Query psy6442
Match_columns 231
No_of_seqs 162 out of 1889
Neff 9.9
Searched_HMMs 46136
Date Fri Aug 16 18:01:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6442.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6442hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0278|consensus 100.0 6.3E-38 1.4E-42 236.1 18.3 207 1-209 35-311 (334)
2 KOG0271|consensus 100.0 4.3E-33 9.4E-38 220.7 16.9 205 1-205 133-407 (480)
3 KOG0272|consensus 100.0 3.4E-31 7.3E-36 212.0 15.8 207 1-209 193-432 (459)
4 KOG0272|consensus 100.0 6.9E-31 1.5E-35 210.2 15.3 191 1-193 237-458 (459)
5 KOG0315|consensus 100.0 1.6E-29 3.4E-34 190.6 19.7 220 1-222 16-281 (311)
6 KOG0263|consensus 100.0 1.5E-29 3.2E-34 215.7 16.0 201 3-221 429-632 (707)
7 KOG0273|consensus 100.0 1.1E-28 2.4E-33 199.9 19.6 218 1-221 253-506 (524)
8 KOG0295|consensus 100.0 1.1E-28 2.4E-33 194.5 18.8 210 2-214 127-382 (406)
9 KOG0263|consensus 100.0 9.9E-29 2.1E-33 210.7 17.7 180 1-197 469-651 (707)
10 KOG0279|consensus 100.0 7.5E-28 1.6E-32 184.0 20.2 202 1-219 34-244 (315)
11 KOG0271|consensus 100.0 9.1E-28 2E-32 190.6 17.8 190 1-193 223-479 (480)
12 KOG0286|consensus 100.0 3.2E-27 7E-32 181.7 19.0 177 1-193 162-343 (343)
13 KOG0279|consensus 100.0 8.4E-27 1.8E-31 178.3 19.0 183 1-203 81-270 (315)
14 KOG0291|consensus 100.0 2E-26 4.2E-31 196.0 22.1 208 1-225 326-537 (893)
15 KOG0643|consensus 100.0 3.3E-26 7.2E-31 174.2 21.0 201 1-218 28-243 (327)
16 KOG0286|consensus 99.9 1.4E-25 2.9E-30 172.8 22.7 217 1-220 73-327 (343)
17 KOG0289|consensus 99.9 6.2E-26 1.4E-30 182.5 18.7 211 1-226 237-450 (506)
18 KOG0282|consensus 99.9 1.4E-26 3.1E-31 188.2 12.7 189 1-206 233-473 (503)
19 KOG0285|consensus 99.9 3.2E-25 6.9E-30 174.9 16.8 171 16-203 142-315 (460)
20 KOG0315|consensus 99.9 4.3E-24 9.4E-29 161.3 21.9 201 5-205 61-298 (311)
21 KOG0293|consensus 99.9 1.3E-25 2.8E-30 179.9 14.0 196 1-196 287-514 (519)
22 KOG0265|consensus 99.9 5.1E-25 1.1E-29 170.1 16.6 179 1-196 65-247 (338)
23 KOG0277|consensus 99.9 2.4E-25 5.2E-30 168.5 14.0 209 1-224 79-307 (311)
24 KOG0266|consensus 99.9 3.5E-24 7.7E-29 183.5 23.1 191 2-209 178-378 (456)
25 KOG0313|consensus 99.9 2.7E-24 5.8E-29 170.6 20.2 223 1-226 121-413 (423)
26 KOG0288|consensus 99.9 2.7E-25 5.9E-30 177.8 13.3 203 2-223 238-446 (459)
27 KOG0276|consensus 99.9 1.7E-24 3.7E-29 181.1 17.7 203 1-218 73-288 (794)
28 KOG0281|consensus 99.9 1.3E-25 2.9E-30 176.7 9.1 190 1-198 213-431 (499)
29 KOG0266|consensus 99.9 1E-23 2.2E-28 180.7 21.6 189 1-206 221-420 (456)
30 PTZ00420 coronin; Provisional 99.9 5.3E-23 1.2E-27 177.9 26.0 187 1-203 50-257 (568)
31 KOG0291|consensus 99.9 1.7E-23 3.6E-28 178.3 20.3 182 1-200 368-555 (893)
32 KOG0316|consensus 99.9 5.4E-24 1.2E-28 159.7 14.7 183 1-204 35-222 (307)
33 PLN00181 protein SPA1-RELATED; 99.9 6E-23 1.3E-27 187.1 24.7 186 1-203 551-746 (793)
34 cd00200 WD40 WD40 domain, foun 99.9 2.4E-22 5.1E-27 159.5 24.6 216 2-220 28-273 (289)
35 KOG0285|consensus 99.9 6.7E-24 1.5E-28 167.5 15.1 203 1-222 169-374 (460)
36 KOG1446|consensus 99.9 1.5E-22 3.4E-27 157.3 22.3 187 3-205 78-272 (311)
37 PTZ00421 coronin; Provisional 99.9 1.8E-22 4E-27 173.3 25.2 191 1-205 94-300 (493)
38 KOG0284|consensus 99.9 4E-24 8.7E-29 171.0 13.8 219 1-221 114-363 (464)
39 KOG1407|consensus 99.9 6.1E-23 1.3E-27 156.0 19.3 208 19-228 14-260 (313)
40 KOG0296|consensus 99.9 6.4E-23 1.4E-27 162.1 19.1 192 1-195 82-398 (399)
41 KOG0292|consensus 99.9 4.4E-23 9.6E-28 178.4 17.1 198 4-203 30-288 (1202)
42 KOG0318|consensus 99.9 6E-22 1.3E-26 163.0 22.1 198 1-200 208-565 (603)
43 PTZ00420 coronin; Provisional 99.9 1.5E-21 3.4E-26 168.9 25.5 184 1-198 93-296 (568)
44 KOG0316|consensus 99.9 2.5E-22 5.5E-27 150.8 17.0 191 1-193 77-297 (307)
45 KOG1332|consensus 99.9 5.9E-23 1.3E-27 154.8 13.3 210 1-225 29-273 (299)
46 KOG0282|consensus 99.9 2.3E-23 4.9E-28 169.7 11.3 191 16-222 205-399 (503)
47 cd00200 WD40 WD40 domain, foun 99.9 4.1E-21 8.9E-26 152.3 23.5 191 1-193 69-289 (289)
48 KOG0645|consensus 99.9 4.3E-21 9.3E-26 146.6 22.3 176 17-194 6-224 (312)
49 KOG0265|consensus 99.9 3E-22 6.5E-27 154.8 15.9 193 1-193 108-336 (338)
50 KOG0284|consensus 99.9 4.3E-23 9.2E-28 165.2 11.3 178 1-194 198-379 (464)
51 PLN00181 protein SPA1-RELATED; 99.9 5.3E-21 1.1E-25 174.4 25.5 192 4-197 457-692 (793)
52 PTZ00421 coronin; Provisional 99.9 5.5E-21 1.2E-25 164.2 24.1 174 9-198 56-248 (493)
53 KOG0273|consensus 99.9 2.1E-21 4.5E-26 158.0 19.5 184 26-211 236-457 (524)
54 KOG0319|consensus 99.9 8E-22 1.7E-26 167.7 17.3 195 1-197 383-621 (775)
55 KOG0274|consensus 99.9 2E-21 4.2E-26 167.6 20.0 179 1-200 224-406 (537)
56 KOG0296|consensus 99.9 7.5E-21 1.6E-25 150.4 21.2 172 16-204 55-229 (399)
57 KOG0310|consensus 99.9 1.9E-21 4E-26 158.7 17.8 201 1-218 86-291 (487)
58 KOG0268|consensus 99.9 4.8E-22 1E-26 157.2 12.7 193 1-199 85-306 (433)
59 KOG0646|consensus 99.9 3.6E-21 7.9E-26 156.3 17.8 181 3-200 101-312 (476)
60 KOG0305|consensus 99.9 5E-21 1.1E-25 160.5 18.6 195 1-199 235-465 (484)
61 KOG0283|consensus 99.9 4.9E-21 1.1E-25 164.9 18.8 179 1-195 386-576 (712)
62 KOG1407|consensus 99.9 7.5E-21 1.6E-25 144.7 17.6 219 1-222 38-286 (313)
63 KOG0319|consensus 99.9 5.4E-21 1.2E-25 162.7 18.2 195 4-201 345-583 (775)
64 KOG0274|consensus 99.9 4.5E-21 9.7E-26 165.4 18.1 182 1-205 267-451 (537)
65 KOG0640|consensus 99.9 4.7E-21 1E-25 149.1 16.0 188 18-205 105-345 (430)
66 KOG0318|consensus 99.9 3.5E-20 7.7E-25 152.7 21.9 183 1-200 166-355 (603)
67 KOG0294|consensus 99.9 9.3E-21 2E-25 147.5 17.3 179 1-197 103-283 (362)
68 KOG0281|consensus 99.9 1.6E-21 3.5E-26 153.8 12.4 190 1-200 253-482 (499)
69 KOG0647|consensus 99.9 9.4E-21 2E-25 146.7 16.3 196 1-199 46-285 (347)
70 KOG0310|consensus 99.9 2.7E-20 5.8E-25 152.0 19.3 181 1-198 129-312 (487)
71 KOG0300|consensus 99.9 1.4E-20 3E-25 147.1 16.7 192 1-196 166-429 (481)
72 KOG0283|consensus 99.9 1.9E-20 4E-25 161.4 19.0 158 51-211 379-548 (712)
73 KOG0275|consensus 99.9 3.9E-21 8.5E-26 150.5 13.2 190 1-193 281-507 (508)
74 KOG0643|consensus 99.9 1.3E-20 2.8E-25 143.8 15.2 192 1-195 70-317 (327)
75 KOG2096|consensus 99.9 6.4E-21 1.4E-25 148.8 13.5 159 18-194 79-307 (420)
76 KOG0277|consensus 99.9 1.3E-20 2.9E-25 142.9 14.4 178 2-194 124-308 (311)
77 KOG0306|consensus 99.9 1.2E-20 2.6E-25 161.0 15.8 186 2-204 431-631 (888)
78 KOG0313|consensus 99.9 3.7E-20 8E-25 147.2 17.0 192 1-195 165-418 (423)
79 KOG1036|consensus 99.9 3.3E-20 7.1E-25 144.0 16.2 203 2-225 72-291 (323)
80 KOG0295|consensus 99.9 9.8E-20 2.1E-24 144.1 18.9 177 1-194 211-405 (406)
81 KOG0973|consensus 99.9 9E-20 1.9E-24 160.9 20.4 221 3-223 35-340 (942)
82 KOG0302|consensus 99.8 6.8E-20 1.5E-24 145.7 15.2 182 2-199 172-382 (440)
83 KOG0645|consensus 99.8 4.2E-19 9E-24 135.8 18.7 188 1-195 79-311 (312)
84 KOG0293|consensus 99.8 2.4E-19 5.2E-24 144.1 17.7 214 1-218 242-492 (519)
85 KOG0264|consensus 99.8 1.4E-19 3E-24 146.6 16.4 211 2-228 144-379 (422)
86 KOG0308|consensus 99.8 6.6E-20 1.4E-24 154.3 13.4 186 1-201 43-249 (735)
87 KOG0267|consensus 99.8 1.3E-20 2.9E-25 160.1 8.6 185 1-202 46-233 (825)
88 KOG0275|consensus 99.8 1.4E-20 3.1E-25 147.4 8.0 164 24-204 212-387 (508)
89 TIGR03866 PQQ_ABC_repeats PQQ- 99.8 1.2E-17 2.5E-22 135.1 24.0 185 2-204 8-196 (300)
90 KOG0276|consensus 99.8 8.8E-19 1.9E-23 147.2 16.6 202 4-222 34-251 (794)
91 KOG0299|consensus 99.8 7.1E-19 1.5E-23 142.9 15.5 202 1-221 220-438 (479)
92 KOG0269|consensus 99.8 1.9E-19 4.2E-24 154.1 12.3 179 1-196 106-297 (839)
93 KOG0301|consensus 99.8 3E-18 6.5E-23 145.3 18.8 189 1-198 77-291 (745)
94 KOG0289|consensus 99.8 4.9E-18 1.1E-22 137.3 16.9 194 1-194 279-505 (506)
95 KOG0305|consensus 99.8 4.1E-18 9E-23 143.1 16.2 183 2-202 194-383 (484)
96 KOG0641|consensus 99.8 2.6E-17 5.7E-22 123.5 18.5 170 22-194 86-348 (350)
97 KOG0301|consensus 99.8 5.6E-18 1.2E-22 143.7 15.5 187 1-195 31-249 (745)
98 TIGR03866 PQQ_ABC_repeats PQQ- 99.8 2.2E-16 4.8E-21 127.6 23.9 202 2-222 50-262 (300)
99 KOG0308|consensus 99.8 1.2E-17 2.7E-22 140.8 15.9 181 1-197 91-287 (735)
100 KOG0772|consensus 99.8 1.6E-17 3.5E-22 137.0 16.1 191 19-209 161-409 (641)
101 KOG4283|consensus 99.8 4.1E-17 8.9E-22 126.5 16.4 162 22-197 40-221 (397)
102 KOG0270|consensus 99.8 1.9E-17 4.2E-22 134.1 15.0 162 23-199 241-408 (463)
103 KOG0264|consensus 99.8 3.4E-17 7.4E-22 132.9 16.2 180 1-195 196-404 (422)
104 KOG0288|consensus 99.8 3.3E-17 7.3E-22 131.8 15.3 173 1-193 279-459 (459)
105 KOG0268|consensus 99.8 1.6E-17 3.6E-22 131.7 12.5 146 52-198 200-348 (433)
106 KOG0321|consensus 99.7 5.1E-17 1.1E-21 136.9 15.7 196 2-197 119-393 (720)
107 KOG2445|consensus 99.7 2.8E-16 6E-21 122.5 18.5 182 1-196 31-257 (361)
108 KOG0307|consensus 99.7 5E-18 1.1E-22 150.8 9.0 203 1-218 86-306 (1049)
109 KOG0639|consensus 99.7 2.3E-17 5E-22 135.8 12.2 176 1-194 527-703 (705)
110 KOG1273|consensus 99.7 1.5E-16 3.3E-21 124.4 16.1 180 1-195 41-226 (405)
111 KOG1539|consensus 99.7 3.2E-16 6.9E-21 135.5 19.4 139 81-223 493-632 (910)
112 KOG0973|consensus 99.7 2E-16 4.2E-21 140.1 17.2 184 1-199 147-359 (942)
113 KOG0292|consensus 99.7 7.5E-17 1.6E-21 140.3 14.1 162 21-198 5-168 (1202)
114 KOG4283|consensus 99.7 2.8E-16 6E-21 122.0 15.5 190 1-198 62-279 (397)
115 KOG1408|consensus 99.7 1.9E-16 4.2E-21 135.2 15.4 170 26-195 460-713 (1080)
116 KOG0278|consensus 99.7 2.7E-17 5.8E-22 124.9 9.2 195 20-218 9-236 (334)
117 KOG0639|consensus 99.7 2.6E-16 5.7E-21 129.7 15.2 224 3-229 438-704 (705)
118 KOG0270|consensus 99.7 9.9E-16 2.2E-20 124.3 17.8 185 1-200 262-454 (463)
119 KOG1446|consensus 99.7 7.5E-15 1.6E-19 114.7 21.2 191 2-210 33-232 (311)
120 KOG0306|consensus 99.7 1.5E-15 3.3E-20 130.2 18.6 176 3-197 392-582 (888)
121 KOG0267|consensus 99.7 3.9E-17 8.4E-22 139.3 8.4 170 1-187 88-260 (825)
122 KOG0640|consensus 99.7 1.7E-15 3.7E-20 118.4 16.7 179 16-194 163-425 (430)
123 KOG0300|consensus 99.7 7.4E-16 1.6E-20 120.8 14.5 179 2-198 291-479 (481)
124 KOG0303|consensus 99.7 2.4E-16 5.2E-21 126.4 11.2 153 20-221 76-229 (472)
125 KOG0642|consensus 99.7 3.8E-16 8.3E-21 130.0 11.7 198 1-200 312-566 (577)
126 KOG2106|consensus 99.7 1.9E-14 4.1E-19 118.8 21.3 190 3-198 265-524 (626)
127 KOG0647|consensus 99.7 3.1E-15 6.8E-20 116.3 15.9 160 23-199 25-188 (347)
128 KOG1274|consensus 99.7 4.8E-15 1E-19 129.5 18.1 181 23-223 11-204 (933)
129 KOG0294|consensus 99.7 8.1E-15 1.8E-19 114.6 17.3 186 1-204 59-246 (362)
130 KOG4378|consensus 99.7 3E-15 6.4E-20 123.3 14.6 201 1-219 97-304 (673)
131 KOG0772|consensus 99.7 2.5E-15 5.5E-20 124.2 13.6 175 1-192 287-484 (641)
132 KOG4328|consensus 99.7 2E-15 4.4E-20 123.0 12.7 177 1-194 206-398 (498)
133 KOG1539|consensus 99.7 4.4E-15 9.6E-20 128.6 15.4 175 2-194 467-647 (910)
134 KOG0650|consensus 99.7 3.2E-15 6.9E-20 125.5 14.1 192 1-194 418-679 (733)
135 KOG1274|consensus 99.7 2.4E-14 5.1E-19 125.2 19.7 193 1-195 31-262 (933)
136 KOG0299|consensus 99.6 5.7E-15 1.2E-19 120.4 13.8 166 1-183 262-443 (479)
137 KOG0269|consensus 99.6 2.1E-15 4.5E-20 129.7 11.7 148 51-199 99-254 (839)
138 KOG1188|consensus 99.6 3.1E-15 6.7E-20 118.0 11.1 167 3-220 48-223 (376)
139 KOG0302|consensus 99.6 1.9E-14 4E-19 115.0 14.9 173 5-193 234-436 (440)
140 KOG0641|consensus 99.6 1.7E-13 3.7E-18 103.1 19.1 178 17-195 25-303 (350)
141 KOG2110|consensus 99.6 1.6E-13 3.5E-18 109.5 20.0 170 54-225 58-235 (391)
142 KOG2055|consensus 99.6 4.1E-14 8.9E-19 115.6 16.8 205 1-205 231-477 (514)
143 KOG0646|consensus 99.6 2.2E-14 4.7E-19 117.2 15.1 161 1-176 141-330 (476)
144 KOG1538|consensus 99.6 6.3E-14 1.4E-18 119.3 18.0 193 2-198 30-296 (1081)
145 KOG1034|consensus 99.6 1.2E-14 2.5E-19 114.4 11.3 179 1-195 154-383 (385)
146 KOG0649|consensus 99.6 2E-13 4.4E-18 103.7 17.5 170 2-192 133-313 (325)
147 KOG2048|consensus 99.6 3.1E-13 6.7E-18 114.9 20.4 168 52-221 37-226 (691)
148 KOG0322|consensus 99.6 2E-14 4.3E-19 110.1 11.7 139 54-194 167-322 (323)
149 COG2319 FOG: WD40 repeat [Gene 99.6 1.8E-12 3.9E-17 107.7 24.4 185 3-204 132-323 (466)
150 KOG1524|consensus 99.6 3.2E-14 7E-19 118.3 13.0 183 2-204 82-265 (737)
151 KOG0303|consensus 99.6 2.1E-13 4.5E-18 109.7 17.1 185 1-200 100-299 (472)
152 KOG1408|consensus 99.6 2.2E-14 4.7E-19 122.9 12.0 221 1-227 276-564 (1080)
153 KOG0290|consensus 99.6 1.5E-13 3.3E-18 106.6 15.4 178 4-196 120-319 (364)
154 KOG4378|consensus 99.6 1E-13 2.2E-18 114.5 15.1 216 2-221 9-263 (673)
155 KOG1332|consensus 99.6 9.9E-14 2.2E-18 105.3 13.7 183 1-196 76-287 (299)
156 KOG2048|consensus 99.6 1.2E-12 2.5E-17 111.5 21.4 182 2-199 87-279 (691)
157 KOG1036|consensus 99.6 3.7E-13 7.9E-18 105.1 16.5 156 25-200 13-168 (323)
158 KOG2445|consensus 99.6 2.4E-13 5.3E-18 106.2 14.8 181 1-195 79-318 (361)
159 KOG0650|consensus 99.5 3.9E-13 8.4E-18 113.2 16.4 184 17-220 392-619 (733)
160 KOG2919|consensus 99.5 4.6E-13 1E-17 105.4 15.4 184 3-187 131-362 (406)
161 KOG0771|consensus 99.5 1.3E-13 2.8E-18 111.4 12.7 181 1-197 162-356 (398)
162 KOG2055|consensus 99.5 8.3E-13 1.8E-17 108.1 17.0 168 25-195 213-417 (514)
163 PRK01742 tolB translocation pr 99.5 1.5E-12 3.3E-17 111.2 19.0 193 4-222 183-385 (429)
164 KOG2111|consensus 99.5 1E-11 2.2E-16 97.6 20.7 171 5-196 75-257 (346)
165 KOG1007|consensus 99.5 7.9E-13 1.7E-17 102.7 13.9 164 16-195 113-289 (370)
166 KOG0649|consensus 99.5 6.8E-13 1.5E-17 100.8 12.9 164 26-208 11-199 (325)
167 KOG1034|consensus 99.5 1.5E-12 3.3E-17 102.6 14.8 167 22-201 35-217 (385)
168 KOG2919|consensus 99.5 2E-12 4.3E-17 101.9 15.3 148 51-198 122-284 (406)
169 KOG1063|consensus 99.5 1.7E-12 3.6E-17 110.9 15.3 182 2-195 166-391 (764)
170 KOG2096|consensus 99.5 3.5E-12 7.7E-17 100.3 14.8 175 1-193 205-400 (420)
171 PF08662 eIF2A: Eukaryotic tra 99.5 2.6E-11 5.7E-16 92.5 19.3 159 30-200 10-183 (194)
172 KOG2110|consensus 99.5 3.7E-11 7.9E-16 96.2 20.4 144 51-197 96-250 (391)
173 PRK03629 tolB translocation pr 99.4 6.3E-11 1.4E-15 101.3 22.6 198 6-222 180-387 (429)
174 PRK11028 6-phosphogluconolacto 99.4 5.6E-11 1.2E-15 98.2 21.5 177 2-196 9-206 (330)
175 KOG4328|consensus 99.4 3.1E-12 6.6E-17 104.7 13.4 174 14-200 175-358 (498)
176 PF02239 Cytochrom_D1: Cytochr 99.4 2.6E-10 5.6E-15 95.4 25.2 187 3-204 14-211 (369)
177 KOG1063|consensus 99.4 2.7E-12 5.9E-17 109.6 13.2 183 4-198 33-227 (764)
178 KOG2106|consensus 99.4 2.3E-11 5E-16 100.9 17.9 195 4-221 221-420 (626)
179 KOG0307|consensus 99.4 7.7E-13 1.7E-17 118.3 9.8 184 1-199 135-331 (1049)
180 KOG2111|consensus 99.4 1.9E-11 4.1E-16 96.1 16.3 161 62-224 75-242 (346)
181 KOG0321|consensus 99.4 1.7E-11 3.8E-16 104.0 16.3 195 3-198 72-350 (720)
182 KOG1445|consensus 99.4 3E-12 6.5E-17 108.8 11.5 186 1-200 646-849 (1012)
183 PRK05137 tolB translocation pr 99.4 1.6E-10 3.6E-15 99.0 22.5 199 5-222 182-390 (435)
184 PRK04922 tolB translocation pr 99.4 1.2E-10 2.7E-15 99.7 21.4 196 5-222 184-392 (433)
185 KOG1963|consensus 99.4 1.9E-11 4.1E-16 106.9 15.8 186 3-200 35-286 (792)
186 PRK02889 tolB translocation pr 99.4 2.5E-10 5.4E-15 97.6 22.0 195 5-222 176-384 (427)
187 KOG1523|consensus 99.4 3.7E-11 8.1E-16 94.5 15.1 168 16-198 46-239 (361)
188 KOG0644|consensus 99.4 3.8E-13 8.1E-18 117.0 4.2 183 1-201 208-432 (1113)
189 COG2319 FOG: WD40 repeat [Gene 99.4 5.7E-10 1.2E-14 92.6 22.3 181 2-199 84-275 (466)
190 KOG1007|consensus 99.4 7.1E-11 1.5E-15 91.9 15.3 144 50-196 182-362 (370)
191 KOG1009|consensus 99.3 9.4E-12 2E-16 100.5 10.7 159 1-200 32-200 (434)
192 KOG0771|consensus 99.3 1.7E-11 3.6E-16 99.4 11.9 155 51-205 155-321 (398)
193 PRK01742 tolB translocation pr 99.3 2.4E-10 5.1E-15 97.8 19.3 176 5-205 228-413 (429)
194 KOG1445|consensus 99.3 6.5E-12 1.4E-16 106.7 9.4 171 51-223 590-779 (1012)
195 PRK11028 6-phosphogluconolacto 99.3 3.7E-10 8E-15 93.3 19.6 141 55-195 141-304 (330)
196 KOG1310|consensus 99.3 1.1E-11 2.3E-16 103.9 9.4 124 18-196 43-179 (758)
197 KOG1240|consensus 99.3 1.5E-10 3.2E-15 104.8 16.7 181 10-205 1034-1235(1431)
198 KOG3881|consensus 99.3 2.4E-10 5.2E-15 92.1 16.1 162 51-216 160-339 (412)
199 TIGR02800 propeller_TolB tol-p 99.3 1.5E-09 3.2E-14 92.4 21.7 179 6-200 171-359 (417)
200 KOG0642|consensus 99.3 2.6E-11 5.7E-16 101.5 10.0 149 20-219 289-450 (577)
201 KOG0322|consensus 99.3 7.7E-11 1.7E-15 90.7 11.2 184 19-219 8-304 (323)
202 PRK03629 tolB translocation pr 99.3 4.1E-09 8.8E-14 90.2 22.7 178 5-204 223-414 (429)
203 KOG1273|consensus 99.3 6.1E-10 1.3E-14 87.8 16.0 161 28-204 26-192 (405)
204 KOG1009|consensus 99.2 1.5E-10 3.1E-15 93.7 12.2 124 26-205 14-163 (434)
205 PRK05137 tolB translocation pr 99.2 3.9E-09 8.5E-14 90.5 21.0 178 4-200 225-417 (435)
206 KOG2321|consensus 99.2 4.8E-10 1E-14 94.5 13.9 175 3-194 153-342 (703)
207 PRK00178 tolB translocation pr 99.2 1.1E-08 2.3E-13 87.7 22.4 196 6-223 180-388 (430)
208 KOG2394|consensus 99.2 3.5E-10 7.6E-15 94.6 12.6 147 26-201 220-368 (636)
209 KOG1517|consensus 99.2 1.1E-09 2.3E-14 98.1 15.9 179 5-197 1086-1289(1387)
210 KOG1272|consensus 99.2 5.1E-11 1.1E-15 97.9 6.8 152 50-203 139-331 (545)
211 KOG2139|consensus 99.2 1.8E-09 3.9E-14 86.6 15.3 149 54-205 112-278 (445)
212 PF08662 eIF2A: Eukaryotic tra 99.2 4.6E-09 1E-13 80.2 16.9 125 17-160 50-185 (194)
213 KOG1517|consensus 99.2 2.2E-09 4.8E-14 96.2 16.5 149 53-204 1178-1341(1387)
214 KOG1587|consensus 99.2 2.1E-09 4.7E-14 93.1 16.1 182 1-198 261-475 (555)
215 KOG4190|consensus 99.2 1.1E-10 2.4E-15 98.2 7.8 172 18-205 728-916 (1034)
216 KOG0290|consensus 99.2 2.9E-09 6.4E-14 83.1 15.0 168 2-185 170-356 (364)
217 PRK04922 tolB translocation pr 99.1 1.4E-08 3E-13 87.1 20.8 175 5-198 228-414 (433)
218 KOG1188|consensus 99.1 3.4E-10 7.3E-15 89.9 9.8 178 3-194 141-345 (376)
219 PF00400 WD40: WD domain, G-be 99.1 1.9E-10 4E-15 64.2 5.7 38 156-193 2-39 (39)
220 KOG0644|consensus 99.1 1.9E-11 4.1E-16 106.7 2.2 119 16-195 181-300 (1113)
221 PRK04792 tolB translocation pr 99.1 3.1E-08 6.8E-13 85.2 21.8 195 6-222 199-406 (448)
222 KOG4227|consensus 99.1 3.7E-09 8.1E-14 85.7 14.6 161 21-198 52-228 (609)
223 KOG0974|consensus 99.1 1.2E-09 2.5E-14 97.5 11.8 138 2-198 152-291 (967)
224 PRK01029 tolB translocation pr 99.1 5.8E-08 1.2E-12 83.1 21.0 202 5-222 165-384 (428)
225 KOG2139|consensus 99.1 1.1E-08 2.4E-13 82.1 14.9 182 21-220 192-410 (445)
226 KOG1334|consensus 99.0 1.2E-09 2.7E-14 90.4 8.9 196 1-197 205-468 (559)
227 TIGR02658 TTQ_MADH_Hv methylam 99.0 5.7E-07 1.2E-11 74.3 23.9 199 4-221 26-311 (352)
228 PRK02889 tolB translocation pr 99.0 2.6E-07 5.6E-12 79.1 22.9 178 5-203 220-410 (427)
229 PF00400 WD40: WD domain, G-be 99.0 1.6E-09 3.4E-14 60.3 5.2 39 15-68 1-39 (39)
230 TIGR02800 propeller_TolB tol-p 99.0 2.7E-07 5.8E-12 78.6 21.1 171 5-194 214-396 (417)
231 KOG4497|consensus 99.0 3.2E-09 7E-14 84.3 8.3 175 1-201 67-246 (447)
232 KOG2321|consensus 98.9 1E-07 2.3E-12 80.7 15.7 162 23-200 49-263 (703)
233 KOG1240|consensus 98.9 1E-07 2.3E-12 86.9 16.4 188 1-205 1067-1284(1431)
234 KOG1310|consensus 98.9 4.3E-08 9.3E-13 82.7 13.1 186 1-200 68-308 (758)
235 PRK00178 tolB translocation pr 98.9 1.2E-06 2.7E-11 75.0 22.0 173 6-197 224-408 (430)
236 KOG4227|consensus 98.9 1.3E-07 2.8E-12 76.9 14.8 196 1-213 74-293 (609)
237 KOG1524|consensus 98.9 5.3E-08 1.1E-12 81.9 12.3 142 52-197 75-218 (737)
238 KOG1963|consensus 98.8 8.3E-07 1.8E-11 78.4 19.6 138 55-195 174-322 (792)
239 PRK04792 tolB translocation pr 98.8 2.4E-06 5.2E-11 73.6 22.2 176 6-203 243-432 (448)
240 KOG2315|consensus 98.8 6.1E-07 1.3E-11 75.9 17.3 127 63-196 252-391 (566)
241 KOG1538|consensus 98.8 5.2E-08 1.1E-12 84.0 11.2 164 27-195 14-211 (1081)
242 TIGR02658 TTQ_MADH_Hv methylam 98.8 7.8E-06 1.7E-10 67.6 23.4 199 3-207 75-342 (352)
243 PRK04043 tolB translocation pr 98.8 6.2E-06 1.4E-10 70.4 23.3 191 7-222 171-381 (419)
244 KOG4547|consensus 98.8 7.8E-07 1.7E-11 75.5 17.3 155 52-210 5-187 (541)
245 KOG3881|consensus 98.7 1.7E-06 3.6E-11 70.4 17.2 160 49-208 112-291 (412)
246 KOG4532|consensus 98.7 3.2E-06 6.8E-11 65.9 17.8 151 53-203 129-290 (344)
247 KOG4547|consensus 98.7 2.5E-06 5.4E-11 72.5 18.1 192 2-197 12-222 (541)
248 PRK01029 tolB translocation pr 98.7 7.4E-06 1.6E-10 70.2 21.3 118 83-203 282-411 (428)
249 KOG1272|consensus 98.7 6.5E-08 1.4E-12 80.0 8.2 178 1-197 227-411 (545)
250 KOG1587|consensus 98.7 2.9E-06 6.3E-11 73.9 18.5 175 5-195 222-428 (555)
251 PF02239 Cytochrom_D1: Cytochr 98.7 6.9E-06 1.5E-10 68.9 20.3 144 55-200 9-163 (369)
252 KOG0280|consensus 98.7 3.5E-07 7.7E-12 71.8 11.5 165 19-197 159-335 (339)
253 KOG3914|consensus 98.7 6.7E-07 1.5E-11 72.8 13.4 146 52-200 74-228 (390)
254 PLN02919 haloacid dehalogenase 98.7 1.7E-05 3.7E-10 74.9 24.6 149 51-199 694-892 (1057)
255 KOG2394|consensus 98.7 1.4E-07 3.1E-12 79.3 9.7 117 81-199 290-456 (636)
256 KOG1064|consensus 98.7 1.8E-07 4E-12 88.2 10.4 149 52-207 2220-2378(2439)
257 KOG0882|consensus 98.7 1.4E-07 3E-12 77.9 8.6 188 1-205 26-241 (558)
258 KOG1354|consensus 98.6 4E-07 8.7E-12 73.0 10.8 116 82-200 165-307 (433)
259 COG4946 Uncharacterized protei 98.6 6.2E-05 1.3E-09 63.2 23.5 172 46-223 326-503 (668)
260 KOG0280|consensus 98.6 1.3E-05 2.9E-10 63.1 17.8 146 54-200 87-247 (339)
261 KOG4497|consensus 98.6 1.5E-06 3.2E-11 69.5 12.5 190 30-225 13-236 (447)
262 PF13360 PQQ_2: PQQ-like domai 98.6 3.2E-05 6.8E-10 60.6 20.3 181 3-206 1-200 (238)
263 KOG1334|consensus 98.6 2.7E-07 5.8E-12 76.9 8.2 201 1-201 160-430 (559)
264 KOG1523|consensus 98.5 7.9E-06 1.7E-10 65.0 15.2 154 24-194 9-175 (361)
265 PF10282 Lactonase: Lactonase, 98.5 6.6E-05 1.4E-09 62.6 21.1 140 61-200 165-329 (345)
266 PRK04043 tolB translocation pr 98.5 3.4E-05 7.4E-10 65.9 19.5 174 5-199 213-404 (419)
267 TIGR03300 assembly_YfgL outer 98.5 8E-05 1.7E-09 62.7 21.1 145 53-205 191-348 (377)
268 KOG1064|consensus 98.5 6.8E-07 1.5E-11 84.6 8.7 170 1-199 2226-2402(2439)
269 KOG0974|consensus 98.5 6.5E-06 1.4E-10 74.2 14.5 140 51-194 98-245 (967)
270 KOG1409|consensus 98.5 4.3E-06 9.4E-11 67.1 12.1 169 13-196 185-395 (404)
271 PF10282 Lactonase: Lactonase, 98.4 0.00032 7E-09 58.5 22.5 200 24-224 60-307 (345)
272 PF13360 PQQ_2: PQQ-like domai 98.4 0.00014 3.1E-09 56.9 19.3 145 51-200 75-235 (238)
273 TIGR03300 assembly_YfgL outer 98.4 6.4E-05 1.4E-09 63.3 18.2 148 51-200 104-264 (377)
274 KOG4714|consensus 98.4 6.7E-06 1.5E-10 63.8 10.4 144 51-196 100-255 (319)
275 KOG4190|consensus 98.3 2.8E-06 6E-11 72.3 8.2 181 1-199 753-952 (1034)
276 KOG1409|consensus 98.3 2.3E-05 5.1E-10 63.0 12.9 70 130-199 204-274 (404)
277 COG2706 3-carboxymuconate cycl 98.3 0.001 2.2E-08 54.0 21.4 206 5-225 16-260 (346)
278 COG5170 CDC55 Serine/threonine 98.3 1.1E-05 2.3E-10 64.3 9.8 113 83-198 174-312 (460)
279 PF07433 DUF1513: Protein of u 98.3 0.0012 2.5E-08 53.4 21.4 184 7-202 30-254 (305)
280 KOG2066|consensus 98.2 0.00014 3E-09 64.5 17.2 170 16-197 50-235 (846)
281 PF15492 Nbas_N: Neuroblastoma 98.2 0.0013 2.8E-08 51.9 20.8 41 165-205 229-269 (282)
282 KOG2041|consensus 98.2 2.5E-05 5.4E-10 68.5 11.8 184 1-186 32-279 (1189)
283 KOG1275|consensus 98.2 8.5E-06 1.8E-10 72.9 8.9 142 2-151 194-340 (1118)
284 smart00320 WD40 WD40 repeats. 98.2 5.6E-06 1.2E-10 44.3 5.0 38 156-193 3-40 (40)
285 PLN02919 haloacid dehalogenase 98.2 0.0015 3.3E-08 62.1 24.0 148 52-200 635-838 (1057)
286 PF11768 DUF3312: Protein of u 98.2 7.5E-05 1.6E-09 64.1 13.6 82 115-198 251-332 (545)
287 KOG3914|consensus 98.1 4.8E-05 1E-09 62.2 11.0 103 57-162 127-232 (390)
288 KOG4532|consensus 98.1 0.00033 7.1E-09 54.9 14.7 162 34-198 62-236 (344)
289 COG5354 Uncharacterized protei 98.1 0.00073 1.6E-08 57.2 17.2 187 2-200 199-400 (561)
290 KOG2314|consensus 98.0 0.00027 5.9E-09 60.4 14.3 211 8-225 234-509 (698)
291 KOG2695|consensus 98.0 3.8E-05 8.3E-10 61.9 8.8 146 56-203 228-384 (425)
292 PF08450 SGL: SMP-30/Gluconola 98.0 0.0044 9.6E-08 48.9 20.5 119 63-183 116-244 (246)
293 KOG2695|consensus 98.0 5.4E-05 1.2E-09 61.1 9.1 111 52-162 264-385 (425)
294 COG0823 TolB Periplasmic compo 98.0 0.0018 3.8E-08 55.4 18.2 169 15-199 182-362 (425)
295 COG2706 3-carboxymuconate cycl 97.9 0.008 1.7E-07 49.0 20.1 149 52-200 156-328 (346)
296 KOG2314|consensus 97.9 0.0011 2.4E-08 56.9 15.5 118 77-195 441-573 (698)
297 smart00320 WD40 WD40 repeats. 97.9 4.7E-05 1E-09 40.4 5.2 39 15-68 2-40 (40)
298 COG4946 Uncharacterized protei 97.9 0.0035 7.6E-08 53.0 18.0 125 52-180 371-503 (668)
299 COG5354 Uncharacterized protei 97.9 0.0043 9.2E-08 52.7 18.5 195 4-201 107-354 (561)
300 KOG2315|consensus 97.8 0.005 1.1E-07 52.8 17.4 197 5-220 146-366 (566)
301 PRK02888 nitrous-oxide reducta 97.7 0.0082 1.8E-07 53.1 18.3 135 51-189 287-458 (635)
302 KOG0309|consensus 97.7 9E-05 2E-09 65.3 6.2 62 138-199 173-236 (1081)
303 KOG0309|consensus 97.7 7.4E-05 1.6E-09 65.8 5.4 148 4-196 179-340 (1081)
304 KOG1354|consensus 97.7 0.0043 9.3E-08 50.4 14.8 133 23-155 162-361 (433)
305 PF04762 IKI3: IKI3 family; I 97.7 0.015 3.2E-07 54.7 20.6 132 83-218 211-358 (928)
306 PRK11138 outer membrane biogen 97.6 0.0069 1.5E-07 51.4 16.9 147 51-199 119-278 (394)
307 PF11768 DUF3312: Protein of u 97.6 0.016 3.6E-07 50.2 18.7 77 76-155 254-331 (545)
308 PRK11138 outer membrane biogen 97.6 0.032 7E-07 47.4 20.3 146 53-205 206-363 (394)
309 PF06433 Me-amine-dh_H: Methyl 97.5 0.038 8.2E-07 45.4 18.2 191 4-205 16-225 (342)
310 KOG4714|consensus 97.4 0.00088 1.9E-08 52.3 7.6 57 1-71 198-255 (319)
311 PF04841 Vps16_N: Vps16, N-ter 97.4 0.036 7.8E-07 47.4 18.1 39 165-203 216-254 (410)
312 PF04762 IKI3: IKI3 family; I 97.4 0.017 3.8E-07 54.2 17.4 160 51-222 86-270 (928)
313 KOG1275|consensus 97.4 0.0074 1.6E-07 54.9 14.0 171 21-194 152-341 (1118)
314 PF08450 SGL: SMP-30/Gluconola 97.4 0.045 9.8E-07 43.2 24.5 159 52-216 51-232 (246)
315 KOG1920|consensus 97.3 0.015 3.2E-07 54.4 15.7 199 3-205 88-334 (1265)
316 KOG4640|consensus 97.3 0.0015 3.3E-08 56.8 8.4 72 130-202 27-99 (665)
317 PRK02888 nitrous-oxide reducta 97.3 0.061 1.3E-06 47.8 18.0 166 28-196 176-405 (635)
318 KOG2114|consensus 97.2 0.047 1E-06 49.5 17.2 144 53-199 78-247 (933)
319 KOG3617|consensus 97.2 0.00099 2.2E-08 59.9 6.8 110 83-195 17-131 (1416)
320 PF04053 Coatomer_WDAD: Coatom 97.2 0.034 7.4E-07 47.9 15.6 142 27-197 34-175 (443)
321 KOG1912|consensus 97.1 0.0034 7.4E-08 56.0 9.3 131 27-204 17-152 (1062)
322 KOG1645|consensus 97.1 0.0054 1.2E-07 50.8 9.8 164 8-185 176-351 (463)
323 PF08553 VID27: VID27 cytoplas 97.1 0.022 4.8E-07 52.1 14.4 133 59-194 501-646 (794)
324 KOG0882|consensus 97.1 0.0055 1.2E-07 51.5 9.3 144 52-195 20-174 (558)
325 COG0823 TolB Periplasmic compo 97.1 0.019 4E-07 49.3 12.9 160 6-185 219-389 (425)
326 COG3391 Uncharacterized conser 97.1 0.15 3.4E-06 43.1 21.3 169 53-224 87-268 (381)
327 KOG1920|consensus 97.1 0.051 1.1E-06 51.0 16.1 141 52-194 80-273 (1265)
328 COG3391 Uncharacterized conser 97.0 0.17 3.8E-06 42.8 21.1 136 82-221 74-219 (381)
329 KOG1912|consensus 97.0 0.022 4.9E-07 51.1 12.5 83 6-91 36-119 (1062)
330 cd00216 PQQ_DH Dehydrogenases 96.9 0.24 5.3E-06 43.4 18.9 138 63-205 257-434 (488)
331 PF12894 Apc4_WD40: Anaphase-p 96.9 0.004 8.6E-08 35.8 5.1 33 165-198 11-43 (47)
332 PF00780 CNH: CNH domain; Int 96.8 0.19 4.1E-06 40.2 17.8 146 52-203 7-173 (275)
333 KOG2066|consensus 96.8 0.055 1.2E-06 48.7 13.7 106 1-120 89-197 (846)
334 PF03178 CPSF_A: CPSF A subuni 96.7 0.25 5.4E-06 40.7 19.6 181 5-195 2-202 (321)
335 PF14727 PHTB1_N: PTHB1 N-term 96.7 0.31 6.8E-06 41.7 19.1 144 50-194 35-203 (418)
336 KOG2041|consensus 96.7 0.016 3.4E-07 51.6 9.8 153 25-195 14-186 (1189)
337 PF05096 Glu_cyclase_2: Glutam 96.6 0.27 5.9E-06 39.2 18.4 147 52-203 56-211 (264)
338 KOG1832|consensus 96.6 0.0017 3.7E-08 58.8 2.9 164 2-179 1120-1315(1516)
339 PF04053 Coatomer_WDAD: Coatom 96.5 0.21 4.5E-06 43.2 15.1 134 52-195 117-262 (443)
340 PF05096 Glu_cyclase_2: Glutam 96.4 0.39 8.5E-06 38.3 18.7 122 57-183 105-249 (264)
341 PF10313 DUF2415: Uncharacteri 96.3 0.016 3.5E-07 32.3 4.9 31 166-196 1-34 (43)
342 cd00216 PQQ_DH Dehydrogenases 96.3 0.63 1.4E-05 40.8 17.1 150 52-204 61-273 (488)
343 KOG4649|consensus 96.2 0.37 8.1E-06 38.2 13.7 99 99-200 30-128 (354)
344 KOG1832|consensus 96.2 0.0087 1.9E-07 54.5 5.3 160 15-199 1091-1259(1516)
345 PF14783 BBS2_Mid: Ciliary BBS 96.2 0.22 4.8E-06 34.1 14.1 91 53-147 16-108 (111)
346 KOG3621|consensus 96.1 0.047 1E-06 48.4 9.1 109 88-196 40-155 (726)
347 PF14783 BBS2_Mid: Ciliary BBS 96.1 0.18 3.9E-06 34.5 9.9 55 136-194 16-70 (111)
348 KOG2395|consensus 95.8 0.24 5.3E-06 42.9 11.9 138 54-194 348-499 (644)
349 COG3490 Uncharacterized protei 95.7 0.84 1.8E-05 36.8 16.2 184 8-201 94-316 (366)
350 PF08553 VID27: VID27 cytoplas 95.6 0.2 4.4E-06 46.0 11.2 59 51-109 587-646 (794)
351 PF07433 DUF1513: Protein of u 95.5 1.1 2.3E-05 36.6 18.3 177 4-185 76-276 (305)
352 KOG4649|consensus 95.5 0.96 2.1E-05 36.0 15.4 109 53-162 24-132 (354)
353 PF12657 TFIIIC_delta: Transcr 95.5 0.18 3.9E-06 37.6 9.2 40 166-206 86-131 (173)
354 KOG1645|consensus 95.4 0.096 2.1E-06 43.6 7.7 129 24-156 134-269 (463)
355 KOG2444|consensus 95.3 0.087 1.9E-06 40.7 6.7 140 55-196 33-178 (238)
356 KOG3621|consensus 94.9 0.29 6.3E-06 43.7 9.6 95 2-111 52-155 (726)
357 KOG2395|consensus 94.8 0.29 6.2E-06 42.5 9.2 58 51-109 440-499 (644)
358 PF12234 Rav1p_C: RAVE protein 94.8 1.9 4.1E-05 38.9 14.7 110 83-194 31-155 (631)
359 COG5170 CDC55 Serine/threonine 94.8 0.17 3.6E-06 41.0 7.3 66 129-195 178-252 (460)
360 KOG2280|consensus 94.7 1.2 2.6E-05 40.4 13.0 181 7-205 66-256 (829)
361 KOG2079|consensus 94.6 0.062 1.3E-06 50.0 5.1 69 137-205 101-170 (1206)
362 PF00930 DPPIV_N: Dipeptidyl p 94.6 0.35 7.6E-06 40.5 9.4 101 90-193 1-129 (353)
363 KOG4640|consensus 94.6 0.26 5.7E-06 43.4 8.6 93 81-175 20-115 (665)
364 KOG2114|consensus 94.5 3.9 8.5E-05 37.8 16.4 164 52-219 35-226 (933)
365 PF00780 CNH: CNH domain; Int 94.1 2.4 5.2E-05 33.8 16.5 142 55-205 107-265 (275)
366 PF15390 DUF4613: Domain of un 94.1 2.5 5.5E-05 37.5 13.3 113 82-195 57-186 (671)
367 PF06433 Me-amine-dh_H: Methyl 93.9 3.2 6.8E-05 34.5 21.7 154 51-207 146-332 (342)
368 PF14583 Pectate_lyase22: Olig 93.9 3.4 7.5E-05 34.9 16.1 175 10-195 15-222 (386)
369 PF03178 CPSF_A: CPSF A subuni 93.4 3.8 8.2E-05 33.7 19.1 183 5-208 62-279 (321)
370 COG3386 Gluconolactonase [Carb 93.2 4 8.8E-05 33.5 16.9 165 54-223 39-227 (307)
371 PF12894 Apc4_WD40: Anaphase-p 93.1 0.49 1.1E-05 27.1 5.3 34 120-156 10-43 (47)
372 KOG1897|consensus 92.9 5.1 0.00011 37.7 13.9 156 64-224 752-929 (1096)
373 PHA02713 hypothetical protein; 92.9 2 4.3E-05 38.4 11.5 73 134-212 463-546 (557)
374 PRK13616 lipoprotein LpqB; Pro 92.6 7.7 0.00017 35.0 15.8 110 81-194 396-524 (591)
375 KOG1008|consensus 92.5 0.051 1.1E-06 47.9 0.9 137 53-193 71-223 (783)
376 KOG3617|consensus 92.3 5.7 0.00012 37.0 13.2 29 165-193 303-331 (1416)
377 KOG4499|consensus 92.1 2.6 5.5E-05 33.1 9.5 101 83-185 159-275 (310)
378 PF02897 Peptidase_S9_N: Proly 92.0 7 0.00015 33.3 20.4 190 2-198 147-360 (414)
379 KOG1008|consensus 92.0 0.15 3.3E-06 45.0 3.1 133 60-195 127-275 (783)
380 PF02897 Peptidase_S9_N: Proly 91.9 7.2 0.00016 33.2 19.0 112 30-155 128-262 (414)
381 PF15492 Nbas_N: Neuroblastoma 91.6 0.59 1.3E-05 37.3 5.8 46 24-84 228-273 (282)
382 TIGR03074 PQQ_membr_DH membran 91.1 13 0.00029 34.7 16.9 61 144-205 413-487 (764)
383 KOG2079|consensus 90.7 0.92 2E-05 42.7 6.8 71 121-195 130-203 (1206)
384 TIGR02276 beta_rpt_yvtn 40-res 90.4 1.8 3.8E-05 23.4 5.8 35 55-89 7-41 (42)
385 PF05694 SBP56: 56kDa selenium 90.2 4.5 9.8E-05 34.7 10.0 99 100-198 220-345 (461)
386 PF11715 Nup160: Nucleoporin N 90.2 1.8 4E-05 38.5 8.4 37 166-202 215-255 (547)
387 PF06977 SdiA-regulated: SdiA- 89.9 8.5 0.00018 30.6 20.0 167 20-204 16-209 (248)
388 PRK13616 lipoprotein LpqB; Pro 89.4 16 0.00035 33.0 18.1 167 28-207 399-578 (591)
389 PF04841 Vps16_N: Vps16, N-ter 89.3 13 0.00029 31.9 16.1 53 123-177 218-271 (410)
390 COG5167 VID27 Protein involved 89.1 12 0.00026 33.0 11.7 137 55-194 483-631 (776)
391 PF07569 Hira: TUP1-like enhan 89.1 6.2 0.00013 30.7 9.6 74 132-210 19-106 (219)
392 PF10168 Nup88: Nuclear pore c 88.8 9.1 0.0002 35.4 11.7 35 164-198 145-182 (717)
393 TIGR03074 PQQ_membr_DH membran 88.8 19 0.00042 33.6 13.9 69 136-205 261-354 (764)
394 TIGR03075 PQQ_enz_alc_DH PQQ-d 88.4 18 0.00038 32.3 20.3 152 52-204 120-342 (527)
395 PF10647 Gmad1: Lipoprotein Lp 88.2 11 0.00025 29.9 11.8 107 83-193 25-142 (253)
396 PF14655 RAB3GAP2_N: Rab3 GTPa 87.8 1.1 2.3E-05 38.4 4.9 59 163-221 305-363 (415)
397 PF07569 Hira: TUP1-like enhan 87.4 3.2 6.9E-05 32.3 7.1 58 52-109 22-94 (219)
398 TIGR02276 beta_rpt_yvtn 40-res 87.2 2.3 5E-05 22.9 4.6 31 175-205 1-32 (42)
399 TIGR03118 PEPCTERM_chp_1 conse 87.0 16 0.00034 30.1 17.5 152 53-205 101-289 (336)
400 KOG1898|consensus 87.0 30 0.00064 33.3 15.7 145 7-156 855-1009(1205)
401 COG3823 Glutamine cyclotransfe 86.7 13 0.00028 28.8 11.9 57 59-117 108-165 (262)
402 COG3204 Uncharacterized protei 86.6 16 0.00034 29.8 10.5 116 82-197 86-212 (316)
403 PHA03098 kelch-like protein; P 86.1 22 0.00047 31.5 12.5 67 134-206 437-518 (534)
404 COG3490 Uncharacterized protei 86.1 17 0.00037 29.6 13.6 153 73-227 59-230 (366)
405 COG5167 VID27 Protein involved 85.9 13 0.00029 32.7 10.2 60 51-110 572-632 (776)
406 PF14655 RAB3GAP2_N: Rab3 GTPa 85.8 15 0.00032 31.6 10.7 79 127-205 311-408 (415)
407 PF10647 Gmad1: Lipoprotein Lp 85.7 16 0.00035 29.0 17.1 146 27-188 25-188 (253)
408 PF08801 Nucleoporin_N: Nup133 85.6 6.9 0.00015 33.6 8.8 30 167-196 191-220 (422)
409 PF14870 PSII_BNR: Photosynthe 84.7 21 0.00045 29.4 14.3 131 82-218 145-283 (302)
410 PF15390 DUF4613: Domain of un 84.3 25 0.00054 31.6 11.3 99 54-154 74-187 (671)
411 KOG3616|consensus 84.1 11 0.00025 34.7 9.4 55 26-95 15-69 (1636)
412 PF03088 Str_synth: Strictosid 84.0 2.8 6E-05 27.6 4.4 45 57-101 32-76 (89)
413 PF14781 BBS2_N: Ciliary BBSom 83.1 14 0.00031 26.3 12.6 103 53-156 11-128 (136)
414 PF07676 PD40: WD40-like Beta 82.0 5.9 0.00013 21.0 5.4 28 165-192 8-38 (39)
415 PF03088 Str_synth: Strictosid 81.8 4.9 0.00011 26.4 4.9 43 140-183 32-74 (89)
416 PF01436 NHL: NHL repeat; Int 81.4 4.6 0.0001 20.0 3.7 25 168-192 4-28 (28)
417 COG3823 Glutamine cyclotransfe 81.3 23 0.0005 27.5 12.8 146 51-201 55-210 (262)
418 PF06977 SdiA-regulated: SdiA- 81.3 25 0.00055 27.9 13.6 112 82-196 22-148 (248)
419 PF12234 Rav1p_C: RAVE protein 80.8 33 0.00071 31.3 11.1 48 61-108 50-102 (631)
420 PF10313 DUF2415: Uncharacteri 80.7 7.8 0.00017 21.6 5.7 34 26-71 1-34 (43)
421 PF11715 Nup160: Nucleoporin N 80.2 3 6.5E-05 37.1 4.7 30 51-80 229-258 (547)
422 KOG2247|consensus 79.5 0.18 3.9E-06 43.3 -3.0 133 55-191 49-184 (615)
423 TIGR03075 PQQ_enz_alc_DH PQQ-d 78.3 50 0.0011 29.5 18.3 106 52-161 69-197 (527)
424 COG3386 Gluconolactonase [Carb 77.5 39 0.00084 27.8 22.0 149 51-205 76-252 (307)
425 KOG2377|consensus 77.5 49 0.0011 28.9 13.7 146 81-229 66-224 (657)
426 PF00930 DPPIV_N: Dipeptidyl p 76.8 43 0.00093 28.0 19.5 162 7-182 160-344 (353)
427 PF07995 GSDH: Glucose / Sorbo 76.8 42 0.00091 27.8 12.6 104 83-188 3-136 (331)
428 KOG1900|consensus 76.4 45 0.00098 32.8 11.0 164 2-196 96-273 (1311)
429 PF08728 CRT10: CRT10; InterP 75.2 54 0.0012 30.4 10.9 31 164-194 209-245 (717)
430 smart00564 PQQ beta-propeller 75.1 8.6 0.00019 19.3 3.8 22 179-200 8-29 (33)
431 PF14583 Pectate_lyase22: Olig 75.1 26 0.00056 29.8 8.3 69 132-200 44-115 (386)
432 KOG2444|consensus 74.4 16 0.00034 28.6 6.4 66 135-200 70-137 (238)
433 PF01011 PQQ: PQQ enzyme repea 74.1 11 0.00024 20.0 4.2 26 180-205 3-28 (38)
434 PF08728 CRT10: CRT10; InterP 73.6 78 0.0017 29.4 12.1 73 124-196 103-196 (717)
435 PHA02713 hypothetical protein; 73.2 70 0.0015 28.7 13.5 49 146-196 433-489 (557)
436 KOG4441|consensus 71.9 77 0.0017 28.6 12.5 144 51-197 332-501 (571)
437 PF14269 Arylsulfotran_2: Aryl 70.9 57 0.0012 26.7 13.3 67 128-194 148-219 (299)
438 COG4590 ABC-type uncharacteriz 70.7 26 0.00056 30.5 7.4 68 132-201 325-392 (733)
439 KOG1916|consensus 69.3 3.9 8.5E-05 38.2 2.5 69 138-207 198-282 (1283)
440 PF03022 MRJP: Major royal jel 68.6 63 0.0014 26.3 14.5 55 130-184 192-254 (287)
441 PF08596 Lgl_C: Lethal giant l 68.3 77 0.0017 27.2 18.7 184 22-221 83-319 (395)
442 PF12768 Rax2: Cortical protei 68.1 26 0.00056 28.5 6.8 61 144-208 15-81 (281)
443 PHA03098 kelch-like protein; P 67.3 91 0.002 27.6 12.3 62 134-197 389-466 (534)
444 PRK10115 protease 2; Provision 65.3 1.2E+02 0.0025 28.2 17.6 49 63-112 154-209 (686)
445 TIGR02604 Piru_Ver_Nterm putat 64.7 85 0.0018 26.4 15.6 101 82-186 72-204 (367)
446 PF07995 GSDH: Glucose / Sorbo 60.8 43 0.00093 27.8 7.0 56 134-189 270-329 (331)
447 KOG4499|consensus 60.7 84 0.0018 25.0 12.3 85 45-129 163-261 (310)
448 PF14761 HPS3_N: Hermansky-Pud 58.4 86 0.0019 24.4 7.6 30 166-197 135-165 (215)
449 KOG4460|consensus 58.4 1.4E+02 0.003 26.8 12.6 33 167-199 167-202 (741)
450 PF03022 MRJP: Major royal jel 57.8 1E+02 0.0022 25.1 14.7 57 167-223 187-250 (287)
451 PF08596 Lgl_C: Lethal giant l 56.6 37 0.00079 29.1 6.0 40 161-201 82-121 (395)
452 KOG3630|consensus 56.4 1.1E+02 0.0024 30.1 9.2 128 55-184 117-262 (1405)
453 COG1520 FOG: WD40-like repeat 56.3 1.2E+02 0.0026 25.4 18.7 149 52-202 111-275 (370)
454 PHA02790 Kelch-like protein; P 56.1 1.4E+02 0.0031 26.2 13.6 59 134-197 407-472 (480)
455 KOG2377|consensus 56.0 1E+02 0.0022 27.1 8.3 32 164-195 65-96 (657)
456 PF14727 PHTB1_N: PTHB1 N-term 55.1 1.4E+02 0.0031 25.9 16.6 61 137-200 302-365 (418)
457 PF14761 HPS3_N: Hermansky-Pud 54.0 1E+02 0.0022 23.9 7.9 44 142-186 35-80 (215)
458 PF10584 Proteasome_A_N: Prote 53.2 1.8 3.9E-05 20.6 -1.3 18 213-230 5-22 (23)
459 PF12341 DUF3639: Protein of u 52.0 30 0.00065 17.2 3.5 25 167-193 3-27 (27)
460 TIGR02608 delta_60_rpt delta-6 51.2 27 0.00059 20.6 3.1 19 167-185 2-20 (55)
461 KOG3616|consensus 50.8 21 0.00046 33.1 3.8 44 166-209 15-58 (1636)
462 PHA02790 Kelch-like protein; P 50.8 1.7E+02 0.0038 25.6 13.6 65 134-207 362-431 (480)
463 PRK13684 Ycf48-like protein; P 49.9 1.5E+02 0.0032 24.6 18.8 110 82-194 215-330 (334)
464 COG4257 Vgb Streptogramin lyas 48.8 1.5E+02 0.0032 24.3 16.2 120 82-203 148-269 (353)
465 PF05694 SBP56: 56kDa selenium 47.2 2E+02 0.0043 25.2 14.7 146 53-198 88-281 (461)
466 KOG4441|consensus 45.6 2.3E+02 0.0051 25.6 14.9 148 51-208 380-555 (571)
467 PF14870 PSII_BNR: Photosynthe 44.7 1.8E+02 0.0038 24.0 17.8 134 52-189 156-298 (302)
468 PF01731 Arylesterase: Arylest 44.1 89 0.0019 20.3 5.1 30 166-195 54-84 (86)
469 PF09826 Beta_propel: Beta pro 43.8 2.4E+02 0.0052 25.3 16.0 78 145-225 304-386 (521)
470 TIGR03548 mutarot_permut cycli 42.8 1.9E+02 0.004 23.7 14.0 53 134-186 171-233 (323)
471 PF05935 Arylsulfotrans: Aryls 42.4 2.3E+02 0.0049 25.0 8.9 70 132-205 156-241 (477)
472 PF13570 PQQ_3: PQQ-like domai 42.3 48 0.001 17.6 3.1 20 51-70 20-39 (40)
473 PRK13684 Ycf48-like protein; P 41.5 2.1E+02 0.0045 23.8 12.9 113 82-200 173-292 (334)
474 KOG4659|consensus 41.4 4E+02 0.0087 27.1 10.5 48 169-216 596-644 (1899)
475 KOG1916|consensus 41.1 72 0.0016 30.5 5.5 82 131-218 243-340 (1283)
476 PLN00033 photosystem II stabil 40.9 2.4E+02 0.0051 24.3 16.7 107 81-190 280-394 (398)
477 TIGR03054 photo_alph_chp1 puta 40.1 1.4E+02 0.003 21.4 6.8 66 138-203 44-121 (135)
478 TIGR03606 non_repeat_PQQ dehyd 39.7 1.5E+02 0.0033 26.0 7.2 55 135-190 369-430 (454)
479 cd01272 FE65_N Fe65 Phosphotyr 39.7 36 0.00079 24.1 2.8 29 3-31 60-88 (138)
480 KOG1520|consensus 39.0 58 0.0013 27.6 4.4 83 140-223 194-279 (376)
481 KOG2727|consensus 38.2 22 0.00048 33.6 2.0 49 170-218 326-374 (1244)
482 PF14781 BBS2_N: Ciliary BBSom 36.8 1.6E+02 0.0034 21.1 9.9 62 26-89 39-100 (136)
483 PF14779 BBS1: Ciliary BBSome 35.9 2.2E+02 0.0048 22.9 7.0 56 135-191 195-254 (257)
484 KOG1520|consensus 35.9 87 0.0019 26.6 4.9 72 30-101 165-238 (376)
485 PF12768 Rax2: Cortical protei 35.8 2.4E+02 0.0052 22.9 12.6 102 5-115 16-128 (281)
486 COG3204 Uncharacterized protei 34.0 2.7E+02 0.0058 23.0 15.8 158 23-195 83-263 (316)
487 PF14269 Arylsulfotran_2: Aryl 33.6 1.1E+02 0.0024 25.0 5.3 38 168-205 146-183 (299)
488 PLN00033 photosystem II stabil 33.6 3.1E+02 0.0067 23.6 17.2 113 85-202 242-362 (398)
489 PF05935 Arylsulfotrans: Aryls 33.6 3.3E+02 0.0073 23.9 16.4 36 168-203 273-309 (477)
490 TIGR02604 Piru_Ver_Nterm putat 32.4 3E+02 0.0066 23.1 14.0 19 166-184 124-142 (367)
491 KOG2109|consensus 32.1 44 0.00095 30.5 2.8 45 149-193 299-344 (788)
492 TIGR03118 PEPCTERM_chp_1 conse 29.6 2.3E+02 0.005 23.6 6.2 64 5-78 222-287 (336)
493 KOG1897|consensus 29.4 5.5E+02 0.012 25.1 17.4 87 102-192 470-563 (1096)
494 PF06739 SBBP: Beta-propeller 27.6 1.1E+02 0.0023 16.3 3.3 22 166-187 13-34 (38)
495 TIGR02171 Fb_sc_TIGR02171 Fibr 27.0 5.9E+02 0.013 24.7 10.0 74 103-178 330-411 (912)
496 PF10168 Nup88: Nuclear pore c 26.8 5.4E+02 0.012 24.2 15.6 38 23-72 144-181 (717)
497 COG4257 Vgb Streptogramin lyas 26.1 3.7E+02 0.0081 22.1 14.9 117 81-198 188-308 (353)
498 COG5290 IkappaB kinase complex 24.7 2.2E+02 0.0049 27.0 5.8 62 52-113 258-327 (1243)
499 KOG2280|consensus 24.3 1.2E+02 0.0026 28.3 4.1 50 144-195 63-112 (829)
500 PF09826 Beta_propel: Beta pro 23.1 5.5E+02 0.012 23.0 9.2 18 92-109 21-38 (521)
No 1
>KOG0278|consensus
Probab=100.00 E-value=6.3e-38 Score=236.10 Aligned_cols=207 Identities=63% Similarity=1.114 Sum_probs=193.0
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEecccccccc------------------------------
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK------------------------------ 50 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~------------------------------ 50 (231)
+|.||+.+|..++||++|.+|.||.|.||+..++.+..+.++++.||+..
T Consensus 35 a~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~hkhivk~~af~~ds~~ 114 (334)
T KOG0278|consen 35 ASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFEHKHIVKAVAFSQDSNY 114 (334)
T ss_pred eccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhhhhheeeeEEecccchh
Confidence 47899999999999999999999999999999999999999988876432
Q ss_pred ---------------------------------------CCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEcc
Q psy6442 51 ---------------------------------------NNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISR 91 (231)
Q Consensus 51 ---------------------------------------~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~ 91 (231)
.+++++|++.|++||+||.++++.++++.++.+++++.+++
T Consensus 115 lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~ 194 (334)
T KOG0278|consen 115 LLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQ 194 (334)
T ss_pred hhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEecCCCCcceeecc
Confidence 56788998999999999999999999999999999999999
Q ss_pred CCCEEEEEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeec-cCCCCCeeE
Q psy6442 92 DGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESF-KGHFGPIHC 170 (231)
Q Consensus 92 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~-~~h~~~V~~ 170 (231)
+|..+.+++++.|.+||..+...++..+.|..+.+.++ +|+...+++|++|..++.||..+++.+..+ ++|.+||.|
T Consensus 195 dG~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~SASL--~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhc 272 (334)
T KOG0278|consen 195 DGRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVESASL--HPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHC 272 (334)
T ss_pred CCCEEEEecCceeEEeccccccceeeccCccccccccc--cCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEE
Confidence 99999999999999999999999999999988887776 788889999999999999999999999887 899999999
Q ss_pred EEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCc
Q psy6442 171 VKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGG 209 (231)
Q Consensus 171 v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~ 209 (231)
|.|+|||...||||+||+||||...-++.+.+|.+..++
T Consensus 273 VrFSPdGE~yAsGSEDGTirlWQt~~~~~~~~~~~~~~e 311 (334)
T KOG0278|consen 273 VRFSPDGELYASGSEDGTIRLWQTTPGKTYGLWKCVKPE 311 (334)
T ss_pred EEECCCCceeeccCCCceEEEEEecCCCchhhccccChh
Confidence 999999999999999999999999999999999876655
No 2
>KOG0271|consensus
Probab=100.00 E-value=4.3e-33 Score=220.67 Aligned_cols=205 Identities=27% Similarity=0.353 Sum_probs=171.1
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEecccccccc------------------------------
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK------------------------------ 50 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~------------------------------ 50 (231)
|+-|-+|||||.+|...+.+.+||...|.+++|+|||+.+++|+.|..+.
T Consensus 133 GsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~h 212 (480)
T KOG0271|consen 133 GSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLH 212 (480)
T ss_pred cCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccc
Confidence 57899999999999999999999999999999999999999998875442
Q ss_pred ---CCCEEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccc-eeE
Q psy6442 51 ---NNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPA-QVH 125 (231)
Q Consensus 51 ---~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~ 125 (231)
...+|+|+|.||+|+|||+..+.++..+. +...++++.|-.++.....+.|++|++|+..++...++.+.+. -++
T Consensus 213 l~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN 292 (480)
T KOG0271|consen 213 LVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVN 292 (480)
T ss_pred cCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceEEecCCCceEEEEEccchhHHHhhcccchhee
Confidence 45689999999999999999999988775 5678999999988876666789999999988876665554432 233
Q ss_pred EEEEE---------ecC-------------------------CCCEEEEecCCCeEEEEeCCC-cceeeeccCCCCCeeE
Q psy6442 126 SASLL---------LNS-------------------------ERPIFVCGGEDLKMYKFDYST-GAEIESFKGHFGPIHC 170 (231)
Q Consensus 126 ~~~~~---------~~~-------------------------~~~~~~~g~~d~~i~~~d~~~-~~~~~~~~~h~~~V~~ 170 (231)
.+.+. +++ .+..+++|++|.++.+|+... .+++..+.||...|+.
T Consensus 293 ~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~ 372 (480)
T KOG0271|consen 293 HLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNH 372 (480)
T ss_pred eeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheee
Confidence 22221 011 233599999999999998754 4578889999999999
Q ss_pred EEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeec
Q psy6442 171 VKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKC 205 (231)
Q Consensus 171 v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~ 205 (231)
+.||||++++||+|-|++||+|+.++||....+++
T Consensus 373 V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRG 407 (480)
T KOG0271|consen 373 VSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRG 407 (480)
T ss_pred EEECCCccEEEEeecccceeeeeCCCcchhhhhhh
Confidence 99999999999999999999999999999877763
No 3
>KOG0272|consensus
Probab=99.97 E-value=3.4e-31 Score=211.98 Aligned_cols=207 Identities=20% Similarity=0.209 Sum_probs=179.9
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCC--CceeEecccccccc---------------------------C
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKD--ASKAASGAADFQAK---------------------------N 51 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~--~~~~~s~~~d~~~~---------------------------~ 51 (231)
||-+|.+.||+..++..+++|.||++.|.++.|+|. +..++|++.|..+. +
T Consensus 193 ~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPs 272 (459)
T KOG0272|consen 193 GSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPS 272 (459)
T ss_pred eecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCC
Confidence 467899999999999999999999999999999998 46889998886543 7
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCCEEEEEc-CCeEEEEECCCcceEEeeeccc-eeEEEE
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVTH-GSCVTFLDANSLELIKEHKVPA-QVHSAS 128 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~-~~~i~~~d~~~~~~~~~~~~~~-~~~~~~ 128 (231)
|++|+|++.|.|-++||++++..+...+ +...+.+++|.|||..++.+. |..-++||++++.++-....+. ++..
T Consensus 273 G~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~-- 350 (459)
T KOG0272|consen 273 GKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILS-- 350 (459)
T ss_pred CceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceee--
Confidence 8999999999999999999987654433 557899999999999887654 5677999999999877666543 4544
Q ss_pred EEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcC-CCCEEEEeeCCCcEEEEeCCCCCeeeeeeccC
Q psy6442 129 LLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSP-DGELYASGSEDGTLRLWQTNVGKTYGLWKCIE 207 (231)
Q Consensus 129 ~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~sp-d~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~ 207 (231)
+.++|+|..+|+|+.|.++++||++...+++++.+|...|+.|.|+| .|.+|+||+.|++++||...+.++.+++.+++
T Consensus 351 V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe 430 (459)
T KOG0272|consen 351 VAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHE 430 (459)
T ss_pred EeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCc
Confidence 44599999999999999999999999999999999999999999999 68899999999999999999999888887766
Q ss_pred Cc
Q psy6442 208 GG 209 (231)
Q Consensus 208 ~~ 209 (231)
++
T Consensus 431 ~k 432 (459)
T KOG0272|consen 431 GK 432 (459)
T ss_pred cc
Confidence 65
No 4
>KOG0272|consensus
Probab=99.97 E-value=6.9e-31 Score=210.17 Aligned_cols=191 Identities=19% Similarity=0.222 Sum_probs=169.4
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEecccccccc---------------------------CCC
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK---------------------------NNT 53 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~---------------------------~~~ 53 (231)
|+.||+|++|+.++.+.|..|.||...|-.++|+|+|+.|+|++.|.+.+ +|.
