235689999999999999999999999
Q ss_pred hcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Q psy6441 109 VLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKE 188 (464)
Q Consensus 109 ~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G 188 (464)
....+++..+..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 80 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 158 (223)
T 2f8y_A 80 NRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDD-LGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNRE 158 (223)
T ss_dssp BTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT-TSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred cCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 84448999999999999999999999999999999999999954 99999999999999999999999999999999999
Q ss_pred CchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhCCCC
Q psy6441 189 ETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSNQNR 243 (464)
Q Consensus 189 ~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn~~~ 243 (464)
+||||+|+ +.+++++|...+......+..+.||+++|....+..+.++|...+..
T Consensus 159 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 159 ETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred cCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 99999996 56777777444333345567788999999999999999999977654
No 18
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.92 E-value=3.5e-25 Score=198.56 Aligned_cols=153 Identities=18% Similarity=0.026 Sum_probs=138.4
Q ss_pred CCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHc
Q psy6441 86 DGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKR 165 (464)
Q Consensus 86 ~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~ 165 (464)
.|.||||.|+..|+.+++++|++. +.+++..|..|+||||+|+..|+.+++++|+++|++++..+. .|+||||+|+..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~ 79 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGK-GRESALSLACSK 79 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHc-CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHc
Confidence 689999999999999999999999 999999999999999999999999999999999999999954 999999999999
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhC
Q psy6441 166 GQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSN 240 (464)
Q Consensus 166 G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn 240 (464)
|+.+++++|+++|++++.+|..|+||||+|+ +.+++++|...+......+..+.||+++|...++..+.+++.++
T Consensus 80 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (167)
T 3v31_A 80 GYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESH 157 (167)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHH
Confidence 9999999999999999999999999999996 56788877544333345667788999999999999999988765
No 19
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.92 E-value=8.5e-26 Score=218.66 Aligned_cols=200 Identities=18% Similarity=0.112 Sum_probs=158.5
Q ss_pred CCChHhHHHHHHHhcCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHHHHhcCCCCCcchhhhhhc---CChhhhhc
Q psy6441 29 ELTYYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLSQMPDGHGSIVNGMEN---THLNSARL 105 (464)
Q Consensus 29 ~l~~~~lL~i~c~~~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~ll~~~~~g~TpLh~Aa~~---G~~~iVk~ 105 (464)
+..+.++|+.|+....++.++.+.....-...... ......+..|.||||+|+.. |+.++|++
T Consensus 10 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~--------------~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~ 75 (273)
T 2pnn_A 10 RLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLT--------------DSEFKDPETGKTCLLKAMLNLHNGQNDTIAL 75 (273)
T ss_dssp -CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTT--------------SGGGSCTTTCCCHHHHHHHSCBTTBCHHHHH
T ss_pred CcccchHHHHHHHcCCHHHHHHHHHHHhhcccccC--------------CcccccCcCCCCHHHHHHHHHhcCChHHHHH
Confidence 34678999999999999877666542110000000 00112357899999999986 99999999
Q ss_pred chhhcCCCc-----------ccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccC-------------CCCCcHHHH
Q psy6441 106 PFSVLGVSD-----------MDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHD-------------MNGWTALHW 161 (464)
Q Consensus 106 LL~~~ga~~-----------~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd-------------~~G~TpLH~ 161 (464)
|++. |++. ...|..|+||||+|+..|+.+++++|+++|++++.++. ..|+||||+
T Consensus 76 Ll~~-ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~ 154 (273)
T 2pnn_A 76 LLDV-ARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSL 154 (273)
T ss_dssp HHHH-HHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHH
T ss_pred HHHh-hccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHH
Confidence 9998 6542 22567899999999999999999999999999999854 269999999
Q ss_pred HHHcCCHHHHHHHHH---CCCCCCCCCCCCCchhHhhcc------------HHHHHHHhC-CCCCc------ccCCCCCC
Q psy6441 162 AAKRGQKDIVSYLLK---HGADKSLLTSKEETPLALATK------------PEVRILLGG-EPGVT------INTADLPI 219 (464)
Q Consensus 162 Aa~~G~~eiv~lLL~---~GAdin~~D~~G~TPLh~A~~------------~~i~~LL~~-~~~~~------~~~~~~~~ 219 (464)
|+..|+.+++++|++ +|++++.+|..|+||||+|+. .+++++|.. +...+ ...+..+.
T Consensus 155 A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~ 234 (273)
T 2pnn_A 155 AACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGL 234 (273)
T ss_dssp HHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSC
T ss_pred HHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCC
Confidence 999999999999999 999999999999999999974 567776632 22221 23677889
Q ss_pred CcccccCCCCcHHHHHHHHhCCCC
Q psy6441 220 VPNYIKNEPLDPRVNDYQVSNQNR 243 (464)
Q Consensus 220 tpl~laa~~~h~a~~~~l~sn~~~ 243 (464)
||+++|+..++..++++|++++..
T Consensus 235 TpL~~A~~~g~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 235 TPLALAASSGKIGVLAYILQREIH 258 (273)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred CHHHHHHHhChHHHHHHHHHCCCC
Confidence 999999999999999999988874
No 20
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.92 E-value=6.5e-25 Score=215.33 Aligned_cols=168 Identities=18% Similarity=0.188 Sum_probs=137.2
Q ss_pred CCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHH
Q psy6441 84 MPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAA 163 (464)
Q Consensus 84 ~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa 163 (464)
+.+|.||||+|+..|+.+++++|++. |++++..|..|+||||+|+..|+.+++++|+++|++++.. + .|+||||+|+
T Consensus 89 ~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~-~g~t~L~~A~ 165 (285)
T 3d9h_A 89 TADHVSPLHEACLGGHLSCVKILLKH-GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPE-S-DLASPIHEAA 165 (285)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHT-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCS-C-TTSCHHHHHH
T ss_pred CCCCCCHHHHHHHCCcHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCC-C-CCCCHHHHHH
Confidence 46788999999999999999999988 8999999999999999999999999999999999988865 3 5899999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhC
Q psy6441 164 KRGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSN 240 (464)
Q Consensus 164 ~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn 240 (464)
..|+.+++++|+++|++++.+|..|+||||+|+ +.+++++|... +++...+..+.||+++|+...+..+.++|+..
T Consensus 166 ~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 244 (285)
T 3d9h_A 166 RRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLES-GADVNQGKGQDSPLHAVVRTASEELACLLMDF 244 (285)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBTTBCHHHHHHHTTCHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 999999999999999999999999999999996 55777776433 23333466788999999999999999998888
Q ss_pred CCCCCCCCCCCCCCCc
Q psy6441 241 QNRTHQTNPVTANQNV 256 (464)
Q Consensus 241 ~~~~~~~~p~~~~~p~ 256 (464)
+.....+. ..+.+|.
T Consensus 245 gad~~~~d-~~g~t~l 259 (285)
T 3d9h_A 245 GADTQAKN-AEGKRPV 259 (285)
T ss_dssp TCCTTCCC-TTSCCGG
T ss_pred CCCCCCcC-CCCCCHH
Confidence 76665555 3344433
No 21
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.92 E-value=6.8e-25 Score=196.28 Aligned_cols=156 Identities=20% Similarity=0.200 Sum_probs=128.4
Q ss_pred CCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHH
Q psy6441 84 MPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAA 163 (464)
Q Consensus 84 ~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa 163 (464)
+.+|.|+||.|+..|+.++++.|++..+.+++..+..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~ 83 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDK-GGLVPLHNAC 83 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCC-CCCCHHHHHH
Confidence 346778899999999999999999876778888888889999999999999999999999999998854 8999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhC
Q psy6441 164 KRGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSN 240 (464)
Q Consensus 164 ~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn 240 (464)
..|+.+++++|+++|++++.+|..|+||||+|+ +.+++++|...+......+..+.||++++.. .+..+.++|..+
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~ 162 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGD 162 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC
T ss_pred HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhc
Confidence 999999999999999999999999999999986 5677777754433335566778899988776 888888888765
Q ss_pred C
Q psy6441 241 Q 241 (464)
Q Consensus 241 ~ 241 (464)
+
T Consensus 163 g 163 (165)
T 3twr_A 163 A 163 (165)
T ss_dssp -
T ss_pred c
Confidence 4
No 22
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.92 E-value=2.1e-24 Score=202.58 Aligned_cols=163 Identities=21% Similarity=0.184 Sum_probs=147.0
Q ss_pred CCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHH
Q psy6441 84 MPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAA 163 (464)
Q Consensus 84 ~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa 163 (464)
+..|.||||+|+..|+.+++++|++. |++++..|..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+
T Consensus 37 ~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~ 114 (231)
T 3aji_A 37 DQDSRTALHWACSAGHTEIVEFLLQL-GVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQ-NGCTPLHYAA 114 (231)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHh-CCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCC-CCCCHHHHHH
Confidence 57899999999999999999999999 999999999999999999999999999999999999999954 9999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhC
Q psy6441 164 KRGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSN 240 (464)
Q Consensus 164 ~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn 240 (464)
..|+.+++++|+++|++++.+|..|.||||+|+ +.+++++|...+......+..+.||+++|....+..+.++|+++
T Consensus 115 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 194 (231)
T 3aji_A 115 SKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQ 194 (231)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHC
Confidence 999999999999999999999999999999996 56777777544433345567888999999999999999999988
Q ss_pred CCCCCCCC
Q psy6441 241 QNRTHQTN 248 (464)
Q Consensus 241 ~~~~~~~~ 248 (464)
+.....+.
T Consensus 195 ga~~~~~~ 202 (231)
T 3aji_A 195 GASIYIEN 202 (231)
T ss_dssp TCCSCCCC
T ss_pred CCCCCCCC
Confidence 77665544
No 23
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.92 E-value=1.8e-24 Score=196.58 Aligned_cols=162 Identities=20% Similarity=0.150 Sum_probs=136.7
Q ss_pred CCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHH
Q psy6441 85 PDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAK 164 (464)
Q Consensus 85 ~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~ 164 (464)
.++.++||.|+..|+.+++++|++..+.+++..+..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNR-GDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHH
Confidence 46788999999999999999999987788999999999999999999999999999999999999854 89999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhCC
Q psy6441 165 RGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSNQ 241 (464)
Q Consensus 165 ~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn~ 241 (464)
.|+.+++++|+++|++++.+|..|+||||+|+ +.+++++|...+......+..+.||+++|....+..+.+++...+
T Consensus 82 ~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g 161 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMG 161 (179)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999996 567777775444434556777889999999988989999988776
Q ss_pred CCCCCC
Q psy6441 242 NRTHQT 247 (464)
Q Consensus 242 ~~~~~~ 247 (464)
......
T Consensus 162 ~~~~~~ 167 (179)
T 3f6q_A 162 QNLNRI 167 (179)
T ss_dssp CCCSCB
T ss_pred cCcccC
Confidence 665443
No 24
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.92 E-value=1.4e-25 Score=214.90 Aligned_cols=197 Identities=15% Similarity=0.035 Sum_probs=154.3
Q ss_pred hHhHHHHHHHhcCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHHHHhcCCCCCcchhhhhhc---CChhhhhcchh
Q psy6441 32 YYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLSQMPDGHGSIVNGMEN---THLNSARLPFS 108 (464)
Q Consensus 32 ~~~lL~i~c~~~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~ll~~~~~g~TpLh~Aa~~---G~~~iVk~LL~ 108 (464)
++++|+.|+....++.++.+.+.. .....++.. .....+..|.||||+|+.. |+.+++++|++
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l------~~~g~~i~~--------~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~ 67 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYL------RWNSKYLTD--------SAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQ 67 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHH------HHHTCCTTS--------GGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHH
T ss_pred CccHHHHHHHcCCHHHHHHHHHHH------HHcCCCccc--------ccccCCCCCCCHHHHHHHccccchHHHHHHHHh
Confidence 468899999998887554333310 000000000 0012467999999999999 99999999999
Q ss_pred hcCCCccc-----------ccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCC------------CCCcHHHHHHHc
Q psy6441 109 VLGVSDMD-----------RVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDM------------NGWTALHWAAKR 165 (464)
Q Consensus 109 ~~ga~~~~-----------~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~------------~G~TpLH~Aa~~ 165 (464)
. |++++. .|..|+||||+|+..|+.+++++|+++|++++.++.. .|+||||+|+..
T Consensus 68 ~-g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~ 146 (256)
T 2etb_A 68 I-DKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACT 146 (256)
T ss_dssp H-HHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHT
T ss_pred c-CCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHc
Confidence 8 777653 3478999999999999999999999999999998652 299999999999
Q ss_pred CCHHHHHHHHH---CCCCCCCCCCCCCchhHhhcc-----HH-------HHHHHhCC-CCCc------ccCCCCCCCccc
Q psy6441 166 GQKDIVSYLLK---HGADKSLLTSKEETPLALATK-----PE-------VRILLGGE-PGVT------INTADLPIVPNY 223 (464)
Q Consensus 166 G~~eiv~lLL~---~GAdin~~D~~G~TPLh~A~~-----~~-------i~~LL~~~-~~~~------~~~~~~~~tpl~ 223 (464)
|+.+++++|++ +|++++.+|..|+||||+|+. .+ ++++|... .+.. ...+..+.||++
T Consensus 147 ~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~ 226 (256)
T 2etb_A 147 KQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLK 226 (256)
T ss_dssp TCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHH
T ss_pred CCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHH
Confidence 99999999999 999999999999999999963 34 77777432 2221 456778899999
Q ss_pred ccCCCCcHHHHHHHHhCCCC
Q psy6441 224 IKNEPLDPRVNDYQVSNQNR 243 (464)
Q Consensus 224 laa~~~h~a~~~~l~sn~~~ 243 (464)
+|+..++..+.++|++++..
T Consensus 227 ~A~~~g~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 227 LAAKEGKIEIFRHILQREFS 246 (256)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHhCCCC
Confidence 99999999999999876543
No 25
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.92 E-value=2.2e-25 Score=213.58 Aligned_cols=201 Identities=16% Similarity=0.065 Sum_probs=155.5
Q ss_pred hHhHHHHHHHhcCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHHHHhcCCCCCcchhhhh---hcCChhhhhcchh
Q psy6441 32 YYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLSQMPDGHGSIVNGM---ENTHLNSARLPFS 108 (464)
Q Consensus 32 ~~~lL~i~c~~~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~ll~~~~~g~TpLh~Aa---~~G~~~iVk~LL~ 108 (464)
.+++++.|++.+.++.++.+.... ........ . .....+..|.||||+|+ ..|+.+++++|++
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~l------~~~~~~~~----~----~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~ 70 (260)
T 3jxi_A 5 NRPILFDIVSRGSPDGLEGLLSFL------LTHKKRLT----D----EEFREPSTGKTCLPKALLNLSAGRNDTIPILLD 70 (260)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHH------HHHTCCTT----S----GGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHH
T ss_pred hHHHHHHHHHhCCHHHHHHHHHHH------HhcCCCcc----h----hhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHH
Confidence 467889999998887655444310 00000000 0 00122367999999998 7899999999999
Q ss_pred hcCC-----------CcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccC-------------CCCCcHHHHHHH
Q psy6441 109 VLGV-----------SDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHD-------------MNGWTALHWAAK 164 (464)
Q Consensus 109 ~~ga-----------~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd-------------~~G~TpLH~Aa~ 164 (464)
. |+ ..+..|..|+||||+|+..|+.++|++|+++|++++.++. ..|+||||+|+.
T Consensus 71 ~-g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~ 149 (260)
T 3jxi_A 71 I-AEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAAC 149 (260)
T ss_dssp H-HHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHH
T ss_pred h-cccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHH
Confidence 7 53 3455566999999999999999999999999999999863 479999999999
Q ss_pred cCCHHHHHHHHH---CCCCCCCCCCCCCchhHhhcc------------HHHHHHHhCC-CCCc------ccCCCCCCCcc
Q psy6441 165 RGQKDIVSYLLK---HGADKSLLTSKEETPLALATK------------PEVRILLGGE-PGVT------INTADLPIVPN 222 (464)
Q Consensus 165 ~G~~eiv~lLL~---~GAdin~~D~~G~TPLh~A~~------------~~i~~LL~~~-~~~~------~~~~~~~~tpl 222 (464)
.|+.+++++|++ +|++++.+|..|+||||+|+. .+++++|... .... ...+..+.||+
T Consensus 150 ~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL 229 (260)
T 3jxi_A 150 TNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPL 229 (260)
T ss_dssp TTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHH
T ss_pred cCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHH
Confidence 999999999999 999999999999999999972 3677766322 2221 34677889999
Q ss_pred cccCCCCcHHHHHHHHhCCCCCCCC
Q psy6441 223 YIKNEPLDPRVNDYQVSNQNRTHQT 247 (464)
Q Consensus 223 ~laa~~~h~a~~~~l~sn~~~~~~~ 247 (464)
++|+..++..++++|++++..+...
T Consensus 230 ~~A~~~g~~~~v~~Ll~~g~~~~~~ 254 (260)
T 3jxi_A 230 MMAAKTGKIGIFQHIIRREIADAAA 254 (260)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHcCCHHHHHHHHHhCCCcccc
Confidence 9999999999999999876554443
No 26
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.91 E-value=2.6e-24 Score=211.04 Aligned_cols=211 Identities=18% Similarity=0.123 Sum_probs=174.4
Q ss_pred hcccccCCChHhHHHHHHHhcCCCCHHHHHHhcC---CchhhhccchhHHHHhhhHHHHHHHhc--------CCCCCcch
Q psy6441 23 ELNRLTELTYYSLLNICCKELNIDSPQTILKIRK---LPNTIIRKDKDVARLTMFQEIELVLSQ--------MPDGHGSI 91 (464)
Q Consensus 23 ei~rl~~l~~~~lL~i~c~~~~i~~~~~l~~~~~---l~~~~~~~~~~~a~l~~~~ei~~ll~~--------~~~g~TpL 91 (464)
++.. .+..+.++|++|+.....+.++.+..... ..+....+..+.+...+..++...+.+ +..|.|||
T Consensus 51 ~~~~-~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L 129 (285)
T 3d9h_A 51 PLMG-DAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPL 129 (285)
T ss_dssp TTCS-SSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHH
T ss_pred cccC-CCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 3444 56778999999999999988887777542 233445677888888777776655543 36799999
Q ss_pred hhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHH
Q psy6441 92 VNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIV 171 (464)
Q Consensus 92 h~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv 171 (464)
|+|+..|+.+++++|++. |++++..+ .|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++
T Consensus 130 ~~A~~~~~~~~v~~Ll~~-g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~~~~~~v 206 (285)
T 3d9h_A 130 FNACVSGSWDCVNLLLQH-GASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKIS-HLGTPLYLACENQQRACV 206 (285)
T ss_dssp HHHHHHTCHHHHHHHHHT-TCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBT-TTBCHHHHHHHTTCHHHH
T ss_pred HHHHHcCHHHHHHHHHHC-CCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcCcHHHH
Confidence 999999999999999999 99987655 599999999999999999999999999999965 999999999999999999
Q ss_pred HHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhC
Q psy6441 172 SYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSN 240 (464)
Q Consensus 172 ~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn 240 (464)
++|+++|++++. |..|+||||+|+ +.+++++|...+......+..+.||++++.. +..+.+.|+..
T Consensus 207 ~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~--~~~~~~~Ll~~ 275 (285)
T 3d9h_A 207 KKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPP--ESPLAQLFLER 275 (285)
T ss_dssp HHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT--TSHHHHHHHHH
T ss_pred HHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcC--ccHHHHHHHHh
Confidence 999999999995 899999999996 5688888855444345567788999999995 34666777755
No 27
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.91 E-value=4.5e-25 Score=196.22 Aligned_cols=154 Identities=16% Similarity=0.125 Sum_probs=136.7
Q ss_pred CCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHc
Q psy6441 86 DGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKR 165 (464)
Q Consensus 86 ~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~ 165 (464)
...||||.|+..|+.+++++|++. |++++..+..|+||||+|+. |+.+++++|+++|++++.++. .|+||||+|+..
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~ 80 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQN-NVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDR-TGFAVIHDAARA 80 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTS-CCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhC-CCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHc
Confidence 466899999999999999999998 99999999999999999999 999999999999999999854 999999999999
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCC-cccCCCCCCCcccccCCCCcHHHHHHHHhCC
Q psy6441 166 GQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGV-TINTADLPIVPNYIKNEPLDPRVNDYQVSNQ 241 (464)
Q Consensus 166 G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~-~~~~~~~~~tpl~laa~~~h~a~~~~l~sn~ 241 (464)
|+.+++++|+++|++++.+|..|+||||+|+ +.+++++|...+.. ....+..+.||+++|...++..+.++|++++
T Consensus 81 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 160 (162)
T 1ihb_A 81 GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 160 (162)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence 9999999999999999999999999999996 56788777443333 3556677889999999999999999998776
Q ss_pred C
Q psy6441 242 N 242 (464)
Q Consensus 242 ~ 242 (464)
+
T Consensus 161 A 161 (162)
T 1ihb_A 161 A 161 (162)
T ss_dssp -
T ss_pred C
Confidence 4
No 28
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.91 E-value=4.3e-24 Score=199.70 Aligned_cols=170 Identities=15% Similarity=0.007 Sum_probs=140.8
Q ss_pred chhhhccchhHHHHhhhHHHHHHHhc-----------CCCCCcchhhhhhcCChhhhhcchhhcC--CCcccccchhhhH
Q psy6441 58 PNTIIRKDKDVARLTMFQEIELVLSQ-----------MPDGHGSIVNGMENTHLNSARLPFSVLG--VSDMDRVKYLEEQ 124 (464)
Q Consensus 58 ~~~~~~~~~~~a~l~~~~ei~~ll~~-----------~~~g~TpLh~Aa~~G~~~iVk~LL~~~g--a~~~~~d~~G~Tp 124 (464)
.+....+..+.+...+..++...+.+ +..|.||||+|+..|+.+++++|++. | ++++..+..|+||
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~g~t~ 110 (228)
T 2dzn_A 32 KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDR-PLKPDLNKITNQGVTC 110 (228)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSS-SSCCCTTCCCTTCCCH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCcccccCCcCCCCH
Confidence 44455677777777666555544432 25789999999999999999999998 7 8889999999999
Q ss_pred HHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCchhHhhc---cHHH
Q psy6441 125 LREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHG-ADKSLLTSKEETPLALAT---KPEV 200 (464)
Q Consensus 125 Lh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~G-Adin~~D~~G~TPLh~A~---~~~i 200 (464)
||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+ +.++
T Consensus 111 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~ 189 (228)
T 2dzn_A 111 LHLAVGKKWFEVSQFLIENGASVRIKDK-FNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDA 189 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHhHHHHHHHcCCCccccCC-CCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHH
Confidence 9999999999999999999999999955 9999999999999999999999999 999999999999999996 5677
Q ss_pred HHHHh-CCCCCcccCCCCCCCcccccCCCC
Q psy6441 201 RILLG-GEPGVTINTADLPIVPNYIKNEPL 229 (464)
Q Consensus 201 ~~LL~-~~~~~~~~~~~~~~tpl~laa~~~ 229 (464)
+++|. ..+......+..+.||+++|....
T Consensus 190 v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~~ 219 (228)
T 2dzn_A 190 AVLLVEKYGAEYDLVDNKGAKAEDVALNEQ 219 (228)
T ss_dssp HHHHHHHHCCCSCCBCTTSCBGGGGCSSTT
T ss_pred HHHHHHhcCCCCCccCCCCCcHHHHHHHHH
Confidence 77775 333333456677889999997653
No 29
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.91 E-value=6.9e-24 Score=203.18 Aligned_cols=207 Identities=18% Similarity=0.115 Sum_probs=137.5
Q ss_pred hHhHHHHHHHhcCCCCHHHHHHhcCCc----hhhhccchhHHHHhhhHHHHHHHhc--------CCCCCcchhhhhhcCC
Q psy6441 32 YYSLLNICCKELNIDSPQTILKIRKLP----NTIIRKDKDVARLTMFQEIELVLSQ--------MPDGHGSIVNGMENTH 99 (464)
Q Consensus 32 ~~~lL~i~c~~~~i~~~~~l~~~~~l~----~~~~~~~~~~a~l~~~~ei~~ll~~--------~~~g~TpLh~Aa~~G~ 99 (464)
+.++++.|++...++.++.+.....-. .....+..+.+...+..++...+.+ +..|.||||+|+..|+
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 84 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGS 84 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCC
Confidence 566777777777776666665543322 2223345666665555555444332 2467777777777777
Q ss_pred hhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCccccc---------CCCCCcHHHHHHHcCCHHH
Q psy6441 100 LNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQH---------DMNGWTALHWAAKRGQKDI 170 (464)
Q Consensus 100 ~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~d---------d~~G~TpLH~Aa~~G~~ei 170 (464)
.+++++|++. |++++..+..|+||||+|+..|+.+++++|+++|++++..+ +..|+||||+|+..|+.++
T Consensus 85 ~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 163 (285)
T 1wdy_A 85 VKLLKLFLSK-GADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEV 163 (285)
T ss_dssp HHHHHHHHHT-TCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHH
T ss_pred HHHHHHHHHc-CCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHH
Confidence 7777777777 77777777777777777777777777777777777777652 2367777777777777777
Q ss_pred HHHHHHC-CCCCCCCCCCCCchhHhhc---c----HHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHh
Q psy6441 171 VSYLLKH-GADKSLLTSKEETPLALAT---K----PEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVS 239 (464)
Q Consensus 171 v~lLL~~-GAdin~~D~~G~TPLh~A~---~----~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~s 239 (464)
+++|+++ |++++.+|..|+||||+|+ + .+++++|...+......+..+.||+++|...++..+.++|+.