T Consensus 237 ~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGS 316 (459)
T KOG0272|consen 237 ASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGS 316 (459)
T ss_pred eccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCc
Confidence 57899999999998899999999999999999999999999999885543 788
Q ss_pred EEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeeccc-eeEEEEEE
Q psy6442 54 RLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVPA-QVHSASLL 130 (231)
Q Consensus 54 ~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~ 130 (231)
.++|||.|..-||||+++++++..+. +-.+|.+|+|+|+|..++.+ .|+++++||++....+..+..+. -+..+.+
T Consensus 317 L~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~- 395 (459)
T KOG0272|consen 317 LAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKY- 395 (459)
T ss_pred eeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEe-
Confidence 99999999999999999999988876 45789999999999998875 57899999998877766655443 2333344
Q ss_pred ecC-CCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEe
Q psy6442 131 LNS-ERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQ 193 (231)
Q Consensus 131 ~~~-~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd 193 (231)
.| .+.++++++.|.++++|...+.++++++.||.+.|.+++++||++.++|++.|+++|+|.
T Consensus 396 -~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 396 -SPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred -cccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 44 788999999999999999999999999999999999999999999999999999999996
No 5
>KOG0315|consensus
Probab=99.97 E-value=1.6e-29 Score=190.60 Aligned_cols=220 Identities=19% Similarity=0.253 Sum_probs=182.1
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccc---------c--c-----------------cCC
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADF---------Q--A-----------------KNN 52 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~---------~--~-----------------~~~ 52 (231)
+|.|.++|+|.+.+|++.++.+--.+-|..+.+.|+++.|+.++..- . + .++
T Consensus 16 A~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dg 95 (311)
T KOG0315|consen 16 AGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDG 95 (311)
T ss_pred ccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccCCceEEEEEeecC
Confidence 47899999999999999999874455799999999999998875420 0 0 178
Q ss_pred CEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEc-CCeEEEEECCCcceEEeeec--cceeEEEEE
Q psy6442 53 TRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH-GSCVTFLDANSLELIKEHKV--PAQVHSASL 129 (231)
Q Consensus 53 ~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~ 129 (231)
..++|+|.||++||||++...+.+.+++..+++++.++|++..++.+. ++.|++||+....+...... ...+..+.
T Consensus 96 rWMyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~- 174 (311)
T KOG0315|consen 96 RWMYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLT- 174 (311)
T ss_pred eEEEecCCCceEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEE-
Confidence 889999999999999999998888899999999999999998877764 68999999987665544322 23444444
Q ss_pred EecCCCCEEEEecCCCeEEEEeCCCc------ceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCC-Ce---
Q psy6442 130 LLNSERPIFVCGGEDLKMYKFDYSTG------AEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVG-KT--- 199 (231)
Q Consensus 130 ~~~~~~~~~~~g~~d~~i~~~d~~~~------~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~-~~--- 199 (231)
..+++.+++.+...|+.++|++... ++++.|+.|.+-+..+.+|||+.+||++|.|.+++||++.+. |.
T Consensus 175 -v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~ 253 (311)
T KOG0315|consen 175 -VMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELV 253 (311)
T ss_pred -EcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEE
Confidence 4899999999999999999998653 346678899999999999999999999999999999998776 21
Q ss_pred -----eeeeeccCCcccCCCCCCccccc
Q psy6442 200 -----YGLWKCIEGGLNNSLGLDSSGHL 222 (231)
Q Consensus 200 -----~~~~~~~~~~~~~~~~~~~~~~~ 222 (231)
-..|.++|...+.+|.-.+++|.
T Consensus 254 l~gh~rWvWdc~FS~dg~YlvTassd~~ 281 (311)
T KOG0315|consen 254 LTGHQRWVWDCAFSADGEYLVTASSDHT 281 (311)
T ss_pred eecCCceEEeeeeccCccEEEecCCCCc
Confidence 14789999999999988777754
No 6
>KOG0263|consensus
Probab=99.97 E-value=1.5e-29 Score=215.71 Aligned_cols=201 Identities=25% Similarity=0.415 Sum_probs=168.0
Q ss_pred cCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-eC
Q psy6442 3 VDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FG 81 (231)
Q Consensus 3 ~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~ 81 (231)
.|-.++..|...+....+|-||+|+|+.+.|+|+ ...|+|||.|+++|+|.+.+..++-... +.
T Consensus 429 ad~~~~~~D~~~~~~~~~L~GH~GPVyg~sFsPd---------------~rfLlScSED~svRLWsl~t~s~~V~y~GH~ 493 (707)
T KOG0263|consen 429 ADVDVDMLDDDSSGTSRTLYGHSGPVYGCSFSPD---------------RRFLLSCSEDSSVRLWSLDTWSCLVIYKGHL 493 (707)
T ss_pred cchhhhhccccCCceeEEeecCCCceeeeeeccc---------------ccceeeccCCcceeeeecccceeEEEecCCC
Confidence 3444555565556667779999999999999997 5568999999999999999988875554 44
Q ss_pred CcceeEEEccCCCEEEE-EcCCeEEEEECCCcceEEeeeccc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceee
Q psy6442 82 AVPNSLEISRDGTTITV-THGSCVTFLDANSLELIKEHKVPA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIE 159 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~ 159 (231)
.++..|.|+|-|.+++. ++|.+-++|......+++.+-.+. .+.++.+ +|+..++++|+.|.++++||..+|..++
T Consensus 494 ~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~F--HPNs~Y~aTGSsD~tVRlWDv~~G~~VR 571 (707)
T KOG0263|consen 494 APVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSF--HPNSNYVATGSSDRTVRLWDVSTGNSVR 571 (707)
T ss_pred cceeeEEecCCceEEEecCCCceeeeeecccCCchhhhcccccccceEEE--CCcccccccCCCCceEEEEEcCCCcEEE
Confidence 67899999999998765 567788999988888777766553 5655555 9999999999999999999999999999
Q ss_pred eccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCcccc
Q psy6442 160 SFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGH 221 (231)
Q Consensus 160 ~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (231)
.|.||+++|.+|+|||+|++||||++|+.|+|||+.+++.+.+..+. -+..++++|..+|.
T Consensus 572 iF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~H-t~ti~SlsFS~dg~ 632 (707)
T KOG0263|consen 572 IFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGH-TGTIYSLSFSRDGN 632 (707)
T ss_pred EecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcc-cCceeEEEEecCCC
Confidence 99999999999999999999999999999999999999988777665 55566666666544
No 7
>KOG0273|consensus
Probab=99.97 E-value=1.1e-28 Score=199.94 Aligned_cols=218 Identities=20% Similarity=0.332 Sum_probs=176.0
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEecccccc--------------------------ccCCCE
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ--------------------------AKNNTR 54 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~--------------------------~~~~~~ 54 (231)
|+.||.+|+|+ .+|.++.+|..|+++|+++.|+..|+++++++.|.. .+++..
T Consensus 253 G~~~G~~riw~-~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~ 331 (524)
T KOG0273|consen 253 GSEDGEARIWN-KDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDE 331 (524)
T ss_pred eecCcEEEEEe-cCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCce
Confidence 46799999999 679999999999999999999999999999977642 237788
Q ss_pred EEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCCEEEE-EcCCeEEEEECCCcceEEeeecc-ceeEEEEEEe
Q psy6442 55 LISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITV-THGSCVTFLDANSLELIKEHKVP-AQVHSASLLL 131 (231)
Q Consensus 55 l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~ 131 (231)
+++++.|+.|+++.+....++.++. +...+..+.|.|.+..++. +.|+++++|..........+..+ ..+..+.+.+
T Consensus 332 F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp 411 (524)
T KOG0273|consen 332 FATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSP 411 (524)
T ss_pred EeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecC
Confidence 9999999999999998888877765 5678999999999998765 56789999986554433322221 1222222211
Q ss_pred -------cCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeee
Q psy6442 132 -------NSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWK 204 (231)
Q Consensus 132 -------~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~ 204 (231)
...+..+++++.|.++++||..++.+++.|..|..||.+|+|||+|+++|+|+.||.|.||++++++.++..+
T Consensus 412 ~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~ 491 (524)
T KOG0273|consen 412 TGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQ 491 (524)
T ss_pred CCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeec
Confidence 1245578999999999999999999999999999999999999999999999999999999999999887666
Q ss_pred ccCCcccCCCCCCcccc
Q psy6442 205 CIEGGLNNSLGLDSSGH 221 (231)
Q Consensus 205 ~~~~~~~~~~~~~~~~~ 221 (231)
+ +...+.+.|...|-
T Consensus 492 ~--~~~Ifel~Wn~~G~ 506 (524)
T KOG0273|consen 492 G--TGGIFELCWNAAGD 506 (524)
T ss_pred C--CCeEEEEEEcCCCC
Confidence 4 44455566655553
No 8
>KOG0295|consensus
Probab=99.97 E-value=1.1e-28 Score=194.48 Aligned_cols=210 Identities=20% Similarity=0.353 Sum_probs=175.2
Q ss_pred CcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccc----------------------------cCCC
Q psy6442 2 CVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQA----------------------------KNNT 53 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~----------------------------~~~~ 53 (231)
+.|+++++||..+|++.+.|+||++.|..+.|+..|+++++.+.|..+ ..+.
T Consensus 127 s~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd 206 (406)
T KOG0295|consen 127 SEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGD 206 (406)
T ss_pred cCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecCC
Confidence 579999999999999999999999999999999999999999877532 2678
Q ss_pred EEEEEeCCCCEEEEeCCCCCceEEEEe-CCcceeEEEccCCCEEEE-EcCCeEEEEECCCcce---EEeeeccceeEEEE
Q psy6442 54 RLISCAEDKTVRLWDVSASAEVQKLEF-GAVPNSLEISRDGTTITV-THGSCVTFLDANSLEL---IKEHKVPAQVHSAS 128 (231)
Q Consensus 54 ~l~s~s~D~ti~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~~---~~~~~~~~~~~~~~ 128 (231)
.|+||+.|.+||.|++.++.|+.++.- ...+..++...||..++. +.+.++++|-..++++ ++.++.+.++. .
T Consensus 207 ~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci--~ 284 (406)
T KOG0295|consen 207 HILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECI--A 284 (406)
T ss_pred eeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEE--E
Confidence 999999999999999999999988864 456888999999987765 4567999999988844 44444443332 2
Q ss_pred EEe-------------cCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCC
Q psy6442 129 LLL-------------NSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 129 ~~~-------------~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~ 195 (231)
+.+ ...++.+.+++.|++|++||+.++.++-++.||..-|+.++|+|.|++|+|+++|+++++||++
T Consensus 285 wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~ 364 (406)
T KOG0295|consen 285 WAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLK 364 (406)
T ss_pred ecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEec
Confidence 211 0124689999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeeeeeccCCcccCCC
Q psy6442 196 VGKTYGLWKCIEGGLNNSL 214 (231)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~ 214 (231)
+++-+..|.. -++..+++
T Consensus 365 ~~~cmk~~~a-h~hfvt~l 382 (406)
T KOG0295|consen 365 NLQCMKTLEA-HEHFVTSL 382 (406)
T ss_pred cceeeeccCC-CcceeEEE
Confidence 9998888873 34433333
No 9
>KOG0263|consensus
Probab=99.96 E-value=9.9e-29 Score=210.65 Aligned_cols=180 Identities=21% Similarity=0.355 Sum_probs=161.4
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE- 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~- 79 (231)
+|.|++||||+..|-.++..++||..+||.++|+|-|- ++||||.|+|.++|......+++.+.
T Consensus 469 cSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~Gy---------------YFatas~D~tArLWs~d~~~PlRifag 533 (707)
T KOG0263|consen 469 CSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGY---------------YFATASHDQTARLWSTDHNKPLRIFAG 533 (707)
T ss_pred ccCCcceeeeecccceeEEEecCCCcceeeEEecCCce---------------EEEecCCCceeeeeecccCCchhhhcc
Confidence 58899999999999999999999999999999999754 57899999999999998877776654
Q ss_pred eCCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeeccc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcce
Q psy6442 80 FGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVPA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAE 157 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~ 157 (231)
+-..+.++.|+|+..+++.+ .+.++++||..++..++.+..+. ++.++.+ +|.|+.+++|++|+.|.+||+..+.+
T Consensus 534 hlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~--Sp~Gr~LaSg~ed~~I~iWDl~~~~~ 611 (707)
T KOG0263|consen 534 HLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAF--SPCGRYLASGDEDGLIKIWDLANGSL 611 (707)
T ss_pred cccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEE--cCCCceEeecccCCcEEEEEcCCCcc
Confidence 45678999999999998875 46799999999999999987653 6665555 88999999999999999999999999
Q ss_pred eeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCC
Q psy6442 158 IESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 158 ~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~ 197 (231)
+..+.+|++.|.++.||.||..||+++.|.+|++||+..-
T Consensus 612 v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 612 VKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKV 651 (707)
T ss_pred hhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhh
Confidence 9999999999999999999999999999999999998644
No 10
>KOG0279|consensus
Probab=99.96 E-value=7.5e-28 Score=184.01 Aligned_cols=202 Identities=24% Similarity=0.316 Sum_probs=167.2
Q ss_pred CCcCCCceeeec-----cCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCce
Q psy6442 1 MCVDGKPMLRQG-----DTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEV 75 (231)
Q Consensus 1 ~~~d~~~~~~~~-----~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~ 75 (231)
++.|.++.+|++ +.|...+.|+||+..|..+..+++|+ +.+|+|+|+++|+||+.+++..
T Consensus 34 asrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~---------------~alS~swD~~lrlWDl~~g~~t 98 (315)
T KOG0279|consen 34 ASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGN---------------FALSASWDGTLRLWDLATGEST 98 (315)
T ss_pred cccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCc---------------eEEeccccceEEEEEecCCcEE
Confidence 367888999987 45677899999999999999999855 4789999999999999998777
Q ss_pred EEEE-eCCcceeEEEccCCCEEEE-EcCCeEEEEECCCcceEEeeec--cceeEEEEEEecCCCCEEEEecCCCeEEEEe
Q psy6442 76 QKLE-FGAVPNSLEISRDGTTITV-THGSCVTFLDANSLELIKEHKV--PAQVHSASLLLNSERPIFVCGGEDLKMYKFD 151 (231)
Q Consensus 76 ~~~~-~~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d 151 (231)
+.+. +...+.+++++||.+.++. +.+.+|.+|+.-........+. ..-+.+..+.++.....++++++|+++++||
T Consensus 99 ~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWn 178 (315)
T KOG0279|consen 99 RRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWN 178 (315)
T ss_pred EEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEc
Confidence 6665 5678999999999988765 4588999999876555544443 2346666675555588999999999999999
Q ss_pred CCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCcc
Q psy6442 152 YSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSS 219 (231)
Q Consensus 152 ~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (231)
+++-+..+.+.||.+.++.+++||||.+.+||+.||.+.+||++.++-...++. ....++++|.++
T Consensus 179 l~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a--~~~v~sl~fspn 244 (315)
T KOG0279|consen 179 LRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEA--FDIVNSLCFSPN 244 (315)
T ss_pred cCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccC--CCeEeeEEecCC
Confidence 999888899999999999999999999999999999999999999998766663 444566666654
No 11
>KOG0271|consensus
Probab=99.96 E-value=9.1e-28 Score=190.57 Aligned_cols=190 Identities=26% Similarity=0.414 Sum_probs=162.9
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEecccccccc------------------------------
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK------------------------------ 50 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~------------------------------ 50 (231)
+|.||+||+|+...|+++.++.||+.+|.|+.|-.+ .++.+++-|.+++
T Consensus 223 ~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~-gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~ 301 (480)
T KOG0271|consen 223 SSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGE-GLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYV 301 (480)
T ss_pred ccCCCCEEEEEccCceEEEEeccCccceEEEEEcCC-ceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhh
Confidence 478999999999999999999999999999999754 4677887764432
Q ss_pred ---------------------------------CCCEEEEEeCCCCEEEEeCCCC-CceEEE-EeCCcceeEEEccCCCE
Q psy6442 51 ---------------------------------NNTRLISCAEDKTVRLWDVSAS-AEVQKL-EFGAVPNSLEISRDGTT 95 (231)
Q Consensus 51 ---------------------------------~~~~l~s~s~D~ti~iwd~~~~-~~~~~~-~~~~~~~~v~~~~~~~~ 95 (231)
++.+|+|||.|.++.+|+.... +++..+ .+...++.+.|+||+++
T Consensus 302 LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~ 381 (480)
T KOG0271|consen 302 LRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRY 381 (480)
T ss_pred hhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccE
Confidence 4457999999999999987543 344333 46678999999999998
Q ss_pred EEE-EcCCeEEEEECCCcceEEeeeccc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEE
Q psy6442 96 ITV-THGSCVTFLDANSLELIKEHKVPA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKF 173 (231)
Q Consensus 96 ~~~-~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~ 173 (231)
++. +.|..+++|+.++++.+..++.+. .+..+.+ +.+.+++++|+.|.++++|++++.++...+.||..+|.++.|
T Consensus 382 IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvaw--saDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDw 459 (480)
T KOG0271|consen 382 IASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAW--SADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDW 459 (480)
T ss_pred EEEeecccceeeeeCCCcchhhhhhhccceeEEEEe--ccCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEe
Confidence 764 678999999999999998888654 5555555 889999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEeeCCCcEEEEe
Q psy6442 174 SPDGELYASGSEDGTLRLWQ 193 (231)
Q Consensus 174 spd~~~laS~s~d~~v~iwd 193 (231)
+|||..++|++.|+.++||.
T Consensus 460 spDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 460 SPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred cCCCceeecCCCceEEEeec
Confidence 99999999999999999995
No 12
>KOG0286|consensus
Probab=99.96 E-value=3.2e-27 Score=181.67 Aligned_cols=177 Identities=24% Similarity=0.392 Sum_probs=157.2
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE- 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~- 79 (231)
+|-|.+..|||.++|+.+..|.||.+-|.+++++|. +.+.++||+.|++.++||++.+.++++++
T Consensus 162 ~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~--------------~~ntFvSg~cD~~aklWD~R~~~c~qtF~g 227 (343)
T KOG0286|consen 162 GSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPS--------------DGNTFVSGGCDKSAKLWDVRSGQCVQTFEG 227 (343)
T ss_pred cCCCceEEEEEcccceEEEEecCCcccEEEEecCCC--------------CCCeEEecccccceeeeeccCcceeEeecc
Confidence 467999999999999999999999999999999993 25568999999999999999999999987
Q ss_pred eCCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeeccc---eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc
Q psy6442 80 FGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVPA---QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG 155 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~ 155 (231)
+...+++|.|.|+|..++.+ .+++.++||++..+.+..+..+. ++.. +.++..|+++.+|..|.++.+||.-.+
T Consensus 228 hesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitS--v~FS~SGRlLfagy~d~~c~vWDtlk~ 305 (343)
T KOG0286|consen 228 HESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITS--VAFSKSGRLLFAGYDDFTCNVWDTLKG 305 (343)
T ss_pred cccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCcee--EEEcccccEEEeeecCCceeEeecccc
Confidence 56789999999999987765 56899999999988877765432 3443 445888999999999999999999999
Q ss_pred ceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEe
Q psy6442 156 AEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQ 193 (231)
Q Consensus 156 ~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd 193 (231)
+....+.||...|.++..+|||.-++|+|.|.++|||.
T Consensus 306 e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 306 ERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred ceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 99999999999999999999999999999999999994
No 13
>KOG0279|consensus
Probab=99.95 E-value=8.4e-27 Score=178.29 Aligned_cols=183 Identities=19% Similarity=0.313 Sum_probs=150.2
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF 80 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~ 80 (231)
+|-|+++|+||..+|+..+.|.||..-|.+++|++| +.+++|+|.|+||++|++-.. +..++.-
T Consensus 81 ~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~d---------------n~qivSGSrDkTiklwnt~g~-ck~t~~~ 144 (315)
T KOG0279|consen 81 ASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTD---------------NRQIVSGSRDKTIKLWNTLGV-CKYTIHE 144 (315)
T ss_pred ccccceEEEEEecCCcEEEEEEecCCceEEEEecCC---------------CceeecCCCcceeeeeeeccc-EEEEEec
Confidence 467999999999999999999999999999999997 567999999999999998653 3344432
Q ss_pred ---CCcceeEEEccCC--CEEE-EEcCCeEEEEECCCcceEEeeeccc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCC
Q psy6442 81 ---GAVPNSLEISRDG--TTIT-VTHGSCVTFLDANSLELIKEHKVPA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYS 153 (231)
Q Consensus 81 ---~~~~~~v~~~~~~--~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~ 153 (231)
...+.++.|+|+. ..++ ++.|+++++||+++.+....+..+. .++.+. .+|+|.++++|+.|+.+.+||+.
T Consensus 145 ~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~--vSpDGslcasGgkdg~~~LwdL~ 222 (315)
T KOG0279|consen 145 DSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVT--VSPDGSLCASGGKDGEAMLWDLN 222 (315)
T ss_pred CCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEE--ECCCCCEEecCCCCceEEEEEcc
Confidence 4578999999985 2322 3568899999999888777765544 344433 49999999999999999999999
Q ss_pred CcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeee
Q psy6442 154 TGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLW 203 (231)
Q Consensus 154 ~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~ 203 (231)
.++.++.++ |..+|++++|+|+...|+.+. +-.|+|||+.+++.+..+
T Consensus 223 ~~k~lysl~-a~~~v~sl~fspnrywL~~at-~~sIkIwdl~~~~~v~~l 270 (315)
T KOG0279|consen 223 EGKNLYSLE-AFDIVNSLCFSPNRYWLCAAT-ATSIKIWDLESKAVVEEL 270 (315)
T ss_pred CCceeEecc-CCCeEeeEEecCCceeEeecc-CCceEEEeccchhhhhhc
Confidence 999988876 889999999999976666554 455999999999887654
No 14
>KOG0291|consensus
Probab=99.95 E-value=2e-26 Score=196.02 Aligned_cols=208 Identities=18% Similarity=0.333 Sum_probs=177.1
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE- 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~- 79 (231)
++.-|++.+|+-.+...+-..+||...+.+++.+|||+ +++||+.||.|||||..++-|+.++.
T Consensus 326 ~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq---------------~iaTG~eDgKVKvWn~~SgfC~vTFte 390 (893)
T KOG0291|consen 326 CSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQ---------------LIATGAEDGKVKVWNTQSGFCFVTFTE 390 (893)
T ss_pred CCccceEEEEEeeccceeeeccccccceeeEEECCCCc---------------EEEeccCCCcEEEEeccCceEEEEecc
Confidence 34568999999988888888999999999999999854 58999999999999999999988875
Q ss_pred eCCcceeEEEccCCCEEEE-EcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCC-eEEEEeCCCcce
Q psy6442 80 FGAVPNSLEISRDGTTITV-THGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDL-KMYKFDYSTGAE 157 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~-~i~~~d~~~~~~ 157 (231)
+...++.+.|+..++.++. +-|++++.||.......+++..|.+....++..+|.+.++.+|+.|. .|++|++.+|++
T Consensus 391 Hts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGql 470 (893)
T KOG0291|consen 391 HTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQL 470 (893)
T ss_pred CCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCee
Confidence 5678999999999997665 56999999999999999999998888888888899999999998886 699999999999
Q ss_pred eeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCC-CeeeeeeccCCcccCCCCCCccccccce
Q psy6442 158 IESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVG-KTYGLWKCIEGGLNNSLGLDSSGHLNNV 225 (231)
Q Consensus 158 ~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (231)
+..+.||.+||.+++|+|++..|+|+|.|++||+||+-.. .+....+- .+....+++.++|+-+-|
T Consensus 471 lDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i--~sdvl~vsfrPdG~elaV 537 (893)
T KOG0291|consen 471 LDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEI--RSDVLAVSFRPDGKELAV 537 (893)
T ss_pred eehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEee--ccceeEEEEcCCCCeEEE
Confidence 9999999999999999999999999999999999997544 34445553 334445566666664433
No 15
>KOG0643|consensus
Probab=99.95 E-value=3.3e-26 Score=174.24 Aligned_cols=201 Identities=24% Similarity=0.378 Sum_probs=170.0
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF 80 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~ 80 (231)
|+.|.++.+|-...|+-|.+|.||+|.||+++.+-+ .+.++|+|.|.++|+||+.+|+++.++..
T Consensus 28 caKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~---------------s~~liTGSAD~t~kLWDv~tGk~la~~k~ 92 (327)
T KOG0643|consen 28 CAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWD---------------SKHLITGSADQTAKLWDVETGKQLATWKT 92 (327)
T ss_pred ecCCCCceEEEecCCceeeeecCCCceEEEEEecCC---------------cceeeeccccceeEEEEcCCCcEEEEeec
Confidence 578999999999899999999999999999998875 44589999999999999999999999999
Q ss_pred CCcceeEEEccCCCEEEEEcC------CeEEEEECCC-------cceEEeeeccc-eeEEEEEEecCCCCEEEEecCCCe
Q psy6442 81 GAVPNSLEISRDGTTITVTHG------SCVTFLDANS-------LELIKEHKVPA-QVHSASLLLNSERPIFVCGGEDLK 146 (231)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~~~~------~~i~~~d~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~ 146 (231)
+.++..+.|+++++.++++.+ ..+.++|++. .++...+..+. ++.. ..+.|-+.++++|.+++.
T Consensus 93 ~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~--a~Wg~l~~~ii~Ghe~G~ 170 (327)
T KOG0643|consen 93 NSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITS--ALWGPLGETIIAGHEDGS 170 (327)
T ss_pred CCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceee--eeecccCCEEEEecCCCc
Confidence 999999999999998776533 4678888773 23333333332 3333 345889999999999999
Q ss_pred EEEEeCCCcce-eeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCc
Q psy6442 147 MYKFDYSTGAE-IESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDS 218 (231)
Q Consensus 147 i~~~d~~~~~~-~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (231)
|..||.+++.. +..-+-|...|+++.++||..+++++|.|.+.++||..+-..+.....-.|.-++.|++--
T Consensus 171 is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~ 243 (327)
T KOG0643|consen 171 ISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLL 243 (327)
T ss_pred EEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeeecccccceeccccc
Confidence 99999999854 4566779999999999999999999999999999999999999988888888778777743
No 16
>KOG0286|consensus
Probab=99.95 E-value=1.4e-25 Score=172.77 Aligned_cols=217 Identities=21% Similarity=0.312 Sum_probs=184.4
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccc-------------------------------
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQA------------------------------- 49 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~------------------------------- 49 (231)
+|.||++.+||..|....+.+.--+..|..++|+|.|+.++.|+.|-..
T Consensus 73 aSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~ 152 (343)
T KOG0286|consen 73 ASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCR 152 (343)
T ss_pred eccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCccceeEEEE
Confidence 4789999999999998888888788999999999999999999876311
Q ss_pred -cCCCEEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEcc-CCCEEEE-EcCCeEEEEECCCcceEEeeecc-cee
Q psy6442 50 -KNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISR-DGTTITV-THGSCVTFLDANSLELIKEHKVP-AQV 124 (231)
Q Consensus 50 -~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~-~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~-~~~ 124 (231)
.++..|+|+|.|.|+.+||+++++.+..+. +...+.++.++| ++++++. +.+...++||.+.....+.+..+ ..+
T Consensus 153 f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDI 232 (343)
T KOG0286|consen 153 FLDDNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDI 232 (343)
T ss_pred EcCCCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeeccccccc
Confidence 177889999999999999999999887775 567899999999 6666543 56889999999999998888764 467
Q ss_pred EEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccC--CCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeee
Q psy6442 125 HSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKG--HFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGL 202 (231)
Q Consensus 125 ~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~--h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~ 202 (231)
+.+++ .|++.-+++|++|+++++||++....+..|.. -..+|++++||..|++|.+|..|.++.+||.-.++....
T Consensus 233 Nsv~f--fP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~ 310 (343)
T KOG0286|consen 233 NSVRF--FPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGV 310 (343)
T ss_pred ceEEE--ccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEE
Confidence 77666 88899999999999999999999888877763 346799999999999999999999999999999999999
Q ss_pred eeccCCcccCCCCCCccc
Q psy6442 203 WKCIEGGLNNSLGLDSSG 220 (231)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~ 220 (231)
+.+++|-.++ +++.++|
T Consensus 311 L~GHeNRvSc-l~~s~DG 327 (343)
T KOG0286|consen 311 LAGHENRVSC-LGVSPDG 327 (343)
T ss_pred eeccCCeeEE-EEECCCC
Confidence 9988887665 3444444
No 17
>KOG0289|consensus
Probab=99.95 E-value=6.2e-26 Score=182.54 Aligned_cols=211 Identities=23% Similarity=0.357 Sum_probs=179.2
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEE-EE
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQK-LE 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~-~~ 79 (231)
|+.|.++.+++..+++.+.+|+||+.+|..+.++|+. ..++++|.|..|+||......+... ..
T Consensus 237 GG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~---------------~~v~~aSad~~i~vws~~~~s~~~~~~~ 301 (506)
T KOG0289|consen 237 GGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDL---------------DTVITASADEIIRVWSVPLSSEPTSSRP 301 (506)
T ss_pred cCCCCceEEEecchhhhhhhccCcceEEEEEEeccch---------------hheeecCCcceEEeeccccccCcccccc
Confidence 5788899999999999999999999999999999973 3478999999999999876655433 34
Q ss_pred eCCcceeEEEccCCCEEEE-EcCCeEEEEECCCcceEEeeecc-ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcce
Q psy6442 80 FGAVPNSLEISRDGTTITV-THGSCVTFLDANSLELIKEHKVP-AQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAE 157 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~ 157 (231)
+..+++.+..+|.+.+++. +.+++..+.|.++...+...... ..+...+..++|++.++.+|..|+.+++||++++..
T Consensus 302 h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~ 381 (506)
T KOG0289|consen 302 HEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTN 381 (506)
T ss_pred ccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccc
Confidence 6788999999999998765 56789999999988877655442 223333444599999999999999999999999999
Q ss_pred eeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCcccccccee
Q psy6442 158 IESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGHLNNVH 226 (231)
Q Consensus 158 ~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (231)
...|.+|.++|..++|+.+|.+||++++|+.|++||++.-+.+...+.-+..--+++.||.+|..+.++
T Consensus 382 ~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~ 450 (506)
T KOG0289|consen 382 VAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIA 450 (506)
T ss_pred cccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEee
Confidence 999999999999999999999999999999999999999888877766555557889999999988754
No 18
>KOG0282|consensus
Probab=99.94 E-value=1.4e-26 Score=188.21 Aligned_cols=189 Identities=23% Similarity=0.363 Sum_probs=158.6
Q ss_pred CCcCCCceeeeccC-CCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE
Q psy6442 1 MCVDGKPMLRQGDT-GDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~-g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~ 79 (231)
+++|++|+||++.. ++++++|.||..+|..+.|+.+| ..+.|+|.|+++|+||+.+|+++..+.
T Consensus 233 ~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g---------------~~fLS~sfD~~lKlwDtETG~~~~~f~ 297 (503)
T KOG0282|consen 233 GGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCG---------------TSFLSASFDRFLKLWDTETGQVLSRFH 297 (503)
T ss_pred cCCCceEEEEEEecCcceehhhhcchhhhhhhhccccC---------------CeeeeeecceeeeeeccccceEEEEEe
Confidence 58999999999955 89999999999999999999874 458999999999999999999999999
Q ss_pred eCCcceeEEEccCCC-EEEEE-cCCeEEEEECCCcceEEeeeccc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcc
Q psy6442 80 FGAVPNSLEISRDGT-TITVT-HGSCVTFLDANSLELIKEHKVPA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA 156 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~-~~~~~-~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~ 156 (231)
.+..++++.+.|++. .++++ .++.|+.||+++.+.++++..+. .+..+.+ -+++..+++.++|+.+++|+...+.
T Consensus 298 ~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F--~~~g~rFissSDdks~riWe~~~~v 375 (503)
T KOG0282|consen 298 LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITF--VDEGRRFISSSDDKSVRIWENRIPV 375 (503)
T ss_pred cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEE--ccCCceEeeeccCccEEEEEcCCCc
Confidence 999999999999994 44444 47899999999999888776554 3444444 6788889999999999999865432
Q ss_pred ee----------------------------------------------eeccCCC--CCeeEEEEcCCCCEEEEeeCCCc
Q psy6442 157 EI----------------------------------------------ESFKGHF--GPIHCVKFSPDGELYASGSEDGT 188 (231)
Q Consensus 157 ~~----------------------------------------------~~~~~h~--~~V~~v~~spd~~~laS~s~d~~ 188 (231)
.+ ..|+||. +--..+.|||||++|+||+.||.
T Consensus 376 ~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~ 455 (503)
T KOG0282|consen 376 PIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGK 455 (503)
T ss_pred cchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCcc
Confidence 11 1355664 33567899999999999999999
Q ss_pred EEEEeCCCCCeeeeeecc
Q psy6442 189 LRLWQTNVGKTYGLWKCI 206 (231)
Q Consensus 189 v~iwd~~~~~~~~~~~~~ 206 (231)
+.+||.++-+.+..|+..
T Consensus 456 v~~wdwkt~kl~~~lkah 473 (503)
T KOG0282|consen 456 VNFWDWKTTKLVSKLKAH 473 (503)
T ss_pred EEEeechhhhhhhccccC
Confidence 999999999999888876
No 19
>KOG0285|consensus
Probab=99.94 E-value=3.2e-25 Score=174.93 Aligned_cols=171 Identities=23% Similarity=0.366 Sum_probs=149.6
Q ss_pred CeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCC
Q psy6442 16 DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGT 94 (231)
Q Consensus 16 ~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~ 94 (231)
++-+.++||.|.|.++++.|. ++.++|+|.|++++|||+.+++...++. +...+..|++++-..
T Consensus 142 Kl~rVi~gHlgWVr~vavdP~---------------n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHp 206 (460)
T KOG0285|consen 142 KLYRVISGHLGWVRSVAVDPG---------------NEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHP 206 (460)
T ss_pred eehhhhhhccceEEEEeeCCC---------------ceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCc
Confidence 345667899999999999996 6679999999999999999999888876 667889999999888
Q ss_pred EEEE-EcCCeEEEEECCCcceEEeeeccc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEE
Q psy6442 95 TITV-THGSCVTFLDANSLELIKEHKVPA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVK 172 (231)
Q Consensus 95 ~~~~-~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~ 172 (231)
+++. +.++.++.||+...+.++.+-.+. .+.+ +..+|.-..+++|+.|.++++||+++...++.+.||..+|.++.
T Consensus 207 YlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~--L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~ 284 (460)
T KOG0285|consen 207 YLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYC--LDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVM 284 (460)
T ss_pred eEEEecCCCeeEEEechhhhhHHHhccccceeEE--EeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEE
Confidence 7765 567899999999988888765543 4443 44588888999999999999999999999999999999999999
Q ss_pred EcCCCCEEEEeeCCCcEEEEeCCCCCeeeee
Q psy6442 173 FSPDGELYASGSEDGTLRLWQTNVGKTYGLW 203 (231)
Q Consensus 173 ~spd~~~laS~s~d~~v~iwd~~~~~~~~~~ 203 (231)
+.|-+..++|||.|++|++||++.||++...
T Consensus 285 ~~~~dpqvit~S~D~tvrlWDl~agkt~~tl 315 (460)
T KOG0285|consen 285 CQPTDPQVITGSHDSTVRLWDLRAGKTMITL 315 (460)
T ss_pred eecCCCceEEecCCceEEEeeeccCceeEee
Confidence 9998889999999999999999999987654
No 20
>KOG0315|consensus
Probab=99.94 E-value=4.3e-24 Score=161.33 Aligned_cols=201 Identities=24% Similarity=0.295 Sum_probs=164.1
Q ss_pred CCceeeeccCCC--eEeeeecccccEEEEEECCCCceeEecccccccc--------------------------CCCEEE
Q psy6442 5 GKPMLRQGDTGD--WIGTFEGHKGCVWGVDINKDASKAASGAADFQAK--------------------------NNTRLI 56 (231)
Q Consensus 5 ~~~~~~~~~~g~--~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~--------------------------~~~~l~ 56 (231)
-.|||+|.++++ .+.+|.+|+..|.++.|..+|+-..+|++|..++ +...|+
T Consensus 61 qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLi 140 (311)
T KOG0315|consen 61 QHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELI 140 (311)
T ss_pred CeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhccCCCCcceEEecCCcceEE
Confidence 368999998886 4999999999999999999999999999986543 557799
Q ss_pred EEeCCCCEEEEeCCCCCceEEEE--eCCcceeEEEccCCCEEEEEc-CCeEEEEECCCcceEEe----eeccc-eeEEEE
Q psy6442 57 SCAEDKTVRLWDVSASAEVQKLE--FGAVPNSLEISRDGTTITVTH-GSCVTFLDANSLELIKE----HKVPA-QVHSAS 128 (231)
Q Consensus 57 s~s~D~ti~iwd~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~-~~~i~~~d~~~~~~~~~----~~~~~-~~~~~~ 128 (231)
+|..+|.|++||+....+...+. -...+.++...|||..+++.. .+...+|++........ ++.+. .-....
T Consensus 141 s~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~ 220 (311)
T KOG0315|consen 141 SGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILR 220 (311)
T ss_pred eecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEE
Confidence 99999999999999877665543 235678999999999887654 57888898765332211 11211 223345
Q ss_pred EEecCCCCEEEEecCCCeEEEEeCCCc-ceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeec
Q psy6442 129 LLLNSERPIFVCGGEDLKMYKFDYSTG-AEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKC 205 (231)
Q Consensus 129 ~~~~~~~~~~~~g~~d~~i~~~d~~~~-~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~ 205 (231)
+..+|+.+.+++++.|.++++|+.+.. +....+++|..-+++.+||.|+++|++|+.|+++|+|++..++++.+|++
T Consensus 221 C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~g 298 (311)
T KOG0315|consen 221 CLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQG 298 (311)
T ss_pred EEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecCC
Confidence 556999999999999999999999876 45567899999999999999999999999999999999999999888764
No 21
>KOG0293|consensus
Probab=99.93 E-value=1.3e-25 Score=179.89 Aligned_cols=196 Identities=23% Similarity=0.338 Sum_probs=161.9
Q ss_pred CCcCCCceeeeccCCCeEeeee-cccccEEEEEECCCCceeEeccccccc---------------------------cCC
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFE-GHKGCVWGVDINKDASKAASGAADFQA---------------------------KNN 52 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~-gH~~~V~~~~~~~~~~~~~s~~~d~~~---------------------------~~~ 52 (231)
|+-|.-++|||+++|++.+.++ +|...+.+++|.|||..+.+|+-|..+ .++
T Consensus 287 Cg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dg 366 (519)
T KOG0293|consen 287 CGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILGNWEGVRDPKVHDLAITYDG 366 (519)
T ss_pred cCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchhhcccccccceeEEEEEcCCC
Confidence 4567779999999999998875 456789999999999999999776322 178
Q ss_pred CEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeeccce--eEEEEE
Q psy6442 53 TRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVPAQ--VHSASL 129 (231)
Q Consensus 53 ~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~ 129 (231)
+.+++...|..|++++..+...+..+....++++.+++.+++++++. ....+++||......++.+..... ...-++
T Consensus 367 k~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSC 446 (519)
T KOG0293|consen 367 KYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSC 446 (519)
T ss_pred cEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEec
Confidence 88999999999999999887777777778899999999999998876 467999999987776666544321 222222
Q ss_pred EecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCC-CCEEEEeeCCCcEEEEeCCC
Q psy6442 130 LLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPD-GELYASGSEDGTLRLWQTNV 196 (231)
Q Consensus 130 ~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd-~~~laS~s~d~~v~iwd~~~ 196 (231)
....+..++++|++|..|++|+..++.++..+.||...|++|+|+|. ..++|||++||+||||-...
T Consensus 447 Fgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 447 FGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred cCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence 23445678999999999999999999999999999999999999995 57999999999999998653
No 22
>KOG0265|consensus
Probab=99.93 E-value=5.1e-25 Score=170.06 Aligned_cols=179 Identities=24% Similarity=0.368 Sum_probs=155.9
Q ss_pred CCcCCCceeeecc-CCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE
Q psy6442 1 MCVDGKPMLRQGD-TGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~-~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~ 79 (231)
+|.|..|.||... ..+...+++||++.|..+.|.+++ ..|+|||.|++++.||.+++++.+...
T Consensus 65 gG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~---------------s~i~S~gtDk~v~~wD~~tG~~~rk~k 129 (338)
T KOG0265|consen 65 GGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDG---------------SHILSCGTDKTVRGWDAETGKRIRKHK 129 (338)
T ss_pred cCCcceEEEEeccccccceeeeccccceeEeeeeccCC---------------CEEEEecCCceEEEEecccceeeehhc
Confidence 5789999999964 456788899999999999999875 458999999999999999999988876
Q ss_pred e-CCcceeEEEccCCCEEEEE--cCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcc
Q psy6442 80 F-GAVPNSLEISRDGTTITVT--HGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA 156 (231)
Q Consensus 80 ~-~~~~~~v~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~ 156 (231)
. ..-++++..+.-+..++.+ .++++++||.+..+.++++..+.+..+..+ ...+..+.+|+-|..|++||++.+.
T Consensus 130 ~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f--~d~s~qv~sggIdn~ikvWd~r~~d 207 (338)
T KOG0265|consen 130 GHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGF--KDTSDQVISGGIDNDIKVWDLRKND 207 (338)
T ss_pred cccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEe--cccccceeeccccCceeeeccccCc
Confidence 4 4567777766666666654 578999999999999888877777777666 6777789999999999999999999
Q ss_pred eeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCC
Q psy6442 157 EIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNV 196 (231)
Q Consensus 157 ~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~ 196 (231)
.++++.||..+|+.+..+|+|.++.|-+.|.++++||++-
T Consensus 208 ~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp 247 (338)
T KOG0265|consen 208 GLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRP 247 (338)
T ss_pred ceEEeecccCceeeEEeccCCCccccccccceEEEEEecc
Confidence 9999999999999999999999999999999999999853
No 23
>KOG0277|consensus
Probab=99.93 E-value=2.4e-25 Score=168.50 Aligned_cols=209 Identities=22% Similarity=0.285 Sum_probs=164.4
Q ss_pred CCcCCCceeeec-cCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE
Q psy6442 1 MCVDGKPMLRQG-DTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE 79 (231)
Q Consensus 1 ~~~d~~~~~~~~-~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~ 79 (231)
++-||.+|||+. .....|+.|+.|...|.+++|++.. ...++++|+|+|||+|+...+..+.++.
T Consensus 79 a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~--------------r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~ 144 (311)
T KOG0277|consen 79 ASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVR--------------RRIFLTSSWDGTIKLWDPNRPNSVQTFN 144 (311)
T ss_pred EecCceEEEeccCCCCcchhHHHhhhhheEEecccccc--------------ceeEEeeccCCceEeecCCCCcceEeec
Confidence 467999999995 2334799999999999999999853 4457788999999999998888887765
Q ss_pred -eCCcceeEEEccCCCEEEE--EcCCeEEEEECCCcceEEeeeccc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCC-
Q psy6442 80 -FGAVPNSLEISRDGTTITV--THGSCVTFLDANSLELIKEHKVPA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYST- 154 (231)
Q Consensus 80 -~~~~~~~v~~~~~~~~~~~--~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~- 154 (231)
+...++..+|+|....+++ +.++.+++||.+.......+..+. ++.++-+. ..+..++++|+.|..|+.||++.
T Consensus 145 gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~-ky~~~vl~Tg~vd~~vr~wDir~~ 223 (311)
T KOG0277|consen 145 GHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWS-KYNHNVLATGGVDNLVRGWDIRNL 223 (311)
T ss_pred CCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeeccc-ccCCcEEEecCCCceEEEEehhhc
Confidence 4567899999998775554 567899999987654433344443 44443332 45677899999999999999976
Q ss_pred cceeeeccCCCCCeeEEEEcCCC-CEEEEeeCCCcEEEEeCCCCCe------------ee-eeeccCCcccCCCCCCccc
Q psy6442 155 GAEIESFKGHFGPIHCVKFSPDG-ELYASGSEDGTLRLWQTNVGKT------------YG-LWKCIEGGLNNSLGLDSSG 220 (231)
Q Consensus 155 ~~~~~~~~~h~~~V~~v~~spd~-~~laS~s~d~~v~iwd~~~~~~------------~~-~~~~~~~~~~~~~~~~~~~ 220 (231)
..++..+.+|.-+|+.++|||.. .+||||+.|-++||||...+.. .. -|....+++-+..++|+.-
T Consensus 224 r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l 303 (311)
T KOG0277|consen 224 RTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELL 303 (311)
T ss_pred cccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeecccccce
Confidence 45678889999999999999974 6999999999999999874432 11 2666678999999999988
Q ss_pred cccc
Q psy6442 221 HLNN 224 (231)
Q Consensus 221 ~~~~ 224 (231)
+.|+
T Consensus 304 ~Vw~ 307 (311)
T KOG0277|consen 304 YVWN 307 (311)
T ss_pred eeec
Confidence 7765
No 24
>KOG0266|consensus
Probab=99.93 E-value=3.5e-24 Score=183.50 Aligned_cols=191 Identities=24% Similarity=0.394 Sum_probs=164.5
Q ss_pred CcCCCceeeeccCCC--eEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeC-CCCCceEEE
Q psy6442 2 CVDGKPMLRQGDTGD--WIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDV-SASAEVQKL 78 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~--~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~-~~~~~~~~~ 78 (231)
+.|+.+++|...+++ +++.+.+|...|..++|+|+++ ++++++.|++|||||+ ..+.+++++
T Consensus 178 ~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~---------------~l~s~s~D~tiriwd~~~~~~~~~~l 242 (456)
T KOG0266|consen 178 SSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGS---------------YLLSGSDDKTLRIWDLKDDGRNLKTL 242 (456)
T ss_pred cCCCcEEEeecccccchhhccccccccceeeeEECCCCc---------------EEEEecCCceEEEeeccCCCeEEEEe
Confidence 578999999998888 8888999999999999999854 5899999999999999 455777777
Q ss_pred E-eCCcceeEEEccCCCEEE-EEcCCeEEEEECCCcceEEeeeccc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc
Q psy6442 79 E-FGAVPNSLEISRDGTTIT-VTHGSCVTFLDANSLELIKEHKVPA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG 155 (231)
Q Consensus 79 ~-~~~~~~~v~~~~~~~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~ 155 (231)
. +...+++++|+|+++.++ .+.++++++||..+.++.+....+. ++..+. +++++..+++++.|+.|++||+.++
T Consensus 243 ~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~--f~~d~~~l~s~s~d~~i~vwd~~~~ 320 (456)
T KOG0266|consen 243 KGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLA--FSPDGNLLVSASYDGTIRVWDLETG 320 (456)
T ss_pred cCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEE--ECCCCCEEEEcCCCccEEEEECCCC
Confidence 4 567889999999996554 4568899999999988888877654 455444 4899999999999999999999998
Q ss_pred c--eeeeccCCCCC--eeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCc
Q psy6442 156 A--EIESFKGHFGP--IHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGG 209 (231)
Q Consensus 156 ~--~~~~~~~h~~~--V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~ 209 (231)
. .+..+.++..+ ++++.|+|++.++++++.|+++++||+..++....++...+.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~ 378 (456)
T KOG0266|consen 321 SKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNL 378 (456)
T ss_pred ceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCc
Confidence 8 56777777655 999999999999999999999999999999999888887776
No 25
>KOG0313|consensus
Probab=99.93 E-value=2.7e-24 Score=170.61 Aligned_cols=223 Identities=22% Similarity=0.249 Sum_probs=170.1
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCC---CceeEecccccccc---------------------------
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKD---ASKAASGAADFQAK--------------------------- 50 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~---~~~~~s~~~d~~~~--------------------------- 50 (231)
+|+||.+|+|+ ..|+.+.++.||+++|.+++|-.. ...+++++.|...+
T Consensus 121 gsYDg~~riWd-~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sV 199 (423)
T KOG0313|consen 121 GSYDGTSRIWD-LKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSV 199 (423)
T ss_pred eecCCeeEEEe-cCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEE
Confidence 58999999999 559999999999999998888533 34588998875432
Q ss_pred ----CCCEEEEEeCCCCEEEEeCCC-------------------------CCceEEEE-eCCcceeEEEccCCCEEEEEc
Q psy6442 51 ----NNTRLISCAEDKTVRLWDVSA-------------------------SAEVQKLE-FGAVPNSLEISRDGTTITVTH 100 (231)
Q Consensus 51 ----~~~~l~s~s~D~ti~iwd~~~-------------------------~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~ 100 (231)
++.+++|+|+|.+++||+... +.++.++. +...+.+|.|++.+....++-
T Consensus 200 sv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~Sw 279 (423)
T KOG0313|consen 200 SVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSW 279 (423)
T ss_pred EecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCCCceEeecc
Confidence 789999999999999999321 01122222 346788999999666666777
Q ss_pred CCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcc---eeeeccCCCCCeeEEEEcCCC
Q psy6442 101 GSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA---EIESFKGHFGPIHCVKFSPDG 177 (231)
Q Consensus 101 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~---~~~~~~~h~~~V~~v~~spd~ 177 (231)
|-+|+.||+.+.....+...+....++.. .+...++++|+.|..|++||.+++. ..++|.||++-|.++.|+|..
T Consensus 280 DHTIk~WDletg~~~~~~~~~ksl~~i~~--~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~ 357 (423)
T KOG0313|consen 280 DHTIKVWDLETGGLKSTLTTNKSLNCISY--SPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTN 357 (423)
T ss_pred cceEEEEEeecccceeeeecCcceeEeec--ccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCC
Confidence 88999999999888877777766665554 7788899999999999999998653 347789999999999999965
Q ss_pred -CEEEEeeCCCcEEEEeCCCCC-eeeeeec-----cCCcccCCCCCCcccccccee
Q psy6442 178 -ELYASGSEDGTLRLWQTNVGK-TYGLWKC-----IEGGLNNSLGLDSSGHLNNVH 226 (231)
Q Consensus 178 -~~laS~s~d~~v~iwd~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 226 (231)
.+|+|++.|+++++||+++.+ +.-.... ....|+..++++..|-=.++|
T Consensus 358 ~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~~~~IvSGGaD~~l~ 413 (423)
T KOG0313|consen 358 EFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNEGGLIVSGGADNKLR 413 (423)
T ss_pred ceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccCCceEEeccCcceEE
Confidence 589999999999999999887 4322211 122344444555555444444
No 26
>KOG0288|consensus
Probab=99.93 E-value=2.7e-25 Score=177.85 Aligned_cols=203 Identities=23% Similarity=0.283 Sum_probs=164.4
Q ss_pred CcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeC
Q psy6442 2 CVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFG 81 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~ 81 (231)
+.|+++++|+.+.+++.++|.||+++|.++.|... ..++++++.|++||+||+....|.+++-..
T Consensus 238 s~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~---------------~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~ 302 (459)
T KOG0288|consen 238 SNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLS---------------HSRVVSGSADRTIKLWDLQKAYCSKTVLPG 302 (459)
T ss_pred cCCCceeeeeccchhhhhhhcccccceeeehhhcc---------------ccceeeccccchhhhhhhhhhheecccccc
Confidence 67999999999999999999999999999988754 334899999999999999999998887767
Q ss_pred CcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeee
Q psy6442 82 AVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIES 160 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~ 160 (231)
...+++... ...++-+ .+..+++||.+.............+.++.. +.++..+.+.+.|-++.++|+++.+..++
T Consensus 303 S~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~l--s~~g~~lLsssRDdtl~viDlRt~eI~~~ 378 (459)
T KOG0288|consen 303 SQCNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDL--SMDGLELLSSSRDDTLKVIDLRTKEIRQT 378 (459)
T ss_pred ccccceEec--ceeeeecccccceEEEeccCCceeeEeecCcceeeEee--ccCCeEEeeecCCCceeeeecccccEEEE
Confidence 777777776 2233333 367899999999888888877777766555 77888888889999999999998877766
Q ss_pred ccCC----CCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCc-ccCCCCCCcccccc
Q psy6442 161 FKGH----FGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGG-LNNSLGLDSSGHLN 223 (231)
Q Consensus 161 ~~~h----~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 223 (231)
+.+. ...++.+.|||++.|+|+||.||.|+||++.++|.....+..-.+ -.+.++|.++|..+
T Consensus 379 ~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~L 446 (459)
T KOG0288|consen 379 FSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGL 446 (459)
T ss_pred eeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchh
Confidence 5421 234888999999999999999999999999999987766542222 45677888877643
No 27
>KOG0276|consensus
Probab=99.93 E-value=1.7e-24 Score=181.14 Aligned_cols=203 Identities=20% Similarity=0.341 Sum_probs=167.9
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCC-CceEEEE
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSAS-AEVQKLE 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~-~~~~~~~ 79 (231)
|++|.+||+++-+|++.+.+|..|.+.|.++..+|. ...++|+|.|.+||+||-..+ .|.++++
T Consensus 73 GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt---------------~P~vLtsSDDm~iKlW~we~~wa~~qtfe 137 (794)
T KOG0276|consen 73 GSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPT---------------LPYVLTSSDDMTIKLWDWENEWACEQTFE 137 (794)
T ss_pred ecCCceEEEEecccceeeEEeeccccceeeeeecCC---------------CCeEEecCCccEEEEeeccCceeeeeEEc
Confidence 689999999999999999999999999999999996 456899999999999998755 5555554
Q ss_pred -eCCcceeEEEccCCCE-E-EEEcCCeEEEEECCCcceEEeeecc-ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc
Q psy6442 80 -FGAVPNSLEISRDGTT-I-TVTHGSCVTFLDANSLELIKEHKVP-AQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG 155 (231)
Q Consensus 80 -~~~~~~~v~~~~~~~~-~-~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~ 155 (231)
+.-.++++++.|.+.. + .++-|+++++|......+..+.+.+ ..++++.....++-+.+++|++|.++++||..+.
T Consensus 138 GH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk 217 (794)
T KOG0276|consen 138 GHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTK 217 (794)
T ss_pred CcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchH
Confidence 3456899999997653 3 3456899999999888777776654 3677777777778889999999999999999999
Q ss_pred ceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCee--------eeeeccCCcccCCCCCCc
Q psy6442 156 AEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTY--------GLWKCIEGGLNNSLGLDS 218 (231)
Q Consensus 156 ~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~--------~~~~~~~~~~~~~~~~~~ 218 (231)
+++++++||+..|..+.|+|.-.+++|||+||++|||+..+-+.. -.|.-....-.+.|++.+
T Consensus 218 ~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~ 288 (794)
T KOG0276|consen 218 SCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGF 288 (794)
T ss_pred HHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEec
Confidence 999999999999999999999999999999999999998766542 246554445555544443
No 28
>KOG0281|consensus
Probab=99.93 E-value=1.3e-25 Score=176.69 Aligned_cols=190 Identities=17% Similarity=0.399 Sum_probs=150.7
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEecccccccc-------------------------CCCEE
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK-------------------------NNTRL 55 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~-------------------------~~~~l 55 (231)
|..|.++.+||.++-.++..|.||+|.|.++++.. ..+.+|+.|.+++ ++.++
T Consensus 213 GlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~--rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~ng~m 290 (499)
T KOG0281|consen 213 GLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDE--RVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSNGYM 290 (499)
T ss_pred ccccCceEEeccccHHHHHhhhcCCCcEEeeeccc--eEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeCCEE
Confidence 45789999999988889999999999999998754 4788887775543 67889
Q ss_pred EEEeCCCCEEEEeCCCCCce---EE-EEeCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccceeEEEEEEe
Q psy6442 56 ISCAEDKTVRLWDVSASAEV---QK-LEFGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLL 131 (231)
Q Consensus 56 ~s~s~D~ti~iwd~~~~~~~---~~-~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 131 (231)
+|||.|.++.+||+.+...+ +. ..+...++.|.++.- ..+.++.+.+|+.|+..+.+.+++...+..-.+ +.
T Consensus 291 vtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~k-yIVsASgDRTikvW~~st~efvRtl~gHkRGIA-Cl-- 366 (499)
T KOG0281|consen 291 VTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIA-CL-- 366 (499)
T ss_pred EEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccccc-eEEEecCCceEEEEeccceeeehhhhcccccce-eh--
Confidence 99999999999998765421 11 123456677766543 334456788999999999999888766543322 22
Q ss_pred cCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCC
Q psy6442 132 NSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 132 ~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~ 198 (231)
-..++++++|+.|.+|++||...|.++..++||..-|.++.|.. ..++||+.||.|+|||+.++.
T Consensus 367 QYr~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd~--krIVSGaYDGkikvWdl~aal 431 (499)
T KOG0281|consen 367 QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN--KRIVSGAYDGKIKVWDLQAAL 431 (499)
T ss_pred hccCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeecC--ceeeeccccceEEEEeccccc
Confidence 45788999999999999999999999999999999999999954 579999999999999997664
No 29
>KOG0266|consensus
Probab=99.93 E-value=1e-23 Score=180.70 Aligned_cols=189 Identities=24% Similarity=0.350 Sum_probs=158.6
Q ss_pred CCcCCCceeeec-cCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE
Q psy6442 1 MCVDGKPMLRQG-DTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE 79 (231)
Q Consensus 1 ~~~d~~~~~~~~-~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~ 79 (231)
++.|+++|+|+. ..++.+++++||...|++++|+|++ +.+++|+.|++|||||++++++...+.
T Consensus 221 ~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g---------------~~i~Sgs~D~tvriWd~~~~~~~~~l~ 285 (456)
T KOG0266|consen 221 GSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDG---------------NLLVSGSDDGTVRIWDVRTGECVRKLK 285 (456)
T ss_pred ecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCC---------------CEEEEecCCCcEEEEeccCCeEEEeee
Confidence 478999999999 6778999999999999999999985 358999999999999999999998887
Q ss_pred e-CCcceeEEEccCCCEEEEE-cCCeEEEEECCCcc--eEEeeeccc---eeEEEEEEecCCCCEEEEecCCCeEEEEeC
Q psy6442 80 F-GAVPNSLEISRDGTTITVT-HGSCVTFLDANSLE--LIKEHKVPA---QVHSASLLLNSERPIFVCGGEDLKMYKFDY 152 (231)
Q Consensus 80 ~-~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~ 152 (231)
. ...+..+++++++..+..+ .++.+++||..+.. +........ .+.. +.+++++..++++..|+.+++||+
T Consensus 286 ~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~--~~fsp~~~~ll~~~~d~~~~~w~l 363 (456)
T KOG0266|consen 286 GHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTS--VQFSPNGKYLLSASLDRTLKLWDL 363 (456)
T ss_pred ccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeE--EEECCCCcEEEEecCCCeEEEEEc
Confidence 4 5688999999999988765 47899999999887 334433221 2333 345899999999999999999999
Q ss_pred CCcceeeeccCCCCC---eeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeecc
Q psy6442 153 STGAEIESFKGHFGP---IHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCI 206 (231)
Q Consensus 153 ~~~~~~~~~~~h~~~---V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~ 206 (231)
..+....++.+|... +.+...++.+.++.+++.|+.|.+||..++...+..+..
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h 420 (456)
T KOG0266|consen 364 RSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGH 420 (456)
T ss_pred cCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccchhhhhcCC
Confidence 999999999888864 445556788999999999999999999988777665544
No 30
>PTZ00420 coronin; Provisional
Probab=99.92 E-value=5.3e-23 Score=177.89 Aligned_cols=187 Identities=17% Similarity=0.142 Sum_probs=147.4
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCc------
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAE------ 74 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~------ 74 (231)
|+.++.++||+..+...+..|.+|.+.|.+++|+|+. +..|+|||.|++|+|||+.++..
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~--------------~~lLASgS~DgtIrIWDi~t~~~~~~~i~ 115 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCF--------------SEILASGSEDLTIRVWEIPHNDESVKEIK 115 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCC--------------CCEEEEEeCCCeEEEEECCCCCccccccc
Confidence 4678899999987778899999999999999999852 45689999999999999976421
Q ss_pred --eEEEE-eCCcceeEEEccCCCEEE--EEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEE
Q psy6442 75 --VQKLE-FGAVPNSLEISRDGTTIT--VTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYK 149 (231)
Q Consensus 75 --~~~~~-~~~~~~~v~~~~~~~~~~--~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~ 149 (231)
+..+. +...+.+++|+|++..++ ++.++.+++||.........+..+..+..+. +++++.++++++.|+.|++
T Consensus 116 ~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~Sls--wspdG~lLat~s~D~~IrI 193 (568)
T PTZ00420 116 DPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLK--WNIKGNLLSGTCVGKHMHI 193 (568)
T ss_pred cceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEE--ECCCCCEEEEEecCCEEEE
Confidence 12222 456789999999987654 3568999999998877665554444455444 4889999999999999999
Q ss_pred EeCCCcceeeeccCCCCCeeE-----EEEcCCCCEEEEeeCCC----cEEEEeCCC-CCeeeee
Q psy6442 150 FDYSTGAEIESFKGHFGPIHC-----VKFSPDGELYASGSEDG----TLRLWQTNV-GKTYGLW 203 (231)
Q Consensus 150 ~d~~~~~~~~~~~~h~~~V~~-----v~~spd~~~laS~s~d~----~v~iwd~~~-~~~~~~~ 203 (231)
||+++++.+.++.+|.+.+.+ ..|++++.+|+|++.|+ +|+|||+++ +++....
T Consensus 194 wD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~ 257 (568)
T PTZ00420 194 IDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTM 257 (568)
T ss_pred EECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEE
Confidence 999999999999999876543 34568999999988774 799999985 5555443
No 31
>KOG0291|consensus
Probab=99.92 E-value=1.7e-23 Score=178.34 Aligned_cols=182 Identities=18% Similarity=0.258 Sum_probs=154.1
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF 80 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~ 80 (231)
|+.||+|++|+...|-++.||..|+..|..+.|+.. +..|+++|-|||||.||+...+..+++..
T Consensus 368 G~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~---------------g~~llssSLDGtVRAwDlkRYrNfRTft~ 432 (893)
T KOG0291|consen 368 GAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTAR---------------GNVLLSSSLDGTVRAWDLKRYRNFRTFTS 432 (893)
T ss_pred ccCCCcEEEEeccCceEEEEeccCCCceEEEEEEec---------------CCEEEEeecCCeEEeeeecccceeeeecC
Confidence 689999999999999999999999999999999976 45589999999999999999999888877
Q ss_pred CC--cceeEEEccCCCEEEEEcC--CeEEEEECCCcceEEeeecc-ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc
Q psy6442 81 GA--VPNSLEISRDGTTITVTHG--SCVTFLDANSLELIKEHKVP-AQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG 155 (231)
Q Consensus 81 ~~--~~~~v~~~~~~~~~~~~~~--~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~ 155 (231)
+. +..+++..|.|..++++.. -.|.+|+..+++.+-....+ .++..+++ ++.+..++++++|.+|++||+-..
T Consensus 433 P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f--~~~~~~LaS~SWDkTVRiW~if~s 510 (893)
T KOG0291|consen 433 PEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSF--SPDGSLLASGSWDKTVRIWDIFSS 510 (893)
T ss_pred CCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEE--ccccCeEEeccccceEEEEEeecc
Confidence 65 4568889999998887653 37889999999887665443 46665555 889999999999999999998654
Q ss_pred c-eeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCee
Q psy6442 156 A-EIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 156 ~-~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~ 200 (231)
. ...+++ +...+..++|+|||..||.+.-||.|.+||+..+...
T Consensus 511 ~~~vEtl~-i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~ 555 (893)
T KOG0291|consen 511 SGTVETLE-IRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQV 555 (893)
T ss_pred CceeeeEe-eccceeEEEEcCCCCeEEEEEecceEEEEEhhhceee
Confidence 3 344554 7778999999999999999999999999999777655
No 32
>KOG0316|consensus
Probab=99.92 E-value=5.4e-24 Score=159.74 Aligned_cols=183 Identities=28% Similarity=0.416 Sum_probs=151.7
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE- 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~- 79 (231)
|+.|.+||||++..|.+|++|+||.-.|..++.+.| +..+++|+.|+.+.+||+.+++..+.+.
T Consensus 35 cGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~D---------------nskf~s~GgDk~v~vwDV~TGkv~Rr~rg 99 (307)
T KOG0316|consen 35 CGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSD---------------NSKFASCGGDKAVQVWDVNTGKVDRRFRG 99 (307)
T ss_pred cCCCceEEeecccccceeeeecCCCceeeecccccc---------------ccccccCCCCceEEEEEcccCeeeeeccc
Confidence 578999999999999999999999999999887765 5678999999999999999999988875
Q ss_pred eCCcceeEEEccCCCEEEE-EcCCeEEEEECCC--cceEEeeecc-ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc
Q psy6442 80 FGAVPNSLEISRDGTTITV-THGSCVTFLDANS--LELIKEHKVP-AQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG 155 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~ 155 (231)
+..+++.++|..+...++. +.+..++.||-++ .++++.+... ..+..+.+ ....+++|+.||+++.||++.|
T Consensus 100 H~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v----~~heIvaGS~DGtvRtydiR~G 175 (307)
T KOG0316|consen 100 HLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDV----AEHEIVAGSVDGTVRTYDIRKG 175 (307)
T ss_pred ccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEe----cccEEEeeccCCcEEEEEeecc
Confidence 5689999999998876654 4688999999664 4445554332 23333322 3456899999999999999999
Q ss_pred ceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeee
Q psy6442 156 AEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWK 204 (231)
Q Consensus 156 ~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~ 204 (231)
.+...+.+| ||++++||||++....++.|+++|+-|-.+|+..+..+
T Consensus 176 ~l~sDy~g~--pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYk 222 (307)
T KOG0316|consen 176 TLSSDYFGH--PITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYK 222 (307)
T ss_pred eeehhhcCC--cceeEEecCCCCEEEEeeccceeeecccchhHHHHHhc
Confidence 988887776 79999999999999999999999999999998654433
No 33
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=6e-23 Score=187.10 Aligned_cols=186 Identities=17% Similarity=0.270 Sum_probs=150.0
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF 80 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~ 80 (231)
++.||+|++|+..+++.+..+++|.+.|++++|+|. ++..|+|++.|++|++||+.++.++..+..
T Consensus 551 ~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~--------------~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~ 616 (793)
T PLN00181 551 SNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSA--------------DPTLLASGSDDGSVKLWSINQGVSIGTIKT 616 (793)
T ss_pred EeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCC--------------CCCEEEEEcCCCEEEEEECCCCcEEEEEec
Confidence 367999999999999999999999999999999973 245689999999999999999988888776
Q ss_pred CCcceeEEEc-cCCCEEEE-EcCCeEEEEECCCcc-eEEeeec-cceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc-
Q psy6442 81 GAVPNSLEIS-RDGTTITV-THGSCVTFLDANSLE-LIKEHKV-PAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG- 155 (231)
Q Consensus 81 ~~~~~~v~~~-~~~~~~~~-~~~~~i~~~d~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~- 155 (231)
...+.++.|. +++..+++ +.++.|++||.+... .+..... ...+..+.+ . ++..+++++.|++|++||+..+
T Consensus 617 ~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f--~-~~~~lvs~s~D~~ikiWd~~~~~ 693 (793)
T PLN00181 617 KANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRF--V-DSSTLVSSSTDNTLKLWDLSMSI 693 (793)
T ss_pred CCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEE--e-CCCEEEEEECCCEEEEEeCCCCc
Confidence 6778888885 45776665 457899999987654 2333322 234444444 3 5668999999999999998642
Q ss_pred -----ceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeee
Q psy6442 156 -----AEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLW 203 (231)
Q Consensus 156 -----~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~ 203 (231)
..+.++.+|...+.+++|+|++.+|++|+.|++|+||+....++...+
T Consensus 694 ~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~ 746 (793)
T PLN00181 694 SGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSY 746 (793)
T ss_pred cccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEE
Confidence 467889999999999999999999999999999999998776654333
No 34
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.92 E-value=2.4e-22 Score=159.48 Aligned_cols=216 Identities=28% Similarity=0.432 Sum_probs=173.3
Q ss_pred CcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccc---------------------------cCCCE
Q psy6442 2 CVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQA---------------------------KNNTR 54 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~---------------------------~~~~~ 54 (231)
+.||.+++|+..+++.+..+.+|...+..+.|.++++.+++++.+..+ .++..
T Consensus 28 ~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 107 (289)
T cd00200 28 SGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRI 107 (289)
T ss_pred ecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCE
Confidence 468999999999999999999999999999999999888887654321 13467
Q ss_pred EEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCCEEEEEc-CCeEEEEECCCcceEEeeeccc-eeEEEEEEe
Q psy6442 55 LISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVTH-GSCVTFLDANSLELIKEHKVPA-QVHSASLLL 131 (231)
Q Consensus 55 l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~-~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~ 131 (231)
+++++.|+.+++||+.+++....+. +...+.++.++|++..++++. ++.+.+||....+....+..+. .+..+. +
T Consensus 108 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~--~ 185 (289)
T cd00200 108 LSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVA--F 185 (289)
T ss_pred EEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCccccceEE--E
Confidence 7777779999999999877776665 455789999999988888776 8899999998777666655433 444444 4
Q ss_pred cCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCccc
Q psy6442 132 NSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLN 211 (231)
Q Consensus 132 ~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~ 211 (231)
++++..+++++.++.+++||...++.+..+..|..++.+++|+|++.++++++.|+.|++|++.+++....++.. +...
T Consensus 186 ~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~-~~~i 264 (289)
T cd00200 186 SPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGH-TNSV 264 (289)
T ss_pred CCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEcccc-CCcE
Confidence 788888888888999999999988888888889999999999999999999999999999999988887776632 2233
Q ss_pred CCCCCCccc
Q psy6442 212 NSLGLDSSG 220 (231)
Q Consensus 212 ~~~~~~~~~ 220 (231)
..+.+.+++
T Consensus 265 ~~~~~~~~~ 273 (289)
T cd00200 265 TSLAWSPDG 273 (289)
T ss_pred EEEEECCCC
Confidence 444555543
No 35
>KOG0285|consensus
Probab=99.92 E-value=6.7e-24 Score=167.47 Aligned_cols=203 Identities=21% Similarity=0.315 Sum_probs=170.0
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE- 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~- 79 (231)
++.|+++.+||..+|++..+|.||-..|..+++++. ..+|.+|+.|++||-||+...+.++...
T Consensus 169 gs~DrtikIwDlatg~LkltltGhi~~vr~vavS~r---------------HpYlFs~gedk~VKCwDLe~nkvIR~YhG 233 (460)
T KOG0285|consen 169 GSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKR---------------HPYLFSAGEDKQVKCWDLEYNKVIRHYHG 233 (460)
T ss_pred cCCCceeEEEEcccCeEEEeecchhheeeeeeeccc---------------CceEEEecCCCeeEEEechhhhhHHHhcc
Confidence 588999999999999999999999999999999975 4568999999999999999998887765
Q ss_pred eCCcceeEEEccCCCEEEE-EcCCeEEEEECCCcceEEeeecc-ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcce
Q psy6442 80 FGAVPNSLEISRDGTTITV-THGSCVTFLDANSLELIKEHKVP-AQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAE 157 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~ 157 (231)
+-..++++...|.-..++. +.|..+++||+++...+.....+ .++.. +.+.+....+++|+.|.+|++||+..++.
T Consensus 234 HlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~--V~~~~~dpqvit~S~D~tvrlWDl~agkt 311 (460)
T KOG0285|consen 234 HLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVAS--VMCQPTDPQVITGSHDSTVRLWDLRAGKT 311 (460)
T ss_pred ccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCccee--EEeecCCCceEEecCCceEEEeeeccCce
Confidence 4567899999998776655 45789999999998877766543 34443 33466677799999999999999999999
Q ss_pred eeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCccccc
Q psy6442 158 IESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGHL 222 (231)
Q Consensus 158 ~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (231)
..++..|+..|.+++.+|....+||++.|. |+-|++-.|...+.+.+ .++..|.++.-++|.|
T Consensus 312 ~~tlt~hkksvral~lhP~e~~fASas~dn-ik~w~~p~g~f~~nlsg-h~~iintl~~nsD~v~ 374 (460)
T KOG0285|consen 312 MITLTHHKKSVRALCLHPKENLFASASPDN-IKQWKLPEGEFLQNLSG-HNAIINTLSVNSDGVL 374 (460)
T ss_pred eEeeecccceeeEEecCCchhhhhccCCcc-ceeccCCccchhhcccc-ccceeeeeeeccCceE
Confidence 999999999999999999999999999987 99999988887766544 4556677777666544
No 36
>KOG1446|consensus
Probab=99.92 E-value=1.5e-22 Score=157.32 Aligned_cols=187 Identities=21% Similarity=0.358 Sum_probs=155.0
Q ss_pred cCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCC
Q psy6442 3 VDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGA 82 (231)
Q Consensus 3 ~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~ 82 (231)
.|.++|+.+..+.+.++.|.||...|.++..+|. +..++|+|.|++||+||++..+|...+....
T Consensus 78 ~d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~---------------~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~ 142 (311)
T KOG1446|consen 78 EDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPK---------------DDTFLSSSLDKTVRLWDLRVKKCQGLLNLSG 142 (311)
T ss_pred CCCceEEEEeecCceEEEcCCCCceEEEEEecCC---------------CCeEEecccCCeEEeeEecCCCCceEEecCC
Confidence 3789999999999999999999999999999996 3568999999999999999988877766543
Q ss_pred cceeEEEccCCCEEEEEcCC-eEEEEECCCc--ceEEeeecc--ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcce
Q psy6442 83 VPNSLEISRDGTTITVTHGS-CVTFLDANSL--ELIKEHKVP--AQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAE 157 (231)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~~~-~i~~~d~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~ 157 (231)
...+++.|+|..++++.++ .|.++|.+.. .+..++..+ ....-..+.++++|+.++.....+.+++.|--+|..
T Consensus 143 -~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~ 221 (311)
T KOG1446|consen 143 -RPIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTV 221 (311)
T ss_pred -CcceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcE
Confidence 3467899999998887655 9999998864 233444332 122222344589999999999999999999999999
Q ss_pred eeeccCCCCCe---eEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeec
Q psy6442 158 IESFKGHFGPI---HCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKC 205 (231)
Q Consensus 158 ~~~~~~h~~~V---~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~ 205 (231)
++++.++...- .+..|+||++++.+++.||+|.+|++++|+.+..|++
T Consensus 222 ~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~ 272 (311)
T KOG1446|consen 222 KSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRG 272 (311)
T ss_pred eeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecC
Confidence 99988776443 5789999999999999999999999999999999986
No 37
>PTZ00421 coronin; Provisional
Probab=99.92 E-value=1.8e-22 Score=173.26 Aligned_cols=191 Identities=19% Similarity=0.206 Sum_probs=144.0
Q ss_pred CCcCCCceeeeccCC-------CeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCC
Q psy6442 1 MCVDGKPMLRQGDTG-------DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASA 73 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g-------~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~ 73 (231)
+|.|++|++|+..++ +.+.+|.+|...|.+++|+|++ +..|+|++.|++|+|||+.+++
T Consensus 94 gS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~--------------~~iLaSgs~DgtVrIWDl~tg~ 159 (493)
T PTZ00421 94 ASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSA--------------MNVLASAGADMVVNVWDVERGK 159 (493)
T ss_pred EeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCC--------------CCEEEEEeCCCEEEEEECCCCe
Confidence 478999999998665 3577899999999999999963 3468999999999999999988
Q ss_pred ceEEEE-eCCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEe----cCCCeE
Q psy6442 74 EVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCG----GEDLKM 147 (231)
Q Consensus 74 ~~~~~~-~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~d~~i 147 (231)
....+. +...+.+++|+|++..++.+ .++.+++||.++.+.+.....+.........+.++...++++ +.|+.|
T Consensus 160 ~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~V 239 (493)
T PTZ00421 160 AVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQI 239 (493)
T ss_pred EEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeE
Confidence 777765 45679999999999987665 578999999998877766554332211122234554455543 357899
Q ss_pred EEEeCCCcc-eeeeccCC-CCCeeEEEEcCCCCEEEEee-CCCcEEEEeCCCCCeeeeeec
Q psy6442 148 YKFDYSTGA-EIESFKGH-FGPIHCVKFSPDGELYASGS-EDGTLRLWQTNVGKTYGLWKC 205 (231)
Q Consensus 148 ~~~d~~~~~-~~~~~~~h-~~~V~~v~~spd~~~laS~s-~d~~v~iwd~~~~~~~~~~~~ 205 (231)
++||++... .+.....+ ...+....|+|++.+|++++ .|++|++||+.+++.+...+.
T Consensus 240 klWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~ 300 (493)
T PTZ00421 240 MLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSY 300 (493)
T ss_pred EEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeec
Confidence 999997644 33433333 34566678999999998887 599999999999988766543
No 38
>KOG0284|consensus
Probab=99.92 E-value=4e-24 Score=170.99 Aligned_cols=219 Identities=21% Similarity=0.329 Sum_probs=171.8
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEecccccccc---------------------------CCC
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK---------------------------NNT 53 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~---------------------------~~~ 53 (231)
++..|..-||++.+-.+--.+..|..+|.++.|++++..++||+.+..+. ++.
T Consensus 114 gs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~~~ahh~eaIRdlafSpnDs 193 (464)
T KOG0284|consen 114 GSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVKIIQAHHAEAIRDLAFSPNDS 193 (464)
T ss_pred ecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhHHhhHhhhhhhheeccCCCCc
Confidence 46678889999755555445679999999999999999999997754321 677
Q ss_pred EEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCCEEEE-EcCCeEEEEECCCcceEEeee-ccceeEEEEEE
Q psy6442 54 RLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITV-THGSCVTFLDANSLELIKEHK-VPAQVHSASLL 130 (231)
Q Consensus 54 ~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~ 130 (231)
.++|||.|++|+|||....+..+.+. ++..+.++.|+|....++. +.++.+++||.++..++.+.- ....+....+
T Consensus 194 kF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f- 272 (464)
T KOG0284|consen 194 KFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKF- 272 (464)
T ss_pred eeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEE-
Confidence 89999999999999998777666654 5678999999999777665 457899999999998876643 2334554444
Q ss_pred ecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCC-CCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCc
Q psy6442 131 LNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPD-GELYASGSEDGTLRLWQTNVGKTYGLWKCIEGG 209 (231)
Q Consensus 131 ~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd-~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~ 209 (231)
++++..|++++.|..++++|.++.+++.++.+|+..|+++.|+|- ..+|.+++.||.|..|.+...++......+-..
T Consensus 273 -~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~ 351 (464)
T KOG0284|consen 273 -NPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDG 351 (464)
T ss_pred -cCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEeccccccccCCCccccc
Confidence 888899999999999999999988999999999999999999995 579999999999999999866665444333333
Q ss_pred ccCCCCCCcccc
Q psy6442 210 LNNSLGLDSSGH 221 (231)
Q Consensus 210 ~~~~~~~~~~~~ 221 (231)
..-++++-+=||
T Consensus 352 ~iwsl~~hPlGh 363 (464)
T KOG0284|consen 352 EIWSLAYHPLGH 363 (464)
T ss_pred ceeeeeccccce
Confidence 333333333444
No 39
>KOG1407|consensus
Probab=99.92 E-value=6.1e-23 Score=156.02 Aligned_cols=208 Identities=25% Similarity=0.394 Sum_probs=164.6
Q ss_pred eeeecccccEEEEEECCCCceeEecccccccc------------------------------CCCEEEEEeCCCCEEEEe
Q psy6442 19 GTFEGHKGCVWGVDINKDASKAASGAADFQAK------------------------------NNTRLISCAEDKTVRLWD 68 (231)
Q Consensus 19 ~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~------------------------------~~~~l~s~s~D~ti~iwd 68 (231)
+.+++|.+.|.++.|+.+|.++++++.|..+. ....+++++.|++|++||
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd 93 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWD 93 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEE
Confidence 55789999999999999999999998875432 567899999999999999
Q ss_pred CCCCCceEEEEeCCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeE
Q psy6442 69 VSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKM 147 (231)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i 147 (231)
++.+++...+.....-..+.|+|++.++++. .+..|.++|.++.+.....+....++.+++. .+ +.++.....-|+|
T Consensus 94 ~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~-~~-nd~Fflt~GlG~v 171 (313)
T KOG1407|consen 94 IRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWN-NS-NDLFFLTNGLGCV 171 (313)
T ss_pred eccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeec-CC-CCEEEEecCCceE
Confidence 9999999999887777888999999988775 4678999999988888777777777777774 33 4444444556788
Q ss_pred EEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCC---Ce-----eeeeeccCCcccCCCCCCcc
Q psy6442 148 YKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVG---KT-----YGLWKCIEGGLNNSLGLDSS 219 (231)
Q Consensus 148 ~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~---~~-----~~~~~~~~~~~~~~~~~~~~ 219 (231)
.+....+-+++.++++|.....|++|+|+|++||+|+.|..+.|||+..- +. +-.-+-.|....-.|+..+-
T Consensus 172 ~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSE 251 (313)
T KOG1407|consen 172 EILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASE 251 (313)
T ss_pred EEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCc
Confidence 77777777888999999999999999999999999999999999997422 11 22234445555556666666
Q ss_pred ccccceeee
Q psy6442 220 GHLNNVHEV 228 (231)
Q Consensus 220 ~~~~~~~~~ 228 (231)
+|+-++-|+
T Consensus 252 Dh~IDIA~v 260 (313)
T KOG1407|consen 252 DHFIDIAEV 260 (313)
T ss_pred cceEEeEec
Confidence 666555543
No 40
>KOG0296|consensus
Probab=99.91 E-value=6.4e-23 Score=162.10 Aligned_cols=192 Identities=18% Similarity=0.244 Sum_probs=152.2
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEecccccccc------------------------------
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK------------------------------ 50 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~------------------------------ 50 (231)
||.|....||+..+|+++..+.||++.|.++.|+.+|.+++||+++..+.
T Consensus 82 GGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~ 161 (399)
T KOG0296|consen 82 GGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAH 161 (399)
T ss_pred cCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEeccccc
Confidence 57788999999999999999999999999999999999999998763321
Q ss_pred ---------------------------------------CCCEEEEEeCCCCEEEEeCCCCCceEEEEe------C----
Q psy6442 51 ---------------------------------------NNTRLISCAEDKTVRLWDVSASAEVQKLEF------G---- 81 (231)
Q Consensus 51 ---------------------------------------~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~------~---- 81 (231)
++++++++..||+|++|+..++.++..+.. +
T Consensus 162 illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~ 241 (399)
T KOG0296|consen 162 ILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISL 241 (399)
T ss_pred EEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCcccc
Confidence 789999999999999999998877655541 0
Q ss_pred ------------------------------------------CcceeEEEccCCCE---EEE-EcCCeEEEEECCCcceE
Q psy6442 82 ------------------------------------------AVPNSLEISRDGTT---ITV-THGSCVTFLDANSLELI 115 (231)
Q Consensus 82 ------------------------------------------~~~~~v~~~~~~~~---~~~-~~~~~i~~~d~~~~~~~ 115 (231)
....++.+.|.... .++ +-+++|.+||.......
T Consensus 242 ~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R 321 (399)
T KOG0296|consen 242 NLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLR 321 (399)
T ss_pred ccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhh
Confidence 00011111111111 111 23678899998776666
Q ss_pred EeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCC
Q psy6442 116 KEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~ 195 (231)
.....+..+..+.| .+ ...++++..++.|+.||.++|+++.++.||..+|.+++++|+.++++|+|.|++.+||+..
T Consensus 322 ~~c~he~~V~~l~w--~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 322 HICEHEDGVTKLKW--LN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred eeccCCCceEEEEE--cC-cchheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 66666666666665 44 5668899999999999999999999999999999999999999999999999999999864
No 41
>KOG0292|consensus
Probab=99.91 E-value=4.4e-23 Score=178.42 Aligned_cols=198 Identities=22% Similarity=0.414 Sum_probs=161.9
Q ss_pred CCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEecccccccc---------------------------CCCEEE
Q psy6442 4 DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK---------------------------NNTRLI 56 (231)
Q Consensus 4 d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~---------------------------~~~~l~ 56 (231)
-|.++|||=.-|.+|..|.+|.|+|..++|+|..-.+.||+.|+.+. .-..++
T Consensus 30 sG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIl 109 (1202)
T KOG0292|consen 30 SGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWIL 109 (1202)
T ss_pred CceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEE
Confidence 47899999988999999999999999999999999999999986553 446799
Q ss_pred EEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCC-EEEEEcCCeEEEEECCCcceEEe-----------------
Q psy6442 57 SCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGT-TITVTHGSCVTFLDANSLELIKE----------------- 117 (231)
Q Consensus 57 s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~-~~~~~~~~~i~~~d~~~~~~~~~----------------- 117 (231)
|||.|.|||||+..+++|+..+. +.-.+++.+|+|... .+.++-|.++++||+........
T Consensus 110 SASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~d 189 (1202)
T KOG0292|consen 110 SASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSD 189 (1202)
T ss_pred EccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchh
Confidence 99999999999999999998876 456789999999554 45567789999999753211000
Q ss_pred ----------e--ec-cceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcc--eeeeccCCCCCeeEEEEcCCCCEEEE
Q psy6442 118 ----------H--KV-PAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA--EIESFKGHFGPIHCVKFSPDGELYAS 182 (231)
Q Consensus 118 ----------~--~~-~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~--~~~~~~~h~~~V~~v~~spd~~~laS 182 (231)
+ +. .-.++-++ ++|.-+++++|++|..|++|.+...+ ++.++.||...|.++-|+|...+++|
T Consensus 190 Lfg~~DaVVK~VLEGHDRGVNwaA--fhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlS 267 (1202)
T KOG0292|consen 190 LFGQTDAVVKHVLEGHDRGVNWAA--FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILS 267 (1202)
T ss_pred hcCCcCeeeeeeecccccccceEE--ecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEe
Confidence 0 00 01223333 47888899999999999999886543 57888999999999999999999999
Q ss_pred eeCCCcEEEEeCCCCCeeeee
Q psy6442 183 GSEDGTLRLWQTNVGKTYGLW 203 (231)
Q Consensus 183 ~s~d~~v~iwd~~~~~~~~~~ 203 (231)
.|+|++|||||....+..+.+
T Consensus 268 nsEDksirVwDm~kRt~v~tf 288 (1202)
T KOG0292|consen 268 NSEDKSIRVWDMTKRTSVQTF 288 (1202)
T ss_pred cCCCccEEEEecccccceeee
Confidence 999999999999988877765
No 42
>KOG0318|consensus
Probab=99.91 E-value=6e-22 Score=163.02 Aligned_cols=198 Identities=22% Similarity=0.393 Sum_probs=147.8
Q ss_pred CCcCCCceeeeccCCCeEeeee---cccccEEEEEECCCCceeEecccccccc---------------------------
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFE---GHKGCVWGVDINKDASKAASGAADFQAK--------------------------- 50 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~---gH~~~V~~~~~~~~~~~~~s~~~d~~~~--------------------------- 50 (231)
.+.||+++++|+.+|+.+..|. +|+|.|+++.|+||++++++.+.|...+
T Consensus 208 ~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~l 287 (603)
T KOG0318|consen 208 AGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCL 287 (603)
T ss_pred ecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEE
Confidence 3679999999999999999998 9999999999999999999998775432
Q ss_pred -------------------------------------------CCCEEEEEeCCCCEEEEeCCCCCc-------------
Q psy6442 51 -------------------------------------------NNTRLISCAEDKTVRLWDVSASAE------------- 74 (231)
Q Consensus 51 -------------------------------------------~~~~l~s~s~D~ti~iwd~~~~~~------------- 74 (231)
+++.|+||+.||.|.-|+..++..
T Consensus 288 Wqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~ 367 (603)
T KOG0318|consen 288 WQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIK 367 (603)
T ss_pred EeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEE
Confidence 667889999999999998754311
Q ss_pred ------------------eEEE-------------EeCC--------------------------------------cce
Q psy6442 75 ------------------VQKL-------------EFGA--------------------------------------VPN 85 (231)
Q Consensus 75 ------------------~~~~-------------~~~~--------------------------------------~~~ 85 (231)
++.+ +++. .+.
T Consensus 368 ~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s 447 (603)
T KOG0318|consen 368 GMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESS 447 (603)
T ss_pred EEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccc
Confidence 0000 1111 233
Q ss_pred eEEEccCCCEEEEE-cCCeEEEEECCCcceEEe---eeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCccee-ee
Q psy6442 86 SLEISRDGTTITVT-HGSCVTFLDANSLELIKE---HKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEI-ES 160 (231)
Q Consensus 86 ~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~-~~ 160 (231)
+++++|++..++++ .+++++++.+.......+ .+...++..++ .+|++.+|+++...+.+.+||..+++.. ..
T Consensus 448 ~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~va--ySpd~~yla~~Da~rkvv~yd~~s~~~~~~~ 525 (603)
T KOG0318|consen 448 AVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVA--YSPDGAYLAAGDASRKVVLYDVASREVKTNR 525 (603)
T ss_pred eEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEE--ECCCCcEEEEeccCCcEEEEEcccCceecce
Confidence 44556666665554 356777777665443222 22334454444 4999999999999999999999887753 22
Q ss_pred ccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCee
Q psy6442 161 FKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 161 ~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~ 200 (231)
+.-|++.|++|+|+|+..++||||.|-+|.||++......
T Consensus 526 w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~ 565 (603)
T KOG0318|consen 526 WAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKH 565 (603)
T ss_pred eeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhh
Confidence 3349999999999999999999999999999998765543
No 43
>PTZ00420 coronin; Provisional
Probab=99.90 E-value=1.5e-21 Score=168.86 Aligned_cols=184 Identities=17% Similarity=0.231 Sum_probs=140.1
Q ss_pred CCcCCCceeeeccCCC--------eEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCC
Q psy6442 1 MCVDGKPMLRQGDTGD--------WIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSAS 72 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~--------~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~ 72 (231)
+|.||+|++|+..++. .+..+.+|.+.|.++.|+|++.. .|+|++.|++|+|||++++
T Consensus 93 gS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~--------------iLaSgS~DgtIrIWDl~tg 158 (568)
T PTZ00420 93 GSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYY--------------IMCSSGFDSFVNIWDIENE 158 (568)
T ss_pred EeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCe--------------EEEEEeCCCeEEEEECCCC
Confidence 4789999999987542 35578999999999999997532 4689999999999999998
Q ss_pred CceEEEEeCCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeeccce-eEEEEEE---ecCCCCEEEEecCCC--
Q psy6442 73 AEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVPAQ-VHSASLL---LNSERPIFVCGGEDL-- 145 (231)
Q Consensus 73 ~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~g~~d~-- 145 (231)
+....+.+...+.+++|+|++..++++ .++.+++||.++...+..+..+.. .....+. +++++..+++++.+.
T Consensus 159 ~~~~~i~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~ 238 (568)
T PTZ00420 159 KRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNN 238 (568)
T ss_pred cEEEEEecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCC
Confidence 877777777789999999999988765 478999999998887766654332 1111221 246777777766653
Q ss_pred --eEEEEeCCC-cceeeec--cCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCC
Q psy6442 146 --KMYKFDYST-GAEIESF--KGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 146 --~i~~~d~~~-~~~~~~~--~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~ 198 (231)
+|++||++. ...+..+ ..+.+.+......+++.++++|+.|++|++|++..+.
T Consensus 239 ~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~ 296 (568)
T PTZ00420 239 MREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGS 296 (568)
T ss_pred ccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCc
Confidence 799999984 4555543 3344555444556678999999999999999998774
No 44
>KOG0316|consensus
Probab=99.90 E-value=2.5e-22 Score=150.79 Aligned_cols=191 Identities=23% Similarity=0.268 Sum_probs=154.8
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEecccccccc---------------------------CCC
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK---------------------------NNT 53 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~---------------------------~~~ 53 (231)
|+.|..|.+||.+||+.++.|+||.+.|..+.|+.+...+++|+.|-.++ ++.
T Consensus 77 ~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~h 156 (307)
T KOG0316|consen 77 CGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEH 156 (307)
T ss_pred CCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEeccc
Confidence 57899999999999999999999999999999999999999999875443 567
Q ss_pred EEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeeccc-eeEEEEEEe
Q psy6442 54 RLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVPA-QVHSASLLL 131 (231)
Q Consensus 54 ~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~ 131 (231)
.++++|.||++|.||++.+.... -.++.+++++++++|++..+++ .++++++.|..+++.++.++... .........
T Consensus 157 eIvaGS~DGtvRtydiR~G~l~s-Dy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l 235 (307)
T KOG0316|consen 157 EIVAGSVDGTVRTYDIRKGTLSS-DYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCL 235 (307)
T ss_pred EEEeeccCCcEEEEEeecceeeh-hhcCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeee
Confidence 89999999999999999886532 2357889999999999976665 58899999999999887766532 111111122
Q ss_pred cCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCC-eeEEEEcCCCCEEEEeeCCCcEEEEe
Q psy6442 132 NSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGP-IHCVKFSPDGELYASGSEDGTLRLWQ 193 (231)
Q Consensus 132 ~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~-V~~v~~spd~~~laS~s~d~~v~iwd 193 (231)
+.....+++|++||.+++||+.....+..+..|... |.+++++|.-..|.++...+ +-.|-
T Consensus 236 ~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~~~-~~~~~ 297 (307)
T KOG0316|consen 236 NQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITATGHG-DLFWY 297 (307)
T ss_pred cccceeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEecCCc-eecee
Confidence 555667899999999999999999888888888777 89999999877777776544 44443
No 45
>KOG1332|consensus
Probab=99.90 E-value=5.9e-23 Score=154.80 Aligned_cols=210 Identities=23% Similarity=0.307 Sum_probs=148.3
Q ss_pred CCcCCCceeeecc-CC--CeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEE
Q psy6442 1 MCVDGKPMLRQGD-TG--DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQK 77 (231)
Q Consensus 1 ~~~d~~~~~~~~~-~g--~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~ 77 (231)
||.|++|+++... .| +++.+|.||+|+||.++|..- .-+..|+|||+||.|.||....++-.+.
T Consensus 29 csSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahP-------------k~G~iLAScsYDgkVIiWke~~g~w~k~ 95 (299)
T KOG1332|consen 29 CSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHP-------------KFGTILASCSYDGKVIIWKEENGRWTKA 95 (299)
T ss_pred ecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeeccc-------------ccCcEeeEeecCceEEEEecCCCchhhh
Confidence 5789999999984 33 579999999999999999742 2367899999999999999888754333
Q ss_pred EE---eCCcceeEEEccCCC--EEE-EEcCCeEEEEECCCc--ceEEeee--ccceeEEEEEEecC------------CC
Q psy6442 78 LE---FGAVPNSLEISRDGT--TIT-VTHGSCVTFLDANSL--ELIKEHK--VPAQVHSASLLLNS------------ER 135 (231)
Q Consensus 78 ~~---~~~~~~~v~~~~~~~--~~~-~~~~~~i~~~d~~~~--~~~~~~~--~~~~~~~~~~~~~~------------~~ 135 (231)
.+ +...+++++|.|.+. .|+ ++.|+.|.+++.+.. .....+. .+..++++++.+.. .-
T Consensus 96 ~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~ 175 (299)
T KOG1332|consen 96 YEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKV 175 (299)
T ss_pred hhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCccccc
Confidence 32 467899999999876 333 356888888765443 1122211 12345555554321 11
Q ss_pred CEEEEecCCCeEEEEeCCCcc--eeeeccCCCCCeeEEEEcCCC----CEEEEeeCCCcEEEEeCCCCCeeeeeecc---
Q psy6442 136 PIFVCGGEDLKMYKFDYSTGA--EIESFKGHFGPIHCVKFSPDG----ELYASGSEDGTLRLWQTNVGKTYGLWKCI--- 206 (231)
Q Consensus 136 ~~~~~g~~d~~i~~~d~~~~~--~~~~~~~h~~~V~~v~~spd~----~~laS~s~d~~v~iwd~~~~~~~~~~~~~--- 206 (231)
..|++|+.|..+++|...+++ +-++|++|++-|++++|.|.- ..+||||+||+|.||..+ +....|+..
T Consensus 176 krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~--~e~e~wk~tll~ 253 (299)
T KOG1332|consen 176 KRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKD--EEYEPWKKTLLE 253 (299)
T ss_pred ceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEec--CccCcccccccc
Confidence 458999999999999987653 345689999999999999973 589999999999999876 333334322
Q ss_pred -CCcccCCCCCCccccccce
Q psy6442 207 -EGGLNNSLGLDSSGHLNNV 225 (231)
Q Consensus 207 -~~~~~~~~~~~~~~~~~~~ 225 (231)
|+-..-.++++.+|-.|-|
T Consensus 254 ~f~~~~w~vSWS~sGn~LaV 273 (299)
T KOG1332|consen 254 EFPDVVWRVSWSLSGNILAV 273 (299)
T ss_pred cCCcceEEEEEeccccEEEE
Confidence 3333444556665555443
No 46
>KOG0282|consensus
Probab=99.90 E-value=2.3e-23 Score=169.68 Aligned_cols=191 Identities=18% Similarity=0.345 Sum_probs=162.8
Q ss_pred CeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCC-CCceEEEE-eCCcceeEEEccCC
Q psy6442 16 DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSA-SAEVQKLE-FGAVPNSLEISRDG 93 (231)
Q Consensus 16 ~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~-~~~~~~~~-~~~~~~~v~~~~~~ 93 (231)
+++++|.||+..|.++.|.|.. +..|+|++.|+.|+||++.. +++++++. +...+.+++|++++
T Consensus 205 k~~~~~~gH~kgvsai~~fp~~--------------~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g 270 (503)
T KOG0282|consen 205 KLSHNLSGHTKGVSAIQWFPKK--------------GHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCG 270 (503)
T ss_pred hheeeccCCccccchhhhccce--------------eeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccC
Confidence 5688999999999999999843 34589999999999999987 78887765 56789999999999
Q ss_pred CE-EEEEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCC-CEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEE
Q psy6442 94 TT-ITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSER-PIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCV 171 (231)
Q Consensus 94 ~~-~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v 171 (231)
.. +.++.+..+++||..++.++..+.......+..+ +|++ ..+++|+.|++|+.||.++++.++++..|-++|.++
T Consensus 271 ~~fLS~sfD~~lKlwDtETG~~~~~f~~~~~~~cvkf--~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i 348 (503)
T KOG0282|consen 271 TSFLSASFDRFLKLWDTETGQVLSRFHLDKVPTCVKF--HPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDI 348 (503)
T ss_pred CeeeeeecceeeeeeccccceEEEEEecCCCceeeec--CCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeee
Confidence 85 4567899999999999999998887665555554 6666 789999999999999999999999999999999999
Q ss_pred EEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCccccc
Q psy6442 172 KFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGHL 222 (231)
Q Consensus 172 ~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (231)
.|-|+|++++|.++|++++||+.+.+.+++.-....-..+-.+..-+++..
T Consensus 349 ~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~ 399 (503)
T KOG0282|consen 349 TFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKW 399 (503)
T ss_pred EEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCe
Confidence 999999999999999999999999998887666666666666666666553
No 47
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.90 E-value=4.1e-21 Score=152.33 Aligned_cols=191 Identities=26% Similarity=0.424 Sum_probs=156.4
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccc---------------------------cCCC
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQA---------------------------KNNT 53 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~---------------------------~~~~ 53 (231)
++.||.+++|+..+++.+..+.+|.+.|.++.|+++++.+++++.+..+ .++.
T Consensus 69 ~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 148 (289)
T cd00200 69 GSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGT 148 (289)
T ss_pred EcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCC
Confidence 3569999999999889999999999999999999998888877633211 1356
Q ss_pred EEEEEeCCCCEEEEeCCCCCceEEEEeC-CcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeec-cceeEEEEEE
Q psy6442 54 RLISCAEDKTVRLWDVSASAEVQKLEFG-AVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKV-PAQVHSASLL 130 (231)
Q Consensus 54 ~l~s~s~D~ti~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~ 130 (231)
.+++++.|+.|++||+..++....+... ..+.++.++|++..++++ .++.+.+||............ ...+..+.+
T Consensus 149 ~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~- 227 (289)
T cd00200 149 FVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAF- 227 (289)
T ss_pred EEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEE-
Confidence 7777777999999999988777666543 478999999999766554 478999999988776666532 334544444
Q ss_pred ecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEe
Q psy6442 131 LNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQ 193 (231)
Q Consensus 131 ~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd 193 (231)
++++.++++++.++.+++|+..++..+..+.+|..+|.+++|+|++.+|++++.|+.|++|+
T Consensus 228 -~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 228 -SPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred -cCCCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 77788888888899999999998888888889999999999999999999999999999996
No 48
>KOG0645|consensus
Probab=99.90 E-value=4.3e-21 Score=146.63 Aligned_cols=176 Identities=20% Similarity=0.280 Sum_probs=142.2
Q ss_pred eEeeeecccccEEEEEECCC-CceeEecccccccc-------------------------------CCCEEEEEeCCCCE
Q psy6442 17 WIGTFEGHKGCVWGVDINKD-ASKAASGAADFQAK-------------------------------NNTRLISCAEDKTV 64 (231)
Q Consensus 17 ~i~~l~gH~~~V~~~~~~~~-~~~~~s~~~d~~~~-------------------------------~~~~l~s~s~D~ti 64 (231)
.++++++|.++||.++|+|. |..+++++.|..++ .+++|+++|.|.|+
T Consensus 6 ~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~ 85 (312)
T KOG0645|consen 6 LEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATV 85 (312)
T ss_pred eEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceE
Confidence 56789999999999999998 88899988775432 57889999999999
Q ss_pred EEEeCCCC--CceEEEE-eCCcceeEEEccCCCEEEE-EcCCeEEEEECCCc---ceEEeeecc-ceeEEEEEEecCCCC
Q psy6442 65 RLWDVSAS--AEVQKLE-FGAVPNSLEISRDGTTITV-THGSCVTFLDANSL---ELIKEHKVP-AQVHSASLLLNSERP 136 (231)
Q Consensus 65 ~iwd~~~~--~~~~~~~-~~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~ 136 (231)
-||.-..+ +++.+++ +...+.+++|+++|.+|+. +.+..+-+|..... ++......+ +.+.-+.+ +|...
T Consensus 86 ~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~W--HPt~d 163 (312)
T KOG0645|consen 86 VIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIW--HPTED 163 (312)
T ss_pred EEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEE--cCCcc
Confidence 99987644 5566665 4578999999999999876 46789999987632 333333322 23444444 88889
Q ss_pred EEEEecCCCeEEEEeCCC---cceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 137 IFVCGGEDLKMYKFDYST---GAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 137 ~~~~g~~d~~i~~~d~~~---~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
+|++++.|.+|++|.-.. -.+.+++.+|...|.+++|+|.|..|++|++|++|+||-.
T Consensus 164 lL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~ 224 (312)
T KOG0645|consen 164 LLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRL 224 (312)
T ss_pred eeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeee
Confidence 999999999999997652 2468899999999999999999999999999999999994
No 49
>KOG0265|consensus
Probab=99.90 E-value=3e-22 Score=154.83 Aligned_cols=193 Identities=21% Similarity=0.304 Sum_probs=153.8
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCC-ceeEecccccccc--------------------------CCC
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDA-SKAASGAADFQAK--------------------------NNT 53 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~-~~~~s~~~d~~~~--------------------------~~~ 53 (231)
+|.|.+|+.||..+|+.++.+++|.+.|.+++.+.-| .++.+++.|.+.+ ...
T Consensus 108 ~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~ 187 (338)
T KOG0265|consen 108 CGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSD 187 (338)
T ss_pred ecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEeccccc
Confidence 5789999999999999999999999999999866655 3444555543321 446
Q ss_pred EEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCCEEEE-EcCCeEEEEECCCcce----EEeeec---ccee
Q psy6442 54 RLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITV-THGSCVTFLDANSLEL----IKEHKV---PAQV 124 (231)
Q Consensus 54 ~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~~----~~~~~~---~~~~ 124 (231)
.+.+|+-|+.||+||++.+..+..+. +...++.++.+|++..+.. +.+.++++||.+.... +..+.. ....
T Consensus 188 qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfek 267 (338)
T KOG0265|consen 188 QVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEK 267 (338)
T ss_pred ceeeccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhh
Confidence 67888888888888888877776665 4578899999999987654 5688999999876543 333322 2233
Q ss_pred EEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEe
Q psy6442 125 HSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQ 193 (231)
Q Consensus 125 ~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd 193 (231)
+.+...++|++..+.+|+.|..+++||......+..++||.+.|++++|+|...+|.+|+.|++|.+=.
T Consensus 268 nlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~lge 336 (338)
T KOG0265|consen 268 NLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLGE 336 (338)
T ss_pred hcceeeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEeec
Confidence 444555689999999999999999999988889999999999999999999999999999999998744
No 50
>KOG0284|consensus
Probab=99.89 E-value=4.3e-23 Score=165.15 Aligned_cols=178 Identities=19% Similarity=0.296 Sum_probs=150.0
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE- 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~- 79 (231)
||+||++++|+....+.-+.|+||.--|.+++|+|. ...|+|+|.|..||+||.+++.|+.+++
T Consensus 198 ~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~---------------kgLiasgskDnlVKlWDprSg~cl~tlh~ 262 (464)
T KOG0284|consen 198 CSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPT---------------KGLIASGSKDNLVKLWDPRSGSCLATLHG 262 (464)
T ss_pred ecCCCeEEEEeccCCchhheeccCCCCcceeccCCc---------------cceeEEccCCceeEeecCCCcchhhhhhh
Confidence 689999999999888888889999999999999997 3458999999999999999999998876
Q ss_pred eCCcceeEEEccCCCEEEE-EcCCeEEEEECCCcceEEeeecc-ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcce
Q psy6442 80 FGAVPNSLEISRDGTTITV-THGSCVTFLDANSLELIKEHKVP-AQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAE 157 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~ 157 (231)
++..|..+.|.|+++.++. +.|..++++|++..+.+..++.+ ..+....+. .-...++.+|+.|+.|..|.+...++
T Consensus 263 HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~Wh-P~~~~lftsgg~Dgsvvh~~v~~~~p 341 (464)
T KOG0284|consen 263 HKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWH-PLNESLFTSGGSDGSVVHWVVGLEEP 341 (464)
T ss_pred ccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccc-cccccceeeccCCCceEEEecccccc
Confidence 5678999999999987765 56778999999987777666643 345555552 22455789999999999999875555
Q ss_pred eeec-cCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 158 IESF-KGHFGPIHCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 158 ~~~~-~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
+..+ .+|...|++++|+|-|++||+|+.|+++|.|.-
T Consensus 342 ~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r 379 (464)
T KOG0284|consen 342 LGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTR 379 (464)
T ss_pred ccCCCcccccceeeeeccccceeEeecCCCcceeeecc
Confidence 5444 689999999999999999999999999999973
No 51
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.89 E-value=5.3e-21 Score=174.42 Aligned_cols=192 Identities=19% Similarity=0.264 Sum_probs=149.4
Q ss_pred CCCceeeeccCCCeEee-----eecccccEEEEEECCCCceeEeccccccc-----------------------------
Q psy6442 4 DGKPMLRQGDTGDWIGT-----FEGHKGCVWGVDINKDASKAASGAADFQA----------------------------- 49 (231)
Q Consensus 4 d~~~~~~~~~~g~~i~~-----l~gH~~~V~~~~~~~~~~~~~s~~~d~~~----------------------------- 49 (231)
+|-+++|+..+-+.... +..|.+.|++++|+|+++.+++++.|..+
T Consensus 457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~ 536 (793)
T PLN00181 457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLS 536 (793)
T ss_pred hhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCcee
Confidence 44566666655444433 33599999999999999999998865321
Q ss_pred ------cCCCEEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEcc-CCCEEEE-EcCCeEEEEECCCcceEEeeec
Q psy6442 50 ------KNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISR-DGTTITV-THGSCVTFLDANSLELIKEHKV 120 (231)
Q Consensus 50 ------~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~-~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~ 120 (231)
..+.+|++++.|++|++||+.+++.+..+. +...+.+++|+| ++..++. +.++.+++||......+.....
T Consensus 537 ~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~ 616 (793)
T PLN00181 537 GICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT 616 (793)
T ss_pred eEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEec
Confidence 124679999999999999999887776664 567799999997 5666554 4578999999988777766655
Q ss_pred cceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcc-eeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCC
Q psy6442 121 PAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA-EIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~-~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~ 197 (231)
...+.++.+ .++++..+++|+.|+.|++||++... .+..+.+|...|.+++|. ++.+|++++.|++|+|||+..+
T Consensus 617 ~~~v~~v~~-~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~ 692 (793)
T PLN00181 617 KANICCVQF-PSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMS 692 (793)
T ss_pred CCCeEEEEE-eCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCC
Confidence 444443333 24578899999999999999998765 467788999999999997 6789999999999999999753
No 52
>PTZ00421 coronin; Provisional
Probab=99.89 E-value=5.5e-21 Score=164.18 Aligned_cols=174 Identities=17% Similarity=0.262 Sum_probs=132.5
Q ss_pred eeeccCCCeEe---eeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCC-------ceEEE
Q psy6442 9 LRQGDTGDWIG---TFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASA-------EVQKL 78 (231)
Q Consensus 9 ~~~~~~g~~i~---~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~-------~~~~~ 78 (231)
++..+.|+... .+.||++.|.+++|+|. ++..|+|+|.|++|++||+..+. .+..+
T Consensus 56 ~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~--------------d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L 121 (493)
T PTZ00421 56 LKHTDYGKLASNPPILLGQEGPIIDVAFNPF--------------DPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHL 121 (493)
T ss_pred eeccccccCCCCCceEeCCCCCEEEEEEcCC--------------CCCEEEEEeCCCEEEEEecCCCccccccCcceEEe
Confidence 33334454433 47899999999999982 14568999999999999997653 23333
Q ss_pred E-eCCcceeEEEccCCC-EEE-EEcCCeEEEEECCCcceEEeeecc-ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCC
Q psy6442 79 E-FGAVPNSLEISRDGT-TIT-VTHGSCVTFLDANSLELIKEHKVP-AQVHSASLLLNSERPIFVCGGEDLKMYKFDYST 154 (231)
Q Consensus 79 ~-~~~~~~~v~~~~~~~-~~~-~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~ 154 (231)
. +...+.+++|+|++. .++ .+.++.+++||..+...+..+... ..+..+.+ ++++.++++++.|++|++||+++
T Consensus 122 ~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~--spdG~lLatgs~Dg~IrIwD~rs 199 (493)
T PTZ00421 122 QGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEW--NLDGSLLCTTSKDKKLNIIDPRD 199 (493)
T ss_pred cCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEE--ECCCCEEEEecCCCEEEEEECCC
Confidence 2 456789999999864 444 456889999999887776665433 34555444 88999999999999999999999
Q ss_pred cceeeeccCCCCC-eeEEEEcCCCCEEEEee----CCCcEEEEeCCCCC
Q psy6442 155 GAEIESFKGHFGP-IHCVKFSPDGELYASGS----EDGTLRLWQTNVGK 198 (231)
Q Consensus 155 ~~~~~~~~~h~~~-V~~v~~spd~~~laS~s----~d~~v~iwd~~~~~ 198 (231)
++.+.++.+|.+. +..+.|.|++..+++++ .|++|+|||+++.+
T Consensus 200 g~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~ 248 (493)
T PTZ00421 200 GTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMA 248 (493)
T ss_pred CcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCC
Confidence 9988899999865 45678999887777654 58999999998654
No 53
>KOG0273|consensus
Probab=99.89 E-value=2.1e-21 Score=157.96 Aligned_cols=184 Identities=22% Similarity=0.334 Sum_probs=158.7
Q ss_pred ccEEEEEECCCCceeEecccccccc--------------------------CCCEEEEEeCCCCEEEEeCCCCCceEEEE
Q psy6442 26 GCVWGVDINKDASKAASGAADFQAK--------------------------NNTRLISCAEDKTVRLWDVSASAEVQKLE 79 (231)
Q Consensus 26 ~~V~~~~~~~~~~~~~s~~~d~~~~--------------------------~~~~l~s~s~D~ti~iwd~~~~~~~~~~~ 79 (231)
.-|.+++|+.+|..|++|..+..++ .+++|++++.|+++.+||..++.....++
T Consensus 236 kdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~ 315 (524)
T KOG0273|consen 236 KDVTSLDWNNDGTLLATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFE 315 (524)
T ss_pred CCcceEEecCCCCeEEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeee
Confidence 3599999999999999998876543 67899999999999999999999888888
Q ss_pred eCCcc-eeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeecc-ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcce
Q psy6442 80 FGAVP-NSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVP-AQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAE 157 (231)
Q Consensus 80 ~~~~~-~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~ 157 (231)
+...+ .+|.|-.+..++..+.+++|+++.+....++.++..+ .++.++.+ +|.+.+|+++++|+++++|.......
T Consensus 316 ~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~--n~tg~LLaS~SdD~TlkiWs~~~~~~ 393 (524)
T KOG0273|consen 316 FHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKW--NPTGSLLASCSDDGTLKIWSMGQSNS 393 (524)
T ss_pred eccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEE--CCCCceEEEecCCCeeEeeecCCCcc
Confidence 87766 7899999888887788899999998887777776553 46666555 89999999999999999999988888
Q ss_pred eeeccCCCCCeeEEEEcCCC---------CEEEEeeCCCcEEEEeCCCCCeeeee-eccCCccc
Q psy6442 158 IESFKGHFGPIHCVKFSPDG---------ELYASGSEDGTLRLWQTNVGKTYGLW-KCIEGGLN 211 (231)
Q Consensus 158 ~~~~~~h~~~V~~v~~spd~---------~~laS~s~d~~v~iwd~~~~~~~~~~-~~~~~~~~ 211 (231)
.+.|.+|...|..+.|+|+| ..+++++.|++|++||+..|++...+ +--+|.++
T Consensus 394 ~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVys 457 (524)
T KOG0273|consen 394 VHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYS 457 (524)
T ss_pred hhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEE
Confidence 99999999999999999974 48999999999999999999998877 44455544
No 54
>KOG0319|consensus
Probab=99.89 E-value=8e-22 Score=167.71 Aligned_cols=195 Identities=17% Similarity=0.229 Sum_probs=161.1
Q ss_pred CCcCCCceeeeccC--C--CeEeeeecccccEEEEEECCCC-ceeEeccccccc--------------------------
Q psy6442 1 MCVDGKPMLRQGDT--G--DWIGTFEGHKGCVWGVDINKDA-SKAASGAADFQA-------------------------- 49 (231)
Q Consensus 1 ~~~d~~~~~~~~~~--g--~~i~~l~gH~~~V~~~~~~~~~-~~~~s~~~d~~~-------------------------- 49 (231)
||.|.+|+||..+. + -+++...||+..|.++.++..+ ..+++++.|-..
T Consensus 383 ~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aH 462 (775)
T KOG0319|consen 383 GSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAH 462 (775)
T ss_pred ecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhh
Confidence 58999999996522 2 3466678999999999998765 566677665321
Q ss_pred ----------cCCCEEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCCEEEE-EcCCeEEEEECCCcceEEe
Q psy6442 50 ----------KNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITV-THGSCVTFLDANSLELIKE 117 (231)
Q Consensus 50 ----------~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~ 117 (231)
++++.++|||.|++.|||++.......++. +...+.+|.|+|..+.++. +.|.++++|.+.+..++++
T Consensus 463 dKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT 542 (775)
T KOG0319|consen 463 DKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKT 542 (775)
T ss_pred cccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeee
Confidence 177889999999999999999666666654 4567999999999887765 4678999999999999999
Q ss_pred eeccc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCC
Q psy6442 118 HKVPA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNV 196 (231)
Q Consensus 118 ~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~ 196 (231)
+..+. .+....+ -.++..+++++.||-|++|+.++++++.++.+|...|++++-+|...+++||+.|+.|.+|.-.+
T Consensus 543 ~eGH~~aVlra~F--~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD~T 620 (775)
T KOG0319|consen 543 FEGHTSAVLRASF--IRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKDVT 620 (775)
T ss_pred ecCccceeEeeee--eeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEeecCc
Confidence 88653 4444444 56788899999999999999999999999999999999999999999999999999999997544
Q ss_pred C
Q psy6442 197 G 197 (231)
Q Consensus 197 ~ 197 (231)
.
T Consensus 621 e 621 (775)
T KOG0319|consen 621 E 621 (775)
T ss_pred H
Confidence 3
No 55
>KOG0274|consensus
Probab=99.89 E-value=2e-21 Score=167.58 Aligned_cols=179 Identities=25% Similarity=0.381 Sum_probs=148.6
Q ss_pred CCcCCCceeeeccCCCeEee-eecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE
Q psy6442 1 MCVDGKPMLRQGDTGDWIGT-FEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~-l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~ 79 (231)
++.|.++++|+..+|..+.+ |.||.+.||++++... +..|++|+.|+|+|+||..++.|...+.
T Consensus 224 ~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~---------------~~~lvsgS~D~t~rvWd~~sg~C~~~l~ 288 (537)
T KOG0274|consen 224 GSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSG---------------GDKLVSGSTDKTERVWDCSTGECTHSLQ 288 (537)
T ss_pred cCCCceeEEeecccceEEEeeccCCCCCceeEEEecC---------------CCEEEEEecCCcEEeEecCCCcEEEEec
Confidence 36788899999999999998 9999999999998753 3468999999999999999999999887
Q ss_pred -eCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeee-ccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcce
Q psy6442 80 -FGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHK-VPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAE 157 (231)
Q Consensus 80 -~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~ 157 (231)
+...+..+...+. ..+..+.+.++++|+..+...++... ...++.++.. ++.++++|+.|++|++||..+++.
T Consensus 289 gh~stv~~~~~~~~-~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~----~~~~lvsgs~d~~v~VW~~~~~~c 363 (537)
T KOG0274|consen 289 GHTSSVRCLTIDPF-LLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQL----DEPLLVSGSYDGTVKVWDPRTGKC 363 (537)
T ss_pred CCCceEEEEEccCc-eEeeccCCceEEEEeccCcceEEEeccccccEEEEEe----cCCEEEEEecCceEEEEEhhhcee
Confidence 3444444443331 11222478899999999999988887 4446666554 377899999999999999999999
Q ss_pred eeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCC-Cee
Q psy6442 158 IESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVG-KTY 200 (231)
Q Consensus 158 ~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~-~~~ 200 (231)
++++.||...|.++.+.+. .++.+|+.|++|++||+.++ +-.
T Consensus 364 l~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~ 406 (537)
T KOG0274|consen 364 LKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCI 406 (537)
T ss_pred eeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhh
Confidence 9999999999999988776 79999999999999999998 433
No 56
>KOG0296|consensus
Probab=99.89 E-value=7.5e-21 Score=150.45 Aligned_cols=172 Identities=21% Similarity=0.359 Sum_probs=148.4
Q ss_pred CeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCC
Q psy6442 16 DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGT 94 (231)
Q Consensus 16 ~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~ 94 (231)
.-+.+|..|++.|+++..+|+ +..++|+|.|....+|++.++.....+. ++..+.++.|+.++.
T Consensus 55 dS~~tF~~H~~svFavsl~P~---------------~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~Fshdgt 119 (399)
T KOG0296|consen 55 DSLVTFDKHTDSVFAVSLHPN---------------NNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGT 119 (399)
T ss_pred cceeehhhcCCceEEEEeCCC---------------CceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCce
Confidence 457789999999999999995 4568999999999999999998766553 678999999999999
Q ss_pred EEEEEc-CCeEEEEECCCcceEEeeeccc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEE
Q psy6442 95 TITVTH-GSCVTFLDANSLELIKEHKVPA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVK 172 (231)
Q Consensus 95 ~~~~~~-~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~ 172 (231)
+++.+. ++.+.+|+..++....++..+. .+.-+ .++|.+.++++|+.|+.+|.|.+.+....+.|.||..++++=.
T Consensus 120 lLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl--~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~ 197 (399)
T KOG0296|consen 120 LLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWL--KWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGE 197 (399)
T ss_pred EEEecCCCccEEEEEcccCceEEEeecccCceEEE--EecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCccccc
Confidence 988764 6899999999888776665332 23222 3488999999999999999999998888899999999999999
Q ss_pred EcCCCCEEEEeeCCCcEEEEeCCCCCeeeeee
Q psy6442 173 FSPDGELYASGSEDGTLRLWQTNVGKTYGLWK 204 (231)
Q Consensus 173 ~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~ 204 (231)
|.|+|.+++++..||+|++||..+++++...+
T Consensus 198 f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~ 229 (399)
T KOG0296|consen 198 FIPDGKRILTGYDDGTIIVWNPKTGQPLHKIT 229 (399)
T ss_pred ccCCCceEEEEecCceEEEEecCCCceeEEec
Confidence 99999999999999999999999999886655
No 57
>KOG0310|consensus
Probab=99.88 E-value=1.9e-21 Score=158.72 Aligned_cols=201 Identities=21% Similarity=0.259 Sum_probs=164.0
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE- 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~- 79 (231)
|...|.|+++|-++-..++.+.+|+.+|..+.|+|++ ++.+++|+.|+.+++||+.+......+.
T Consensus 86 GD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d--------------~t~l~s~sDd~v~k~~d~s~a~v~~~l~~ 151 (487)
T KOG0310|consen 86 GDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQD--------------NTMLVSGSDDKVVKYWDLSTAYVQAELSG 151 (487)
T ss_pred cCCcCcEEEeccccHHHHHHHhhccCceeEEEecccC--------------CeEEEecCCCceEEEEEcCCcEEEEEecC
Confidence 3467889999955555788999999999999999964 6679999999999999999887533333
Q ss_pred eCCcceeEEEccCCCEEEE--EcCCeEEEEECCCc-ceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc-
Q psy6442 80 FGAVPNSLEISRDGTTITV--THGSCVTFLDANSL-ELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG- 155 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~--~~~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~- 155 (231)
+...+.+.+++|....+++ ++|+.|++||++.. ..+.+++...++..+.+ -|.+.++++++ ...+++||+.+|
T Consensus 152 htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl~--lpsgs~iasAg-Gn~vkVWDl~~G~ 228 (487)
T KOG0310|consen 152 HTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVLA--LPSGSLIASAG-GNSVKVWDLTTGG 228 (487)
T ss_pred CcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEecCCCceeeEEE--cCCCCEEEEcC-CCeEEEEEecCCc
Confidence 4578899999998775444 46899999999876 66677777777765554 56777777765 457899999855
Q ss_pred ceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCc
Q psy6442 156 AEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDS 218 (231)
Q Consensus 156 ~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (231)
+.+..+..|...|+|+.+..++..|.|++-|+.|++||+.+-|.+..|+--.+-++..++.++
T Consensus 229 qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~~~pvLsiavs~dd 291 (487)
T KOG0310|consen 229 QLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKYPGPVLSIAVSPDD 291 (487)
T ss_pred eehhhhhcccceEEEEEeecCCceEeecccccceEEEEccceEEEEeeecccceeeEEecCCC
Confidence 555666669999999999999999999999999999999999999999998888888888754
No 58
>KOG0268|consensus
Probab=99.88 E-value=4.8e-22 Score=157.18 Aligned_cols=193 Identities=23% Similarity=0.426 Sum_probs=150.9
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEecccccccc-------------------------CCCEE
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK-------------------------NNTRL 55 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~-------------------------~~~~l 55 (231)
||.||.|++|+..+-+++.+|+.|.|.|..+.+.. ..+++.+.|.++. .+..+
T Consensus 85 Gs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~~p~~tilg~s~~~gIdh~~~~~~F 162 (433)
T KOG0268|consen 85 GSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDGPPLHTILGKSVYLGIDHHRKNSVF 162 (433)
T ss_pred cccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeeccCCcceeeeccccccccccccccccc
Confidence 57899999999999999999999999999998876 3333443333111 23445
Q ss_pred EEEeCCCCEEEEeCCCCCceEEEEeC-CcceeEEEccCCCEEEEE--cCCeEEEEECCCcceEEeeeccceeEEEEEEec
Q psy6442 56 ISCAEDKTVRLWDVSASAEVQKLEFG-AVPNSLEISRDGTTITVT--HGSCVTFLDANSLELIKEHKVPAQVHSASLLLN 132 (231)
Q Consensus 56 ~s~s~D~ti~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 132 (231)
+|||. .|-|||.....++..+..+ +.+.++.++|-...++++ .++.|.++|.+...+++........+.++| +
T Consensus 163 aTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~Isw--n 238 (433)
T KOG0268|consen 163 ATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMRTNTICW--N 238 (433)
T ss_pred cccCc--eeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeeccccceec--C
Confidence 55553 4666666666666666654 457888899987765543 578999999999888877666555555666 7
Q ss_pred CCCCEEEEecCCCeEEEEeCCC-cceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCe
Q psy6442 133 SERPIFVCGGEDLKMYKFDYST-GAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKT 199 (231)
Q Consensus 133 ~~~~~~~~g~~d~~i~~~d~~~-~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~ 199 (231)
|..-.+++|++|.+++.||++. ..++..+.+|..+|.+++|||.|+-++|||.|.+||||.++.+..
T Consensus 239 PeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~S 306 (433)
T KOG0268|consen 239 PEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHS 306 (433)
T ss_pred ccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcc
Confidence 8888899999999999999975 356778899999999999999999999999999999999977764
No 59
>KOG0646|consensus
Probab=99.88 E-value=3.6e-21 Score=156.31 Aligned_cols=181 Identities=19% Similarity=0.363 Sum_probs=149.8
Q ss_pred cCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCC---------CC
Q psy6442 3 VDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSA---------SA 73 (231)
Q Consensus 3 ~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~---------~~ 73 (231)
.-|++++|...+|+++..+..|-..|.++.|+.|+ ..++|+|.||.|.+|++.+ -+
T Consensus 101 i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dg---------------s~iiTgskDg~V~vW~l~~lv~a~~~~~~~ 165 (476)
T KOG0646|consen 101 ISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDG---------------SHIITGSKDGAVLVWLLTDLVSADNDHSVK 165 (476)
T ss_pred ccCcEEEEEeccccHHHHHHhhccceeEEEEeCCC---------------cEEEecCCCccEEEEEEEeecccccCCCcc
Confidence 77999999999999999999999999999999875 4589999999999998742 22
Q ss_pred ceEEEE-eCCcceeEEEccCC---CEEEEEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEE
Q psy6442 74 EVQKLE-FGAVPNSLEISRDG---TTITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYK 149 (231)
Q Consensus 74 ~~~~~~-~~~~~~~v~~~~~~---~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~ 149 (231)
.+..+. +.-++.++.+.+.+ +.+.++.|.++++||+..+..+..+..|..+.++.+ +|.+..+..|+.+|.|++
T Consensus 166 p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~l--Dpae~~~yiGt~~G~I~~ 243 (476)
T KOG0646|consen 166 PLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVAL--DPAERVVYIGTEEGKIFQ 243 (476)
T ss_pred ceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEE--cccccEEEecCCcceEEe
Confidence 333332 34577888877654 344567789999999999999999988888887766 889999999999999998
Q ss_pred EeCCC----------------cceeeeccCCCC--CeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCee
Q psy6442 150 FDYST----------------GAEIESFKGHFG--PIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 150 ~d~~~----------------~~~~~~~~~h~~--~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~ 200 (231)
.++.. +..+..+.||.+ +|+|++++-||.+|+||+.||.|.|||+.+.+-+
T Consensus 244 ~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~i 312 (476)
T KOG0646|consen 244 NLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCI 312 (476)
T ss_pred eehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHH
Confidence 76632 123556789998 9999999999999999999999999999877644
No 60
>KOG0305|consensus
Probab=99.88 E-value=5e-21 Score=160.54 Aligned_cols=195 Identities=22% Similarity=0.296 Sum_probs=161.6
Q ss_pred CCcCCCceeeeccCCCeEeeeec-ccccEEEEEECCCCceeEecccccccc----------------------------C
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEG-HKGCVWGVDINKDASKAASGAADFQAK----------------------------N 51 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~g-H~~~V~~~~~~~~~~~~~s~~~d~~~~----------------------------~ 51 (231)
|..+|+|.+||..+.+.++++.+ |.+.|-+++|+ +..+.+|+.+..+. +
T Consensus 235 G~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d 312 (484)
T KOG0305|consen 235 GTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPD 312 (484)
T ss_pred eecCCeEEEEehhhccccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCC
Confidence 35789999999999999999999 99999999999 55677776654321 7
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCceEEE-EeCCcceeEEEccCCCEEEEE----cCCeEEEEECCCcceEEeeeccceeEE
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAEVQKL-EFGAVPNSLEISRDGTTITVT----HGSCVTFLDANSLELIKEHKVPAQVHS 126 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~----~~~~i~~~d~~~~~~~~~~~~~~~~~~ 126 (231)
+.++|+++.|..+.|||........++ ++...+..++|+|-..-+++. .|++|++|+..+...+.......++..
T Consensus 313 ~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcs 392 (484)
T KOG0305|consen 313 GNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCS 392 (484)
T ss_pred CCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCceee
Confidence 899999999999999999766665554 577889999999987755543 357999999999998888888778877
Q ss_pred EEEEecCCCCEEE--EecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCe
Q psy6442 127 ASLLLNSERPIFV--CGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKT 199 (231)
Q Consensus 127 ~~~~~~~~~~~~~--~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~ 199 (231)
+.| ++....++ .|..+..|.+|...+...+..+.+|...|..+++||||..+++|+.|.++++|++-....
T Consensus 393 L~W--sk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~~~ 465 (484)
T KOG0305|consen 393 LIW--SKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDERP 465 (484)
T ss_pred EEE--cCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCCCC
Confidence 766 55544344 345567899999999999999999999999999999999999999999999999876443
No 61
>KOG0283|consensus
Probab=99.88 E-value=4.9e-21 Score=164.94 Aligned_cols=179 Identities=21% Similarity=0.333 Sum_probs=144.1
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF 80 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~ 80 (231)
.|+|.|||||...+.++|++|. |.+.|+|++|+|. |+.+++|||-|+.||||++...+.+.-..+
T Consensus 386 SSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPv--------------DDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl 450 (712)
T KOG0283|consen 386 SSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPV--------------DDRYFISGSLDGKVRLWSISDKKVVDWNDL 450 (712)
T ss_pred ccccccEEeecCCCcceeeEEe-cCCeeEEEEeccc--------------CCCcEeecccccceEEeecCcCeeEeehhh
Confidence 3799999999999999999988 9999999999994 577899999999999999998887766677
Q ss_pred CCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeee--------cc-ceeEEEEEEecCCCCEEEEecCCCeEEEE
Q psy6442 81 GAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHK--------VP-AQVHSASLLLNSERPIFVCGGEDLKMYKF 150 (231)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~g~~d~~i~~~ 150 (231)
...|+++++.|||+..+++ ..|..++|+....+...... .. .+++.+.+. ..+...++..+.|.+|+++
T Consensus 451 ~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~-p~~~~~vLVTSnDSrIRI~ 529 (712)
T KOG0283|consen 451 RDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFF-PGDPDEVLVTSNDSRIRIY 529 (712)
T ss_pred hhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEec-CCCCCeEEEecCCCceEEE
Confidence 8899999999999977664 57899999987655433211 11 134444442 1222245666889999999
Q ss_pred eCCCcceeeeccCCCC--CeeEEEEcCCCCEEEEeeCCCcEEEEeCC
Q psy6442 151 DYSTGAEIESFKGHFG--PIHCVKFSPDGELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 151 d~~~~~~~~~~~~h~~--~V~~v~~spd~~~laS~s~d~~v~iwd~~ 195 (231)
|.++..+++.|+|+.. .=....|+.||.+++++++|..|.||+..
T Consensus 530 d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~ 576 (712)
T KOG0283|consen 530 DGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKND 576 (712)
T ss_pred eccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCC
Confidence 9988888999987643 33567999999999999999999999973
No 62
>KOG1407|consensus
Probab=99.88 E-value=7.5e-21 Score=144.70 Aligned_cols=219 Identities=17% Similarity=0.221 Sum_probs=180.4
Q ss_pred CCcCCCceeeeccCCCeEee--eecccccEEEEEECCC-CceeEecccccccc--------------------------C
Q psy6442 1 MCVDGKPMLRQGDTGDWIGT--FEGHKGCVWGVDINKD-ASKAASGAADFQAK--------------------------N 51 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~--l~gH~~~V~~~~~~~~-~~~~~s~~~d~~~~--------------------------~ 51 (231)
++-|+++++|+.+.++++.. ++||.+.|-.+.|.|. ..++++++.+..++ +
T Consensus 38 gs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~eni~i~wsp~ 117 (313)
T KOG1407|consen 38 GSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETKGENINITWSPD 117 (313)
T ss_pred cccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeeccCcceEEEEcCC
Confidence 46799999999998887665 4799999999999864 57888887775443 6
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcC-CeEEEEECCCcceEEeeeccceeEEEEEE
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHG-SCVTFLDANSLELIKEHKVPAQVHSASLL 130 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 130 (231)
+++++.++.|.-|-+.|.++.+.....++...++.++|+.++..++...+ +++.+..-...+++..++.+. ..++++.
T Consensus 118 g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~-snCicI~ 196 (313)
T KOG1407|consen 118 GEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHP-SNCICIE 196 (313)
T ss_pred CCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCC-cceEEEE
Confidence 78889999999999999998888777777788889999977777666655 899998877777666665433 5667777
Q ss_pred ecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcc
Q psy6442 131 LNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGL 210 (231)
Q Consensus 131 ~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~ 210 (231)
++|+|+.+|+|+.|..+-+||+..--+++.+..+.-||+.++||.||++|||||+|..|-|=++++|......++ ++-
T Consensus 197 f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~~--~~~ 274 (313)
T KOG1407|consen 197 FDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIPC--EGP 274 (313)
T ss_pred ECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEeec--cCC
Confidence 899999999999999999999988778888989999999999999999999999999999999999986655444 555
Q ss_pred cCCCCCCccccc
Q psy6442 211 NNSLGLDSSGHL 222 (231)
Q Consensus 211 ~~~~~~~~~~~~ 222 (231)
-++++|-+.-+.
T Consensus 275 t~tVAWHPk~~L 286 (313)
T KOG1407|consen 275 TFTVAWHPKRPL 286 (313)
T ss_pred ceeEEecCCCce
Confidence 566777664443
No 63
>KOG0319|consensus
Probab=99.88 E-value=5.4e-21 Score=162.69 Aligned_cols=195 Identities=20% Similarity=0.284 Sum_probs=157.0
Q ss_pred CCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEecccccccc--------------------------------C
Q psy6442 4 DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK--------------------------------N 51 (231)
Q Consensus 4 d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~--------------------------------~ 51 (231)
-+.+|+++..+-.+- -+.||++.|.+++...+|..++|++.|..++ .
T Consensus 345 s~~lr~y~~~~~~c~-ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~ 423 (775)
T KOG0319|consen 345 SPELRLYTLPTSYCQ-IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLG 423 (775)
T ss_pred CCceEEEecCCCceE-EEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccC
Confidence 345677765544443 6789999999999777788999998875442 3
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCce---EEE-------EeCCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeec
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAEV---QKL-------EFGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKV 120 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~~---~~~-------~~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~ 120 (231)
...++|+|.|.++|+|++...+.. ..+ .++..+++|+++|+...++.+ .|.+.++|+............
T Consensus 424 asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsG 503 (775)
T KOG0319|consen 424 ASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSG 503 (775)
T ss_pred ccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeC
Confidence 467999999999999999762211 111 245789999999999988764 578999999986666666655
Q ss_pred cc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCe
Q psy6442 121 PA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKT 199 (231)
Q Consensus 121 ~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~ 199 (231)
+. .+.+.. +.+..+++++++.|.+|++|.+.+.+++++|+||...|..++|-.+|.+|+||+.||-|+||++.+..=
T Consensus 504 H~RGvw~V~--Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC 581 (775)
T KOG0319|consen 504 HTRGVWCVS--FSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNEC 581 (775)
T ss_pred CccceEEEE--eccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhh
Confidence 43 454444 488889999999999999999999999999999999999999999999999999999999999987764
Q ss_pred ee
Q psy6442 200 YG 201 (231)
Q Consensus 200 ~~ 201 (231)
..
T Consensus 582 ~~ 583 (775)
T KOG0319|consen 582 EM 583 (775)
T ss_pred hh
Confidence 43
No 64
>KOG0274|consensus
Probab=99.88 E-value=4.5e-21 Score=165.35 Aligned_cols=182 Identities=22% Similarity=0.338 Sum_probs=153.9
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE- 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~- 79 (231)
|+.|.++|+|+..+|++.++|.||++.|.+++..+ ..+++||.|.+||+|++..+.++..+.
T Consensus 267 gS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~-----------------~~~~sgs~D~tVkVW~v~n~~~l~l~~~ 329 (537)
T KOG0274|consen 267 GSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDP-----------------FLLVSGSRDNTVKVWDVTNGACLNLLRG 329 (537)
T ss_pred EecCCcEEeEecCCCcEEEEecCCCceEEEEEccC-----------------ceEeeccCCceEEEEeccCcceEEEecc
Confidence 57899999999999999999999999999997654 357889999999999999999999988
Q ss_pred eCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc-ce
Q psy6442 80 FGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG-AE 157 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~-~~ 157 (231)
+..+|+++... ....+..+.++.|.+|+..+.++++....+. .+.++.+ .+. ..+++|+.|..|++||+.+. ++
T Consensus 330 h~~~V~~v~~~-~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~--~~~-~~~~Sgs~D~~IkvWdl~~~~~c 405 (537)
T KOG0274|consen 330 HTGPVNCVQLD-EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIV--DSE-NRLLSGSLDTTIKVWDLRTKRKC 405 (537)
T ss_pred ccccEEEEEec-CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEe--cCc-ceEEeeeeccceEeecCCchhhh
Confidence 88899999988 4445556778899999999999988877643 4444333 333 78999999999999999998 89
Q ss_pred eeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeec
Q psy6442 158 IESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKC 205 (231)
Q Consensus 158 ~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~ 205 (231)
+.++.+|.+-|.++. ..+++|++++.|++|++||..+++.....++
T Consensus 406 ~~tl~~h~~~v~~l~--~~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~ 451 (537)
T KOG0274|consen 406 IHTLQGHTSLVSSLL--LRDNFLVSSSADGTIKLWDAEEGECLRTLEG 451 (537)
T ss_pred hhhhcCCcccccccc--cccceeEeccccccEEEeecccCceeeeecc
Confidence 999999999886544 4567999999999999999999987766654
No 65
>KOG0640|consensus
Probab=99.87 E-value=4.7e-21 Score=149.15 Aligned_cols=188 Identities=20% Similarity=0.295 Sum_probs=150.8
Q ss_pred EeeeecccccEEEEEECCCCceeEecccccccc---------------------------------------------CC
Q psy6442 18 IGTFEGHKGCVWGVDINKDASKAASGAADFQAK---------------------------------------------NN 52 (231)
Q Consensus 18 i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~---------------------------------------------~~ 52 (231)
...+..|++++.+-.|++||.++++|+.|-.+. ..
T Consensus 105 t~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre 184 (430)
T KOG0640|consen 105 TKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRE 184 (430)
T ss_pred eEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchh
Confidence 345778999999999999999999998764321 35
Q ss_pred CEEEEEeCCCCEEEEeCCCCCc---eEEEEeCCcceeEEEccCCCEEEEEc-CCeEEEEECCCcceEEeeecc--ceeEE
Q psy6442 53 TRLISCAEDKTVRLWDVSASAE---VQKLEFGAVPNSLEISRDGTTITVTH-GSCVTFLDANSLELIKEHKVP--AQVHS 126 (231)
Q Consensus 53 ~~l~s~s~D~ti~iwd~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~i~~~d~~~~~~~~~~~~~--~~~~~ 126 (231)
..|+|++.|++||++|+..... ...++-..++.+++|+|.|.+++++. ...+++||.++.++....... .....
T Consensus 185 ~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai 264 (430)
T KOG0640|consen 185 TILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAI 264 (430)
T ss_pred heEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccce
Confidence 7899999999999999976432 22333346789999999999988865 579999999998876554422 11222
Q ss_pred EEEEecCCCCEEEEecCCCeEEEEeCCCcceeeec-cCCC-CCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeee
Q psy6442 127 ASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESF-KGHF-GPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWK 204 (231)
Q Consensus 127 ~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~-~~h~-~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~ 204 (231)
..+..++.+.+.++++.||.|++||--++.++.++ ++|. +.|.++.|+.+++++.|.+.|.+|++|.+.+++.....+
T Consensus 265 ~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~Yt 344 (430)
T KOG0640|consen 265 TQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYT 344 (430)
T ss_pred eEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEe
Confidence 33445889999999999999999999999998887 4675 679999999999999999999999999999998775554
Q ss_pred c
Q psy6442 205 C 205 (231)
Q Consensus 205 ~ 205 (231)
+
T Consensus 345 G 345 (430)
T KOG0640|consen 345 G 345 (430)
T ss_pred c
Confidence 3
No 66
>KOG0318|consensus
Probab=99.87 E-value=3.5e-20 Score=152.69 Aligned_cols=183 Identities=20% Similarity=0.281 Sum_probs=157.3
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE- 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~- 79 (231)
||+|++|-++++.=-++-.+++.|+..|.++.|+||| .+++|+|.||++.+||=.+++.+..+.
T Consensus 166 ~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG---------------~~Fat~gsDgki~iyDGktge~vg~l~~ 230 (603)
T KOG0318|consen 166 GSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDG---------------SRFATAGSDGKIYIYDGKTGEKVGELED 230 (603)
T ss_pred ccCCCeEEEeeCCCeeeeecccccccceeeEEECCCC---------------CeEEEecCCccEEEEcCCCccEEEEecC
Confidence 6899999999988888999999999999999999985 458999999999999999999888876
Q ss_pred ---eCCcceeEEEccCCCEEE-EEcCCeEEEEECCCcceEEeeeccce--eEEEEEEecCCCCEEEEecCCCeEEEEeCC
Q psy6442 80 ---FGAVPNSLEISRDGTTIT-VTHGSCVTFLDANSLELIKEHKVPAQ--VHSASLLLNSERPIFVCGGEDLKMYKFDYS 153 (231)
Q Consensus 80 ---~~~~~~~v~~~~~~~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~ 153 (231)
+...++.++|+||+..++ ++.+.++++||..+.++++++..... -..+.+.+. ...+++-+.+|.|-.++..
T Consensus 231 ~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq--kd~lItVSl~G~in~ln~~ 308 (603)
T KOG0318|consen 231 SDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ--KDHLITVSLSGTINYLNPS 308 (603)
T ss_pred CCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEe--CCeEEEEEcCcEEEEeccc
Confidence 567899999999998765 56788999999999999888766433 122222223 4468888999999999999
Q ss_pred CcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCee
Q psy6442 154 TGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 154 ~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~ 200 (231)
....++.+.||...|+++..+||+.+|.||+.||.|.=|+..+|...
T Consensus 309 d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~ 355 (603)
T KOG0318|consen 309 DPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSD 355 (603)
T ss_pred CCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCcccc
Confidence 88888999999999999999999999999999999999999887643
No 67
>KOG0294|consensus
Probab=99.87 E-value=9.3e-21 Score=147.52 Aligned_cols=179 Identities=16% Similarity=0.321 Sum_probs=154.6
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF 80 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~ 80 (231)
|+.||.+.+|+...=+++.++++|++.|..++.+|.+++ .+|.+.|+.++.|++-.++....+.+
T Consensus 103 ~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KL---------------ALsVg~D~~lr~WNLV~Gr~a~v~~L 167 (362)
T KOG0294|consen 103 GSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKL---------------ALSVGGDQVLRTWNLVRGRVAFVLNL 167 (362)
T ss_pred ecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCce---------------EEEEcCCceeeeehhhcCccceeecc
Confidence 578999999999888999999999999999999998654 56888999999999999988877888
Q ss_pred CCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeee
Q psy6442 81 GAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIES 160 (231)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~ 160 (231)
......|.|+|.|..+++...+.|-+|.+.+....++...+....+..+ -++..+++|+++..|.+||..+..++..