T Consensus 164 v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 240 (285)
T 1wdy_A 164 LKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE 240 (285)
T ss_dssp HHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHh
Confidence 7777776 7777777777777777774 2 456666543333233445566677777777777777777776
No 30
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.91 E-value=9.9e-25 Score=196.84 Aligned_cols=154 Identities=23% Similarity=0.186 Sum_probs=133.4
Q ss_pred CCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHH
Q psy6441 85 PDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAK 164 (464)
Q Consensus 85 ~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~ 164 (464)
..+.++|++|+..|+.+++++|++. |++++..|..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+.
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~ 89 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMAN-GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDH-AGMTPLRLAAL 89 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHH
T ss_pred CcccchHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHH
Confidence 4567899999999999999999998 999999999999999999999999999999999999998854 89999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhC
Q psy6441 165 RGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSN 240 (464)
Q Consensus 165 ~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn 240 (464)
.|+.+++++|+++|++++.+|..|+||||+|+ +.+++++|...+......+..+.||+++|...++..+.++|.+.
T Consensus 90 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 90 FGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 99999999999999999999999999999996 56777777544333345567788999999999999998888753
No 31
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.91 E-value=1.3e-24 Score=208.47 Aligned_cols=163 Identities=12% Similarity=0.095 Sum_probs=146.5
Q ss_pred CCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCC-CcccccCCCCCcHHHHH
Q psy6441 84 MPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGI-DINAQHDMNGWTALHWA 162 (464)
Q Consensus 84 ~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Ga-dvn~~dd~~G~TpLH~A 162 (464)
+..|.||||+|+..|+.+++++|++. |++++..+..|+||||+|+..|+.+++++|+++|+ +++.++. .|+||||+|
T Consensus 54 d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-~g~t~L~~A 131 (253)
T 1yyh_A 54 DRTGETALHLAARYSRSDAAKRLLEA-SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMH-DGTTPLILA 131 (253)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCT-TCCCHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCC-CCCcHHHHH
Confidence 57899999999999999999999999 99999999999999999999999999999999987 8998854 999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHh
Q psy6441 163 AKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVS 239 (464)
Q Consensus 163 a~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~s 239 (464)
+..|+.+++++|+++|++++.+|..|+||||+|+ +.+++++|...+......+..+.||+++|+..++..+.++|+.
T Consensus 132 ~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 211 (253)
T 1yyh_A 132 ARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLD 211 (253)
T ss_dssp HHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 9999999999999999999999999999999996 5677777754433334556778899999999999999999998
Q ss_pred CCCCCCCCC
Q psy6441 240 NQNRTHQTN 248 (464)
Q Consensus 240 n~~~~~~~~ 248 (464)
.+.....+.
T Consensus 212 ~ga~~~~~d 220 (253)
T 1yyh_A 212 HFANRDITD 220 (253)
T ss_dssp TTCCTTCCC
T ss_pred cCCCccccc
Confidence 877665554
No 32
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.91 E-value=7.5e-24 Score=199.54 Aligned_cols=188 Identities=22% Similarity=0.230 Sum_probs=159.9
Q ss_pred hhhhccchhHHHHhhhHHHHHHHhc--------CCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHh
Q psy6441 59 NTIIRKDKDVARLTMFQEIELVLSQ--------MPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASC 130 (464)
Q Consensus 59 ~~~~~~~~~~a~l~~~~ei~~ll~~--------~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~ 130 (464)
+....+..+.+...+..++...+.+ +..|.||||+|+..|+.+++++|++. |++++..+..|.||||+|+.
T Consensus 8 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~ 86 (237)
T 3b7b_A 8 HQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKA-GALVDPKDAEGSTCLHLAAK 86 (237)
T ss_dssp SCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCCCCCCTTSCCHHHHHHH
T ss_pred cCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHH
Confidence 3344566777776666555544432 36789999999999999999999999 99999999999999999999
Q ss_pred cCCHHHHHHHHHCC-CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhC
Q psy6441 131 LGDFEAVCELVSKG-IDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGG 206 (464)
Q Consensus 131 ~G~~eiVk~LL~~G-advn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~ 206 (464)
.|+.+++++|++.| ++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+ +.+++++|..
T Consensus 87 ~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 165 (237)
T 3b7b_A 87 KGHYEVVQYLLSNGQMDVNCQDD-GGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLA 165 (237)
T ss_dssp TTCHHHHHHHHTTTCCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHT
T ss_pred cCCHHHHHHHHhCCCCCcccCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 99999999999998 89998854 9999999999999999999999999999999999999999996 5678888855
Q ss_pred CCCCcccCCCCCCCcccccCCCCcHHHHHHHHhCCCCCCCCC
Q psy6441 207 EPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSNQNRTHQTN 248 (464)
Q Consensus 207 ~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn~~~~~~~~ 248 (464)
.+......+..+.||+++|....+..+.++|++++.....+.
T Consensus 166 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d 207 (237)
T 3b7b_A 166 AKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKN 207 (237)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred cCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccC
Confidence 444445566778999999999999999999998877665554
No 33
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.91 E-value=6.6e-24 Score=203.34 Aligned_cols=217 Identities=18% Similarity=0.121 Sum_probs=182.4
Q ss_pred CCChHhHHHHHHHhcCCCCHHHHHHhcC---CchhhhccchhHHHHhhhHHHHHHHhc--------CCCCCcchhhhhhc
Q psy6441 29 ELTYYSLLNICCKELNIDSPQTILKIRK---LPNTIIRKDKDVARLTMFQEIELVLSQ--------MPDGHGSIVNGMEN 97 (464)
Q Consensus 29 ~l~~~~lL~i~c~~~~i~~~~~l~~~~~---l~~~~~~~~~~~a~l~~~~ei~~ll~~--------~~~g~TpLh~Aa~~ 97 (464)
+..+.+++++|+.....+.++.+..... ..+....+..+.+...+..++...+.+ +..|.||||+|+..
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 115 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVY 115 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHT
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHh
Confidence 4456799999999999987877776543 233345577788877766666555433 36799999999999
Q ss_pred CChhhhhcchhhcCCCcccc----------cchhhhHHHHHHhcCCHHHHHHHHHC-CCCcccccCCCCCcHHHHHHHcC
Q psy6441 98 THLNSARLPFSVLGVSDMDR----------VKYLEEQLREASCLGDFEAVCELVSK-GIDINAQHDMNGWTALHWAAKRG 166 (464)
Q Consensus 98 G~~~iVk~LL~~~ga~~~~~----------d~~G~TpLh~Aa~~G~~eiVk~LL~~-Gadvn~~dd~~G~TpLH~Aa~~G 166 (464)
|+.+++++|++. |++++.. +..|.||||+|+..|+.+++++|++. |++++.++. .|+||||+|+..|
T Consensus 116 ~~~~~~~~Ll~~-g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-~g~t~l~~a~~~~ 193 (285)
T 1wdy_A 116 GKVKALKFLYKR-GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDN-MGRNALIHALLSS 193 (285)
T ss_dssp TCHHHHHHHHHT-TCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCT-TSCCHHHHHHHCS
T ss_pred CCHHHHHHHHHh-CCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCC-CCCCHHHHHHHcc
Confidence 999999999999 9999887 77899999999999999999999998 999999954 9999999999999
Q ss_pred C----HHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCC-cccCCCCCCCcccccCCCCcHHHHHHHH
Q psy6441 167 Q----KDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGV-TINTADLPIVPNYIKNEPLDPRVNDYQV 238 (464)
Q Consensus 167 ~----~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~-~~~~~~~~~tpl~laa~~~h~a~~~~l~ 238 (464)
+ .+++++|+++|++++.+|..|+||||+|+ +.+++++|....+. ....+..+.||+++|....+..+.++|+
T Consensus 194 ~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll 273 (285)
T 1wdy_A 194 DDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLC 273 (285)
T ss_dssp CTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHH
Confidence 9 99999999999999999999999999996 56788877553333 3556678899999999999999999999
Q ss_pred hCCCCCCCC
Q psy6441 239 SNQNRTHQT 247 (464)
Q Consensus 239 sn~~~~~~~ 247 (464)
.++..+...
T Consensus 274 ~~Ga~~~~~ 282 (285)
T 1wdy_A 274 KRGASTDCG 282 (285)
T ss_dssp HHSSCSCCS
T ss_pred HcCCCCCcc
Confidence 888776554
No 34
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.91 E-value=9.7e-25 Score=196.58 Aligned_cols=155 Identities=20% Similarity=0.073 Sum_probs=115.8
Q ss_pred CCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcC
Q psy6441 87 GHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRG 166 (464)
Q Consensus 87 g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G 166 (464)
+.||||.|+..|+.++++.|++.....++..+..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAK-ERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-TCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcc-cCCCHHHHHHHCC
Confidence 457888888888888888888873333777778888888888888888888888888888887744 7888888888888
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhCCC
Q psy6441 167 QKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSNQN 242 (464)
Q Consensus 167 ~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn~~ 242 (464)
+.+++++|+++|++++.+|..|+||||+|+ +.+++++|...+......+..+.||+++|...++..+.+++..++.
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (172)
T 3v30_A 81 YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHIL 159 (172)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHH
Confidence 888888888888888888888888888885 4566666643333334455667788888888888888877776543
No 35
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.91 E-value=6.1e-24 Score=210.01 Aligned_cols=217 Identities=18% Similarity=0.063 Sum_probs=170.6
Q ss_pred ChHhHHHHHHHhcCCCCHHHHHHhcC----CchhhhccchhHHHHhhhHHHHHHHhc--------CCCCCcchhhhhhcC
Q psy6441 31 TYYSLLNICCKELNIDSPQTILKIRK----LPNTIIRKDKDVARLTMFQEIELVLSQ--------MPDGHGSIVNGMENT 98 (464)
Q Consensus 31 ~~~~lL~i~c~~~~i~~~~~l~~~~~----l~~~~~~~~~~~a~l~~~~ei~~ll~~--------~~~g~TpLh~Aa~~G 98 (464)
.+.+.++.++..+.++.+..+..... ..+....+..+.+...+..++...+.+ +..|.||||+|+..|
T Consensus 23 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g 102 (351)
T 3utm_A 23 YKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYG 102 (351)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred ccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCC
Confidence 35678888999888876655544321 233344567788877776666555443 367899999999999
Q ss_pred ChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCccccc---------------------------
Q psy6441 99 HLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQH--------------------------- 151 (464)
Q Consensus 99 ~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~d--------------------------- 151 (464)
+.+++++|++. |++++..+..|+||||+|+..|+.+++++|+++|++++..+
T Consensus 103 ~~~iv~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~ 181 (351)
T 3utm_A 103 HYEVTELLLKH-GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHS 181 (351)
T ss_dssp CHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccH
Confidence 99999999998 99999999999999999999999999999999999877542
Q ss_pred --------------------------CCCCCcHHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHH
Q psy6441 152 --------------------------DMNGWTALHWAAKR---GQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPE 199 (464)
Q Consensus 152 --------------------------d~~G~TpLH~Aa~~---G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~ 199 (464)
+..|+||||+|+.. +..+++++|+++|++++.+|..|+||||+|+ +.+
T Consensus 182 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~ 261 (351)
T 3utm_A 182 LLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHND 261 (351)
T ss_dssp HHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHH
Confidence 23678999999998 4478999999999999999999999999996 567
Q ss_pred HHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhCCCCCCCCC
Q psy6441 200 VRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSNQNRTHQTN 248 (464)
Q Consensus 200 i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn~~~~~~~~ 248 (464)
++++|...+......+..+.||+++|...++..++++|+.++..+....
T Consensus 262 ~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~ 310 (351)
T 3utm_A 262 VMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIIS 310 (351)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcC
Confidence 8877754443334556778899999999999999999998877655554
No 36
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.91 E-value=9.1e-24 Score=205.83 Aligned_cols=184 Identities=17% Similarity=0.145 Sum_probs=122.5
Q ss_pred CChHhHHHHHHHhcCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHHHHhcCCCCCcchhhhhhcCChhhhhcchhh
Q psy6441 30 LTYYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLSQMPDGHGSIVNGMENTHLNSARLPFSV 109 (464)
Q Consensus 30 l~~~~lL~i~c~~~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~ll~~~~~g~TpLh~Aa~~G~~~iVk~LL~~ 109 (464)
..+.++++.||..+.++.++.+.....-.+ ..+..|.||||+|+..|+.+++++|++.
T Consensus 38 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~----------------------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 95 (299)
T 1s70_B 38 FDDGAVFLAACSSGDTEEVLRLLERGADIN----------------------YANVDGLTALHQACIDDNVDMVKFLVEN 95 (299)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHHHCCCTT----------------------CBCTTCCBHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCccHHHHHHHcCCHHHHHHHHHcCCCCc----------------------ccCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 456789999999998887776665432111 1234555555555555555555555555
Q ss_pred cCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCccccc--------------------------------------
Q psy6441 110 LGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQH-------------------------------------- 151 (464)
Q Consensus 110 ~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~d-------------------------------------- 151 (464)
|++++..|..|+||||+|+..|+.+++++|+++|++++..+
T Consensus 96 -ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 174 (299)
T 1s70_B 96 -GANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEE 174 (299)
T ss_dssp -TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred -CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhh
Confidence 55555555555555555555555555555555555554432
Q ss_pred ---------------------CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCC
Q psy6441 152 ---------------------DMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGE 207 (464)
Q Consensus 152 ---------------------d~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~ 207 (464)
+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+ +.+++++|...
T Consensus 175 ~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 254 (299)
T 1s70_B 175 RIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVEN 254 (299)
T ss_dssp HHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred hHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHc
Confidence 236788899999999999999999999999999999999999986 56777777444
Q ss_pred CCCcccCCCCCCCcccccCCCCcHHHHHH
Q psy6441 208 PGVTINTADLPIVPNYIKNEPLDPRVNDY 236 (464)
Q Consensus 208 ~~~~~~~~~~~~tpl~laa~~~h~a~~~~ 236 (464)
+......+..+.||+++|.....-.+.+.
T Consensus 255 gad~~~~d~~g~t~l~~A~~~~~~~l~~l 283 (299)
T 1s70_B 255 LCDMEAVNKVGQTAFDVADEDILGYLEEL 283 (299)
T ss_dssp TCCTTCCCTTSCCTTTSCCSGGGHHHHHH
T ss_pred CCCCCCcCCCCCCHHHHHHHHHHHHHHHH
Confidence 33334456778899998877554444443
No 37
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.91 E-value=8e-24 Score=199.18 Aligned_cols=186 Identities=16% Similarity=0.041 Sum_probs=155.0
Q ss_pred hhccchhHHHHhhhHHHHH-HHh-----------cCCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHH
Q psy6441 61 IIRKDKDVARLTMFQEIEL-VLS-----------QMPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREA 128 (464)
Q Consensus 61 ~~~~~~~~a~l~~~~ei~~-ll~-----------~~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~A 128 (464)
...+..+.+...+..++.. ++. .+..|.||||+|+..|+.+++++|++. |++++..+..|+||||+|
T Consensus 8 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A 86 (241)
T 1k1a_A 8 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA-GASPMALDRHGQTAAHLA 86 (241)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHH
Confidence 3445566666655544333 222 135799999999999999999999998 999999999999999999
Q ss_pred HhcCCHHHHHHHHHCCC----CcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCchhHhhc---cHHH
Q psy6441 129 SCLGDFEAVCELVSKGI----DINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLT-SKEETPLALAT---KPEV 200 (464)
Q Consensus 129 a~~G~~eiVk~LL~~Ga----dvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D-~~G~TPLh~A~---~~~i 200 (464)
+..|+.+++++|++.|+ +++..+ ..|+||||+|+..|+.+++++|+++|++++..+ ..|+||||+|+ +.++
T Consensus 87 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (241)
T 1k1a_A 87 CEHRSPTCLRALLDSAAPGTLDLEARN-YDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSM 165 (241)
T ss_dssp HHTTCHHHHHHHHHHSCTTSCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred HHcCCHHHHHHHHHcCCCccccccccC-cCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHH
Confidence 99999999999999987 888885 499999999999999999999999999999999 88999999996 5678
Q ss_pred HHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhCCCCCCCCC
Q psy6441 201 RILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSNQNRTHQTN 248 (464)
Q Consensus 201 ~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn~~~~~~~~ 248 (464)
+++|...+......+..+.||+++|+..++..+.++|+.++.....+.
T Consensus 166 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 213 (241)
T 1k1a_A 166 VQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKN 213 (241)
T ss_dssp HHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcC
Confidence 887754433334556778899999999999999999998877665554
No 38
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.91 E-value=1.8e-24 Score=191.48 Aligned_cols=151 Identities=19% Similarity=0.196 Sum_probs=130.8
Q ss_pred CCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcC
Q psy6441 87 GHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRG 166 (464)
Q Consensus 87 g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G 166 (464)
+.|+||.|+..|+.++++.|++..+.+++..+..|+||||+ +..|+.+++++|+++|++++.++. .|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDT-SGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcC
Confidence 45789999999999999999988666888999999999999 999999999999999999999854 8999999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhC
Q psy6441 167 QKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSN 240 (464)
Q Consensus 167 ~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn 240 (464)
+.+++++|+++|++++.+|..|+||||+|+ +.+++++|... ......+..+.||+++|...++..+.++|+++
T Consensus 80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 999999999999999999999999999996 56788888655 33345567788999999999999998888753
No 39
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.91 E-value=5.1e-24 Score=200.40 Aligned_cols=158 Identities=19% Similarity=0.138 Sum_probs=139.3
Q ss_pred CCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCc-----ccccCCCCCcHHH
Q psy6441 86 DGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDI-----NAQHDMNGWTALH 160 (464)
Q Consensus 86 ~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadv-----n~~dd~~G~TpLH 160 (464)
.|.||||+|+..|+.+++++|++..|++++.+|..|+||||+|+..|+.+++++|+++|+++ +.. +..|+||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~-~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSE-LYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCST-TTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhcccccccc-CCCCcCHHH
Confidence 58999999999999999999999879999999999999999999999999999999999987 555 348999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCC-------------CCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccc
Q psy6441 161 WAAKRGQKDIVSYLLKHGADKSLLTS-------------KEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYI 224 (464)
Q Consensus 161 ~Aa~~G~~eiv~lLL~~GAdin~~D~-------------~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~l 224 (464)
+|+..|+.+++++|+++|++++.++. .|+||||+|+ +.+++++|...+......+..+.||+++
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~ 160 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHI 160 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 99999999999999999999998876 7999999996 5678887754433335567788999999
Q ss_pred cCCCCcHHHH----HHHHhCCCCC
Q psy6441 225 KNEPLDPRVN----DYQVSNQNRT 244 (464)
Q Consensus 225 aa~~~h~a~~----~~l~sn~~~~ 244 (464)
|+...+..+. ++|++.+...
T Consensus 161 A~~~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 161 LILQPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp HHTCSCHHHHHHHHHHHHHTTCSC
T ss_pred HHHcCChHHHHHHHHHHHhcCCch
Confidence 9999999887 8888776654
No 40
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.91 E-value=6e-24 Score=218.93 Aligned_cols=215 Identities=20% Similarity=0.147 Sum_probs=140.9
Q ss_pred hHhHHHHHHHhcCCCCHHHHHHhcCCch---hhhccchhHHHHhhhHHHHHHHhc--------CCCCCcchhhhhhcCCh
Q psy6441 32 YYSLLNICCKELNIDSPQTILKIRKLPN---TIIRKDKDVARLTMFQEIELVLSQ--------MPDGHGSIVNGMENTHL 100 (464)
Q Consensus 32 ~~~lL~i~c~~~~i~~~~~l~~~~~l~~---~~~~~~~~~a~l~~~~ei~~ll~~--------~~~g~TpLh~Aa~~G~~ 100 (464)
+.++++.|+....++.++.+......++ ....+..+.+...+..++...+.. +..|.||||+|+..|+.
T Consensus 146 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 225 (437)
T 1n11_A 146 GFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQV 225 (437)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCH
Confidence 4455666666555554444444322111 122344555555555454444432 13567777777777777
Q ss_pred hhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCC
Q psy6441 101 NSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGAD 180 (464)
Q Consensus 101 ~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAd 180 (464)
+++++|++. |++++..+..|.||||+|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++
T Consensus 226 ~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 303 (437)
T 1n11_A 226 EVARSLLQY-GGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNK-SGLTPLHLVAQEGHVPVADVLIKHGVM 303 (437)
T ss_dssp HHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT-TCCCHHHHHHHHTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHc-CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHhCCcc
Confidence 777777776 777777777777777777777777777777777777777743 777777777777777777777777777
Q ss_pred CCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhCCCCCCCCC
Q psy6441 181 KSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSNQNRTHQTN 248 (464)
Q Consensus 181 in~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn~~~~~~~~ 248 (464)
++.+|..|+||||+|+ +.+++++|...+...+..+..+.||+++|+..++.+++++|+.++..+....
T Consensus 304 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~ 374 (437)
T 1n11_A 304 VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVS 374 (437)
T ss_dssp TTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCC
T ss_pred CCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCC
Confidence 7777777888888775 3466666643333234455667788888888888888888777766555444
No 41
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.91 E-value=4.5e-24 Score=196.10 Aligned_cols=155 Identities=17% Similarity=0.123 Sum_probs=138.5
Q ss_pred CCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHH-HCCCCcccccCCCCCcHHHHH
Q psy6441 84 MPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELV-SKGIDINAQHDMNGWTALHWA 162 (464)
Q Consensus 84 ~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL-~~Gadvn~~dd~~G~TpLH~A 162 (464)
+..|.||||+|+..|+.+++++|++. |++++..+..|+||||+|+..|+.+++++|+ ..+++++..+. .|+||||+|
T Consensus 36 ~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~L~~A 113 (201)
T 3hra_A 36 DTEGNTPLNIAVHNNDIEIAKALIDR-GADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNR-YGGNALIPA 113 (201)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCT-TSCCSHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccC-CCCcHHHHH
Confidence 46899999999999999999999999 9999999999999999999999999999999 56889999854 999999999
Q ss_pred HHcCCHHHHHHHHHCC-CCCCCCCCCCCchhHhhc---c-----HHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHH
Q psy6441 163 AKRGQKDIVSYLLKHG-ADKSLLTSKEETPLALAT---K-----PEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRV 233 (464)
Q Consensus 163 a~~G~~eiv~lLL~~G-Adin~~D~~G~TPLh~A~---~-----~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~ 233 (464)
+..|+.+++++|+++| ++++.+|..|+||||+|+ . .+++++|...+......+..+.||+++|...++.++
T Consensus 114 ~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~ 193 (201)
T 3hra_A 114 AEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEI 193 (201)
T ss_dssp HHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhH
Confidence 9999999999999998 999999999999999996 2 678887754443335566778899999999999999
Q ss_pred HHHHHhC
Q psy6441 234 NDYQVSN 240 (464)
Q Consensus 234 ~~~l~sn 240 (464)
.++|++.
T Consensus 194 ~~~Ll~~ 200 (201)
T 3hra_A 194 SKILAQY 200 (201)
T ss_dssp HHHHHTC
T ss_pred HHHHHhc
Confidence 9988754
No 42
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=2.9e-24 Score=183.72 Aligned_cols=118 Identities=24% Similarity=0.242 Sum_probs=112.5
Q ss_pred CCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHH
Q psy6441 85 PDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAK 164 (464)
Q Consensus 85 ~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~ 164 (464)
..|.||||+|+..|+.+++++|++. |++++..|..|+||||+|+..|+.+++++|+++|++++.+|. .|+||||+|+.