T Consensus 168 ~~~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~---l~~~~L~vG~d~~~i~~~D~ds~~~~~~ 244 (362)
T KOG0294|consen 168 KNKATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKRILCATF---LDGSELLVGGDNEWISLKDTDSDTPLTE 244 (362)
T ss_pred CCcceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhccccceeeee---cCCceEEEecCCceEEEeccCCCcccee
Confidence 8888889999999988888888899999988777777666654444333 3566789999999999999999889999
Q ss_pred ccCCCCCeeEEEE--cCCCCEEEEeeCCCcEEEEeCCCC
Q psy6442 161 FKGHFGPIHCVKF--SPDGELYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 161 ~~~h~~~V~~v~~--spd~~~laS~s~d~~v~iwd~~~~ 197 (231)
+.+|.+.|-++.+ .|++.+|+|+|.||.|++||+...
T Consensus 245 ~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 245 FLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred eecchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 9999999999884 346789999999999999999766
No 68
>KOG0281|consensus
Probab=99.87 E-value=1.6e-21 Score=153.80 Aligned_cols=190 Identities=17% Similarity=0.239 Sum_probs=147.8
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEecccccccc----------------------------CC
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK----------------------------NN 52 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~----------------------------~~ 52 (231)
||.|.+|++||.++|+.+.+|-+|...|..+.|+.. +..+.+.|..+. +.
T Consensus 253 GSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~ng--~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~ 330 (499)
T KOG0281|consen 253 GSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSNG--YMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD 330 (499)
T ss_pred cCCCceEEEEeccCCchhhHHhhhcceeEEEEEeCC--EEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeecccc
Confidence 688999999999999999999999999999999853 555555543221 67
Q ss_pred CEEEEEeCCCCEEEEeCCCCCceEEEEe-CCcceeEEEccCCCEEEE-EcCCeEEEEECCCcceEEeeeccce-eEEEEE
Q psy6442 53 TRLISCAEDKTVRLWDVSASAEVQKLEF-GAVPNSLEISRDGTTITV-THGSCVTFLDANSLELIKEHKVPAQ-VHSASL 129 (231)
Q Consensus 53 ~~l~s~s~D~ti~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~ 129 (231)
++++|+|.|+|||+|++.+.++++++.- +..+.++++ .++.++. +.+.+|++||...+.+++....+.+ +.++.+
T Consensus 331 kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRF 408 (499)
T KOG0281|consen 331 KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 408 (499)
T ss_pred ceEEEecCCceEEEEeccceeeehhhhcccccceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheee
Confidence 8999999999999999999999988863 334444433 3444433 4578999999999988877665443 333333
Q ss_pred EecCCCCEEEEecCCCeEEEEeCCCcc---------eeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCee
Q psy6442 130 LLNSERPIFVCGGEDLKMYKFDYSTGA---------EIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 130 ~~~~~~~~~~~g~~d~~i~~~d~~~~~---------~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~ 200 (231)
+...+++|+.||+|++||+..+. ++.++..|.+.|..+.| |...+++++.|.+|-|||+-++.+-
T Consensus 409 ----d~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWdFl~~~~~ 482 (499)
T KOG0281|consen 409 ----DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWDFLNGPPS 482 (499)
T ss_pred ----cCceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEee--cceEEEeccCCCeEEEEEcCCCCcc
Confidence 56679999999999999996543 23455679999999888 4558999999999999999887654
No 69
>KOG0647|consensus
Probab=99.87 E-value=9.4e-21 Score=146.75 Aligned_cols=196 Identities=21% Similarity=0.289 Sum_probs=146.0
Q ss_pred CCcCCCceeeeccC-CCeEee-eecccccEEEEEECCCCceeEecccccccc----------------------------
Q psy6442 1 MCVDGKPMLRQGDT-GDWIGT-FEGHKGCVWGVDINKDASKAASGAADFQAK---------------------------- 50 (231)
Q Consensus 1 ~~~d~~~~~~~~~~-g~~i~~-l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~---------------------------- 50 (231)
+|=||+||+|+... |.++.. ...|.++|.++.|+.||.++++|+.|....
T Consensus 46 ~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~~~v~~Hd~pvkt~~wv~~~ 125 (347)
T KOG0647|consen 46 GSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQVSQVAAHDAPVKTCHWVPGM 125 (347)
T ss_pred cccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCCeeeeeecccceeEEEEecCC
Confidence 36699999999965 665443 567999999999999999999998875432
Q ss_pred CCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcCCeEEEEECCCcc-eEEeeeccc--eeEEE
Q psy6442 51 NNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANSLE-LIKEHKVPA--QVHSA 127 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~--~~~~~ 127 (231)
+-.+|+|+|+|+|||+||.+....+.+++++..++++..-.+ ..+++..++.|.+++++... ..+.+..|. ..+++
T Consensus 126 ~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~p-m~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~v 204 (347)
T KOG0647|consen 126 NYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYP-MAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCV 204 (347)
T ss_pred CcceeEecccccceeecccCCCCeeeeeeccceeeehhccCc-eeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEE
Confidence 346899999999999999999999999999888776654432 23334457789999985433 334444444 34444
Q ss_pred EEEecCCCCEEEEecCCCeEEEEeCCCc--ceeeeccCCC---------CCeeEEEEcCCCCEEEEeeCCCcEEEEeCCC
Q psy6442 128 SLLLNSERPIFVCGGEDLKMYKFDYSTG--AEIESFKGHF---------GPIHCVKFSPDGELYASGSEDGTLRLWQTNV 196 (231)
Q Consensus 128 ~~~~~~~~~~~~~g~~d~~i~~~d~~~~--~~~~~~~~h~---------~~V~~v~~spd~~~laS~s~d~~v~iwd~~~ 196 (231)
++ ..+....+.|+-.|++-+..+..+ +.-.+|+.|. -+|++++|+|....|++++.||+...||-..
T Consensus 205 a~--f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkda 282 (347)
T KOG0647|consen 205 AC--FQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDA 282 (347)
T ss_pred EE--EecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchh
Confidence 44 555555688999999888776654 3333445554 2589999999999999999999999999765
Q ss_pred CCe
Q psy6442 197 GKT 199 (231)
Q Consensus 197 ~~~ 199 (231)
...
T Consensus 283 r~k 285 (347)
T KOG0647|consen 283 RTK 285 (347)
T ss_pred hhh
Confidence 543
No 70
>KOG0310|consensus
Probab=99.87 E-value=2.7e-20 Score=152.03 Aligned_cols=181 Identities=23% Similarity=0.281 Sum_probs=151.8
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCC-CceEEEE
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSAS-AEVQKLE 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~-~~~~~~~ 79 (231)
|++|+.+++|+.+++.....+.+|++.|.+.+|+|. ++..++|||+||+||+||++.. ..+.++.
T Consensus 129 ~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~--------------~~hivvtGsYDg~vrl~DtR~~~~~v~eln 194 (487)
T KOG0310|consen 129 GSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPA--------------NDHIVVTGSYDGKVRLWDTRSLTSRVVELN 194 (487)
T ss_pred cCCCceEEEEEcCCcEEEEEecCCcceeEeeccccC--------------CCeEEEecCCCceEEEEEeccCCceeEEec
Confidence 578999999999988876689999999999999985 3456999999999999999987 6677788
Q ss_pred eCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceE-Eeee-ccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcce
Q psy6442 80 FGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELI-KEHK-VPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAE 157 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~ 157 (231)
++.++.++.+-|.|..++.+.++.+++||+..+... .... ....++++.+ ..++..|++|+-|+.+++||+.+-+.
T Consensus 195 hg~pVe~vl~lpsgs~iasAgGn~vkVWDl~~G~qll~~~~~H~KtVTcL~l--~s~~~rLlS~sLD~~VKVfd~t~~Kv 272 (487)
T KOG0310|consen 195 HGCPVESVLALPSGSLIASAGGNSVKVWDLTTGGQLLTSMFNHNKTVTCLRL--ASDSTRLLSGSLDRHVKVFDTTNYKV 272 (487)
T ss_pred CCCceeeEEEcCCCCEEEEcCCCeEEEEEecCCceehhhhhcccceEEEEEe--ecCCceEeecccccceEEEEccceEE
Confidence 899999999999999998888999999998755443 2222 3345666655 56778999999999999999877777
Q ss_pred eeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCC
Q psy6442 158 IESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 158 ~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~ 198 (231)
++.+. ..+||.+++.+|+++.++.|-.||.+.+=+...++
T Consensus 273 v~s~~-~~~pvLsiavs~dd~t~viGmsnGlv~~rr~~~k~ 312 (487)
T KOG0310|consen 273 VHSWK-YPGPVLSIAVSPDDQTVVIGMSNGLVSIRRREVKK 312 (487)
T ss_pred EEeee-cccceeeEEecCCCceEEEecccceeeeehhhccc
Confidence 77775 67899999999999999999999998877554444
No 71
>KOG0300|consensus
Probab=99.87 E-value=1.4e-20 Score=147.10 Aligned_cols=192 Identities=17% Similarity=0.265 Sum_probs=154.9
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEecccccccc------------------------------
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK------------------------------ 50 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~------------------------------ 50 (231)
++.|.+.++|+.++|+++.+|.||.|.|.++.|++.+.++++++.|....
T Consensus 166 ASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe 245 (481)
T KOG0300|consen 166 ASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDE 245 (481)
T ss_pred cccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccc
Confidence 47899999999999999999999999999999999999999997763211
Q ss_pred -------------------------------------CCCEEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccC
Q psy6442 51 -------------------------------------NNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRD 92 (231)
Q Consensus 51 -------------------------------------~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~ 92 (231)
.+++++|+|+|+|..+||+.++..+..+. +....+.++-+|.
T Consensus 246 ~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHpt 325 (481)
T KOG0300|consen 246 HNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPT 325 (481)
T ss_pred cccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCc
Confidence 67899999999999999999999887765 4667889999999
Q ss_pred CCEEEEE-cCCeEEEEECCCc-ceEEeeeccc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc-ceeeeccCCCCCe
Q psy6442 93 GTTITVT-HGSCVTFLDANSL-ELIKEHKVPA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG-AEIESFKGHFGPI 168 (231)
Q Consensus 93 ~~~~~~~-~~~~i~~~d~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~-~~~~~~~~h~~~V 168 (231)
.+.++.+ .+.+.++||.+.. ..+..+..+. .+....+ . .+..+++|++|.+|++||++.. .++.++. -..++
T Consensus 326 QrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF--~-~dd~vVSgSDDrTvKvWdLrNMRsplATIR-tdS~~ 401 (481)
T KOG0300|consen 326 QRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVF--N-TDDRVVSGSDDRTVKVWDLRNMRSPLATIR-TDSPA 401 (481)
T ss_pred ceEEEEeccCceeEeccchhhcceeeeecccccceeEEEE--e-cCCceeecCCCceEEEeeeccccCcceeee-cCCcc
Confidence 8877664 5789999997742 2233444332 3444444 3 3345899999999999999875 4566654 45789
Q ss_pred eEEEEcCCCCEEEEeeCCCcEEEEeCCC
Q psy6442 169 HCVKFSPDGELYASGSEDGTLRLWQTNV 196 (231)
Q Consensus 169 ~~v~~spd~~~laS~s~d~~v~iwd~~~ 196 (231)
+.++.+..+.++|---+++.|||||+.-
T Consensus 402 NRvavs~g~~iIAiPhDNRqvRlfDlnG 429 (481)
T KOG0300|consen 402 NRVAVSKGHPIIAIPHDNRQVRLFDLNG 429 (481)
T ss_pred ceeEeecCCceEEeccCCceEEEEecCC
Confidence 9999999999999999999999999843
No 72
>KOG0283|consensus
Probab=99.87 E-value=1.9e-20 Score=161.42 Aligned_cols=158 Identities=14% Similarity=0.158 Sum_probs=127.0
Q ss_pred CCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCC-EEEE-EcCCeEEEEECCCcceEEeeeccceeEEEE
Q psy6442 51 NNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGT-TITV-THGSCVTFLDANSLELIKEHKVPAQVHSAS 128 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 128 (231)
.++.|+|+|.|+|||+|++...+|+..+.+...|++++|+|-+. +++- +-|+.+++|++...++..-.+.+.-+.+++
T Consensus 379 Kn~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvc 458 (712)
T KOG0283|consen 379 KNNFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVC 458 (712)
T ss_pred cCCeeEeccccccEEeecCCCcceeeEEecCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEE
Confidence 67899999999999999999999999999999999999999554 4433 458999999999888776666666666666
Q ss_pred EEecCCCCEEEEecCCCeEEEEeCCCcceeeecc---------CCCCCeeEEEEcCCC-CEEEEeeCCCcEEEEeCCCCC
Q psy6442 129 LLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFK---------GHFGPIHCVKFSPDG-ELYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 129 ~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~---------~h~~~V~~v~~spd~-~~laS~s~d~~v~iwd~~~~~ 198 (231)
+ .|+|+..+.|+.+|.+++|+....+....+. .|. .|+.+.|.|.. ..++..+.|..|||+|.+..+
T Consensus 459 y--~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~ 535 (712)
T KOG0283|consen 459 Y--SPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKD 535 (712)
T ss_pred e--ccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchh
Confidence 6 8889999999999999999987655433221 133 79999999854 456677889999999998888
Q ss_pred eeeeeeccCCccc
Q psy6442 199 TYGLWKCIEGGLN 211 (231)
Q Consensus 199 ~~~~~~~~~~~~~ 211 (231)
....++++.+.-+
T Consensus 536 lv~KfKG~~n~~S 548 (712)
T KOG0283|consen 536 LVHKFKGFRNTSS 548 (712)
T ss_pred hhhhhcccccCCc
Confidence 7777776665544
No 73
>KOG0275|consensus
Probab=99.86 E-value=3.9e-21 Score=150.51 Aligned_cols=190 Identities=23% Similarity=0.346 Sum_probs=157.4
Q ss_pred CCcCCCceeeeccCCCeEeeee-cccccEEEEEECCCCceeEecccccccc---------------------------CC
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFE-GHKGCVWGVDINKDASKAASGAADFQAK---------------------------NN 52 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~-gH~~~V~~~~~~~~~~~~~s~~~d~~~~---------------------------~~ 52 (231)
|+.||++++|...+|++++.|. .|+..|.++.|+.|+..+.+++.|..++ ++
T Consensus 281 GsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG 360 (508)
T KOG0275|consen 281 GSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDG 360 (508)
T ss_pred cCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCC
Confidence 5789999999999999999997 8999999999999999999999886554 78
Q ss_pred CEEEEEeCCCCEEEEeCCCCCceEEEEeC---CcceeEEEccCCC-EEEE-EcCCeEEEEECCCcceEEeeecc----ce
Q psy6442 53 TRLISCAEDKTVRLWDVSASAEVQKLEFG---AVPNSLEISRDGT-TITV-THGSCVTFLDANSLELIKEHKVP----AQ 123 (231)
Q Consensus 53 ~~l~s~s~D~ti~iwd~~~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~-~~~~~i~~~d~~~~~~~~~~~~~----~~ 123 (231)
..++|||.||+||+|+..+.+|+.++... ..++++-.-|-.. .+++ ...+++.+++... +.++.+... ..
T Consensus 361 ~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qG-QvVrsfsSGkREgGd 439 (508)
T KOG0275|consen 361 HHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQG-QVVRSFSSGKREGGD 439 (508)
T ss_pred CeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccc-eEEeeeccCCccCCc
Confidence 89999999999999999999998887642 3567777766543 3444 4467777777643 344444321 22
Q ss_pred eEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEe
Q psy6442 124 VHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQ 193 (231)
Q Consensus 124 ~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd 193 (231)
...+ ..+|.|..+.+.++|+.++.|...+|.+.+++.-|...|..++-+|..++|||-++||.+++|.
T Consensus 440 Fi~~--~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 440 FINA--ILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred eEEE--EecCCCcEEEEEccCcEEEEEEeecCceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence 3333 3489999999999999999999999999999999999999999999999999999999999995
No 74
>KOG0643|consensus
Probab=99.86 E-value=1.3e-20 Score=143.84 Aligned_cols=192 Identities=26% Similarity=0.394 Sum_probs=148.8
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccc----------cc---------------------
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADF----------QA--------------------- 49 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~----------~~--------------------- 49 (231)
++.|.+++|||..+|+.+++++ -..+|..++|+++|++++....+. .+
T Consensus 70 GSAD~t~kLWDv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~s 148 (327)
T KOG0643|consen 70 GSADQTAKLWDVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDS 148 (327)
T ss_pred ccccceeEEEEcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCcc
Confidence 5789999999999999999998 367899999999998776442210 00
Q ss_pred --------cCCCEEEEEeCCCCEEEEeCCCCCceEE-E-EeCCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEee
Q psy6442 50 --------KNNTRLISCAEDKTVRLWDVSASAEVQK-L-EFGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEH 118 (231)
Q Consensus 50 --------~~~~~l~s~s~D~ti~iwd~~~~~~~~~-~-~~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~ 118 (231)
.-++.|++|..||.|.+||+++++.+.. . .+...++++++++|...++.+ .+.+-.+||..+.++++++
T Consensus 149 kit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty 228 (327)
T KOG0643|consen 149 KITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTY 228 (327)
T ss_pred ceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEe
Confidence 1467899999999999999999855432 2 245689999999999877664 5788899999999999999
Q ss_pred eccceeEEEEEEecCCCCEEEEecCC-Ce-E------------EEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEee
Q psy6442 119 KVPAQVHSASLLLNSERPIFVCGGED-LK-M------------YKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGS 184 (231)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~g~~d-~~-i------------~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s 184 (231)
....|+++..+ .|-...++.|+.. -+ + +.|++-.-+++..++||-+||++|+|+|+|...+||+
T Consensus 229 ~te~PvN~aai--sP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGG 306 (327)
T KOG0643|consen 229 TTERPVNTAAI--SPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGG 306 (327)
T ss_pred eecccccceec--ccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCC
Confidence 99888887776 5555555555432 11 1 1122222245677889999999999999999999999
Q ss_pred CCCcEEEEeCC
Q psy6442 185 EDGTLRLWQTN 195 (231)
Q Consensus 185 ~d~~v~iwd~~ 195 (231)
+||.|||-.+.
T Consensus 307 EDG~VR~h~Fd 317 (327)
T KOG0643|consen 307 EDGYVRLHHFD 317 (327)
T ss_pred CCceEEEEEec
Confidence 99999998654
No 75
>KOG2096|consensus
Probab=99.86 E-value=6.4e-21 Score=148.81 Aligned_cols=159 Identities=21% Similarity=0.387 Sum_probs=111.2
Q ss_pred EeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCce------EEEEeCCcceeEEEcc
Q psy6442 18 IGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEV------QKLEFGAVPNSLEISR 91 (231)
Q Consensus 18 i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~------~~~~~~~~~~~v~~~~ 91 (231)
+.+|+||.+.|.+++|+.+| +.|+|++.|++|++|++++.... ..++. ..++.|.|.|
T Consensus 79 ~~~LKgH~~~vt~~~FsSdG---------------K~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~-dhpT~V~Fap 142 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDG---------------KKLATISGDRSIRLWDVRDFENKEHRCIRQNVEY-DHPTRVVFAP 142 (420)
T ss_pred hhhhhccCCceeeeEEcCCC---------------ceeEEEeCCceEEEEecchhhhhhhhHhhccccC-CCceEEEECC
Confidence 55689999999999999875 45899999999999999875321 11222 2567778888
Q ss_pred CCCEEEEE--cCCeEEEEECCC-----------------------------------------------------cceEE
Q psy6442 92 DGTTITVT--HGSCVTFLDANS-----------------------------------------------------LELIK 116 (231)
Q Consensus 92 ~~~~~~~~--~~~~i~~~d~~~-----------------------------------------------------~~~~~ 116 (231)
|-+.++++ .++.+.+|.... ++.+.
T Consensus 143 Dc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lkGq~L~ 222 (420)
T KOG2096|consen 143 DCKSVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLKGQLLQ 222 (420)
T ss_pred CcceEEEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecCCceee
Confidence 77655443 234555443210 11111
Q ss_pred eeeccc-eeEEEEEEecCCCCEEEEecCCCeEEEEeC---CCc-----ceeeeccCCCCCeeEEEEcCCCCEEEEeeCCC
Q psy6442 117 EHKVPA-QVHSASLLLNSERPIFVCGGEDLKMYKFDY---STG-----AEIESFKGHFGPIHCVKFSPDGELYASGSEDG 187 (231)
Q Consensus 117 ~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~---~~~-----~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~ 187 (231)
.++... ...- ...+|+|+++++++...-+++|+. +.| .....++||.+.|+.++|||+...++|.|.||
T Consensus 223 ~idtnq~~n~~--aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG 300 (420)
T KOG2096|consen 223 SIDTNQSSNYD--AAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDG 300 (420)
T ss_pred eeccccccccc--eeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCC
Confidence 111111 0111 124789999999988888888876 222 23456889999999999999999999999999
Q ss_pred cEEEEeC
Q psy6442 188 TLRLWQT 194 (231)
Q Consensus 188 ~v~iwd~ 194 (231)
++||||+
T Consensus 301 ~wriwdt 307 (420)
T KOG2096|consen 301 KWRIWDT 307 (420)
T ss_pred cEEEeec
Confidence 9999997
No 76
>KOG0277|consensus
Probab=99.86 E-value=1.3e-20 Score=142.89 Aligned_cols=178 Identities=20% Similarity=0.272 Sum_probs=140.7
Q ss_pred CcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe-
Q psy6442 2 CVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF- 80 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~- 80 (231)
|=|++|+||+...++-++|++||...|+...|+|. ....++++|.|+++++||++.......++.
T Consensus 124 SWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~--------------~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah 189 (311)
T KOG0277|consen 124 SWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPH--------------IPNLFASASGDGTLRLWDVRSPGKFMSIEAH 189 (311)
T ss_pred ccCCceEeecCCCCcceEeecCCccEEEEEecCCC--------------CCCeEEEccCCceEEEEEecCCCceeEEEec
Confidence 55999999999999999999999999999999985 356799999999999999986544444654
Q ss_pred CCcceeEEEccCCCEEEEE--cCCeEEEEECCCcce-EEeeec-cceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc-
Q psy6442 81 GAVPNSLEISRDGTTITVT--HGSCVTFLDANSLEL-IKEHKV-PAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG- 155 (231)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~~--~~~~i~~~d~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~- 155 (231)
...+.++-|+.-...+++. .++.|+.||++..+. +.+... ...+..+.+++ ....++++++.|.++++||...+
T Consensus 190 ~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sp-h~~~lLaSasYDmT~riw~~~~~d 268 (311)
T KOG0277|consen 190 NSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSP-HHASLLASASYDMTVRIWDPERQD 268 (311)
T ss_pred cceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCc-chhhHhhhccccceEEecccccch
Confidence 4588999999876655543 467999999987553 233322 23445444432 23457899999999999999744
Q ss_pred ceeeeccCCCCCeeEEEEcC-CCCEEEEeeCCCcEEEEeC
Q psy6442 156 AEIESFKGHFGPIHCVKFSP-DGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 156 ~~~~~~~~h~~~V~~v~~sp-d~~~laS~s~d~~v~iwd~ 194 (231)
..+.+...|+.-|..+.||+ ++.++|+++.|..+.||+.
T Consensus 269 s~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 269 SAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred hhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence 45677888999999999999 4679999999999999984
No 77
>KOG0306|consensus
Probab=99.86 E-value=1.2e-20 Score=161.02 Aligned_cols=186 Identities=20% Similarity=0.370 Sum_probs=154.6
Q ss_pred CcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCC-----CC---
Q psy6442 2 CVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSA-----SA--- 73 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~-----~~--- 73 (231)
...|.+.+++.....++.+.+.|.|.||+++.+|| +..++|+|.|+|||+||+.- +.
T Consensus 431 ~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD---------------~~g~vT~saDktVkfWdf~l~~~~~gt~~k 495 (888)
T KOG0306|consen 431 TKNGELQVFDLASASLVETIRAHDGAIWSISLSPD---------------NKGFVTGSADKTVKFWDFKLVVSVPGTQKK 495 (888)
T ss_pred ccCCceEEEEeehhhhhhhhhccccceeeeeecCC---------------CCceEEecCCcEEEEEeEEEEeccCcccce
Confidence 34577888888888888888899999999999997 45589999999999999731 11
Q ss_pred -----ceEEEEeCCcceeEEEccCCCEEEEEc-CCeEEEEECCCcceEEe-eeccceeEEEEEEecCCCCEEEEecCCCe
Q psy6442 74 -----EVQKLEFGAVPNSLEISRDGTTITVTH-GSCVTFLDANSLELIKE-HKVPAQVHSASLLLNSERPIFVCGGEDLK 146 (231)
Q Consensus 74 -----~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~d~~ 146 (231)
..+++++...+.+++++||+++++++- ++++++|-..+.+..-. +....|+.+ +..+|++.++++|+.|.+
T Consensus 496 ~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~s--mDIS~DSklivTgSADKn 573 (888)
T KOG0306|consen 496 VLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLS--MDISPDSKLIVTGSADKN 573 (888)
T ss_pred eeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeE--EeccCCcCeEEeccCCCc
Confidence 124566778899999999999998874 78999988877765433 334456654 455899999999999999
Q ss_pred EEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeee
Q psy6442 147 MYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWK 204 (231)
Q Consensus 147 i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~ 204 (231)
|++|-+.-|.+.+.+.+|...|.++.|-|+.+++.||+.|+.|+=||....+.++.+.
T Consensus 574 VKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~ 631 (888)
T KOG0306|consen 574 VKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLD 631 (888)
T ss_pred eEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhheeec
Confidence 9999999999999999999999999999999999999999999999988887776554
No 78
>KOG0313|consensus
Probab=99.86 E-value=3.7e-20 Score=147.24 Aligned_cols=192 Identities=19% Similarity=0.266 Sum_probs=154.1
Q ss_pred CCcCCCceeeeccCCCe----EeeeecccccEEEEEECCCCceeEecccccccc--------------------------
Q psy6442 1 MCVDGKPMLRQGDTGDW----IGTFEGHKGCVWGVDINKDASKAASGAADFQAK-------------------------- 50 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~----i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~-------------------------- 50 (231)
+|+|-+++||.-+-|++ +..-+||...|-+++..+++..+.+|+.|-.+.
T Consensus 165 as~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~ 244 (423)
T KOG0313|consen 165 ASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKRE 244 (423)
T ss_pred ecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhh
Confidence 47899999999887765 333459999999999999999999998763221
Q ss_pred -------------------------CCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEE-cCCeE
Q psy6442 51 -------------------------NNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCV 104 (231)
Q Consensus 51 -------------------------~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~i 104 (231)
+...++|+|+|.|||.||+.++.+..++..+...+++..+|....++.+ .+..+
T Consensus 245 ~~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~i 324 (423)
T KOG0313|consen 245 KEGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHI 324 (423)
T ss_pred hcccccCceEEecccccceeeEEEcCCCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCce
Confidence 6678999999999999999999999888888899999999987777665 47899
Q ss_pred EEEECCCcce--E-Eeeecc-ceeEEEEEEecC-CCCEEEEecCCCeEEEEeCCCcc-eeeeccCCCCCeeEEEEcCCCC
Q psy6442 105 TFLDANSLEL--I-KEHKVP-AQVHSASLLLNS-ERPIFVCGGEDLKMYKFDYSTGA-EIESFKGHFGPIHCVKFSPDGE 178 (231)
Q Consensus 105 ~~~d~~~~~~--~-~~~~~~-~~~~~~~~~~~~-~~~~~~~g~~d~~i~~~d~~~~~-~~~~~~~h~~~V~~v~~spd~~ 178 (231)
++||.+...- + ..+..+ .-+..+.+ +| +..+|++|+.|+++++||+++.. ++..+.+|...|.++.|+.- .
T Consensus 325 rl~DPR~~~gs~v~~s~~gH~nwVssvkw--sp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~~-~ 401 (423)
T KOG0313|consen 325 RLWDPRTGDGSVVSQSLIGHKNWVSSVKW--SPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNEG-G 401 (423)
T ss_pred eecCCCCCCCceeEEeeecchhhhhheec--CCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccCC-c
Confidence 9999886532 1 222222 12333333 44 44568999999999999999876 89999999999999999654 5
Q ss_pred EEEEeeCCCcEEEEeCC
Q psy6442 179 LYASGSEDGTLRLWQTN 195 (231)
Q Consensus 179 ~laS~s~d~~v~iwd~~ 195 (231)
.++||+.|.+|+|+...
T Consensus 402 ~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 402 LIVSGGADNKLRIFKGS 418 (423)
T ss_pred eEEeccCcceEEEeccc
Confidence 89999999999999753
No 79
>KOG1036|consensus
Probab=99.86 E-value=3.3e-20 Score=144.02 Aligned_cols=203 Identities=20% Similarity=0.271 Sum_probs=137.5
Q ss_pred CcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeC
Q psy6442 2 CVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFG 81 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~ 81 (231)
+.||+||+.|.++++-.. +..|.+.|.++..++. ...++++|+|++||+||.+.......+..+
T Consensus 72 ~~dg~vr~~Dln~~~~~~-igth~~~i~ci~~~~~---------------~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~ 135 (323)
T KOG1036|consen 72 GLDGQVRRYDLNTGNEDQ-IGTHDEGIRCIEYSYE---------------VGCVISGSWDKTIKFWDPRNKVVVGTFDQG 135 (323)
T ss_pred ccCceEEEEEecCCccee-eccCCCceEEEEeecc---------------CCeEEEcccCccEEEEeccccccccccccC
Confidence 345555555544443322 2335555555544432 457999999999999999976666666556
Q ss_pred CcceeEEEccCCCEEEE-EcCCeEEEEECCCcceEE---eeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc--
Q psy6442 82 AVPNSLEISRDGTTITV-THGSCVTFLDANSLELIK---EHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG-- 155 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~-- 155 (231)
..++++... +..+++ ..+.++.+||++...... +.....+..++.+ .|++.-.+.++-+|++.+=.....
T Consensus 136 kkVy~~~v~--g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~--~pn~eGy~~sSieGRVavE~~d~s~~ 211 (323)
T KOG1036|consen 136 KKVYCMDVS--GNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVAL--VPNGEGYVVSSIEGRVAVEYFDDSEE 211 (323)
T ss_pred ceEEEEecc--CCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEE--ecCCCceEEEeecceEEEEccCCchH
Confidence 667666555 445555 668899999998765432 2223344555555 455555888899999877544443
Q ss_pred --ceeeeccCCCC---------CeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCccccccc
Q psy6442 156 --AEIESFKGHFG---------PIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGHLNN 224 (231)
Q Consensus 156 --~~~~~~~~h~~---------~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (231)
+.-..|+.|.. ||++++|+|-...||||+.||.|.+||+.+.|.+..+-.+ +....+++|..+|-++-
T Consensus 212 ~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~-~~SI~slsfs~dG~~LA 290 (323)
T KOG1036|consen 212 AQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKY-ETSISSLSFSMDGSLLA 290 (323)
T ss_pred HhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchhhhhhccCC-CCceEEEEeccCCCeEE
Confidence 22334555532 7999999999999999999999999999999987666554 45567888888888775
Q ss_pred e
Q psy6442 225 V 225 (231)
Q Consensus 225 ~ 225 (231)
|
T Consensus 291 i 291 (323)
T KOG1036|consen 291 I 291 (323)
T ss_pred E
Confidence 4
No 80
>KOG0295|consensus
Probab=99.86 E-value=9.8e-20 Score=144.14 Aligned_cols=177 Identities=18% Similarity=0.282 Sum_probs=148.3
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE- 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~- 79 (231)
++.|.++..|+.++|-++.+|.+|...|..++.+.| +..+++||.|.++++|-+.+++|...+.
T Consensus 211 ~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~D---------------Gti~As~s~dqtl~vW~~~t~~~k~~lR~ 275 (406)
T KOG0295|consen 211 CSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQD---------------GTIIASCSNDQTLRVWVVATKQCKAELRE 275 (406)
T ss_pred cccccceeEEecccceeEEeccCchHhEEEEEecCC---------------eeEEEecCCCceEEEEEeccchhhhhhhc
Confidence 578999999999999999999999999999999876 4558999999999999999986654443
Q ss_pred eCCcceeEEEccCC---------------CEEE-EEcCCeEEEEECCCcceEEeeeccc-eeEEEEEEecCCCCEEEEec
Q psy6442 80 FGAVPNSLEISRDG---------------TTIT-VTHGSCVTFLDANSLELIKEHKVPA-QVHSASLLLNSERPIFVCGG 142 (231)
Q Consensus 80 ~~~~~~~v~~~~~~---------------~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~ 142 (231)
++-++.+++|.|.. +.+. .+.|++|++||..+..++-+..... -+..+ +++|.|+++++..
T Consensus 276 hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~--af~p~Gkyi~Sca 353 (406)
T KOG0295|consen 276 HEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGV--AFSPGGKYILSCA 353 (406)
T ss_pred cccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeee--EEcCCCeEEEEEe
Confidence 34456666665421 2222 3467899999999999887776543 45444 4499999999999
Q ss_pred CCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 143 EDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 143 ~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
+|+++++||++..++.++++.|..-|++++|..+-.+++||+-|.++++|.-
T Consensus 354 DDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 354 DDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred cCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence 9999999999999999999999999999999999999999999999999974
No 81
>KOG0973|consensus
Probab=99.85 E-value=9e-20 Score=160.93 Aligned_cols=221 Identities=18% Similarity=0.261 Sum_probs=177.6
Q ss_pred cCCCceeeecc------------CCCeEeeeecccccEEEEEECCCCceeEecccccccc--------------------
Q psy6442 3 VDGKPMLRQGD------------TGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK-------------------- 50 (231)
Q Consensus 3 ~d~~~~~~~~~------------~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~-------------------- 50 (231)
.||..++|+.+ --+.+++...|.++|.|+.|++||+++++|+.|..+.
T Consensus 35 ~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~ 114 (942)
T KOG0973|consen 35 LDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAK 114 (942)
T ss_pred ccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCccccccccccc
Confidence 57777788863 1356788889999999999999999999998874311
Q ss_pred -------------------------CCCEEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCCEEEE-EcCCe
Q psy6442 51 -------------------------NNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITV-THGSC 103 (231)
Q Consensus 51 -------------------------~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~-~~~~~ 103 (231)
++..|+|+|.|++|.||+.++++++..+. +...|..+.|.|-|++++. +.|.+
T Consensus 115 ~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrt 194 (942)
T KOG0973|consen 115 NVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRT 194 (942)
T ss_pred ccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCce
Confidence 67899999999999999999998877775 5678999999999999886 46789
Q ss_pred EEEEECCCcceEEeeecc-----ceeEEEEEEecCCCCEEEEecC----CCeEEEEeCCCcceeeeccCCCCCeeEEEEc
Q psy6442 104 VTFLDANSLELIKEHKVP-----AQVHSASLLLNSERPIFVCGGE----DLKMYKFDYSTGAEIESFKGHFGPIHCVKFS 174 (231)
Q Consensus 104 i~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~~----d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~s 174 (231)
+++|+..+....+.+..| .......+.++|+|.++++... ..++.+.+-.+-+.-..|-||.+++.+++|+
T Consensus 195 ikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFn 274 (942)
T KOG0973|consen 195 LKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFN 274 (942)
T ss_pred EEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeC
Confidence 999998887666655443 2233345556999999998743 3457777655545556788999999999999
Q ss_pred CC-----CC------------EEEEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCcccccc
Q psy6442 175 PD-----GE------------LYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGHLN 223 (231)
Q Consensus 175 pd-----~~------------~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (231)
|. .. .+|+||.|++|.||.....+++..-..+++....=++|.++|-.+
T Consensus 275 P~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~L 340 (942)
T KOG0973|consen 275 PKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSL 340 (942)
T ss_pred hHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeE
Confidence 93 11 689999999999999999999988888999988888998888654
No 82
>KOG0302|consensus
Probab=99.84 E-value=6.8e-20 Score=145.71 Aligned_cols=182 Identities=22% Similarity=0.347 Sum_probs=142.0
Q ss_pred CcCCCceeeecc----------------CCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEE
Q psy6442 2 CVDGKPMLRQGD----------------TGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVR 65 (231)
Q Consensus 2 ~~d~~~~~~~~~----------------~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~ 65 (231)
+..|.|.+|+.. ..+.+.++.+|.+.=++++|+|- ....|+||..-+.|+
T Consensus 172 se~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~--------------~~g~LlsGDc~~~I~ 237 (440)
T KOG0302|consen 172 SENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPI--------------KTGRLLSGDCVKGIH 237 (440)
T ss_pred cccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccc--------------cccccccCccccceE
Confidence 567888888862 23568888999998899999983 234578888889999
Q ss_pred EEeCCCCCce----EEEEeCCcceeEEEccCCCEEEE--EcCCeEEEEECCCc---ceEEeeeccceeEEEEEEecCCCC
Q psy6442 66 LWDVSASAEV----QKLEFGAVPNSLEISRDGTTITV--THGSCVTFLDANSL---ELIKEHKVPAQVHSASLLLNSERP 136 (231)
Q Consensus 66 iwd~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~--~~~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 136 (231)
+|...++.-. ....+...+..++|+|....+++ ++++.|++||.+.. ..+.+......++.++| +....
T Consensus 238 lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISW--nr~~~ 315 (440)
T KOG0302|consen 238 LWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISW--NRREP 315 (440)
T ss_pred eeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEc--cCCcc
Confidence 9998876431 12235678899999998876654 56899999999876 33333333456776666 77777
Q ss_pred EEEEecCCCeEEEEeCCC---cceeeeccCCCCCeeEEEEcCC-CCEEEEeeCCCcEEEEeCCCCCe
Q psy6442 137 IFVCGGEDLKMYKFDYST---GAEIESFKGHFGPIHCVKFSPD-GELYASGSEDGTLRLWQTNVGKT 199 (231)
Q Consensus 137 ~~~~g~~d~~i~~~d~~~---~~~~~~~~~h~~~V~~v~~spd-~~~laS~s~d~~v~iwd~~~~~~ 199 (231)
+|++|++||++++||+++ ++++.+|+-|+++|+++.|+|. ...|++++.|.+|.|||+...+.
T Consensus 316 lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D 382 (440)
T KOG0302|consen 316 LLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEAD 382 (440)
T ss_pred eeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCC
Confidence 999999999999999974 5678899999999999999996 46888899999999999876554
No 83
>KOG0645|consensus
Probab=99.84 E-value=4.2e-19 Score=135.84 Aligned_cols=188 Identities=20% Similarity=0.309 Sum_probs=139.1
Q ss_pred CCcCCCceeeeccCCC--eEeeeecccccEEEEEECCCCceeEeccccccc-----------------------------
Q psy6442 1 MCVDGKPMLRQGDTGD--WIGTFEGHKGCVWGVDINKDASKAASGAADFQA----------------------------- 49 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~--~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~----------------------------- 49 (231)
+|-|.++-+|....++ ++.+|+||...|-+++|+++|++|++.+.|..+
T Consensus 79 aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~W 158 (312)
T KOG0645|consen 79 ASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIW 158 (312)
T ss_pred eeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEE
Confidence 4678999999987665 688999999999999999999999999876432
Q ss_pred -cCCCEEEEEeCCCCEEEEeCCC-C--CceEEEEe-CCcceeEEEccCCCEE-EEEcCCeEEEEECCCcceEEeeeccce
Q psy6442 50 -KNNTRLISCAEDKTVRLWDVSA-S--AEVQKLEF-GAVPNSLEISRDGTTI-TVTHGSCVTFLDANSLELIKEHKVPAQ 123 (231)
Q Consensus 50 -~~~~~l~s~s~D~ti~iwd~~~-~--~~~~~~~~-~~~~~~v~~~~~~~~~-~~~~~~~i~~~d~~~~~~~~~~~~~~~ 123 (231)
.....|+|+|+|.|||+|+... . .++.++.- ...+.+++|.|.|..+ .++.++++++|.....-. ..+ ..+
T Consensus 159 HPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~~-~~~--sr~ 235 (312)
T KOG0645|consen 159 HPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTDLS-GMH--SRA 235 (312)
T ss_pred cCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccCcc-hhc--ccc
Confidence 1347899999999999998763 2 45555543 3478899999999665 456788999997442110 001 111
Q ss_pred eEEEEEEecCCCCEEEEecCCCeEEEEeCCCcc------ee-eeccCCCCCeeEEEEcCC-CCEEEEeeCCCcEEEEeCC
Q psy6442 124 VHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA------EI-ESFKGHFGPIHCVKFSPD-GELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 124 ~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~------~~-~~~~~h~~~V~~v~~spd-~~~laS~s~d~~v~iwd~~ 195 (231)
+..+.+ . ...+++++.|..|++|...... .+ +.-..|...|++++|.|. ..+|+||+.||.|++|.+.
T Consensus 236 ~Y~v~W--~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 236 LYDVPW--D--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred eEeeee--c--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 222233 2 4468999999999999765431 11 123468889999999995 6799999999999999864
No 84
>KOG0293|consensus
Probab=99.84 E-value=2.4e-19 Score=144.15 Aligned_cols=214 Identities=17% Similarity=0.206 Sum_probs=166.5
Q ss_pred CCcCCCceeeeccCC---CeEeeeecccccEEEEEECCCCceeEeccccccc----------------------------
Q psy6442 1 MCVDGKPMLRQGDTG---DWIGTFEGHKGCVWGVDINKDASKAASGAADFQA---------------------------- 49 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g---~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~---------------------------- 49 (231)
++.|-++.+|..... ++.++|.||..+|.-+.|+||.+++.+.+.+-..
T Consensus 242 aSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~ 321 (519)
T KOG0293|consen 242 ASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWC 321 (519)
T ss_pred ccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEc
Confidence 467888899988433 4588999999999999999999999987654211
Q ss_pred cCCCEEEEEeCCCCEEEEeCCCCCceEEEE--eCCcceeEEEccCCCEEE-EEcCCeEEEEECCCcceEEeeeccceeEE
Q psy6442 50 KNNTRLISCAEDKTVRLWDVSASAEVQKLE--FGAVPNSLEISRDGTTIT-VTHGSCVTFLDANSLELIKEHKVPAQVHS 126 (231)
Q Consensus 50 ~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 126 (231)
.++..+++||.|+++..||+.... ....+ -.+.+.+++.++||+.++ +..+..|++++............+.+++.
T Consensus 322 pDg~~~V~Gs~dr~i~~wdlDgn~-~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its 400 (519)
T KOG0293|consen 322 PDGFRFVTGSPDRTIIMWDLDGNI-LGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITS 400 (519)
T ss_pred cCCceeEecCCCCcEEEecCCcch-hhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccccCceeE
Confidence 278899999999999999986542 11111 125678999999999765 46688999998776555555555666766
Q ss_pred EEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCC--eeEEEEcC-CCCEEEEeeCCCcEEEEeCCCCCeeeee
Q psy6442 127 ASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGP--IHCVKFSP-DGELYASGSEDGTLRLWQTNVGKTYGLW 203 (231)
Q Consensus 127 ~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~--V~~v~~sp-d~~~laS~s~d~~v~iwd~~~~~~~~~~ 203 (231)
.++ +.++.+++.--.+..+++||++....+..+.||+.. +-.-+|-- +..++||||+|+.|+||+..+|+....+
T Consensus 401 ~~i--S~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~L 478 (519)
T KOG0293|consen 401 FSI--SKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVL 478 (519)
T ss_pred EEE--cCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEee
Confidence 555 888999999889999999999988889999999754 32334544 4579999999999999999999999999
Q ss_pred eccCCcccCCCCCCc
Q psy6442 204 KCIEGGLNNSLGLDS 218 (231)
Q Consensus 204 ~~~~~~~~~~~~~~~ 218 (231)
.++. ...|.+++.+
T Consensus 479 sGHs-~~vNcVswNP 492 (519)
T KOG0293|consen 479 SGHS-KTVNCVSWNP 492 (519)
T ss_pred cCCc-ceeeEEecCC
Confidence 8865 5677777766
No 85
>KOG0264|consensus
Probab=99.84 E-value=1.4e-19 Score=146.63 Aligned_cols=211 Identities=20% Similarity=0.264 Sum_probs=152.0
Q ss_pred CcCCCceeeeccCCC--e--------EeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCC
Q psy6442 2 CVDGKPMLRQGDTGD--W--------IGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSA 71 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~--~--------i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~ 71 (231)
+..+.|++|+-.+-. . --+|+||++.=+++.|++. ....|++++.|++|.+||+..
T Consensus 144 t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~--------------~~g~Lls~~~d~~i~lwdi~~ 209 (422)
T KOG0264|consen 144 TSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQ--------------QEGTLLSGSDDHTICLWDINA 209 (422)
T ss_pred CCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccc--------------cceeEeeccCCCcEEEEeccc
Confidence 557788999863221 1 1168899987677888874 356799999999999999975
Q ss_pred CCc----e---EEE-EeCCcceeEEEccCCCEEE--EEcCCeEEEEECCCc--ceEEeeec-cceeEEEEEEecCCCCEE
Q psy6442 72 SAE----V---QKL-EFGAVPNSLEISRDGTTIT--VTHGSCVTFLDANSL--ELIKEHKV-PAQVHSASLLLNSERPIF 138 (231)
Q Consensus 72 ~~~----~---~~~-~~~~~~~~v~~~~~~~~~~--~~~~~~i~~~d~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~ 138 (231)
... + ..+ .+...+..++|++-...++ ++.++++.+||.+.. +..+.... ..+++++.+.+ .++.++
T Consensus 210 ~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp-~~~~il 288 (422)
T KOG0264|consen 210 ESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNP-FNEFIL 288 (422)
T ss_pred cccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCC-CCCceE
Confidence 433 1 111 2457889999999776554 567889999999852 22222222 45677666632 246678
Q ss_pred EEecCCCeEEEEeCCC-cceeeeccCCCCCeeEEEEcCCC-CEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCC
Q psy6442 139 VCGGEDLKMYKFDYST-GAEIESFKGHFGPIHCVKFSPDG-ELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGL 216 (231)
Q Consensus 139 ~~g~~d~~i~~~d~~~-~~~~~~~~~h~~~V~~v~~spd~-~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 216 (231)
|+|+.|+++.+||++. ...++++++|...|..|.|||.. ..|||++.|+.+.|||+..--..+.++....+ +--+.|
T Consensus 289 AT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dg-ppEllF 367 (422)
T KOG0264|consen 289 ATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDG-PPELLF 367 (422)
T ss_pred EeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccC-CcceeE
Confidence 9999999999999986 45789999999999999999975 68999999999999998654444445443332 444567
Q ss_pred Cccccccceeee
Q psy6442 217 DSSGHLNNVHEV 228 (231)
Q Consensus 217 ~~~~~~~~~~~~ 228 (231)
.+.||..-|-.|
T Consensus 368 ~HgGH~~kV~Df 379 (422)
T KOG0264|consen 368 IHGGHTAKVSDF 379 (422)
T ss_pred EecCcccccccc
Confidence 778888776554
No 86
>KOG0308|consensus
Probab=99.83 E-value=6.6e-20 Score=154.34 Aligned_cols=186 Identities=22% Similarity=0.328 Sum_probs=144.4
Q ss_pred CCcCCCceeeeccCC------CeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCC--
Q psy6442 1 MCVDGKPMLRQGDTG------DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSAS-- 72 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g------~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~-- 72 (231)
+|-||.+++|+...- ..+.+++.|++.|..+....+ ++.|+|||.|-|||+|+....
T Consensus 43 gGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~---------------~~tlIS~SsDtTVK~W~~~~~~~ 107 (735)
T KOG0308|consen 43 GGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGN---------------GKTLISASSDTTVKVWNAHKDNT 107 (735)
T ss_pred cCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcC---------------CCceEEecCCceEEEeecccCcc
Confidence 577999999997422 257888999999988766554 446999999999999999877
Q ss_pred CceEEE-EeCCcceeEEE-ccCCCEEEE-EcCCeEEEEECCCcc--eEEeee------c--cceeEEEEEEecCCCCEEE
Q psy6442 73 AEVQKL-EFGAVPNSLEI-SRDGTTITV-THGSCVTFLDANSLE--LIKEHK------V--PAQVHSASLLLNSERPIFV 139 (231)
Q Consensus 73 ~~~~~~-~~~~~~~~v~~-~~~~~~~~~-~~~~~i~~~d~~~~~--~~~~~~------~--~~~~~~~~~~~~~~~~~~~ 139 (231)
-|..++ ++...+.++++ .++...++. +-++.|.+||.+..- .+..++ . ..+...+++..++.+..++
T Consensus 108 ~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~iv 187 (735)
T KOG0308|consen 108 FCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIV 187 (735)
T ss_pred hhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEE
Confidence 444454 36678899998 444444333 347899999988652 222211 1 1223345566688888999
Q ss_pred EecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeee
Q psy6442 140 CGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYG 201 (231)
Q Consensus 140 ~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~ 201 (231)
+|+..+.+++||.++.+.+-.+.||+..|..+-.++||..++|+|.||+||+||++..+-.+
T Consensus 188 sGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~ 249 (735)
T KOG0308|consen 188 SGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLA 249 (735)
T ss_pred ecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceee
Confidence 99999999999999999999999999999999999999999999999999999998776443
No 87
>KOG0267|consensus
Probab=99.83 E-value=1.3e-20 Score=160.13 Aligned_cols=185 Identities=21% Similarity=0.288 Sum_probs=154.6
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE- 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~- 79 (231)
|+.|..+-||.-..-..+-.|.+|.++|-++.|+++. ..|+.++.||+||+||+...+.++++.
T Consensus 46 Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E---------------~LlaagsasgtiK~wDleeAk~vrtLtg 110 (825)
T KOG0267|consen 46 GGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSE---------------RLLAAGSASGTIKVWDLEEAKIVRTLTG 110 (825)
T ss_pred CCCceeeccccccCCchhheeeccCCcceeeecCcch---------------hhhcccccCCceeeeehhhhhhhhhhhc
Confidence 4567778888865555677799999999999999864 347889999999999999988877764
Q ss_pred eCCcceeEEEccCCCEEEE-EcCCeEEEEECCCcceEEeeeccce-eEEEEEEecCCCCEEEEecCCCeEEEEeCCCcce
Q psy6442 80 FGAVPNSLEISRDGTTITV-THGSCVTFLDANSLELIKEHKVPAQ-VHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAE 157 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~ 157 (231)
+...+.+|.|+|-+.+.+- +.+..+.+||.+...+...++.+.. +..+. +.|+|++++.|++|..+++||...|+.
T Consensus 111 h~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~--lsP~Gr~v~~g~ed~tvki~d~~agk~ 188 (825)
T KOG0267|consen 111 HLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLR--LSPDGRWVASGGEDNTVKIWDLTAGKL 188 (825)
T ss_pred cccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEe--ecCCCceeeccCCcceeeeeccccccc
Confidence 4567889999998887643 3466889999998888888776433 33333 489999999999999999999999999
Q ss_pred eeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeee
Q psy6442 158 IESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGL 202 (231)
Q Consensus 158 ~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~ 202 (231)
+.+|++|.+.|.++.|+|..-++++|+.|++|++||+++...+..
T Consensus 189 ~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s 233 (825)
T KOG0267|consen 189 SKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISS 233 (825)
T ss_pred ccccccccccccccccCchhhhhccCCCCceeeeeccceeEEeec
Confidence 999999999999999999999999999999999999987766543
No 88
>KOG0275|consensus
Probab=99.83 E-value=1.4e-20 Score=147.37 Aligned_cols=164 Identities=16% Similarity=0.306 Sum_probs=137.1
Q ss_pred ccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE---------eCCcceeEEEccCCC
Q psy6442 24 HKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE---------FGAVPNSLEISRDGT 94 (231)
Q Consensus 24 H~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~---------~~~~~~~v~~~~~~~ 94 (231)
...-+-+..|+||| ++|+|+|.||-|.+|+..+|+....+. ....+.++.|+.|..
T Consensus 212 ~KSh~EcA~FSPDg---------------qyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsE 276 (508)
T KOG0275|consen 212 QKSHVECARFSPDG---------------QYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSE 276 (508)
T ss_pred cccchhheeeCCCC---------------ceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHH
Confidence 34456677788875 458999999999999999987765543 246788999999988
Q ss_pred EEEE-EcCCeEEEEECCCcceEEeeecc--ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEE
Q psy6442 95 TITV-THGSCVTFLDANSLELIKEHKVP--AQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCV 171 (231)
Q Consensus 95 ~~~~-~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v 171 (231)
.++. +.++.|++|.+.++.++++++-. ..+.+. .++.++..+++++.|.++++--+++|+.++.|.||...|+.+
T Consensus 277 MlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l--~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a 354 (508)
T KOG0275|consen 277 MLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCL--SFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEA 354 (508)
T ss_pred HhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEE--EEccCcchhhcccccceEEEeccccchhHHHhcCccccccce
Confidence 7765 45899999999999999888643 245444 448888899999999999999999999999999999999999
Q ss_pred EEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeee
Q psy6442 172 KFSPDGELYASGSEDGTLRLWQTNVGKTYGLWK 204 (231)
Q Consensus 172 ~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~ 204 (231)
.|++||+.++|||.||+|++|+..++.-.++++
T Consensus 355 ~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk 387 (508)
T KOG0275|consen 355 TFTDDGHHIISASSDGTVKVWHGKTTECLSTFK 387 (508)
T ss_pred EEcCCCCeEEEecCCccEEEecCcchhhhhhcc
Confidence 999999999999999999999998877555554
No 89
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.82 E-value=1.2e-17 Score=135.11 Aligned_cols=185 Identities=16% Similarity=0.196 Sum_probs=140.4
Q ss_pred CcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeC
Q psy6442 2 CVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFG 81 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~ 81 (231)
+.|+++++|+..+++.+.++.+|.. +.++.|+|+++.+ +++++.|++|++||..+++.+..+...
T Consensus 8 ~~d~~v~~~d~~t~~~~~~~~~~~~-~~~l~~~~dg~~l--------------~~~~~~~~~v~~~d~~~~~~~~~~~~~ 72 (300)
T TIGR03866 8 EKDNTISVIDTATLEVTRTFPVGQR-PRGITLSKDGKLL--------------YVCASDSDTIQVIDLATGEVIGTLPSG 72 (300)
T ss_pred cCCCEEEEEECCCCceEEEEECCCC-CCceEECCCCCEE--------------EEEECCCCeEEEEECCCCcEEEeccCC
Confidence 5789999999999999999987654 6789999985432 466778999999999988877666655
Q ss_pred CcceeEEEccCCCEEEEE--cCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCC-eEEEEeCCCccee
Q psy6442 82 AVPNSLEISRDGTTITVT--HGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDL-KMYKFDYSTGAEI 158 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~-~i~~~d~~~~~~~ 158 (231)
..+..++++|+++.++++ .++.+.+||..+...+..+........ +.++|++..++++..+. .++.||..+++.+
T Consensus 73 ~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~--~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~ 150 (300)
T TIGR03866 73 PDPELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPVGVEPEG--MAVSPDGKIVVNTSETTNMAHFIDTKTYEIV 150 (300)
T ss_pred CCccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeCCCCcce--EEECCCCCEEEEEecCCCeEEEEeCCCCeEE
Confidence 556788999999987765 357999999988776666554333333 34488999888887765 4677898877765
Q ss_pred eeccCCCCCeeEEEEcCCCCEEE-EeeCCCcEEEEeCCCCCeeeeee
Q psy6442 159 ESFKGHFGPIHCVKFSPDGELYA-SGSEDGTLRLWQTNVGKTYGLWK 204 (231)
Q Consensus 159 ~~~~~h~~~V~~v~~spd~~~la-S~s~d~~v~iwd~~~~~~~~~~~ 204 (231)
..+.. ...+.+++|+|++++|+ ++..++.|++||+.+++....++
T Consensus 151 ~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~ 196 (300)
T TIGR03866 151 DNVLV-DQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKIT 196 (300)
T ss_pred EEEEc-CCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeee
Confidence 54432 23457899999999774 55579999999999998766554
No 90
>KOG0276|consensus
Probab=99.82 E-value=8.8e-19 Score=147.19 Aligned_cols=202 Identities=13% Similarity=0.226 Sum_probs=161.9
Q ss_pred CCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-eCC
Q psy6442 4 DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGA 82 (231)
Q Consensus 4 d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~ 82 (231)
.|+|.+|+-+|...++++.--.-+|.+..|-+. .+.+++||.|..|||++..+.+.+..++ +..
T Consensus 34 nG~V~IWnyetqtmVksfeV~~~PvRa~kfiaR---------------knWiv~GsDD~~IrVfnynt~ekV~~FeAH~D 98 (794)
T KOG0276|consen 34 NGDVQIWNYETQTMVKSFEVSEVPVRAAKFIAR---------------KNWIVTGSDDMQIRVFNYNTGEKVKTFEAHSD 98 (794)
T ss_pred cCeeEEEecccceeeeeeeecccchhhheeeec---------------cceEEEecCCceEEEEecccceeeEEeecccc
Confidence 588999999988888888877778888777553 4569999999999999999999988887 467
Q ss_pred cceeEEEccCCCEEEEEc-CCeEEEEECCCc-ceEEeeeccc-eeEEEEEEecC-CCCEEEEecCCCeEEEEeCCCccee
Q psy6442 83 VPNSLEISRDGTTITVTH-GSCVTFLDANSL-ELIKEHKVPA-QVHSASLLLNS-ERPIFVCGGEDLKMYKFDYSTGAEI 158 (231)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~-~~~i~~~d~~~~-~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~g~~d~~i~~~d~~~~~~~ 158 (231)
.+.+++.+|....++.+. |-.|++||.... .+.++++.+. -+..+++ +| +...+++++-|.+|++|.+.+..+.
T Consensus 99 yIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~f--nPkD~ntFaS~sLDrTVKVWslgs~~~n 176 (794)
T KOG0276|consen 99 YIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAF--NPKDPNTFASASLDRTVKVWSLGSPHPN 176 (794)
T ss_pred ceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEe--cCCCccceeeeeccccEEEEEcCCCCCc
Confidence 899999999999877765 558999997654 4456666554 3444444 44 4567999999999999999999999
Q ss_pred eeccCCCCCeeEEEEcCCC--CEEEEeeCCCcEEEEeCCCCCeeeeeeccCCc---------ccCCCCCCccccc
Q psy6442 159 ESFKGHFGPIHCVKFSPDG--ELYASGSEDGTLRLWQTNVGKTYGLWKCIEGG---------LNNSLGLDSSGHL 222 (231)
Q Consensus 159 ~~~~~h~~~V~~v~~spd~--~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 222 (231)
.+++||...|+++.|-|-| .+|+||++|.+|+|||.++.+=+++++++.++ ++-+|+-+++|.+
T Consensus 177 fTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTv 251 (794)
T KOG0276|consen 177 FTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTV 251 (794)
T ss_pred eeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccE
Confidence 9999999999999999955 69999999999999999998877777655444 3344555556654
No 91
>KOG0299|consensus
Probab=99.82 E-value=7.1e-19 Score=142.90 Aligned_cols=202 Identities=21% Similarity=0.328 Sum_probs=153.1
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEE-E
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKL-E 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~-~ 79 (231)
++.|..+.+|+..+++.+.+|++|.+.|.++.|-.. ...|+++|.|++|++|++.....+.++ .
T Consensus 220 gg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~g---------------t~~lys~s~Drsvkvw~~~~~s~vetlyG 284 (479)
T KOG0299|consen 220 GGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKG---------------TSELYSASADRSVKVWSIDQLSYVETLYG 284 (479)
T ss_pred cCCCceEEEecCcccchhhcccccccceeeeeeecC---------------ccceeeeecCCceEEEehhHhHHHHHHhC
Confidence 456778889999999999999999999999999764 345899999999999999877665554 3
Q ss_pred eCCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeeccc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcce
Q psy6442 80 FGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVPA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAE 157 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~ 157 (231)
++..+..+....-.+.+.++ .|.++++|++.....+ .+..+. .+.++++ .+ ...+++|+.+|.|.+|++...++
T Consensus 285 Hqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~eesql-ifrg~~~sidcv~~-In--~~HfvsGSdnG~IaLWs~~KKkp 360 (479)
T KOG0299|consen 285 HQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEESQL-IFRGGEGSIDCVAF-IN--DEHFVSGSDNGSIALWSLLKKKP 360 (479)
T ss_pred CccceeeechhcccceEEeccccceeEEEecccccee-eeeCCCCCeeeEEE-ec--ccceeeccCCceEEEeeecccCc
Confidence 56677777777777777776 6889999998443222 233222 3444443 33 33489999999999999987776
Q ss_pred eeecc-CCC-----------CCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCC-Ceeee-eeccCCcccCCCCCCcccc
Q psy6442 158 IESFK-GHF-----------GPIHCVKFSPDGELYASGSEDGTLRLWQTNVG-KTYGL-WKCIEGGLNNSLGLDSSGH 221 (231)
Q Consensus 158 ~~~~~-~h~-----------~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 221 (231)
+.+.. +|. .-|++++..|...++||+|.+|.||||.+..+ +.+.. -..-.++..|+|.|..+||
T Consensus 361 lf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~~sgk 438 (479)
T KOG0299|consen 361 LFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLSLVGFVNSLAFSNSGK 438 (479)
T ss_pred eeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecccccEEEEEEEccCCC
Confidence 65532 231 14789999999999999999999999999877 22222 2334788899999999999
No 92
>KOG0269|consensus
Probab=99.81 E-value=1.9e-19 Score=154.09 Aligned_cols=179 Identities=17% Similarity=0.269 Sum_probs=136.9
Q ss_pred CCcCCCceeeeccC---CCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEE
Q psy6442 1 MCVDGKPMLRQGDT---GDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQK 77 (231)
Q Consensus 1 ~~~d~~~~~~~~~~---g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~ 77 (231)
++..|.|-+|+... .+++..|..|+-.|.+++|++-. ...|+|||.||+||+||++..+...+
T Consensus 106 ~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~te--------------p~iliSGSQDg~vK~~DlR~~~S~~t 171 (839)
T KOG0269|consen 106 CSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTE--------------PNILISGSQDGTVKCWDLRSKKSKST 171 (839)
T ss_pred ecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCC--------------ccEEEecCCCceEEEEeeeccccccc
Confidence 45678999999976 56788899999999999999753 45699999999999999998877666
Q ss_pred EEe-CCcceeEEEccCCC-EEEEE-cCCeEEEEECCCcceE-Eeeecc-ceeEEEEEEecCCCCEEEEecCCCeEEEEeC
Q psy6442 78 LEF-GAVPNSLEISRDGT-TITVT-HGSCVTFLDANSLELI-KEHKVP-AQVHSASLLLNSERPIFVCGGEDLKMYKFDY 152 (231)
Q Consensus 78 ~~~-~~~~~~v~~~~~~~-~~~~~-~~~~i~~~d~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~ 152 (231)
... ...+.+|.|+|... .++.. .+|.+.+||++..... ..+..+ .++. ++.++|++.++|+|+.|++|++||+
T Consensus 172 ~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~--c~nwhPnr~~lATGGRDK~vkiWd~ 249 (839)
T KOG0269|consen 172 FRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVL--CLNWHPNREWLATGGRDKMVKIWDM 249 (839)
T ss_pred ccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceE--EEeecCCCceeeecCCCccEEEEec
Confidence 543 35789999998755 34433 4579999998865432 222222 2444 4455899999999999999999999
Q ss_pred CCcce--eeeccCCCCCeeEEEEcCCCC-EEEEee--CCCcEEEEeCCC
Q psy6442 153 STGAE--IESFKGHFGPIHCVKFSPDGE-LYASGS--EDGTLRLWQTNV 196 (231)
Q Consensus 153 ~~~~~--~~~~~~h~~~V~~v~~spd~~-~laS~s--~d~~v~iwd~~~ 196 (231)
.++.. ++++. -.++|..|+|-|+.+ .||+++ .|-.|+|||++-
T Consensus 250 t~~~~~~~~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrR 297 (839)
T KOG0269|consen 250 TDSRAKPKHTIN-TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRR 297 (839)
T ss_pred cCCCccceeEEe-ecceeeeeeeccCccchhhhhhccccceEEEEeecc
Confidence 76543 33332 457999999999864 688887 588899999854
No 93
>KOG0301|consensus
Probab=99.81 E-value=3e-18 Score=145.32 Aligned_cols=189 Identities=20% Similarity=0.294 Sum_probs=150.4
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEecccccccc------------------------CCCEEE
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK------------------------NNTRLI 56 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~------------------------~~~~l~ 56 (231)
+++|+++.+|...+.+.+.+|+||+..|++++...++. +.||++|.+.+ ..+.++
T Consensus 77 g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~~l~~~l~gH~asVWAv~~l~e~~~v 155 (745)
T KOG0301|consen 77 GGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIGELVYSLQGHTASVWAVASLPENTYV 155 (745)
T ss_pred ecccceEEEEecCCCCchhhhhccccceeeeecCCcCc-eEecccccceEEecchhhhcccCCcchheeeeeecCCCcEE
Confidence 57899999999999999999999999999999877777 88999886543 455899
Q ss_pred EEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeecc-ceeEEEEEEecCC
Q psy6442 57 SCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVP-AQVHSASLLLNSE 134 (231)
Q Consensus 57 s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~ 134 (231)
|||.|++||+|.- +++++++. +...+..+++-++..++.+++++.|++|+. +++++.++..+ .-+.+++ ....
T Consensus 156 TgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis--~~~~ 230 (745)
T KOG0301|consen 156 TGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSIS--MALS 230 (745)
T ss_pred eccCcceeeeccC--CchhhhhccchhheeeeEEecCCCeEeecCCceEEEEec-cCceeeeeeccceEEEEEE--ecCC
Confidence 9999999999976 55555554 567899999999999999999999999999 55555554333 3333333 3556
Q ss_pred CCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCC
Q psy6442 135 RPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 135 ~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~ 198 (231)
...++++++|+++++|+.. ++.+.+.--.-.|+++.+-++|.+ ++|+.||.||||....-+
T Consensus 231 ~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgDI-vvg~SDG~VrVfT~~k~R 291 (745)
T KOG0301|consen 231 DGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGDI-VVGGSDGRVRVFTVDKDR 291 (745)
T ss_pred CCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCCE-EEeccCceEEEEEecccc
Confidence 7789999999999999865 556666534458999999999875 567779999999876433
No 94
>KOG0289|consensus
Probab=99.80 E-value=4.9e-18 Score=137.34 Aligned_cols=194 Identities=20% Similarity=0.239 Sum_probs=160.1
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccc-----------------------------cC
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQA-----------------------------KN 51 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~-----------------------------~~ 51 (231)
++.|..+|+|+..+.........|.++|..+..+|.|.++.+++.|... .|
T Consensus 279 aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpD 358 (506)
T KOG0289|consen 279 ASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPD 358 (506)
T ss_pred cCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCC
Confidence 3678899999998787777788999999999999999999999876432 16
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCCEEEEEc-CCeEEEEECCCcceEEeeeccceeEEEEE
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVTH-GSCVTFLDANSLELIKEHKVPAQVHSASL 129 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 129 (231)
+..+.++..|+.+||||+.++..+..+. +..++..++|+.+|.++++.. ++++.+||++..+..+++..+......++
T Consensus 359 gLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~ 438 (506)
T KOG0289|consen 359 GLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSL 438 (506)
T ss_pred ceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeE
Confidence 7789999999999999999888666554 457899999999999988754 56799999998877777766543223334
Q ss_pred EecCCCCEEEEecCCCeEEEEeCCC--cceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 130 LLNSERPIFVCGGEDLKMYKFDYST--GAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 130 ~~~~~~~~~~~g~~d~~i~~~d~~~--~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
.++..|.+++.++.+.+|++++-.+ -.++..+.-|.+..+.+.|..+.+++++++.|..++|+-+
T Consensus 439 ~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 439 SFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred EEcCCCCeEEeecceeEEEEEecccccceeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence 4488899999999999999987433 3567778889999999999999999999999999998754
No 95
>KOG0305|consensus
Probab=99.79 E-value=4.1e-18 Score=143.11 Aligned_cols=183 Identities=19% Similarity=0.253 Sum_probs=145.3
Q ss_pred CcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe-
Q psy6442 2 CVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF- 80 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~- 80 (231)
+....|+||+..+|+...-..-+...|.++.|+++|+ .|+.+-.+|+|.|||....+.++.+..
T Consensus 194 alg~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~---------------~LavG~~~g~v~iwD~~~~k~~~~~~~~ 258 (484)
T KOG0305|consen 194 ALGQSVYLWSASSGSVTELCSFGEELVTSVKWSPDGS---------------HLAVGTSDGTVQIWDVKEQKKTRTLRGS 258 (484)
T ss_pred EecceEEEEecCCCceEEeEecCCCceEEEEECCCCC---------------EEEEeecCCeEEEEehhhccccccccCC
Confidence 4456899999999997665565688999999999854 578888999999999998888777754
Q ss_pred -CCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEe-ee-ccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcce
Q psy6442 81 -GAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKE-HK-VPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAE 157 (231)
Q Consensus 81 -~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~ 157 (231)
...+.+++|.. ........++.|..+|.+..+.... .. ....+.. +.+++++..+|+|+.|..+.+||......
T Consensus 259 h~~rvg~laW~~-~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCg--Lkws~d~~~lASGgnDN~~~Iwd~~~~~p 335 (484)
T KOG0305|consen 259 HASRVGSLAWNS-SVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCG--LKWSPDGNQLASGGNDNVVFIWDGLSPEP 335 (484)
T ss_pred cCceeEEEeccC-ceEEEecCCCcEEEEEEecchhhhhhhhcccceeee--eEECCCCCeeccCCCccceEeccCCCccc
Confidence 66788999992 2223334578899999876554433 22 1234444 44589999999999999999999977788
Q ss_pred eeeccCCCCCeeEEEEcCC-CCEEEEee--CCCcEEEEeCCCCCeeee
Q psy6442 158 IESFKGHFGPIHCVKFSPD-GELYASGS--EDGTLRLWQTNVGKTYGL 202 (231)
Q Consensus 158 ~~~~~~h~~~V~~v~~spd-~~~laS~s--~d~~v~iwd~~~~~~~~~ 202 (231)
+..+..|.++|-.++|+|- ..+||+|+ .|++|++||+.+|+.+..
T Consensus 336 ~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~ 383 (484)
T KOG0305|consen 336 KFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDS 383 (484)
T ss_pred cEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecc
Confidence 8899999999999999994 67999985 799999999999987643
No 96
>KOG0641|consensus
Probab=99.79 E-value=2.6e-17 Score=123.45 Aligned_cols=170 Identities=21% Similarity=0.328 Sum_probs=139.5
Q ss_pred ecccccEEEEEECCCCceeEecccccccc---------------------------------------------------
Q psy6442 22 EGHKGCVWGVDINKDASKAASGAADFQAK--------------------------------------------------- 50 (231)
Q Consensus 22 ~gH~~~V~~~~~~~~~~~~~s~~~d~~~~--------------------------------------------------- 50 (231)
+-|.|.|++++|+|.|+++++|+.|..+.
T Consensus 86 khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~i 165 (350)
T KOG0641|consen 86 KHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKI 165 (350)
T ss_pred cccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceE
Confidence 56899999999999999999998875432
Q ss_pred ---------------------------CCCEEEEEeCCCCEEEEeCCCCCceEEEEe--------CCcceeEEEccCCCE
Q psy6442 51 ---------------------------NNTRLISCAEDKTVRLWDVSASAEVQKLEF--------GAVPNSLEISRDGTT 95 (231)
Q Consensus 51 ---------------------------~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~--------~~~~~~v~~~~~~~~ 95 (231)
++..++++|.|+|||+||++-..++.++.. ...+..|+..|.|+.
T Consensus 166 y~tdc~~g~~~~a~sghtghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrl 245 (350)
T KOG0641|consen 166 YITDCGRGQGFHALSGHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRL 245 (350)
T ss_pred EEeecCCCCcceeecCCcccEEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcce
Confidence 778899999999999999999988887742 145789999999999
Q ss_pred EEEEc-CCeEEEEECCCcceEEeeec-cceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCccee-----eeccCCCCCe
Q psy6442 96 ITVTH-GSCVTFLDANSLELIKEHKV-PAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEI-----ESFKGHFGPI 168 (231)
Q Consensus 96 ~~~~~-~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~-----~~~~~h~~~V 168 (231)
++.+. ++...++|++....++.+-. ...+.++.+ +|....+++++.|..|++-|+. |.+. -..-.|+..+
T Consensus 246 l~sg~~dssc~lydirg~r~iq~f~phsadir~vrf--sp~a~yllt~syd~~ikltdlq-gdla~el~~~vv~ehkdk~ 322 (350)
T KOG0641|consen 246 LASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRF--SPGAHYLLTCSYDMKIKLTDLQ-GDLAHELPIMVVAEHKDKA 322 (350)
T ss_pred eeeccCCCceEEEEeeCCceeeeeCCCccceeEEEe--CCCceEEEEecccceEEEeecc-cchhhcCceEEEEeccCce
Confidence 88765 56778899998888877543 346666555 8888899999999999999874 2222 2234699999
Q ss_pred eEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 169 HCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 169 ~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
..+.|+|+.--++|.+.|+++.+|-+
T Consensus 323 i~~rwh~~d~sfisssadkt~tlwa~ 348 (350)
T KOG0641|consen 323 IQCRWHPQDFSFISSSADKTATLWAL 348 (350)
T ss_pred EEEEecCccceeeeccCcceEEEecc
Confidence 99999999999999999999999975
No 97
>KOG0301|consensus
Probab=99.78 E-value=5.6e-18 Score=143.71 Aligned_cols=187 Identities=21% Similarity=0.327 Sum_probs=144.2
Q ss_pred CCcCCCceeeeccCCCeEe--eeecccccEEE-EEECC-CCceeEeccccccc--------------------------c
Q psy6442 1 MCVDGKPMLRQGDTGDWIG--TFEGHKGCVWG-VDINK-DASKAASGAADFQA--------------------------K 50 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~--~l~gH~~~V~~-~~~~~-~~~~~~s~~~d~~~--------------------------~ 50 (231)
+|-||++++|+...++++. .+.+|.+.|.. +.+.+ ++-.+..|+.|-.+ .
T Consensus 31 ~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~ 110 (745)
T KOG0301|consen 31 GSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIG 110 (745)
T ss_pred cCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEEecCCCCchhhhhccccceeeeecC
Confidence 4679999999987777655 47889998877 66654 44457777776332 1
Q ss_pred CCCEEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccce-eEEEE
Q psy6442 51 NNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQ-VHSAS 128 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~ 128 (231)
+...++|+|+|.|+|+|.... +...++ +...+..+..-|++.++..+.|..|++|.. ...++++..+.. ++.++
T Consensus 111 ~~~~~iSgSWD~TakvW~~~~--l~~~l~gH~asVWAv~~l~e~~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~ 186 (745)
T KOG0301|consen 111 EDGTLISGSWDSTAKVWRIGE--LVYSLQGHTASVWAVASLPENTYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLA 186 (745)
T ss_pred CcCceEecccccceEEecchh--hhcccCCcchheeeeeecCCCcEEeccCcceeeeccC--CchhhhhccchhheeeeE
Confidence 345599999999999997753 333333 566788999999997777788999999986 445566655543 44444
Q ss_pred EEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCC
Q psy6442 129 LLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 129 ~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~ 195 (231)
+. ++ ..+++++.|+.|++|++ +++.+.++.||+.-|.+++..+++..++|+++|+++|||+..
T Consensus 187 vl--~~-~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~ 249 (745)
T KOG0301|consen 187 VL--DD-SHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD 249 (745)
T ss_pred Ee--cC-CCeEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC
Confidence 42 22 23788999999999999 788899999999999999988999999999999999999975
No 98
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.78 E-value=2.2e-16 Score=127.62 Aligned_cols=202 Identities=13% Similarity=0.151 Sum_probs=142.7
Q ss_pred CcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeC
Q psy6442 2 CVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFG 81 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~ 81 (231)
+.|+.+++|+..+++.+..+..|.+ +..+.|+|+++.+ +++++.|+++++||+++++.+..+...
T Consensus 50 ~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~~l--------------~~~~~~~~~l~~~d~~~~~~~~~~~~~ 114 (300)
T TIGR03866 50 SDSDTIQVIDLATGEVIGTLPSGPD-PELFALHPNGKIL--------------YIANEDDNLVTVIDIETRKVLAEIPVG 114 (300)
T ss_pred CCCCeEEEEECCCCcEEEeccCCCC-ccEEEECCCCCEE--------------EEEcCCCCeEEEEECCCCeEEeEeeCC
Confidence 4578999999999999888776554 4567888876542 355667899999999988777777666
Q ss_pred CcceeEEEccCCCEEEEEcC--CeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEE-EecCCCeEEEEeCCCccee
Q psy6442 82 AVPNSLEISRDGTTITVTHG--SCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFV-CGGEDLKMYKFDYSTGAEI 158 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~d~~i~~~d~~~~~~~ 158 (231)
..+..++++|++..++++.. ..+.+||..+............... +.+++++..++ ++..++.+++||+.+++.+
T Consensus 115 ~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~ 192 (300)
T TIGR03866 115 VEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVDQRPRF--AEFTADGKELWVSSEIGGTVSVIDVATRKVI 192 (300)
T ss_pred CCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcCCCccE--EEECCCCCEEEEEcCCCCEEEEEEcCcceee
Confidence 66789999999998876543 3567788877665544433333333 33478888765 4456899999999988776
Q ss_pred eeccCCC-----C--CeeEEEEcCCCCEE-EEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCccccc
Q psy6442 159 ESFKGHF-----G--PIHCVKFSPDGELY-ASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGHL 222 (231)
Q Consensus 159 ~~~~~h~-----~--~V~~v~~spd~~~l-aS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (231)
..+..+. . ....++|+|+++++ ++.+.++.|.+||.++++...... .......+++.++|+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~ 262 (300)
T TIGR03866 193 KKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLL--VGQRVWQLAFTPDEKY 262 (300)
T ss_pred eeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE--eCCCcceEEECCCCCE
Confidence 6554221 1 23468899999874 445667789999999888765443 2334556677777764
No 99
>KOG0308|consensus
Probab=99.77 E-value=1.2e-17 Score=140.80 Aligned_cols=181 Identities=19% Similarity=0.213 Sum_probs=145.9
Q ss_pred CCcCCCceeeeccCC--CeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCc--eE
Q psy6442 1 MCVDGKPMLRQGDTG--DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAE--VQ 76 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g--~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~--~~ 76 (231)
+|-|-+|.+|++..+ -++.+++.|++.|.+++... .++..+||||-|+.|++||+.++.. +.
T Consensus 91 ~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~a--------------k~~~lvaSgGLD~~IflWDin~~~~~l~~ 156 (735)
T KOG0308|consen 91 ASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIA--------------KNNELVASGGLDRKIFLWDINTGTATLVA 156 (735)
T ss_pred ecCCceEEEeecccCcchhHhhhhcccchheeeeecc--------------cCceeEEecCCCccEEEEEccCcchhhhh
Confidence 477899999999877 57889999999999998732 2356689999999999999987733 21
Q ss_pred EE---E-------eCCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeeccc-eeEEEEEEecCCCCEEEEecCC
Q psy6442 77 KL---E-------FGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVPA-QVHSASLLLNSERPIFVCGGED 144 (231)
Q Consensus 77 ~~---~-------~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d 144 (231)
.. . ....+++++..+.+..++.+ ..+.+++||.++.+.+-..+.+. .+.. +..+++|..+++++.|
T Consensus 157 s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~--ll~~dDGt~~ls~sSD 234 (735)
T KOG0308|consen 157 SFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRV--LLVNDDGTRLLSASSD 234 (735)
T ss_pred hccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccceEE--EEEcCCCCeEeecCCC
Confidence 11 1 12467899999988544433 45799999999877665555433 3433 3458899999999999
Q ss_pred CeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCC
Q psy6442 145 LKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 145 ~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~ 197 (231)
++|++||+....++.++..|+..|+++..+|+-..+.+|+.||.|..=|+++.
T Consensus 235 gtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 235 GTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred ceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCc
Confidence 99999999999999999999999999999999999999999999998888773
No 100
>KOG0772|consensus
Probab=99.77 E-value=1.6e-17 Score=137.00 Aligned_cols=191 Identities=17% Similarity=0.195 Sum_probs=135.7
Q ss_pred eeeecccccEEEEEECCCCceeEecccccccc--------------------------------CCCEEEEEeCCCCEEE
Q psy6442 19 GTFEGHKGCVWGVDINKDASKAASGAADFQAK--------------------------------NNTRLISCAEDKTVRL 66 (231)
Q Consensus 19 ~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~--------------------------------~~~~l~s~s~D~ti~i 66 (231)
-.|++|+..|.++.+.|.|..+++|+.|+.+. .+..|+..+..-.+||
T Consensus 161 i~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl 240 (641)
T KOG0772|consen 161 IQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKL 240 (641)
T ss_pred EeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeE
Confidence 45889999999999999988887777765432 4455555666667777
Q ss_pred EeCCCCCceEEEE-------------eCCcceeEEEccCCC--EEEEEcCCeEEEEECCCcc-eEEeeec----cceeEE
Q psy6442 67 WDVSASAEVQKLE-------------FGAVPNSLEISRDGT--TITVTHGSCVTFLDANSLE-LIKEHKV----PAQVHS 126 (231)
Q Consensus 67 wd~~~~~~~~~~~-------------~~~~~~~v~~~~~~~--~~~~~~~~~i~~~d~~~~~-~~~~~~~----~~~~~~ 126 (231)
+|-........+. +-..+++.+|+|..+ ++.++.++++++||....+ .++.++. ...+..
T Consensus 241 ~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~ 320 (641)
T KOG0772|consen 241 LDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPV 320 (641)
T ss_pred EccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCc
Confidence 7754433222221 123567888999876 4556778999999987644 3333332 223333
Q ss_pred EEEEecCCCCEEEEecCCCeEEEEeCCCcc---eeeeccCCCC--CeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCe-e
Q psy6442 127 ASLLLNSERPIFVCGGEDLKMYKFDYSTGA---EIESFKGHFG--PIHCVKFSPDGELYASGSEDGTLRLWQTNVGKT-Y 200 (231)
Q Consensus 127 ~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~---~~~~~~~h~~--~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~-~ 200 (231)
.++.+++++..+|+|..||.|.+|+..... ..+.-.+|.. .|+||+||+||++|+|-+.|+++++||+++.+. .
T Consensus 321 tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL 400 (641)
T KOG0772|consen 321 TSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPL 400 (641)
T ss_pred eeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccch
Confidence 444559999999999999999999975432 2233467877 899999999999999999999999999988764 5
Q ss_pred eeeeccCCc
Q psy6442 201 GLWKCIEGG 209 (231)
Q Consensus 201 ~~~~~~~~~ 209 (231)
..|++.++.
T Consensus 401 ~~~tgL~t~ 409 (641)
T KOG0772|consen 401 NVRTGLPTP 409 (641)
T ss_pred hhhcCCCcc
Confidence 556555443
No 101
>KOG4283|consensus
Probab=99.77 E-value=4.1e-17 Score=126.54 Aligned_cols=162 Identities=20% Similarity=0.331 Sum_probs=123.4
Q ss_pred ecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCC------------ceEEEE----eCCcce
Q psy6442 22 EGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASA------------EVQKLE----FGAVPN 85 (231)
Q Consensus 22 ~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~------------~~~~~~----~~~~~~ 85 (231)
+.|.|.|.++++.+- .+++++|++.||.|.+||++... |+...+ +...+.
T Consensus 40 r~HgGsvNsL~id~t--------------egrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~is 105 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLT--------------EGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAIS 105 (397)
T ss_pred ccCCCccceeeeccc--------------cceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeee
Confidence 457777777776653 46789999999999999996432 110111 234567
Q ss_pred eEEEccCCCEEEE--EcCCeEEEEECCCcceEEeeeccceeEEEEEEecC-CCCEEEEecCCCeEEEEeCCCcceeeecc
Q psy6442 86 SLEISRDGTTITV--THGSCVTFLDANSLELIKEHKVPAQVHSASLLLNS-ERPIFVCGGEDLKMYKFDYSTGAEIESFK 162 (231)
Q Consensus 86 ~v~~~~~~~~~~~--~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~d~~i~~~d~~~~~~~~~~~ 162 (231)
++.|-|-+.-++. +.+-++++||.++.+..-.++.+..+..-.+.+-. ...++|+|..+..|++.|+.+|...+++.
T Consensus 106 s~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~Ls 185 (397)
T KOG4283|consen 106 SAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLS 185 (397)
T ss_pred eeEEeeecCceeecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeec
Confidence 7788776554444 45789999999998888888887766554442222 24467788888999999999999999999
Q ss_pred CCCCCeeEEEEcCCCC-EEEEeeCCCcEEEEeCCCC
Q psy6442 163 GHFGPIHCVKFSPDGE-LYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 163 ~h~~~V~~v~~spd~~-~laS~s~d~~v~iwd~~~~ 197 (231)
||.+.|.+|.|+|... .|++|+.||.||+||++.-
T Consensus 186 GHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRra 221 (397)
T KOG4283|consen 186 GHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRA 221 (397)
T ss_pred cccCceEEEEeccCceeEEEecCCCceEEEEEeecc
Confidence 9999999999999865 6899999999999998654
No 102
>KOG0270|consensus
Probab=99.76 E-value=1.9e-17 Score=134.11 Aligned_cols=162 Identities=23% Similarity=0.343 Sum_probs=128.2
Q ss_pred cccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCCEEEE--E
Q psy6442 23 GHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITV--T 99 (231)
Q Consensus 23 gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~--~ 99 (231)
+|++.|.++.|+..- -..|+|+|.|.||++||+.++++..++. +...+.+++|+|....++. +
T Consensus 241 gHTdavl~Ls~n~~~--------------~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs 306 (463)
T KOG0270|consen 241 GHTDAVLALSWNRNF--------------RNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGS 306 (463)
T ss_pred cchHHHHHHHhcccc--------------ceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEecc
Confidence 788888888887653 3469999999999999999999999987 6789999999998775544 4
Q ss_pred cCCeEEEEECCCcce-EEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc-ceeeeccCCCCCeeEEEEcCC-
Q psy6442 100 HGSCVTFLDANSLEL-IKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG-AEIESFKGHFGPIHCVKFSPD- 176 (231)
Q Consensus 100 ~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~-~~~~~~~~h~~~V~~v~~spd- 176 (231)
.++++.+.|.+.... -...+...++..+.|..+. ...+.++..||+++-+|.+.. +++.++++|.++|.++++++.
T Consensus 307 ~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~s-e~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~ 385 (463)
T KOG0270|consen 307 YDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHS-ENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQT 385 (463)
T ss_pred ccceEEeeeccCccccCceEEeccceEEEEecCCC-ceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCC
Confidence 579999999885322 2334445556555663332 234667789999999999864 889999999999999999996
Q ss_pred CCEEEEeeCCCcEEEEeCCCCCe
Q psy6442 177 GELYASGSEDGTLRLWQTNVGKT 199 (231)
Q Consensus 177 ~~~laS~s~d~~v~iwd~~~~~~ 199 (231)
..++++++.|+.|++|++..-.+
T Consensus 386 p~~l~t~s~d~~Vklw~~~~~~~ 408 (463)
T KOG0270|consen 386 PGLLSTASTDKVVKLWKFDVDSP 408 (463)
T ss_pred CcceeeccccceEEEEeecCCCC
Confidence 56899999999999999854443
No 103
>KOG0264|consensus
Probab=99.76 E-value=3.4e-17 Score=132.88 Aligned_cols=180 Identities=19% Similarity=0.234 Sum_probs=136.9
Q ss_pred CCcCCCceeeeccCCCe-------EeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCC--
Q psy6442 1 MCVDGKPMLRQGDTGDW-------IGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSA-- 71 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~-------i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~-- 71 (231)
++.|+++.+|+...... ...+.+|++.|-.++|++- +...+++++.|+.+.|||+++
T Consensus 196 ~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~--------------h~~lF~sv~dd~~L~iwD~R~~~ 261 (422)
T KOG0264|consen 196 GSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPL--------------HEDLFGSVGDDGKLMIWDTRSNT 261 (422)
T ss_pred ccCCCcEEEEeccccccCCccccceEEeecCCcceehhhcccc--------------chhhheeecCCCeEEEEEcCCCC
Confidence 57899999999854432 4558899999999999874 355689999999999999995
Q ss_pred CCceEEEE-eCCcceeEEEccCCCEEEEE--cCCeEEEEECCCcce-EEeeecc-ceeEEEEEEecCCCCEEEEecCCCe
Q psy6442 72 SAEVQKLE-FGAVPNSLEISRDGTTITVT--HGSCVTFLDANSLEL-IKEHKVP-AQVHSASLLLNSERPIFVCGGEDLK 146 (231)
Q Consensus 72 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~~--~~~~i~~~d~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~d~~ 146 (231)
.++..... +...+++++|+|-+..++++ .++++.+||+++... +..+..+ ..+..+.+++ ....++++.+.|++
T Consensus 262 ~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSP-h~etvLASSg~D~r 340 (422)
T KOG0264|consen 262 SKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSP-HNETVLASSGTDRR 340 (422)
T ss_pred CCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCC-CCCceeEecccCCc
Confidence 34444433 46789999999988766553 478999999987654 3333332 3455555532 24567889999999
Q ss_pred EEEEeCCCc--------------ceeeeccCCCCCeeEEEEcCCC-CEEEEeeCCCcEEEEeCC
Q psy6442 147 MYKFDYSTG--------------AEIESFKGHFGPIHCVKFSPDG-ELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 147 i~~~d~~~~--------------~~~~~~~~h~~~V~~v~~spd~-~~laS~s~d~~v~iwd~~ 195 (231)
+.+||+..- +++...-||++.|..+.|+|.. ..++|.++|+.+.||+..
T Consensus 341 l~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 341 LNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred EEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 999998532 1235556999999999999975 578999999999999864
No 104
>KOG0288|consensus
Probab=99.76 E-value=3.3e-17 Score=131.75 Aligned_cols=173 Identities=17% Similarity=0.257 Sum_probs=139.0
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF 80 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~ 80 (231)
++.|-++++||...+.+..++-.- ..+..+..+ ...++|+-.|++||+||.++..++..++.
T Consensus 279 gs~DRtiK~WDl~k~~C~kt~l~~-S~cnDI~~~-----------------~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~ 340 (459)
T KOG0288|consen 279 GSADRTIKLWDLQKAYCSKTVLPG-SQCNDIVCS-----------------ISDVISGHFDKKVRFWDIRSADKTRSVPL 340 (459)
T ss_pred ccccchhhhhhhhhhheecccccc-ccccceEec-----------------ceeeeecccccceEEEeccCCceeeEeec
Confidence 467888889998878777775432 222333222 23478899999999999999999999999
Q ss_pred CCcceeEEEccCCCEEEE-EcCCeEEEEECCCcceEEeeecc-----ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCC
Q psy6442 81 GAVPNSLEISRDGTTITV-THGSCVTFLDANSLELIKEHKVP-----AQVHSASLLLNSERPIFVCGGEDLKMYKFDYST 154 (231)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~ 154 (231)
++.++++..++++..+.. +.++.+.++|.++.+....+..+ ....... ++|++.++++|+.|+.+++|++.+
T Consensus 341 gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvv--fSpd~~YvaAGS~dgsv~iW~v~t 418 (459)
T KOG0288|consen 341 GGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVV--FSPDGSYVAAGSADGSVYIWSVFT 418 (459)
T ss_pred CcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeE--ECCCCceeeeccCCCcEEEEEccC
Confidence 999999999999987665 46889999999998877766543 2233333 499999999999999999999999
Q ss_pred cceeeeccCCCC--CeeEEEEcCCCCEEEEeeCCCcEEEEe
Q psy6442 155 GAEIESFKGHFG--PIHCVKFSPDGELYASGSEDGTLRLWQ 193 (231)
Q Consensus 155 ~~~~~~~~~h~~--~V~~v~~spd~~~laS~s~d~~v~iwd 193 (231)
+++...+..... .|++++|+|.|..|++++.++.+.+|.
T Consensus 419 gKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 419 GKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred ceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 998877764443 599999999999999999999999994
No 105
>KOG0268|consensus
Probab=99.75 E-value=1.6e-17 Score=131.70 Aligned_cols=146 Identities=22% Similarity=0.406 Sum_probs=112.9
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEE-cCCeEEEEECCCcce-EEeeeccceeEEEEE
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLEL-IKEHKVPAQVHSASL 129 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~ 129 (231)
...|++|+.|++|.+||++...++.++......+.++|+|..-.+.++ .|-++..+|.+..+. +..+..... -...+
T Consensus 200 TsILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvs-AV~dV 278 (433)
T KOG0268|consen 200 TSILASCASDRSIVLYDLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVS-AVMDV 278 (433)
T ss_pred chheeeeccCCceEEEecccCCccceeeeeccccceecCccccceeeccccccceehhhhhhcccchhhcccce-eEEEe
Confidence 456999999999999999999999999999999999999966555444 466888898776442 333333321 12345
Q ss_pred EecCCCCEEEEecCCCeEEEEeCCCcceeeec-cCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCC
Q psy6442 130 LLNSERPIFVCGGEDLKMYKFDYSTGAEIESF-KGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 130 ~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~-~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~ 198 (231)
.++|.|+.+++|+.|.+|++|....+..-..+ ......|.+|.||.|.++++|||+|+.||+|......
T Consensus 279 dfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Ase 348 (433)
T KOG0268|consen 279 DFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASE 348 (433)
T ss_pred ccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecchhh
Confidence 56999999999999999999998765443332 1223569999999999999999999999999975443
No 106
>KOG0321|consensus
Probab=99.75 E-value=5.1e-17 Score=136.88 Aligned_cols=196 Identities=19% Similarity=0.278 Sum_probs=146.7
Q ss_pred CcCCCceeeeccCCCeEee--eecccccEEEEEECCCC-ceeEecccccccc----------------------------
Q psy6442 2 CVDGKPMLRQGDTGDWIGT--FEGHKGCVWGVDINKDA-SKAASGAADFQAK---------------------------- 50 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~--l~gH~~~V~~~~~~~~~-~~~~s~~~d~~~~---------------------------- 50 (231)
+-|.++++||+++++++.. +.||++.|-+++|.+.. ..+.+|+.|+.+.
T Consensus 119 sGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~pt 198 (720)
T KOG0321|consen 119 SGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPT 198 (720)
T ss_pred cCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCC
Confidence 5689999999999999887 99999999999999865 5677887765432
Q ss_pred -----------------------------CCCEEEEEeC-CCCEEEEeCCCCCceEEEE------eC------CcceeEE
Q psy6442 51 -----------------------------NNTRLISCAE-DKTVRLWDVSASAEVQKLE------FG------AVPNSLE 88 (231)
Q Consensus 51 -----------------------------~~~~l~s~s~-D~ti~iwd~~~~~~~~~~~------~~------~~~~~v~ 88 (231)
|+..|||||. |++||+||+++..+....+ +. -.+.++.
T Consensus 199 pskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~ 278 (720)
T KOG0321|consen 199 PSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLI 278 (720)
T ss_pred CCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEE
Confidence 7788999999 9999999998765532221 11 1244666
Q ss_pred EccCCCEEEEEc-CCeEEEEECCCcce--EEeeeccc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcce-eeeccC
Q psy6442 89 ISRDGTTITVTH-GSCVTFLDANSLEL--IKEHKVPA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAE-IESFKG 163 (231)
Q Consensus 89 ~~~~~~~~~~~~-~~~i~~~d~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~-~~~~~~ 163 (231)
....|..+++++ |+.|.+|+...... ...+.... .-....-..++++..+++|+.|...++|.+..-+. ...+.|
T Consensus 279 lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~G 358 (720)
T KOG0321|consen 279 LDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLG 358 (720)
T ss_pred ecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhC
Confidence 677778888764 88999999875432 22222211 11111222478999999999999999999876543 456789
Q ss_pred CCCCeeEEEEcCCC-CEEEEeeCCCcEEEEeCCCC
Q psy6442 164 HFGPIHCVKFSPDG-ELYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 164 h~~~V~~v~~spd~-~~laS~s~d~~v~iwd~~~~ 197 (231)
|.-.|++++|.|.. .-+++|++|..++||++..+
T Consensus 359 ht~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~ 393 (720)
T KOG0321|consen 359 HTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNG 393 (720)
T ss_pred cceEEEEEeeccccCCCceeeccCcceEEEeccCc
Confidence 99999999999964 46888899999999998544
No 107
>KOG2445|consensus
Probab=99.75 E-value=2.8e-16 Score=122.45 Aligned_cols=182 Identities=18% Similarity=0.397 Sum_probs=124.4
Q ss_pred CCcCCCceeeec--cCCC--eEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCC--Cc
Q psy6442 1 MCVDGKPMLRQG--DTGD--WIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSAS--AE 74 (231)
Q Consensus 1 ~~~d~~~~~~~~--~~g~--~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~--~~ 74 (231)
|+.|.+|.+|+. .+|. +...++.|.+.|+.+.|.+- .-|+.+++||.|++++||..... +.
T Consensus 31 CSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhP-------------EfGqvvA~cS~Drtv~iWEE~~~~~~~ 97 (361)
T KOG2445|consen 31 CSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHP-------------EFGQVVATCSYDRTVSIWEEQEKSEEA 97 (361)
T ss_pred ccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCc-------------cccceEEEEecCCceeeeeeccccccc
Confidence 688999999994 4555 45669999999999999763 23778999999999999976311 11
Q ss_pred -----e--EEE-EeCCcceeEEEccCCC--EE-EEEcCCeEEEEECCCcceEE------eee--------ccceeEEEEE
Q psy6442 75 -----V--QKL-EFGAVPNSLEISRDGT--TI-TVTHGSCVTFLDANSLELIK------EHK--------VPAQVHSASL 129 (231)
Q Consensus 75 -----~--~~~-~~~~~~~~v~~~~~~~--~~-~~~~~~~i~~~d~~~~~~~~------~~~--------~~~~~~~~~~ 129 (231)
+ .++ .....++++.|.|... .+ .++.++.+++|+..+.-.+. ++. ...+..++++
T Consensus 98 ~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsW 177 (361)
T KOG2445|consen 98 HGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSW 177 (361)
T ss_pred ccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEee
Confidence 1 111 2346899999999765 33 34568999999865433222 111 1123334444
Q ss_pred EecCC-CCEEEEecCC-----CeEEEEeCCCc--c--eeeeccCCCCCeeEEEEcCC-C---CEEEEeeCCCcEEEEeCC
Q psy6442 130 LLNSE-RPIFVCGGED-----LKMYKFDYSTG--A--EIESFKGHFGPIHCVKFSPD-G---ELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 130 ~~~~~-~~~~~~g~~d-----~~i~~~d~~~~--~--~~~~~~~h~~~V~~v~~spd-~---~~laS~s~d~~v~iwd~~ 195 (231)
..+.. .+.++.|+.+ ..+++|..... + .+.++.+|+.+|++++|.|+ | ++||+++.|| |+||+++
T Consensus 178 n~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~ 256 (361)
T KOG2445|consen 178 NPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVK 256 (361)
T ss_pred ccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEe
Confidence 32222 3456666554 35666655432 2 35678899999999999997 3 5899999999 9999987
Q ss_pred C
Q psy6442 196 V 196 (231)
Q Consensus 196 ~ 196 (231)
.
T Consensus 257 ~ 257 (361)
T KOG2445|consen 257 V 257 (361)
T ss_pred e
Confidence 4
No 108
>KOG0307|consensus
Probab=99.74 E-value=5e-18 Score=150.79 Aligned_cols=203 Identities=19% Similarity=0.276 Sum_probs=148.5
Q ss_pred CCcCCCceeeeccC---C---CeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCc
Q psy6442 1 MCVDGKPMLRQGDT---G---DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAE 74 (231)
Q Consensus 1 ~~~d~~~~~~~~~~---g---~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~ 74 (231)
|.+||+|-||++.. + ..+.+++.|+|.|..++|++.. +..|++|+.||.|.|||+..-+.
T Consensus 86 G~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q--------------~nlLASGa~~geI~iWDlnn~~t 151 (1049)
T KOG0307|consen 86 GLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQ--------------GNLLASGADDGEILIWDLNKPET 151 (1049)
T ss_pred cccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccC--------------CceeeccCCCCcEEEeccCCcCC
Confidence 57899999999854 2 3588899999999999999863 44689999999999999976433
Q ss_pred eEEE---EeCCcceeEEEccCCCEEEEE--cCCeEEEEECCCcceEEeeec-cceeEEEEEEecCCCC-EEEEecC-C--
Q psy6442 75 VQKL---EFGAVPNSLEISRDGTTITVT--HGSCVTFLDANSLELIKEHKV-PAQVHSASLLLNSERP-IFVCGGE-D-- 144 (231)
Q Consensus 75 ~~~~---~~~~~~~~v~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~g~~-d-- 144 (231)
-.+. .....|.+++|...-..++++ ..+...+||++..+.+-.... .....+..+.++|+.. .++.+++ |
T Consensus 152 P~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~ 231 (1049)
T KOG0307|consen 152 PFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSA 231 (1049)
T ss_pred CCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCC
Confidence 2221 234578899998877665554 356899999987765443332 2223333344466543 2344433 3
Q ss_pred CeEEEEeCCC-cceeeeccCCCCCeeEEEEcCCC-CEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCc
Q psy6442 145 LKMYKFDYST-GAEIESFKGHFGPIHCVKFSPDG-ELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDS 218 (231)
Q Consensus 145 ~~i~~~d~~~-~~~~~~~~~h~~~V~~v~~spd~-~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (231)
-.|.+||++. ...++++++|...|.++.|++.+ ++|+|++.|+.|.+|+.++++....+-. .+.|++.+.|-+
T Consensus 232 PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~-~~nW~fdv~w~p 306 (1049)
T KOG0307|consen 232 PVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPA-QGNWCFDVQWCP 306 (1049)
T ss_pred ceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCC-CCcceeeeeecC
Confidence 3699999975 45678889999999999999976 8999999999999999999998766654 556666665544
No 109
>KOG0639|consensus
Probab=99.74 E-value=2.3e-17 Score=135.83 Aligned_cols=176 Identities=25% Similarity=0.321 Sum_probs=144.3
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF 80 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~ 80 (231)
|+.||+|++||.....+++.|+||++.+.|++++++| ..|-|++-|.+||-||++.++.+..-.+
T Consensus 527 ccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dG---------------tklWTGGlDntvRcWDlregrqlqqhdF 591 (705)
T KOG0639|consen 527 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDG---------------TKLWTGGLDNTVRCWDLREGRQLQQHDF 591 (705)
T ss_pred eccCCcEEEEEcccceeeecccCCCCCceeEEecCCC---------------ceeecCCCccceeehhhhhhhhhhhhhh
Confidence 5789999999999999999999999999999999974 4589999999999999999998888888
Q ss_pred CCcceeEEEccCCCEEEEEcC-CeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceee
Q psy6442 81 GAVPNSLEISRDGTTITVTHG-SCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIE 159 (231)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~~~~-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~ 159 (231)
..+++++..+|.+..++++.. +.+.+......+....+- .....+++.+.+-++.+++.+.|.-+-.|.+.-|..+.
T Consensus 592 ~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhl--heScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiF 669 (705)
T KOG0639|consen 592 SSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHL--HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF 669 (705)
T ss_pred hhhheecccCCCccceeeecccCcEEEEecCCccceeecc--cccEEEEEEecccCceeeecCchhhhhhccCcccccee
Confidence 899999999999999998864 455555443332221111 12223444557889999999999999999888887776
Q ss_pred eccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 160 SFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 160 ~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
..+ ...+|.++.+|.|++++++||.|+...||.+
T Consensus 670 qsk-E~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 670 QSK-ESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred ecc-ccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 655 5678999999999999999999999999875
No 110
>KOG1273|consensus
Probab=99.74 E-value=1.5e-16 Score=124.35 Aligned_cols=180 Identities=14% Similarity=0.225 Sum_probs=139.3
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF 80 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~ 80 (231)
||.||.|.+||..|-+.-+.|.+|.-+|.+++|+++|. .|+|+|.|..|++||+..+.++..+.+
T Consensus 41 Gc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr---------------~LltsS~D~si~lwDl~~gs~l~rirf 105 (405)
T KOG1273|consen 41 GCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGR---------------KLLTSSRDWSIKLWDLLKGSPLKRIRF 105 (405)
T ss_pred eccCCcEEEEEccccchhhhhhccccceeEEEecCCCC---------------EeeeecCCceeEEEeccCCCceeEEEc
Confidence 68899999999999999999999999999999999855 478999999999999999999999999
Q ss_pred CCcceeEEEccCCCEEE-EE-cC--CeEEEEECCCcceEEeee-ccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc
Q psy6442 81 GAVPNSLEISRDGTTIT-VT-HG--SCVTFLDANSLELIKEHK-VPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG 155 (231)
Q Consensus 81 ~~~~~~v~~~~~~~~~~-~~-~~--~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~ 155 (231)
..++..+.|+|-....+ +. .. ..+..++-.....+..-. ...........+++.+..+++|...|.+.+++..+-
T Consensus 106 ~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~ 185 (405)
T KOG1273|consen 106 DSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETL 185 (405)
T ss_pred cCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchh
Confidence 99999999999765432 22 22 233333221111111111 111111112235788999999999999999999888
Q ss_pred ceeeeccCCC-CCeeEEEEcCCCCEEEEeeCCCcEEEEeCC
Q psy6442 156 AEIESFKGHF-GPIHCVKFSPDGELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 156 ~~~~~~~~h~-~~V~~v~~spd~~~laS~s~d~~v~iwd~~ 195 (231)
+.++.++--. ..|..+.++..|+.|+.-+.|+.||.|+++
T Consensus 186 e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~ 226 (405)
T KOG1273|consen 186 ECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEIS 226 (405)
T ss_pred eeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehh
Confidence 8877776444 678999999999999999999999999975
No 111
>KOG1539|consensus
Probab=99.74 E-value=3.2e-16 Score=135.54 Aligned_cols=139 Identities=19% Similarity=0.264 Sum_probs=108.3
Q ss_pred CCcceeEEEccCCCEEE-EEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceee
Q psy6442 81 GAVPNSLEISRDGTTIT-VTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIE 159 (231)
Q Consensus 81 ~~~~~~v~~~~~~~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~ 159 (231)
+..+..++...-++.++ ++.+|.+.+||......+...+....+..+.. +....+++.+.+|-.|+++|..+.+..+
T Consensus 493 ~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~--hr~s~l~a~~~ddf~I~vvD~~t~kvvR 570 (910)
T KOG1539|consen 493 KGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVY--HRVSDLLAIALDDFSIRVVDVVTRKVVR 570 (910)
T ss_pred cCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeee--eehhhhhhhhcCceeEEEEEchhhhhhH
Confidence 34455555555444433 34578889999887776666665544443333 4556678888999999999999999999
Q ss_pred eccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCcccccc
Q psy6442 160 SFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGHLN 223 (231)
Q Consensus 160 ~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (231)
.|.||.+.|++++|||||+.|++++.|++||+||+-++..+...- .+.-|.++++.++|-++
T Consensus 571 ~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~--vd~~~~sls~SPngD~L 632 (910)
T KOG1539|consen 571 EFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL--VDSPCTSLSFSPNGDFL 632 (910)
T ss_pred HhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe--cCCcceeeEECCCCCEE
Confidence 999999999999999999999999999999999999998877665 36677888888887654
No 112
>KOG0973|consensus
Probab=99.73 E-value=2e-16 Score=140.08 Aligned_cols=184 Identities=18% Similarity=0.237 Sum_probs=138.4
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE- 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~- 79 (231)
+|.|++|.+|+..+.+++.++++|++.|-.+.|.|-| ++++|-+.|++|+||++.+......+.
T Consensus 147 ~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~G---------------ky~ASqsdDrtikvwrt~dw~i~k~It~ 211 (942)
T KOG0973|consen 147 VSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIG---------------KYFASQSDDRTLKVWRTSDWGIEKSITK 211 (942)
T ss_pred ecccceEEEEccccceeeeeeecccccccceEECCcc---------------CeeeeecCCceEEEEEcccceeeEeecc
Confidence 5789999999999999999999999999999999974 558999999999999988766655553
Q ss_pred -e-----CCcceeEEEccCCCEEEEEc-----CCeEEEEECCCcceEEeeec-cceeEEEEEEec----CC-------C-
Q psy6442 80 -F-----GAVPNSLEISRDGTTITVTH-----GSCVTFLDANSLELIKEHKV-PAQVHSASLLLN----SE-------R- 135 (231)
Q Consensus 80 -~-----~~~~~~v~~~~~~~~~~~~~-----~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~----~~-------~- 135 (231)
+ ......+.|+|||.+++..+ ..++.+.+..+...-..+-. ..++....+.+. +. .
T Consensus 212 pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~ 291 (942)
T KOG0973|consen 212 PFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPN 291 (942)
T ss_pred chhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCC
Confidence 2 23467889999999987532 24788888766554333222 234444443210 00 1
Q ss_pred ---CEEEEecCCCeEEEEeCCCcceeeec-cCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCe
Q psy6442 136 ---PIFVCGGEDLKMYKFDYSTGAEIESF-KGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKT 199 (231)
Q Consensus 136 ---~~~~~g~~d~~i~~~d~~~~~~~~~~-~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~ 199 (231)
.++|+|+.|++|-+|.....+++... +-...+|.+++|+|||..|..||.||+|.+..++....
T Consensus 292 ~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~El 359 (942)
T KOG0973|consen 292 CYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALIHFEEKEL 359 (942)
T ss_pred cceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEEEcchHHh
Confidence 16889999999999998766554332 22346899999999999999999999999999866543
No 113
>KOG0292|consensus
Probab=99.73 E-value=7.5e-17 Score=140.34 Aligned_cols=162 Identities=15% Similarity=0.302 Sum_probs=135.7
Q ss_pred eecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEE-EeCCcceeEEEccCCCEEEEE
Q psy6442 21 FEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKL-EFGAVPNSLEISRDGTTITVT 99 (231)
Q Consensus 21 l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~ 99 (231)
|..-+.+|-+++|+|. -..++++--.|.|.+||.+=+.++..+ ++..++..+.|+|++..++.+
T Consensus 5 fEskSsRvKglsFHP~---------------rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSG 69 (1202)
T KOG0292|consen 5 FESKSSRVKGLSFHPK---------------RPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSG 69 (1202)
T ss_pred hhcccccccceecCCC---------------CCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEec
Confidence 4555778889999986 345788888999999999988887665 478899999999998876654
Q ss_pred c-CCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCC
Q psy6442 100 H-GSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGE 178 (231)
Q Consensus 100 ~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~ 178 (231)
. |-.|++|+-...+++.+...+..... ...+++.-+.++++++|.+|++|+..++.++..+.||...|.|.+|+|...
T Consensus 70 GDDykIkVWnYk~rrclftL~GHlDYVR-t~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptED 148 (1202)
T KOG0292|consen 70 GDDYKIKVWNYKTRRCLFTLLGHLDYVR-TVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTED 148 (1202)
T ss_pred CCccEEEEEecccceehhhhccccceeE-EeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccc
Confidence 4 46899999888888777665554332 233588899999999999999999999999999999999999999999999
Q ss_pred EEEEeeCCCcEEEEeCCCCC
Q psy6442 179 LYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 179 ~laS~s~d~~v~iwd~~~~~ 198 (231)
+++|+|-|.+|||||+.--+
T Consensus 149 lIVSaSLDQTVRVWDisGLR 168 (1202)
T KOG0292|consen 149 LIVSASLDQTVRVWDISGLR 168 (1202)
T ss_pred eEEEecccceEEEEeecchh
Confidence 99999999999999985443
No 114
>KOG4283|consensus
Probab=99.73 E-value=2.8e-16 Score=121.98 Aligned_cols=190 Identities=18% Similarity=0.288 Sum_probs=135.5
Q ss_pred CCcCCCceeeeccCCC------eEeeeecccccEEEEE-ECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCC
Q psy6442 1 MCVDGKPMLRQGDTGD------WIGTFEGHKGCVWGVD-INKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASA 73 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~------~i~~l~gH~~~V~~~~-~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~ 73 (231)
|+.||.+-+||+..-. +++. |. ++ +. -++++.+.+-.+.-|.+.+...+.|+|.|.++|+||..+-+
T Consensus 62 Ggadgsi~v~Dl~n~t~~e~s~li~k---~~-c~--v~~~h~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ 135 (397)
T KOG4283|consen 62 GGADGSIAVFDLQNATDYEASGLIAK---HK-CI--VAKQHENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQ 135 (397)
T ss_pred cCCCccEEEEEeccccchhhccceeh---ee-ee--ccccCCccceeeeeeeEEeeecCceeecccccceEEEeecccce
Confidence 5789999999985432 1211 10 00 10 12233333333333444567889999999999999999988
Q ss_pred ceEEEEeCCcceeEEEccCCC---EEEEE-cCCeEEEEECCCcceEEeeecc-ceeEEEEEEecCCCC-EEEEecCCCeE
Q psy6442 74 EVQKLEFGAVPNSLEISRDGT---TITVT-HGSCVTFLDANSLELIKEHKVP-AQVHSASLLLNSERP-IFVCGGEDLKM 147 (231)
Q Consensus 74 ~~~~~~~~~~~~~v~~~~~~~---~~~~~-~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~g~~d~~i 147 (231)
....+.++..+++-+++|=.. .++++ .+..++++|+.++........+ ..+.++.| +|... .|++|+.|++|
T Consensus 136 ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~W--sp~~e~vLatgsaDg~i 213 (397)
T KOG4283|consen 136 EAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEW--SPSSEWVLATGSADGAI 213 (397)
T ss_pred eeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEe--ccCceeEEEecCCCceE
Confidence 888888888899888888544 33344 3568999999998877665543 35555555 55444 58899999999
Q ss_pred EEEeCCCc-ce--------------eeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCC
Q psy6442 148 YKFDYSTG-AE--------------IESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 148 ~~~d~~~~-~~--------------~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~ 198 (231)
++||++.- .+ +++-.+|.+.|+.++|+.|+.++++++.|..+++|+..+|+
T Consensus 214 rlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 214 RLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGR 279 (397)
T ss_pred EEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCc
Confidence 99998643 11 22234688899999999999999999999999999998886
No 115
>KOG1408|consensus
Probab=99.72 E-value=1.9e-16 Score=135.18 Aligned_cols=170 Identities=18% Similarity=0.277 Sum_probs=133.3
Q ss_pred ccEEEEEECCCCceeEecccccccc------------------------------CCCEEEEEeCCCCEEEEeCCCCCc-
Q psy6442 26 GCVWGVDINKDASKAASGAADFQAK------------------------------NNTRLISCAEDKTVRLWDVSASAE- 74 (231)
Q Consensus 26 ~~V~~~~~~~~~~~~~s~~~d~~~~------------------------------~~~~l~s~s~D~ti~iwd~~~~~~- 74 (231)
-.|.+++.+|+|++|++|..-.+.+ ..+.|+++|.|+-|.|+|+...-.
T Consensus 460 ~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l 539 (1080)
T KOG1408|consen 460 FGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDL 539 (1080)
T ss_pred cceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccch
Confidence 3588999999999999986532221 457799999999999999743100
Q ss_pred ----------e------------EEE-------------E---------------eCCcceeEEEccCCCEEE-EEcCCe
Q psy6442 75 ----------V------------QKL-------------E---------------FGAVPNSLEISRDGTTIT-VTHGSC 103 (231)
Q Consensus 75 ----------~------------~~~-------------~---------------~~~~~~~v~~~~~~~~~~-~~~~~~ 103 (231)
+ +-+ + -...+++++..|..+.++ +..+..
T Consensus 540 ~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrn 619 (1080)
T KOG1408|consen 540 VQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRN 619 (1080)
T ss_pred hhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccc
Confidence 0 000 0 013456777888776544 456889
Q ss_pred EEEEECCCcceEEeeeccc--eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEE
Q psy6442 104 VTFLDANSLELIKEHKVPA--QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYA 181 (231)
Q Consensus 104 i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~la 181 (231)
|+++++.+.++.+.++... .-..+.+..+|.+.++++...|.++-++|..+++++.++.||...|+.+.|++|-+.|+
T Consensus 620 irif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlI 699 (1080)
T KOG1408|consen 620 IRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLI 699 (1080)
T ss_pred eEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccchhhe
Confidence 9999999999998887632 22334455699999999999999999999999999999999999999999999999999
Q ss_pred EeeCCCcEEEEeCC
Q psy6442 182 SGSEDGTLRLWQTN 195 (231)
Q Consensus 182 S~s~d~~v~iwd~~ 195 (231)
|.+.||.|.||.+-
T Consensus 700 SvsgDgCIFvW~lp 713 (1080)
T KOG1408|consen 700 SVSGDGCIFVWKLP 713 (1080)
T ss_pred eecCCceEEEEECc
Confidence 99999999999983
No 116
>KOG0278|consensus
Probab=99.72 E-value=2.7e-17 Score=124.92 Aligned_cols=195 Identities=20% Similarity=0.281 Sum_probs=150.2
Q ss_pred eeecccccEEEEEEC---CCCceeEecccccccc---------------------------CCCEEEEEeCCCCEEEEeC
Q psy6442 20 TFEGHKGCVWGVDIN---KDASKAASGAADFQAK---------------------------NNTRLISCAEDKTVRLWDV 69 (231)
Q Consensus 20 ~l~gH~~~V~~~~~~---~~~~~~~s~~~d~~~~---------------------------~~~~l~s~s~D~ti~iwd~ 69 (231)
+..||+-+|..++|+ |+|-.|++++.|..+. +..+.+|++.|=+.|+||.
T Consensus 9 ~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a 88 (334)
T KOG0278|consen 9 TCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDA 88 (334)
T ss_pred EEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhh
Confidence 458999999999997 5788888887765442 4466889999999999999
Q ss_pred CCCCceEEEEeCCcceeEEEccCCCEEEEE-cCCeEEEEECCCcce-EEeeec-cceeEEEEEEecCCCCEEEEecCCCe
Q psy6442 70 SASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLEL-IKEHKV-PAQVHSASLLLNSERPIFVCGGEDLK 146 (231)
Q Consensus 70 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~d~~ 146 (231)
-++..+..+++.-.+..++|+.|...++.+ ....++++|++..+. ..++.. +..+....| +. ...++++..+|++
T Consensus 89 ~tgdelhsf~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~w-c~-eD~~iLSSadd~t 166 (334)
T KOG0278|consen 89 VTGDELHSFEHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLW-CH-EDKCILSSADDKT 166 (334)
T ss_pred hhhhhhhhhhhhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEE-ec-cCceEEeeccCCc
Confidence 999999999999999999999999887765 456778998775443 333333 233444333 23 4445667699999
Q ss_pred EEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCc
Q psy6442 147 MYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDS 218 (231)
Q Consensus 147 i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (231)
||+||.+++.++++++ -..+|+++.++++|++|.. +..++|++||..+.......+.=-+.-++++.+..
T Consensus 167 VRLWD~rTgt~v~sL~-~~s~VtSlEvs~dG~ilTi-a~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k 236 (334)
T KOG0278|consen 167 VRLWDHRTGTEVQSLE-FNSPVTSLEVSQDGRILTI-AYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKK 236 (334)
T ss_pred eEEEEeccCcEEEEEe-cCCCCcceeeccCCCEEEE-ecCceeEEeccccccceeeccCccccccccccCCC
Confidence 9999999999999886 5678999999999987654 45678999999988877766655566666666554
No 117
>KOG0639|consensus
Probab=99.72 E-value=2.6e-16 Score=129.66 Aligned_cols=224 Identities=18% Similarity=0.240 Sum_probs=179.5
Q ss_pred cCCCceeeeccCC---CeEeeeec--ccccEEEEEECCCCceeEeccccccc----------------------------
Q psy6442 3 VDGKPMLRQGDTG---DWIGTFEG--HKGCVWGVDINKDASKAASGAADFQA---------------------------- 49 (231)
Q Consensus 3 ~d~~~~~~~~~~g---~~i~~l~g--H~~~V~~~~~~~~~~~~~s~~~d~~~---------------------------- 49 (231)
-.|-|++||...- ..+..|.. -...|.++.+.|||+.|+.|+...++
T Consensus 438 GkgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~ 517 (705)
T KOG0639|consen 438 GKGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAI 517 (705)
T ss_pred CCCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhc
Confidence 4567899997422 12444432 24578999999999999988763211
Q ss_pred -cCCCEEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeeccceeEE
Q psy6442 50 -KNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVPAQVHS 126 (231)
Q Consensus 50 -~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~ 126 (231)
.+.+...+|..||.|.|||++....++.++ +..-..++.+++||..+-.+ -|++++-||++....+..+....++..
T Consensus 518 spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQIfS 597 (705)
T KOG0639|consen 518 SPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFS 597 (705)
T ss_pred CCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhhhhee
Confidence 166778899999999999999998888876 45678899999999988765 488999999999988888877766655
Q ss_pred EEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeecc
Q psy6442 127 ASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCI 206 (231)
Q Consensus 127 ~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~ 206 (231)
+. ..|.+..++.|.+.+.+++.... +..-+.+.-|..-|.++.|++-|++++|.+.|+.+..|..--|..+.+-++.
T Consensus 598 Lg--~cP~~dWlavGMens~vevlh~s-kp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE~ 674 (705)
T KOG0639|consen 598 LG--YCPTGDWLAVGMENSNVEVLHTS-KPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKES 674 (705)
T ss_pred cc--cCCCccceeeecccCcEEEEecC-CccceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeecccc
Confidence 44 47899999999999999888763 3445666679999999999999999999999999999999888888888888
Q ss_pred CCcccCCCCCCc-------cccccceeeee
Q psy6442 207 EGGLNNSLGLDS-------SGHLNNVHEVI 229 (231)
Q Consensus 207 ~~~~~~~~~~~~-------~~~~~~~~~~~ 229 (231)
-..+||-|+++. ..|---||+|+
T Consensus 675 SsVlsCDIS~ddkyIVTGSGdkkATVYeV~ 704 (705)
T KOG0639|consen 675 SSVLSCDISFDDKYIVTGSGDKKATVYEVI 704 (705)
T ss_pred CcceeeeeccCceEEEecCCCcceEEEEEe
Confidence 899999999886 34466788876
No 118
>KOG0270|consensus
Probab=99.71 E-value=9.9e-16 Score=124.30 Aligned_cols=185 Identities=18% Similarity=0.237 Sum_probs=137.7
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCc-eEEEE
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAE-VQKLE 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~-~~~~~ 79 (231)
+|.|.||.|||..+|++..++.-|.++|.++.|+|. ....|++||.|++|++.|.+.... -....
T Consensus 262 gsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~--------------~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk 327 (463)
T KOG0270|consen 262 GSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPY--------------EPSVLLSGSYDGTVALKDCRDPSNSGKEWK 327 (463)
T ss_pred cCCCceEEEEEcCCCCcceehhhcCCceeEEEecCC--------------CceEEEeccccceEEeeeccCccccCceEE
Confidence 689999999999999999999999999999999985 356799999999999999985332 34566
Q ss_pred eCCcceeEEEccCCCEE-EE-EcCCeEEEEECCCc-ceEEeeecc-ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc
Q psy6442 80 FGAVPNSLEISRDGTTI-TV-THGSCVTFLDANSL-ELIKEHKVP-AQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG 155 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~~-~~-~~~~~i~~~d~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~ 155 (231)
+...+..++|.|..... ++ ..+|.++.+|.+.. +++.+...+ .++..+++.. ..-.++++++.++.+++|++...
T Consensus 328 ~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~-~~p~~l~t~s~d~~Vklw~~~~~ 406 (463)
T KOG0270|consen 328 FDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNI-QTPGLLSTASTDKVVKLWKFDVD 406 (463)
T ss_pred eccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecC-CCCcceeeccccceEEEEeecCC
Confidence 77889999999987643 33 45789999998876 556655543 3555555532 23346888999999999988543
Q ss_pred c--eeeeccCCCCCeeEEEEcCCC-CEEEEeeCCCcEEEEeCCCCCee
Q psy6442 156 A--EIESFKGHFGPIHCVKFSPDG-ELYASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 156 ~--~~~~~~~h~~~V~~v~~spd~-~~laS~s~d~~v~iwd~~~~~~~ 200 (231)
. ......---+...|.++.|+- -.||.|+..+.++|||+.+...+
T Consensus 407 ~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V 454 (463)
T KOG0270|consen 407 SPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPV 454 (463)
T ss_pred CCcccccccccccceeecccCCCcceEEEecCccceEEEeecccChhH
Confidence 2 222111112346777788875 46788888888999999876543
No 119
>KOG1446|consensus
Probab=99.71 E-value=7.5e-15 Score=114.74 Aligned_cols=191 Identities=15% Similarity=0.142 Sum_probs=151.5
Q ss_pred CcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeC--CCCEEEEeCCCCCceEEEE
Q psy6442 2 CVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAE--DKTVRLWDVSASAEVQKLE 79 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~--D~ti~iwd~~~~~~~~~~~ 79 (231)
+.|.+++|++..+|+.+++...+.=.|..+.|....+ .++-++. |.+||.-++.+.+.++.+.
T Consensus 33 s~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~---------------~~i~sStk~d~tIryLsl~dNkylRYF~ 97 (311)
T KOG1446|consen 33 SEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSN---------------TVIHSSTKEDDTIRYLSLHDNKYLRYFP 97 (311)
T ss_pred cCCCeEEEEEcCCCceeeEeecccccccEEEEecCCc---------------eEEEccCCCCCceEEEEeecCceEEEcC
Confidence 6788999999999999999887666677777766532 3344444 8999999999999999986
Q ss_pred -eCCcceeEEEccCCCEE-EEEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc--
Q psy6442 80 -FGAVPNSLEISRDGTTI-TVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG-- 155 (231)
Q Consensus 80 -~~~~~~~v~~~~~~~~~-~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~-- 155 (231)
+...|++++.+|-+..+ ..+.|+++++||++..++........... ..++|.|.++|.+.....|++||++.-
T Consensus 98 GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi---~AfDp~GLifA~~~~~~~IkLyD~Rs~dk 174 (311)
T KOG1446|consen 98 GHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPI---AAFDPEGLIFALANGSELIKLYDLRSFDK 174 (311)
T ss_pred CCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCcc---eeECCCCcEEEEecCCCeEEEEEecccCC
Confidence 67789999999977654 45678999999999877766665544321 234999999999988889999999753
Q ss_pred ceeeec---cCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcc
Q psy6442 156 AEIESF---KGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGL 210 (231)
Q Consensus 156 ~~~~~~---~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~ 210 (231)
.+..++ ..-..+.+.|.|||||..++-+...+.+.+.|.-.|...+.++...++-
T Consensus 175 gPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~ 232 (311)
T KOG1446|consen 175 GPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAG 232 (311)
T ss_pred CCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCC
Confidence 222333 2456789999999999999999999999999999999988888777665
No 120
>KOG0306|consensus
Probab=99.70 E-value=1.5e-15 Score=130.23 Aligned_cols=176 Identities=16% Similarity=0.278 Sum_probs=143.0
Q ss_pred cCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-eC
Q psy6442 3 VDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FG 81 (231)
Q Consensus 3 ~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~ 81 (231)
..+.+.+|+.+++++++++.. +.+.+..|-|. +.++++|...|.+.++|+.+...+.+++ +.
T Consensus 392 a~~SikiWn~~t~kciRTi~~--~y~l~~~Fvpg---------------d~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHd 454 (888)
T KOG0306|consen 392 AGESIKIWNRDTLKCIRTITC--GYILASKFVPG---------------DRYIVLGTKNGELQVFDLASASLVETIRAHD 454 (888)
T ss_pred CCCcEEEEEccCcceeEEecc--ccEEEEEecCC---------------CceEEEeccCCceEEEEeehhhhhhhhhccc
Confidence 347889999999999999884 48888888886 4568899999999999999988877765 56
Q ss_pred CcceeEEEccCCCEEE-EEcCCeEEEEECCCc--------ceE-----EeeeccceeEEEEEEecCCCCEEEEecCCCeE
Q psy6442 82 AVPNSLEISRDGTTIT-VTHGSCVTFLDANSL--------ELI-----KEHKVPAQVHSASLLLNSERPIFVCGGEDLKM 147 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~-~~~~~~i~~~d~~~~--------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i 147 (231)
..+.+++.+||+.-++ ++.|.++++||..-. +.+ +..+.+..+ .++..+|++++++.+--|.++
T Consensus 455 gaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddv--L~v~~Spdgk~LaVsLLdnTV 532 (888)
T KOG0306|consen 455 GAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDV--LCVSVSPDGKLLAVSLLDNTV 532 (888)
T ss_pred cceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccE--EEEEEcCCCcEEEEEeccCeE
Confidence 7889999999998654 567889999984211 111 222333444 445559999999999999999
Q ss_pred EEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCC
Q psy6442 148 YKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 148 ~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~ 197 (231)
++|=+.+-+-.-.+.||+-||.||.+|||+.+++|||.|++|+||-+.-|
T Consensus 533 kVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFG 582 (888)
T KOG0306|consen 533 KVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFG 582 (888)
T ss_pred EEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccc
Confidence 99988887777788999999999999999999999999999999987544
No 121
>KOG0267|consensus
Probab=99.70 E-value=3.9e-17 Score=139.28 Aligned_cols=170 Identities=21% Similarity=0.280 Sum_probs=143.3
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE- 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~- 79 (231)
++.+|+++|||...++.+++|.||...+.+++|+|-+. +.+++|.|..+++||.+...|.....
T Consensus 88 gsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~---------------~~a~gStdtd~~iwD~Rk~Gc~~~~~s 152 (825)
T KOG0267|consen 88 GSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGE---------------FFASGSTDTDLKIWDIRKKGCSHTYKS 152 (825)
T ss_pred cccCCceeeeehhhhhhhhhhhccccCcceeeeccceE---------------EeccccccccceehhhhccCceeeecC
Confidence 56899999999999999999999999999999999754 46889999999999999888877765
Q ss_pred eCCcceeEEEccCCCEEEEEc-CCeEEEEECCCcceEEeeecc-ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcce
Q psy6442 80 FGAVPNSLEISRDGTTITVTH-GSCVTFLDANSLELIKEHKVP-AQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAE 157 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~~~-~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~ 157 (231)
+...+..+.++|+|+++.... +..+.+||...++...+++.+ .++.... ++|..-++++|+.|.++++||+++-+.
T Consensus 153 ~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle--~hp~e~Lla~Gs~d~tv~f~dletfe~ 230 (825)
T KOG0267|consen 153 HTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLE--FHPLEVLLAPGSSDRTVRFWDLETFEV 230 (825)
T ss_pred CcceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccccc--cCchhhhhccCCCCceeeeeccceeEE
Confidence 345678899999999887765 479999999888888777643 3444333 477788899999999999999998888
Q ss_pred eeeccCCCCCeeEEEEcCCCCEEEEeeCCC
Q psy6442 158 IESFKGHFGPIHCVKFSPDGELYASGSEDG 187 (231)
Q Consensus 158 ~~~~~~h~~~V~~v~~spd~~~laS~s~d~ 187 (231)
+.........|.+++|+|++..+++|....
T Consensus 231 I~s~~~~~~~v~~~~fn~~~~~~~~G~q~s 260 (825)
T KOG0267|consen 231 ISSGKPETDGVRSLAFNPDGKIVLSGEQIS 260 (825)
T ss_pred eeccCCccCCceeeeecCCceeeecCchhh
Confidence 887777788999999999999888887654
No 122
>KOG0640|consensus
Probab=99.70 E-value=1.7e-15 Score=118.41 Aligned_cols=179 Identities=20% Similarity=0.290 Sum_probs=142.0
Q ss_pred CeEeeeecccccEEEEEECCCCceeEecccccccc-----------------------------CCCEEEEEeCCCCEEE
Q psy6442 16 DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK-----------------------------NNTRLISCAEDKTVRL 66 (231)
Q Consensus 16 ~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~-----------------------------~~~~l~s~s~D~ti~i 66 (231)
..|++|-.|.+.|..++|+|....|++++.|..+. .|..|+.+-..-++++
T Consensus 163 PvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rl 242 (430)
T KOG0640|consen 163 PVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRL 242 (430)
T ss_pred ceEeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeE
Confidence 46999999999999999999999999999876543 6778888888899999
Q ss_pred EeCCCCCceEEE----EeCCcceeEEEccCCCE-EEEEcCCeEEEEECCCcceEEeeec-cceeEEEEEEecCCCCEEEE
Q psy6442 67 WDVSASAEVQKL----EFGAVPNSLEISRDGTT-ITVTHGSCVTFLDANSLELIKEHKV-PAQVHSASLLLNSERPIFVC 140 (231)
Q Consensus 67 wd~~~~~~~~~~----~~~~~~~~v~~~~~~~~-~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 140 (231)
||+.+-+|...- ++...+++|.+++.++. +..+.++.|++||.-+.++++++.. +.....++..+..+++++++
T Consensus 243 Ydv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLs 322 (430)
T KOG0640|consen 243 YDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILS 322 (430)
T ss_pred EeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEee
Confidence 999988776443 23467899999999985 4556799999999988888877654 22333334445788999999
Q ss_pred ecCCCeEEEEeCCCcceeeec-------------------------------------------------cCCCCCeeEE
Q psy6442 141 GGEDLKMYKFDYSTGAEIESF-------------------------------------------------KGHFGPIHCV 171 (231)
Q Consensus 141 g~~d~~i~~~d~~~~~~~~~~-------------------------------------------------~~h~~~V~~v 171 (231)
.+.|..+++|++.++..+.++ .||.++++.+
T Consensus 323 SG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i 402 (430)
T KOG0640|consen 323 SGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWI 402 (430)
T ss_pred cCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEE
Confidence 999999999998776543321 2577788888
Q ss_pred EEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 172 KFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 172 ~~spd~~~laS~s~d~~v~iwd~ 194 (231)
.-||.+.-+++|+.|..+|+|--
T Consensus 403 ~HSP~~p~FmTcsdD~raRFWyr 425 (430)
T KOG0640|consen 403 VHSPVEPAFMTCSDDFRARFWYR 425 (430)
T ss_pred EeCCCCCceeeecccceeeeeee
Confidence 88888888888888888888853
No 123
>KOG0300|consensus
Probab=99.70 E-value=7.4e-16 Score=120.81 Aligned_cols=179 Identities=15% Similarity=0.280 Sum_probs=143.3
Q ss_pred CcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCc-eEEEE-
Q psy6442 2 CVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAE-VQKLE- 79 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~-~~~~~- 79 (231)
+-|.+..|||.++|+.+..|.||......+.-+|. ...++|+|.|.|.++||++..-. +..++
T Consensus 291 SWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHpt---------------QrLVvTsSrDtTFRLWDFReaI~sV~VFQG 355 (481)
T KOG0300|consen 291 SWDRTANLWDVETGEVVNILTGHDSELTHCSTHPT---------------QRLVVTSSRDTTFRLWDFREAIQSVAVFQG 355 (481)
T ss_pred eccccceeeeeccCceeccccCcchhccccccCCc---------------ceEEEEeccCceeEeccchhhcceeeeecc
Confidence 55888999999999999999999999888877774 34578999999999999983311 22222
Q ss_pred eCCcceeEEEccCCCEEEEEcCCeEEEEECCCcc-eEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCccee
Q psy6442 80 FGAVPNSLEISRDGTTITVTHGSCVTFLDANSLE-LIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEI 158 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~ 158 (231)
+...++++.|..+.+.+..+.+.++++||++++. ++.+++...+++.+.+ +..+++++...++..|++||+.- ..+
T Consensus 356 HtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNMRsplATIRtdS~~NRvav--s~g~~iIAiPhDNRqvRlfDlnG-~Rl 432 (481)
T KOG0300|consen 356 HTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNMRSPLATIRTDSPANRVAV--SKGHPIIAIPHDNRQVRLFDLNG-NRL 432 (481)
T ss_pred cccceeEEEEecCCceeecCCCceEEEeeeccccCcceeeecCCccceeEe--ecCCceEEeccCCceEEEEecCC-Ccc
Confidence 3467899999999998888889999999998765 5677777777766555 66777899999999999999954 333
Q ss_pred ee-----ccCCCCCeeEEEEcCCCC--EEEEeeCCCcEEEEeCCCCC
Q psy6442 159 ES-----FKGHFGPIHCVKFSPDGE--LYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 159 ~~-----~~~h~~~V~~v~~spd~~--~laS~s~d~~v~iwd~~~~~ 198 (231)
.. -.+|...|+|++|..+.. -|.+|+-|+.+.=|++...+
T Consensus 433 aRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p~ 479 (481)
T KOG0300|consen 433 ARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTPT 479 (481)
T ss_pred ccCCcccccccceeeeeeeccccCcccccccccccceeeeeEecccC
Confidence 33 358999999999998753 68899999999999987653
No 124
>KOG0303|consensus
Probab=99.69 E-value=2.4e-16 Score=126.38 Aligned_cols=153 Identities=19% Similarity=0.265 Sum_probs=113.0
Q ss_pred eeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEE
Q psy6442 20 TFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT 99 (231)
Q Consensus 20 ~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 99 (231)
.+.||+++|..++|+|- ++..|||||.|.+|+||++..+...+.+. .++.. +.+
T Consensus 76 ~v~GHt~~vLDi~w~Pf--------------nD~vIASgSeD~~v~vW~IPe~~l~~~lt--epvv~----------L~g 129 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPF--------------NDCVIASGSEDTKVMVWQIPENGLTRDLT--EPVVE----------LYG 129 (472)
T ss_pred CccCccccccccccCcc--------------CCceeecCCCCceEEEEECCCcccccCcc--cceEE----------Eee
Confidence 35799999999999984 56789999999999999987654432221 11100 111
Q ss_pred cCCeEEEEECCCcceEEeeeccceeEEEEEEecC-CCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCC
Q psy6442 100 HGSCVTFLDANSLELIKEHKVPAQVHSASLLLNS-ERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGE 178 (231)
Q Consensus 100 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~ 178 (231)
+.. .+..+.+ +| ...+|++++.|.+|.+|++.+++.+-++. |...|.++.|+.||.
T Consensus 130 H~r--------------------rVg~V~w--HPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs 186 (472)
T KOG0303|consen 130 HQR--------------------RVGLVQW--HPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGS 186 (472)
T ss_pred cce--------------------eEEEEee--cccchhhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCc
Confidence 111 1222222 22 23457888999999999999999888887 999999999999999
Q ss_pred EEEEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCcccc
Q psy6442 179 LYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGH 221 (231)
Q Consensus 179 ~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (231)
+|++.+.|+.|||||.++++..+.-.++.++-+....|..+|.
T Consensus 187 ~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~ 229 (472)
T KOG0303|consen 187 LLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGK 229 (472)
T ss_pred eeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCc
Confidence 9999999999999999999988766666666555555555544
No 125
>KOG0642|consensus
Probab=99.68 E-value=3.8e-16 Score=129.98 Aligned_cols=198 Identities=24% Similarity=0.365 Sum_probs=139.5
Q ss_pred CCcCCCceeeecc--------CCCeEeeeecccccEEEEEECCCCceeEecccccccc----------------------
Q psy6442 1 MCVDGKPMLRQGD--------TGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK---------------------- 50 (231)
Q Consensus 1 ~~~d~~~~~~~~~--------~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~---------------------- 50 (231)
++.||++.||.+. .-+.+-+|.+|.++|.|++..+.+....+|+.|..++
T Consensus 312 ~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~ 391 (577)
T KOG0642|consen 312 ASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGT 391 (577)
T ss_pred eccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccc
Confidence 4689999999981 1246888999999999999999999999998886432
Q ss_pred ---------------CCCEEEEEeCCCCEEEEeCCCCCceEEE---EeCCcceeEEEccCCCEEEEEcCCeEEEEECCCc
Q psy6442 51 ---------------NNTRLISCAEDKTVRLWDVSASAEVQKL---EFGAVPNSLEISRDGTTITVTHGSCVTFLDANSL 112 (231)
Q Consensus 51 ---------------~~~~l~s~s~D~ti~iwd~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~ 112 (231)
...+|++||.|||+++|....... .++ +-...+.++.+........++ +.....+++.+.
T Consensus 392 l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~~~-s~~~~~~~~~~~ 469 (577)
T KOG0642|consen 392 LLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSVDRTSSRPAHSLA-SFRFGYTSIDDM 469 (577)
T ss_pred eeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccCCcceEeeccchhHhhhh-hcccccccchhh
Confidence 456799999999999999876655 121 112345566554433211111 111111111111
Q ss_pred c---eEEeeec---cce---eEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEe
Q psy6442 113 E---LIKEHKV---PAQ---VHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASG 183 (231)
Q Consensus 113 ~---~~~~~~~---~~~---~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~ 183 (231)
+ .+..+.. +.+ .....+..++...+..++.++..|+.+|..++.+++....|...++++++.|+|.+|+++
T Consensus 470 ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~ 549 (577)
T KOG0642|consen 470 EVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSG 549 (577)
T ss_pred hhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccchheeeccceecceeecCCCceEEee
Confidence 1 1111111 111 111223347788889999999999999999999999999999999999999999999999
Q ss_pred eCCCcEEEEeCCCCCee
Q psy6442 184 SEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 184 s~d~~v~iwd~~~~~~~ 200 (231)
+.|+.|++|........
T Consensus 550 s~d~sv~l~kld~k~~~ 566 (577)
T KOG0642|consen 550 SHDGSVRLWKLDVKTCV 566 (577)
T ss_pred cCCceeehhhccchhee
Confidence 99999999998765543
No 126
>KOG2106|consensus
Probab=99.68 E-value=1.9e-14 Score=118.82 Aligned_cols=190 Identities=19% Similarity=0.334 Sum_probs=150.8
Q ss_pred cCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEecccccccc--------------------------------
Q psy6442 3 VDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK-------------------------------- 50 (231)
Q Consensus 3 ~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~-------------------------------- 50 (231)
.+|++.+|+..+.+..+.-..|.+.|+++..-.+|.++. |+.|..+.
T Consensus 265 S~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllS-GgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~ 343 (626)
T KOG2106|consen 265 SGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLS-GGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDIL 343 (626)
T ss_pred CCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEee-cCccceEEeccccccccccccCchhcCCeeEEecCCCcEE
Confidence 479999999988888777679999999999999988776 76553211
Q ss_pred -----------------------------------CCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCE
Q psy6442 51 -----------------------------------NNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTT 95 (231)
Q Consensus 51 -----------------------------------~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 95 (231)
+..+++||+.|+++++|+ +.+.+.+.....+..++.|+|.+ .
T Consensus 344 vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~~d~~~~~~fhpsg-~ 420 (626)
T KOG2106|consen 344 VGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKIIEDPAECADFHPSG-V 420 (626)
T ss_pred EeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEEecCceeEeeccCcc-e
Confidence 556899999999999999 56667777788899999999999 5
Q ss_pred EEEE-cCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc-ceeeec-cCCCCCeeEEE
Q psy6442 96 ITVT-HGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG-AEIESF-KGHFGPIHCVK 172 (231)
Q Consensus 96 ~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~-~~~~~~-~~h~~~V~~v~ 172 (231)
++++ ..+.-.++|..+...+..+....++....+ +|++.++|.|+.|..|++|.+..+ ...... +-|..+|+.+.
T Consensus 421 va~Gt~~G~w~V~d~e~~~lv~~~~d~~~ls~v~y--sp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLD 498 (626)
T KOG2106|consen 421 VAVGTATGRWFVLDTETQDLVTIHTDNEQLSVVRY--SPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLD 498 (626)
T ss_pred EEEeeccceEEEEecccceeEEEEecCCceEEEEE--cCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEee
Confidence 5554 567778889888777777666556655554 899999999999999999988654 333222 22348999999
Q ss_pred EcCCCCEEEEeeCCCcEEEEeCCCCC
Q psy6442 173 FSPDGELYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 173 ~spd~~~laS~s~d~~v~iwd~~~~~ 198 (231)
||+|+++|.+-+.|-.|-.|....-+
T Consensus 499 wS~Ds~~~~~~S~d~eiLyW~~~~~~ 524 (626)
T KOG2106|consen 499 WSSDSQFLVSNSGDYEILYWKPSECK 524 (626)
T ss_pred ecCCCceEEeccCceEEEEEccccCc
Confidence 99999999999999999999654433
No 127
>KOG0647|consensus
Probab=99.68 E-value=3.1e-15 Score=116.33 Aligned_cols=160 Identities=14% Similarity=0.144 Sum_probs=119.9
Q ss_pred cccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCC-CCceEE--EEeCCcceeEEEccCCCEEEE-
Q psy6442 23 GHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSA-SAEVQK--LEFGAVPNSLEISRDGTTITV- 98 (231)
Q Consensus 23 gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~-~~~~~~--~~~~~~~~~v~~~~~~~~~~~- 98 (231)
.-.+.|..+.|+|.. ...++.+|+|++||+|++.. +....+ ..+..++.+++|+.||..++.