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~-~g~tpL~~A~~ 82 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAK-GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDK-HHITPLLSAVY 82 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHT-TCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT-TSCCHHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHc-CCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCCCHHHHHHH
Confidence 4688999999999999999999998 999999999999999999999999999999999999999965 99999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCchhHhhccHHHHHHH
Q psy6441 165 RGQKDIVSYLLKHGADKSLLTSKEETPLALATKPEVRILL 204 (464)
Q Consensus 165 ~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~~~~i~~LL 204 (464)
.|+.+++++|+++|++++.+|..|+||||+|...++.++|
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ll 122 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALL 122 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHHh
Confidence 9999999999999999999999999999999999988887
No 43
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.91 E-value=2e-24 Score=191.37 Aligned_cols=147 Identities=22% Similarity=0.192 Sum_probs=84.6
Q ss_pred CcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCC
Q psy6441 88 HGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQ 167 (464)
Q Consensus 88 ~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~ 167 (464)
.++||.|+..|+.+++++|++. |++++ .+..|+||||+|+..|+.+++++|++.|++++.++. .|+||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~-g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMAN-GAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTK-VDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHH-TCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT-TCCCHHHHHHHHTC
T ss_pred cHHHHHHHHcCCHHHHHHHHHc-CCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCh
Confidence 3556666666666666666665 55544 355566666666666666666666666666665533 56666666666666
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHH
Q psy6441 168 KDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQ 237 (464)
Q Consensus 168 ~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l 237 (464)
.+++++|+++|++++.+|..|+||||+|+ +.+++++|...+......+..+.||+++|...++..+.++|
T Consensus 80 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 80 ANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 66666666666666666666666666664 34555555332222233344555666666666665555543
No 44
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.91 E-value=7.5e-24 Score=197.72 Aligned_cols=163 Identities=12% Similarity=0.091 Sum_probs=145.3
Q ss_pred CCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCC-CcccccCCCCCcHHHHH
Q psy6441 84 MPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGI-DINAQHDMNGWTALHWA 162 (464)
Q Consensus 84 ~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Ga-dvn~~dd~~G~TpLH~A 162 (464)
+..|.||||+|+..|+.+++++|++. |++++..+..|+||||+|+..|+.+++++|++.++ +++..+ ..|+||||+|
T Consensus 22 d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~A 99 (223)
T 2f8y_A 22 DRTGETALHLAARYSRSDAAKRLLEA-SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM-HDGTTPLILA 99 (223)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCC-TTCCCHHHHH
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCcHHHHH
Confidence 56899999999999999999999999 99999999999999999999999999999999987 888885 4999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHh
Q psy6441 163 AKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVS 239 (464)
Q Consensus 163 a~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~s 239 (464)
+..|+.+++++|+++|++++.+|..|+||||+|+ +.+++++|...+......+..+.||+++|+..++..+.++|+.
T Consensus 100 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 179 (223)
T 2f8y_A 100 ARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLD 179 (223)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999999999999999999996 5677777754433334556788899999999999999999998
Q ss_pred CCCCCCCCC
Q psy6441 240 NQNRTHQTN 248 (464)
Q Consensus 240 n~~~~~~~~ 248 (464)
.+.....+.
T Consensus 180 ~ga~~~~~~ 188 (223)
T 2f8y_A 180 HFANRDITD 188 (223)
T ss_dssp TTCCTTCCC
T ss_pred cCCCCcccc
Confidence 876655443
No 45
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.90 E-value=1e-23 Score=217.26 Aligned_cols=218 Identities=18% Similarity=0.132 Sum_probs=178.1
Q ss_pred cCCChHhHHHHHHHhcCCCCHHHHHHhcCC---chhhhccchhHHHHhhhHHHHHHHhc--------CCCCCcchhhhhh
Q psy6441 28 TELTYYSLLNICCKELNIDSPQTILKIRKL---PNTIIRKDKDVARLTMFQEIELVLSQ--------MPDGHGSIVNGME 96 (464)
Q Consensus 28 ~~l~~~~lL~i~c~~~~i~~~~~l~~~~~l---~~~~~~~~~~~a~l~~~~ei~~ll~~--------~~~g~TpLh~Aa~ 96 (464)
.+-++.++|++|+..+.++.++.+.....- .+....+..+.+...+..++...+.+ +..|.||||+|+.
T Consensus 10 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 89 (437)
T 1n11_A 10 GGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAAR 89 (437)
T ss_dssp -----CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHH
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Confidence 345678999999999999888887775432 23334567788887777666655543 3678999999999
Q ss_pred cCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy6441 97 NTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLK 176 (464)
Q Consensus 97 ~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~ 176 (464)
.|+.++|++|++. |++++..+..|.||||+|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|++
T Consensus 90 ~g~~~~v~~Ll~~-ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~ 167 (437)
T 1n11_A 90 IGHTNMVKLLLEN-NANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTK-KGFTPLHVAAKYGKVRVAELLLE 167 (437)
T ss_dssp HTCHHHHHHHHHH-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCC-CCCCHHHHHHHcCCHHHHHHHHh
Confidence 9999999999999 999999999999999999999999999999999999998854 89999999999999999999999
Q ss_pred CCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhCCCCCCCC
Q psy6441 177 HGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSNQNRTHQT 247 (464)
Q Consensus 177 ~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn~~~~~~~ 247 (464)
+|++++..+..|.||||+|+ +.+++++|...+......+..+.||++.++..++..+.++|+..+.....+
T Consensus 168 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 241 (437)
T 1n11_A 168 RDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAE 241 (437)
T ss_dssp TTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC
Confidence 99999999999999999996 568888885544444455667889999999999999999999876554443
No 46
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.90 E-value=8.9e-24 Score=203.93 Aligned_cols=174 Identities=17% Similarity=0.146 Sum_probs=118.8
Q ss_pred cCCChHhHHHHHHHhcCCCCHHHHHHhcCC---chhhhccchhHHHHhhhHHHHHHHhc-------CCCCCcchhhhhhc
Q psy6441 28 TELTYYSLLNICCKELNIDSPQTILKIRKL---PNTIIRKDKDVARLTMFQEIELVLSQ-------MPDGHGSIVNGMEN 97 (464)
Q Consensus 28 ~~l~~~~lL~i~c~~~~i~~~~~l~~~~~l---~~~~~~~~~~~a~l~~~~ei~~ll~~-------~~~g~TpLh~Aa~~ 97 (464)
.+..+.+++++|+.....+.++.+.....- .+....+..+.+...+..++...+.+ ..+|.||||+|+..
T Consensus 32 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~ 111 (261)
T 2xai_A 32 ITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARR 111 (261)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHc
Confidence 455678999999999888877777664322 22333455666665555555444432 13567777777777
Q ss_pred CChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHC
Q psy6441 98 THLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKH 177 (464)
Q Consensus 98 G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~ 177 (464)
|+.+++++|++. |++++..|..|+||||+|+..|+.+++++|+++|++++. + ..|+||||+|+..|+.+++++|+++
T Consensus 112 ~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~-~~g~t~Lh~A~~~~~~~~v~~Ll~~ 188 (261)
T 2xai_A 112 GHVECVNSLIAY-GGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-G-KGQDSPLHAVARTASEELACLLMDF 188 (261)
T ss_dssp TCHHHHHHHHHT-TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-C-BTTBCHHHHHHHHTCHHHHHHHHHT
T ss_pred CcHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-C-CCCCChHHHHHHcCCHHHHHHHHHc
Confidence 777777777777 777777777777777777777777777777777777774 2 3677777777777777777777777
Q ss_pred CCCCCCCCCCCCchhHhhc-cHHHHHHH
Q psy6441 178 GADKSLLTSKEETPLALAT-KPEVRILL 204 (464)
Q Consensus 178 GAdin~~D~~G~TPLh~A~-~~~i~~LL 204 (464)
|+|++.+|..|+||||+|+ +..++++|
T Consensus 189 gad~~~~d~~g~tpl~~A~~~~~~~~~l 216 (261)
T 2xai_A 189 GADTQAKNAEGKRPVELVPPESPLAQLF 216 (261)
T ss_dssp TCCTTCCCTTSCCGGGGSCTTCTHHHHH
T ss_pred CCCCCCcCCCCCChhhhccccccHHHHH
Confidence 7777777777777777775 33455555
No 47
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.90 E-value=1.7e-24 Score=195.06 Aligned_cols=121 Identities=25% Similarity=0.258 Sum_probs=114.6
Q ss_pred cCCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHH
Q psy6441 83 QMPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWA 162 (464)
Q Consensus 83 ~~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~A 162 (464)
.+..|.||||+|+..|+.+++++|++. |++++..+..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+|
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A 109 (172)
T 3v30_A 32 PDERGFTPLIWASAFGEIETVRFLLEW-GADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYD-WNGGTPLLYA 109 (172)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC-TTSCCHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHH
Confidence 356899999999999999999999999 99999999999999999999999999999999999999995 4999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHh
Q psy6441 163 AKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLG 205 (464)
Q Consensus 163 a~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~ 205 (464)
+..|+.+++++|+++|++++.+|..|+||||+|+ +.+++++|.
T Consensus 110 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 155 (172)
T 3v30_A 110 VRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIE 155 (172)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 9999999999999999999999999999999996 567888874
No 48
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.90 E-value=1.3e-23 Score=192.84 Aligned_cols=154 Identities=21% Similarity=0.165 Sum_probs=135.7
Q ss_pred cCCChHhHHHHHHHhcCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHHHHhcCCCCCcchhhhhhcCChhhhhcch
Q psy6441 28 TELTYYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLSQMPDGHGSIVNGMENTHLNSARLPF 107 (464)
Q Consensus 28 ~~l~~~~lL~i~c~~~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~ll~~~~~g~TpLh~Aa~~G~~~iVk~LL 107 (464)
.+..+.++++.||.....+.++.+...... +...+..|.||||+|+..|+.+++++|+
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~----------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 88 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVENFDK----------------------LEDKDIEGSTALIWAVKNNRLGIAEKLL 88 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHHHCC----------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhccc----------------------cccccccCccHHHHHHHcCCHHHHHHHH
Confidence 456678899999998888766666543211 1123568999999999999999999999
Q ss_pred hhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Q psy6441 108 SVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSK 187 (464)
Q Consensus 108 ~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~ 187 (464)
+. |++++..|..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..
T Consensus 89 ~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 166 (192)
T 2rfm_A 89 SK-GSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNL-EGETPLIVASKYGRSEIVKKLLELGADISARDLT 166 (192)
T ss_dssp HH-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTT
T ss_pred HC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC
Confidence 99 999999999999999999999999999999999999999954 9999999999999999999999999999999999
Q ss_pred CCchhHhhc---cHHHHHHHh
Q psy6441 188 EETPLALAT---KPEVRILLG 205 (464)
Q Consensus 188 G~TPLh~A~---~~~i~~LL~ 205 (464)
|+||||+|+ +.+++++|.
T Consensus 167 g~t~l~~A~~~~~~~~v~~Ll 187 (192)
T 2rfm_A 167 GLTAEASARIFGRQEVIKIFT 187 (192)
T ss_dssp SCBHHHHHHHTTCHHHHHHHH
T ss_pred CCCHHHHHHHhCcHHHHHHHH
Confidence 999999996 668888873
No 49
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.90 E-value=1.5e-23 Score=187.52 Aligned_cols=155 Identities=21% Similarity=0.233 Sum_probs=131.5
Q ss_pred CChHhHHHHHHHhcCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHHHHhcCCCCCcchhhhhhcCChhhhhcchhh
Q psy6441 30 LTYYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLSQMPDGHGSIVNGMENTHLNSARLPFSV 109 (464)
Q Consensus 30 l~~~~lL~i~c~~~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~ll~~~~~g~TpLh~Aa~~G~~~iVk~LL~~ 109 (464)
..+.++++.|++...++.++.+...... .....+..|.||||+|+..|+.+++++|++.
T Consensus 6 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~---------------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 64 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVETVKKLCTVQSV---------------------NCRDIEGRQSTPLHFAAGYNRVSVVEYLLQH 64 (165)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHCCTTTT---------------------TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred chhhHHHHHHHHhCCHHHHHHHHHcCCC---------------------CccccccCCCCHHHHHHHcChHHHHHHHHhc
Confidence 3466778888888777544443321110 0012245789999999999999999999999
Q ss_pred cCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Q psy6441 110 LGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKEE 189 (464)
Q Consensus 110 ~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~ 189 (464)
|++++..|..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus 65 -g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 142 (165)
T 3twr_A 65 -GADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADL-WKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGN 142 (165)
T ss_dssp -TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred -CCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC
Confidence 999999999999999999999999999999999999999955 999999999999999999999999999999999999
Q ss_pred chhHhhc--cHHHHHHHhCC
Q psy6441 190 TPLALAT--KPEVRILLGGE 207 (464)
Q Consensus 190 TPLh~A~--~~~i~~LL~~~ 207 (464)
||||+|. +.+++++|...
T Consensus 143 t~l~~a~~~~~~i~~~L~~~ 162 (165)
T 3twr_A 143 TPLDLVKDGDTDIQDLLRGD 162 (165)
T ss_dssp CTGGGSCTTCHHHHHHHHTC
T ss_pred ChhHhHhcCChHHHHHHhhc
Confidence 9999996 56899998544
No 50
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=7.5e-24 Score=184.28 Aligned_cols=120 Identities=22% Similarity=0.186 Sum_probs=113.9
Q ss_pred cCCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHH
Q psy6441 83 QMPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWA 162 (464)
Q Consensus 83 ~~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~A 162 (464)
.+..|.||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A 83 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQN-GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGY-QNDSPLHDA 83 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCG-GGCCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCC-CCCCHHHHH
Confidence 457899999999999999999999999 999999999999999999999999999999999999999955 999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhccHHHHHHH
Q psy6441 163 AKRGQKDIVSYLLKHGADKSLLTSKEETPLALATKPEVRILL 204 (464)
Q Consensus 163 a~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~~~~i~~LL 204 (464)
+..|+.+++++|+++|++++.+|..|+||||+|+.....+++
T Consensus 84 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l 125 (137)
T 3c5r_A 84 AKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLL 125 (137)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHH
Confidence 999999999999999999999999999999999977666666
No 51
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.90 E-value=5.7e-24 Score=216.60 Aligned_cols=212 Identities=14% Similarity=0.102 Sum_probs=163.1
Q ss_pred CChHhHHHHHHHhcCCCCHHHHHH--------hc---CCchhhhccchhHHHHhhhHHHHHHHhc--------CCCCCcc
Q psy6441 30 LTYYSLLNICCKELNIDSPQTILK--------IR---KLPNTIIRKDKDVARLTMFQEIELVLSQ--------MPDGHGS 90 (464)
Q Consensus 30 l~~~~lL~i~c~~~~i~~~~~l~~--------~~---~l~~~~~~~~~~~a~l~~~~ei~~ll~~--------~~~g~Tp 90 (464)
..+.++|++|+.....+.++.+.. .. +..+....+.++.|...+..++..++.+ +..|.||
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~ 202 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSA 202 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCH
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCH
Confidence 467889999999888876666542 11 2334455667778877777666655543 2578899
Q ss_pred hhhhhhcCChhhhhcchhhcC---CCcccccchhhhHHHHHHhcC---CHHHHHHHHHCCCCcccc-------cCCCCCc
Q psy6441 91 IVNGMENTHLNSARLPFSVLG---VSDMDRVKYLEEQLREASCLG---DFEAVCELVSKGIDINAQ-------HDMNGWT 157 (464)
Q Consensus 91 Lh~Aa~~G~~~iVk~LL~~~g---a~~~~~d~~G~TpLh~Aa~~G---~~eiVk~LL~~Gadvn~~-------dd~~G~T 157 (464)
||+|+..|+.+++++|++. + ++++..|..|+||||+|+..| +.+++++|+++|++++.. .+..|+|
T Consensus 203 L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t 281 (373)
T 2fo1_E 203 LHQAAANRDFGMMVYMLNS-TKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRT 281 (373)
T ss_dssp HHHHHHTTCHHHHHHHTTS-HHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCC
T ss_pred HHHHHHCCCHHHHHHHHhc-CccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCC
Confidence 9999999999999999887 5 788888888999999999887 788999999999888762 1347889
Q ss_pred HHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHH
Q psy6441 158 ALHWAAKRGQKDIVSYLLKHG-ADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRV 233 (464)
Q Consensus 158 pLH~Aa~~G~~eiv~lLL~~G-Adin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~ 233 (464)
|||+|+..|+.+++++|+++| ++++.+|..|+||||+|+ +.+++++|...+......+..+.||+++|...++..+
T Consensus 282 ~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~i 361 (373)
T 2fo1_E 282 ALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNI 361 (373)
T ss_dssp THHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHH
Confidence 999999999999999999765 899999999999999986 5577777744433334456678899999999999999
Q ss_pred HHHHHhCCC
Q psy6441 234 NDYQVSNQN 242 (464)
Q Consensus 234 ~~~l~sn~~ 242 (464)
+++|..++.
T Consensus 362 v~~Ll~~~a 370 (373)
T 2fo1_E 362 VDIFDRCRP 370 (373)
T ss_dssp HHHHHTTC-
T ss_pred HHHHHhcCc
Confidence 888886543
No 52
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.90 E-value=1.6e-23 Score=185.53 Aligned_cols=148 Identities=22% Similarity=0.244 Sum_probs=128.8
Q ss_pred hHhHHHHHHHhcCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHHHHhcCCCCCcchhhhhhcCChhhhhcchhhcC
Q psy6441 32 YYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLSQMPDGHGSIVNGMENTHLNSARLPFSVLG 111 (464)
Q Consensus 32 ~~~lL~i~c~~~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~ll~~~~~g~TpLh~Aa~~G~~~iVk~LL~~~g 111 (464)
+.++++.|+....++.++.+....... ..+..|.||||+|+..|+.+++++|++. |
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~-----------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g 57 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPF-----------------------TTDWLGTSPLHLAAQYGHFSTTEVLLRA-G 57 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCC-----------------------CCCTTCCCHHHHHHHHTCHHHHHHHHTT-T
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCC-----------------------CcCCCCCCHHHHHHHcCCHHHHHHHHHc-C
Confidence 346777777777776555554422100 1245799999999999999999999998 9
Q ss_pred CCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCch
Q psy6441 112 VSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKEETP 191 (464)
Q Consensus 112 a~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TP 191 (464)
++++..+..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..|+||
T Consensus 58 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 136 (153)
T 1awc_B 58 VSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDM-LKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTA 136 (153)
T ss_dssp CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCH
Confidence 99999999999999999999999999999999999999954 99999999999999999999999999999999999999
Q ss_pred hHhhc---cHHHHHHH
Q psy6441 192 LALAT---KPEVRILL 204 (464)
Q Consensus 192 Lh~A~---~~~i~~LL 204 (464)
||+|+ +.+++++|
T Consensus 137 l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 137 FDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHTTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHh
Confidence 99996 56888887
No 53
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.90 E-value=1.8e-23 Score=203.77 Aligned_cols=109 Identities=26% Similarity=0.323 Sum_probs=102.8
Q ss_pred CCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHc
Q psy6441 86 DGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKR 165 (464)
Q Consensus 86 ~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~ 165 (464)
+|.|+||.||..|+.++|++|++. |++++..|..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~tpL~~A~~~ 116 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLER-GADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDN-EGWIPLHAAASC 116 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHH-CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHc
Confidence 567899999999999999999999 999999999999999999999999999999999999999955 999999999999
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCchhHhhc
Q psy6441 166 GQKDIVSYLLKHGADKSLLTSKEETPLALAT 196 (464)
Q Consensus 166 G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~ 196 (464)
|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 117 g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~ 147 (299)
T 1s70_B 117 GYLDIAEYLISQGAHVGAVNSEGDTPLDIAE 147 (299)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred CCHHHHHHHHhCCCCCCCcCCCCCCHHHHHH
Confidence 9999999999999999999888887777764
No 54
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.90 E-value=6.7e-24 Score=200.70 Aligned_cols=165 Identities=15% Similarity=0.032 Sum_probs=139.4
Q ss_pred cCCCCCcchhhhhhcCChhhhhcchhhc---CCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHH
Q psy6441 83 QMPDGHGSIVNGMENTHLNSARLPFSVL---GVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTAL 159 (464)
Q Consensus 83 ~~~~g~TpLh~Aa~~G~~~iVk~LL~~~---ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpL 159 (464)
.+.+|.||||+|+..|+.+++++|++.. +++++..+..|+||||+|+..|+.+++++|+++|++++.++. .|+|||
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L 82 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDF-RGNTPL 82 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCT-TCCCHH
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHH
Confidence 3578999999999999999999999872 237899999999999999999999999999999999999955 999999
Q ss_pred HHHHHcCCHHHHHHHHHCCCC------CCCCCCCCCchhHhhc---cHHHHHHHhC-CCCCcccCCCCCCCcccccCCCC
Q psy6441 160 HWAAKRGQKDIVSYLLKHGAD------KSLLTSKEETPLALAT---KPEVRILLGG-EPGVTINTADLPIVPNYIKNEPL 229 (464)
Q Consensus 160 H~Aa~~G~~eiv~lLL~~GAd------in~~D~~G~TPLh~A~---~~~i~~LL~~-~~~~~~~~~~~~~tpl~laa~~~ 229 (464)
|+|+..|+.+++++|+++|++ ++..|..|+||||+|+ +.+++++|.. +..........+.||+++|+..+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~ 162 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ 162 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC
Confidence 999999999999999999986 5778889999999996 5677777743 33343333337899999999999
Q ss_pred cHHHHHHHHhCCCCCCCCC
Q psy6441 230 DPRVNDYQVSNQNRTHQTN 248 (464)
Q Consensus 230 h~a~~~~l~sn~~~~~~~~ 248 (464)
+..++++|++++.......
T Consensus 163 ~~~~v~~Ll~~ga~~~~~~ 181 (236)
T 1ikn_D 163 NPDLVSLLLKCGADVNRVT 181 (236)
T ss_dssp CHHHHHHHHTTTCCSCCCC
T ss_pred CHHHHHHHHHcCCCCCccc
Confidence 9999999998876655544
No 55
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.90 E-value=1.9e-23 Score=204.32 Aligned_cols=169 Identities=15% Similarity=0.074 Sum_probs=126.2
Q ss_pred CCCCcchhhhhhcCChh-hhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHH
Q psy6441 85 PDGHGSIVNGMENTHLN-SARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAA 163 (464)
Q Consensus 85 ~~g~TpLh~Aa~~G~~~-iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa 163 (464)
..|.||||.|+..++.+ +++.|++. |++++..|..|+||||+|+..|+.++|++|++.|++++.++. .|+||+|+|+
T Consensus 50 ~~~~t~L~~a~~~~~~~~~v~~Ll~~-Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~-~g~t~l~~a~ 127 (269)
T 4b93_B 50 PEFCHPLCQCPKCAPAQKRLAKVPAS-GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNA-DQAVPLHLAC 127 (269)
T ss_dssp -------------------------C-CCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCT-TCCCHHHHHH
T ss_pred ccCCCHHHHHHHhCCHHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCC-CCCCcccccc
Confidence 56889999999988764 77888888 999999999999999999999999999999999999999955 9999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhC
Q psy6441 164 KRGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSN 240 (464)
Q Consensus 164 ~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn 240 (464)
..++.+++++|+++|++++.+|..|+||||+|+ +.+++++|...+...+..+..+.||+++|+..++..++++|+++
T Consensus 128 ~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 207 (269)
T 4b93_B 128 QQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLH 207 (269)
T ss_dssp HHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHT
T ss_pred ccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHC
Confidence 999999999999999999999999999999997 45677777443333345677889999999999999999999998
Q ss_pred CCCCCCCCCCCCCCCc
Q psy6441 241 QNRTHQTNPVTANQNV 256 (464)
Q Consensus 241 ~~~~~~~~p~~~~~p~ 256 (464)
+.....+. ..+.+|.
T Consensus 208 Gad~~~~d-~~G~TpL 222 (269)
T 4b93_B 208 GASVQVLN-KRQRTAV 222 (269)
T ss_dssp TCCSCCCC-TTSCCSG
T ss_pred CCCCCCcC-CCCCCHH
Confidence 87766655 3444443
No 56
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.90 E-value=2.2e-23 Score=207.66 Aligned_cols=210 Identities=16% Similarity=0.080 Sum_probs=140.7
Q ss_pred ChHhHHHHHHHhcCCCCHHHHHHhcCCc------------------------------------hhhhccchhHHHHhhh
Q psy6441 31 TYYSLLNICCKELNIDSPQTILKIRKLP------------------------------------NTIIRKDKDVARLTMF 74 (464)
Q Consensus 31 ~~~~lL~i~c~~~~i~~~~~l~~~~~l~------------------------------------~~~~~~~~~~a~l~~~ 74 (464)
.+.++|++|+.....+.++.++.....+ +....+..+.+...+.
T Consensus 58 ~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~ 137 (337)
T 4g8k_A 58 GGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK 137 (337)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTC
T ss_pred CCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCc
Confidence 4678999999998888777776643221 1122234445554444
Q ss_pred HHHHHHHhc------------------CCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCC---
Q psy6441 75 QEIELVLSQ------------------MPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGD--- 133 (464)
Q Consensus 75 ~ei~~ll~~------------------~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~--- 133 (464)
.++...+.. +..|.||||+|+..|+.++|++||++.|++++..|..|.|+||+++..++
T Consensus 138 ~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~ 217 (337)
T 4g8k_A 138 VKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSD 217 (337)
T ss_dssp HHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTT
T ss_pred HHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCccc
Confidence 444333321 13467788888888888888888766577888777778888777665443
Q ss_pred -HHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCchhHhhc---cHHHHHHHhCCC
Q psy6441 134 -FEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKH-GADKSLLTSKEETPLALAT---KPEVRILLGGEP 208 (464)
Q Consensus 134 -~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~-GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~ 208 (464)
..++++|+++|+++|.++. .|+||||+|+..|+.+++++|+.. |++++.+|..|+||||+|+ +.+++++|...+
T Consensus 218 ~~~i~~lLl~~gad~n~~d~-~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G 296 (337)
T 4g8k_A 218 VEAITHLLLDHGADVNVRGE-RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG 296 (337)
T ss_dssp HHHHHHHHHHTTCCTTCCCG-GGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTS
T ss_pred HHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 3467777788888887754 788888888888888888887774 7788888888888888885 456777664332
Q ss_pred CCcccCCCCCCCcccccCCCCcHHHHHHHHhCCCCCCC
Q psy6441 209 GVTINTADLPIVPNYIKNEPLDPRVNDYQVSNQNRTHQ 246 (464)
Q Consensus 209 ~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn~~~~~~ 246 (464)
++. ...+|++.|+..++.+++++|+++++.+..
T Consensus 297 -Ad~----n~~~~L~~A~~~~~~~iv~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 297 -AST----DCGDLVMTARRNYDHSLVKVLLSHGAKEDF 329 (337)
T ss_dssp -CSS----TTCCHHHHHHHTTCHHHHHHHHHTTCCC--
T ss_pred -CCC----CCCCHHHHHHHcCCHHHHHHHHHCcCCCCC
Confidence 221 123577888777888888888877765543
No 57
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.90 E-value=4.6e-23 Score=203.71 Aligned_cols=208 Identities=17% Similarity=0.076 Sum_probs=169.6
Q ss_pred cCCChHhHHHHHHHhcCCCCHHHHHHhcC---CchhhhccchhHHHHhhhHHHHHHHhc--------CCCCCcchhhhhh
Q psy6441 28 TELTYYSLLNICCKELNIDSPQTILKIRK---LPNTIIRKDKDVARLTMFQEIELVLSQ--------MPDGHGSIVNGME 96 (464)
Q Consensus 28 ~~l~~~~lL~i~c~~~~i~~~~~l~~~~~---l~~~~~~~~~~~a~l~~~~ei~~ll~~--------~~~g~TpLh~Aa~ 96 (464)
.+..+.++|++|+....++.++.+..... ..+....+..+.+...+..++...+.+ +..|.||||+|+.
T Consensus 54 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~ 133 (351)
T 3utm_A 54 SDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAAS 133 (351)
T ss_dssp SSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 45567899999999999988888777543 233445577888888777777665544 3578999999999
Q ss_pred cCChhhhhcchhhcCCCccccc------------------------------------------------------chhh
Q psy6441 97 NTHLNSARLPFSVLGVSDMDRV------------------------------------------------------KYLE 122 (464)
Q Consensus 97 ~G~~~iVk~LL~~~ga~~~~~d------------------------------------------------------~~G~ 122 (464)
.|+.+++++|++. |++++..+ ..|+
T Consensus 134 ~~~~~~v~~Ll~~-g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 212 (351)
T 3utm_A 134 KNRVEVCSLLLSH-GADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHE 212 (351)
T ss_dssp TTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCC
T ss_pred cCCHHHHHHHHHc-CCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCC
Confidence 9999999999999 88877544 4567
Q ss_pred hHHHHHHhc---CCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---
Q psy6441 123 EQLREASCL---GDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT--- 196 (464)
Q Consensus 123 TpLh~Aa~~---G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~--- 196 (464)
||||+|+.. +..+++++|++.|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 213 t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~ 291 (351)
T 3utm_A 213 TALHCAVASLHPKRKQVAELLLRKGANVNEKNK-DFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAG 291 (351)
T ss_dssp CHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Confidence 999999999 558999999999999999955 9999999999999999999999999999999999999999996
Q ss_pred cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhCC
Q psy6441 197 KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSNQ 241 (464)
Q Consensus 197 ~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn~ 241 (464)
+.+++++|...+......+..+.||++++ +.++.+.+..+.
T Consensus 292 ~~~~v~~Ll~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~ 332 (351)
T 3utm_A 292 HLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSEST 332 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC-
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhcc
Confidence 56888888544444455667788999988 456667666553
No 58
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.90 E-value=8.2e-24 Score=207.71 Aligned_cols=159 Identities=15% Similarity=0.065 Sum_probs=121.4
Q ss_pred CCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCC-CcHHHHHHH
Q psy6441 86 DGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNG-WTALHWAAK 164 (464)
Q Consensus 86 ~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G-~TpLH~Aa~ 164 (464)
+|.||||+|+..|+.+++++|++. |++++..|..|+||||+|+..|+.+++++|+++|++++.++. .| .||||+|+.
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~~t~L~~A~~ 138 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFS-GLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGK-TGWKTSFYHAVM 138 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSS-SGGGSHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCC-CCCCCHHHHHHH
Confidence 578888888888888888888888 888888888888888888888888888888888888888854 77 688888888
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCc-ccccCCCCcHHHHHHHHhC
Q psy6441 165 RGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVP-NYIKNEPLDPRVNDYQVSN 240 (464)
Q Consensus 165 ~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tp-l~laa~~~h~a~~~~l~sn 240 (464)
.|+.+++++|+++|+++... ..|+||||+|+ +.+++++|...+......+..+.|| +++|....+..+.++|+++
T Consensus 139 ~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~ 217 (285)
T 3kea_A 139 LNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKY 217 (285)
T ss_dssp TTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTS
T ss_pred cCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHc
Confidence 88888888888888776322 27888888885 4577777743322223345566676 8888888888888888876
Q ss_pred CCCCCCC
Q psy6441 241 QNRTHQT 247 (464)
Q Consensus 241 ~~~~~~~ 247 (464)
+......
T Consensus 218 gad~~~~ 224 (285)
T 3kea_A 218 DINIYSA 224 (285)
T ss_dssp CBCSTTT
T ss_pred CCCCCCC
Confidence 6554443
No 59
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.89 E-value=1.5e-23 Score=205.06 Aligned_cols=158 Identities=18% Similarity=0.136 Sum_probs=142.0
Q ss_pred hcCCCCCcchhhhhhcCChhhhhcchhhcCC-CcccccchhhhHHHHHH-----hcCCHHHHHHHHHCCCCcccccCCCC
Q psy6441 82 SQMPDGHGSIVNGMENTHLNSARLPFSVLGV-SDMDRVKYLEEQLREAS-----CLGDFEAVCELVSKGIDINAQHDMNG 155 (464)
Q Consensus 82 ~~~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga-~~~~~d~~G~TpLh~Aa-----~~G~~eiVk~LL~~Gadvn~~dd~~G 155 (464)
..+..|.||||+|+..|+.++|++|++. |+ +++..+..|+||||+|+ ..++.+++++|++.|++++..+ ..|
T Consensus 106 ~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~-~~g 183 (276)
T 4hbd_A 106 IADSNGNTALHYSVSHANFPVVQQLLDS-GVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKAS-QAG 183 (276)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHT-SCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCT-TTC
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccC-CCC
Confidence 4468999999999999999999999999 76 99999999999999999 6689999999999999998885 489
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCc-ccCCCCCCCcccccCCCCcH
Q psy6441 156 WTALHWAAKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVT-INTADLPIVPNYIKNEPLDP 231 (464)
Q Consensus 156 ~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~-~~~~~~~~tpl~laa~~~h~ 231 (464)
+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+ +.+++++|....+++ ...+..+.||+++|...++.
T Consensus 184 ~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~ 263 (276)
T 4hbd_A 184 QTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQS 263 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCH
Confidence 99999999999999999999999999999999999999996 568888886633333 55677889999999999999
Q ss_pred HHHHHHHhCC
Q psy6441 232 RVNDYQVSNQ 241 (464)
Q Consensus 232 a~~~~l~sn~ 241 (464)
++.++|++..
T Consensus 264 ~iv~~Ll~~~ 273 (276)
T 4hbd_A 264 EIASMLYSRM 273 (276)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcc
Confidence 9999988654
No 60
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.89 E-value=4.6e-23 Score=185.87 Aligned_cols=154 Identities=23% Similarity=0.204 Sum_probs=132.9
Q ss_pred CCChHhHHHHHHHhcCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHHHHhcCCCCCcchhhhhhcCChhhhhcchh
Q psy6441 29 ELTYYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLSQMPDGHGSIVNGMENTHLNSARLPFS 108 (464)
Q Consensus 29 ~l~~~~lL~i~c~~~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~ll~~~~~g~TpLh~Aa~~G~~~iVk~LL~ 108 (464)
.....++++.|++...++.++.+.....-. ...+..|.||||+|+..|+.+++++|++
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~----------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 68 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADV----------------------NAEDASGWTPLHLAAFNGHLEIVEVLLK 68 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCT----------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCC----------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 344567888888888887666555432111 1235689999999999999999999999
Q ss_pred hcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Q psy6441 109 VLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKE 188 (464)
Q Consensus 109 ~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G 188 (464)
. |++++..+..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 69 ~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 146 (169)
T 2y1l_E 69 N-GADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDM-EGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFG 146 (169)
T ss_dssp T-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred c-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 9 999999999999999999999999999999999999999954 99999999999999999999999999999999999
Q ss_pred CchhHhhc---cHHHHHHHhC
Q psy6441 189 ETPLALAT---KPEVRILLGG 206 (464)
Q Consensus 189 ~TPLh~A~---~~~i~~LL~~ 206 (464)
.||||+|+ +.+++++|..
T Consensus 147 ~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 147 KTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHT
T ss_pred CCHHHHHHHhCCHHHHHHHHH
Confidence 99999996 5688888843
No 61
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.89 E-value=7.1e-24 Score=184.70 Aligned_cols=120 Identities=15% Similarity=0.170 Sum_probs=113.4
Q ss_pred cCCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCC-CCcHHHH
Q psy6441 83 QMPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMN-GWTALHW 161 (464)
Q Consensus 83 ~~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~-G~TpLH~ 161 (464)
.+..|.||||+|+..|+.+++++|++. |++++.++..|+||||+|+. |+.+++++|+++|++++.++. . |+||||+
T Consensus 8 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~-~~g~t~L~~ 84 (136)
T 1d9s_A 8 LGGSSDAGLATAAARGQVETVRQLLEA-GADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADP-ATLTRPVHD 84 (136)
T ss_dssp CCCCCSCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBT-TTTBCHHHH
T ss_pred CCCCCccHHHHHHHcCCHHHHHHHHHc-CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCC-CCCCCHHHH
Confidence 457899999999999999999999999 99999999999999999999 999999999999999999966 7 9999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHh
Q psy6441 162 AAKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLG 205 (464)
Q Consensus 162 Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~ 205 (464)
|+..|+.+++++|+++|++++.+|..|+||||+|+ +.+++++|.
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll 131 (136)
T 1d9s_A 85 AAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLH 131 (136)
T ss_dssp HHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999999999999999999999999999996 567888773
No 62
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.89 E-value=2.3e-23 Score=186.62 Aligned_cols=149 Identities=19% Similarity=0.169 Sum_probs=128.6
Q ss_pred hHhHHHHHHHhcCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHHHHhcCCCCCcchhhhhhcCChhhhhcchhhcC
Q psy6441 32 YYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLSQMPDGHGSIVNGMENTHLNSARLPFSVLG 111 (464)
Q Consensus 32 ~~~lL~i~c~~~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~ll~~~~~g~TpLh~Aa~~G~~~iVk~LL~~~g 111 (464)
+.++++.|+....++.++.+...... +...+..|.||||+|+..|+.+++++|++. |
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~----------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g 59 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENV----------------------INHTDEEGFTPLMWAAAHGQIAVVEFLLQN-G 59 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSC----------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-T
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCC----------------------cCCCCCCCCCHHHHHHHCCCHHHHHHHHHc-C
Confidence 34567777777776655544432211 122356899999999999999999999999 9
Q ss_pred CCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCch
Q psy6441 112 VSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKEETP 191 (464)
Q Consensus 112 a~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TP 191 (464)
++++..+..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..|+||
T Consensus 60 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 138 (167)
T 3v31_A 60 ADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDW-NGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNS 138 (167)
T ss_dssp CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 99999999999999999999999999999999999999954 99999999999999999999999999999999999999
Q ss_pred hHhhc---cHHHHHHH
Q psy6441 192 LALAT---KPEVRILL 204 (464)
Q Consensus 192 Lh~A~---~~~i~~LL 204 (464)
||+|+ +.+++++|
T Consensus 139 l~~A~~~~~~~~~~~L 154 (167)
T 3v31_A 139 MDLAVALGYRSVQQVI 154 (167)
T ss_dssp HHHHHHHTCHHHHHHH
T ss_pred HHHHHHcCcHHHHHHH
Confidence 99996 56788777
No 63
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=6.5e-24 Score=189.24 Aligned_cols=138 Identities=18% Similarity=0.192 Sum_probs=113.6
Q ss_pred cCCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCc-HHHH
Q psy6441 83 QMPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWT-ALHW 161 (464)
Q Consensus 83 ~~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~T-pLH~ 161 (464)
.+..|.||||+|+..|+.+++++|++. |++++..+..|+||||+|+ .|+.+++++|+++|++++.++. .|+| |||+
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~-~g~ttpL~~ 84 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEA-GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADP-ATLTRPVHD 84 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTT-TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCT-TTCCCHHHH
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHH
Confidence 356899999999999999999999999 9999999999999999985 9999999999999999999955 9999 9999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCccc
Q psy6441 162 AAKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNY 223 (464)
Q Consensus 162 Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~ 223 (464)
|+..|+.+++++|+++|++++.+|..|+||||+|+ +.+++++|...+......+..+.||..
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred HHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence 99999999999999999999999999999999996 568888885444333444444555443
No 64
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.89 E-value=6.2e-24 Score=208.57 Aligned_cols=162 Identities=17% Similarity=0.094 Sum_probs=142.3
Q ss_pred hcCCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHH
Q psy6441 82 SQMPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHW 161 (464)
Q Consensus 82 ~~~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~ 161 (464)
..+..|.||||+|+..|+.+++++|++. |++++..+ |+||||+|+..|+.+++++|+++|++++.++. .|+||||+
T Consensus 26 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~t~L~~ 101 (285)
T 3kea_A 26 KADVHGHSASYYAIADNNVRLVCTLLNA-GALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDD-KGNTALYY 101 (285)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHT-TGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCT-TSCCHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCcHHHH
Confidence 4457899999999999999999999999 99998884 89999999999999999999999999999955 99999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCC-CchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHH
Q psy6441 162 AAKRGQKDIVSYLLKHGADKSLLTSKE-ETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQ 237 (464)
Q Consensus 162 Aa~~G~~eiv~lLL~~GAdin~~D~~G-~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l 237 (464)
|+..|+.+++++|+++|++++.+|..| .||||+|+ +.+++++|...+.. ......+.||+++|+..++..+.++|
T Consensus 102 A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~g~t~L~~A~~~g~~~~v~~L 180 (285)
T 3kea_A 102 AVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS-TFDLAILLSCIHITIKNGHVDMMILL 180 (285)
T ss_dssp HHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCT-TCCCSTHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCc-cccccCCccHHHHHHHcChHHHHHHH
Confidence 999999999999999999999999999 79999996 56888888544332 22223778999999999999999999
Q ss_pred HhCCCCCCCCC
Q psy6441 238 VSNQNRTHQTN 248 (464)
Q Consensus 238 ~sn~~~~~~~~ 248 (464)
++++.....+.
T Consensus 181 l~~gad~n~~~ 191 (285)
T 3kea_A 181 LDYMTSTNTNN 191 (285)
T ss_dssp HHHHHHTCTTC
T ss_pred HHcCCCCCccc
Confidence 98766554444
No 65
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.89 E-value=3.4e-23 Score=184.03 Aligned_cols=149 Identities=21% Similarity=0.201 Sum_probs=128.7
Q ss_pred hHhHHHHHHHhcCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHHHHhcCCCCCcchhhhhhcCChhhhhcchhhcC
Q psy6441 32 YYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLSQMPDGHGSIVNGMENTHLNSARLPFSVLG 111 (464)
Q Consensus 32 ~~~lL~i~c~~~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~ll~~~~~g~TpLh~Aa~~G~~~iVk~LL~~~g 111 (464)
+.++++.|+....++.++.+.....- +...+..|.||||+|+. |+.+++++|++. |
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~----------------------~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-g 60 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVN----------------------VNAQNGFGRTALQVMKL-GNPEIARRLLLR-G 60 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCC----------------------TTCCCTTSCCHHHHCCS-SCHHHHHHHHHT-T
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCC----------------------ccccCccCccHHHHHHc-CcHHHHHHHHHc-C
Confidence 56788888888877655554432110 11235689999999999 999999999999 9
Q ss_pred CCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCc
Q psy6441 112 VSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGAD-KSLLTSKEET 190 (464)
Q Consensus 112 a~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAd-in~~D~~G~T 190 (464)
++++.++..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++ ++.+|..|+|
T Consensus 61 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t 139 (162)
T 1ihb_A 61 ANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDN-EGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDT 139 (162)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCC
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCc
Confidence 99999999999999999999999999999999999999955 999999999999999999999999998 6999999999
Q ss_pred hhHhhc---cHHHHHHHh
Q psy6441 191 PLALAT---KPEVRILLG 205 (464)
Q Consensus 191 PLh~A~---~~~i~~LL~ 205 (464)
|||+|+ +.+++++|.
T Consensus 140 ~l~~A~~~~~~~~~~~Ll 157 (162)
T 1ihb_A 140 ACDLARLYGRNEVVSLMQ 157 (162)
T ss_dssp HHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHH
Confidence 999996 568888874
No 66
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.89 E-value=4.9e-23 Score=192.62 Aligned_cols=210 Identities=14% Similarity=0.018 Sum_probs=159.2
Q ss_pred ChHhHHHHHHHhcCCCCHHHHHHhcCC---chhhhccchhHHHHhhhHHHHHHHhcC---------CCCCcchhhhhhcC
Q psy6441 31 TYYSLLNICCKELNIDSPQTILKIRKL---PNTIIRKDKDVARLTMFQEIELVLSQM---------PDGHGSIVNGMENT 98 (464)
Q Consensus 31 ~~~~lL~i~c~~~~i~~~~~l~~~~~l---~~~~~~~~~~~a~l~~~~ei~~ll~~~---------~~g~TpLh~Aa~~G 98 (464)
.+..+++.|++...++.++.+.....- .+....+..+.+...+..++...+.+. ..|.||||+|+..|
T Consensus 8 ~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~ 87 (240)
T 3eu9_A 8 YSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQG 87 (240)
T ss_dssp GGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHT
T ss_pred ccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcC
Confidence 345678889998888877777664422 222334566777666655555444332 23788999999999
Q ss_pred ChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCC-HHHHHHHHHC
Q psy6441 99 HLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQ-KDIVSYLLKH 177 (464)
Q Consensus 99 ~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~-~eiv~lLL~~ 177 (464)
+.+++++|++. |++++..+..|.||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..++ .+++++|++.
T Consensus 88 ~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~~L~~~ 165 (240)
T 3eu9_A 88 HLSMVVQLMKY-GADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQ-NGMTPLMWAAYRTHSVDPTRLLLTF 165 (240)
T ss_dssp CHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHCCSSTTHHHHHHT
T ss_pred CHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCC-CCCcHHHHHHHhCChHHHHHHHHhc
Confidence 99999999888 888888888899999999999999999999999999888854 88899999987666 7888899999
Q ss_pred CCCCCCCCC-CCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhCCC
Q psy6441 178 GADKSLLTS-KEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSNQN 242 (464)
Q Consensus 178 GAdin~~D~-~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn~~ 242 (464)
|++++..+. .|.||||+|+ +.+++++|...+......+..+.||+++|....+..+.+++..++.
T Consensus 166 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~ 234 (240)
T 3eu9_A 166 NVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQ 234 (240)
T ss_dssp TCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC-
T ss_pred CCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhh
Confidence 999988886 8889999986 4567777643333334456677889999988888888888876544
No 67
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.89 E-value=1.5e-22 Score=201.68 Aligned_cols=214 Identities=20% Similarity=0.132 Sum_probs=172.4
Q ss_pred CChHhHHHHHHHhcCCCCHHHHHHhcCCch----hhhccchhHHHHhhhHHHHHHHhc----------------------
Q psy6441 30 LTYYSLLNICCKELNIDSPQTILKIRKLPN----TIIRKDKDVARLTMFQEIELVLSQ---------------------- 83 (464)
Q Consensus 30 l~~~~lL~i~c~~~~i~~~~~l~~~~~l~~----~~~~~~~~~a~l~~~~ei~~ll~~---------------------- 83 (464)
..+.++|+.|++...++.++.++....-++ ....++++.|...+..++..+|.+
T Consensus 23 ~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 102 (337)
T 4g8k_A 23 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIA 102 (337)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhc
Confidence 346789999999999998888887654332 224567888888877777665532
Q ss_pred -------------------CCCCCcchhhhhhcCChhhhhcchhhcCCCcccc----------cchhhhHHHHHHhcCCH
Q psy6441 84 -------------------MPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDR----------VKYLEEQLREASCLGDF 134 (464)
Q Consensus 84 -------------------~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~----------d~~G~TpLh~Aa~~G~~ 134 (464)
+..|.||||+|+..|+.+++++|++. |++++.. +..|.||||+|+..|+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~-ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~ 181 (337)
T 4g8k_A 103 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR-GANVNLRRKTKEDQERLRKGGATALMDAAEKGHV 181 (337)
T ss_dssp TCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCCCC-----CTTCSCCHHHHHHHHTCH
T ss_pred ccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHc-CCCcchhhccccccccccCCCCcHHHHHHHCCCH
Confidence 35788999999999999999999998 8887654 34689999999999999
Q ss_pred HHHHHHHH-CCCCcccccCCCCCcHHHHHHHcCC----HHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhC
Q psy6441 135 EAVCELVS-KGIDINAQHDMNGWTALHWAAKRGQ----KDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGG 206 (464)
Q Consensus 135 eiVk~LL~-~Gadvn~~dd~~G~TpLH~Aa~~G~----~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~ 206 (464)
++|++||+ .|++++.++. .|+|+||+++..++ ..++++|+++|++++.+|..|+||||+|+ +.+++++|..
T Consensus 182 ~~v~~LL~~~gad~n~~d~-~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~ 260 (337)
T 4g8k_A 182 EVLKILLDEMGADVNACDN-MGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE 260 (337)
T ss_dssp HHHHHHHHHSCCCTTCCCT-TSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHhccCCCcCccCC-CCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHH
Confidence 99999996 5999999955 99999999887654 46889999999999999999999999996 4566666654
Q ss_pred CCCCc-ccCCCCCCCcccccCCCCcHHHHHHHHhCCCCCC
Q psy6441 207 EPGVT-INTADLPIVPNYIKNEPLDPRVNDYQVSNQNRTH 245 (464)
Q Consensus 207 ~~~~~-~~~~~~~~tpl~laa~~~h~a~~~~l~sn~~~~~ 245 (464)
..+.+ ...+..|.||+++|+..++..++++|+.+++...
T Consensus 261 ~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n 300 (337)
T 4g8k_A 261 QEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 300 (337)
T ss_dssp STTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSST
T ss_pred hcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 43333 5567788999999999999999999998776543
No 68
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.89 E-value=1.9e-23 Score=181.99 Aligned_cols=119 Identities=26% Similarity=0.333 Sum_probs=112.9
Q ss_pred CCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHH
Q psy6441 85 PDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAK 164 (464)
Q Consensus 85 ~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~ 164 (464)
..+.||||+|+..|+.+++++|++. |++++..|..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+.
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~ 89 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMAN-GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDA-IGFTPLHLAAF 89 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCCCHHHHHHH
Confidence 4678999999999999999999999 999999999999999999999999999999999999999965 99999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHh
Q psy6441 165 RGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLG 205 (464)
Q Consensus 165 ~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~ 205 (464)
.|+.+++++|+++|++++.+|..|+||||+|+ +.+++++|.
T Consensus 90 ~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll 133 (136)
T 2jab_A 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQ 133 (136)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 99999999999999999999999999999996 568888874
No 69
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.89 E-value=7.7e-23 Score=187.81 Aligned_cols=163 Identities=14% Similarity=0.085 Sum_probs=142.8
Q ss_pred CCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHH
Q psy6441 85 PDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAK 164 (464)
Q Consensus 85 ~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~ 164 (464)
..+.||||.|+..|+.+.++.|+...+.+++..|..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~ 81 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNS-ISDSPYLYAGA 81 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHH
Confidence 46889999999999999999999996669999999999999999999999999999999999999955 99999999999
Q ss_pred cCCHHHHHHHH-HCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCC-CCcccCCCCCCCcccccCCCCc-----HHHH
Q psy6441 165 RGQKDIVSYLL-KHGADKSLLTSKEETPLALAT---KPEVRILLGGEP-GVTINTADLPIVPNYIKNEPLD-----PRVN 234 (464)
Q Consensus 165 ~G~~eiv~lLL-~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~-~~~~~~~~~~~tpl~laa~~~h-----~a~~ 234 (464)
.|+.+++++|+ ..+++++..|..|.||||+|+ +.+++++|...+ ......+..+.||++.+..... ..+.
T Consensus 82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v 161 (201)
T 3hra_A 82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIV 161 (201)
T ss_dssp TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHH
Confidence 99999999999 568899999999999999996 567777775444 3335566778999999987766 8899
Q ss_pred HHHHhCCCCCCCCC
Q psy6441 235 DYQVSNQNRTHQTN 248 (464)
Q Consensus 235 ~~l~sn~~~~~~~~ 248 (464)
++|+..+.....+.