T Consensus 25 pP~DsIS~l~FSP~~--------------~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g 90 (347)
T KOG0647|consen 25 PPEDSISALAFSPQA--------------DNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSG 90 (347)
T ss_pred CcccchheeEecccc--------------CceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEee
Confidence 346788999999842 44577999999999999976 333322 245788999999999998776
Q ss_pred EcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCC
Q psy6442 99 THGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGE 178 (231)
Q Consensus 99 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~ 178 (231)
+.++..++||+.+.+....--...++..+.+.......+|++|++|.+|+.||++...++.+++ -.+.|.++.. -..
T Consensus 91 ~~Dk~~k~wDL~S~Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~-LPeRvYa~Dv--~~p 167 (347)
T KOG0647|consen 91 GCDKQAKLWDLASGQVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ-LPERVYAADV--LYP 167 (347)
T ss_pred ccCCceEEEEccCCCeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeee-ccceeeehhc--cCc
Confidence 4689999999998866554444455666666555556789999999999999999888777765 2334544333 245
Q ss_pred EEEEeeCCCcEEEEeCCCCCe
Q psy6442 179 LYASGSEDGTLRLWQTNVGKT 199 (231)
Q Consensus 179 ~laS~s~d~~v~iwd~~~~~~ 199 (231)
+++.+..++.|.+|+++++..
T Consensus 168 m~vVata~r~i~vynL~n~~t 188 (347)
T KOG0647|consen 168 MAVVATAERHIAVYNLENPPT 188 (347)
T ss_pred eeEEEecCCcEEEEEcCCCcc
Confidence 788888899999999977654
No 128
>KOG1274|consensus
Probab=99.67 E-value=4.8e-15 Score=129.53 Aligned_cols=181 Identities=17% Similarity=0.360 Sum_probs=138.9
Q ss_pred cccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCC-CceEEEE-eCCcceeEEEccCCCEEEEEc
Q psy6442 23 GHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSAS-AEVQKLE-FGAVPNSLEISRDGTTITVTH 100 (231)
Q Consensus 23 gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~-~~~~~~~-~~~~~~~v~~~~~~~~~~~~~ 100 (231)
.|++.-..+.|.|+| ..|+||+.||.|++|+.-.- +.-.++. .+..+.+++.... .++..+.
T Consensus 11 aht~G~t~i~~d~~g---------------efi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~-~f~~~s~ 74 (933)
T KOG1274|consen 11 AHTGGLTLICYDPDG---------------EFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSN-HFLTGSE 74 (933)
T ss_pred hccCceEEEEEcCCC---------------CEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeeccc-ceEEeec
Confidence 577778889999874 46899999999999987544 3223333 4455555554443 4455566
Q ss_pred CCeEEEEECCCcc---eEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCC
Q psy6442 101 GSCVTFLDANSLE---LIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDG 177 (231)
Q Consensus 101 ~~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~ 177 (231)
++++..+....+. .+.++..|. ..+++ +.+|..++.|++|-.|++.++........+.+|.++|.++.|+|.+
T Consensus 75 ~~tv~~y~fps~~~~~iL~Rftlp~--r~~~v--~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~ 150 (933)
T KOG1274|consen 75 QNTVLRYKFPSGEEDTILARFTLPI--RDLAV--SGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKG 150 (933)
T ss_pred cceEEEeeCCCCCccceeeeeeccc--eEEEE--ecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCC
Confidence 7889888766544 345555544 33444 7889999999999999999999888889999999999999999999
Q ss_pred CEEEEeeCCCcEEEEeCCCCCeeeeeeccC-------CcccCCCCCCcc-cccc
Q psy6442 178 ELYASGSEDGTLRLWQTNVGKTYGLWKCIE-------GGLNNSLGLDSS-GHLN 223 (231)
Q Consensus 178 ~~laS~s~d~~v~iwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~ 223 (231)
.+||+.+.||.|+|||++++.....|+.++ +.+++.++|.+. ||++
T Consensus 151 ~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la 204 (933)
T KOG1274|consen 151 NFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLA 204 (933)
T ss_pred CEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEE
Confidence 999999999999999999999887776654 456677888885 5554
No 129
>KOG0294|consensus
Probab=99.67 E-value=8.1e-15 Score=114.64 Aligned_cols=186 Identities=15% Similarity=0.215 Sum_probs=140.6
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE- 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~- 79 (231)
||.|.+++++|..+...+..+..|+|.|.++.|.+... ...|++|+.||.|.+|+..+-.++.++.
T Consensus 59 GssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S-------------~shLlS~sdDG~i~iw~~~~W~~~~slK~ 125 (362)
T KOG0294|consen 59 GSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLS-------------KSHLLSGSDDGHIIIWRVGSWELLKSLKA 125 (362)
T ss_pred cCCCCcEEEEeccchhhhcceeccccceEEEEecCCcc-------------hhheeeecCCCcEEEEEcCCeEEeeeecc
Confidence 58899999999998899999999999999999998532 2258999999999999999988887775
Q ss_pred eCCcceeEEEccCCCE-EEEEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCccee
Q psy6442 80 FGAVPNSLEISRDGTT-ITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEI 158 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~-~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~ 158 (231)
+...++.++++|.++. +.++.|..++.|++-+++.-...+.......+.| .+.+..++.+.. ..|-+|.+.+-...
T Consensus 126 H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w--~~~Gd~F~v~~~-~~i~i~q~d~A~v~ 202 (362)
T KOG0294|consen 126 HKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSW--SPQGDHFVVSGR-NKIDIYQLDNASVF 202 (362)
T ss_pred cccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEE--cCCCCEEEEEec-cEEEEEecccHhHh
Confidence 4567999999999996 4567889999999887776555555444444444 688887776654 34566766554443
Q ss_pred eeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeee
Q psy6442 159 ESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWK 204 (231)
Q Consensus 159 ~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~ 204 (231)
..+. ....+.++-|- ++..|++|.+|+.|++||.....+...+.
T Consensus 203 ~~i~-~~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~~~~~~~~ 246 (362)
T KOG0294|consen 203 REIE-NPKRILCATFL-DGSELLVGGDNEWISLKDTDSDTPLTEFL 246 (362)
T ss_pred hhhh-ccccceeeeec-CCceEEEecCCceEEEeccCCCccceeee
Confidence 3333 22446666663 45688999999999999998877654443
No 130
>KOG4378|consensus
Probab=99.66 E-value=3e-15 Score=123.35 Aligned_cols=201 Identities=15% Similarity=0.184 Sum_probs=153.4
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF 80 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~ 80 (231)
+|..+.|.+||.....+++.|++|+..|.+++.+-. +.+|++++..|-|.|-.+.++.....+.+
T Consensus 97 gG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~---------------DeyiAsvs~gGdiiih~~~t~~~tt~f~~ 161 (673)
T KOG4378|consen 97 GGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNT---------------DEYIASVSDGGDIIIHGTKTKQKTTTFTI 161 (673)
T ss_pred cCcCceeeehhhHHHHHhhhccCCcceeEEEEecCC---------------cceeEEeccCCcEEEEecccCccccceec
Confidence 467889999999877778889999999999998864 45689999999999999999877766665
Q ss_pred C--CcceeEEEccCCCEEE--EEcCCeEEEEECCCcceEEeeec--cceeEEEEEEecCCCCEEEEecCCCeEEEEeCCC
Q psy6442 81 G--AVPNSLEISRDGTTIT--VTHGSCVTFLDANSLELIKEHKV--PAQVHSASLLLNSERPIFVCGGEDLKMYKFDYST 154 (231)
Q Consensus 81 ~--~~~~~v~~~~~~~~~~--~~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~ 154 (231)
+ +.+..+.++|..+.++ +++++.+++||.....++..... ..+...+++. ..+..++++.+.|.+|.+||..+
T Consensus 162 ~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfs-psne~l~vsVG~Dkki~~yD~~s 240 (673)
T KOG4378|consen 162 DSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFS-PSNEALLVSVGYDKKINIYDIRS 240 (673)
T ss_pred CCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceec-CCccceEEEecccceEEEeeccc
Confidence 4 5677899999988654 45779999999887766544322 2334444553 34566788999999999999987
Q ss_pred cceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCC-eeeeeeccCCcccCCCCCCcc
Q psy6442 155 GAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK-TYGLWKCIEGGLNNSLGLDSS 219 (231)
Q Consensus 155 ~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~ 219 (231)
.....++. ...|...|+|+|+|.+|+.|...|.|..||++..+ ++.......+. -..|+|.++
T Consensus 241 ~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~s-Vt~vafq~s 304 (673)
T KOG4378|consen 241 QASTDRLT-YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDAS-VTRVAFQPS 304 (673)
T ss_pred ccccceee-ecCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccc-eeEEEeeec
Confidence 66666554 45689999999999999999999999999998655 45444433322 444555544
No 131
>KOG0772|consensus
Probab=99.66 E-value=2.5e-15 Score=124.17 Aligned_cols=175 Identities=15% Similarity=0.237 Sum_probs=129.7
Q ss_pred CCcCCCceeeeccCC-CeEeeee-----cccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCc
Q psy6442 1 MCVDGKPMLRQGDTG-DWIGTFE-----GHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAE 74 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g-~~i~~l~-----gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~ 74 (231)
++.||++|+|+++.- +.+..++ |-.-++..+.|+++|+ .+|+|..||+|.+|+......
T Consensus 287 ~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~---------------~iAagc~DGSIQ~W~~~~~~v 351 (641)
T KOG0772|consen 287 CSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGK---------------LIAAGCLDGSIQIWDKGSRTV 351 (641)
T ss_pred ecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcc---------------hhhhcccCCceeeeecCCccc
Confidence 589999999999543 4555554 3334688899999854 478888999999999865433
Q ss_pred eEEEE----e--CCcceeEEEccCCCEEEE-EcCCeEEEEECCCcce-EEee-ec--cceeEEEEEEecCCCCEEEEecC
Q psy6442 75 VQKLE----F--GAVPNSLEISRDGTTITV-THGSCVTFLDANSLEL-IKEH-KV--PAQVHSASLLLNSERPIFVCGGE 143 (231)
Q Consensus 75 ~~~~~----~--~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~~-~~~~-~~--~~~~~~~~~~~~~~~~~~~~g~~ 143 (231)
...+. + +..+.++.|+++|+.|+. +.++.+++||++..+. +... .. +.+...+++ +|+.+++++|..
T Consensus 352 ~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~F--SPd~kli~TGtS 429 (641)
T KOG0772|consen 352 RPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCF--SPDDKLILTGTS 429 (641)
T ss_pred ccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCcccc--CCCceEEEeccc
Confidence 22221 2 247899999999998765 5688999999987553 3221 22 233344444 899999988743
Q ss_pred ------CCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEE
Q psy6442 144 ------DLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLW 192 (231)
Q Consensus 144 ------d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iw 192 (231)
.+.++.||..+-..++.+.-..+.|..+.|+|.-+.+..++.||+++|+
T Consensus 430 ~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 430 APNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAGSGDGTAHVY 484 (641)
T ss_pred ccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheeeecCCCceEEE
Confidence 3679999988888888876668889999999998888888889999876
No 132
>KOG4328|consensus
Probab=99.65 E-value=2e-15 Score=122.99 Aligned_cols=177 Identities=19% Similarity=0.248 Sum_probs=126.6
Q ss_pred CCcCCCceeeeccCC----CeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceE
Q psy6442 1 MCVDGKPMLRQGDTG----DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQ 76 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g----~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~ 76 (231)
|..-|+|-||+..+. +-+..+..|+++|.++.|+|. +..++++.|+||+|+.-|+.......
T Consensus 206 GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~--------------n~s~i~ssSyDGtiR~~D~~~~i~e~ 271 (498)
T KOG4328|consen 206 GDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPA--------------NTSQIYSSSYDGTIRLQDFEGNISEE 271 (498)
T ss_pred ccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCC--------------ChhheeeeccCceeeeeeecchhhHH
Confidence 456799999998422 235667899999999999985 45679999999999999998764322
Q ss_pred EEEe---CCcceeEEEccCCCE-EEEEcCCeEEEEECCCcce-EEeeecc-ceeEEEEEEecCCCC-EEEEecCCCeEEE
Q psy6442 77 KLEF---GAVPNSLEISRDGTT-ITVTHGSCVTFLDANSLEL-IKEHKVP-AQVHSASLLLNSERP-IFVCGGEDLKMYK 149 (231)
Q Consensus 77 ~~~~---~~~~~~v~~~~~~~~-~~~~~~~~i~~~d~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~-~~~~g~~d~~i~~ 149 (231)
.+.. .....++.++.+... +++..-+...+||.+.... ......+ .++. .+.++|-.+ ++++++.|.+.++
T Consensus 272 v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~--sv~~NP~~p~~laT~s~D~T~kI 349 (498)
T KOG4328|consen 272 VLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKIT--SVALNPVCPWFLATASLDQTAKI 349 (498)
T ss_pred HhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccc--eeecCCCCchheeecccCcceee
Confidence 2222 123445666666554 4444556889999886554 2222222 1343 344466554 5889999999999
Q ss_pred EeCCCcc-----eeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 150 FDYSTGA-----EIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 150 ~d~~~~~-----~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
||++.-. .+.++ .|..+|+++.|||++-.|++.+.|..|||||.
T Consensus 350 WD~R~l~~K~sp~lst~-~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~ds 398 (498)
T KOG4328|consen 350 WDLRQLRGKASPFLSTL-PHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDS 398 (498)
T ss_pred eehhhhcCCCCcceecc-cccceeeeeEEcCCCCceEeeccCCceEEeec
Confidence 9996521 24444 49999999999999877999999999999998
No 133
>KOG1539|consensus
Probab=99.65 E-value=4.4e-15 Score=128.58 Aligned_cols=175 Identities=19% Similarity=0.348 Sum_probs=145.5
Q ss_pred CcCCCceeeeccCCCeEeee---ecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEE
Q psy6442 2 CVDGKPMLRQGDTGDWIGTF---EGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKL 78 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l---~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~ 78 (231)
...|.+-+++...|-..++| ..|.++|.+++...- ++.++|++.||-+++||...+.....+
T Consensus 467 ~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~---------------n~~~vsa~~~Gilkfw~f~~k~l~~~l 531 (910)
T KOG1539|consen 467 YSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGT---------------NRLLVSAGADGILKFWDFKKKVLKKSL 531 (910)
T ss_pred ccCCeEEEEEcccCeeecccccCccccCceeEEEecCC---------------CceEEEccCcceEEEEecCCcceeeee
Confidence 34688889999999999998 589999999976532 567999999999999999998888888
Q ss_pred EeCCcceeEEEccCCCEEEE-EcCCeEEEEECCCcceEEeeec-cceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcc
Q psy6442 79 EFGAVPNSLEISRDGTTITV-THGSCVTFLDANSLELIKEHKV-PAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA 156 (231)
Q Consensus 79 ~~~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~ 156 (231)
.++..+..+..+.....+++ ..+-.|.++|..+.+..+.+.. ..+++..++ +|+++.+++++-|++|++||+.++.
T Consensus 532 ~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~F--S~DgrWlisasmD~tIr~wDlpt~~ 609 (910)
T KOG1539|consen 532 RLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTF--SPDGRWLISASMDSTIRTWDLPTGT 609 (910)
T ss_pred ccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEe--CCCCcEEEEeecCCcEEEEeccCcc
Confidence 88877777777766555444 4556899999998888888764 446776665 9999999999999999999999999
Q ss_pred eeeeccCCCCCeeEEEEcCCCCEEEEeeCC-CcEEEEeC
Q psy6442 157 EIESFKGHFGPIHCVKFSPDGELYASGSED-GTLRLWQT 194 (231)
Q Consensus 157 ~~~~~~~h~~~V~~v~~spd~~~laS~s~d-~~v~iwd~ 194 (231)
++..+. -..++.++.|||+|.+||++..| .-|.+|--
T Consensus 610 lID~~~-vd~~~~sls~SPngD~LAT~Hvd~~gIylWsN 647 (910)
T KOG1539|consen 610 LIDGLL-VDSPCTSLSFSPNGDFLATVHVDQNGIYLWSN 647 (910)
T ss_pred eeeeEe-cCCcceeeEECCCCCEEEEEEecCceEEEEEc
Confidence 987764 45688999999999999999888 66999963
No 134
>KOG0650|consensus
Probab=99.65 E-value=3.2e-15 Score=125.50 Aligned_cols=192 Identities=19% Similarity=0.244 Sum_probs=143.6
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCce--eEeccc-cc-----------cc-----------------
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASK--AASGAA-DF-----------QA----------------- 49 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~--~~s~~~-d~-----------~~----------------- 49 (231)
|+.||+||+|...||+++.++. -.+.|.+++|+|.+.. |+.+.. .. ..
T Consensus 418 GsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~ 496 (733)
T KOG0650|consen 418 GSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIFGDRLEVGPTKELLASAPNESEPD 496 (733)
T ss_pred cCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEecCceEEeCccccchhhhcchhhhhhcCCCccCCc
Confidence 6899999999999999999976 3568999999998753 222211 00 00
Q ss_pred ----------------------------------cCCCEEEEEeCC---CCEEEEeCCCCCceEEE-EeCCcceeEEEcc
Q psy6442 50 ----------------------------------KNNTRLISCAED---KTVRLWDVSASAEVQKL-EFGAVPNSLEISR 91 (231)
Q Consensus 50 ----------------------------------~~~~~l~s~s~D---~ti~iwd~~~~~~~~~~-~~~~~~~~v~~~~ 91 (231)
+.|.+|+|...| ..|.|.++...+...-+ .....+..+.|+|
T Consensus 497 ~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHP 576 (733)
T KOG0650|consen 497 AAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHP 576 (733)
T ss_pred ccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhhcCCceeEEEecC
Confidence 055666665554 35667777655443333 2346788999999
Q ss_pred CCCEEEEEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc-ceeeeccCCCCCeeE
Q psy6442 92 DGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG-AEIESFKGHFGPIHC 170 (231)
Q Consensus 92 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~-~~~~~~~~h~~~V~~ 170 (231)
...+++++....+++||+.....++....... ....++.++.|..++.|+.|.++..||+..+ +..+++.-|...|++
T Consensus 577 s~p~lfVaTq~~vRiYdL~kqelvKkL~tg~k-wiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~ 655 (733)
T KOG0650|consen 577 SKPYLFVATQRSVRIYDLSKQELVKKLLTGSK-WISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRS 655 (733)
T ss_pred CCceEEEEeccceEEEehhHHHHHHHHhcCCe-eeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhh
Confidence 99999999999999999987666554433222 1223455899999999999999999999754 456778889999999
Q ss_pred EEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 171 VKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 171 v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
|+|++.-.++|||+.|+++.||..
T Consensus 656 Va~H~ryPLfas~sdDgtv~Vfhg 679 (733)
T KOG0650|consen 656 VAFHKRYPLFASGSDDGTVIVFHG 679 (733)
T ss_pred hhhccccceeeeecCCCcEEEEee
Confidence 999999999999999999999974
No 135
>KOG1274|consensus
Probab=99.65 E-value=2.4e-14 Score=125.24 Aligned_cols=193 Identities=14% Similarity=0.142 Sum_probs=148.6
Q ss_pred CCcCCCceeeeccCC-CeEeeeecccccEEEEEECCCCceeEecccccccc---------------------------CC
Q psy6442 1 MCVDGKPMLRQGDTG-DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK---------------------------NN 52 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g-~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~---------------------------~~ 52 (231)
|+.||.||.|+...- +.-.+...|...|.+++.. +.++++++.+-.+. ++
T Consensus 31 cgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~--s~~f~~~s~~~tv~~y~fps~~~~~iL~Rftlp~r~~~v~g~g 108 (933)
T KOG1274|consen 31 CGSDGDIRKWKTNSDEEEPETIDISGELVSSIACY--SNHFLTGSEQNTVLRYKFPSGEEDTILARFTLPIRDLAVSGSG 108 (933)
T ss_pred ecCCCceEEeecCCcccCCchhhccCceeEEEeec--ccceEEeeccceEEEeeCCCCCccceeeeeeccceEEEEecCC
Confidence 578999999997655 4444444477788877654 44777776653321 67
Q ss_pred CEEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeeccc-------e
Q psy6442 53 TRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVPA-------Q 123 (231)
Q Consensus 53 ~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~-------~ 123 (231)
..++.||.|-.||+-+..+......+. +..++.++.++|.+.+++++ .+|.+.+||+.++......+.-. .
T Consensus 109 ~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s 188 (933)
T KOG1274|consen 109 KMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILS 188 (933)
T ss_pred cEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCcccccccc
Confidence 899999999999999998887766654 67899999999999998765 68999999999877655443211 1
Q ss_pred eEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeecc--CCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCC
Q psy6442 124 VHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFK--GHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 124 ~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~--~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~ 195 (231)
-.+....++|++..++....|..|.+|+....+....+. -|...+..+.|||.|.|||+++.||.|.|||..
T Consensus 189 ~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~ 262 (933)
T KOG1274|consen 189 RICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVD 262 (933)
T ss_pred ceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecc
Confidence 122334568998888888999999999988777766653 244459999999999999999999999999998
No 136
>KOG0299|consensus
Probab=99.64 E-value=5.7e-15 Score=120.39 Aligned_cols=166 Identities=16% Similarity=0.240 Sum_probs=129.9
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEE-eCCCCEEEEeCCCCCceEEEE
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISC-AEDKTVRLWDVSASAEVQKLE 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~-s~D~ti~iwd~~~~~~~~~~~ 79 (231)
+|.|.+|++|+.+.-.++.+|-||++.|.+++-..- .+++|. +.|+|+++|++.....+....
T Consensus 262 ~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~r----------------eR~vtVGgrDrT~rlwKi~eesqlifrg 325 (479)
T KOG0299|consen 262 ASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSR----------------ERCVTVGGRDRTVRLWKIPEESQLIFRG 325 (479)
T ss_pred eecCCceEEEehhHhHHHHHHhCCccceeeechhcc----------------cceEEeccccceeEEEeccccceeeeeC
Confidence 478999999999999999999999999999975432 234554 499999999997666555555
Q ss_pred eCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeecccee-----------EEEEEEecCCCCEEEEecCCCeEE
Q psy6442 80 FGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQV-----------HSASLLLNSERPIFVCGGEDLKMY 148 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~g~~d~~i~ 148 (231)
....+.++++-.+..++..+.++.|.+|+....+++.....+.++ ...++..-+...++++|+.+|+++
T Consensus 326 ~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vr 405 (479)
T KOG0299|consen 326 GEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVR 405 (479)
T ss_pred CCCCeeeEEEecccceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceE
Confidence 567899999999988888888999999999988887664432111 223344567888999999999999
Q ss_pred EEeCCCc----ceeeeccCCCCCeeEEEEcCCCCEEEEe
Q psy6442 149 KFDYSTG----AEIESFKGHFGPIHCVKFSPDGELYASG 183 (231)
Q Consensus 149 ~~d~~~~----~~~~~~~~h~~~V~~v~~spd~~~laS~ 183 (231)
+|-+..+ .++..+. -.+-|++++|+++|..+++|
T Consensus 406 LW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~sgk~ivag 443 (479)
T KOG0299|consen 406 LWKIEDGLRAINLLYSLS-LVGFVNSLAFSNSGKRIVAG 443 (479)
T ss_pred EEEecCCccccceeeecc-cccEEEEEEEccCCCEEEEe
Confidence 9998876 3455554 66789999999999955444
No 137
>KOG0269|consensus
Probab=99.64 E-value=2.1e-15 Score=129.66 Aligned_cols=148 Identities=15% Similarity=0.322 Sum_probs=116.1
Q ss_pred CCCEEEEEeCCCCEEEEeCCC---CCceEE-EEeCCcceeEEEccCCCEEEE--EcCCeEEEEECCCcceEEeeecc-ce
Q psy6442 51 NNTRLISCAEDKTVRLWDVSA---SAEVQK-LEFGAVPNSLEISRDGTTITV--THGSCVTFLDANSLELIKEHKVP-AQ 123 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iwd~~~---~~~~~~-~~~~~~~~~v~~~~~~~~~~~--~~~~~i~~~d~~~~~~~~~~~~~-~~ 123 (231)
..+.|+||+..|.|-+||+.. .+.+.. .++...++.+.|++....+++ +.|++|+.||.+......++... ..
T Consensus 99 ~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSES 178 (839)
T KOG0269|consen 99 YSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSES 178 (839)
T ss_pred hhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchh
Confidence 457899999999999999986 232222 245678899999998776555 45799999999887766665543 23
Q ss_pred eEEEEEEecCCCCEEEEecCCCeEEEEeCCCcc-eeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCe
Q psy6442 124 VHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA-EIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKT 199 (231)
Q Consensus 124 ~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~-~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~ 199 (231)
+..+.+.+. .+..++++.+.|.+++||++... ....+.+|.++|.++.|+|++.+||||++|+.|+|||....+.
T Consensus 179 iRDV~fsp~-~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~ 254 (839)
T KOG0269|consen 179 IRDVKFSPG-YGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRA 254 (839)
T ss_pred hhceeeccC-CCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCc
Confidence 444555433 46678999999999999998654 4567889999999999999999999999999999999875553
No 138
>KOG1188|consensus
Probab=99.63 E-value=3.1e-15 Score=118.03 Aligned_cols=167 Identities=26% Similarity=0.426 Sum_probs=116.4
Q ss_pred cCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCC
Q psy6442 3 VDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGA 82 (231)
Q Consensus 3 ~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~ 82 (231)
..|.|++++..||+.+..+++|.+.+..+.|.... ....+.||+.||+||+||++.......+....
T Consensus 48 Sngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~d-------------s~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~ 114 (376)
T KOG1188|consen 48 SNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCD-------------SPHGVISCSSDGTVRLWDIRSQAESARISWTQ 114 (376)
T ss_pred cCCeEEEEeccchhhhheecCCCCcccceEEecCC-------------CCCeeEEeccCCeEEEEEeecchhhhheeccC
Confidence 36899999999999999999999999999887531 14458999999999999999876544433222
Q ss_pred cceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecC----CCeEEEEeCCCcce-
Q psy6442 83 VPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGE----DLKMYKFDYSTGAE- 157 (231)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----d~~i~~~d~~~~~~- 157 (231)
.+ +. +. .++..+....++++|.+ +..+.+||.+..+.
T Consensus 115 ~~--------~~----------------------------~f--~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~ 156 (376)
T KOG1188|consen 115 QS--------GT----------------------------PF--ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQL 156 (376)
T ss_pred CC--------CC----------------------------cc--eEeeccCcCCeEEeccccccCceEEEEEEeccccch
Confidence 11 00 01 12222445555666543 56788999987654
Q ss_pred eeec-cCCCCCeeEEEEcCC-CCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcc--cCCCCCCccc
Q psy6442 158 IESF-KGHFGPIHCVKFSPD-GELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGL--NNSLGLDSSG 220 (231)
Q Consensus 158 ~~~~-~~h~~~V~~v~~spd-~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 220 (231)
+..+ +.|...|+++.|+|. .++|+|||-||-|.|||+.....-.-+-.+.|.- ...|+|.+.+
T Consensus 157 l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ 223 (376)
T KOG1188|consen 157 LRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKK 223 (376)
T ss_pred hhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCC
Confidence 5554 789999999999995 6799999999999999997664432222222222 2445555555
No 139
>KOG0302|consensus
Probab=99.62 E-value=1.9e-14 Score=115.02 Aligned_cols=173 Identities=20% Similarity=0.336 Sum_probs=126.7
Q ss_pred CCceeeeccCCCeE---eeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCC---CceEEE
Q psy6442 5 GKPMLRQGDTGDWI---GTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSAS---AEVQKL 78 (231)
Q Consensus 5 ~~~~~~~~~~g~~i---~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~---~~~~~~ 78 (231)
+.++||...+|++. ..|.+|+..|-.++|+|.. ...++|||.|++|+|||++.+ .++.+.
T Consensus 234 ~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE--------------~~vfaScS~DgsIrIWDiRs~~~~~~~~~k 299 (440)
T KOG0302|consen 234 KGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTE--------------DGVFASCSCDGSIRIWDIRSGPKKAAVSTK 299 (440)
T ss_pred cceEeeeeccCceeecCccccccccchhhhccCCcc--------------CceEEeeecCceEEEEEecCCCccceeEee
Confidence 46789999888763 3477899999999999864 556999999999999999988 556666
Q ss_pred EeCCcceeEEEccCCCEEEEE-cCCeEEEEECCCcc---eEEeeecc-ceeEEEEEEecCCCCEEEEecCCCeEEEEeCC
Q psy6442 79 EFGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLE---LIKEHKVP-AQVHSASLLLNSERPIFVCGGEDLKMYKFDYS 153 (231)
Q Consensus 79 ~~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~ 153 (231)
.++..++.+.|+..-.+++.+ .++++++||++..+ +++.++.+ .++.++.|.+. +...+++++.|..|.+||+.
T Consensus 300 Ah~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~-e~s~iaasg~D~QitiWDls 378 (440)
T KOG0302|consen 300 AHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPH-EDSVIAASGEDNQITIWDLS 378 (440)
T ss_pred ccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccc-cCceEEeccCCCcEEEEEee
Confidence 678889999999988755443 46899999988643 45566654 46766666432 45567788889999999984
Q ss_pred Ccce--------e--------eeccCCC--CCeeEEEEcCC-CCEEEEeeCCCcEEEEe
Q psy6442 154 TGAE--------I--------ESFKGHF--GPIHCVKFSPD-GELYASGSEDGTLRLWQ 193 (231)
Q Consensus 154 ~~~~--------~--------~~~~~h~--~~V~~v~~spd-~~~laS~s~d~~v~iwd 193 (231)
.-.. . +-+--|. ..|-.|.|+++ .-+|+|.+.|| +.||.
T Consensus 379 vE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dG-fnVfk 436 (440)
T KOG0302|consen 379 VEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDG-FNVFK 436 (440)
T ss_pred ccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccc-eeEEE
Confidence 3211 0 1122243 35778899997 45899999999 55654
No 140
>KOG0641|consensus
Probab=99.62 E-value=1.7e-13 Score=103.10 Aligned_cols=178 Identities=18% Similarity=0.268 Sum_probs=125.1
Q ss_pred eEeeeecccccEEEEEECCCCceeEecccccccc------------------------------------------CCCE
Q psy6442 17 WIGTFEGHKGCVWGVDINKDASKAASGAADFQAK------------------------------------------NNTR 54 (231)
Q Consensus 17 ~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~------------------------------------------~~~~ 54 (231)
.+..|+ .+..|.+++|.|.|.+-+-|+...+.+ .++.
T Consensus 25 ~i~~l~-dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~gel 103 (350)
T KOG0641|consen 25 AINILE-DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGEL 103 (350)
T ss_pred EEEEec-chhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCe
Confidence 455555 477899999999999888776543221 6789
Q ss_pred EEEEeCCCCEEEEeCCCCCceE---EEE---eCCcceeEEEcc------------------------------------C
Q psy6442 55 LISCAEDKTVRLWDVSASAEVQ---KLE---FGAVPNSLEISR------------------------------------D 92 (231)
Q Consensus 55 l~s~s~D~ti~iwd~~~~~~~~---~~~---~~~~~~~v~~~~------------------------------------~ 92 (231)
|+|+|.|++||+..+....+.. .++ +...+..++|-. .
T Consensus 104 iatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sght 183 (350)
T KOG0641|consen 104 IATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHT 183 (350)
T ss_pred EEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCc
Confidence 9999999999998654322210 011 112222222211 0
Q ss_pred CCEE---------EE--EcCCeEEEEECCCcceEEeeecc-----ce-eEEEEEEecCCCCEEEEecCCCeEEEEeCCCc
Q psy6442 93 GTTI---------TV--THGSCVTFLDANSLELIKEHKVP-----AQ-VHSASLLLNSERPIFVCGGEDLKMYKFDYSTG 155 (231)
Q Consensus 93 ~~~~---------~~--~~~~~i~~~d~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~ 155 (231)
|..+ ++ +.+.+|++||++-..++...... .+ .-...+..+|.++++++|..|....+||++-+
T Consensus 184 ghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~ 263 (350)
T KOG0641|consen 184 GHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGG 263 (350)
T ss_pred ccEEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCC
Confidence 1111 12 24568899998876666654321 11 11123345899999999999999999999999
Q ss_pred ceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCC
Q psy6442 156 AEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 156 ~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~ 195 (231)
..++.|.-|.+.|.++.|||...++.+|+.|..|++=|++
T Consensus 264 r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlq 303 (350)
T KOG0641|consen 264 RMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQ 303 (350)
T ss_pred ceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecc
Confidence 9999999999999999999999999999999999999984
No 141
>KOG2110|consensus
Probab=99.62 E-value=1.6e-13 Score=109.45 Aligned_cols=170 Identities=16% Similarity=0.245 Sum_probs=132.4
Q ss_pred EEEEEeCC--CCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeecc--ceeEEEEE
Q psy6442 54 RLISCAED--KTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVP--AQVHSASL 129 (231)
Q Consensus 54 ~l~s~s~D--~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~ 129 (231)
.+|-.+.+ +.+|+.++..+..+..+.++..+.+|....+ .+++.-...|.++|+++++.+.++..- .+...+.+
T Consensus 58 LvaiV~~~qpr~Lkv~~~Kk~~~ICe~~fpt~IL~VrmNr~--RLvV~Lee~IyIydI~~MklLhTI~t~~~n~~gl~Al 135 (391)
T KOG2110|consen 58 LVAIVSIKQPRKLKVVHFKKKTTICEIFFPTSILAVRMNRK--RLVVCLEESIYIYDIKDMKLLHTIETTPPNPKGLCAL 135 (391)
T ss_pred eeEEEecCCCceEEEEEcccCceEEEEecCCceEEEEEccc--eEEEEEcccEEEEecccceeehhhhccCCCccceEee
Confidence 44444444 4599999999888888888999999988875 334444455999999999999887542 33333445
Q ss_pred EecCCCCEEEEec--CCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcE-EEEeCCCCCeeee-eec
Q psy6442 130 LLNSERPIFVCGG--EDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTL-RLWQTNVGKTYGL-WKC 205 (231)
Q Consensus 130 ~~~~~~~~~~~g~--~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v-~iwd~~~~~~~~~-~~~ 205 (231)
.++..+..++..+ ..|.|.+||..+-+....+..|.+++-+++|+|+|.+|||||+.|+| |||.+.+|+.... .++
T Consensus 136 S~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG 215 (391)
T KOG2110|consen 136 SPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRG 215 (391)
T ss_pred ccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCC
Confidence 4566666666543 34789999998888888899999999999999999999999999996 8999999997655 466
Q ss_pred cCCcccCCCCCCccccccce
Q psy6442 206 IEGGLNNSLGLDSSGHLNNV 225 (231)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~ 225 (231)
+-+.-..+|+|+.++.++.+
T Consensus 216 ~~~~~IySL~Fs~ds~~L~~ 235 (391)
T KOG2110|consen 216 TYPVSIYSLSFSPDSQFLAA 235 (391)
T ss_pred ceeeEEEEEEECCCCCeEEE
Confidence 66777788899998887753
No 142
>KOG2055|consensus
Probab=99.62 E-value=4.1e-14 Score=115.60 Aligned_cols=205 Identities=12% Similarity=0.161 Sum_probs=167.6
Q ss_pred CCcCCCceeeecc--CCCeEeeeecccccEEEEEECCCCc-eeEeccccc-----------------------------c
Q psy6442 1 MCVDGKPMLRQGD--TGDWIGTFEGHKGCVWGVDINKDAS-KAASGAADF-----------------------------Q 48 (231)
Q Consensus 1 ~~~d~~~~~~~~~--~g~~i~~l~gH~~~V~~~~~~~~~~-~~~s~~~d~-----------------------------~ 48 (231)
++.|+++|++..+ +...++++.--.-+|.+..|.|+|. .+++++... .
T Consensus 231 aG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~Fe 310 (514)
T KOG2055|consen 231 AGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFE 310 (514)
T ss_pred ecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccccccccCCCCcccchhheeE
Confidence 5789999999875 3346777665677999999999998 677665421 0
Q ss_pred -ccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeeccceeEE
Q psy6442 49 -AKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVPAQVHS 126 (231)
Q Consensus 49 -~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~ 126 (231)
..+++.|+..|..|.|.+--..+++.+.++.....+..+.|+.+++.++++ .++.+.+||++...+++++.....+..
T Consensus 311 VShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~g 390 (514)
T KOG2055|consen 311 VSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHG 390 (514)
T ss_pred ecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccce
Confidence 126789999999999999999999999999999999999999999877665 468999999999999998877776666
Q ss_pred EEEEecCCCCEEEEecCCCeEEEEeCCC------cceeeeccCCCCCeeEEEEcCCCCEEEEee--CCCcEEEEeCCCCC
Q psy6442 127 ASLLLNSERPIFVCGGEDLKMYKFDYST------GAEIESFKGHFGPIHCVKFSPDGELYASGS--EDGTLRLWQTNVGK 198 (231)
Q Consensus 127 ~~~~~~~~~~~~~~g~~d~~i~~~d~~~------~~~~~~~~~h~~~V~~v~~spd~~~laS~s--~d~~v~iwd~~~~~ 198 (231)
.++..+.++.++|+|+..|-+-+||..+ .+++..+..-.-.|++++|+||.++||.|| .+..+|+-.+-+..
T Consensus 391 ts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~T 470 (514)
T KOG2055|consen 391 TSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCT 470 (514)
T ss_pred eeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEecccee
Confidence 6676788999999999999999998643 345666666677899999999999998887 57889999998887
Q ss_pred eeeeeec
Q psy6442 199 TYGLWKC 205 (231)
Q Consensus 199 ~~~~~~~ 205 (231)
++.-|-.
T Consensus 471 VFsNfP~ 477 (514)
T KOG2055|consen 471 VFSNFPT 477 (514)
T ss_pred eeccCCC
Confidence 7766643
No 143
>KOG0646|consensus
Probab=99.62 E-value=2.2e-14 Score=117.24 Aligned_cols=161 Identities=17% Similarity=0.275 Sum_probs=127.4
Q ss_pred CCcCCCceeeecc---------CCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCC
Q psy6442 1 MCVDGKPMLRQGD---------TGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSA 71 (231)
Q Consensus 1 ~~~d~~~~~~~~~---------~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~ 71 (231)
+|.||.|++|..- +=+.++.|.+|+-+|..+...+.| -+.+|+|+|.|.++|+||+..
T Consensus 141 gskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg-------------~~~rl~TaS~D~t~k~wdlS~ 207 (476)
T KOG0646|consen 141 GSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGG-------------TNARLYTASEDRTIKLWDLSL 207 (476)
T ss_pred cCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCC-------------ccceEEEecCCceEEEEEecc
Confidence 5899999999872 224688899999999999887754 257899999999999999999
Q ss_pred CCceEEEEeCCcceeEEEccCCCEEEEEc-CCeEEEEECCCcc---e-------------EEeeec-c--ceeEEEEEEe
Q psy6442 72 SAEVQKLEFGAVPNSLEISRDGTTITVTH-GSCVTFLDANSLE---L-------------IKEHKV-P--AQVHSASLLL 131 (231)
Q Consensus 72 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~i~~~d~~~~~---~-------------~~~~~~-~--~~~~~~~~~~ 131 (231)
+..+.++.++..+.+++.+|....++++. +++|.+.+..... . ...+.. . ..+.+ +..
T Consensus 208 g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITc--Lai 285 (476)
T KOG0646|consen 208 GVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITC--LAI 285 (476)
T ss_pred ceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeE--EEE
Confidence 99999999999999999999999988864 6777665432211 0 111111 1 13443 445
Q ss_pred cCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCC
Q psy6442 132 NSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPD 176 (231)
Q Consensus 132 ~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd 176 (231)
+.++.+|++|+.|+.+.+||..+.+.++++...+++|+-+.+.|-
T Consensus 286 s~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~~ 330 (476)
T KOG0646|consen 286 STDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINPL 330 (476)
T ss_pred ecCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeecc
Confidence 889999999999999999999999999888767899999999764
No 144
>KOG1538|consensus
Probab=99.61 E-value=6.3e-14 Score=119.35 Aligned_cols=193 Identities=18% Similarity=0.270 Sum_probs=140.1
Q ss_pred CcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEecccccccc-------------------------------
Q psy6442 2 CVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK------------------------------- 50 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~------------------------------- 50 (231)
+.+..+.++|.+.|.++.+|+||.+.|++++|+.+|+.+++|+.|..+.
T Consensus 30 AAg~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP~~h~La 109 (1081)
T KOG1538|consen 30 AAGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSHNDAIQCMSFNPITHQLA 109 (1081)
T ss_pred ecCCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccceeeeccCCeeeEeecCchHHHhh
Confidence 3567899999999999999999999999999999999999998874321
Q ss_pred ---------------------------------CCCEEEEEeCCCCEEEEeCCCCCceEEEEe----CCcceeEEEccCC
Q psy6442 51 ---------------------------------NNTRLISCAEDKTVRLWDVSASAEVQKLEF----GAVPNSLEISRDG 93 (231)
Q Consensus 51 ---------------------------------~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~----~~~~~~v~~~~~~ 93 (231)
+|++++-|-.||||-|-+-.. +....++- ..++.+++|+|..
T Consensus 110 sCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~g-Eek~~I~Rpgg~Nspiwsi~~~p~s 188 (1081)
T KOG1538|consen 110 SCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNG-EEKVKIERPGGSNSPIWSICWNPSS 188 (1081)
T ss_pred hcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecCCC-CcceEEeCCCCCCCCceEEEecCCC
Confidence 778888888899998875433 33233332 3578899999864
Q ss_pred C-----EEEEE-cCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCC
Q psy6442 94 T-----TITVT-HGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGP 167 (231)
Q Consensus 94 ~-----~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~ 167 (231)
. .+.+. -+.++.++.++....-+.-...... .++...++|.+++.|+.|+.+.+|. +.|-.+.++-....-
T Consensus 189 g~G~~di~aV~DW~qTLSFy~LsG~~Igk~r~L~FdP--~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~~D~W 265 (1081)
T KOG1538|consen 189 GEGRNDILAVADWGQTLSFYQLSGKQIGKDRALNFDP--CCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGTVGEQDSW 265 (1081)
T ss_pred CCCccceEEEEeccceeEEEEecceeecccccCCCCc--hhheeccCCcEEEEccCCCceEEEe-ecCeEEeecccccee
Confidence 3 22222 2345555544332211122222223 3344478899999999999999884 466677776555567
Q ss_pred eeEEEEcCCCCEEEEeeCCCcEEEEeCCCCC
Q psy6442 168 IHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 168 V~~v~~spd~~~laS~s~d~~v~iwd~~~~~ 198 (231)
|++++..|+++.++.|+.||+|..|++....
T Consensus 266 IWtV~~~PNsQ~v~~GCqDGTiACyNl~fST 296 (1081)
T KOG1538|consen 266 IWTVQAKPNSQYVVVGCQDGTIACYNLIFST 296 (1081)
T ss_pred EEEEEEccCCceEEEEEccCeeehhhhHHhH
Confidence 9999999999999999999999999975443
No 145
>KOG1034|consensus
Probab=99.60 E-value=1.2e-14 Score=114.39 Aligned_cols=179 Identities=20% Similarity=0.347 Sum_probs=123.7
Q ss_pred CCcCCCceeeeccCCCeEeee---ecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEE
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTF---EGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQK 77 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l---~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~ 77 (231)
+|.|..||||+-.++.++..| .||.+.|.+++|+++| .+++|||.|.++++|++..++.-..
T Consensus 154 ~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~g---------------d~i~ScGmDhslk~W~l~~~~f~~~ 218 (385)
T KOG1034|consen 154 ASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDG---------------DRIASCGMDHSLKLWRLNVKEFKNK 218 (385)
T ss_pred ecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCC---------------CeeeccCCcceEEEEecChhHHhhh
Confidence 588999999999999999986 5899999999999974 4689999999999999974432211
Q ss_pred EEe-----------------------------CCcceeEEEccCCCEEEEEcCCeEEEEECCC-cc-------------e
Q psy6442 78 LEF-----------------------------GAVPNSLEISRDGTTITVTHGSCVTFLDANS-LE-------------L 114 (231)
Q Consensus 78 ~~~-----------------------------~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~-~~-------------~ 114 (231)
++. ...+.++.|-.+ ..+.-+.++.|..|.... .+ .
T Consensus 219 lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~gd-~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti 297 (385)
T KOG1034|consen 219 LELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFGD-FILSKSCENAIVCWKPGKLEESIHNVKPPESATTI 297 (385)
T ss_pred hhhhcccCCCCccCcCCccccccccccccccccchHHHHHHHhh-heeecccCceEEEEecchhhhhhhccCCCccceee
Confidence 110 011112222211 111224567788887521 11 1
Q ss_pred EEeeeccc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCccee--eecc--CCCCCeeEEEEcCCCCEEEEeeCCCcE
Q psy6442 115 IKEHKVPA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEI--ESFK--GHFGPIHCVKFSPDGELYASGSEDGTL 189 (231)
Q Consensus 115 ~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~--~~~~--~h~~~V~~v~~spd~~~laS~s~d~~v 189 (231)
+.+++.+. .+-.+.+.+++-++.++.|++.+.+++||++..++. .++. .-...|...+||.|+.+|+..++|++|
T Consensus 298 ~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~V 377 (385)
T KOG1034|consen 298 LGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTV 377 (385)
T ss_pred eeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcE
Confidence 22233332 334455667888899999999999999999876542 2222 124578999999999999999999999
Q ss_pred EEEeCC
Q psy6442 190 RLWQTN 195 (231)
Q Consensus 190 ~iwd~~ 195 (231)
-=||-.
T Consensus 378 wrwdrv 383 (385)
T KOG1034|consen 378 WRWDRV 383 (385)
T ss_pred EEEEee
Confidence 888853
No 146
>KOG0649|consensus
Probab=99.60 E-value=2e-13 Score=103.66 Aligned_cols=170 Identities=21% Similarity=0.231 Sum_probs=123.0
Q ss_pred CcCCCceeeeccCCCeEeeeecccccEEEEEE-CCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe
Q psy6442 2 CVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDI-NKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF 80 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~-~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~ 80 (231)
+-|+.++-||+++|+.-++|+||++.|+++.- +. +..+.|++.||++|+||.++++++..++.
T Consensus 133 gGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~----------------~~qilsG~EDGtvRvWd~kt~k~v~~ie~ 196 (325)
T KOG0649|consen 133 GGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNA----------------NGQILSGAEDGTVRVWDTKTQKHVSMIEP 196 (325)
T ss_pred cCCeEEEEEEecCCEEEEEEcCCcceeeeeeeccc----------------CcceeecCCCccEEEEeccccceeEEecc
Confidence 57899999999999999999999999999965 32 34589999999999999999999988864
Q ss_pred CCccee---------EEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEe
Q psy6442 81 GAVPNS---------LEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFD 151 (231)
Q Consensus 81 ~~~~~~---------v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d 151 (231)
...... .+...+...++++.+..+.+|.++..++...+..+.++.-+.+ ...+++++++...+.-|.
T Consensus 197 yk~~~~lRp~~g~wigala~~edWlvCGgGp~lslwhLrsse~t~vfpipa~v~~v~F----~~d~vl~~G~g~~v~~~~ 272 (325)
T KOG0649|consen 197 YKNPNLLRPDWGKWIGALAVNEDWLVCGGGPKLSLWHLRSSESTCVFPIPARVHLVDF----VDDCVLIGGEGNHVQSYT 272 (325)
T ss_pred ccChhhcCcccCceeEEEeccCceEEecCCCceeEEeccCCCceEEEecccceeEeee----ecceEEEeccccceeeee
Confidence 322222 2333444567777778999999999999888888877766555 445678888888888887
Q ss_pred CCCcceeeeccCCCCCeeEEEEcCCCCEEEEe-eCCCcEEEE
Q psy6442 152 YSTGAEIESFKGHFGPIHCVKFSPDGELYASG-SEDGTLRLW 192 (231)
Q Consensus 152 ~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~-s~d~~v~iw 192 (231)
+ .|......+...-...+..++-..-.++|. +....+.|+
T Consensus 273 l-~Gvl~a~ip~~s~~c~s~s~~~~p~k~~s~ag~s~~~~i~ 313 (325)
T KOG0649|consen 273 L-NGVLQANIPVESTACYSASWQTSPIKFISIAGFSNKLHIL 313 (325)
T ss_pred e-ccEEEEeccCCccceeeecccCCceEEEEecccceeeeee
Confidence 6 344333333333345666666665544444 455556665
No 147
>KOG2048|consensus
Probab=99.59 E-value=3.1e-13 Score=114.95 Aligned_cols=168 Identities=20% Similarity=0.337 Sum_probs=129.9
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCceEEEEe---CCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccc-eeEEE
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAEVQKLEF---GAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPA-QVHSA 127 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~ 127 (231)
..+||.+=.||.|.||+++..-+...+-+ ...+.+++|++.++.+..+.++.|..||+.+.++...+.... .+-+
T Consensus 37 S~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWs- 115 (691)
T KOG2048|consen 37 SNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWS- 115 (691)
T ss_pred CCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEecccCceeEEecCCCcceeE-
Confidence 34588888999999999998755444322 356889999998888888889999999999988877766533 3443
Q ss_pred EEEecCCCCEEEEecCCCeEEEEeCCCcceee--eccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeee----
Q psy6442 128 SLLLNSERPIFVCGGEDLKMYKFDYSTGAEIE--SFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYG---- 201 (231)
Q Consensus 128 ~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~--~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~---- 201 (231)
+..+|.+..++.|++||.++.++...+.... .|...++.|.+++|+|++..+++|+.||.|++||+.++.+..
T Consensus 116 -iai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~ 194 (691)
T KOG2048|consen 116 -IAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITM 194 (691)
T ss_pred -EEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeee
Confidence 3448888999999999988888887776553 355667999999999999999999999999999998777643
Q ss_pred ------------eeeccCCcccCCCCCCcccc
Q psy6442 202 ------------LWKCIEGGLNNSLGLDSSGH 221 (231)
Q Consensus 202 ------------~~~~~~~~~~~~~~~~~~~~ 221 (231)
.|...+=..+..++-|+.|.
T Consensus 195 ~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~ 226 (691)
T KOG2048|consen 195 QLDRLSKREPTIVWSVLFLRDSTIASGDSAGT 226 (691)
T ss_pred cccccccCCceEEEEEEEeecCcEEEecCCce
Confidence 45555545555555555553
No 148
>KOG0322|consensus
Probab=99.59 E-value=2e-14 Score=110.10 Aligned_cols=139 Identities=23% Similarity=0.334 Sum_probs=98.5
Q ss_pred EEEEEeCCCCEEEEeCCCCCceEEE-----------EeCCcceeEEEccCCCEEEE-EcCCeEEEEECCC--cce--EEe
Q psy6442 54 RLISCAEDKTVRLWDVSASAEVQKL-----------EFGAVPNSLEISRDGTTITV-THGSCVTFLDANS--LEL--IKE 117 (231)
Q Consensus 54 ~l~s~s~D~ti~iwd~~~~~~~~~~-----------~~~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~--~~~--~~~ 117 (231)
.|+.|-.+|.+-+||+.++..+..+ .+.+++.++.+.+.-..-+. +.+..+..|..+. +.. ..+
T Consensus 167 lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e 246 (323)
T KOG0322|consen 167 LLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKE 246 (323)
T ss_pred EEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccce
Confidence 3677788999999999987432222 23456677776654322221 1233455555432 221 112
Q ss_pred eeccc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 118 HKVPA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 118 ~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
+.... .+.... +.|+++++|++++|++|++|..++..++..++-|.+.|++++|+|+-.++|++|.|+.|.+|++
T Consensus 247 ~~lknpGv~gvr--IRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 247 ITLKNPGVSGVR--IRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred EEecCCCccceE--EccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 22211 222233 3899999999999999999999999999999999999999999999999999999999999985
No 149
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.59 E-value=1.8e-12 Score=107.66 Aligned_cols=185 Identities=28% Similarity=0.474 Sum_probs=143.9
Q ss_pred cCCCceeeeccC-CCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeC-CCCEEEEeCCCCCceEEEE-
Q psy6442 3 VDGKPMLRQGDT-GDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAE-DKTVRLWDVSASAEVQKLE- 79 (231)
Q Consensus 3 ~d~~~~~~~~~~-g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~-D~ti~iwd~~~~~~~~~~~- 79 (231)
.|+++++|+... +.....+.+|...|..+.|+|++. .+++++. |+++++|+...+..+..+.
T Consensus 132 ~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (466)
T COG2319 132 LDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGK---------------LLASGSSLDGTIKLWDLRTGKPLSTLAG 196 (466)
T ss_pred CCccEEEEEecCCCeEEEEEecCcccEEEEEECCCCC---------------EEEecCCCCCceEEEEcCCCceEEeecc
Confidence 488999999887 788899999999999999999854 4566664 9999999999877776665
Q ss_pred eCCcceeEEEccCCCEEEE--EcCCeEEEEECCCcceEE-eeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcc
Q psy6442 80 FGAVPNSLEISRDGTTITV--THGSCVTFLDANSLELIK-EHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA 156 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~--~~~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~ 156 (231)
+...+..++++|++..+++ ..++.+.+||........ ......... .. .+.+++..+++++.++.+++|+.....
T Consensus 197 ~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~ 274 (466)
T COG2319 197 HTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VS-SFSPDGSLLASGSSDGTIRLWDLRSSS 274 (466)
T ss_pred CCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eE-eECCCCCEEEEecCCCcEEEeeecCCC
Confidence 3678899999999873333 467888899877655555 233322221 11 346777788899999999999997655
Q ss_pred e-eeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeee
Q psy6442 157 E-IESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWK 204 (231)
Q Consensus 157 ~-~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~ 204 (231)
. +..+.+|..+|.++.|+|++..+++++.|+.+++|+..+........
T Consensus 275 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 323 (466)
T COG2319 275 SLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLT 323 (466)
T ss_pred cEEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEee
Confidence 4 44447889999999999998888889999999999998887665554
No 150
>KOG1524|consensus
Probab=99.58 E-value=3.2e-14 Score=118.32 Aligned_cols=183 Identities=19% Similarity=0.293 Sum_probs=134.5
Q ss_pred CcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeC
Q psy6442 2 CVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFG 81 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~ 81 (231)
+.||+.-+.+ +.|+.-+....|.+.|.+-.|+|||. -|+|++.||.||||.-...-.....+..
T Consensus 82 s~DGkf~il~-k~~rVE~sv~AH~~A~~~gRW~~dGt---------------gLlt~GEDG~iKiWSrsGMLRStl~Q~~ 145 (737)
T KOG1524|consen 82 SNDGRFVILN-KSARVERSISAHAAAISSGRWSPDGA---------------GLLTAGEDGVIKIWSRSGMLRSTVVQNE 145 (737)
T ss_pred cCCceEEEec-ccchhhhhhhhhhhhhhhcccCCCCc---------------eeeeecCCceEEEEeccchHHHHHhhcC
Confidence 5677766666 55777677788999999999999853 4899999999999985433222223567
Q ss_pred CcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeec
Q psy6442 82 AVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESF 161 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~ 161 (231)
..+++++|.|+...++.+.++.+.+--+.....+-..+.+.. ...++.+++...++++|++|.+.++||- .|..+.+-
T Consensus 146 ~~v~c~~W~p~S~~vl~c~g~h~~IKpL~~n~k~i~WkAHDG-iiL~~~W~~~s~lI~sgGED~kfKvWD~-~G~~Lf~S 223 (737)
T KOG1524|consen 146 ESIRCARWAPNSNSIVFCQGGHISIKPLAANSKIIRWRAHDG-LVLSLSWSTQSNIIASGGEDFRFKIWDA-QGANLFTS 223 (737)
T ss_pred ceeEEEEECCCCCceEEecCCeEEEeecccccceeEEeccCc-EEEEeecCccccceeecCCceeEEeecc-cCcccccC
Confidence 789999999999887777777666654443332222232222 2345566899999999999999999996 56667766
Q ss_pred cCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeee-ee
Q psy6442 162 KGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGL-WK 204 (231)
Q Consensus 162 ~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~-~~ 204 (231)
..|..+|++++|.|+ ..++-+|. +++|+=..+.|..+++ |.
T Consensus 224 ~~~ey~ITSva~npd-~~~~v~S~-nt~R~~~p~~GSifnlsWS 265 (737)
T KOG1524|consen 224 AAEEYAITSVAFNPE-KDYLLWSY-NTARFSSPRVGSIFNLSWS 265 (737)
T ss_pred Chhccceeeeeeccc-cceeeeee-eeeeecCCCccceEEEEEc
Confidence 779999999999999 66666765 5688777788877765 64
No 151
>KOG0303|consensus
Probab=99.58 E-value=2.1e-13 Score=109.73 Aligned_cols=185 Identities=19% Similarity=0.276 Sum_probs=136.9
Q ss_pred CCcCCCceeeeccCC-------CeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCC
Q psy6442 1 MCVDGKPMLRQGDTG-------DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASA 73 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g-------~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~ 73 (231)
||.|-+|++|.--.+ +.+..|.||+.+|--+.|+|-. ...|+|+|.|.+|+||++.+++
T Consensus 100 gSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA--------------~NVLlsag~Dn~v~iWnv~tge 165 (472)
T KOG0303|consen 100 GSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTA--------------PNVLLSAGSDNTVSIWNVGTGE 165 (472)
T ss_pred CCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccc--------------hhhHhhccCCceEEEEeccCCc
Confidence 689999999997433 3467789999999999999963 4568999999999999999999
Q ss_pred ceEEEEeCCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEe---cCCCeEEE
Q psy6442 74 EVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCG---GEDLKMYK 149 (231)
Q Consensus 74 ~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~d~~i~~ 149 (231)
.+.++.++..+.++.|+.+|..++.. .+..|++||.+....+.+-..+.........+-.++.++.+| ..+..+-+
T Consensus 166 ali~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aL 245 (472)
T KOG0303|consen 166 ALITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIAL 245 (472)
T ss_pred eeeecCCCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeeccccccccceec
Confidence 99888899999999999999988765 578999999999988776533322222222234566655555 23567888
Q ss_pred EeCCCcc---eeeeccCCCCCeeEEEEcCCCCEE-EEeeCCCcEEEEeCCCCCee
Q psy6442 150 FDYSTGA---EIESFKGHFGPIHCVKFSPDGELY-ASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 150 ~d~~~~~---~~~~~~~h~~~V~~v~~spd~~~l-aS~s~d~~v~iwd~~~~~~~ 200 (231)
||...-+ .++++.... .|.-=-|.||..++ +.|-.|+.||-|.+.+..++
T Consensus 246 wdp~nl~eP~~~~elDtSn-Gvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P~ 299 (472)
T KOG0303|consen 246 WDPNNLEEPIALQELDTSN-GVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPPF 299 (472)
T ss_pred cCcccccCcceeEEeccCC-ceEEeeecCCCCEEEEEecCCcceEEEEecCCCce
Confidence 9875432 234454333 34434577776654 55567999999999988854
No 152
>KOG1408|consensus
Probab=99.58 E-value=2.2e-14 Score=122.87 Aligned_cols=221 Identities=17% Similarity=0.234 Sum_probs=149.1
Q ss_pred CCcCCCceeeeccCCCeEeeee-cccccEEEEEECCCCceeEecccc----------ccccCCCEEEEEeCCCCEEEEeC
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFE-GHKGCVWGVDINKDASKAASGAAD----------FQAKNNTRLISCAEDKTVRLWDV 69 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~-gH~~~V~~~~~~~~~~~~~s~~~d----------~~~~~~~~l~s~s~D~ti~iwd~ 69 (231)
||.+|.|||++..+-+.+.+|. .|.-.+---..+ +...+.++... |. .....|...-.|..+.|||+
T Consensus 276 gCa~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~-q~~~~~s~~~~a~fPD~IA~~Fd-et~~klscVYndhSlYvWDv 353 (1080)
T KOG1408|consen 276 GCAKGMVRLFNPETLDYAGTLPRSHALGSDTANLS-QPEPKNSESSPAIFPDAIACQFD-ETTDKLSCVYNDHSLYVWDV 353 (1080)
T ss_pred eeccceeeecCcchhhhccccccccccccchhhcc-cccccccccCcccCCceeEEEec-CCCceEEEEEcCceEEEEec
Confidence 5789999999999888888874 342211100000 01111111111 11 12456777889999999999
Q ss_pred CCCCce----EEEEeCCcceeE------------EEccCCCEEEEEcCCeEEEEECCCc---ceEEe---------e---
Q psy6442 70 SASAEV----QKLEFGAVPNSL------------EISRDGTTITVTHGSCVTFLDANSL---ELIKE---------H--- 118 (231)
Q Consensus 70 ~~~~~~----~~~~~~~~~~~v------------~~~~~~~~~~~~~~~~i~~~d~~~~---~~~~~---------~--- 118 (231)
++-..+ ..+.+..-+.++ +.-|.+-++.++.+++|++|++... ...++ +
T Consensus 354 rD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~ 433 (1080)
T KOG1408|consen 354 RDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYE 433 (1080)
T ss_pred cccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccc
Confidence 874332 222222222222 2334555666778999999997641 11100 0
Q ss_pred -----------------------eccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcC
Q psy6442 119 -----------------------KVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSP 175 (231)
Q Consensus 119 -----------------------~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~sp 175 (231)
+....+.+ +..+|+++.|++|...|+++++++.+-+.+..+++|..+|.|+.||.
T Consensus 434 d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~--~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~ 511 (1080)
T KOG1408|consen 434 DSTQQIMHDASAGIFDKALVSTCDSRFGFRA--LAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSF 511 (1080)
T ss_pred cCchhhhhhccCCcccccchhhcCcccceEE--EEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecC
Confidence 00112333 34589999999999999999999988888888999999999999998
Q ss_pred C---CCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCccccccceee
Q psy6442 176 D---GELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGHLNNVHE 227 (231)
Q Consensus 176 d---~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (231)
- ..+|||+++|+-|+|+|+ ++.+.+.+.+.++.+...++.+-+-.+|++-
T Consensus 512 p~~~~kLLASasrdRlIHV~Dv--~rny~l~qtld~HSssITsvKFa~~gln~~M 564 (1080)
T KOG1408|consen 512 PVLTNKLLASASRDRLIHVYDV--KRNYDLVQTLDGHSSSITSVKFACNGLNRKM 564 (1080)
T ss_pred chhhhHhhhhccCCceEEEEec--ccccchhhhhcccccceeEEEEeecCCceEE
Confidence 4 469999999999999995 4557778888899999999988777777653
No 153
>KOG0290|consensus
Probab=99.58 E-value=1.5e-13 Score=106.63 Aligned_cols=178 Identities=12% Similarity=0.179 Sum_probs=126.0
Q ss_pred CCCceeeeccC--CC--eEeee-----ecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCC-
Q psy6442 4 DGKPMLRQGDT--GD--WIGTF-----EGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASA- 73 (231)
Q Consensus 4 d~~~~~~~~~~--g~--~i~~l-----~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~- 73 (231)
+..+|||.... .+ +.+.| ..|..++.+++|+. .+..+|.|+|-|-|..|||+.++.
T Consensus 120 ~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne--------------~dp~~igtSSiDTTCTiWdie~~~~ 185 (364)
T KOG0290|consen 120 SDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNE--------------VDPNLIGTSSIDTTCTIWDIETGVS 185 (364)
T ss_pred cCeEEEEeccCcCCceehhhhhccCcccccCCccccccccc--------------CCcceeEeecccCeEEEEEEeeccc
Confidence 45678888753 22 12222 24556777777765 356779999999999999999872
Q ss_pred ---ceEEEEeCCcceeEEEccCCCEEEE--EcCCeEEEEECCCcceEEee-eccc---eeEEEEEEecCCCCEEEEecCC
Q psy6442 74 ---EVQKLEFGAVPNSLEISRDGTTITV--THGSCVTFLDANSLELIKEH-KVPA---QVHSASLLLNSERPIFVCGGED 144 (231)
Q Consensus 74 ---~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~i~~~d~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~g~~d 144 (231)
..+.+.+...+.+++|...+..+++ +.+|.++++|++..+-...+ +.+. +...+++. ..+-.++|+-..|
T Consensus 186 ~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswn-kqDpnymATf~~d 264 (364)
T KOG0290|consen 186 GTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWN-KQDPNYMATFAMD 264 (364)
T ss_pred cceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccC-cCCchHHhhhhcC
Confidence 2455678899999999998776665 56899999999876543332 2222 23333331 2233345554444
Q ss_pred -CeEEEEeCCCc-ceeeeccCCCCCeeEEEEcCC-CCEEEEeeCCCcEEEEeCCC
Q psy6442 145 -LKMYKFDYSTG-AEIESFKGHFGPIHCVKFSPD-GELYASGSEDGTLRLWQTNV 196 (231)
Q Consensus 145 -~~i~~~d~~~~-~~~~~~~~h~~~V~~v~~spd-~~~laS~s~d~~v~iwd~~~ 196 (231)
..|.+.|++.. ..+.++.+|.+.|+.++|.|. ...|+||++|-.+-|||+..
T Consensus 265 S~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q 319 (364)
T KOG0290|consen 265 SNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQ 319 (364)
T ss_pred CceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEeccc
Confidence 56888898753 567889999999999999996 57999999999999999854
No 154
>KOG4378|consensus
Probab=99.57 E-value=1e-13 Score=114.47 Aligned_cols=216 Identities=13% Similarity=0.157 Sum_probs=147.4
Q ss_pred CcCCCceeeeccCCCeEeeeecccc--cEEEEEECCCCc-eeEecccccccc----------------------------
Q psy6442 2 CVDGKPMLRQGDTGDWIGTFEGHKG--CVWGVDINKDAS-KAASGAADFQAK---------------------------- 50 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l~gH~~--~V~~~~~~~~~~-~~~s~~~d~~~~---------------------------- 50 (231)
+.-.++.|||...-+....+..|+. .++++.|+.... ..++.+.|..++
T Consensus 9 S~gd~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~Cv~~~ 88 (673)
T KOG4378|consen 9 STGDKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFCVACA 88 (673)
T ss_pred ccCCceEEeecccccCccccccCCCCCcceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccchHHHHhhh
Confidence 3445788999876665555554443 389999987653 222333332111
Q ss_pred -CCCEEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCCEEE-EEcCCeEEEEECCCcceEEeeecc--ceeE
Q psy6442 51 -NNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTIT-VTHGSCVTFLDANSLELIKEHKVP--AQVH 125 (231)
Q Consensus 51 -~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~-~~~~~~i~~~d~~~~~~~~~~~~~--~~~~ 125 (231)
-..++++++..++|+|||++.+.+.+.+. +...++.|-+.-.+.+++ ++.++.|.+....+.....+++.+ ..+.
T Consensus 89 s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvR 168 (673)
T KOG4378|consen 89 SQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVR 168 (673)
T ss_pred hcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEE
Confidence 23578999999999999999777666654 456788888887776665 456778888887776665555544 2232
Q ss_pred EEEEEecC-CCCEEEEecCCCeEEEEeCCCcceeeec-cCCCCCeeEEEEcCCC-CEEEEeeCCCcEEEEeCCCCCeeee
Q psy6442 126 SASLLLNS-ERPIFVCGGEDLKMYKFDYSTGAEIESF-KGHFGPIHCVKFSPDG-ELYASGSEDGTLRLWQTNVGKTYGL 202 (231)
Q Consensus 126 ~~~~~~~~-~~~~~~~g~~d~~i~~~d~~~~~~~~~~-~~h~~~V~~v~~spd~-~~laS~s~d~~v~iwd~~~~~~~~~ 202 (231)
-+.+ ++ ...+|.+++++|.+.+||+....++..+ +.|.+|...++|+|.. .+|+|.+.|..|.+||++..+....
T Consensus 169 ll~y--s~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~ 246 (673)
T KOG4378|consen 169 LLRY--SPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDR 246 (673)
T ss_pred Eeec--ccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccce
Confidence 2222 33 3345778899999999999776666554 7899999999999965 5889999999999999998776544
Q ss_pred eeccCCcccCCCCCCcccc
Q psy6442 203 WKCIEGGLNNSLGLDSSGH 221 (231)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~ 221 (231)
+.- .+--.+++|.++|.
T Consensus 247 l~y--~~Plstvaf~~~G~ 263 (673)
T KOG4378|consen 247 LTY--SHPLSTVAFSECGT 263 (673)
T ss_pred eee--cCCcceeeecCCce
Confidence 431 22223344555444
No 155
>KOG1332|consensus
Probab=99.57 E-value=9.9e-14 Score=105.27 Aligned_cols=183 Identities=16% Similarity=0.190 Sum_probs=126.9
Q ss_pred CCcCCCceeeeccCCCe--EeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCC--CceE
Q psy6442 1 MCVDGKPMLRQGDTGDW--IGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSAS--AEVQ 76 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~--i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~--~~~~ 76 (231)
++.||+|.+|.-..|++ +..+..|++.|.+++|.|.+- +-.|+.++.||+|.|.+.... -...
T Consensus 76 csYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~waphey-------------gl~LacasSDG~vsvl~~~~~g~w~t~ 142 (299)
T KOG1332|consen 76 CSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEY-------------GLLLACASSDGKVSVLTYDSSGGWTTS 142 (299)
T ss_pred eecCceEEEEecCCCchhhhhhhhhhcccceeeccccccc-------------ceEEEEeeCCCcEEEEEEcCCCCccch
Confidence 57899999999888876 555679999999999999753 456999999999999987654 1222
Q ss_pred EE--EeCCcceeEEEccC---CC------------EEEEEcCCeEEEEECCCcceEEe--eeccc-eeEEEEEEec--CC
Q psy6442 77 KL--EFGAVPNSLEISRD---GT------------TITVTHGSCVTFLDANSLELIKE--HKVPA-QVHSASLLLN--SE 134 (231)
Q Consensus 77 ~~--~~~~~~~~v~~~~~---~~------------~~~~~~~~~i~~~d~~~~~~~~~--~~~~~-~~~~~~~~~~--~~ 134 (231)
.+ .+..-+++++|.|. |. ++..++|+.+++|+..+..-... +..+. -++...+.+. -.
T Consensus 143 ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~ 222 (299)
T KOG1332|consen 143 KIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLP 222 (299)
T ss_pred hhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCC
Confidence 22 24567899999886 31 22335688999998776422211 11111 1222233221 12
Q ss_pred CCEEEEecCCCeEEEEeCCCc-c--eeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCC
Q psy6442 135 RPIFVCGGEDLKMYKFDYSTG-A--EIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNV 196 (231)
Q Consensus 135 ~~~~~~g~~d~~i~~~d~~~~-~--~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~ 196 (231)
...++++++|+++.+|..... + ....++....++..++||+.|++|+.++.|+.|++|.-..
T Consensus 223 ~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~ 287 (299)
T KOG1332|consen 223 KSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENV 287 (299)
T ss_pred ceeeEEecCCCcEEEEEecCccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCC
Confidence 346899999999999976421 1 1122333457899999999999999999999999997543
No 156
>KOG2048|consensus
Probab=99.57 E-value=1.2e-12 Score=111.51 Aligned_cols=182 Identities=15% Similarity=0.144 Sum_probs=144.6
Q ss_pred CcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe-
Q psy6442 2 CVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF- 80 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~- 80 (231)
+.+|.|.-||+.+++.+..+..-.+.||+++.+|.+ +.++.++.||.+++.+...++......+
T Consensus 87 g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~---------------~~l~IgcddGvl~~~s~~p~~I~~~r~l~ 151 (691)
T KOG2048|consen 87 GLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPEN---------------TILAIGCDDGVLYDFSIGPDKITYKRSLM 151 (691)
T ss_pred cCCceEEEEecccCceeEEecCCCcceeEEEeCCcc---------------ceEEeecCCceEEEEecCCceEEEEeecc
Confidence 568999999999999999999889999999999974 4577788899777777777665544443
Q ss_pred --CCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeecc-------ceeEEEEEEecCCCCEEEEecCCCeEEEE
Q psy6442 81 --GAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVP-------AQVHSASLLLNSERPIFVCGGEDLKMYKF 150 (231)
Q Consensus 81 --~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~d~~i~~~ 150 (231)
...+.++.|.|++..++.+ .|+.|++||......+..++.+ .+....++.+- ....+++|...|+|..|
T Consensus 152 rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~L-rd~tI~sgDS~G~V~FW 230 (691)
T KOG2048|consen 152 RQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFL-RDSTIASGDSAGTVTFW 230 (691)
T ss_pred cccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEe-ecCcEEEecCCceEEEE
Confidence 3678999999999977665 5778999999887766643321 12222222223 23358999999999999
Q ss_pred eCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCe
Q psy6442 151 DYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKT 199 (231)
Q Consensus 151 d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~ 199 (231)
|...+.+++.+..|.+.|.+++.++++.++.+++.|+.|.-+...+.+.