T Consensus 162 ~~Ll~~ga~~~~~~ 175 (201)
T 3hra_A 162 KLLMENGADQSIKD 175 (201)
T ss_dssp HHHHHTTCCTTCCC
T ss_pred HHHHHCCCCCCccC
Confidence 99998876655544
No 70
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.89 E-value=5.8e-24 Score=216.54 Aligned_cols=161 Identities=18% Similarity=0.132 Sum_probs=105.2
Q ss_pred CCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCC---CCcccccCCCCCcHHHH
Q psy6441 85 PDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKG---IDINAQHDMNGWTALHW 161 (464)
Q Consensus 85 ~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~G---advn~~dd~~G~TpLH~ 161 (464)
..|.||||+|+..|+.++|++|++. |++++..+..|+||||+|+..|+.+++++|+++| ++++..+. .|+||||+
T Consensus 164 ~~g~TpL~~A~~~g~~~iv~~Ll~~-ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~-~g~t~L~~ 241 (373)
T 2fo1_E 164 CDENTPLMLAVLARRRRLVAYLMKA-GADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDR-NGMTALMI 241 (373)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCT-TSCCHHHH
T ss_pred CCCCCHHHHHHHcChHHHHHHHHHC-CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCC-CCCCHHHH
Confidence 5667777777777777777777776 7777777777777777777777777777777665 66666643 67777777
Q ss_pred HHHcC---CHHHHHHHHHCCCCCCC--------CCCCCCchhHhhc---cHHHHHHHhCCC-CCcccCCCCCCCcccccC
Q psy6441 162 AAKRG---QKDIVSYLLKHGADKSL--------LTSKEETPLALAT---KPEVRILLGGEP-GVTINTADLPIVPNYIKN 226 (464)
Q Consensus 162 Aa~~G---~~eiv~lLL~~GAdin~--------~D~~G~TPLh~A~---~~~i~~LL~~~~-~~~~~~~~~~~tpl~laa 226 (464)
|+..| +.+++++|+++|++++. .|..|+||||+|+ +.+++++|.... ......+..+.||+++|+
T Consensus 242 A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~ 321 (373)
T 2fo1_E 242 VAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAA 321 (373)
T ss_dssp HHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHH
T ss_pred HHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHH
Confidence 77666 66777777777777664 4556777777774 455666654322 222344556667777777
Q ss_pred CCCcHHHHHHHHhCCCCCCCC
Q psy6441 227 EPLDPRVNDYQVSNQNRTHQT 247 (464)
Q Consensus 227 ~~~h~a~~~~l~sn~~~~~~~ 247 (464)
..++..++++|+.++.....+
T Consensus 322 ~~g~~~iv~~Ll~~gad~~~~ 342 (373)
T 2fo1_E 322 QEGRIEVVMYLIQQGASVEAV 342 (373)
T ss_dssp HHTCHHHHHHHHHTTCCSSCC
T ss_pred HcCCHHHHHHHHHcCCCccCC
Confidence 777777777777665544443
No 71
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.89 E-value=1.8e-22 Score=183.33 Aligned_cols=120 Identities=21% Similarity=0.193 Sum_probs=113.3
Q ss_pred CCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHH
Q psy6441 84 MPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAA 163 (464)
Q Consensus 84 ~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa 163 (464)
+..|.||||+|+..|+.+++++|++. |++++..+..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+
T Consensus 36 ~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~ 113 (179)
T 3f6q_A 36 DDHGFSPLHWACREGRSAVVEMLIMR-GARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNE-HGNVPLHYAC 113 (179)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHH
Confidence 46899999999999999999999999 999999999999999999999999999999999999999964 9999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHh
Q psy6441 164 KRGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLG 205 (464)
Q Consensus 164 ~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~ 205 (464)
..|+.+++++|+++|++++.+|..|+||||+|+ +.+++++|.
T Consensus 114 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~ 158 (179)
T 3f6q_A 114 FWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAE 158 (179)
T ss_dssp HTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 446777773
No 72
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.88 E-value=1.6e-22 Score=178.92 Aligned_cols=149 Identities=19% Similarity=0.168 Sum_probs=127.9
Q ss_pred hHhHHHHHHHhcCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHHHHhcCCCCCcchhhhhhcCChhhhhcchhhcC
Q psy6441 32 YYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLSQMPDGHGSIVNGMENTHLNSARLPFSVLG 111 (464)
Q Consensus 32 ~~~lL~i~c~~~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~ll~~~~~g~TpLh~Aa~~G~~~iVk~LL~~~g 111 (464)
+.++++.|+....++.++.+....... +...+..|.||||+ +..|+.+++++|++. |
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~---------------------~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~-g 58 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVH---------------------PDALNRFGKTALQV-MMFGSTAIALELLKQ-G 58 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCC---------------------TTCCCTTSCCHHHH-SCTTCHHHHHHHHHT-T
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcC---------------------ccccCCCCCcHHHH-HHcCCHHHHHHHHHC-C
Confidence 456777787777776555554431000 01234679999999 999999999999999 9
Q ss_pred CCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCch
Q psy6441 112 VSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKEETP 191 (464)
Q Consensus 112 a~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TP 191 (464)
++++.+|..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++ ++++.+|..|+||
T Consensus 59 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~ 136 (156)
T 1bd8_A 59 ASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDG-TGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTP 136 (156)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCH
T ss_pred CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCH
Confidence 99999999999999999999999999999999999999965 999999999999999999999999 9999999999999
Q ss_pred hHhhc---cHHHHHHHh
Q psy6441 192 LALAT---KPEVRILLG 205 (464)
Q Consensus 192 Lh~A~---~~~i~~LL~ 205 (464)
||+|+ +.+++++|.
T Consensus 137 l~~A~~~~~~~~v~~Ll 153 (156)
T 1bd8_A 137 LELALQRGAQDLVDILQ 153 (156)
T ss_dssp HHHHHHSCCHHHHHHHH
T ss_pred HHHHHHcCcHHHHHHHH
Confidence 99996 678888874
No 73
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.88 E-value=4.6e-23 Score=196.83 Aligned_cols=157 Identities=21% Similarity=0.175 Sum_probs=103.5
Q ss_pred CCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHc
Q psy6441 86 DGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKR 165 (464)
Q Consensus 86 ~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~ 165 (464)
.|.||||.|++.|+.++++.|+++ |++++.. ..|.||||+|+..|+.+++++|++.|++++.++. .|+||||+||..
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~-g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~ 80 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAH-GMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPND-EGITALHNAVCA 80 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCT-TSCCHHHHHHHH
T ss_pred cccccCchhhhhhhHHHHHHHhcc-CCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHc
Confidence 689999999999999999999999 9998865 6789999999999999999999999999999955 899999999999
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHh-CCCCCcccCCCCCCCccccc--CCCCcHHHHHHHHh
Q psy6441 166 GQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLG-GEPGVTINTADLPIVPNYIK--NEPLDPRVNDYQVS 239 (464)
Q Consensus 166 G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~-~~~~~~~~~~~~~~tpl~la--a~~~h~a~~~~l~s 239 (464)
|+.+++++|+++|++++.+|..|+||||+|+ +.+++++|. .+.+........+.||++++ ...++..+.++|+.
T Consensus 81 g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~ 160 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG 160 (239)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHH
Confidence 9999999999999999999999999999996 567777774 44444444444445999998 77788889998887
Q ss_pred CCCCCC
Q psy6441 240 NQNRTH 245 (464)
Q Consensus 240 n~~~~~ 245 (464)
.+....
T Consensus 161 ~~a~~~ 166 (239)
T 1ycs_B 161 VQEKMG 166 (239)
T ss_dssp HHHHTT
T ss_pred hhhccc
Confidence 654433
No 74
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.88 E-value=1.5e-22 Score=171.17 Aligned_cols=118 Identities=34% Similarity=0.427 Sum_probs=112.0
Q ss_pred CCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHc
Q psy6441 86 DGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKR 165 (464)
Q Consensus 86 ~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~ 165 (464)
+|.||||+|+..|+.+++++|++. |++++..+..|.||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~l~~A~~~ 78 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARN 78 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCC-CCCcHHHHHHHc
Confidence 589999999999999999999999 999999999999999999999999999999999999999955 999999999999
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHh
Q psy6441 166 GQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLG 205 (464)
Q Consensus 166 G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~ 205 (464)
|+.+++++|+++|++++.+|..|+||||+|+ +.+++++|.
T Consensus 79 ~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 121 (126)
T 1n0r_A 79 GHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121 (126)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 9999999999999999999999999999996 567777773
No 75
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.88 E-value=1.3e-22 Score=188.25 Aligned_cols=149 Identities=13% Similarity=0.036 Sum_probs=125.6
Q ss_pred CCcchhhhhhcCChhhhhcchhhcCCCccccc-chhhhHHHHHHhcCCH----HHHHHHHHCCCCcccccCCCCCcHHHH
Q psy6441 87 GHGSIVNGMENTHLNSARLPFSVLGVSDMDRV-KYLEEQLREASCLGDF----EAVCELVSKGIDINAQHDMNGWTALHW 161 (464)
Q Consensus 87 g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d-~~G~TpLh~Aa~~G~~----eiVk~LL~~Gadvn~~dd~~G~TpLH~ 161 (464)
+.++|+.|++.|+.+.++.++.. + ++..+ ..|+||||+|+..|+. +++++|+++|+++|.++ ..|+||||+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~-~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d-~~g~TpLh~ 81 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEK-G--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRT-KEGTTLFFP 81 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHH-S--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCC-TTCCCTHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhc-C--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCC-CCCCcHHHH
Confidence 56889999999999999998877 4 45555 7899999999999975 58999999999999996 499999999
Q ss_pred HHHcCC------HHHHHHHHHCCCCCCCCCCCCC-chhHhhcc--------HHHHHHHhC-CCCCcccCCCCCCCccccc
Q psy6441 162 AAKRGQ------KDIVSYLLKHGADKSLLTSKEE-TPLALATK--------PEVRILLGG-EPGVTINTADLPIVPNYIK 225 (464)
Q Consensus 162 Aa~~G~------~eiv~lLL~~GAdin~~D~~G~-TPLh~A~~--------~~i~~LL~~-~~~~~~~~~~~~~tpl~la 225 (464)
|+..|+ .+++++|+++|||+|.+|..|+ ||||+|+. .+++++|.. .+......+..|.||+++|
T Consensus 82 a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A 161 (186)
T 3t8k_A 82 LFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFV 161 (186)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHH
Confidence 999987 6789999999999999999999 99999975 357777765 3333356677888999999
Q ss_pred CCCCcHHHHHHHHh
Q psy6441 226 NEPLDPRVNDYQVS 239 (464)
Q Consensus 226 a~~~h~a~~~~l~s 239 (464)
....+..++++|..
T Consensus 162 ~~~~~~~~v~~L~~ 175 (186)
T 3t8k_A 162 KRCQKPIALKMMED 175 (186)
T ss_dssp HTTTCHHHHHHHHH
T ss_pred HHcCCHHHHHHHHH
Confidence 99999988887663
No 76
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.88 E-value=2.6e-23 Score=199.01 Aligned_cols=157 Identities=19% Similarity=0.099 Sum_probs=133.6
Q ss_pred CCcchhhhhhcCChhhhhcchh----hcCCCccc----ccchhhhHHHHHHhc---CCHHHHHHHHHCCCCccccc----
Q psy6441 87 GHGSIVNGMENTHLNSARLPFS----VLGVSDMD----RVKYLEEQLREASCL---GDFEAVCELVSKGIDINAQH---- 151 (464)
Q Consensus 87 g~TpLh~Aa~~G~~~iVk~LL~----~~ga~~~~----~d~~G~TpLh~Aa~~---G~~eiVk~LL~~Gadvn~~d---- 151 (464)
|+||||+|+..|+.++|+.|++ . |++++. .|..|+||||+|+.. |+.+++++|++.|++++..+
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~-g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWN-SKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHH-TCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHc-CCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 7899999999999987765554 6 999998 899999999999999 99999999999998876432
Q ss_pred ------CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-------------CCchhHhhc---cHHHHHHHhC---
Q psy6441 152 ------DMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSK-------------EETPLALAT---KPEVRILLGG--- 206 (464)
Q Consensus 152 ------d~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~-------------G~TPLh~A~---~~~i~~LL~~--- 206 (464)
+..|+||||+|+..|+.+++++|+++|++++.+|.. |+||||+|+ +.+++++|..
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 160 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH 160 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 247999999999999999999999999999999987 999999996 5688888865
Q ss_pred CCCCcccCCCCCCCcccccCC--CCcHH-------HHHHHHhCCCCC
Q psy6441 207 EPGVTINTADLPIVPNYIKNE--PLDPR-------VNDYQVSNQNRT 244 (464)
Q Consensus 207 ~~~~~~~~~~~~~tpl~laa~--~~h~a-------~~~~l~sn~~~~ 244 (464)
.+......+..+.||+++|+. ..+.+ +.++|+..+...
T Consensus 161 ~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 161 QPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence 333335567789999999987 77877 888888765444
No 77
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.87 E-value=6.2e-23 Score=197.20 Aligned_cols=139 Identities=19% Similarity=0.108 Sum_probs=127.7
Q ss_pred CCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHc
Q psy6441 86 DGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKR 165 (464)
Q Consensus 86 ~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~ 165 (464)
.|.||||+|+..|+.++++.|++ |++++.+|..|+||||+|+..|+.++|++|+++|++++.+++..|+||||+|+..
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 68899999999999999999999 8999999999999999999999999999999999999999756899999999999
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCchhHhhccHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhC
Q psy6441 166 GQKDIVSYLLKHGADKSLLTSKEETPLALATKPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSN 240 (464)
Q Consensus 166 G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn 240 (464)
|+.+++++|+++|++++.+|..|+||||+|+. ++ ....+.+|+++++..++..+.+++...
T Consensus 122 g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~-----~~---------~~~~~~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 122 VRPEVVEALVELGADIEVEDERGLTALELARE-----IL---------KTTPKGNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH-----HH---------TTCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH-----HH---------hccCCCCHHHHHHHcChHHHHHHHHHh
Confidence 99999999999999999999999999999974 22 124456999999999999999988854
No 78
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.87 E-value=6.2e-23 Score=187.86 Aligned_cols=138 Identities=18% Similarity=0.077 Sum_probs=121.9
Q ss_pred CCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHH
Q psy6441 85 PDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAK 164 (464)
Q Consensus 85 ~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~ 164 (464)
..|.||||+|+..|+.++++.|++ |++++..|..|+||||+|+..|+.+++++|+++|++++.+++..|+||||+|+.
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 367899999999999999999998 889999999999999999999999999999999999999975699999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCchhHhhccHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHH
Q psy6441 165 RGQKDIVSYLLKHGADKSLLTSKEETPLALATKPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQV 238 (464)
Q Consensus 165 ~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~ 238 (464)
.|+.+++++|+++|++++.+|..|+||||+|+... ......+++.+++..++..+.+.|.
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~--------------~~~~~~~~l~~a~~~~~~~i~~~L~ 179 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVEDERGLTALELAREIL--------------KTTPKGNPMQFGRRIGLEKVINVLE 179 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHH--------------HTCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhc--------------cCcccccHHHHHHHcCHHHHHHHHH
Confidence 99999999999999999999999999999997421 1123347777777777777766665
No 79
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.87 E-value=7.1e-24 Score=202.47 Aligned_cols=185 Identities=16% Similarity=0.035 Sum_probs=123.8
Q ss_pred CCChHhHHHHHHHhcCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHHHHhcCCCCCcchhhhhhcCChhhhhcchh
Q psy6441 29 ELTYYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLSQMPDGHGSIVNGMENTHLNSARLPFS 108 (464)
Q Consensus 29 ~l~~~~lL~i~c~~~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~ll~~~~~g~TpLh~Aa~~G~~~iVk~LL~ 108 (464)
..++.++++.|+....++.++.+.....-. ...+..|.||||+|+..|+.+++++|++
T Consensus 18 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~----------------------~~~d~~g~tpLh~A~~~g~~~~v~~Ll~ 75 (229)
T 2vge_A 18 RLNPLVLLLDAALTGELEVVQQAVKEMNDP----------------------SQPNEEGITALHNAICGANYSIVDFLIT 75 (229)
T ss_dssp TSCHHHHHHHHHHHTCHHHHHHHHHHSSCT----------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ccchhHHHHHHHHcCCHHHHHHHHhcCCCC----------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 445667777777776665555444322111 1124567777777777777777777777
Q ss_pred hcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHH--HHcCCHHHHHHHHHCCCCCCCCCC
Q psy6441 109 VLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWA--AKRGQKDIVSYLLKHGADKSLLTS 186 (464)
Q Consensus 109 ~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~A--a~~G~~eiv~lLL~~GAdin~~D~ 186 (464)
. |++++..|..|+||||+|+..|+.+++++|+++|++++.+++..|+||||+| +..|+.+++++|+++|++++.+|.
T Consensus 76 ~-ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~ 154 (229)
T 2vge_A 76 A-GANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNS 154 (229)
T ss_dssp T-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGG
T ss_pred C-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccC
Confidence 7 7777777777777777777777777777777777777776545777777777 777777777777777777777777
Q ss_pred CCCchhHhhccHHHHHHHhCCC-CC-cccCCCCCCCcccccCCCCcHHHHHH
Q psy6441 187 KEETPLALATKPEVRILLGGEP-GV-TINTADLPIVPNYIKNEPLDPRVNDY 236 (464)
Q Consensus 187 ~G~TPLh~A~~~~i~~LL~~~~-~~-~~~~~~~~~tpl~laa~~~h~a~~~~ 236 (464)
.|.||++.++.....++|...+ .. ....+..|.||+++|+..++.++++.
T Consensus 155 ~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~ 206 (229)
T 2vge_A 155 GAVYALWDYSAEFGDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPR 206 (229)
T ss_dssp GEEEESSCBCCSSTTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred CchHHHHHHhhccccccCccccccccccccCCCcccHHHHHHHcCCcceeeh
Confidence 7777777555433334442222 22 14456678899999988888776553
No 80
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.87 E-value=7.6e-23 Score=195.32 Aligned_cols=141 Identities=17% Similarity=0.148 Sum_probs=121.6
Q ss_pred CCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHH
Q psy6441 85 PDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAK 164 (464)
Q Consensus 85 ~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~ 164 (464)
.++.||||+|+..|+.+++++|++. |++++..|..|+||||+|+..|+.+++++|+++|++++.+|. .|+||||+|+.
T Consensus 19 ~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~-~g~tpLh~A~~ 96 (229)
T 2vge_A 19 LNPLVLLLDAALTGELEVVQQAVKE-MNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDS-HGWTPLHCAAS 96 (229)
T ss_dssp SCHHHHHHHHHHHTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHH
T ss_pred cchhHHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHH
Confidence 4677899999999999999999998 999999999999999999999999999999999999999965 99999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCC-CCCCchhHhh--c---cHHHHHHHhCCCCCcccCCCCCCCcccccCC
Q psy6441 165 RGQKDIVSYLLKHGADKSLLT-SKEETPLALA--T---KPEVRILLGGEPGVTINTADLPIVPNYIKNE 227 (464)
Q Consensus 165 ~G~~eiv~lLL~~GAdin~~D-~~G~TPLh~A--~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~ 227 (464)
.|+.+++++|+++|++++.++ ..|+||||+| + +.+++++|...+......+..+.++++..+.
T Consensus 97 ~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~ 165 (229)
T 2vge_A 97 CNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSA 165 (229)
T ss_dssp TTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCC
T ss_pred cCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhh
Confidence 999999999999999999997 6999999999 4 5678888743222222234455677775444
No 81
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.87 E-value=1.2e-21 Score=183.15 Aligned_cols=184 Identities=18% Similarity=0.123 Sum_probs=149.3
Q ss_pred ccchhHHHHhhhHHHHH-HHhc-------CCCCCcchhhhhhcCChhhhhcchhhcCCCccccc-chhhhHHHHHHhcCC
Q psy6441 63 RKDKDVARLTMFQEIEL-VLSQ-------MPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRV-KYLEEQLREASCLGD 133 (464)
Q Consensus 63 ~~~~~~a~l~~~~ei~~-ll~~-------~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d-~~G~TpLh~Aa~~G~ 133 (464)
....+.+...+..++.. ++.. +..|.||||+|+..|+.+++++|++. |.+++..+ ..|+||||+|+..|+
T Consensus 10 ~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~t~L~~A~~~~~ 88 (240)
T 3eu9_A 10 TWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISK-GAIVDQLGGDLNSTPLHWATRQGH 88 (240)
T ss_dssp GCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBTTTTBCHHHHHHHHTC
T ss_pred chHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHc-CCcchhhcCCcCCChhHHHHHcCC
Confidence 34445555544444333 3332 36789999999999999999999999 88877655 559999999999999
Q ss_pred HHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhcc----HHHHHHH-hCCC
Q psy6441 134 FEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKEETPLALATK----PEVRILL-GGEP 208 (464)
Q Consensus 134 ~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~~----~~i~~LL-~~~~ 208 (464)
.+++++|++.|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+. .+++++| ..+.
T Consensus 89 ~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~ 167 (240)
T 3eu9_A 89 LSMVVQLMKYGADPSLIDG-EGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNV 167 (240)
T ss_dssp HHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCcccCC-CCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCC
Confidence 9999999999999999854 99999999999999999999999999999999999999999972 3566666 4444
Q ss_pred CCcccCCCCCCCcccccCCCCcHHHHHHHHhCCCCCCCCC
Q psy6441 209 GVTINTADLPIVPNYIKNEPLDPRVNDYQVSNQNRTHQTN 248 (464)
Q Consensus 209 ~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn~~~~~~~~ 248 (464)
.........+.||+++|...++..+.++|++.+.....+.
T Consensus 168 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 207 (240)
T 3eu9_A 168 SVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQN 207 (240)
T ss_dssp CTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBC
T ss_pred CcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 4444444478899999999999999999998766554443
No 82
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.87 E-value=1.2e-22 Score=203.44 Aligned_cols=182 Identities=11% Similarity=-0.001 Sum_probs=138.7
Q ss_pred hHHHHhhhHHHHHHHh---------cCCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCC---H
Q psy6441 67 DVARLTMFQEIELVLS---------QMPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGD---F 134 (464)
Q Consensus 67 ~~a~l~~~~ei~~ll~---------~~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~---~ 134 (464)
+.+......++..++. .+..|+||||+|+..|+.++|++|++. |++++.+|..|+||||+|+..|+ .
T Consensus 102 ~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~-Gad~n~~d~~g~TpLh~A~~~g~~~~~ 180 (327)
T 1sw6_A 102 HVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKH-GSNRLYGDNMGESCLVKAVKSVNNYDS 180 (327)
T ss_dssp --CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTBCCTTCCCHHHHHHHSSHHHHT
T ss_pred HHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHhcccccH
Confidence 3444445555554433 457899999999999999999999999 99999999999999999999998 7
Q ss_pred HHHHHHHHCC-CCcccccCCCCCcHHHHHHH----cCCHHHHHHHHHC--------------------CCCCCCCCCCCC
Q psy6441 135 EAVCELVSKG-IDINAQHDMNGWTALHWAAK----RGQKDIVSYLLKH--------------------GADKSLLTSKEE 189 (464)
Q Consensus 135 eiVk~LL~~G-advn~~dd~~G~TpLH~Aa~----~G~~eiv~lLL~~--------------------GAdin~~D~~G~ 189 (464)
++++.|++.+ ++++.++. .|+||||+|+. .|+.+++++|++. |++++.+|..|+
T Consensus 181 ~~~~~ll~~~~~~~~~~d~-~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~ 259 (327)
T 1sw6_A 181 GTFEALLDYLYPCLILEDS-MNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERK 259 (327)
T ss_dssp TCHHHHHHHHGGGGGEECT-TCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------
T ss_pred HHHHHHHHhhhccccCCCC-CCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCC
Confidence 8888898886 78999955 99999999999 9999999999987 899999999999
Q ss_pred chhHhhccHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhCCCCCCCCCCCCCCCCc
Q psy6441 190 TPLALATKPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSNQNRTHQTNPVTANQNV 256 (464)
Q Consensus 190 TPLh~A~~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn~~~~~~~~p~~~~~p~ 256 (464)
||||+|+. +..+|.. +. ...+..+.||+++|+..++..++++|++.+.....+. ..+.+|.
T Consensus 260 t~L~~a~~--~~~Ll~~--~~-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d-~~G~TpL 320 (327)
T 1sw6_A 260 DSILENLD--LKWIIAN--ML-NAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIAN-KSGLRPV 320 (327)
T ss_dssp CHHHHHCS--HHHHHHH--TT-TCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCC-TTSCCGG
T ss_pred ChhHHHHH--HHHHHHh--CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCCHH
Confidence 99999987 4444433 22 3456678899999999999999999999988776665 4444444
No 83
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=2e-22 Score=189.29 Aligned_cols=121 Identities=27% Similarity=0.227 Sum_probs=113.6
Q ss_pred hcCCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHC-CCCcccccCCCCCcHHH
Q psy6441 82 SQMPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSK-GIDINAQHDMNGWTALH 160 (464)
Q Consensus 82 ~~~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~-Gadvn~~dd~~G~TpLH 160 (464)
..+..|.||||+|+..|+.+++++|++. |++++.+|..|+||||+||..|+.+++++|++. |++++.++. .|+||||
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~-~g~tpL~ 145 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDN-RVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNK-LGDTALH 145 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCT-TSCCHHH
T ss_pred ccccccccccccccccCcHHHHHHHHhC-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCC-CCCCHHH
Confidence 3456899999999999999999999998 999999999999999999999999999999999 999999955 9999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhccHHHHHHH
Q psy6441 161 WAAKRGQKDIVSYLLKHGADKSLLTSKEETPLALATKPEVRILL 204 (464)
Q Consensus 161 ~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~~~~i~~LL 204 (464)
+|+..|+.+++++|+++|++++.+|..|+||||+|+.....++|
T Consensus 146 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l 189 (222)
T 3ehr_A 146 AAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLL 189 (222)
T ss_dssp HHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHH
Confidence 99999999999999999999999999999999999876655555
No 84
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.86 E-value=4.5e-22 Score=194.60 Aligned_cols=122 Identities=25% Similarity=0.302 Sum_probs=113.7
Q ss_pred CCCCCcchhhhh-----hcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcH
Q psy6441 84 MPDGHGSIVNGM-----ENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTA 158 (464)
Q Consensus 84 ~~~g~TpLh~Aa-----~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~Tp 158 (464)
+..|.||||+|+ ..++.++++.|++. |...+..+..|+||||+|+..|+.++|++|+++|+++|.+|. .|+||
T Consensus 142 ~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~-g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~-~G~Tp 219 (276)
T 4hbd_A 142 NRAGYSPIMLTALATLKTQDDIETVLQLFRL-GNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDD-DGSTA 219 (276)
T ss_dssp CTTSCCHHHHGGGCCCCSHHHHHHHHHHHHH-SCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCH
T ss_pred CCCCCCHHHHHHHHHhhhhhhHHHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCC-CCCCH
Confidence 468999999999 77999999999999 999999999999999999999999999999999999999965 99999
Q ss_pred HHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCchhHhhc---cHHHHHHHhCC
Q psy6441 159 LHWAAKRGQKDIVSYLLK-HGADKSLLTSKEETPLALAT---KPEVRILLGGE 207 (464)
Q Consensus 159 LH~Aa~~G~~eiv~lLL~-~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~ 207 (464)
||+|+..|+.+++++|++ .|++++.+|..|+||||+|+ +.+++++|...
T Consensus 220 Lh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 220 LMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSR 272 (276)
T ss_dssp HHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 999999999999999999 89999999999999999996 56888888543
No 85
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.86 E-value=2.5e-22 Score=191.77 Aligned_cols=151 Identities=19% Similarity=0.152 Sum_probs=109.7
Q ss_pred CCChHhHHHHHHHhcCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHHHHhcCCCCCcchhhhhhcCChhhhhcchh
Q psy6441 29 ELTYYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLSQMPDGHGSIVNGMENTHLNSARLPFS 108 (464)
Q Consensus 29 ~l~~~~lL~i~c~~~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~ll~~~~~g~TpLh~Aa~~G~~~iVk~LL~ 108 (464)
+.+++++|+.++.....+..+.+..... +. .....|.||||.|+..|+.+++++|++
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~----------~~-------------~~~~~~~t~L~~A~~~g~~~~v~~Ll~ 58 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGM----------RV-------------KFNPLPLALLLDSSLEGEFDLVQRIIY 58 (239)
T ss_dssp ----------------------------------------------------------CHHHHHHHHHHTCHHHHHHHTS
T ss_pred CccccccCchhhhhhhHHHHHHHhccCC----------Cc-------------ccCchhhHHHHHHHHcCCHHHHHHHHH
Confidence 4567788888877766653333322111 00 012468899999999999999999999
Q ss_pred hcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Q psy6441 109 VLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKE 188 (464)
Q Consensus 109 ~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G 188 (464)
. |++++.+|..|+||||+|+..|+.+++++|+++|++++.+|. .|+||||+|+..|+.+++++|+++|++++.++..|
T Consensus 59 ~-g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~ 136 (239)
T 1ycs_B 59 E-VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADS-DGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSD 136 (239)
T ss_dssp T-TSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSS
T ss_pred c-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCC
Confidence 9 999999999999999999999999999999999999999965 99999999999999999999999999999999888
Q ss_pred C-chhHhh--c---cHHHHHHH
Q psy6441 189 E-TPLALA--T---KPEVRILL 204 (464)
Q Consensus 189 ~-TPLh~A--~---~~~i~~LL 204 (464)
. ||||+| + +.+++++|
T Consensus 137 ~~t~l~~a~~~~~g~~~~~~~L 158 (239)
T 1ycs_B 137 MQTAADKCEEMEEGYTQCSQFL 158 (239)
T ss_dssp CCCHHHHCCSSSTTCCCHHHHH
T ss_pred CcchHHHHHHhhhccHHHHHHH
Confidence 7 999999 3 35677777
No 86
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.86 E-value=1.7e-22 Score=187.49 Aligned_cols=119 Identities=13% Similarity=0.015 Sum_probs=107.7
Q ss_pred CCCCcchhhhhhcCCh----hhhhcchhhcCCCcccccchhhhHHHHHHhcCC------HHHHHHHHHCCCCcccccCCC
Q psy6441 85 PDGHGSIVNGMENTHL----NSARLPFSVLGVSDMDRVKYLEEQLREASCLGD------FEAVCELVSKGIDINAQHDMN 154 (464)
Q Consensus 85 ~~g~TpLh~Aa~~G~~----~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~------~eiVk~LL~~Gadvn~~dd~~ 154 (464)
..|+||||+|+..|+. +++++|++. |++++.+|..|+||||+|+..|+ .+++++|+++|+++|.+|. .
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~-Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~-~ 113 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINK-GADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYK-P 113 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHT-TCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBG-G
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCC-C
Confidence 3599999999999975 589999999 99999999999999999999987 6789999999999999965 8
Q ss_pred CC-cHHHHHHHcC-----CHHHHHHHHH-CCCCCCCCCCCCCchhHhhc---cHHHHHHHh
Q psy6441 155 GW-TALHWAAKRG-----QKDIVSYLLK-HGADKSLLTSKEETPLALAT---KPEVRILLG 205 (464)
Q Consensus 155 G~-TpLH~Aa~~G-----~~eiv~lLL~-~GAdin~~D~~G~TPLh~A~---~~~i~~LL~ 205 (464)
|+ ||||+|+..+ +.+++++|++ +|+|++.+|..|+||||+|+ +.+++++|.
T Consensus 114 g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~ 174 (186)
T 3t8k_A 114 YKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMME 174 (186)
T ss_dssp GTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHH
T ss_pred cCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99 9999999954 4579999999 99999999999999999996 567888773
No 87
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.86 E-value=2.3e-22 Score=192.57 Aligned_cols=161 Identities=20% Similarity=0.155 Sum_probs=129.9
Q ss_pred CChHhHHHHHH---HhcCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHH--HHhcCCCCCcchhhhhhcCChhhhh
Q psy6441 30 LTYYSLLNICC---KELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIEL--VLSQMPDGHGSIVNGMENTHLNSAR 104 (464)
Q Consensus 30 l~~~~lL~i~c---~~~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~--ll~~~~~g~TpLh~Aa~~G~~~iVk 104 (464)
..+.++|++|+ +....+.++.+......+.. ...+.. +...+..|+||||+|+..|+.++|+
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~-------------~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~ 110 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGN-------------MREFINSPFRDVYYRGQTALHIAIERRCKHYVE 110 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTC-------------HHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHH
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccc-------------hHhhhcccccccccCCCCHHHHHHHcCCHHHHH
Confidence 34778999888 56777656555543211100 000000 0111238999999999999999999
Q ss_pred cchhhcCCCccccc--------------chhhhHHHHHHhcCCHHHHHHHHH---CCCCcccccCCCCCcHHHHHHHcCC
Q psy6441 105 LPFSVLGVSDMDRV--------------KYLEEQLREASCLGDFEAVCELVS---KGIDINAQHDMNGWTALHWAAKRGQ 167 (464)
Q Consensus 105 ~LL~~~ga~~~~~d--------------~~G~TpLh~Aa~~G~~eiVk~LL~---~Gadvn~~dd~~G~TpLH~Aa~~G~ 167 (464)
+|++. |++++..+ ..|+||||+|+..|+.+++++|++ +|++++.+|. .|+||||+|+..|+
T Consensus 111 ~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~-~g~TpLh~A~~~~~ 188 (260)
T 3jxi_A 111 LLVEK-GADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDS-RGNTVLHALVAIAD 188 (260)
T ss_dssp HHHHT-TCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCT-TSCCHHHHHHHHCC
T ss_pred HHHhC-CCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCC-CCCcHHHHHHHhcc
Confidence 99999 99999998 589999999999999999999999 9999999965 99999999999888
Q ss_pred ---------HHHHHHHHHCCCCC-------CCCCCCCCchhHhhc---cHHHHHHHh
Q psy6441 168 ---------KDIVSYLLKHGADK-------SLLTSKEETPLALAT---KPEVRILLG 205 (464)
Q Consensus 168 ---------~eiv~lLL~~GAdi-------n~~D~~G~TPLh~A~---~~~i~~LL~ 205 (464)
.+++++|+++|+++ +.+|..|+||||+|+ +.+++++|.
T Consensus 189 ~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll 245 (260)
T 3jxi_A 189 NTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHII 245 (260)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHH
Confidence 79999999999999 679999999999996 568888874
No 88
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.86 E-value=5e-22 Score=192.13 Aligned_cols=161 Identities=20% Similarity=0.202 Sum_probs=131.5
Q ss_pred CCChHhHHHHHHHh---cCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHHHHh-----cCCCCCcchhhhhhcCCh
Q psy6441 29 ELTYYSLLNICCKE---LNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLS-----QMPDGHGSIVNGMENTHL 100 (464)
Q Consensus 29 ~l~~~~lL~i~c~~---~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~ll~-----~~~~g~TpLh~Aa~~G~~ 100 (464)
+..+.++|++||.. ...+.++.+........ .+..++. .+..|.||||+|+..|+.
T Consensus 51 ~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~----------------~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~ 114 (273)
T 2pnn_A 51 PETGKTCLLKAMLNLHNGQNDTIALLLDVARKTD----------------SLKQFVNASYTDSYYKGQTALHIAIERRNM 114 (273)
T ss_dssp TTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTT----------------CHHHHHTCCCCSTTTTTCCHHHHHHHTTCH
T ss_pred CcCCCCHHHHHHHHHhcCChHHHHHHHHhhcccc----------------chhHHhhcccccccCCCCCHHHHHHHcCCH
Confidence 45678899999875 66655555444321000 0001111 245899999999999999
Q ss_pred hhhhcchhhcCCCcccccc--------------hhhhHHHHHHhcCCHHHHHHHHH---CCCCcccccCCCCCcHHHHHH
Q psy6441 101 NSARLPFSVLGVSDMDRVK--------------YLEEQLREASCLGDFEAVCELVS---KGIDINAQHDMNGWTALHWAA 163 (464)
Q Consensus 101 ~iVk~LL~~~ga~~~~~d~--------------~G~TpLh~Aa~~G~~eiVk~LL~---~Gadvn~~dd~~G~TpLH~Aa 163 (464)
++|++|++. |++++..+. .|+||||+|+..|+.+++++|++ +|++++.+|. .|+||||+|+
T Consensus 115 ~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~-~g~tpLh~A~ 192 (273)
T 2pnn_A 115 TLVTLLVEN-GADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDS-VGNTVLHALV 192 (273)
T ss_dssp HHHHHHHHT-TCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCT-TSCCHHHHHH
T ss_pred HHHHHHHHC-CCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCC-CCCcHHHHHH
Confidence 999999999 999999997 79999999999999999999999 9999999965 9999999999
Q ss_pred HcCC---------HHHHHHHHHCCCCCC-------CCCCCCCchhHhhc---cHHHHHHHhCC
Q psy6441 164 KRGQ---------KDIVSYLLKHGADKS-------LLTSKEETPLALAT---KPEVRILLGGE 207 (464)
Q Consensus 164 ~~G~---------~eiv~lLL~~GAdin-------~~D~~G~TPLh~A~---~~~i~~LL~~~ 207 (464)
..|+ .+++++|+++|++++ .+|..|+||||+|+ +.+++++|...
T Consensus 193 ~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 255 (273)
T 2pnn_A 193 EVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQR 255 (273)
T ss_dssp HHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHC
Confidence 9998 899999999999997 48999999999996 66888888443
No 89
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.84 E-value=1.7e-21 Score=173.51 Aligned_cols=142 Identities=13% Similarity=0.068 Sum_probs=107.3
Q ss_pred CCChHhHHHHHHHhcCCCCHHHHHHhcCCchhhhccchhHHHHhhhHHHHHHHhcCCCCCcchhhhhhcCChhhhhcchh
Q psy6441 29 ELTYYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLSQMPDGHGSIVNGMENTHLNSARLPFS 108 (464)
Q Consensus 29 ~l~~~~lL~i~c~~~~i~~~~~l~~~~~l~~~~~~~~~~~a~l~~~~ei~~ll~~~~~g~TpLh~Aa~~G~~~iVk~LL~ 108 (464)
.-.+.++++.|+....++.++.+.....- +...+..|.||||+|+ .|+.+++++|++
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~----------------------~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~ 65 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGAN----------------------PNAPNSYGRRPIQVMM-MGSARVAELLLL 65 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCC----------------------TTCCCSSSCCTTTSSC-TTCHHHHHHHHT
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCC----------------------CCCCCCCCCCHHHHHH-cCCHHHHHHHHH
Confidence 34467889999888887755555442211 1123568999999996 899999999999
Q ss_pred hcCCCcccccchhhh-HHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Q psy6441 109 VLGVSDMDRVKYLEE-QLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSK 187 (464)
Q Consensus 109 ~~ga~~~~~d~~G~T-pLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~ 187 (464)
. |++++.+|..|+| |||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..
T Consensus 66 ~-g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~-~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 143 (156)
T 1bi7_B 66 H-GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDA-WGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHA 143 (156)
T ss_dssp T-TCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCT-TCCCHHHHHHHHTCHHHHHHHSSCC---------
T ss_pred c-CCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcC
Confidence 9 9999999999999 99999999999999999999999999955 9999999999999999999999999999999999
Q ss_pred CCchhHhh
Q psy6441 188 EETPLALA 195 (464)
Q Consensus 188 G~TPLh~A 195 (464)
|.||.+-+
T Consensus 144 g~t~~~~~ 151 (156)
T 1bi7_B 144 RIDAAEGP 151 (156)
T ss_dssp --------
T ss_pred cCcccccC
Confidence 99998743
No 90
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.84 E-value=4.7e-21 Score=156.14 Aligned_cols=93 Identities=32% Similarity=0.438 Sum_probs=85.9
Q ss_pred CCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHc
Q psy6441 86 DGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKR 165 (464)
Q Consensus 86 ~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~ 165 (464)
+|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++|++++.+|. .|+||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~-~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHc
Confidence 488999999999999999999998 999999999999999999999999999999999999999954 999999999999
Q ss_pred CCHHHHHHHHHCCCC
Q psy6441 166 GQKDIVSYLLKHGAD 180 (464)
Q Consensus 166 G~~eiv~lLL~~GAd 180 (464)
|+.+++++|+++||+
T Consensus 79 ~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 79 GHLEVVKLLLEAGAY 93 (93)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 999999999999985
No 91
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.83 E-value=3.8e-21 Score=192.51 Aligned_cols=113 Identities=19% Similarity=0.144 Sum_probs=69.6
Q ss_pred CCCCCcchhhhhhcCC---hhhhhcchhhcCCCcccccchhhhHHHHHHh----cCCHHHHHHHHHC-------------
Q psy6441 84 MPDGHGSIVNGMENTH---LNSARLPFSVLGVSDMDRVKYLEEQLREASC----LGDFEAVCELVSK------------- 143 (464)
Q Consensus 84 ~~~g~TpLh~Aa~~G~---~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~----~G~~eiVk~LL~~------------- 143 (464)
+..|+||||+|+..|+ .++++.|++...++++.+|..|+||||+|+. .|+.+++++|++.
T Consensus 161 d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i 240 (327)
T 1sw6_A 161 DNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPI 240 (327)
T ss_dssp CTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCE
T ss_pred CCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHH
Confidence 4567788888888777 6777777777446777777778888888877 7777888777766
Q ss_pred -------CCCcccccC------------------------CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchh
Q psy6441 144 -------GIDINAQHD------------------------MNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKEETPL 192 (464)
Q Consensus 144 -------Gadvn~~dd------------------------~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPL 192 (464)
|++++.++. ..|+||||+|+..|+.++|++|+++|||++.+|..|+|||
T Consensus 241 ~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL 320 (327)
T 1sw6_A 241 QSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPV 320 (327)
T ss_dssp EEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGG
T ss_pred HhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHH
Confidence 444444422 2555555555555555555555555555555555555555
Q ss_pred Hhhc
Q psy6441 193 ALAT 196 (464)
Q Consensus 193 h~A~ 196 (464)
|+|+
T Consensus 321 ~~A~ 324 (327)
T 1sw6_A 321 DFGA 324 (327)
T ss_dssp GGTC
T ss_pred HHHH
Confidence 5554
No 92
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=2.2e-21 Score=163.60 Aligned_cols=109 Identities=29% Similarity=0.300 Sum_probs=102.0
Q ss_pred hcCCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHH
Q psy6441 82 SQMPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHW 161 (464)
Q Consensus 82 ~~~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~ 161 (464)
..+.+|.||||+|+..|+.+++++|++. |++++..|..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~-~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSK-GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSK-DGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTT-TCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCT-TCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCC-CCCCHHHH
Confidence 4567999999999999999999999999 999999999999999999999999999999999999999965 99999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCchh
Q psy6441 162 AAKRGQKDIVSYLLKHGADKSLLTSKEETPL 192 (464)
Q Consensus 162 Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPL 192 (464)
|+..|+.+++++|+++||+++.++..|.||-
T Consensus 82 A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 9999999999999999999999999999884
No 93
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.82 E-value=4.4e-21 Score=166.97 Aligned_cols=130 Identities=18% Similarity=0.148 Sum_probs=115.5
Q ss_pred CCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CC
Q psy6441 111 GVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSK-EE 189 (464)
Q Consensus 111 ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~-G~ 189 (464)
+++++..+..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+. |+.+++++|+++|++++.+|.. |+
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~ 79 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNR-FGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLT 79 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTB
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCC-CCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 578899999999999999999999999999999999999954 99999999999 9999999999999999999999 99
Q ss_pred chhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhCCC
Q psy6441 190 TPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSNQN 242 (464)
Q Consensus 190 TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn~~ 242 (464)
||||+|+ +.+++++|...+......+..+.||+++|....+..+.++|+++++
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 9999997 5678888754443335556788999999999999999999886643
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.82 E-value=1.5e-20 Score=163.32 Aligned_cols=125 Identities=24% Similarity=0.243 Sum_probs=106.2
Q ss_pred CCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc
Q psy6441 111 GVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKEET 190 (464)
Q Consensus 111 ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~T 190 (464)
|+++ .+|..|+||||+|+..|+.+++++|++.|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 78 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDH-AGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDS 78 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCC
Confidence 5666 7889999999999999999999999999999999954 9999999999999999999999999999999999999
Q ss_pred hhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHH
Q psy6441 191 PLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQ 237 (464)
Q Consensus 191 PLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l 237 (464)
|||+|+ +.+++++|...+......+..+.||+++|.......+...+
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l 128 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLP 128 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhc
Confidence 999996 56788887544333355677889999999887666655543
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.82 E-value=8.8e-21 Score=188.81 Aligned_cols=135 Identities=24% Similarity=0.168 Sum_probs=114.2
Q ss_pred CcchhhhhhcCChhhhhcchhhcCCCccc------ccchhhhHHHHHHhc---CCHHHHHHHHHCCCCcccccCCCCCcH
Q psy6441 88 HGSIVNGMENTHLNSARLPFSVLGVSDMD------RVKYLEEQLREASCL---GDFEAVCELVSKGIDINAQHDMNGWTA 158 (464)
Q Consensus 88 ~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~------~d~~G~TpLh~Aa~~---G~~eiVk~LL~~Gadvn~~dd~~G~Tp 158 (464)
.++|+.|+..|+.+.++.|+.. |++++. .+..|+||||+|+.. |+.+++++|+++|+++|.+|. .|+||
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~-g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~-~G~Tp 229 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA-DGNTA 229 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT-TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCT-TCCCH
T ss_pred HHHHhhhhhccCHHHHHHHHhc-CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCC-CCCCH
Confidence 3569999999999999999988 999988 689999999999997 899999999999999999964 99999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCc
Q psy6441 159 LHWAAKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLD 230 (464)
Q Consensus 159 LH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h 230 (464)
||+|+..|+.+++++|+++||+++.+|..|+||||+|+ +.+++++|..... ..+.||+++|+..++
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga------~~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQA------GTFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH------HTTSSCCC-------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC------CCCCChhHHHHhcCC
Confidence 99999999999999999999999999999999999996 5688888843221 135588888776554
No 96
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.80 E-value=1.9e-19 Score=156.48 Aligned_cols=123 Identities=26% Similarity=0.249 Sum_probs=107.7
Q ss_pred ccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc
Q psy6441 117 RVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT 196 (464)
Q Consensus 117 ~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~ 196 (464)
....+.||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDE-YGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 346789999999999999999999999999999954 9999999999999999999999999999999999999999997
Q ss_pred ---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhC
Q psy6441 197 ---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSN 240 (464)
Q Consensus 197 ---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn 240 (464)
+.+++++|...+......+..+.||+++|....+..+.++|++.
T Consensus 89 ~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred HcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 56788877544333345567789999999999999999988754
No 97
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.80 E-value=1.1e-19 Score=186.54 Aligned_cols=118 Identities=20% Similarity=0.239 Sum_probs=111.1
Q ss_pred CCCcchhhhhhc-CChhhhhcchhhcCCCccccc--chhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHH
Q psy6441 86 DGHGSIVNGMEN-THLNSARLPFSVLGVSDMDRV--KYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWA 162 (464)
Q Consensus 86 ~g~TpLh~Aa~~-G~~~iVk~LL~~~ga~~~~~d--~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~A 162 (464)
.+.|+||.|+.. |+.++++.|++. |++++..+ ..|+||||+|+..|+.+++++|+++|+++|.+|. .|+||||+|
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~-Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~-~G~TpLh~A 275 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAH-GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADS-AGRGPLHHA 275 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHT-TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHc-CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHH
Confidence 456799999999 999999999998 99999998 8999999999999999999999999999999955 999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHh
Q psy6441 163 AKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLG 205 (464)
Q Consensus 163 a~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~ 205 (464)
+..|+.+++++||++||+++.+|..|+||||+|+ +.+++++|.
T Consensus 276 ~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl 321 (368)
T 3jue_A 276 TILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLR 321 (368)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 9999999999999999999999999999999996 668888883
No 98
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.80 E-value=5.7e-20 Score=194.72 Aligned_cols=117 Identities=26% Similarity=0.205 Sum_probs=109.1
Q ss_pred CcchhhhhhcCChhhhhcchhhcCCCcccc------cchhhhHHHHHHh---cCCHHHHHHHHHCCCCcccccCCCCCcH
Q psy6441 88 HGSIVNGMENTHLNSARLPFSVLGVSDMDR------VKYLEEQLREASC---LGDFEAVCELVSKGIDINAQHDMNGWTA 158 (464)
Q Consensus 88 ~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~------d~~G~TpLh~Aa~---~G~~eiVk~LL~~Gadvn~~dd~~G~Tp 158 (464)
.+.||.|+..|+.++|+.|++. |++++.. +..|+||||+||. .|+.+++++|+++|+++|.+|. .|+||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~-g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~-~g~Tp 210 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA-DGNTA 210 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT-TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCS-SSCCH
T ss_pred HHHHHHHHhccCHHHHHHHHhh-cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCC-CCCcH
Confidence 3679999999999999999999 9999887 8899999999966 9999999999999999999965 99999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHhC
Q psy6441 159 LHWAAKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLGG 206 (464)
Q Consensus 159 LH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~~ 206 (464)
||+||..|+.+++++||++|||++.+|..|+||||+|+ +.+++++|..
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~ 261 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQ 261 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999999999999999999999999996 5788888843
No 99
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.78 E-value=2.5e-19 Score=176.14 Aligned_cols=115 Identities=22% Similarity=0.245 Sum_probs=106.5
Q ss_pred cchhhhhhcCChhhhhcchhhcCCCcc------cccchhhhHHHHHHhc---CCHHHHHHHHHCCCCcccccCCCCCcHH
Q psy6441 89 GSIVNGMENTHLNSARLPFSVLGVSDM------DRVKYLEEQLREASCL---GDFEAVCELVSKGIDINAQHDMNGWTAL 159 (464)
Q Consensus 89 TpLh~Aa~~G~~~iVk~LL~~~ga~~~------~~d~~G~TpLh~Aa~~---G~~eiVk~LL~~Gadvn~~dd~~G~TpL 159 (464)
++|+.|+..|+.+.++.++.. |++++ ..+..|+||||+|+.. |+.+++++|+++|+++|.+|. .|+|||
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~-g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~-~g~TpL 209 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYAD-GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTG-KGSTAL 209 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT-TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCT-TCCCHH
T ss_pred hhhhhHhhhcccHHHHHHHHh-hcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCC-CCCCHH
Confidence 579999999999999999998 88844 4578999999999999 899999999999999999965 999999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---cHHHHHHHh
Q psy6441 160 HWAAKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT---KPEVRILLG 205 (464)
Q Consensus 160 H~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~---~~~i~~LL~ 205 (464)
|+|+..|+.+++++|+++|||++.+|..|+||||+|+ +.+++++|.