T Consensus 231 d~~~gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~ 279 (691)
T KOG2048|consen 231 DSIFGTLIQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKS 279 (691)
T ss_pred cccCcchhhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCcc
Confidence 9999999999999999999999999999999999999998887766544
No 157
>KOG1036|consensus
Probab=99.56 E-value=3.7e-13 Score=105.10 Aligned_cols=156 Identities=17% Similarity=0.186 Sum_probs=119.3
Q ss_pred cccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcCCeE
Q psy6442 25 KGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCV 104 (231)
Q Consensus 25 ~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i 104 (231)
.+.|.++.|+|.+ +.|+.+++||++++||+........+.++.++.+++|.++...+..+-++.+
T Consensus 13 ~d~IS~v~f~~~~---------------~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d~~~~~~G~~dg~v 77 (323)
T KOG1036|consen 13 EDGISSVKFSPSS---------------SDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFADESTIVTGGLDGQV 77 (323)
T ss_pred hhceeeEEEcCcC---------------CcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccCCceEEEeccCceE
Confidence 5678899998753 3466677999999999999888888888999999999997777767779999
Q ss_pred EEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEee
Q psy6442 105 TFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGS 184 (231)
Q Consensus 105 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s 184 (231)
+.+|+........-....++.++.. .+....+++|++|.+|++||.+.......+. ....|.++..+ ++.|+.|+
T Consensus 78 r~~Dln~~~~~~igth~~~i~ci~~--~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d-~~kkVy~~~v~--g~~LvVg~ 152 (323)
T KOG1036|consen 78 RRYDLNTGNEDQIGTHDEGIRCIEY--SYEVGCVISGSWDKTIKFWDPRNKVVVGTFD-QGKKVYCMDVS--GNRLVVGT 152 (323)
T ss_pred EEEEecCCcceeeccCCCceEEEEe--eccCCeEEEcccCccEEEEeccccccccccc-cCceEEEEecc--CCEEEEee
Confidence 9999887655433333334444443 4566779999999999999998654455554 23478877665 45788899
Q ss_pred CCCcEEEEeCCCCCee
Q psy6442 185 EDGTLRLWQTNVGKTY 200 (231)
Q Consensus 185 ~d~~v~iwd~~~~~~~ 200 (231)
.|..|.+||+++-...
T Consensus 153 ~~r~v~iyDLRn~~~~ 168 (323)
T KOG1036|consen 153 SDRKVLIYDLRNLDEP 168 (323)
T ss_pred cCceEEEEEcccccch
Confidence 9999999999876653
No 158
>KOG2445|consensus
Probab=99.55 E-value=2.4e-13 Score=106.19 Aligned_cols=181 Identities=15% Similarity=0.247 Sum_probs=126.0
Q ss_pred CCcCCCceeeecc------CC-C--eEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCC
Q psy6442 1 MCVDGKPMLRQGD------TG-D--WIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSA 71 (231)
Q Consensus 1 ~~~d~~~~~~~~~------~g-~--~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~ 71 (231)
||.|+++.+|+-. .| + ...+|..-.+.|..+.|.|.- -+-.|++++.||++|||+.-.
T Consensus 79 cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~h-------------lGLklA~~~aDG~lRIYEA~d 145 (361)
T KOG2445|consen 79 CSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKH-------------LGLKLAAASADGILRIYEAPD 145 (361)
T ss_pred EecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchh-------------cceEEEEeccCcEEEEEecCC
Confidence 5789999999851 12 2 245577888899999999852 356799999999999998754
Q ss_pred CCce------EEEE--------eCCcceeEEEccCC---CEEEEEcCC------eEEEEECCCc--ceEEe--e-eccce
Q psy6442 72 SAEV------QKLE--------FGAVPNSLEISRDG---TTITVTHGS------CVTFLDANSL--ELIKE--H-KVPAQ 123 (231)
Q Consensus 72 ~~~~------~~~~--------~~~~~~~v~~~~~~---~~~~~~~~~------~i~~~d~~~~--~~~~~--~-~~~~~ 123 (231)
-..+ ..++ ......++.|+|.. ..++++.+. .+.+|.-... +..+. . ..+.+
T Consensus 146 p~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dp 225 (361)
T KOG2445|consen 146 PMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDP 225 (361)
T ss_pred ccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCc
Confidence 3221 2222 23456788898754 345666544 6666654332 22222 1 22346
Q ss_pred eEEEEEEecCC--CCEEEEecCCCeEEEEeCCCc--------------------ceeeeccCCCCCeeEEEEcCCCCEEE
Q psy6442 124 VHSASLLLNSE--RPIFVCGGEDLKMYKFDYSTG--------------------AEIESFKGHFGPIHCVKFSPDGELYA 181 (231)
Q Consensus 124 ~~~~~~~~~~~--~~~~~~g~~d~~i~~~d~~~~--------------------~~~~~~~~h~~~V~~v~~spd~~~la 181 (231)
+..+++.++-. -.++|+++.|| |++|.++.- +.+..+..|.++|+.+.|+-.|.+|+
T Consensus 226 I~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLs 304 (361)
T KOG2445|consen 226 IRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILS 304 (361)
T ss_pred ceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEe
Confidence 77777765433 33688899998 899887520 13456789999999999999999999
Q ss_pred EeeCCCcEEEEeCC
Q psy6442 182 SGSEDGTLRLWQTN 195 (231)
Q Consensus 182 S~s~d~~v~iwd~~ 195 (231)
|.+.||.||+|...
T Consensus 305 StGdDG~VRLWkan 318 (361)
T KOG2445|consen 305 STGDDGCVRLWKAN 318 (361)
T ss_pred ecCCCceeeehhhh
Confidence 99999999999853
No 159
>KOG0650|consensus
Probab=99.55 E-value=3.9e-13 Score=113.16 Aligned_cols=184 Identities=18% Similarity=0.315 Sum_probs=128.9
Q ss_pred eEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCC--
Q psy6442 17 WIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGT-- 94 (231)
Q Consensus 17 ~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-- 94 (231)
+--.|+||+|.|.++...|. +..|++||.||+||||.+.++.|++++++...+.+++|+|...
T Consensus 392 ~~lvyrGHtg~Vr~iSvdp~---------------G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~ 456 (733)
T KOG0650|consen 392 CALVYRGHTGLVRSISVDPS---------------GEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLC 456 (733)
T ss_pred eeeeEeccCCeEEEEEecCC---------------cceeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCce
Confidence 33457899999999999886 4568999999999999999999999999999999999999876
Q ss_pred EEEEEcCCeEEEEECCCc---------ceE-----------------------------EeeeccceeEEEEEEecCCCC
Q psy6442 95 TITVTHGSCVTFLDANSL---------ELI-----------------------------KEHKVPAQVHSASLLLNSERP 136 (231)
Q Consensus 95 ~~~~~~~~~i~~~d~~~~---------~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~ 136 (231)
.++++.+.++.+.+..-+ +.+ ..+..+.++..+. ++..|.
T Consensus 457 vLAvA~~~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vt--WHrkGD 534 (733)
T KOG0650|consen 457 VLAVAVGECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVT--WHRKGD 534 (733)
T ss_pred eEEEEecCceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceee--eecCCc
Confidence 355566666555442211 000 0011122233333 377888
Q ss_pred EEEEecCC---CeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeee-eeeccCCcccC
Q psy6442 137 IFVCGGED---LKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYG-LWKCIEGGLNN 212 (231)
Q Consensus 137 ~~~~g~~d---~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~-~~~~~~~~~~~ 212 (231)
.+++...+ ..|.+.++........|..-.+.|-++.|+|...+|..++. ..|||||+..+..+. +.+ +..+.-
T Consensus 535 YlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~t--g~kwiS 611 (733)
T KOG0650|consen 535 YLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLT--GSKWIS 611 (733)
T ss_pred eEEEeccCCCcceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhc--CCeeee
Confidence 88876543 46888998777666667667788999999999888887775 669999997755432 233 233444
Q ss_pred CCCCCccc
Q psy6442 213 SLGLDSSG 220 (231)
Q Consensus 213 ~~~~~~~~ 220 (231)
++++.+.|
T Consensus 612 ~msihp~G 619 (733)
T KOG0650|consen 612 SMSIHPNG 619 (733)
T ss_pred eeeecCCC
Confidence 44444444
No 160
>KOG2919|consensus
Probab=99.54 E-value=4.6e-13 Score=105.38 Aligned_cols=184 Identities=16% Similarity=0.200 Sum_probs=142.6
Q ss_pred cCCCceeeeccCCCeEeeeec--cccc---EEEEEECCCCceeEeccc--------------------------------
Q psy6442 3 VDGKPMLRQGDTGDWIGTFEG--HKGC---VWGVDINKDASKAASGAA-------------------------------- 45 (231)
Q Consensus 3 ~d~~~~~~~~~~g~~i~~l~g--H~~~---V~~~~~~~~~~~~~s~~~-------------------------------- 45 (231)
-|.-+.+|++.||++.++|++ |.+. -+++.|+|||.++..|-.
T Consensus 131 r~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGykrcirvFdt~RpGr~c~vy~t~~~~k~gq~gii 210 (406)
T KOG2919|consen 131 RDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGII 210 (406)
T ss_pred ccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecccceEEEeeccCCCCCCcchhhhhccccccccee
Confidence 456688999999999999874 6654 467999999998886621
Q ss_pred ---cccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCCEEEEE--cCCeEEEEECCCcce-E---
Q psy6442 46 ---DFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT--HGSCVTFLDANSLEL-I--- 115 (231)
Q Consensus 46 ---d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~--~~~~i~~~d~~~~~~-~--- 115 (231)
.+.+.+.+.++.++...++-|+.-..+.++..+. ++.-|+.++|.++|+.++.+ .+..|..||++.... +
T Consensus 211 sc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L 290 (406)
T KOG2919|consen 211 SCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYAL 290 (406)
T ss_pred eeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhh
Confidence 1223366788899999999998877777766653 56789999999999988865 467899999876432 1
Q ss_pred EeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCC-cceeeeccCCCCCeeEEEEcCCCCEEEEeeCCC
Q psy6442 116 KEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYST-GAEIESFKGHFGPIHCVKFSPDGELYASGSEDG 187 (231)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~-~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~ 187 (231)
.++... ....+-+...|.+..|++|+.+|.|++||++. +.....+..|...|+.++++|--.++|+++..+
T Consensus 291 ~rhv~~-TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssGqr 362 (406)
T KOG2919|consen 291 ERHVGD-TNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQR 362 (406)
T ss_pred hhhccC-ccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceeeeccCce
Confidence 222211 22334567789999999999999999999987 677788888999999999999988999988643
No 161
>KOG0771|consensus
Probab=99.54 E-value=1.3e-13 Score=111.45 Aligned_cols=181 Identities=22% Similarity=0.238 Sum_probs=131.1
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE- 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~- 79 (231)
++.||++|+|+-.....+.....|.+.|-.++|+|||+ .|++.+.| ..+||+..++.++....
T Consensus 162 gg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk---------------~lasig~d-~~~VW~~~~g~~~a~~t~ 225 (398)
T KOG0771|consen 162 GGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGK---------------FLASIGAD-SARVWSVNTGAALARKTP 225 (398)
T ss_pred ccccceEEEEecCcchhhhhhHhhcCccccceeCCCCc---------------EEEEecCC-ceEEEEeccCchhhhcCC
Confidence 47899999999666777777889999999999999854 57888889 99999999996665543
Q ss_pred e--CCcceeEEEccCC---CE-EEEE--cCCeEEEEECCCcce---EEeeec-cceeEEEEEEecCCCCEEEEecCCCeE
Q psy6442 80 F--GAVPNSLEISRDG---TT-ITVT--HGSCVTFLDANSLEL---IKEHKV-PAQVHSASLLLNSERPIFVCGGEDLKM 147 (231)
Q Consensus 80 ~--~~~~~~v~~~~~~---~~-~~~~--~~~~i~~~d~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~d~~i 147 (231)
. +.....+.|+.|. .. +++. ..+.++.+++..... ++..+. .......++..+.++++++.|+.++.|
T Consensus 226 ~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsV 305 (398)
T KOG0771|consen 226 FSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSV 305 (398)
T ss_pred cccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcE
Confidence 2 2344566777665 22 2222 234555555432211 111111 111122345568999999999999999
Q ss_pred EEEeCCCcceeeec-cCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCC
Q psy6442 148 YKFDYSTGAEIESF-KGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 148 ~~~d~~~~~~~~~~-~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~ 197 (231)
-+++..+-+.++.. +.|...|+.+.|+||.+++++-+.|.+++|..+...
T Consensus 306 ai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~vd 356 (398)
T KOG0771|consen 306 AIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAVD 356 (398)
T ss_pred EEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEeec
Confidence 99999887766554 689999999999999999999999999999987653
No 162
>KOG2055|consensus
Probab=99.53 E-value=8.3e-13 Score=108.06 Aligned_cols=168 Identities=18% Similarity=0.299 Sum_probs=133.8
Q ss_pred cccEEEEEECCCCceeEecccccccc-----------------------------CCC-EEEEEeCCCCEEEEeCCCCCc
Q psy6442 25 KGCVWGVDINKDASKAASGAADFQAK-----------------------------NNT-RLISCAEDKTVRLWDVSASAE 74 (231)
Q Consensus 25 ~~~V~~~~~~~~~~~~~s~~~d~~~~-----------------------------~~~-~l~s~s~D~ti~iwd~~~~~~ 74 (231)
.+.|.++.|+|....+++++.|..++ +|. ++++++.-+-+..||+.+.+.
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~ 292 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKV 292 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccc
Confidence 46899999999999999998875443 555 788888888899999987665
Q ss_pred eEEEEe----CCcceeEEEccCCCEEEE-EcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEE
Q psy6442 75 VQKLEF----GAVPNSLEISRDGTTITV-THGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYK 149 (231)
Q Consensus 75 ~~~~~~----~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~ 149 (231)
...-.. ...+....+++++++++. +..+.|.+.-..+.+.+..++.+..+...++ +.++..++..+.+|.|++
T Consensus 293 ~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~f--sSdsk~l~~~~~~GeV~v 370 (514)
T KOG2055|consen 293 TKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTF--SSDSKELLASGGTGEVYV 370 (514)
T ss_pred ccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEE--ecCCcEEEEEcCCceEEE
Confidence 432221 224567778999997665 5678999999888888888888887777666 577788888888999999
Q ss_pred EeCCCcceeeeccCCCCCe--eEEEEcCCCCEEEEeeCCCcEEEEeCC
Q psy6442 150 FDYSTGAEIESFKGHFGPI--HCVKFSPDGELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 150 ~d~~~~~~~~~~~~h~~~V--~~v~~spd~~~laS~s~d~~v~iwd~~ 195 (231)
||+++...++.+. ..+.| ++++.|+++.+||+||..|.|.|||..
T Consensus 371 ~nl~~~~~~~rf~-D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~ 417 (514)
T KOG2055|consen 371 WNLRQNSCLHRFV-DDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGN 417 (514)
T ss_pred EecCCcceEEEEe-ecCccceeeeeecCCCceEEeccCcceEEEeccc
Confidence 9999998888886 23344 567888999999999999999999953
No 163
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.53 E-value=1.5e-12 Score=111.25 Aligned_cols=193 Identities=14% Similarity=0.082 Sum_probs=120.5
Q ss_pred CCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeC---CCCEEEEeCCCCCceEEEEe
Q psy6442 4 DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAE---DKTVRLWDVSASAEVQKLEF 80 (231)
Q Consensus 4 d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~---D~ti~iwd~~~~~~~~~~~~ 80 (231)
+.++++|+.+ |.....+..|.+.|.+..|+|+|+.+ +.++. +.+|++||+.+++.......
T Consensus 183 ~~~i~i~d~d-g~~~~~lt~~~~~v~~p~wSPDG~~l---------------a~~s~~~~~~~i~i~dl~tg~~~~l~~~ 246 (429)
T PRK01742 183 PYEVRVADYD-GFNQFIVNRSSQPLMSPAWSPDGSKL---------------AYVSFENKKSQLVVHDLRSGARKVVASF 246 (429)
T ss_pred eEEEEEECCC-CCCceEeccCCCccccceEcCCCCEE---------------EEEEecCCCcEEEEEeCCCCceEEEecC
Confidence 5789999965 55567788899999999999997654 44433 34799999988765433334
Q ss_pred CCcceeEEEccCCCEEEEE--cCCeE--EEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEec-CCCeEEEEeC--C
Q psy6442 81 GAVPNSLEISRDGTTITVT--HGSCV--TFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGG-EDLKMYKFDY--S 153 (231)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~~--~~~~i--~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~d~~i~~~d~--~ 153 (231)
.......+|+||++.++.. .++.+ .++|.......+.......... ..++|++..++..+ .++...+|++ .
T Consensus 247 ~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~--~~wSpDG~~i~f~s~~~g~~~I~~~~~~ 324 (429)
T PRK01742 247 RGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTPSQLTSGAGNNTE--PSWSPDGQSILFTSDRSGSPQVYRMSAS 324 (429)
T ss_pred CCccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCeEeeccCCCCcCC--EEECCCCCEEEEEECCCCCceEEEEECC
Confidence 4445578999999977653 34544 4456655443332222222222 34488888766554 4565555554 3
Q ss_pred CcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCccccc
Q psy6442 154 TGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGHL 222 (231)
Q Consensus 154 ~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (231)
.+. ...+ .+.. ...+|+|||++|+..+.++ +.+||+.+++...+.... .....+|.++|++
T Consensus 325 ~~~-~~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~---~~~~~~~sPdG~~ 385 (429)
T PRK01742 325 GGG-ASLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTF---LDESPSISPNGIM 385 (429)
T ss_pred CCC-eEEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCC---CCCCceECCCCCE
Confidence 332 2222 3433 4578999999998888765 556999988754332221 1234456666654
No 164
>KOG2111|consensus
Probab=99.51 E-value=1e-11 Score=97.58 Aligned_cols=171 Identities=15% Similarity=0.269 Sum_probs=123.7
Q ss_pred CCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCC-CCceEEEEeCCc
Q psy6442 5 GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSA-SAEVQKLEFGAV 83 (231)
Q Consensus 5 ~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~-~~~~~~~~~~~~ 83 (231)
.+|++||....+++.+|. -..+|.++.+.++ +|+.. ....|.+|...+ -+.++.++....
T Consensus 75 NkviIWDD~k~~~i~el~-f~~~I~~V~l~r~-----------------riVvv-l~~~I~VytF~~n~k~l~~~et~~N 135 (346)
T KOG2111|consen 75 NKVIIWDDLKERCIIELS-FNSEIKAVKLRRD-----------------RIVVV-LENKIYVYTFPDNPKLLHVIETRSN 135 (346)
T ss_pred ceEEEEecccCcEEEEEE-eccceeeEEEcCC-----------------eEEEE-ecCeEEEEEcCCChhheeeeecccC
Confidence 579999988888888877 5788999998875 34433 467899999874 455555555444
Q ss_pred ceeE-EEccCCC-EEEEE---cCCeEEEEECCCcce--EEeeecc-ceeEEEEEEecCCCCEEEEecCCCe-EEEEeCCC
Q psy6442 84 PNSL-EISRDGT-TITVT---HGSCVTFLDANSLEL--IKEHKVP-AQVHSASLLLNSERPIFVCGGEDLK-MYKFDYST 154 (231)
Q Consensus 84 ~~~v-~~~~~~~-~~~~~---~~~~i~~~d~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~d~~-i~~~d~~~ 154 (231)
|..+ +.+|... .+++. .-|.+.+.|+...+. ...+..+ ..+. ++..+..|.++|+++..|+ ||+||..+
T Consensus 136 PkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Ia--cv~Ln~~Gt~vATaStkGTLIRIFdt~~ 213 (346)
T KOG2111|consen 136 PKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIA--CVALNLQGTLVATASTKGTLIRIFDTED 213 (346)
T ss_pred CCceEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCcee--EEEEcCCccEEEEeccCcEEEEEEEcCC
Confidence 4433 3344332 33332 237888888765544 2223322 2333 3445889999999999998 89999999
Q ss_pred cceeeeccC--CCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCC
Q psy6442 155 GAEIESFKG--HFGPIHCVKFSPDGELYASGSEDGTLRLWQTNV 196 (231)
Q Consensus 155 ~~~~~~~~~--h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~ 196 (231)
++++.++.. ..+.|.+++|||+..+||.+|+.|||+||.++.
T Consensus 214 g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 214 GTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred CcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence 999998852 347899999999999999999999999999865
No 165
>KOG1007|consensus
Probab=99.50 E-value=7.9e-13 Score=102.67 Aligned_cols=164 Identities=21% Similarity=0.321 Sum_probs=122.3
Q ss_pred CeEeeee-cccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCc-eEEEEe------CCcceeE
Q psy6442 16 DWIGTFE-GHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAE-VQKLEF------GAVPNSL 87 (231)
Q Consensus 16 ~~i~~l~-gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~-~~~~~~------~~~~~~v 87 (231)
++++.|. .|-|+|.++.|.|++.+ +++.. |..|.+|++..... +..+.. ....++-
T Consensus 113 E~v~~Ldteavg~i~cvew~Pns~k---------------lasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg 176 (370)
T KOG1007|consen 113 ECVASLDTEAVGKINCVEWEPNSDK---------------LASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSG 176 (370)
T ss_pred hHhhcCCHHHhCceeeEEEcCCCCe---------------eEEec-cCceEEEEcccCcchheeecccccccccceeccc
Confidence 3455554 67789999999997655 44443 88999999987655 333322 1234566
Q ss_pred EEcc--CCCEEEEEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCC-EEEEecCCCeEEEEeCCCc-ceeeeccC
Q psy6442 88 EISR--DGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERP-IFVCGGEDLKMYKFDYSTG-AEIESFKG 163 (231)
Q Consensus 88 ~~~~--~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~d~~i~~~d~~~~-~~~~~~~~ 163 (231)
+|+| ++..+.+..++++..||.++++....++....-....+.++|+.+ .++++++|+.|++||++.. .++.++.+
T Consensus 177 ~WspHHdgnqv~tt~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~ 256 (370)
T KOG1007|consen 177 AWSPHHDGNQVATTSDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPG 256 (370)
T ss_pred ccCCCCccceEEEeCCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCC
Confidence 7887 678888899999999999988776665443222223344566655 5789999999999999754 56889999
Q ss_pred CCCCeeEEEEcCC-CCEEEEeeCCCcEEEEeCC
Q psy6442 164 HFGPIHCVKFSPD-GELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 164 h~~~V~~v~~spd-~~~laS~s~d~~v~iwd~~ 195 (231)
|.--|++|.|+|. .+++.|++.|..|.+|...
T Consensus 257 HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~ 289 (370)
T KOG1007|consen 257 HSHWVWAVRFNPEHDQLILSGGSDSAVNLSCAS 289 (370)
T ss_pred CceEEEEEEecCccceEEEecCCCceeEEEecc
Confidence 9999999999996 5789999999999999874
No 166
>KOG0649|consensus
Probab=99.50 E-value=6.8e-13 Score=100.81 Aligned_cols=164 Identities=18% Similarity=0.225 Sum_probs=113.2
Q ss_pred ccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCC---------C-ceEE-EEeCCcceeEEEccCCC
Q psy6442 26 GCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSAS---------A-EVQK-LEFGAVPNSLEISRDGT 94 (231)
Q Consensus 26 ~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~---------~-~~~~-~~~~~~~~~v~~~~~~~ 94 (231)
.+|++-+++|. +++|+.++.+|+|-+..+.+- + .+.. -.++.+++.+++.. .
T Consensus 11 ~tvf~qa~sp~---------------~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d--~ 73 (325)
T KOG0649|consen 11 NTVFAQAISPS---------------KQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHD--D 73 (325)
T ss_pred HHHHHHhhCCc---------------ceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeeh--h
Confidence 45666677775 445788899999999987531 1 1111 12456788888883 3
Q ss_pred EEEEEcCCeEEEEECCCcce------EEeeec-------cc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeee
Q psy6442 95 TITVTHGSCVTFLDANSLEL------IKEHKV-------PA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIES 160 (231)
Q Consensus 95 ~~~~~~~~~i~~~d~~~~~~------~~~~~~-------~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~ 160 (231)
.++.+.++.++=|..+.... +.+... +. +++++. ..|...-++.++.|+.++.||+++|+...+
T Consensus 74 ~Lls~gdG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~--ldP~enSi~~AgGD~~~y~~dlE~G~i~r~ 151 (325)
T KOG0649|consen 74 FLLSGGDGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMW--LDPSENSILFAGGDGVIYQVDLEDGRIQRE 151 (325)
T ss_pred heeeccCceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeE--eccCCCcEEEecCCeEEEEEEecCCEEEEE
Confidence 45555668887766543222 111111 11 234433 355544455666899999999999999999
Q ss_pred ccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCC
Q psy6442 161 FKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEG 208 (231)
Q Consensus 161 ~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~ 208 (231)
+.||++.|+++.--.....+.||++||++||||.+++|-.+..+.+.+
T Consensus 152 ~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~ 199 (325)
T KOG0649|consen 152 YRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKN 199 (325)
T ss_pred EcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccC
Confidence 999999999999866666788999999999999999998876655443
No 167
>KOG1034|consensus
Probab=99.49 E-value=1.5e-12 Score=102.61 Aligned_cols=167 Identities=17% Similarity=0.268 Sum_probs=114.8
Q ss_pred ecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE------eCCcceeEEEccCCC-
Q psy6442 22 EGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE------FGAVPNSLEISRDGT- 94 (231)
Q Consensus 22 ~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~------~~~~~~~v~~~~~~~- 94 (231)
.+|..+|+.++|++=.. ....+.++|+|. ..+.+|......-.+.++ .+...+.++|+.+-.
T Consensus 35 ed~~~~I~gv~fN~~~~----------~~e~~vfatvG~-~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~ 103 (385)
T KOG1034|consen 35 EDHNKPIFGVAFNSFLG----------CDEPQVFATVGG-NRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNT 103 (385)
T ss_pred ccCCCccceeeeehhcC----------CCCCceEEEeCC-cEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCC
Confidence 47889999999984110 011233444443 345555543322222222 234567888876543
Q ss_pred ---EEEE-EcCCeEEEEECCCcceEEeeeccc-eeEEEEEEecC-CCCEEEEecCCCeEEEEeCCCcceeee---ccCCC
Q psy6442 95 ---TITV-THGSCVTFLDANSLELIKEHKVPA-QVHSASLLLNS-ERPIFVCGGEDLKMYKFDYSTGAEIES---FKGHF 165 (231)
Q Consensus 95 ---~~~~-~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~g~~d~~i~~~d~~~~~~~~~---~~~h~ 165 (231)
++++ +.-+.|++.|....+....+.... .++.+.. .| +.+++++++.|..|++|+..+..++.. ++||.
T Consensus 104 ~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~--~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHr 181 (385)
T KOG1034|consen 104 GNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKF--HPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHR 181 (385)
T ss_pred CCeeEEeecceeEEEEEecchhhhccceeccCccchhhhc--CCCCCcEEEEecCCceEEEEeccCCeEEEEeccccccc
Confidence 2333 345789999998887776665543 4444444 34 446788999999999999999988765 47899
Q ss_pred CCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeee
Q psy6442 166 GPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYG 201 (231)
Q Consensus 166 ~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~ 201 (231)
+.|.++.|+++|.+++||+.|-+|++|++...+...
T Consensus 182 deVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~ 217 (385)
T KOG1034|consen 182 DEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKN 217 (385)
T ss_pred CcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhh
Confidence 999999999999999999999999999998665443
No 168
>KOG2919|consensus
Probab=99.49 E-value=2e-12 Score=101.86 Aligned_cols=148 Identities=15% Similarity=0.277 Sum_probs=112.0
Q ss_pred CCCEEEEEeCCCCEEEEeCCCCCceEEEEe---C---CcceeEEEccCCCEEEEEcCCeEEEEECC-CcceEEe-----e
Q psy6442 51 NNTRLISCAEDKTVRLWDVSASAEVQKLEF---G---AVPNSLEISRDGTTITVTHGSCVTFLDAN-SLELIKE-----H 118 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~---~---~~~~~v~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~~-----~ 118 (231)
+...+++.+.|.-|++||..+++....... . ....+++|+|||..++++..++|+++|+. ++..-.. .
T Consensus 122 ~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGykrcirvFdt~RpGr~c~vy~t~~~ 201 (406)
T KOG2919|consen 122 STNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYKRCIRVFDTSRPGRDCPVYTTVTK 201 (406)
T ss_pred ccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecccceEEEeeccCCCCCCcchhhhhc
Confidence 345678889999999999999987655532 2 23569999999999999999999999984 3322111 1
Q ss_pred -eccceeEEEEEEecCCCC-EEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeC-CCcEEEEeCC
Q psy6442 119 -KVPAQVHSASLLLNSERP-IFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSE-DGTLRLWQTN 195 (231)
Q Consensus 119 -~~~~~~~~~~~~~~~~~~-~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~-d~~v~iwd~~ 195 (231)
+....-...++.++|... +++.|+...++-++.-..+.++..+-+|.+-|+.+.|.++|+.|.+|++ |..|-.||++
T Consensus 202 ~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR 281 (406)
T KOG2919|consen 202 GKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIR 281 (406)
T ss_pred ccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeeh
Confidence 111222233455566655 7889988888777777677888888999999999999999999999985 7789999996
Q ss_pred CCC
Q psy6442 196 VGK 198 (231)
Q Consensus 196 ~~~ 198 (231)
.-+
T Consensus 282 ~~~ 284 (406)
T KOG2919|consen 282 YSR 284 (406)
T ss_pred hcc
Confidence 544
No 169
>KOG1063|consensus
Probab=99.48 E-value=1.7e-12 Score=110.92 Aligned_cols=182 Identities=14% Similarity=0.198 Sum_probs=129.5
Q ss_pred CcCCCceeeeccCCC--eEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCC------
Q psy6442 2 CVDGKPMLRQGDTGD--WIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASA------ 73 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~--~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~------ 73 (231)
+.+-.+.+.+..+++ .++.|+||.+.|.+++|+..+. +...|+|+|.|+.||||.+.-+.
T Consensus 166 gs~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~------------~~~~laS~SQD~yIRiW~i~~~~~~~~~~ 233 (764)
T KOG1063|consen 166 GSKFVVDLYSSSADSFARVAELEGHTDWIRSLAFARLGG------------DDLLLASSSQDRYIRIWRIVLGDDEDSNE 233 (764)
T ss_pred CcceEEEEeccCCcceeEEEEeeccchhhhhhhhhccCC------------CcEEEEecCCceEEEEEEEEecCCccccc
Confidence 445555566554443 4777999999999999987542 34569999999999999864222
Q ss_pred ---------------ceEEEE-----------eCCcceeEEEccCCC-EEEEEcCCeEEEEECCCcceEEee--ec---c
Q psy6442 74 ---------------EVQKLE-----------FGAVPNSLEISRDGT-TITVTHGSCVTFLDANSLELIKEH--KV---P 121 (231)
Q Consensus 74 ---------------~~~~~~-----------~~~~~~~v~~~~~~~-~~~~~~~~~i~~~d~~~~~~~~~~--~~---~ 121 (231)
...++. +...++++.|+|++. .+.++.|.++.+|...+..-+..- +. .
T Consensus 234 ~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~g 313 (764)
T KOG1063|consen 234 REDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVG 313 (764)
T ss_pred cccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeeccc
Confidence 111111 346789999999995 566678899999987654322221 11 1
Q ss_pred -ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc---ceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCC
Q psy6442 122 -AQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG---AEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 122 -~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~---~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~ 195 (231)
.........+++++.++++-+..|-.++|-.+.. .......||.+.|.+++|+|.|.+|.|++.|.|-|||-.-
T Consensus 314 g~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~w 391 (764)
T KOG1063|consen 314 GSAGGFWGGLWSPNSNVIIAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARW 391 (764)
T ss_pred ccccceeeEEEcCCCCEEEEecccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeeccc
Confidence 1111233445888888999899999999973322 2234457999999999999999999999999999999765
No 170
>KOG2096|consensus
Probab=99.46 E-value=3.5e-12 Score=100.32 Aligned_cols=175 Identities=16% Similarity=0.241 Sum_probs=125.7
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCC---CCC---c
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVS---ASA---E 74 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~---~~~---~ 74 (231)
++.|-++-||+++ |+++.+..--+..-+..+.+|+| ..|++++.---|++|.+- +|+ .
T Consensus 205 as~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~G---------------RFia~~gFTpDVkVwE~~f~kdG~fqev 268 (420)
T KOG2096|consen 205 ASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDG---------------RFIAVSGFTPDVKVWEPIFTKDGTFQEV 268 (420)
T ss_pred ecCCCcEEEEecC-CceeeeeccccccccceeeCCCC---------------cEEEEecCCCCceEEEEEeccCcchhhh
Confidence 4788999999988 99999876656666677788875 457888888889999863 221 1
Q ss_pred eEEEE---eCCcceeEEEccCCCEE-EEEcCCeEEEEECCC-------cceEEeeecc---ceeEEEEEEecCCCCEEEE
Q psy6442 75 VQKLE---FGAVPNSLEISRDGTTI-TVTHGSCVTFLDANS-------LELIKEHKVP---AQVHSASLLLNSERPIFVC 140 (231)
Q Consensus 75 ~~~~~---~~~~~~~v~~~~~~~~~-~~~~~~~i~~~d~~~-------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 140 (231)
.+.++ +...+..++|+++...+ .++.++..++||..- ...+++...+ .....+.+..+|.++.++.
T Consensus 269 ~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~ 348 (420)
T KOG2096|consen 269 KRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAV 348 (420)
T ss_pred hhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEe
Confidence 22233 34678999999998764 568899999999752 1122221111 1122234555888887766
Q ss_pred ecCCCeEEEEeCCCcceeeecc-CCCCCeeEEEEcCCCCEEEEeeCCCcEEEEe
Q psy6442 141 GGEDLKMYKFDYSTGAEIESFK-GHFGPIHCVKFSPDGELYASGSEDGTLRLWQ 193 (231)
Q Consensus 141 g~~d~~i~~~d~~~~~~~~~~~-~h~~~V~~v~~spd~~~laS~s~d~~v~iwd 193 (231)
. ....++++..++++...+++ .|...|.+++|+|+|++++||+ |+.++++.
T Consensus 349 s-~gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~ 400 (420)
T KOG2096|consen 349 S-FGSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG-DRYVRVIR 400 (420)
T ss_pred e-cCCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec-ceeeeeec
Confidence 4 45678888888888777774 6899999999999999999988 67788876
No 171
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.46 E-value=2.6e-11 Score=92.55 Aligned_cols=159 Identities=16% Similarity=0.245 Sum_probs=103.9
Q ss_pred EEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCC-CCceEEEEe--CCcceeEEEccCCCEEEEEc---CCe
Q psy6442 30 GVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSA-SAEVQKLEF--GAVPNSLEISRDGTTITVTH---GSC 103 (231)
Q Consensus 30 ~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~-~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~---~~~ 103 (231)
.+.|+++|+.++.-........++..+ +...+|.++. +.....+.+ ..++.+++|+|++..+++.. ...
T Consensus 10 ~~~W~~~G~~l~~~~~~~~~~~~ks~~-----~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~ 84 (194)
T PF08662_consen 10 KLHWQPSGDYLLVKVQTRVDKSGKSYY-----GEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAK 84 (194)
T ss_pred EEEecccCCEEEEEEEEeeccCcceEE-----eeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcc
Confidence 567888887665332211111122222 3345555532 233444444 34699999999999876543 358
Q ss_pred EEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecC---CCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEE
Q psy6442 104 VTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGE---DLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELY 180 (231)
Q Consensus 104 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~l 180 (231)
+.+||.. .+.+..+.. ...+.+ .++|+|++++.++. .|.+.+||..+.+.+.+++ |. .+..++|||||++|
T Consensus 85 v~lyd~~-~~~i~~~~~-~~~n~i--~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~~-~~t~~~WsPdGr~~ 158 (194)
T PF08662_consen 85 VTLYDVK-GKKIFSFGT-QPRNTI--SWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-HS-DATDVEWSPDGRYL 158 (194)
T ss_pred cEEEcCc-ccEeEeecC-CCceEE--EECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc-cC-cEEEEEEcCCCCEE
Confidence 9999986 344444332 233444 45899999988764 4679999999888887765 33 47899999999999
Q ss_pred EEeeC------CCcEEEEeCCCCCee
Q psy6442 181 ASGSE------DGTLRLWQTNVGKTY 200 (231)
Q Consensus 181 aS~s~------d~~v~iwd~~~~~~~ 200 (231)
+++.. |+.++||+.. |+.+
T Consensus 159 ~ta~t~~r~~~dng~~Iw~~~-G~~l 183 (194)
T PF08662_consen 159 ATATTSPRLRVDNGFKIWSFQ-GRLL 183 (194)
T ss_pred EEEEeccceeccccEEEEEec-CeEe
Confidence 99874 7889999984 5543
No 172
>KOG2110|consensus
Probab=99.46 E-value=3.7e-11 Score=96.15 Aligned_cols=144 Identities=18% Similarity=0.340 Sum_probs=111.2
Q ss_pred CCCEEEEEeCCCCEEEEeCCCCCceEEEEeC-Ccce-eEEEccCC--CEEEEE---cCCeEEEEECCCcceEEeeeccc-
Q psy6442 51 NNTRLISCAEDKTVRLWDVSASAEVQKLEFG-AVPN-SLEISRDG--TTITVT---HGSCVTFLDANSLELIKEHKVPA- 122 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~-~~~~-~v~~~~~~--~~~~~~---~~~~i~~~d~~~~~~~~~~~~~~- 122 (231)
+-++|+.+=.+. |.|||+++.+.+.++... +.+. .++++|+. .+++.. ..+.+.+||..+.+....+..+.
T Consensus 96 Nr~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~ 174 (391)
T KOG2110|consen 96 NRKRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKG 174 (391)
T ss_pred ccceEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCC
Confidence 345788887765 999999999998888653 4443 44555544 455542 34789999998887777766543
Q ss_pred eeEEEEEEecCCCCEEEEecCCCe-EEEEeCCCcceeeeccCC--CCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCC
Q psy6442 123 QVHSASLLLNSERPIFVCGGEDLK-MYKFDYSTGAEIESFKGH--FGPIHCVKFSPDGELYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~g~~d~~-i~~~d~~~~~~~~~~~~h--~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~ 197 (231)
.+ .++.++++|.++|++++.|+ ||+|.+.+|+.+.+|..- ...|.+++|+|++++|++.|..++|+||.+...
T Consensus 175 ~l--Aalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~ 250 (391)
T KOG2110|consen 175 PL--AALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKV 250 (391)
T ss_pred ce--eEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEeccc
Confidence 33 34556999999999999998 889999999999998633 245789999999999999999999999998654
No 173
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.44 E-value=6.3e-11 Score=101.26 Aligned_cols=198 Identities=13% Similarity=0.070 Sum_probs=126.4
Q ss_pred CceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcce
Q psy6442 6 KPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPN 85 (231)
Q Consensus 6 ~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~ 85 (231)
++++++.+ |...+.+..+.+.+.+..|+|||+.++..+ ..+.+..+.+||+.+++......+.....
T Consensus 180 ~l~~~d~d-g~~~~~lt~~~~~~~~p~wSPDG~~la~~s------------~~~g~~~i~i~dl~~G~~~~l~~~~~~~~ 246 (429)
T PRK03629 180 ELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVT------------FESGRSALVIQTLANGAVRQVASFPRHNG 246 (429)
T ss_pred eEEEEcCC-CCCCEEeecCCCceeeeEEcCCCCEEEEEE------------ecCCCcEEEEEECCCCCeEEccCCCCCcC
Confidence 57788755 555555666778899999999987654211 01224578899998876544444455556
Q ss_pred eEEEccCCCEEEEE--cC--CeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCC-C--eEEEEeCCCccee
Q psy6442 86 SLEISRDGTTITVT--HG--SCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGED-L--KMYKFDYSTGAEI 158 (231)
Q Consensus 86 ~v~~~~~~~~~~~~--~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d-~--~i~~~d~~~~~~~ 158 (231)
...|+||++.++.. .+ ..|.+||..+....+....+.... ...++|+++.++..+.+ + .|+.+|+..+..
T Consensus 247 ~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~~~~~--~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~- 323 (429)
T PRK03629 247 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNT--EPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP- 323 (429)
T ss_pred CeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEccCCCCCcC--ceEECCCCCEEEEEeCCCCCceEEEEECCCCCe-
Confidence 78999999987653 22 258889987765544333332222 33458899887766543 2 577778766543
Q ss_pred eeccCCCCCeeEEEEcCCCCEEEEeeCC---CcEEEEeCCCCCeeeeeeccCCcccCCCCCCccccc
Q psy6442 159 ESFKGHFGPIHCVKFSPDGELYASGSED---GTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGHL 222 (231)
Q Consensus 159 ~~~~~h~~~V~~v~~spd~~~laS~s~d---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (231)
..+..+........|||||++|+..+.+ ..|.+||+.+++...+ +.. ......+|.++|.+
T Consensus 324 ~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~~L-t~~--~~~~~p~~SpDG~~ 387 (429)
T PRK03629 324 QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL-TDT--FLDETPSIAPNGTM 387 (429)
T ss_pred EEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeEEe-CCC--CCCCCceECCCCCE
Confidence 3333344456678999999988876643 3588899988875533 221 12234556666654
No 174
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.44 E-value=5.6e-11 Score=98.18 Aligned_cols=177 Identities=12% Similarity=0.142 Sum_probs=115.7
Q ss_pred CcCCCceeeeccC-CC--eEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCC-CCc--e
Q psy6442 2 CVDGKPMLRQGDT-GD--WIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSA-SAE--V 75 (231)
Q Consensus 2 ~~d~~~~~~~~~~-g~--~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~-~~~--~ 75 (231)
+.|+.|++|+..+ |+ ++.++. +.+....+.++|+++.+ ++++..++.|.+|++.. ++. .
T Consensus 9 ~~~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd~~~l--------------yv~~~~~~~i~~~~~~~~g~l~~~ 73 (330)
T PRK11028 9 PESQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPDKRHL--------------YVGVRPEFRVLSYRIADDGALTFA 73 (330)
T ss_pred CCCCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCCCCEE--------------EEEECCCCcEEEEEECCCCceEEe
Confidence 4688999999853 54 566665 34556778899986654 23334578899999863 332 2
Q ss_pred EEEEeCCcceeEEEccCCCEEEEEc--CCeEEEEECCCcc----eEEeeeccceeEEEEEEecCCCCEEE-EecCCCeEE
Q psy6442 76 QKLEFGAVPNSLEISRDGTTITVTH--GSCVTFLDANSLE----LIKEHKVPAQVHSASLLLNSERPIFV-CGGEDLKMY 148 (231)
Q Consensus 76 ~~~~~~~~~~~v~~~~~~~~~~~~~--~~~i~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~d~~i~ 148 (231)
........+..++++|+++.++++. ++.+.+|+..... .+.........+.+ ..+|+++.+. +...+..|+
T Consensus 74 ~~~~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~--~~~p~g~~l~v~~~~~~~v~ 151 (330)
T PRK11028 74 AESPLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSA--NIDPDNRTLWVPCLKEDRIR 151 (330)
T ss_pred eeecCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEe--EeCCCCCEEEEeeCCCCEEE
Confidence 2233445678999999999888764 5788999876322 12222111223333 3478887765 455668999
Q ss_pred EEeCCCcceee-------eccCCCCCeeEEEEcCCCCEEEEeeC-CCcEEEEeCCC
Q psy6442 149 KFDYSTGAEIE-------SFKGHFGPIHCVKFSPDGELYASGSE-DGTLRLWQTNV 196 (231)
Q Consensus 149 ~~d~~~~~~~~-------~~~~h~~~V~~v~~spd~~~laS~s~-d~~v~iwd~~~ 196 (231)
+||+.+...+. .... ......++|+|+++++.++.+ +++|.+|++..
T Consensus 152 v~d~~~~g~l~~~~~~~~~~~~-g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~ 206 (330)
T PRK11028 152 LFTLSDDGHLVAQEPAEVTTVE-GAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKD 206 (330)
T ss_pred EEEECCCCcccccCCCceecCC-CCCCceEEECCCCCEEEEEecCCCEEEEEEEeC
Confidence 99997632221 1111 234578999999998877765 99999999973
No 175
>KOG4328|consensus
Probab=99.44 E-value=3.1e-12 Score=104.68 Aligned_cols=174 Identities=14% Similarity=0.143 Sum_probs=122.6
Q ss_pred CCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCc----eEE-EEeCCcceeEE
Q psy6442 14 TGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAE----VQK-LEFGAVPNSLE 88 (231)
Q Consensus 14 ~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~----~~~-~~~~~~~~~v~ 88 (231)
+-+.....+-|.++|+++.|+|-.+ -+.+++|..-|+|-+||+...+. +.. ..+..+|.++.
T Consensus 175 ~~~~~~v~kv~~~Rit~l~fHPt~~-------------~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~ 241 (498)
T KOG4328|consen 175 DYRILNVAKVTDRRITSLAFHPTEN-------------RKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLK 241 (498)
T ss_pred cceecceeEecccceEEEEecccCc-------------ceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceE
Confidence 3344556778999999999999642 25688999999999999963221 112 23456799999
Q ss_pred EccCCC--EEEEEcCCeEEEEECCCcceEEeeecc-ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcc-eeeeccCC
Q psy6442 89 ISRDGT--TITVTHGSCVTFLDANSLELIKEHKVP-AQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA-EIESFKGH 164 (231)
Q Consensus 89 ~~~~~~--~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~-~~~~~~~h 164 (231)
|+|... .+..+.+|+|++.|......-...... .......+.++.+...++.+..=|...+||+++.. ....+.-|
T Consensus 242 F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh 321 (498)
T KOG4328|consen 242 FSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLH 321 (498)
T ss_pred ecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhh
Confidence 999764 455678999999987654322212211 12222334445666666776666688899998654 36667779
Q ss_pred CCCeeEEEEcCC-CCEEEEeeCCCcEEEEeCCCCCee
Q psy6442 165 FGPIHCVKFSPD-GELYASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 165 ~~~V~~v~~spd-~~~laS~s~d~~v~iwd~~~~~~~ 200 (231)
...|++|+++|. ..+||||+.|++++|||++.-...
T Consensus 322 ~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K 358 (498)
T KOG4328|consen 322 KKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGK 358 (498)
T ss_pred hcccceeecCCCCchheeecccCcceeeeehhhhcCC
Confidence 899999999996 568999999999999998765543
No 176
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.43 E-value=2.6e-10 Score=95.36 Aligned_cols=187 Identities=21% Similarity=0.305 Sum_probs=128.9
Q ss_pred cCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCC
Q psy6442 3 VDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGA 82 (231)
Q Consensus 3 ~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~ 82 (231)
.+|+|.+.|..+.+.+.++..+...-..+.|+|||+ +++.++.|+.|-++|+.+++.+.++..+.
T Consensus 14 ~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr---------------~~yv~~rdg~vsviD~~~~~~v~~i~~G~ 78 (369)
T PF02239_consen 14 GSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGR---------------YLYVANRDGTVSVIDLATGKVVATIKVGG 78 (369)
T ss_dssp GGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SS---------------EEEEEETTSEEEEEETTSSSEEEEEE-SS
T ss_pred CCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCC---------------EEEEEcCCCeEEEEECCcccEEEEEecCC
Confidence 578999999999999999886544433467888754 46777899999999999999999999999
Q ss_pred cceeEEEccCCCEEEEEc--CCeEEEEECCCcceEEeeeccc------eeEEEEEEecCCCCEE-EEecCCCeEEEEeCC
Q psy6442 83 VPNSLEISRDGTTITVTH--GSCVTFLDANSLELIKEHKVPA------QVHSASLLLNSERPIF-VCGGEDLKMYKFDYS 153 (231)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~--~~~i~~~d~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~g~~d~~i~~~d~~ 153 (231)
.+..+++++||+.+++++ .+.+.++|..+.+.++.+.... ......+...+....+ ++--+.+.|++.|..
T Consensus 79 ~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~ 158 (369)
T PF02239_consen 79 NPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYS 158 (369)
T ss_dssp EEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETT
T ss_pred CcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEec
Confidence 999999999999988764 5899999999998888765421 1122233345666644 444556899999976
Q ss_pred Ccceee-eccCCCCCeeEEEEcCCCCEEEE-eeCCCcEEEEeCCCCCeeeeee
Q psy6442 154 TGAEIE-SFKGHFGPIHCVKFSPDGELYAS-GSEDGTLRLWQTNVGKTYGLWK 204 (231)
Q Consensus 154 ~~~~~~-~~~~h~~~V~~v~~spd~~~laS-~s~d~~v~iwd~~~~~~~~~~~ 204 (231)
....+. +............|+|++++++. +-..+.|-++|..+++......
T Consensus 159 d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~ 211 (369)
T PF02239_consen 159 DPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALID 211 (369)
T ss_dssp TSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred cccccceeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEee
Confidence 654332 22224456788999999997655 4567789999999988776553
No 177
>KOG1063|consensus
Probab=99.43 E-value=2.7e-12 Score=109.61 Aligned_cols=183 Identities=19% Similarity=0.297 Sum_probs=125.8
Q ss_pred CCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCC-
Q psy6442 4 DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGA- 82 (231)
Q Consensus 4 d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~- 82 (231)
...|.+|++.+-....++.||+.+|.++.|=|..+. ...++||+.|++|++|.++....+....++.
T Consensus 33 ~~~Iav~dp~k~~i~t~l~GH~a~VnC~~~l~~s~~------------~a~~vsG~sD~~v~lW~l~~~~~~~i~~~~g~ 100 (764)
T KOG1063|consen 33 GPAIAVADPEKILIVTTLDGHVARVNCVHWLPTSEI------------VAEMVSGDSDGRVILWKLRDEYLIKIYTIQGH 100 (764)
T ss_pred CceEEEeCcccceeEEeccCCccceEEEEEcccccc------------cceEEEccCCCcEEEEEEeehheEEEEeecCc
Confidence 346778888766567778999999999999886542 1269999999999999998655544444443
Q ss_pred cceeEEEccCCCEEEE-EcCCeEEEEECCCcc--eEEeeeccc-eeE--EEEEEecCCCCEEEEecCCCeEEEEeCCCc-
Q psy6442 83 VPNSLEISRDGTTITV-THGSCVTFLDANSLE--LIKEHKVPA-QVH--SASLLLNSERPIFVCGGEDLKMYKFDYSTG- 155 (231)
Q Consensus 83 ~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~--~~~~~~~~~-~~~--~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~- 155 (231)
....+++...-....+ +.++.+.+|+....+ +....+... ... ++....+++..+++.|+.+..|.++-....
T Consensus 101 ~~~~~cv~a~~~~~~~~~ad~~v~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d~ 180 (764)
T KOG1063|consen 101 CKECVCVVARSSVMTCKAADGTVSVWDKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSSSADS 180 (764)
T ss_pred ceeEEEEEeeeeEEEeeccCceEEEeecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEeccCCcc
Confidence 3344444433223322 467889999985555 222222221 111 122223445556778888888888865432
Q ss_pred -ceeeeccCCCCCeeEEEEcCCCC---EEEEeeCCCcEEEEeCCCCC
Q psy6442 156 -AEIESFKGHFGPIHCVKFSPDGE---LYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 156 -~~~~~~~~h~~~V~~v~~spd~~---~laS~s~d~~v~iwd~~~~~ 198 (231)
+....++||.+-|++++|...+. +|||+|.|..||||.+.-+.
T Consensus 181 f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~ 227 (764)
T KOG1063|consen 181 FARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGD 227 (764)
T ss_pred eeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecC
Confidence 45678899999999999998654 89999999999999986544
No 178
>KOG2106|consensus
Probab=99.43 E-value=2.3e-11 Score=100.87 Aligned_cols=195 Identities=16% Similarity=0.261 Sum_probs=136.1
Q ss_pred CCCceeeeccCCCeEee---eeccc-ccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEE-
Q psy6442 4 DGKPMLRQGDTGDWIGT---FEGHK-GCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKL- 78 (231)
Q Consensus 4 d~~~~~~~~~~g~~i~~---l~gH~-~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~- 78 (231)
.|-+.+|+...|.+..+ |+++. ..|.++.|.++|+ ++|+..+|+|.||+....+..+..
T Consensus 221 k~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engd----------------viTgDS~G~i~Iw~~~~~~~~k~~~ 284 (626)
T KOG2106|consen 221 KGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGD----------------VITGDSGGNILIWSKGTNRISKQVH 284 (626)
T ss_pred CceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCC----------------EEeecCCceEEEEeCCCceEEeEee
Confidence 45678999988877554 55554 4699999998764 789999999999999776655444
Q ss_pred EeCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCccee
Q psy6442 79 EFGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEI 158 (231)
Q Consensus 79 ~~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~ 158 (231)
.++..+.+++.-.+|..+....|..|..|| ...+.+++.+.|.............+. ++.|.....|..=.+..+..+
T Consensus 285 aH~ggv~~L~~lr~GtllSGgKDRki~~Wd-~~y~k~r~~elPe~~G~iRtv~e~~~d-i~vGTtrN~iL~Gt~~~~f~~ 362 (626)
T KOG2106|consen 285 AHDGGVFSLCMLRDGTLLSGGKDRKIILWD-DNYRKLRETELPEQFGPIRTVAEGKGD-ILVGTTRNFILQGTLENGFTL 362 (626)
T ss_pred ecCCceEEEEEecCccEeecCccceEEecc-ccccccccccCchhcCCeeEEecCCCc-EEEeeccceEEEeeecCCceE
Confidence 457789999999999998866678999999 444555666655432222222222333 566655555554444444332
Q ss_pred eeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCcccc
Q psy6442 159 ESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGH 221 (231)
Q Consensus 159 ~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (231)
+..+|....+.++.+|+..+|++|+.|+.++||+ .-| -.|+-....-+-...|.++||
T Consensus 363 -~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k--~~wt~~~~d~~~~~~fhpsg~ 420 (626)
T KOG2106|consen 363 -TVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHK--LEWTKIIEDPAECADFHPSGV 420 (626)
T ss_pred -EEEecccceeeEEcCCChhheeeccCcceEEEcc--CCc--eeEEEEecCceeEeeccCcce
Confidence 3357999999999999999999999999999999 223 245444444445556777663
No 179
>KOG0307|consensus
Probab=99.42 E-value=7.7e-13 Score=118.30 Aligned_cols=184 Identities=16% Similarity=0.165 Sum_probs=137.3
Q ss_pred CCcCCCceeeeccCCCeEeeeec--ccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEE
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEG--HKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKL 78 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~g--H~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~ 78 (231)
|+.||++.+||.+.-+.-.++.. -.+.|.++.|+..- ...|++++.+|.+-|||++.++.+..+
T Consensus 135 Ga~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkv--------------qhILAS~s~sg~~~iWDlr~~~pii~l 200 (1049)
T KOG0307|consen 135 GADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKV--------------SHILASGSPSGRAVIWDLRKKKPIIKL 200 (1049)
T ss_pred cCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhh--------------hHHhhccCCCCCceeccccCCCccccc
Confidence 57899999999876444444421 35679999998753 345899999999999999998777665
Q ss_pred EeCC---cceeEEEccCCCE-EEE-EcC---CeEEEEECCCcce-EEeeeccc-eeEEEEEEecCCCCEEEEecCCCeEE
Q psy6442 79 EFGA---VPNSLEISRDGTT-ITV-THG---SCVTFLDANSLEL-IKEHKVPA-QVHSASLLLNSERPIFVCGGEDLKMY 148 (231)
Q Consensus 79 ~~~~---~~~~v~~~~~~~~-~~~-~~~---~~i~~~d~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~ 148 (231)
.... ....++|+|+... +++ +.+ -+|.+||++.... ++..+.+. .+.++.| ...+..++++.+.|++|.
T Consensus 201 s~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsW-c~~D~~lllSsgkD~~ii 279 (1049)
T KOG0307|consen 201 SDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSW-CPQDPRLLLSSGKDNRII 279 (1049)
T ss_pred ccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeecc-CCCCchhhhcccCCCCee
Confidence 4432 3668999999863 433 333 3889999775433 33443322 3444444 234557899999999999
Q ss_pred EEeCCCcceeeeccCCCCCeeEEEEcCCC-CEEEEeeCCCcEEEEeCCCCCe
Q psy6442 149 KFDYSTGAEIESFKGHFGPIHCVKFSPDG-ELYASGSEDGTLRLWQTNVGKT 199 (231)
Q Consensus 149 ~~d~~~~~~~~~~~~h~~~V~~v~~spd~-~~laS~s~d~~v~iwd~~~~~~ 199 (231)
+|+.++++.+..+.....-+..+.|.|.. ..++.++-||.|-|+.+..+..
T Consensus 280 ~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~~ 331 (1049)
T KOG0307|consen 280 CWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTDT 331 (1049)
T ss_pred EecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeeecCCc
Confidence 99999999999998777789999999965 4889999999999999877653
No 180
>KOG2111|consensus
Probab=99.42 E-value=1.9e-11 Score=96.07 Aligned_cols=161 Identities=18% Similarity=0.258 Sum_probs=121.3
Q ss_pred CCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcCCeEEEEECC-CcceEEeeeccc-eeEEEEEEecCCCCEEE
Q psy6442 62 KTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDAN-SLELIKEHKVPA-QVHSASLLLNSERPIFV 139 (231)
Q Consensus 62 ~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 139 (231)
..|.|||-...+++.++.+..++.+|.+.++ .+++...+.|.+|.-. +.+.++.++... +-..+++.......+++
T Consensus 75 NkviIWDD~k~~~i~el~f~~~I~~V~l~r~--riVvvl~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~La 152 (346)
T KOG2111|consen 75 NKVIIWDDLKERCIIELSFNSEIKAVKLRRD--RIVVVLENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLA 152 (346)
T ss_pred ceEEEEecccCcEEEEEEeccceeeEEEcCC--eEEEEecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEE
Confidence 3699999888899999999999999999986 3444456788888865 566666655433 22233333344444555
Q ss_pred Eec-CCCeEEEEeCCCcce--eeeccCCCCCeeEEEEcCCCCEEEEeeCCCcE-EEEeCCCCCeeee-eeccCCcccCCC
Q psy6442 140 CGG-EDLKMYKFDYSTGAE--IESFKGHFGPIHCVKFSPDGELYASGSEDGTL-RLWQTNVGKTYGL-WKCIEGGLNNSL 214 (231)
Q Consensus 140 ~g~-~d~~i~~~d~~~~~~--~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v-~iwd~~~~~~~~~-~~~~~~~~~~~~ 214 (231)
..+ ..|.|++-|+..... ....++|...|.+++++-+|.++||||..||+ ||||.++|...+. .++++.+-..-|
T Consensus 153 fPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~i 232 (346)
T KOG2111|consen 153 FPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCI 232 (346)
T ss_pred cCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEE
Confidence 544 458899999876543 46678999999999999999999999999995 9999999998765 578888877778
Q ss_pred CCCccccccc
Q psy6442 215 GLDSSGHLNN 224 (231)
Q Consensus 215 ~~~~~~~~~~ 224 (231)
+|+++..++-
T Consensus 233 aFSp~~s~La 242 (346)
T KOG2111|consen 233 AFSPNSSWLA 242 (346)
T ss_pred EeCCCccEEE
Confidence 8887665543
No 181
>KOG0321|consensus
Probab=99.41 E-value=1.7e-11 Score=103.96 Aligned_cols=195 Identities=18% Similarity=0.275 Sum_probs=127.2
Q ss_pred cCCCceeeeccCCCe------EeeeecccccEEEEEECCCCceeEecccccccc--------------------------
Q psy6442 3 VDGKPMLRQGDTGDW------IGTFEGHKGCVWGVDINKDASKAASGAADFQAK-------------------------- 50 (231)
Q Consensus 3 ~d~~~~~~~~~~g~~------i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~-------------------------- 50 (231)
.||.|.|++...-.+ +..+..|.+.|+.+.|.|...+|++++.|-+++
T Consensus 72 E~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~c 151 (720)
T KOG0321|consen 72 EDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSEC 151 (720)
T ss_pred CCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhh
Confidence 688999998754332 355678999999999999777888887764332
Q ss_pred ----CCCEEEEEeCCCCEEEEeCCCCCc--------------------e-------EE-EE----eCCcceeEEEccCCC
Q psy6442 51 ----NNTRLISCAEDKTVRLWDVSASAE--------------------V-------QK-LE----FGAVPNSLEISRDGT 94 (231)
Q Consensus 51 ----~~~~l~s~s~D~ti~iwd~~~~~~--------------------~-------~~-~~----~~~~~~~v~~~~~~~ 94 (231)
+...++||+.||.|.|||++-... . +. .. +...|+.+ +..|..
T Consensus 152 f~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv-~fkDe~ 230 (720)
T KOG0321|consen 152 FMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVV-LFKDES 230 (720)
T ss_pred hccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEE-EEeccc
Confidence 667899999999999999864320 0 00 00 01123333 444545
Q ss_pred EEE-EEc-CCeEEEEECCCcceE------Eeeeccc----eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc--ceeee
Q psy6442 95 TIT-VTH-GSCVTFLDANSLELI------KEHKVPA----QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG--AEIES 160 (231)
Q Consensus 95 ~~~-~~~-~~~i~~~d~~~~~~~------~~~~~~~----~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~--~~~~~ 160 (231)
.++ ++. |+.|++||++..... ...+.+. .....++..+..|..+.+...|.+|+.|++.+- .+...
T Consensus 231 tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~ 310 (720)
T KOG0321|consen 231 TLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAE 310 (720)
T ss_pred eeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhh
Confidence 444 343 789999998864432 2222221 122233434666666666666999999999653 23444
Q ss_pred ccCCCCC--eeEEEEcCCCCEEEEeeCCCcEEEEeCCCCC
Q psy6442 161 FKGHFGP--IHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 161 ~~~h~~~--V~~v~~spd~~~laS~s~d~~v~iwd~~~~~ 198 (231)
+.++... -..-..+||+.+++||+.|..+.||.+.+..
T Consensus 311 ~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e 350 (720)
T KOG0321|consen 311 FSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPE 350 (720)
T ss_pred ccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCcc
Confidence 5554321 1223589999999999999999999986554
No 182
>KOG1445|consensus
Probab=99.40 E-value=3e-12 Score=108.77 Aligned_cols=186 Identities=18% Similarity=0.219 Sum_probs=124.9
Q ss_pred CCcCCCceeeeccCCCe-------EeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCC
Q psy6442 1 MCVDGKPMLRQGDTGDW-------IGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASA 73 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~-------i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~ 73 (231)
+++||.|+||-...+.+ -..|++|..+|+++.|+|= ....|+++++|.||++||+...+
T Consensus 646 a~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPL--------------AadvLa~asyd~Ti~lWDl~~~~ 711 (1012)
T KOG1445|consen 646 ATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPL--------------AADVLAVASYDSTIELWDLANAK 711 (1012)
T ss_pred cccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecch--------------hhhHhhhhhccceeeeeehhhhh
Confidence 47899999999865533 3447899999999999983 24568999999999999999887
Q ss_pred ceEEE-EeCCcceeEEEccCCCEEE-EEcCCeEEEEECCCcce-EEeeeccceeEEEEEEecCCCCEEEEecCCC----e
Q psy6442 74 EVQKL-EFGAVPNSLEISRDGTTIT-VTHGSCVTFLDANSLEL-IKEHKVPAQVHSASLLLNSERPIFVCGGEDL----K 146 (231)
Q Consensus 74 ~~~~~-~~~~~~~~v~~~~~~~~~~-~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~----~ 146 (231)
....+ .+...+..++|+|+|+.++ ++.+++++++..+..+. +++-+.+..-....+.+-.++++++..+.|. .
T Consensus 712 ~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQ 791 (1012)
T KOG1445|consen 712 LYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQ 791 (1012)
T ss_pred hhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccchhh
Confidence 65554 4678999999999999775 57799999999776543 3333333333333344455677777665553 4
Q ss_pred EEEEeCCCc--ceeeeccCCCCC-eeEEEEcCC-CCEEEEeeCCCcEEEEeCCCCCee
Q psy6442 147 MYKFDYSTG--AEIESFKGHFGP-IHCVKFSPD-GELYASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 147 i~~~d~~~~--~~~~~~~~h~~~-V~~v~~spd-~~~laS~s~d~~v~iwd~~~~~~~ 200 (231)
|.+||-.+- ..+.+.--..++ +.-=.|.+| +-+|++|-.|..|..|.+--..++
T Consensus 792 v~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lfltGKGD~~v~~yEv~~esPy 849 (1012)
T KOG1445|consen 792 VQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLTGKGDRFVNMYEVIYESPY 849 (1012)
T ss_pred hhhhhhhhccCCcceeeeecccCccccccccCCCceEEEecCCCceEEEEEecCCCce
Confidence 556654321 122211000000 001124444 347899999999999998766665
No 183
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.40 E-value=1.6e-10 Score=98.97 Aligned_cols=199 Identities=13% Similarity=0.132 Sum_probs=127.3
Q ss_pred CCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcc
Q psy6442 5 GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVP 84 (231)
Q Consensus 5 ~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~ 84 (231)
.++++++. .|.....+..|.+.+.+..|+|||+.++..+. ...+..|.+||+.+++......+...+
T Consensus 182 ~~l~~~d~-dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~------------~~g~~~i~~~dl~~g~~~~l~~~~g~~ 248 (435)
T PRK05137 182 KRLAIMDQ-DGANVRYLTDGSSLVLTPRFSPNRQEITYMSY------------ANGRPRVYLLDLETGQRELVGNFPGMT 248 (435)
T ss_pred eEEEEECC-CCCCcEEEecCCCCeEeeEECCCCCEEEEEEe------------cCCCCEEEEEECCCCcEEEeecCCCcc
Confidence 36778885 46667778889999999999999776543210 112468999999888765444455566
Q ss_pred eeEEEccCCCEEEEE--cC--CeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecC-C--CeEEEEeCCCcce
Q psy6442 85 NSLEISRDGTTITVT--HG--SCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGE-D--LKMYKFDYSTGAE 157 (231)
Q Consensus 85 ~~v~~~~~~~~~~~~--~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-d--~~i~~~d~~~~~~ 157 (231)
...+|+||++.++.. .+ ..|.++|..+....+....+..... ..++|++..++..+. + ..|+++|...+..
T Consensus 249 ~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~~~~~~--~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~ 326 (435)
T PRK05137 249 FAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTTRLTDSPAIDTS--PSYSPDGSQIVFESDRSGSPQLYVMNADGSNP 326 (435)
T ss_pred cCcEECCCCCEEEEEEecCCCceEEEEECCCCceEEccCCCCccCc--eeEcCCCCEEEEEECCCCCCeEEEEECCCCCe
Confidence 788999999976543 23 3577778876654433222222222 334788887776553 2 4688899866543
Q ss_pred eeeccCCCCCeeEEEEcCCCCEEEEeeCC---CcEEEEeCCCCCeeeeeeccCCcccCCCCCCccccc
Q psy6442 158 IESFKGHFGPIHCVKFSPDGELYASGSED---GTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGHL 222 (231)
Q Consensus 158 ~~~~~~h~~~V~~v~~spd~~~laS~s~d---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (231)
..+..+...+....|||||+.|+..+.+ ..|.+||+..+.. .+++. +......+|.++|.+
T Consensus 327 -~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt~--~~~~~~p~~spDG~~ 390 (435)
T PRK05137 327 -RRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILTS--GFLVEGPTWAPNGRV 390 (435)
T ss_pred -EEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-EeccC--CCCCCCCeECCCCCE
Confidence 3333344556778899999998877643 3578889865543 33432 222345566666654
No 184
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.39 E-value=1.2e-10 Score=99.66 Aligned_cols=196 Identities=15% Similarity=0.138 Sum_probs=125.8
Q ss_pred CCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeC---CCCEEEEeCCCCCceEEEEeC
Q psy6442 5 GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAE---DKTVRLWDVSASAEVQKLEFG 81 (231)
Q Consensus 5 ~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~---D~ti~iwd~~~~~~~~~~~~~ 81 (231)
.++++||.. |...+.+..|...+.+..|+|+|+.++ ..+. +..|.+||+.+++......+.
T Consensus 184 ~~l~i~D~~-g~~~~~lt~~~~~v~~p~wSpDg~~la---------------~~s~~~~~~~l~~~dl~~g~~~~l~~~~ 247 (433)
T PRK04922 184 YALQVADSD-GYNPQTILRSAEPILSPAWSPDGKKLA---------------YVSFERGRSAIYVQDLATGQRELVASFR 247 (433)
T ss_pred EEEEEECCC-CCCceEeecCCCccccccCCCCCCEEE---------------EEecCCCCcEEEEEECCCCCEEEeccCC
Confidence 468888864 666666777888899999999876643 3332 346999999887764433344
Q ss_pred CcceeEEEccCCCEEEEE--cC--CeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecC-CC--eEEEEeCCC
Q psy6442 82 AVPNSLEISRDGTTITVT--HG--SCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGE-DL--KMYKFDYST 154 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~--~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-d~--~i~~~d~~~ 154 (231)
.......|+||++.+++. .+ ..|.++|..+.+..+......... ...++++++.++..+. ++ .|+.+++.+
T Consensus 248 g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~~~~~--~~~~spDG~~l~f~sd~~g~~~iy~~dl~~ 325 (433)
T PRK04922 248 GINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLTRLTNHFGIDT--EPTWAPDGKSIYFTSDRGGRPQIYRVAASG 325 (433)
T ss_pred CCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeEECccCCCCcc--ceEECCCCCEEEEEECCCCCceEEEEECCC
Confidence 455578999999977543 23 368889987765443322221112 2344888887776653 33 478888766
Q ss_pred cceeeeccCCCCCeeEEEEcCCCCEEEEeeCCC---cEEEEeCCCCCeeeeeeccCCcccCCCCCCccccc
Q psy6442 155 GAEIESFKGHFGPIHCVKFSPDGELYASGSEDG---TLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGHL 222 (231)
Q Consensus 155 ~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (231)
++.. .+..+.......+|||||++++..+.++ .|.+||+.+++... ++ .+......++.++|.+
T Consensus 326 g~~~-~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~~-Lt--~~~~~~~p~~spdG~~ 392 (433)
T PRK04922 326 GSAE-RLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVRT-LT--PGSLDESPSFAPNGSM 392 (433)
T ss_pred CCeE-EeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeEE-CC--CCCCCCCceECCCCCE
Confidence 5532 2222333455789999999888765443 58999998887653 22 2223344567777664
No 185
>KOG1963|consensus
Probab=99.38 E-value=1.9e-11 Score=106.88 Aligned_cols=186 Identities=19% Similarity=0.288 Sum_probs=124.8
Q ss_pred cCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCC
Q psy6442 3 VDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGA 82 (231)
Q Consensus 3 ~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~ 82 (231)
.+.+|.+++..||+++..|.+|..++..+.+.|.... -..+.+++.||+|++||...+..++++...-
T Consensus 35 ~~~~V~VyS~~Tg~~i~~l~~~~a~l~s~~~~~~~~~------------~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~ 102 (792)
T KOG1963|consen 35 TGNFVKVYSTATGECITSLEDHTAPLTSVIVLPSSEN------------ANYLIVCSLDGTIRVWDWSDGELLKTFDNNL 102 (792)
T ss_pred eCCEEEEEecchHhhhhhcccccCccceeeecCCCcc------------ceEEEEEecCccEEEecCCCcEEEEEEecCC
Confidence 4678999999999999999999999999988875321 1457899999999999998887766654332
Q ss_pred cceeEEE-----------------------------------------------------------ccCCCEEEEEcCCe
Q psy6442 83 VPNSLEI-----------------------------------------------------------SRDGTTITVTHGSC 103 (231)
Q Consensus 83 ~~~~v~~-----------------------------------------------------------~~~~~~~~~~~~~~ 103 (231)
.+..+.+ ++.+....+...-.