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll 258 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLT 258 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999999999999999999999996 678888884
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.78 E-value=4.5e-19 Score=151.31 Aligned_cols=110 Identities=25% Similarity=0.281 Sum_probs=94.7
Q ss_pred cchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc-
Q psy6441 118 VKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT- 196 (464)
Q Consensus 118 d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~- 196 (464)
+..|.||||+|+..|+.+++++|++.|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLE-GGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCT-TSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 45789999999999999999999999999999955 9999999999999999999999999999999999999999996
Q ss_pred --cHHHHHHHhCCCCCcccCCCCCCCcccccCCC
Q psy6441 197 --KPEVRILLGGEPGVTINTADLPIVPNYIKNEP 228 (464)
Q Consensus 197 --~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~ 228 (464)
+.+++++|...+......+..+.||+++|...
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCH
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCH
Confidence 56788887544333355677888999998553
No 101
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.78 E-value=2.7e-19 Score=163.56 Aligned_cols=132 Identities=22% Similarity=0.179 Sum_probs=107.9
Q ss_pred hhhhhcCChhhhhcchhhcCCCcc-----------cccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHH
Q psy6441 92 VNGMENTHLNSARLPFSVLGVSDM-----------DRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALH 160 (464)
Q Consensus 92 h~Aa~~G~~~iVk~LL~~~ga~~~-----------~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH 160 (464)
..|++.|..+++++|+.. +.... ..+..|+||||+|+..|+.+++++|++ |++++.++. .|+||||
T Consensus 5 ~~aa~~~~~~~~~~li~~-~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~-~g~t~L~ 81 (183)
T 3deo_A 5 IIGSRTAGEGAMEYLIEW-KDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDE-NGRTALL 81 (183)
T ss_dssp EEEEEEETTTEEEEEEEE-TTCCCCEEEEGGGSCHHHHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCT-TSCCHHH
T ss_pred HHHHHhcCCchhHHHHHH-hCCCCccccchhcccccCCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCC-CCCCHHH
Confidence 467788888888888865 22221 235789999999999999999999999 999999965 9999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCC-CCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccC
Q psy6441 161 WAAKRGQKDIVSYLLKHGADKSLLT-SKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKN 226 (464)
Q Consensus 161 ~Aa~~G~~eiv~lLL~~GAdin~~D-~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa 226 (464)
+|+..|+.+++++|+++|++++.+| ..|+||||+|+ +.+++++|...+......+..+.||+++|.
T Consensus 82 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 151 (183)
T 3deo_A 82 FVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAR 151 (183)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHH
Confidence 9999999999999999999999998 89999999996 567888774433333445666778777664
No 102
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.78 E-value=1.1e-20 Score=194.32 Aligned_cols=155 Identities=14% Similarity=0.027 Sum_probs=128.1
Q ss_pred HHHHhcCCCCCcchhhhhhcCChhhhhcchhhcCCC---cccccchhhhHHHHHHhcCCHHHHHHHHHCCCCc---cccc
Q psy6441 78 ELVLSQMPDGHGSIVNGMENTHLNSARLPFSVLGVS---DMDRVKYLEEQLREASCLGDFEAVCELVSKGIDI---NAQH 151 (464)
Q Consensus 78 ~~ll~~~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~---~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadv---n~~d 151 (464)
..++..+.++.||||+|+..|+.++|++|++. |+. .+..+..|.||||+||..|+.++|++|+++|+++ +..+
T Consensus 83 ~~l~~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~-ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~ 161 (376)
T 2aja_A 83 SDAHKKGIKSEVICFVAAITGCSSALDTLCLL-LTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQA 161 (376)
T ss_dssp HHHHHHTCCHHHHHHHHHHHCCHHHHHHHTTC---CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSH
T ss_pred HHHHHcCCCcCCHHHHHHHcCCHHHHHHHHHc-CCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCC
Confidence 34556677888999999999999999999998 762 2345568899999999999999999999999862 3332
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCchhHhhc----cHHHHHHHhCCCCCcccCCCCCCCccccc
Q psy6441 152 DMNGWTALHWAAKRGQKDIVSYLLKHGADKSL--LTSKEETPLALAT----KPEVRILLGGEPGVTINTADLPIVPNYIK 225 (464)
Q Consensus 152 d~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~--~D~~G~TPLh~A~----~~~i~~LL~~~~~~~~~~~~~~~tpl~la 225 (464)
. + +||||+||..|+.++|++|+++|++++. .|..|+||||+|+ +.+++++|...+ . .+.||++.|
T Consensus 162 ~-~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g-a------~~~taL~~A 232 (376)
T 2aja_A 162 E-N-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP-V------MLAYAEIHE 232 (376)
T ss_dssp H-H-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH-H------HHHHHHHCT
T ss_pred C-C-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCC-C------ccchHHHHH
Confidence 2 3 8999999999999999999999999987 8999999999998 468999995532 2 256999999
Q ss_pred CCCCcHHHHHHHHhCCC
Q psy6441 226 NEPLDPRVNDYQVSNQN 242 (464)
Q Consensus 226 a~~~h~a~~~~l~sn~~ 242 (464)
+..++.++.++|.+++.
T Consensus 233 a~~g~~evv~lL~~~ga 249 (376)
T 2aja_A 233 FEYGEKYVNPFIARHVN 249 (376)
T ss_dssp TTTTTTTHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHhcCc
Confidence 99999999999886643
No 103
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.78 E-value=7.5e-19 Score=148.31 Aligned_cols=122 Identities=29% Similarity=0.286 Sum_probs=108.2
Q ss_pred hhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---
Q psy6441 120 YLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT--- 196 (464)
Q Consensus 120 ~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~--- 196 (464)
+|+||||+|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Confidence 488999999999999999999999999999855 9999999999999999999999999999999999999999996
Q ss_pred cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhCCC
Q psy6441 197 KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSNQN 242 (464)
Q Consensus 197 ~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn~~ 242 (464)
+.+++++|...+......+..+.||+++|....+..+.++|.++++
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 5678888754433334556778899999999999999999987654
No 104
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.77 E-value=8e-19 Score=142.81 Aligned_cols=85 Identities=39% Similarity=0.472 Sum_probs=78.6
Q ss_pred hhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc---
Q psy6441 120 YLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT--- 196 (464)
Q Consensus 120 ~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~--- 196 (464)
+|+||||+|+..|+.+++++|++.|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 489999999999999999999999999999965 9999999999999999999999999999999999999999996
Q ss_pred cHHHHHHHh
Q psy6441 197 KPEVRILLG 205 (464)
Q Consensus 197 ~~~i~~LL~ 205 (464)
+.+++++|.
T Consensus 80 ~~~~~~~Ll 88 (93)
T 1n0q_A 80 HLEVVKLLL 88 (93)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 567888774
No 105
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.77 E-value=2.2e-19 Score=168.52 Aligned_cols=161 Identities=16% Similarity=0.111 Sum_probs=122.7
Q ss_pred CCCCcchhhhhhcCChhhhhcchhhcC---------------CCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCccc
Q psy6441 85 PDGHGSIVNGMENTHLNSARLPFSVLG---------------VSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINA 149 (464)
Q Consensus 85 ~~g~TpLh~Aa~~G~~~iVk~LL~~~g---------------a~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~ 149 (464)
.++.++.+++.+.|....+..+.+. + .-++..+..|.||||+||..|+.+++++|++.|++++.
T Consensus 23 ~~~~~~~el~~~~Gd~~~v~~~~~~-~w~~~~~~g~~gl~p~~~v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 101 (222)
T 3ehr_A 23 FEPRTPDELYIEEGDIIYITDMSDT-NWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNG 101 (222)
T ss_dssp CCCSSTTBCCCCTTCEEEEEECCSS-SEEEEEETTEEEEEEHHHHHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred cCCCCCCcccccCCCEEEEeccccc-hhHhcccCCcceeechhhccccccccccccccccccCcHHHHHHHHhCCCCccc
Confidence 4677788888888887666544332 1 01233556789999999999999999999999999999
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCccccc
Q psy6441 150 QHDMNGWTALHWAAKRGQKDIVSYLLKH-GADKSLLTSKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIK 225 (464)
Q Consensus 150 ~dd~~G~TpLH~Aa~~G~~eiv~lLL~~-GAdin~~D~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~la 225 (464)
++. .|+||||+||..|+.+++++|+++ |++++.+|..|+||||+|+ +.+++++|...+......+..+.||+++|
T Consensus 102 ~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 180 (222)
T 3ehr_A 102 LDK-AGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMA 180 (222)
T ss_dssp CCT-TSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHC
T ss_pred cCC-CCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHh
Confidence 955 999999999999999999999998 9999999999999999996 56788877544333345667789999999
Q ss_pred CCCCcHHHHHHHHhCCCCCCCC
Q psy6441 226 NEPLDPRVNDYQVSNQNRTHQT 247 (464)
Q Consensus 226 a~~~h~a~~~~l~sn~~~~~~~ 247 (464)
....+..+.+.+...+.....+
T Consensus 181 ~~~~~~~~l~~l~~~~~~~~~~ 202 (222)
T 3ehr_A 181 TNAACASLLKKKQGTDAVRTLS 202 (222)
T ss_dssp CSHHHHHHHC------------
T ss_pred cchhHHHHHHHHhccchhhhcc
Confidence 9988888888877665554443
No 106
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.76 E-value=4.1e-19 Score=176.74 Aligned_cols=106 Identities=15% Similarity=0.056 Sum_probs=97.0
Q ss_pred CCCCCcchhhhhhc---CChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHH
Q psy6441 84 MPDGHGSIVNGMEN---THLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALH 160 (464)
Q Consensus 84 ~~~g~TpLh~Aa~~---G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH 160 (464)
+..|.||||+|+.. |+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++|++++.+|. .|+||||
T Consensus 187 ~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~-gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~-~G~TpL~ 264 (301)
T 2b0o_E 187 QAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNE-AGETALD 264 (301)
T ss_dssp CSCEECHHHHHHHTCCTTTHHHHHHHHHH-SSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCT-TSCCHHH
T ss_pred CCCCccHHHHHHHhcccCcHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHH
Confidence 45789999999997 899999999999 999999999999999999999999999999999999999955 9999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhcc
Q psy6441 161 WAAKRGQKDIVSYLLKHGADKSLLTSKEETPLALATK 197 (464)
Q Consensus 161 ~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~~ 197 (464)
+|+..|+.+++++|+++|++ .|.||||+|+.
T Consensus 265 ~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~ 295 (301)
T 2b0o_E 265 IARKKHHKECEELLEQAQAG------TFAFPLHVDYS 295 (301)
T ss_dssp HHHHHTCHHHHHHHHHHHHH------TTSSCCC----
T ss_pred HHHHcCCHHHHHHHHHhcCC------CCCChhHHHHh
Confidence 99999999999999999987 58999999974
No 107
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.75 E-value=8e-19 Score=168.45 Aligned_cols=136 Identities=23% Similarity=0.182 Sum_probs=113.2
Q ss_pred CCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHH
Q psy6441 85 PDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAK 164 (464)
Q Consensus 85 ~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~ 164 (464)
..+.+++.+++..|+.+.+..+... +. ..+..|.||||+|+..|+.+++++|++ |+++|.++. .|+||||+||.
T Consensus 13 ~~~~~~~l~~~~~g~~~~~~~~~~~-~~---~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~-~g~t~L~~A~~ 86 (244)
T 3ui2_A 13 GEGAMEYLIEWKDGHSPSWVPSSYI-AA---DVVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDE-NGRTALLFVAG 86 (244)
T ss_dssp TTTEEEEEEEESSCCCCEEEEGGGS-CH---HHHHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCT-TSCBHHHHHHH
T ss_pred CCCccHHHHHHHcCCCccccccccc-cc---ccccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCC-CCCCHHHHHHH
Confidence 3577888889999998888776554 32 344689999999999999999999999 999999965 99999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCC-CCCCchhHhhc---cHHHHHHHhCCCCCcccCCCCCCCcccccC
Q psy6441 165 RGQKDIVSYLLKHGADKSLLT-SKEETPLALAT---KPEVRILLGGEPGVTINTADLPIVPNYIKN 226 (464)
Q Consensus 165 ~G~~eiv~lLL~~GAdin~~D-~~G~TPLh~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa 226 (464)
.|+.+++++|+++|++++.+| ..|+||||+|+ +.+++++|...+......+..+.||+++|+
T Consensus 87 ~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~ 152 (244)
T 3ui2_A 87 LGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAR 152 (244)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 999999999999999999998 88999999996 568888875443333445667778877664
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.72 E-value=1.2e-17 Score=176.81 Aligned_cols=105 Identities=15% Similarity=0.066 Sum_probs=89.9
Q ss_pred CCCCCcchhhhhh---cCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHH
Q psy6441 84 MPDGHGSIVNGME---NTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALH 160 (464)
Q Consensus 84 ~~~g~TpLh~Aa~---~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH 160 (464)
+..|.||||+||. .|+.++|++|++. |++++.+|..|+||||+|+..|+.++|++|+++|++++.+|. .|+||||
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~-ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~tpl~ 245 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNE-AGETALD 245 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHH-SCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCT-TCCCHHH
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHc-CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHH
Confidence 3479999999955 9999999999999 999999999999999999999999999999999999999965 9999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc
Q psy6441 161 WAAKRGQKDIVSYLLKHGADKSLLTSKEETPLALAT 196 (464)
Q Consensus 161 ~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~ 196 (464)
+|+..|+.+++++|+++||+++. +|+|.+.
T Consensus 246 ~A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~ 275 (497)
T 3lvq_E 246 IARKKHHKECEELLEQAQAGTFA------FPLHVDY 275 (497)
T ss_dssp HHHHTTCHHHHHHHHHTCC-----------------
T ss_pred HHHHcCCHHHHHHHHHhCCCCCC------Ccceeec
Confidence 99999999999999999999987 5777654
No 109
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.71 E-value=7e-18 Score=141.95 Aligned_cols=91 Identities=38% Similarity=0.453 Sum_probs=84.2
Q ss_pred cccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchhHhh
Q psy6441 116 DRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKEETPLALA 195 (464)
Q Consensus 116 ~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A 195 (464)
.+|..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSK-DGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCS-SSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 5678999999999999999999999999999999954 999999999999999999999999999999999999999999
Q ss_pred c---cHHHHHHHhCC
Q psy6441 196 T---KPEVRILLGGE 207 (464)
Q Consensus 196 ~---~~~i~~LL~~~ 207 (464)
+ +.+++++|...
T Consensus 83 ~~~~~~~~~~~Ll~~ 97 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAK 97 (115)
T ss_dssp HTTTCHHHHHHHHTT
T ss_pred HHCCCHHHHHHHHHc
Confidence 6 56788888543
No 110
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.71 E-value=7.4e-18 Score=165.67 Aligned_cols=95 Identities=12% Similarity=0.034 Sum_probs=90.9
Q ss_pred CCCCCcchhhhhhc---CChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHH
Q psy6441 84 MPDGHGSIVNGMEN---THLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALH 160 (464)
Q Consensus 84 ~~~g~TpLh~Aa~~---G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH 160 (464)
+..|.||||+|+.. |+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++|++++.+|. .|+||||
T Consensus 166 ~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~-ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~-~g~tpL~ 243 (278)
T 1dcq_A 166 HEPDETALHLAVRSVDRTSLHIVDFLVQN-SGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANE-SGETPLD 243 (278)
T ss_dssp SSTTCBHHHHHHHHCCTTTHHHHHHHHHH-CSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHH
T ss_pred ccCCCCcchHHHHhcccchHHHHHHHHHC-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccC-CCCCHHH
Confidence 35699999999999 899999999999 999999999999999999999999999999999999999965 9999999
Q ss_pred HHHHcCCHHHHHHHHHCCCC
Q psy6441 161 WAAKRGQKDIVSYLLKHGAD 180 (464)
Q Consensus 161 ~Aa~~G~~eiv~lLL~~GAd 180 (464)
+|+..|+.+++++|+++|++
T Consensus 244 ~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 244 IAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999985
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.71 E-value=3.6e-17 Score=137.60 Aligned_cols=91 Identities=29% Similarity=0.389 Sum_probs=74.7
Q ss_pred CcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchh
Q psy6441 113 SDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKEETPL 192 (464)
Q Consensus 113 ~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPL 192 (464)
.....+..|+||||+|+..|+.+++++|++.|++++.+|. .|+||||+|+..|+.+++++|+++|++++.+|..|+|||
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~-~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl 94 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDK-NGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAF 94 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHH
Confidence 3455677889999999999999999999999999998854 899999999999999999999999999999999999999
Q ss_pred Hhhc---cHHHHHHH
Q psy6441 193 ALAT---KPEVRILL 204 (464)
Q Consensus 193 h~A~---~~~i~~LL 204 (464)
|+|+ +.+++++|
T Consensus 95 ~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 95 DISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHh
Confidence 9986 45777776
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.69 E-value=2e-17 Score=139.19 Aligned_cols=91 Identities=22% Similarity=0.241 Sum_probs=85.1
Q ss_pred hcCCCCCcchhhhhhcCChhhhhcchhhcCCCcccccchhhhHHHHHHhcCCHHHHHHHHHCCCCcccccCCCCCcHHHH
Q psy6441 82 SQMPDGHGSIVNGMENTHLNSARLPFSVLGVSDMDRVKYLEEQLREASCLGDFEAVCELVSKGIDINAQHDMNGWTALHW 161 (464)
Q Consensus 82 ~~~~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~Gadvn~~dd~~G~TpLH~ 161 (464)
..+.+|.|+||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~-~g~tpl~~ 96 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMAN-GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDK-FGKTAFDI 96 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccc-CCCcHHHH
Confidence 3457899999999999999999999999 999999999999999999999999999999999999999965 99999999
Q ss_pred HHHcCCHHHHHHH
Q psy6441 162 AAKRGQKDIVSYL 174 (464)
Q Consensus 162 Aa~~G~~eiv~lL 174 (464)
|+..|+.+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 9999999999987
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.66 E-value=3.3e-18 Score=175.94 Aligned_cols=123 Identities=17% Similarity=0.153 Sum_probs=82.9
Q ss_pred cchhHHHHhhhHHHHHHHhcC-----------CCCCcchhhhhhcCChhhhhcchhhcCCCc---ccccchhhhHHHHHH
Q psy6441 64 KDKDVARLTMFQEIELVLSQM-----------PDGHGSIVNGMENTHLNSARLPFSVLGVSD---MDRVKYLEEQLREAS 129 (464)
Q Consensus 64 ~~~~~a~l~~~~ei~~ll~~~-----------~~g~TpLh~Aa~~G~~~iVk~LL~~~ga~~---~~~d~~G~TpLh~Aa 129 (464)
+..+.|...+..++...+... ..|.||||+|+..|+.++|++|++. |+++ +..+.. +||||+||
T Consensus 94 T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~-gad~~~~~i~~~~-~TpLh~Aa 171 (376)
T 2aja_A 94 VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCEL-APTEIMAMIQAEN-YHAFRLAA 171 (376)
T ss_dssp HHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHS-CTTTHHHHHSHHH-HHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhC-CCCccccccCCCC-CCHHHHHH
Confidence 455555555555544444322 1345688888888888888888877 6542 222223 78888888
Q ss_pred hcCCHHHHHHHHHCCCCccc--ccCCCCCcHHHHHH-HcCCHHHHHHHHHCCCCCCCCCCCCCchhHhhc
Q psy6441 130 CLGDFEAVCELVSKGIDINA--QHDMNGWTALHWAA-KRGQKDIVSYLLKHGADKSLLTSKEETPLALAT 196 (464)
Q Consensus 130 ~~G~~eiVk~LL~~Gadvn~--~dd~~G~TpLH~Aa-~~G~~eiv~lLL~~GAdin~~D~~G~TPLh~A~ 196 (464)
..|+.++|++|+++|++++. .+. .|+||||+|+ ..|+.++|++|+++|++ |.||||+|+
T Consensus 172 ~~G~~eiv~~Ll~~ga~~~~~~~d~-~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa 233 (376)
T 2aja_A 172 ENGHLHVLNRLCELAPTEATAMIQA-ENYYAFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEF 233 (376)
T ss_dssp HTTCHHHHHHHHHSCGGGHHHHHHH-HHHHHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTT
T ss_pred HCCCHHHHHHHHHcCCccchhccCC-CCCCHHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHH
Confidence 88888888888888877765 543 6778888888 88888888888777653 667777774
No 114
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.62 E-value=1e-15 Score=157.00 Aligned_cols=126 Identities=17% Similarity=0.077 Sum_probs=108.6
Q ss_pred cccchhhhHHHHHHhc-CCHHHHHHHHHCCCCcccccC-CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchhH
Q psy6441 116 DRVKYLEEQLREASCL-GDFEAVCELVSKGIDINAQHD-MNGWTALHWAAKRGQKDIVSYLLKHGADKSLLTSKEETPLA 193 (464)
Q Consensus 116 ~~d~~G~TpLh~Aa~~-G~~eiVk~LL~~Gadvn~~dd-~~G~TpLH~Aa~~G~~eiv~lLL~~GAdin~~D~~G~TPLh 193 (464)
.....+.|+||+|+.. |+.+++++|+++|+++|..+. ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||
T Consensus 194 l~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh 273 (368)
T 3jue_A 194 LGSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLH 273 (368)
T ss_dssp ---CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 3445678999999999 999999999999999999851 58999999999999999999999999999999999999999
Q ss_pred hhc---cHHHHHHHhCCCCCcccCCCCCCCcccccCCCCcHHHHHHHHhCC
Q psy6441 194 LAT---KPEVRILLGGEPGVTINTADLPIVPNYIKNEPLDPRVNDYQVSNQ 241 (464)
Q Consensus 194 ~A~---~~~i~~LL~~~~~~~~~~~~~~~tpl~laa~~~h~a~~~~l~sn~ 241 (464)
+|+ +.+++++|...+......+..+.||+++|....+..++.+|+..+
T Consensus 274 ~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~ 324 (368)
T 3jue_A 274 HATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAK 324 (368)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 996 567888875444333556778899999999999999999988654
No 115
>1y29_A Huwentoxin-X; A double-stranded beta-sheet, ICK, knottin; NMR {Synthetic} SCOP: g.3.6.2
Probab=45.72 E-value=7.3 Score=24.04 Aligned_cols=15 Identities=47% Similarity=0.946 Sum_probs=13.1
Q ss_pred eeccccccccccccc
Q psy6441 427 FCTRTTEEIPVCGVH 441 (464)
Q Consensus 427 ~~~~~~~~~~~~~~~ 441 (464)
-|.|.+..||-||+-
T Consensus 8 pC~~~~~riPCCG~C 22 (28)
T 1y29_A 8 PCYGATQKIPCCGVC 22 (28)
T ss_dssp CCCTTCCSCCBSSCB
T ss_pred cccCCcccccccccc
Confidence 488999999999974
No 116
>1j8c_A Ubiquitin-like protein hplic-2; ubiquitin-like domain, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=39.65 E-value=28 Score=29.26 Aligned_cols=58 Identities=9% Similarity=0.224 Sum_probs=37.5
Q ss_pred hhhccccccccHHHHHHHHhhhcCCCCccchhhhhcCCccccccchhhhh--hcCCCeEEEEeec
Q psy6441 322 EIELNRLTELTYYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVAR--LTMFQEIELVLSQ 384 (464)
Q Consensus 322 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~ 384 (464)
+++++. ..|...|...++++.|+. +++.. +. .-...|.+|+-+.- +++...|.|++..
T Consensus 45 ~l~v~~--~~TV~~LK~~I~~~~gip-~~~Qr-Li-~~Gk~L~D~~tL~dygI~~gstI~lv~~~ 104 (125)
T 1j8c_A 45 EFAVPE--NSSVQQFKEAISKRFKSQ-TDQLV-LI-FAGKILKDQDTLIQHGIHDGLTVHLVIKR 104 (125)
T ss_dssp EEEECT--TCCHHHHHHHHHHHHCSC-SSSEE-EE-ETTEEESTTSCGGGTTCSSSEEEEEEEC-
T ss_pred EEEECC--CCcHHHHHHHHHHHHCcC-cceEE-EE-ECCEEcCCCCCHHHcCCCCCCEEEEEecc
Confidence 445543 469999999999999998 55432 22 12345566655553 4677788887765
No 117
>1ryj_A Unknown; beta/alpha protein, structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.15.3.2
Probab=38.74 E-value=8.9 Score=28.87 Aligned_cols=61 Identities=20% Similarity=0.197 Sum_probs=38.0
Q ss_pred hhhccCCCCchhhhhccccccccHHHHHHHHhhhcCCCCccchhhhhcCCccccccchhhhhhcCCCeEEEEe
Q psy6441 310 VRIAQDMDDDFIEIELNRLTELTYYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVL 382 (464)
Q Consensus 310 ~r~~~~~~~df~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 382 (464)
|+|.-+++..=.+++++. . .|...|++ +|++. ++.+ +-.+-..++.+|. .|++.+++|++-
T Consensus 5 m~i~vNg~~~~~~~~~~~-~-~tv~~Ll~----~l~~~-~~~v--~vavN~~~v~~~~---~L~~gD~V~ii~ 65 (70)
T 1ryj_A 5 MKFTVITDDGKKILESGA-P-RRIKDVLG----ELEIP-IETV--VVKKNGQIVIDEE---EIFDGDIIEVIR 65 (70)
T ss_dssp EEEEEEETTEEEEEEESS-C-CBHHHHHH----HTTCC-TTTE--EEEETTEECCTTS---BCCTTCEEEEEE
T ss_pred EEEEEeCccCceeEECCC-C-CcHHHHHH----HhCCC-CCCE--EEEECCEECCCcc---cCCCCCEEEEEe
Confidence 444444443223346654 3 78899987 45666 5544 2445556666665 899999999984
No 118
>2l76_A Nfatc2-interacting protein; ubiquitin-like domain, structural genomics, PSI-biology, Pro structure initiative; NMR {Homo sapiens}
Probab=37.08 E-value=17 Score=29.48 Aligned_cols=76 Identities=18% Similarity=0.206 Sum_probs=50.4
Q ss_pred cccchhhhhhhhhccCCCCchhhhhccccccccHHHHHHHHhhhcCCCCccchhhhhcCCccccccc--hhhhhhcCCCe
Q psy6441 300 PAQLDELVLKVRIAQDMDDDFIEIELNRLTELTYYSLLNICCKELNIDSPQTILKIRKLPNTIIRKD--KDVARLTMFQE 377 (464)
Q Consensus 300 p~~~~~~~~~~r~~~~~~~df~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~ 377 (464)
|....++.|||| ....+-=| -+.+ .--++.|.++.|++.|++ ++.|.= .+....|+.| ++=.-+.|.+.
T Consensus 16 ~~~~~~IniKV~-~~g~ev~F---kIK~--tt~l~KL~~aYc~r~gv~-~~sirF--lfDG~rI~~~~TP~~L~meD~Di 86 (95)
T 2l76_A 16 PETPRLFPLKIR-CRADLVRL---PLRM--SEPLQSVVDHMATHLGVS-PSRILL--LFGETELSPTATPRTLKLGVADI 86 (95)
T ss_dssp CSCCCCEEEEEE-CSSSEEEE---EECS--SSCTHHHHHHHHHHHTSC-GGGEEE--EETTEECCTTSCHHHHTCCSSCE
T ss_pred CCCCCeEEEEEE-cCCcEEEE---EEec--CChHHHHHHHHHhhcCCC-hhhEEE--EECCcCCCCCCCHhHcCCCCCCE
Confidence 444556888888 44333444 4444 235799999999999999 665432 2355666654 33346889999
Q ss_pred EEEEeec
Q psy6441 378 IELVLSQ 384 (464)
Q Consensus 378 ~~~~~~~ 384 (464)
||+++.+
T Consensus 87 ID~~~~~ 93 (95)
T 2l76_A 87 IDCVVLT 93 (95)
T ss_dssp EEEEECC
T ss_pred EEEEEec
Confidence 9998764
No 119
>1yqb_A Ubiquilin 3; structural genomics consortium, ubiquitin, ubiquitin-like domain, structural genomics, signaling protein SGC; 2.00A {Homo sapiens} SCOP: d.15.1.1
Probab=36.14 E-value=33 Score=27.39 Aligned_cols=73 Identities=15% Similarity=0.254 Sum_probs=45.9
Q ss_pred hhhhccCCCCchhhhhccccccccHHHHHHHHhhhcCCCCccchhhhhcCCccccccchhhhh--hcCCCeEEEEeeccC
Q psy6441 309 KVRIAQDMDDDFIEIELNRLTELTYYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVAR--LTMFQEIELVLSQMP 386 (464)
Q Consensus 309 ~~r~~~~~~~df~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 386 (464)
+++|+..... | +++++. .-|...|...++++.|+. +++..=| .....|.+|+-+.- +++...|.|++....
T Consensus 24 ~I~Vk~~~g~-~-~l~v~~--~~TV~~LK~~I~~~~gip-~~~QrLi--~~Gk~L~D~~tL~~ygI~~gstI~l~~r~~~ 96 (100)
T 1yqb_A 24 KVTVKTPKDK-E-DFSVTD--TCTIQQLKEEISQRFKAH-PDQLVLI--FAGKILKDPDSLAQCGVRDGLTVHLVIKRQH 96 (100)
T ss_dssp EEEEECSSCE-E-EEEEET--TCBHHHHHHHHHHHHTCC-GGGEEEE--ETTEECCTTSBHHHHTCCTTCEEEEEECCCC
T ss_pred EEEEEcCCCc-E-EEEECC--CCcHHHHHHHHHHHHCcC-hhhEEEE--ECCEECCCcCcHHHCCCCCCCEEEEEEcCCC
Confidence 3344433333 4 556654 469999999999999998 5543222 23445666665554 568888888887644
Q ss_pred CC
Q psy6441 387 DG 388 (464)
Q Consensus 387 ~~ 388 (464)
.|
T Consensus 97 ~p 98 (100)
T 1yqb_A 97 RA 98 (100)
T ss_dssp SC
T ss_pred CC
Confidence 33
No 120
>2npt_A Dual specificity mitogen-activated protein kinase; MAP2K5, MEK5, MKK PRKMK5, MAP kinase kinase 5, PHOX, PHOX-domain; 1.75A {Homo sapiens} SCOP: d.15.2.2 PDB: 2o2v_A 1wi0_A
Probab=34.88 E-value=8.2 Score=31.17 Aligned_cols=40 Identities=18% Similarity=0.349 Sum_probs=29.0
Q ss_pred cchhhhhhhhhccCCCCchhhhhccccccccHHHHHHHHhhhc
Q psy6441 302 QLDELVLKVRIAQDMDDDFIEIELNRLTELTYYSLLNICCKEL 344 (464)
Q Consensus 302 ~~~~~~~~~r~~~~~~~df~~~~~~~~~~~~~~~l~~~~~~~~ 344 (464)
..+-+|+++|+.+.++-|| -.+--..|+|+++|.++.+-+
T Consensus 11 ~a~~lVIRIk~p~~g~vDw---aV~~~~~L~FrDvL~~I~~vm 50 (106)
T 2npt_A 11 ENQVLVIRIKIPNSGAVDW---TVHSGPQLLFRDVLDVIGQVL 50 (106)
T ss_dssp --CCEEEEEEETTTEEEEE---EECC--CCCHHHHHHHHHHHS
T ss_pred ccCceEEEEECCCCCcccc---ccCCcccccHHHHHHHHHHhC
Confidence 5567888888888888888 333224599999999999865
No 121
>1wx7_A Ubiquilin 3; ubiquitin-like domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=34.79 E-value=44 Score=26.75 Aligned_cols=70 Identities=16% Similarity=0.269 Sum_probs=44.2
Q ss_pred hhhhccCCCCchhhhhccccccccHHHHHHHHhhhcCCCCccchhhhhcCCccccccchhhhh--hcCCCeEEEEeecc
Q psy6441 309 KVRIAQDMDDDFIEIELNRLTELTYYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVAR--LTMFQEIELVLSQM 385 (464)
Q Consensus 309 ~~r~~~~~~~df~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 385 (464)
+|+|+..... | +++++. .-|...|...++++.++. +++..=| .-...|.+|+-+.- +++...|.|++...
T Consensus 19 ~I~Vk~~~g~-~-~l~v~~--~~TV~~LK~~I~~~~gip-~~~qrLi--~~Gk~L~D~~tL~~~gi~~g~~i~l~~~~~ 90 (106)
T 1wx7_A 19 KVTVKTPKDK-E-DFSVTD--TCTIQQLKEEISQRFKAH-PDQLVLI--FAGKILKDPDSLAQCGVRDGLTVHLVIKRQ 90 (106)
T ss_dssp EEEEECSSCE-E-EEEEET--TCCHHHHHHHHHHHHTCC-TTTEEEE--ETTEECCTTSCHHHHTCCTTEEEEEEECCC
T ss_pred EEEEEeCCCc-E-EEEECC--CCcHHHHHHHHHHHHCcC-hhhEEEE--ECCEECCCcCcHHHcCCCCCCEEEEEEcCC
Confidence 3444443333 4 556654 469999999999999998 5443222 12445566665553 56788888887653
No 122
>2jxx_A Nfatc2-interacting protein; nuclear factor of activated T-cells, cytoplasmic 2- interacting protein, ubiquitin like homologue; NMR {Homo sapiens}
Probab=30.52 E-value=12 Score=30.33 Aligned_cols=80 Identities=10% Similarity=0.091 Sum_probs=42.6
Q ss_pred CCCccccccchhhhhhhhhccCCCCchhhhhccccccccHHHHHHHHhhhcCCCCccchhhhhcC-Cccccccc--hhhh
Q psy6441 294 HSTANTPAQLDELVLKVRIAQDMDDDFIEIELNRLTELTYYSLLNICCKELNIDSPQTILKIRKL-PNTIIRKD--KDVA 370 (464)
Q Consensus 294 ~~tg~~p~~~~~~~~~~r~~~~~~~df~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~--~~~~ 370 (464)
-+++.-+...+-+.|||+-+...+.-|+-| .+ .-.+..|+++.|++.|++ ++. +|-+ -...|+.| .+=.
T Consensus 14 ~~~~~~~~~~~~I~LkV~~~dg~~~v~fkI--k~--~t~l~kLm~aY~~~~g~~-~~~---vrF~FDG~rI~~~~TP~dL 85 (97)
T 2jxx_A 14 LVPRGSTETSQQLQLRVQGKEKHQTLEVSL--SR--DSPLKTLMSHYEEAMGLS-GRK---LSFFFDGTKLSGRELPADL 85 (97)
T ss_dssp ------CCSCSEEEEEEEESSSSCEEEEEE--ET--TSCHHHHHHHHHHHTTCS-SSC---CEEEETTEECCSCSCHHHH
T ss_pred cCCCCCCCCCCeEEEEEEcCCCCEEEEEEE--CC--CChHHHHHHHHHHHHCCC-ccc---EEEEECCEEcCCCCCHHHc
Confidence 333443334444555555444433334333 33 357999999999999998 553 3322 33344433 2234
Q ss_pred hhcCCCeEEEE
Q psy6441 371 RLTMFQEIELV 381 (464)
Q Consensus 371 ~~~~~~~~~~~ 381 (464)
-+.|.+.|||.
T Consensus 86 dMEDgD~IDv~ 96 (97)
T 2jxx_A 86 GMESGDLIEVW 96 (97)
T ss_dssp TCCTTEEEEEE
T ss_pred CCCCCCEEEEe
Confidence 56778888774
No 123
>2l32_A Small archaeal modifier protein 2; protein BIN; NMR {Haloferax volcanii}
Probab=27.36 E-value=29 Score=26.51 Aligned_cols=51 Identities=12% Similarity=0.307 Sum_probs=37.8
Q ss_pred hhhhhccccccccHHHHHHHHhhhcCCCCccchhhhhcCCccccccchhhhhhcCCCeEEEEee
Q psy6441 320 FIEIELNRLTELTYYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELVLS 383 (464)
Q Consensus 320 f~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (464)
+.++|++. ..|+.+||+ +||++ ++.| +-..-...+.+|. .+ +.+++||+-.
T Consensus 12 ~~~~ev~~--g~Tv~dLL~----~Lgl~-~~~V--vV~vNG~~v~~d~---~l-~GD~VeIv~~ 62 (74)
T 2l32_A 12 TSEVAVDD--DGTYADLVR----AVDLS-PHEV--TVLVDGRPVPEDQ---SV-EVDRVKVLRL 62 (74)
T ss_dssp EEEEECST--TCSHHHHHH----TTCCC-SSCC--CEECCCCCCCTTS---SS-CCCCEEECSS
T ss_pred ceeEEcCC--CCcHHHHHH----HcCCC-cceE--EEEECCEECCHHH---CC-CCCEEEEEEe
Confidence 45567765 379999985 89999 8877 5666666777776 34 5999999854
No 124
>3a4r_A Nfatc2-interacting protein; ubiquitin fold, coiled coil, cytoplasm, methylation, nucleus, transcription; 1.00A {Mus musculus} PDB: 3a4s_C 3rd2_A
Probab=25.71 E-value=17 Score=27.96 Aligned_cols=74 Identities=16% Similarity=0.099 Sum_probs=43.3
Q ss_pred cccchhhhhhhhhccCCCCchhhhhccccccccHHHHHHHHhhhcCCCCccchhhhhcC-Cccccccchhh--hhhcCCC
Q psy6441 300 PAQLDELVLKVRIAQDMDDDFIEIELNRLTELTYYSLLNICCKELNIDSPQTILKIRKL-PNTIIRKDKDV--ARLTMFQ 376 (464)
Q Consensus 300 p~~~~~~~~~~r~~~~~~~df~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~--~~~~~~~ 376 (464)
|...+-+.|||+-+...+.-++ .+.+ .-++..|.+.+|++.|++ +++ +|-+ -...|+.|+=. .-++|.+
T Consensus 2 p~~~~~i~ikV~~~~g~~~i~~--~i~~--~t~l~kl~~~y~~~~gi~-~~~---~rf~fdG~~l~~~~Tp~~l~medgD 73 (79)
T 3a4r_A 2 PLGSQELRLRVQGKEKHQMLEI--SLSP--DSPLKVLMSHYEEAMGLS-GHK---LSFFFDGTKLSGKELPADLGLESGD 73 (79)
T ss_dssp TTCCCCEEEEEECSSTTCEEEE--EECT--TSCHHHHHHHHHHHHTCT-TCC---CEEEETTEECCSCCCHHHHTCCTTC
T ss_pred CCCCCEEEEEEEeCCCCEEEEE--EECC--CChHHHHHHHHHHHhCCC-ccc---EEEEECCEEcCCCCCHHHcCCCCCC
Confidence 3334445555554433322333 4433 348999999999999999 664 3433 34445544322 3366888
Q ss_pred eEEEE
Q psy6441 377 EIELV 381 (464)
Q Consensus 377 ~~~~~ 381 (464)
.|+|.
T Consensus 74 ~Idv~ 78 (79)
T 3a4r_A 74 LIEVW 78 (79)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88874
No 125
>4hcn_B Polyubiquitin, ubiquitin; ubiquitin/NEDD8 deamidase, NEDD8, protein binding; 2.60A {Saccharomyces cerevisiae}
Probab=24.80 E-value=33 Score=27.09 Aligned_cols=69 Identities=10% Similarity=0.172 Sum_probs=42.0
Q ss_pred hhhhccCCCCchhhhhccccccccHHHHHHHHhhhcCCCCccchhhhhcCCccccccchhhhh--hcCCCeEEEEee
Q psy6441 309 KVRIAQDMDDDFIEIELNRLTELTYYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVAR--LTMFQEIELVLS 383 (464)
Q Consensus 309 ~~r~~~~~~~df~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~ 383 (464)
++.|+......| .++++. .-|-..|...++++.++. +++. ++. .-...|.+|+-+.. +++...|.|++.
T Consensus 24 ~I~Vk~~~g~~~-~l~v~~--~~TV~~LK~~I~~~~gip-~~~q-rLi-~~Gk~L~D~~tL~~~~i~~g~~i~l~~r 94 (98)
T 4hcn_B 24 QIFVKTLTGKTI-TLEVES--SDTIDNVKSKIQDKEGIP-PDQQ-RLI-FAGKQLEDGRTLSDYNIQKESTLHLVLR 94 (98)
T ss_dssp EEEEEETTCCEE-EEECCT--TCBHHHHHHHHHHHHCCC-GGGC-EEE-ETTEECCTTCBSGGGTCCTTEEEEEECB
T ss_pred EEEEEeCCCCEE-EEEECC--CCcHHHHHHHHHHHhCCC-hhHE-EEE-ECCEECCCCCcHHHCCCCCCCEEEEEEe
Confidence 444444343333 445544 469999999999999998 5543 222 12344555554444 467778888765
No 126
>3k63_A Conserved hypothetical membrane lipoprotein; Q9PRA0, PF04200, DUF1976, UUR17A, NESG., structural genomics, PSI-2, protein structure initiative; 2.49A {Ureaplasma parvum} PDB: 3jvc_A
Probab=24.31 E-value=23 Score=29.38 Aligned_cols=27 Identities=44% Similarity=0.815 Sum_probs=19.7
Q ss_pred ccccccccc-CCCCCCCCCCCCCCCccccc
Q psy6441 433 EEIPVCGVH-DPLGSLQGENDIIPGLEDHF 461 (464)
Q Consensus 433 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 461 (464)
+-|||-|.- .|.|- .||+.|||||.|-
T Consensus 96 ~~i~v~~FKTNpyG~--DEngtiP~~~~~~ 123 (126)
T 3k63_A 96 KLLEVSGFKSNPYGV--DENGTIPGLEHHH 123 (126)
T ss_dssp EEEEECCSCCCTTCC--CTTCCCTTCC---
T ss_pred EEEEecccccCCCCc--CcCCCCCCccccc
Confidence 568888874 68874 7999999999874
No 127
>3kyd_D Small ubiquitin-related modifier 1; SUMO, thioester, adenylation, inhibitor, TETR intermediate, ligase, nucleus, phosphoprotein; HET: VMX; 2.61A {Homo sapiens} SCOP: d.15.1.1
Probab=23.15 E-value=28 Score=29.16 Aligned_cols=57 Identities=11% Similarity=0.126 Sum_probs=37.7
Q ss_pred hhccccccccHHHHHHHHhhhcCCCCccchhhhhcCCccccccc--hhhhhhcCCCeEEEEeec
Q psy6441 323 IELNRLTELTYYSLLNICCKELNIDSPQTILKIRKLPNTIIRKD--KDVARLTMFQEIELVLSQ 384 (464)
Q Consensus 323 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~ 384 (464)
+.+.+ .-++..|..+.|++.|++ ++.+.=+ .-...|+.+ .+=.-+.|.+.|||++..
T Consensus 55 fkIk~--tt~L~KLm~aY~er~Gl~-~~~irFl--FDG~rI~~~~TP~dL~MEDgD~IdV~~~Q 113 (115)
T 3kyd_D 55 FKVKM--TTHLKKLKESYCQRQGVP-MNSLRFL--FEGQRIADNHTPKELGMEEEDVIEVYQEQ 113 (115)
T ss_dssp EEEET--TSCTHHHHHHHHHHHTCC-TTSEEEE--ETTEECCTTCCTTTTTCCTTCEEEEEECC
T ss_pred EEEcc--CChHHHHHHHHHHHhCCC-hhhEEEE--ECCeECCCCCCHHHcCCCCCCEEEEEeec
Confidence 35544 357899999999999998 5543321 133444433 223458899999999864
No 128
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=22.95 E-value=33 Score=29.97 Aligned_cols=44 Identities=30% Similarity=0.546 Sum_probs=21.2
Q ss_pred CCchhhhhcccccc-------ccHHHHHHHHhhhc-----CCCCccchhhhhcCCcc
Q psy6441 317 DDDFIEIELNRLTE-------LTYYSLLNICCKEL-----NIDSPQTILKIRKLPNT 361 (464)
Q Consensus 317 ~~df~~~~~~~~~~-------~~~~~l~~~~~~~~-----~~~~~~~~~~~~~l~~~ 361 (464)
|.+|+.|+-..|.+ |....|+..||+.+ |-+ |+.|.++-.++|-
T Consensus 87 D~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt-~eeir~~f~I~nd 142 (160)
T 2p1m_A 87 DADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKT-PEEIRTTFNIKND 142 (160)
T ss_dssp --------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCC-HHHHHHHTTCCCC
T ss_pred HHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-HHHHHHHcCCCCC
Confidence 56677666655443 56789999999988 223 6666666666653
No 129
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=21.54 E-value=37 Score=31.07 Aligned_cols=76 Identities=12% Similarity=0.062 Sum_probs=47.7
Q ss_pred cchhhhhhhhhccCCCCchhhhhccccccccHHHHHHHHhhhcCCCCccchhhhhcCCccccccchhhhhhcCCCeEEEE
Q psy6441 302 QLDELVLKVRIAQDMDDDFIEIELNRLTELTYYSLLNICCKELNIDSPQTILKIRKLPNTIIRKDKDVARLTMFQEIELV 381 (464)
Q Consensus 302 ~~~~~~~~~r~~~~~~~df~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 381 (464)
..+-+.|||+ ..+ +. +++.+.+ .-.+..|.++.|++.|++ ++++.=+-.=--.--.+...-..+.|.+.||+.
T Consensus 18 ~~~~i~ikv~--~~~-~~-v~~~i~~--~~~l~kl~~~y~~~~g~~-~~~~~f~fdG~~i~~~~Tpk~L~~ed~d~I~~~ 90 (209)
T 3uf8_A 18 PETHINLKVS--DGS-SE-IFFKIKK--TTPLRRLMEAFAKRQGKE-MDSLRFLYDGIRIQADQTPEDLDMEDNDIIEAH 90 (209)
T ss_dssp CCSEEEEEEE--CSS-CE-EEEEEET--TSCTHHHHHHHHHHHTCC-GGGCEEEETTEECCTTCCTTTTTCCTTEEEEEE
T ss_pred CCCcEEEEEE--cCC-CE-EEEEEee--CCHHHHHHHHHHHhhCCC-hheEEEEECCEeccCCCChHHhhhcccccchhh
Confidence 3444666665 322 22 2335544 457899999999999999 665543322111222355556677899999999
Q ss_pred eec
Q psy6441 382 LSQ 384 (464)
Q Consensus 382 ~~~ 384 (464)
...
T Consensus 91 ~eq 93 (209)
T 3uf8_A 91 REQ 93 (209)
T ss_dssp CSC
T ss_pred ccc
Confidence 886
No 130
>2d07_B Ubiquitin-like protein SMT3B; hydrolase; 2.10A {Homo sapiens} SCOP: d.15.1.1 PDB: 2rpq_A 2awt_A 2io3_B 2iyd_B 1u4a_A 2k1f_A
Probab=20.51 E-value=45 Score=26.41 Aligned_cols=72 Identities=17% Similarity=0.246 Sum_probs=45.3
Q ss_pred hhhhhhhhhccCCCCchhhhhccccccccHHHHHHHHhhhcCCCCccchhhhhcC-Cccccccchhh--hhhcCCCeEEE
Q psy6441 304 DELVLKVRIAQDMDDDFIEIELNRLTELTYYSLLNICCKELNIDSPQTILKIRKL-PNTIIRKDKDV--ARLTMFQEIEL 380 (464)
Q Consensus 304 ~~~~~~~r~~~~~~~df~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~--~~~~~~~~~~~ 380 (464)
..+.|||+-+... . |++.+.+ .-++..|.+.+|++.|++ ++ .+|-+ -...|+.|.=. .-++|.+.|+|
T Consensus 16 ~~i~ikV~~~~g~-~--i~~~v~~--~t~l~kl~~~y~~~~gi~-~~---~~rf~fdG~~l~~~~Tp~dl~medgD~Idv 86 (93)
T 2d07_B 16 DHINLKVAGQDGS-V--VQFKIKR--HTPLSKLMKAYCERQGLS-MR---QIRFRFDGQPINETDTPAQLEMEDEDTIDV 86 (93)
T ss_dssp CEEEEEEECTTSC-E--EEEEEET--TSCHHHHHHHHHHHHTCC-GG---GEEEEETTEECCTTCCTTTTTCCTTEEEEE
T ss_pred CeEEEEEECCCCC-E--EEEEEcc--CCHHHHHHHHHHHHhCCC-cc---ceEEEECCEEcCCCCCHHHcCCCCCCEEEE
Confidence 3455555533222 2 2345555 348999999999999999 66 44444 44455544222 34778999999
Q ss_pred Eeec
Q psy6441 381 VLSQ 384 (464)
Q Consensus 381 ~~~~ 384 (464)
++..
T Consensus 87 ~~~q 90 (93)
T 2d07_B 87 FQQQ 90 (93)
T ss_dssp EECC
T ss_pred Eeec
Confidence 9864
No 131
>3tei_B Ribosomal protein S6 kinase alpha-1; transferase; HET: ANP; 2.40A {Homo sapiens}
Probab=20.10 E-value=31 Score=20.49 Aligned_cols=12 Identities=42% Similarity=0.789 Sum_probs=9.4
Q ss_pred hhhhcCCccccc
Q psy6441 353 LKIRKLPNTIIR 364 (464)
Q Consensus 353 ~~~~~l~~~~~~ 364 (464)
.++||||.|.+.
T Consensus 14 rrvrklpsttl~ 25 (26)
T 3tei_B 14 RRVRKLPSTTLX 25 (26)
T ss_pred HHHhhCCccccc
Confidence 578999998763
Done!