T Consensus 103 ~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~~i~~~~~ 182 (792)
T KOG1963|consen 103 PVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFKGIVHMCK 182 (792)
T ss_pred ceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEEEEEEeee
Confidence 2222211 11111111111122
Q ss_pred EEEEECCCcce-EEe--eeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCC--c--ceeeeccCCCCCeeEEEEcCC
Q psy6442 104 VTFLDANSLEL-IKE--HKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYST--G--AEIESFKGHFGPIHCVKFSPD 176 (231)
Q Consensus 104 i~~~d~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~--~--~~~~~~~~h~~~V~~v~~spd 176 (231)
+.+|....... ... .........-+...+|.++.+++|..||+|.+|.--. . .....+.-|.++|++++|+++
T Consensus 183 ~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~ 262 (792)
T KOG1963|consen 183 IHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSD 262 (792)
T ss_pred EEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecC
Confidence 22232222110 000 0001111123445689999999999999999995321 1 224567789999999999999
Q ss_pred CCEEEEeeCCCcEEEEeCCCCCee
Q psy6442 177 GELYASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 177 ~~~laS~s~d~~v~iwd~~~~~~~ 200 (231)
|.+|.||+..+.+-+|...+++..
T Consensus 263 G~~LlSGG~E~VLv~Wq~~T~~kq 286 (792)
T KOG1963|consen 263 GAYLLSGGREGVLVLWQLETGKKQ 286 (792)
T ss_pred CceEeecccceEEEEEeecCCCcc
Confidence 999999999999999999999844
No 186
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.38 E-value=2.5e-10 Score=97.60 Aligned_cols=195 Identities=17% Similarity=0.185 Sum_probs=120.5
Q ss_pred CCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeC---CCCEEEEeCCCCCceEEEEeC
Q psy6442 5 GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAE---DKTVRLWDVSASAEVQKLEFG 81 (231)
Q Consensus 5 ~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~---D~ti~iwd~~~~~~~~~~~~~ 81 (231)
.++.+++. +|+....+..|.+.+.+..|+|+|+.++ ..+. ...|.+||+.+++........
T Consensus 176 ~~L~~~D~-dG~~~~~l~~~~~~v~~p~wSPDG~~la---------------~~s~~~~~~~I~~~dl~~g~~~~l~~~~ 239 (427)
T PRK02889 176 YQLQISDA-DGQNAQSALSSPEPIISPAWSPDGTKLA---------------YVSFESKKPVVYVHDLATGRRRVVANFK 239 (427)
T ss_pred cEEEEECC-CCCCceEeccCCCCcccceEcCCCCEEE---------------EEEccCCCcEEEEEECCCCCEEEeecCC
Confidence 35666664 5777677777888999999999976543 3332 245999999988765443445
Q ss_pred CcceeEEEccCCCEEEEE--cCCe--EEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecC-CC--eEEEEeCCC
Q psy6442 82 AVPNSLEISRDGTTITVT--HGSC--VTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGE-DL--KMYKFDYST 154 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~--~~~~--i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-d~--~i~~~d~~~ 154 (231)
......+|+||+..++.. .++. +..+|.......+.......... ..++|+++.++..+. ++ .|+..+...
T Consensus 240 g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~--~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~ 317 (427)
T PRK02889 240 GSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSGLRRLTQSSGIDTE--PFFSPDGRSIYFTSDRGGAPQIYRMPASG 317 (427)
T ss_pred CCccceEECCCCCEEEEEEccCCCceEEEEECCCCCcEECCCCCCCCcC--eEEcCCCCEEEEEecCCCCcEEEEEECCC
Confidence 556788999999977643 3444 44455544432222111111222 234888887776543 33 455556555
Q ss_pred cceee-eccCCCCCeeEEEEcCCCCEEEEeeCCC---cEEEEeCCCCCeeeeeeccCCcccCCCCCCccccc
Q psy6442 155 GAEIE-SFKGHFGPIHCVKFSPDGELYASGSEDG---TLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGHL 222 (231)
Q Consensus 155 ~~~~~-~~~~h~~~V~~v~~spd~~~laS~s~d~---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (231)
+.... ++.+ ......+|||||++++..+.++ .|.+||+.+++...+ .. .......+|.++|++
T Consensus 318 g~~~~lt~~g--~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~l-t~--~~~~~~p~~spdg~~ 384 (427)
T PRK02889 318 GAAQRVTFTG--SYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTAL-TD--TTRDESPSFAPNGRY 384 (427)
T ss_pred CceEEEecCC--CCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEc-cC--CCCccCceECCCCCE
Confidence 44222 2222 2344678999999998877654 599999998876533 22 223355677777765
No 187
>KOG1523|consensus
Probab=99.37 E-value=3.7e-11 Score=94.55 Aligned_cols=168 Identities=20% Similarity=0.283 Sum_probs=124.7
Q ss_pred CeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCC-CCc---eEEEEeCCcceeEEEcc
Q psy6442 16 DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSA-SAE---VQKLEFGAVPNSLEISR 91 (231)
Q Consensus 16 ~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~-~~~---~~~~~~~~~~~~v~~~~ 91 (231)
+..++|+.|...|..++|+|.. .+|+||+.|+.-.+|...+ ++- +..+.+....++|.|+|
T Consensus 46 ~~~htls~Hd~~vtgvdWap~s---------------nrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP 110 (361)
T KOG1523|consen 46 EPAHTLSEHDKIVTGVDWAPKS---------------NRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSP 110 (361)
T ss_pred eeceehhhhCcceeEEeecCCC---------------CceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecC
Confidence 4689999999999999999974 4589999999999999843 322 33445678899999999
Q ss_pred CCCEEEEEcCC-eEEEE--ECCC-cceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeC-----C---------
Q psy6442 92 DGTTITVTHGS-CVTFL--DANS-LELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDY-----S--------- 153 (231)
Q Consensus 92 ~~~~~~~~~~~-~i~~~--d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~-----~--------- 153 (231)
..+.++++.+. .|.+| ...+ ..+-+.++-|......++.+++++-++++|+.|+.+++|.. +
T Consensus 111 ~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWg 190 (361)
T KOG1523|consen 111 KENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWG 190 (361)
T ss_pred cCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCc
Confidence 99998887654 44443 3222 22223344454444556667999999999999999888742 1
Q ss_pred ----CcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCC
Q psy6442 154 ----TGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 154 ----~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~ 198 (231)
-|+++.++....+-|+.+.|+|+|..|+=.+.|.++.+=|.....
T Consensus 191 sk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~ 239 (361)
T KOG1523|consen 191 SKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPS 239 (361)
T ss_pred cCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCc
Confidence 122334444455779999999999999999999999999987664
No 188
>KOG0644|consensus
Probab=99.37 E-value=3.8e-13 Score=117.03 Aligned_cols=183 Identities=20% Similarity=0.307 Sum_probs=133.8
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE- 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~- 79 (231)
+++|-.|++|+-.++++++++.||.+.|..++.+.. +..++++|.|.-|++|.+.++..+..+.
T Consensus 208 gsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~---------------n~~iaaaS~D~vIrvWrl~~~~pvsvLrg 272 (1113)
T KOG0644|consen 208 GSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSN---------------NTMIAAASNDKVIRVWRLPDGAPVSVLRG 272 (1113)
T ss_pred cCccceeeeeeccchhhhccCCCCccccchhccchh---------------hhhhhhcccCceEEEEecCCCchHHHHhc
Confidence 578889999999999999999999999998887653 6678999999999999999998877664
Q ss_pred eCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceE---Eeeeccc-------------------------eeEE-EEEE
Q psy6442 80 FGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELI---KEHKVPA-------------------------QVHS-ASLL 130 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~---~~~~~~~-------------------------~~~~-~~~~ 130 (231)
+...+++++|+|-. ..+.++++++||.+-...+ +..+... +... ....
T Consensus 273 htgavtaiafsP~~---sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~ 349 (1113)
T KOG0644|consen 273 HTGAVTAIAFSPRA---SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLA 349 (1113)
T ss_pred cccceeeeccCccc---cCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCCcccccchhhHhh
Confidence 56789999999854 3346789999987611100 0000000 0000 0000
Q ss_pred ecCCCCEEEEe-----------cCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCC-CCEEEEeeCCCcEEEEeCCCCC
Q psy6442 131 LNSERPIFVCG-----------GEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPD-GELYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 131 ~~~~~~~~~~g-----------~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd-~~~laS~s~d~~v~iwd~~~~~ 198 (231)
+......+++. -.+..+..|++.++.+++.+.+|..++..+.++|- .++..+++.||...|||+-.|-
T Consensus 350 ~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~ 429 (1113)
T KOG0644|consen 350 WRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGI 429 (1113)
T ss_pred hhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCC
Confidence 11112223333 33456778999999999999999999999999995 5677899999999999998887
Q ss_pred eee
Q psy6442 199 TYG 201 (231)
Q Consensus 199 ~~~ 201 (231)
+++
T Consensus 430 pik 432 (1113)
T KOG0644|consen 430 PIK 432 (1113)
T ss_pred cce
Confidence 654
No 189
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.35 E-value=5.7e-10 Score=92.59 Aligned_cols=181 Identities=29% Similarity=0.483 Sum_probs=134.0
Q ss_pred CcCCCceeeeccCCC-eEeeeecccc-cEEEEEE-CCCCceeEeccccccccCCCEEEEEeC-CCCEEEEeCCC-CCceE
Q psy6442 2 CVDGKPMLRQGDTGD-WIGTFEGHKG-CVWGVDI-NKDASKAASGAADFQAKNNTRLISCAE-DKTVRLWDVSA-SAEVQ 76 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~-~i~~l~gH~~-~V~~~~~-~~~~~~~~s~~~d~~~~~~~~l~s~s~-D~ti~iwd~~~-~~~~~ 76 (231)
+.|+.+.+|+...+. .+..+.++.. .+..+.+ ++++. ..++..+. |+++++||... .....
T Consensus 84 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~d~~~~~~~~~~~~~~~~ 149 (466)
T COG2319 84 SSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGN--------------SILLASSSLDGTVKLWDLSTPGKLIR 149 (466)
T ss_pred cCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcc--------------eEEeccCCCCccEEEEEecCCCeEEE
Confidence 358899999988776 7777887554 6666666 55432 13444444 99999999987 44444
Q ss_pred EEE-eCCcceeEEEccCCCEEEEEc--CCeEEEEECCCcceEEeeec-cceeEEEEEEecCCCC-EEEEecCCCeEEEEe
Q psy6442 77 KLE-FGAVPNSLEISRDGTTITVTH--GSCVTFLDANSLELIKEHKV-PAQVHSASLLLNSERP-IFVCGGEDLKMYKFD 151 (231)
Q Consensus 77 ~~~-~~~~~~~v~~~~~~~~~~~~~--~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~g~~d~~i~~~d 151 (231)
.+. +...+..+.++|++..++... ++.+.+|+......+..... ...+..+.+ .+++. .+++++.|+.+++||
T Consensus 150 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~d~~i~~wd 227 (466)
T COG2319 150 TLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAF--SPDGGLLIASGSSDGTIRLWD 227 (466)
T ss_pred EEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEE--cCCcceEEEEecCCCcEEEEE
Confidence 443 456778999999998666553 78999999987666555554 234554444 47776 555558999999999
Q ss_pred CCCcceee-eccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCe
Q psy6442 152 YSTGAEIE-SFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKT 199 (231)
Q Consensus 152 ~~~~~~~~-~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~ 199 (231)
...+..+. .+.+|...+ -..|+|++.++++++.|+.+++|+......
T Consensus 228 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 275 (466)
T COG2319 228 LSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS 275 (466)
T ss_pred CCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCc
Confidence 88777777 688898875 448999999999999999999999986664
No 190
>KOG1007|consensus
Probab=99.35 E-value=7.1e-11 Score=91.95 Aligned_cols=144 Identities=20% Similarity=0.327 Sum_probs=102.6
Q ss_pred cCCCEEEEEeCCCCEEEEeCCCCCceEEEE--eCCcceeEEEccCCCEEEEE--cCCeEEEEECCCcce-EEeeecc-ce
Q psy6442 50 KNNTRLISCAEDKTVRLWDVSASAEVQKLE--FGAVPNSLEISRDGTTITVT--HGSCVTFLDANSLEL-IKEHKVP-AQ 123 (231)
Q Consensus 50 ~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~--~~~~i~~~d~~~~~~-~~~~~~~-~~ 123 (231)
.++..+++.+ |+++..||+++.++...+. ++..+.++.+.|+.+.++++ .++.+++||.+..+. +.+...+ .-
T Consensus 182 Hdgnqv~tt~-d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHW 260 (370)
T KOG1007|consen 182 HDGNQVATTS-DSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHW 260 (370)
T ss_pred CccceEEEeC-CCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceE
Confidence 3566677765 8999999999888776664 56778999999998876664 468999999876543 3332222 22
Q ss_pred eEEEEEEecCC-CCEEEEecCCCeEEEEeCCCc-----------------------------ceeeeccCCCCCeeEEEE
Q psy6442 124 VHSASLLLNSE-RPIFVCGGEDLKMYKFDYSTG-----------------------------AEIESFKGHFGPIHCVKF 173 (231)
Q Consensus 124 ~~~~~~~~~~~-~~~~~~g~~d~~i~~~d~~~~-----------------------------~~~~~~~~h~~~V~~v~~ 173 (231)
+-++.+ +|. .+++++|+.|..+.++...+. ..+.++..|...|.+++|
T Consensus 261 vW~VRf--n~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aW 338 (370)
T KOG1007|consen 261 VWAVRF--NPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAW 338 (370)
T ss_pred EEEEEe--cCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEee
Confidence 333333 444 345778888888888743211 024467889999999999
Q ss_pred cC-CCCEEEEeeCCCcEEEEeCCC
Q psy6442 174 SP-DGELYASGSEDGTLRLWQTNV 196 (231)
Q Consensus 174 sp-d~~~laS~s~d~~v~iwd~~~ 196 (231)
|. |.-+|||-|.||.+.|=.+..
T Consensus 339 SsadPWiFASLSYDGRviIs~V~r 362 (370)
T KOG1007|consen 339 SSADPWIFASLSYDGRVIISSVPR 362 (370)
T ss_pred ccCCCeeEEEeccCceEEeecCCh
Confidence 98 566899999999998877643
No 191
>KOG1009|consensus
Probab=99.35 E-value=9.4e-12 Score=100.50 Aligned_cols=159 Identities=14% Similarity=0.193 Sum_probs=114.3
Q ss_pred CCcCCCceeeeccCC---------CeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCC
Q psy6442 1 MCVDGKPMLRQGDTG---------DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSA 71 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g---------~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~ 71 (231)
++.|.++|+|...++ +.+.+|..|+..|..+.|+|+|. .|+||+.+|.|.+|-...
T Consensus 32 ~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~ge---------------lLASg~D~g~v~lWk~~~ 96 (434)
T KOG1009|consen 32 AGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGE---------------LLASGGDGGEVFLWKQGD 96 (434)
T ss_pred ccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcC---------------eeeecCCCceEEEEEecC
Confidence 578999999988533 35788999999999999999855 478999999999997653
Q ss_pred CCceEEEEeCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeec-cceeEEEEEEecCCCCEEEEecCCCeEEEE
Q psy6442 72 SAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKV-PAQVHSASLLLNSERPIFVCGGEDLKMYKF 150 (231)
Q Consensus 72 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~ 150 (231)
-... .... .....+.. . ...+.... ...+..++ +.+++.++++++-|..+++|
T Consensus 97 ~~~~---~~d~---e~~~~ke~-w-----------------~v~k~lr~h~~diydL~--Ws~d~~~l~s~s~dns~~l~ 150 (434)
T KOG1009|consen 97 VRIF---DADT---EADLNKEK-W-----------------VVKKVLRGHRDDIYDLA--WSPDSNFLVSGSVDNSVRLW 150 (434)
T ss_pred cCCc---cccc---hhhhCccc-e-----------------EEEEEecccccchhhhh--ccCCCceeeeeeccceEEEE
Confidence 1100 0000 00000000 0 00011111 11222233 48899999999999999999
Q ss_pred eCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCee
Q psy6442 151 DYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 151 d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~ 200 (231)
|+..|..+..+..|...|..++|.|-++++++-+.|+..+++.+...+..
T Consensus 151 Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~ 200 (434)
T KOG1009|consen 151 DVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVI 200 (434)
T ss_pred EeccceeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeeeee
Confidence 99999999999999999999999999999999999998888877655543
No 192
>KOG0771|consensus
Probab=99.34 E-value=1.7e-11 Score=99.41 Aligned_cols=155 Identities=16% Similarity=0.249 Sum_probs=101.8
Q ss_pred CCCEEEEEeCCCCEEEEeCCCCCc-eEEEEeCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeec---cceeEE
Q psy6442 51 NNTRLISCAEDKTVRLWDVSASAE-VQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKV---PAQVHS 126 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~~~ 126 (231)
++..|++++.||++|||+..+... ....++...+.++.|+||++.++.......++|+..+...++.... +.....
T Consensus 155 ~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d~~~VW~~~~g~~~a~~t~~~k~~~~~~ 234 (398)
T KOG0771|consen 155 DGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGADSARVWSVNTGAALARKTPFSKDEMFSS 234 (398)
T ss_pred CCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCCceEEEEeccCchhhhcCCcccchhhhh
Confidence 568899999999999999655443 3344567899999999999987655444889999988866554331 111222
Q ss_pred EEEEecCCCC---EEEEecCCCeEEEEeCCC--c-c--eeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCC
Q psy6442 127 ASLLLNSERP---IFVCGGEDLKMYKFDYST--G-A--EIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 127 ~~~~~~~~~~---~~~~g~~d~~i~~~d~~~--~-~--~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~ 198 (231)
+.+...+.+. +++....-+.|..+++.. + . ...+...-...|.+++.|+||+++|-|+.||.|-|+++.+-+
T Consensus 235 cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq 314 (398)
T KOG0771|consen 235 CRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQ 314 (398)
T ss_pred ceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceee
Confidence 2332222212 222233334555555421 1 1 122222233479999999999999999999999999998887
Q ss_pred eeeeeec
Q psy6442 199 TYGLWKC 205 (231)
Q Consensus 199 ~~~~~~~ 205 (231)
..+..+.
T Consensus 315 ~~~~vk~ 321 (398)
T KOG0771|consen 315 RLQYVKE 321 (398)
T ss_pred eeEeehh
Confidence 7654443
No 193
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.33 E-value=2.4e-10 Score=97.82 Aligned_cols=176 Identities=16% Similarity=0.165 Sum_probs=110.2
Q ss_pred CCceeeeccCCC--eEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEE--eCCCCCceEEEEe
Q psy6442 5 GKPMLRQGDTGD--WIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLW--DVSASAEVQKLEF 80 (231)
Q Consensus 5 ~~~~~~~~~~g~--~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iw--d~~~~~~~~~~~~ 80 (231)
.++++|+..+|+ .+..+.+|.. ...|+|||+.++ ++.+.|+.+.|| |+.++........
T Consensus 228 ~~i~i~dl~tg~~~~l~~~~g~~~---~~~wSPDG~~La--------------~~~~~~g~~~Iy~~d~~~~~~~~lt~~ 290 (429)
T PRK01742 228 SQLVVHDLRSGARKVVASFRGHNG---APAFSPDGSRLA--------------FASSKDGVLNIYVMGANGGTPSQLTSG 290 (429)
T ss_pred cEEEEEeCCCCceEEEecCCCccC---ceeECCCCCEEE--------------EEEecCCcEEEEEEECCCCCeEeeccC
Confidence 468889988775 3555566543 578999865532 233467776665 6655554333233
Q ss_pred CCcceeEEEccCCCEEEEE-c-CCeEEEEECC--CcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcc
Q psy6442 81 GAVPNSLEISRDGTTITVT-H-GSCVTFLDAN--SLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA 156 (231)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~~-~-~~~i~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~ 156 (231)
...+....|+||++.++.. . ++...+|+.. .... ...... . . ...++|++..++..+.+ .+..||+.+++
T Consensus 291 ~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~-~~l~~~-~-~--~~~~SpDG~~ia~~~~~-~i~~~Dl~~g~ 364 (429)
T PRK01742 291 AGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGA-SLVGGR-G-Y--SAQISADGKTLVMINGD-NVVKQDLTSGS 364 (429)
T ss_pred CCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCe-EEecCC-C-C--CccCCCCCCEEEEEcCC-CEEEEECCCCC
Confidence 4456789999999976543 2 3556666543 2222 111111 1 1 23358899888877665 45669998876
Q ss_pred eeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeC--CCCCeeeeeec
Q psy6442 157 EIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQT--NVGKTYGLWKC 205 (231)
Q Consensus 157 ~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~--~~~~~~~~~~~ 205 (231)
.......+ ...+++|+|||++|+.++.++.+++|.+ .+|+....+..
T Consensus 365 ~~~lt~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~ 413 (429)
T PRK01742 365 TEVLSSTF--LDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPG 413 (429)
T ss_pred eEEecCCC--CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEccC
Confidence 44322222 2356789999999999999999998875 35666655553
No 194
>KOG1445|consensus
Probab=99.33 E-value=6.5e-12 Score=106.75 Aligned_cols=171 Identities=16% Similarity=0.236 Sum_probs=117.7
Q ss_pred CCCEEE--EEeCCCCEEEEeCCCCCce-----EEEEeCCcceeEEEccCC-CEEEE-EcCCeEEEEECCCcceEE-----
Q psy6442 51 NNTRLI--SCAEDKTVRLWDVSASAEV-----QKLEFGAVPNSLEISRDG-TTITV-THGSCVTFLDANSLELIK----- 116 (231)
Q Consensus 51 ~~~~l~--s~s~D~ti~iwd~~~~~~~-----~~~~~~~~~~~v~~~~~~-~~~~~-~~~~~i~~~d~~~~~~~~----- 116 (231)
++.+++ -+|..|.|-|+++.....+ ..+.-+..++++.|.|=+ ..+++ +.++.|++|.+......+
T Consensus 590 n~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tP 669 (1012)
T KOG1445|consen 590 NNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTP 669 (1012)
T ss_pred ccceEEEEecCCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCc
Confidence 445544 3456789999999765432 223345678899999843 34554 567899999865433221
Q ss_pred --eeecc-ceeEEEEEEecC-CCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEE
Q psy6442 117 --EHKVP-AQVHSASLLLNS-ERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLW 192 (231)
Q Consensus 117 --~~~~~-~~~~~~~~~~~~-~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iw 192 (231)
..+.+ .++..+.+ +| ...++++++.|.+|++||+.++.+...+.+|++.|.+++|||+|+++|+.+.||+|++|
T Consensus 670 e~~lt~h~eKI~slRf--HPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy 747 (1012)
T KOG1445|consen 670 EKILTIHGEKITSLRF--HPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVY 747 (1012)
T ss_pred ceeeecccceEEEEEe--cchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEe
Confidence 12222 23444444 43 24467889999999999999999889999999999999999999999999999999999
Q ss_pred eCCCCCe-eeeeeccCCcccCCCCCCcccccc
Q psy6442 193 QTNVGKT-YGLWKCIEGGLNNSLGLDSSGHLN 223 (231)
Q Consensus 193 d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 223 (231)
+.+++.. +..=++..+.-.+-|.|.-+||..
T Consensus 748 ~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~v 779 (1012)
T KOG1445|consen 748 EPRSREQPVYEGKGPVGTRGARILWACDGRIV 779 (1012)
T ss_pred CCCCCCCccccCCCCccCcceeEEEEecCcEE
Confidence 9877653 333333333444455555555543
No 195
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.33 E-value=3.7e-10 Score=93.30 Aligned_cols=141 Identities=13% Similarity=0.252 Sum_probs=90.3
Q ss_pred EEEEeCCCCEEEEeCCCCCceE-------EEEeCCcceeEEEccCCCEEEEEc--CCeEEEEECCC--cc--eEEeeec-
Q psy6442 55 LISCAEDKTVRLWDVSASAEVQ-------KLEFGAVPNSLEISRDGTTITVTH--GSCVTFLDANS--LE--LIKEHKV- 120 (231)
Q Consensus 55 l~s~s~D~ti~iwd~~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~~--~~~i~~~d~~~--~~--~~~~~~~- 120 (231)
+++...+++|.+||+.....+. .+..+..+..+.++|+++.+++.. ++.+.+|+... .. .+.....
T Consensus 141 ~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~ 220 (330)
T PRK11028 141 WVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMM 220 (330)
T ss_pred EEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecC
Confidence 3556667999999997633221 122345678999999999988764 57999998763 22 2222211
Q ss_pred c----ceeEEEEEEecCCCCEEEEecC-CCeEEEEeCCCcceeeeccCCC---CCeeEEEEcCCCCEEEEeeC-CCcEEE
Q psy6442 121 P----AQVHSASLLLNSERPIFVCGGE-DLKMYKFDYSTGAEIESFKGHF---GPIHCVKFSPDGELYASGSE-DGTLRL 191 (231)
Q Consensus 121 ~----~~~~~~~~~~~~~~~~~~~g~~-d~~i~~~d~~~~~~~~~~~~h~---~~V~~v~~spd~~~laS~s~-d~~v~i 191 (231)
+ .+.....+.++|++++++++.. +..|.+|++.......++.+|. ...+.++++|||++|+++.. +++|.|
T Consensus 221 p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v 300 (330)
T PRK11028 221 PADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISV 300 (330)
T ss_pred CCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEE
Confidence 1 1111223445889998887754 6789899885432111222221 24568999999998877664 999999
Q ss_pred EeCC
Q psy6442 192 WQTN 195 (231)
Q Consensus 192 wd~~ 195 (231)
|++.
T Consensus 301 ~~~~ 304 (330)
T PRK11028 301 YEID 304 (330)
T ss_pred EEEc
Confidence 9864
No 196
>KOG1310|consensus
Probab=99.31 E-value=1.1e-11 Score=103.86 Aligned_cols=124 Identities=23% Similarity=0.388 Sum_probs=94.1
Q ss_pred EeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe--CCcceeEEEccCCCE
Q psy6442 18 IGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF--GAVPNSLEISRDGTT 95 (231)
Q Consensus 18 i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~ 95 (231)
-+.|.||+|+|.+++|+.+|. .|+|||.|-.+.|||....+.+..+.. ...++++
T Consensus 43 E~eL~GH~GCVN~LeWn~dG~---------------lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsv-------- 99 (758)
T KOG1310|consen 43 EAELTGHTGCVNCLEWNADGE---------------LLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSV-------- 99 (758)
T ss_pred hhhhccccceecceeecCCCC---------------EEeecCCcceEEeecchhcceeeeeecccccceeEE--------
Confidence 345789999999999998754 588999999999999987666555432 2233333
Q ss_pred EEEEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc----------ceeeeccCCC
Q psy6442 96 ITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG----------AEIESFKGHF 165 (231)
Q Consensus 96 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~----------~~~~~~~~h~ 165 (231)
.+.+....+++++|..|..|++||+.+. +.++.+..|.
T Consensus 100 --------------------------------KFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht 147 (758)
T KOG1310|consen 100 --------------------------------KFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHT 147 (758)
T ss_pred --------------------------------eeeccCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhh
Confidence 3334455667788888888888888641 1234456789
Q ss_pred CCeeEEEEcCCC-CEEEEeeCCCcEEEEeCCC
Q psy6442 166 GPIHCVKFSPDG-ELYASGSEDGTLRLWQTNV 196 (231)
Q Consensus 166 ~~V~~v~~spd~-~~laS~s~d~~v~iwd~~~ 196 (231)
..|-.++-.|++ +.+-||++||+||=+|++.
T Consensus 148 ~rVKria~~p~~PhtfwsasEDGtirQyDiRE 179 (758)
T KOG1310|consen 148 DRVKRIATAPNGPHTFWSASEDGTIRQYDIRE 179 (758)
T ss_pred hhhhheecCCCCCceEEEecCCcceeeecccC
Confidence 999999999987 8999999999999999976
No 197
>KOG1240|consensus
Probab=99.30 E-value=1.5e-10 Score=104.76 Aligned_cols=181 Identities=14% Similarity=0.265 Sum_probs=126.4
Q ss_pred eeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCC-------CceEEEE-eC
Q psy6442 10 RQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSAS-------AEVQKLE-FG 81 (231)
Q Consensus 10 ~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~-------~~~~~~~-~~ 81 (231)
|. -+|.+++.|..|+..|..++.+++. ...++|||.||+||+|+.+.- ++..+.. .+
T Consensus 1034 W~-p~G~lVAhL~Ehs~~v~k~a~s~~~--------------~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~ 1098 (1431)
T KOG1240|consen 1034 WN-PRGILVAHLHEHSSAVIKLAVSSEH--------------TSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEG 1098 (1431)
T ss_pred CC-ccceEeehhhhccccccceeecCCC--------------CceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccC
Confidence 55 3589999999999999888877652 356899999999999998642 1222222 35
Q ss_pred CcceeEEEccCCCEEEEE-cCCeEEEEECCCcce-------EEeeeccceeEEEEE---EecCCCCEEEEecCCCeEEEE
Q psy6442 82 AVPNSLEISRDGTTITVT-HGSCVTFLDANSLEL-------IKEHKVPAQVHSASL---LLNSERPIFVCGGEDLKMYKF 150 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~-------~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~d~~i~~~ 150 (231)
..+..+...+.+..++++ .||.|++.++.-... .+..+.........+ ........++.+..-+.|..|
T Consensus 1099 sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~ 1178 (1431)
T KOG1240|consen 1099 SRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSW 1178 (1431)
T ss_pred CceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEe
Confidence 677888888888877665 578888877654211 111111111101111 111122366777777889999
Q ss_pred eCCCcceeeecc--CCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeec
Q psy6442 151 DYSTGAEIESFK--GHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKC 205 (231)
Q Consensus 151 d~~~~~~~~~~~--~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~ 205 (231)
|++....+.+++ -..+.|++++.+|-+..+++|..-|.+.+||++-+.++..|+-
T Consensus 1179 D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~ 1235 (1431)
T KOG1240|consen 1179 DTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEH 1235 (1431)
T ss_pred cchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccC
Confidence 998766555443 2347899999999999999999999999999999999988863
No 198
>KOG3881|consensus
Probab=99.30 E-value=2.4e-10 Score=92.13 Aligned_cols=162 Identities=16% Similarity=0.233 Sum_probs=117.6
Q ss_pred CCCEEEEEeCC--CCEEEEeCCCCCceEEEE----------eCCcceeEEEccC--CCEE-EEEcCCeEEEEECCCcc-e
Q psy6442 51 NNTRLISCAED--KTVRLWDVSASAEVQKLE----------FGAVPNSLEISRD--GTTI-TVTHGSCVTFLDANSLE-L 114 (231)
Q Consensus 51 ~~~~l~s~s~D--~ti~iwd~~~~~~~~~~~----------~~~~~~~v~~~~~--~~~~-~~~~~~~i~~~d~~~~~-~ 114 (231)
....+++||.- ..++|||+...+.+..-. .+-.+.++.|-+. ...+ .++....+++||.+.+. +
T Consensus 160 ~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRP 239 (412)
T KOG3881|consen 160 DPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRP 239 (412)
T ss_pred CCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcc
Confidence 45667889988 889999998664332211 1223556677665 4444 45567899999988644 3
Q ss_pred EEeeecc-ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeee-ccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEE
Q psy6442 115 IKEHKVP-AQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIES-FKGHFGPIHCVKFSPDGELYASGSEDGTLRLW 192 (231)
Q Consensus 115 ~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~-~~~h~~~V~~v~~spd~~~laS~s~d~~v~iw 192 (231)
+..+... .++.+... .|.+.++++|...+.+..||++.+..+.. +.+-++.|+++..+|.+++||||+-|+.|||+
T Consensus 240 V~~fd~~E~~is~~~l--~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIh 317 (412)
T KOG3881|consen 240 VAQFDFLENPISSTGL--TPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIH 317 (412)
T ss_pred eeEeccccCcceeeee--cCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEe
Confidence 4455443 34444444 78899999999999999999999988866 88999999999999999999999999999999
Q ss_pred eCCCCCeeeeeeccCCcccCCCCC
Q psy6442 193 QTNVGKTYGLWKCIEGGLNNSLGL 216 (231)
Q Consensus 193 d~~~~~~~~~~~~~~~~~~~~~~~ 216 (231)
|+++.+.. .+.|-..-.|.|.+
T Consensus 318 D~ktrkll--~kvYvKs~lt~il~ 339 (412)
T KOG3881|consen 318 DIKTRKLL--HKVYVKSRLTFILL 339 (412)
T ss_pred ecccchhh--hhhhhhccccEEEe
Confidence 99996532 23444444444444
No 199
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.29 E-value=1.5e-09 Score=92.43 Aligned_cols=179 Identities=15% Similarity=0.172 Sum_probs=116.7
Q ss_pred CceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcce
Q psy6442 6 KPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPN 85 (231)
Q Consensus 6 ~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~ 85 (231)
.+++++.+ |.....+..+.+.+.+..|+|+|++++.... .+...+|++||+.+++......+.....
T Consensus 171 ~l~~~d~~-g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~------------~~~~~~i~v~d~~~g~~~~~~~~~~~~~ 237 (417)
T TIGR02800 171 ELQVADYD-GANPQTITRSREPILSPAWSPDGQKLAYVSF------------ESGKPEIYVQDLATGQREKVASFPGMNG 237 (417)
T ss_pred eEEEEcCC-CCCCEEeecCCCceecccCCCCCCEEEEEEc------------CCCCcEEEEEECCCCCEEEeecCCCCcc
Confidence 46677754 5556667777778999999998776542210 1112479999998876554444555567
Q ss_pred eEEEccCCCEEEEEc--C--CeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCC---CeEEEEeCCCccee
Q psy6442 86 SLEISRDGTTITVTH--G--SCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGED---LKMYKFDYSTGAEI 158 (231)
Q Consensus 86 ~v~~~~~~~~~~~~~--~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d---~~i~~~d~~~~~~~ 158 (231)
..+|+||++.+++.. + ..+.+++..+............... ..++++++.++..+.. ..|+++|+.+++.
T Consensus 238 ~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~--~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~- 314 (417)
T TIGR02800 238 APAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRLTNGPGIDTE--PSWSPDGKSIAFTSDRGGSPQIYMMDADGGEV- 314 (417)
T ss_pred ceEECCCCCEEEEEECCCCCccEEEEECCCCCEEECCCCCCCCCC--EEECCCCCEEEEEECCCCCceEEEEECCCCCE-
Confidence 789999998776532 2 3578888776544333222211112 2336788877655432 3688888876653
Q ss_pred eeccCCCCCeeEEEEcCCCCEEEEeeCCC---cEEEEeCCCCCee
Q psy6442 159 ESFKGHFGPIHCVKFSPDGELYASGSEDG---TLRLWQTNVGKTY 200 (231)
Q Consensus 159 ~~~~~h~~~V~~v~~spd~~~laS~s~d~---~v~iwd~~~~~~~ 200 (231)
..+..+...+....|+|++.+++.++.++ .|.+||+.++...
T Consensus 315 ~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~ 359 (417)
T TIGR02800 315 RRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGER 359 (417)
T ss_pred EEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeE
Confidence 33433455677889999999998888776 7889998886543
No 200
>KOG0642|consensus
Probab=99.28 E-value=2.6e-11 Score=101.53 Aligned_cols=149 Identities=23% Similarity=0.387 Sum_probs=102.6
Q ss_pred eeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEE
Q psy6442 20 TFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT 99 (231)
Q Consensus 20 ~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 99 (231)
++..|.+.|..+.|.+. ...|++|+.|+++++|.++.... ...
T Consensus 289 tl~s~~d~ir~l~~~~s---------------ep~lit~sed~~lk~WnLqk~~~-----------------s~~----- 331 (577)
T KOG0642|consen 289 TLRSHDDCIRALAFHPS---------------EPVLITASEDGTLKLWNLQKAKK-----------------SAE----- 331 (577)
T ss_pred eeecchhhhhhhhcCCC---------------CCeEEEeccccchhhhhhcccCC-----------------ccc-----
Confidence 56678888888877764 34589999999999999843110 000
Q ss_pred cCCeEEEEECCCcceEEeeec-cceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc----------ceeeeccCCCCCe
Q psy6442 100 HGSCVTFLDANSLELIKEHKV-PAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG----------AEIESFKGHFGPI 168 (231)
Q Consensus 100 ~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~----------~~~~~~~~h~~~V 168 (231)
...+++.+++. ..++.+.++ ...+..+.+|+-|++|+.|++... .+..++.||++.|
T Consensus 332 ----------~~~epi~tfraH~gPVl~v~v--~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdav 399 (577)
T KOG0642|consen 332 ----------KDVEPILTFRAHEGPVLCVVV--PSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAV 399 (577)
T ss_pred ----------cceeeeEEEecccCceEEEEe--cCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccce
Confidence 00122222322 234544444 777888999999999999955321 2346788999999
Q ss_pred eEEEEcCCCCEEEEeeCCCcEEEEeCCCCCe--eeeeeccCCcccCCCCCCcc
Q psy6442 169 HCVKFSPDGELYASGSEDGTLRLWQTNVGKT--YGLWKCIEGGLNNSLGLDSS 219 (231)
Q Consensus 169 ~~v~~spd~~~laS~s~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~ 219 (231)
+.+++|+....|++|+.||++|+|+.....+ +..-+ ..+++.++.+..+
T Consensus 400 w~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~~f~~~~--e~g~Plsvd~~ss 450 (577)
T KOG0642|consen 400 WLLALSSTKDRLLSCSSDGTVRLWEPTEESPCTFGEPK--EHGYPLSVDRTSS 450 (577)
T ss_pred eeeeecccccceeeecCCceEEeeccCCcCccccCCcc--ccCCcceEeeccc
Confidence 9999999999999999999999999988776 33223 2455555555543
No 201
>KOG0322|consensus
Probab=99.27 E-value=7.7e-11 Score=90.67 Aligned_cols=184 Identities=17% Similarity=0.203 Sum_probs=115.0
Q ss_pred eeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-e-CCcceeEEEccCCCEE
Q psy6442 19 GTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE-F-GAVPNSLEISRDGTTI 96 (231)
Q Consensus 19 ~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~-~~~~~~v~~~~~~~~~ 96 (231)
-.|++|.+.|+++.|..+ .+|.++..-|.|++|++++.+....+. + ...+..+..-|++...
T Consensus 8 fvLRp~~~~v~s~~fqa~----------------~rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~d~l~ 71 (323)
T KOG0322|consen 8 FVLRPHSSSVTSVLFQAN----------------ERLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPNDSLD 71 (323)
T ss_pred eEeccccchheehhhccc----------------hhhhcccccceEEEEEeecCccchhhhhhccceeeceeecCCcchh
Confidence 457799999999988764 457888888999999998877665555 2 3345666666654444
Q ss_pred EEEcCCeEEEEECCCcceEEee--------------------------------------eccce--e------------
Q psy6442 97 TVTHGSCVTFLDANSLELIKEH--------------------------------------KVPAQ--V------------ 124 (231)
Q Consensus 97 ~~~~~~~i~~~d~~~~~~~~~~--------------------------------------~~~~~--~------------ 124 (231)
.-..+..+.+|++.....+..+ +.+.+ +
T Consensus 72 tqgRd~~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klg 151 (323)
T KOG0322|consen 72 TQGRDPLLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLG 151 (323)
T ss_pred hcCCCceEEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccC
Confidence 3334444555543321111000 00000 0
Q ss_pred EEEEEE--e-cCCCCEEEEecCCCeEEEEeCCCcc----------eeeeccCCCCCe-----------------------
Q psy6442 125 HSASLL--L-NSERPIFVCGGEDLKMYKFDYSTGA----------EIESFKGHFGPI----------------------- 168 (231)
Q Consensus 125 ~~~~~~--~-~~~~~~~~~g~~d~~i~~~d~~~~~----------~~~~~~~h~~~V----------------------- 168 (231)
...+.. . .....+++.|.+++.+.+||+.++. .......|..+|
T Consensus 152 svmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~ 231 (323)
T KOG0322|consen 152 SVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVM 231 (323)
T ss_pred ceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCcccccee
Confidence 001111 0 1122356788899999999998752 111122343333
Q ss_pred -----------------------eEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCcc
Q psy6442 169 -----------------------HCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSS 219 (231)
Q Consensus 169 -----------------------~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (231)
..+.+-||+.++||++.|+.||||+-++.++.+.++-+- +-+|.++|.++
T Consensus 232 ~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHs-agvn~vAfspd 304 (323)
T KOG0322|consen 232 YSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHS-AGVNAVAFSPD 304 (323)
T ss_pred eeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhh-cceeEEEeCCC
Confidence 346677889999999999999999999999998887655 44677777765
No 202
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.26 E-value=4.1e-09 Score=90.20 Aligned_cols=178 Identities=15% Similarity=0.121 Sum_probs=105.5
Q ss_pred CCceeeeccCCCe--EeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCC--CEEEEeCCCCCceEEEEe
Q psy6442 5 GKPMLRQGDTGDW--IGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDK--TVRLWDVSASAEVQKLEF 80 (231)
Q Consensus 5 ~~~~~~~~~~g~~--i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~--ti~iwd~~~~~~~~~~~~ 80 (231)
.++++++..+|+. +..+++| +....|+|||+.++ ++.+.++ .|.+||+.+++..+....
T Consensus 223 ~~i~i~dl~~G~~~~l~~~~~~---~~~~~~SPDG~~La--------------~~~~~~g~~~I~~~d~~tg~~~~lt~~ 285 (429)
T PRK03629 223 SALVIQTLANGAVRQVASFPRH---NGAPAFSPDGSKLA--------------FALSKTGSLNLYVMDLASGQIRQVTDG 285 (429)
T ss_pred cEEEEEECCCCCeEEccCCCCC---cCCeEECCCCCEEE--------------EEEcCCCCcEEEEEECCCCCEEEccCC
Confidence 4567777776643 3334444 34568888876543 2333344 488899988766544333
Q ss_pred CCcceeEEEccCCCEEEE-EcC-C--eEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCC---CeEEEEeCC
Q psy6442 81 GAVPNSLEISRDGTTITV-THG-S--CVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGED---LKMYKFDYS 153 (231)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~-~~~-~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d---~~i~~~d~~ 153 (231)
...+....|+||++.++. +.. + .+..++.......+......... ...++|++..++..+.+ ..|++||+.
T Consensus 286 ~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~~~~~~--~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~ 363 (429)
T PRK03629 286 RSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWEGSQNQ--DADVSSDGKFMVMVSSNGGQQHIAKQDLA 363 (429)
T ss_pred CCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecCCCCcc--CEEECCCCCEEEEEEccCCCceEEEEECC
Confidence 445678899999997654 332 2 44555665543322211111122 23348888887765432 468899988
Q ss_pred CcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCc---EEEEeCCCCCeeeeee
Q psy6442 154 TGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGT---LRLWQTNVGKTYGLWK 204 (231)
Q Consensus 154 ~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~---v~iwd~~~~~~~~~~~ 204 (231)
++... .+... .......|+|||++|+.++.++. +.++++. |+....+.
T Consensus 364 ~g~~~-~Lt~~-~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~-G~~~~~l~ 414 (429)
T PRK03629 364 TGGVQ-VLTDT-FLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLP 414 (429)
T ss_pred CCCeE-EeCCC-CCCCCceECCCCCEEEEEEcCCCceEEEEEECC-CCCeEECc
Confidence 77533 33211 12346789999999999988775 5677774 44333333
No 203
>KOG1273|consensus
Probab=99.26 E-value=6.1e-10 Score=87.79 Aligned_cols=161 Identities=14% Similarity=0.137 Sum_probs=114.8
Q ss_pred EEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCCEEEE-EcCCeEE
Q psy6442 28 VWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITV-THGSCVT 105 (231)
Q Consensus 28 V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~-~~~~~i~ 105 (231)
-.++.|++- |..||.|..||.|-|||+.+....+.+. +-.++.+++|+++|+.++. +.+..+.
T Consensus 26 a~~~~Fs~~---------------G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~ 90 (405)
T KOG1273|consen 26 AECCQFSRW---------------GDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIK 90 (405)
T ss_pred cceEEeccC---------------cceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeE
Confidence 567888876 4568999999999999999887655553 3467899999999998776 4578999
Q ss_pred EEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcc--eeee-ccCCC-CCeeEEEEcCCCCEEE
Q psy6442 106 FLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA--EIES-FKGHF-GPIHCVKFSPDGELYA 181 (231)
Q Consensus 106 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~--~~~~-~~~h~-~~V~~v~~spd~~~la 181 (231)
+||+..+.++++++.+.++..+.+.+.....++++--... -.+.++..+. .+.. -.+.. ..-.+..|.+.|.++.
T Consensus 91 lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va~~~~~s-p~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIi 169 (405)
T KOG1273|consen 91 LWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVATIMEES-PVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYII 169 (405)
T ss_pred EEeccCCCceeEEEccCccceeeeccccCCeEEEEEecCC-cEEEEecCCceeeccCCCccccccccccccccCCCCEEE
Confidence 9999999999999998888877775555555555543332 2222332211 1110 01111 1112345889999999
Q ss_pred EeeCCCcEEEEeCCCCCeeeeee
Q psy6442 182 SGSEDGTLRLWQTNVGKTYGLWK 204 (231)
Q Consensus 182 S~s~d~~v~iwd~~~~~~~~~~~ 204 (231)
+|...|-+-++|..+.+.++.++
T Consensus 170 tGtsKGkllv~~a~t~e~vas~r 192 (405)
T KOG1273|consen 170 TGTSKGKLLVYDAETLECVASFR 192 (405)
T ss_pred EecCcceEEEEecchheeeeeee
Confidence 99999999999999887766554
No 204
>KOG1009|consensus
Probab=99.24 E-value=1.5e-10 Score=93.75 Aligned_cols=124 Identities=25% Similarity=0.478 Sum_probs=85.2
Q ss_pred ccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceE---EEE-------eCCcceeEEEccCCCE
Q psy6442 26 GCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQ---KLE-------FGAVPNSLEISRDGTT 95 (231)
Q Consensus 26 ~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~---~~~-------~~~~~~~v~~~~~~~~ 95 (231)
.+|.+++|.+.. ..+|+||+.|..||||-+.....-. ++. +...++.+.|
T Consensus 14 ~pv~s~dfq~n~--------------~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf------ 73 (434)
T KOG1009|consen 14 EPVYSVDFQKNS--------------LNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRF------ 73 (434)
T ss_pred CceEEEEeccCc--------------ccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEE------
Confidence 578889888753 2379999999999999875432211 110 1223333333
Q ss_pred EEEEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCC--------C--------cceee
Q psy6442 96 ITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYS--------T--------GAEIE 159 (231)
Q Consensus 96 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~--------~--------~~~~~ 159 (231)
+|++.++++|++++.+.+|-.. + -....
T Consensus 74 ------------------------------------~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k 117 (434)
T KOG1009|consen 74 ------------------------------------SPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKK 117 (434)
T ss_pred ------------------------------------cCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEE
Confidence 5555556666666666655433 1 01134
Q ss_pred eccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeec
Q psy6442 160 SFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKC 205 (231)
Q Consensus 160 ~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~ 205 (231)
.+.+|...|..++|+|+++++++++.|+++++||+..|+..+...+
T Consensus 118 ~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~d 163 (434)
T KOG1009|consen 118 VLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDD 163 (434)
T ss_pred EecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccc
Confidence 5678999999999999999999999999999999999998765543
No 205
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.22 E-value=3.9e-09 Score=90.53 Aligned_cols=178 Identities=11% Similarity=0.092 Sum_probs=111.9
Q ss_pred CCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCC--EEEEeCCCCCceEEEEeC
Q psy6442 4 DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKT--VRLWDVSASAEVQKLEFG 81 (231)
Q Consensus 4 d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~t--i~iwd~~~~~~~~~~~~~ 81 (231)
+.++++|+..+|+.. .+..+.+.+....|+|+|+.+ +++.+.++. |.+||+.++...+.....
T Consensus 225 ~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~l--------------a~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~ 289 (435)
T PRK05137 225 RPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRKV--------------VMSLSQGGNTDIYTMDLRSGTTTRLTDSP 289 (435)
T ss_pred CCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCEE--------------EEEEecCCCceEEEEECCCCceEEccCCC
Confidence 467888998877653 356677778888999987654 345555665 666688877654433333
Q ss_pred CcceeEEEccCCCEEEEEcC----CeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCC---CeEEEEeCCC
Q psy6442 82 AVPNSLEISRDGTTITVTHG----SCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGED---LKMYKFDYST 154 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d---~~i~~~d~~~ 154 (231)
.......|+||++.++...+ ..+.++|.......+.......... ..++|++..++....+ ..|+++|...
T Consensus 290 ~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~~~~~~~~--~~~SpdG~~ia~~~~~~~~~~i~~~d~~~ 367 (435)
T PRK05137 290 AIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISFGGGRYST--PVWSPRGDLIAFTKQGGGQFSIGVMKPDG 367 (435)
T ss_pred CccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeecCCCcccC--eEECCCCCEEEEEEcCCCceEEEEEECCC
Confidence 44567899999997665432 2677788765544332222222222 2348888887765432 4688899755
Q ss_pred cceeeeccCCCCCeeEEEEcCCCCEEEEeeCC------CcEEEEeCCCCCee
Q psy6442 155 GAEIESFKGHFGPIHCVKFSPDGELYASGSED------GTLRLWQTNVGKTY 200 (231)
Q Consensus 155 ~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d------~~v~iwd~~~~~~~ 200 (231)
+.. ..+. +...+.+..|+|||++|+..+.+ ..+.+.++..++..
T Consensus 368 ~~~-~~lt-~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~~ 417 (435)
T PRK05137 368 SGE-RILT-SGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNER 417 (435)
T ss_pred Cce-Eecc-CCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCceE
Confidence 442 3332 22346778999999987765542 25777788666554
No 206
>KOG2321|consensus
Probab=99.20 E-value=4.8e-10 Score=94.52 Aligned_cols=175 Identities=17% Similarity=0.261 Sum_probs=134.6
Q ss_pred cCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCC
Q psy6442 3 VDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGA 82 (231)
Q Consensus 3 ~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~ 82 (231)
.-..|+-.++..|++|..|+-..+.++++..++. .+.|+.|..||.|.+||.++...+.++....
T Consensus 153 sg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~---------------hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~ 217 (703)
T KOG2321|consen 153 SGSEVYRLNLEQGRFLNPFETDSGELNVVSINEE---------------HGLLACGTEDGVVEFWDPRDKSRVGTLDAAS 217 (703)
T ss_pred cCcceEEEEccccccccccccccccceeeeecCc---------------cceEEecccCceEEEecchhhhhheeeeccc
Confidence 3456788889999999999988899999999985 4457777889999999999988877776543
Q ss_pred ------------cceeEEEccCCCEEEEEc-CCeEEEEECCCcceEEe--eeccceeEEEEEEecCCCCEEEEecCCCeE
Q psy6442 83 ------------VPNSLEISRDGTTITVTH-GSCVTFLDANSLELIKE--HKVPAQVHSASLLLNSERPIFVCGGEDLKM 147 (231)
Q Consensus 83 ------------~~~~v~~~~~~~~~~~~~-~~~i~~~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i 147 (231)
.|+++.|+.+|..+.++. .+.+.++|++...++.. +....++..+.+.....+..+++ .+...+
T Consensus 218 ~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S-~Dk~~~ 296 (703)
T KOG2321|consen 218 SVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVS-MDKRIL 296 (703)
T ss_pred ccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEe-cchHHh
Confidence 388999999999888764 68999999998777654 44445555555543323334444 445678
Q ss_pred EEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 148 YKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 148 ~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
++||..+|+....++ .+..++.+++-|++-++.+|-++.-+..|=+
T Consensus 297 kiWd~~~Gk~~asiE-pt~~lND~C~~p~sGm~f~Ane~~~m~~yyi 342 (703)
T KOG2321|consen 297 KIWDECTGKPMASIE-PTSDLNDFCFVPGSGMFFTANESSKMHTYYI 342 (703)
T ss_pred hhcccccCCceeecc-ccCCcCceeeecCCceEEEecCCCcceeEEc
Confidence 899999998877766 4456999999999999999988888765543
No 207
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.20 E-value=1.1e-08 Score=87.67 Aligned_cols=196 Identities=13% Similarity=0.116 Sum_probs=120.0
Q ss_pred CceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCC---CCEEEEeCCCCCceEEEEeCC
Q psy6442 6 KPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAED---KTVRLWDVSASAEVQKLEFGA 82 (231)
Q Consensus 6 ~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D---~ti~iwd~~~~~~~~~~~~~~ 82 (231)
.+.+++.+ |.....+..|...+....|+|+|+.++ ..+.+ ..|.+||+.+++.........
T Consensus 180 ~l~~~d~~-g~~~~~l~~~~~~~~~p~wSpDG~~la---------------~~s~~~~~~~l~~~~l~~g~~~~l~~~~g 243 (430)
T PRK00178 180 TLQRSDYD-GARAVTLLQSREPILSPRWSPDGKRIA---------------YVSFEQKRPRIFVQNLDTGRREQITNFEG 243 (430)
T ss_pred EEEEECCC-CCCceEEecCCCceeeeeECCCCCEEE---------------EEEcCCCCCEEEEEECCCCCEEEccCCCC
Confidence 35666655 555566667778899999999976653 22222 358889998876544333444
Q ss_pred cceeEEEccCCCEEEEE--cCC--eEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecC-C--CeEEEEeCCCc
Q psy6442 83 VPNSLEISRDGTTITVT--HGS--CVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGE-D--LKMYKFDYSTG 155 (231)
Q Consensus 83 ~~~~v~~~~~~~~~~~~--~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-d--~~i~~~d~~~~ 155 (231)
.....+|+||++.++.. .++ .|.++|..+....+.......... ..++|++..++..+. + ..|+++++.++
T Consensus 244 ~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~--~~~spDg~~i~f~s~~~g~~~iy~~d~~~g 321 (430)
T PRK00178 244 LNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLSRVTNHPAIDTE--PFWGKDGRTLYFTSDRGGKPQIYKVNVNGG 321 (430)
T ss_pred CcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeEEcccCCCCcCC--eEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 45578999999977643 232 677888877654433222222222 234788887665543 2 46888888776
Q ss_pred ceeeeccCCCCCeeEEEEcCCCCEEEEeeCC-C--cEEEEeCCCCCeeeeeeccCCcccCCCCCCcccccc
Q psy6442 156 AEIESFKGHFGPIHCVKFSPDGELYASGSED-G--TLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGHLN 223 (231)
Q Consensus 156 ~~~~~~~~h~~~V~~v~~spd~~~laS~s~d-~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (231)
+... +..........+|+|||+.++..+.+ + .|.++|+.+++... ++. .......+|.++|++.
T Consensus 322 ~~~~-lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~-lt~--~~~~~~p~~spdg~~i 388 (430)
T PRK00178 322 RAER-VTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRI-LTD--TSLDESPSVAPNGTML 388 (430)
T ss_pred CEEE-eecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEE-ccC--CCCCCCceECCCCCEE
Confidence 6332 21111223457899999988777643 3 47889998887543 332 2222345677777654
No 208
>KOG2394|consensus
Probab=99.20 E-value=3.5e-10 Score=94.60 Aligned_cols=147 Identities=17% Similarity=0.318 Sum_probs=99.6
Q ss_pred ccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcCCeEE
Q psy6442 26 GCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVT 105 (231)
Q Consensus 26 ~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~ 105 (231)
..|.++.|=|.+ ...++.+-.+|.+.++|.. +.......+....+++..+.+.
T Consensus 220 tsvT~ikWvpg~--------------~~~Fl~a~~sGnlyly~~~-------~~~~~t~p~~~~~k~~~~f~i~------ 272 (636)
T KOG2394|consen 220 SSVTCIKWVPGS--------------DSLFLVAHASGNLYLYDKE-------IVCGATAPSYQALKDGDQFAIL------ 272 (636)
T ss_pred cceEEEEEEeCC--------------CceEEEEEecCceEEeecc-------ccccCCCCcccccCCCCeeEEe------
Confidence 567777776643 3446667778999999862 1111111222223333333221
Q ss_pred EEEC-CCcceEEee-eccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEe
Q psy6442 106 FLDA-NSLELIKEH-KVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASG 183 (231)
Q Consensus 106 ~~d~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~ 183 (231)
.+.. .+..++... .....++..++ +++++.||+.++|+.+++||..+.+++..++...+...|++|||||+++++|
T Consensus 273 t~ksk~~rNPv~~w~~~~g~in~f~F--S~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtG 350 (636)
T KOG2394|consen 273 TSKSKKTRNPVARWHIGEGSINEFAF--SPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTG 350 (636)
T ss_pred eeeccccCCccceeEeccccccceeE--cCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEec
Confidence 1110 011111111 11224444444 7899999999999999999999988888888888999999999999999999
Q ss_pred eCCCcEEEEeCCCCCeee
Q psy6442 184 SEDGTLRLWQTNVGKTYG 201 (231)
Q Consensus 184 s~d~~v~iwd~~~~~~~~ 201 (231)
++|.-|.||.+..+++++
T Consensus 351 GEDDLVtVwSf~erRVVA 368 (636)
T KOG2394|consen 351 GEDDLVTVWSFEERRVVA 368 (636)
T ss_pred CCcceEEEEEeccceEEE
Confidence 999999999999999875
No 209
>KOG1517|consensus
Probab=99.19 E-value=1.1e-09 Score=98.14 Aligned_cols=179 Identities=15% Similarity=0.232 Sum_probs=118.8
Q ss_pred CCceeeeccCCCeEeeeecccc---cEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCC--CceEEEE
Q psy6442 5 GKPMLRQGDTGDWIGTFEGHKG---CVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSAS--AEVQKLE 79 (231)
Q Consensus 5 ~~~~~~~~~~g~~i~~l~gH~~---~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~--~~~~~~~ 79 (231)
..+++|+-..++.+..|..+.- .|..+.+-. ..+...+.+|+.||.||||+-... +....+.
T Consensus 1086 ~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liN-------------e~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVT 1152 (1387)
T KOG1517|consen 1086 ERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELIN-------------EQDDALLLTASSDGVIRIWKDYADKWKKPELVT 1152 (1387)
T ss_pred ceEEEEecccCceeccccCCCCCCCccceeeeec-------------ccchhheeeeccCceEEEecccccccCCceeEE
Confidence 4677888888888777765542 344444322 124567999999999999975422 1111111
Q ss_pred ----eC-------CcceeEEEccCCCEEEEEc-CCeEEEEECCCcceEEeeeccce--eEEEEEEecCCCCEEEEecCCC
Q psy6442 80 ----FG-------AVPNSLEISRDGTTITVTH-GSCVTFLDANSLELIKEHKVPAQ--VHSASLLLNSERPIFVCGGEDL 145 (231)
Q Consensus 80 ----~~-------~~~~~v~~~~~~~~~~~~~-~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~d~ 145 (231)
+. ..-.-+.|....-.++++. -..|++||.......+.+..... +++.+.. ...+.+++.|-.||
T Consensus 1153 aw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~-~~~gn~i~AGfaDG 1231 (1387)
T KOG1517|consen 1153 AWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSAD-LVHGNIIAAGFADG 1231 (1387)
T ss_pred eeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeeccc-ccCCceEEEeecCC
Confidence 00 0112334555444555554 46889999987777666544332 2222221 12368899999999
Q ss_pred eEEEEeCCCc---ceeeeccCCCCC--eeEEEEcCCCC-EEEEeeCCCcEEEEeCCCC
Q psy6442 146 KMYKFDYSTG---AEIESFKGHFGP--IHCVKFSPDGE-LYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 146 ~i~~~d~~~~---~~~~~~~~h~~~--V~~v~~spd~~-~laS~s~d~~v~iwd~~~~ 197 (231)
.+++||.+.. ..+.....|.+. |..+.+.+.|. .|+||+.||.|++||++..
T Consensus 1232 svRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~ 1289 (1387)
T KOG1517|consen 1232 SVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMS 1289 (1387)
T ss_pred ceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccC
Confidence 9999998653 245667788877 99999999875 4999999999999999873
No 210
>KOG1272|consensus
Probab=99.18 E-value=5.1e-11 Score=97.94 Aligned_cols=152 Identities=11% Similarity=0.165 Sum_probs=105.7
Q ss_pred cCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcCCeEEEE----------------------
Q psy6442 50 KNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFL---------------------- 107 (231)
Q Consensus 50 ~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~---------------------- 107 (231)
++|..|+-++.-|.+--+|..+++....+.....+.++.|-.+.++++++....+.+|
T Consensus 139 rnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~Etv~Dv~~LHneq~~AVAQK~y~yvYD~~GtElHClk~~~~v~rLeFL 218 (545)
T KOG1272|consen 139 RNGRHLLLGGRKGHLAAFDWVTKKLHFEINVMETVRDVTFLHNEQFFAVAQKKYVYVYDNNGTELHCLKRHIRVARLEFL 218 (545)
T ss_pred CCccEEEecCCccceeeeecccceeeeeeehhhhhhhhhhhcchHHHHhhhhceEEEecCCCcEEeehhhcCchhhhccc
Confidence 3667777788888888888877776666655555555555544444444444444444
Q ss_pred ------------------ECCCcceEEeeeccc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCe
Q psy6442 108 ------------------DANSLELIKEHKVPA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPI 168 (231)
Q Consensus 108 ------------------d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V 168 (231)
|.+.++.+..+.... ..... .-+|...++-.|...|++-+|...+.+++-.+..|.++|
T Consensus 219 PyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm--~qNP~NaVih~GhsnGtVSlWSP~skePLvKiLcH~g~V 296 (545)
T KOG1272|consen 219 PYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVM--KQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPV 296 (545)
T ss_pred chhheeeecccCCceEEEeechhhhhHHHHccCCccchh--hcCCccceEEEcCCCceEEecCCCCcchHHHHHhcCCCc
Confidence 444443333332221 11112 226666677789999999999998888888888899999
Q ss_pred eEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeee
Q psy6442 169 HCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLW 203 (231)
Q Consensus 169 ~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~ 203 (231)
.++++.|+|+++||++.|+.++|||++......+.
T Consensus 297 ~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~ 331 (545)
T KOG1272|consen 297 SSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTY 331 (545)
T ss_pred ceEEECCCCcEEeecccccceeEeeecccccccee
Confidence 99999999999999999999999999887754433
No 211
>KOG2139|consensus
Probab=99.18 E-value=1.8e-09 Score=86.58 Aligned_cols=149 Identities=21% Similarity=0.277 Sum_probs=107.2
Q ss_pred EEEEEeCCCCEEEEeCCCCCceEEEEe--CCcceeEEEccCCC-EEEEEcCCeEEEEECCCcceE------------Eee
Q psy6442 54 RLISCAEDKTVRLWDVSASAEVQKLEF--GAVPNSLEISRDGT-TITVTHGSCVTFLDANSLELI------------KEH 118 (231)
Q Consensus 54 ~l~s~s~D~ti~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~-~~~~~~~~~i~~~d~~~~~~~------------~~~ 118 (231)
.++++..|.+|+||+-.+ ++...++. +..+.+++|.|-+. .+++++.+.|.+|........ +..
T Consensus 112 ~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~gIciW~~s~tln~~r~~~~~s~~~~qvl 190 (445)
T KOG2139|consen 112 AFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRTLNANRNIRMMSTHHLQVL 190 (445)
T ss_pred hhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecceeEEEEcCcccccccccccccccchhhe
Confidence 378888999999999887 55455554 46789999999765 567788888999975432111 112
Q ss_pred ec--cceeEEEEEEecCCCCEEEEecCC-CeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCC
Q psy6442 119 KV--PAQVHSASLLLNSERPIFVCGGED-LKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 119 ~~--~~~~~~~~~~~~~~~~~~~~g~~d-~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~ 195 (231)
.. ..++..+. +++++..+++++.+ ..|.+||..++..+.....--+.+.-+.||||+.+|..+.-|+..++|+..
T Consensus 191 ~~pgh~pVtsmq--wn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~ 268 (445)
T KOG2139|consen 191 QDPGHNPVTSMQ--WNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQEN 268 (445)
T ss_pred eCCCCceeeEEE--EcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhc
Confidence 22 23444444 48888888888765 579999999887654443344668889999999999999999999999766
Q ss_pred CCCeeeeeec
Q psy6442 196 VGKTYGLWKC 205 (231)
Q Consensus 196 ~~~~~~~~~~ 205 (231)
.......|-.
T Consensus 269 q~wt~erw~l 278 (445)
T KOG2139|consen 269 QSWTKERWIL 278 (445)
T ss_pred ccceecceec
Confidence 5555445543
No 212
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.17 E-value=4.6e-09 Score=80.18 Aligned_cols=125 Identities=14% Similarity=0.204 Sum_probs=87.0
Q ss_pred eEeeeec-ccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCE
Q psy6442 17 WIGTFEG-HKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTT 95 (231)
Q Consensus 17 ~i~~l~g-H~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 95 (231)
.+..+.- ..++|.+++|+|+++.++ ++++..++.|.+||++ .+.+..+. ....+.+.|+|+|+.
T Consensus 50 ~~~~i~l~~~~~I~~~~WsP~g~~fa-------------vi~g~~~~~v~lyd~~-~~~i~~~~-~~~~n~i~wsP~G~~ 114 (194)
T PF08662_consen 50 PVESIELKKEGPIHDVAWSPNGNEFA-------------VIYGSMPAKVTLYDVK-GKKIFSFG-TQPRNTISWSPDGRF 114 (194)
T ss_pred ccceeeccCCCceEEEEECcCCCEEE-------------EEEccCCcccEEEcCc-ccEeEeec-CCCceEEEECCCCCE
Confidence 3444432 356799999999876653 4455677899999996 44444443 356789999999998
Q ss_pred EEEEc----CCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecC------CCeEEEEeCCCcceeee
Q psy6442 96 ITVTH----GSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGE------DLKMYKFDYSTGAEIES 160 (231)
Q Consensus 96 ~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~------d~~i~~~d~~~~~~~~~ 160 (231)
++++. .+.+.+||..+.+.+.....+. . ..+.++|+|+.++++.. |..+++|+. .|+++..
T Consensus 115 l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~~-~--t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~-~G~~l~~ 185 (194)
T PF08662_consen 115 LVLAGFGNLNGDLEFWDVRKKKKISTFEHSD-A--TDVEWSPDGRYLATATTSPRLRVDNGFKIWSF-QGRLLYK 185 (194)
T ss_pred EEEEEccCCCcEEEEEECCCCEEeeccccCc-E--EEEEEcCCCCEEEEEEeccceeccccEEEEEe-cCeEeEe
Confidence 87653 3579999999887776665443 2 34456999999998764 456778876 4555543
No 213
>KOG1517|consensus
Probab=99.16 E-value=2.2e-09 Score=96.20 Aligned_cols=149 Identities=17% Similarity=0.317 Sum_probs=98.9
Q ss_pred CEEEEEeCCCCEEEEeCCCCCceEEEEeCC--cceeEEEccC-CCEEEEE-cCCeEEEEECCCcce---E---Eeeeccc
Q psy6442 53 TRLISCAEDKTVRLWDVSASAEVQKLEFGA--VPNSLEISRD-GTTITVT-HGSCVTFLDANSLEL---I---KEHKVPA 122 (231)
Q Consensus 53 ~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~--~~~~v~~~~~-~~~~~~~-~~~~i~~~d~~~~~~---~---~~~~~~~ 122 (231)
+.|+++|.-+.|+|||.....+...+..+. .++++...-. +..++++ .||.+++||.+.... + +.+....
T Consensus 1178 G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~ 1257 (1387)
T KOG1517|consen 1178 GHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVE 1257 (1387)
T ss_pred CeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcc
Confidence 445556667999999999988887776653 4555554332 4566665 579999999764332 2 2233333
Q ss_pred eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCccee--eeccCCC--C-CeeEEEEcCCCCEEEEeeCCCcEEEEeCCCC
Q psy6442 123 QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEI--ESFKGHF--G-PIHCVKFSPDGELYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~--~~~~~h~--~-~V~~v~~spd~~~laS~s~d~~v~iwd~~~~ 197 (231)
++....+...+.+ .+++|+.+|.|++||++..... -+...|- + ..+++..+++..++|+|+. +.|+||++.-.
T Consensus 1258 ~Iv~~slq~~G~~-elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~ 1335 (1387)
T KOG1517|consen 1258 PIVHLSLQRQGLG-ELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGE 1335 (1387)
T ss_pred cceeEEeecCCCc-ceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecChh
Confidence 3444444222333 4899999999999999864222 1222332 4 5899999999999999998 99999998543
Q ss_pred Ceeeeee
Q psy6442 198 KTYGLWK 204 (231)
Q Consensus 198 ~~~~~~~ 204 (231)
.....+
T Consensus 1336 -~l~~~k 1341 (1387)
T KOG1517|consen 1336 -QLNIIK 1341 (1387)
T ss_pred -hhcccc
Confidence 333334
No 214
>KOG1587|consensus
Probab=99.16 E-value=2.1e-09 Score=93.13 Aligned_cols=182 Identities=19% Similarity=0.204 Sum_probs=120.6
Q ss_pred CCcCCCceeeeccCCCe--Eeee----ecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCc
Q psy6442 1 MCVDGKPMLRQGDTGDW--IGTF----EGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAE 74 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~--i~~l----~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~ 74 (231)
|+.+|+|-+||...+.. ...+ ..|..+|+.+.|..+. . +..++|+|.||+|..|+++--..
T Consensus 261 G~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~------------~-~~~f~s~ssDG~i~~W~~~~l~~ 327 (555)
T KOG1587|consen 261 GCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNE------------H-NTEFFSLSSDGSICSWDTDMLSL 327 (555)
T ss_pred eccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccC------------C-CCceEEEecCCcEeeeecccccc
Confidence 57899999999976654 2222 3688999999997642 1 35689999999999998764322
Q ss_pred -e-----EEEE-------eCCcceeEEEccCCC-EEEE-EcCCeEEEEECCCcce-E-------Eeeec-cceeEEEEEE
Q psy6442 75 -V-----QKLE-------FGAVPNSLEISRDGT-TITV-THGSCVTFLDANSLEL-I-------KEHKV-PAQVHSASLL 130 (231)
Q Consensus 75 -~-----~~~~-------~~~~~~~v~~~~~~~-~~~~-~~~~~i~~~d~~~~~~-~-------~~~~~-~~~~~~~~~~ 130 (231)
. .... -...++++.|.+... .+++ +..|.|...+...... . ..+.. ..++..+..
T Consensus 328 P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~- 406 (555)
T KOG1587|consen 328 PVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSR- 406 (555)
T ss_pred chhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeec-
Confidence 1 0011 012467888887665 3444 4567776644322211 1 11111 234444433
Q ss_pred ecCCCC-EEEEecCCCeEEEEeCC-CcceeeeccCCCCCeeEEEEcCCC-CEEEEeeCCCcEEEEeCCCCC
Q psy6442 131 LNSERP-IFVCGGEDLKMYKFDYS-TGAEIESFKGHFGPIHCVKFSPDG-ELYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 131 ~~~~~~-~~~~g~~d~~i~~~d~~-~~~~~~~~~~h~~~V~~v~~spd~-~~laS~s~d~~v~iwd~~~~~ 198 (231)
+|-+. ++++++ |-++++|... ...++..+..+...|++++|||-. ..|+++..||.|.|||+....
T Consensus 407 -nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~ 475 (555)
T KOG1587|consen 407 -NPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDD 475 (555)
T ss_pred -CCCccceeeeec-cceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccc
Confidence 55444 344444 9999999887 556677788888899999999975 588999999999999986544
No 215
>KOG4190|consensus
Probab=99.15 E-value=1.1e-10 Score=98.19 Aligned_cols=172 Identities=19% Similarity=0.304 Sum_probs=119.1
Q ss_pred EeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCC-------CceEEEE-eCCcceeEEE
Q psy6442 18 IGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSAS-------AEVQKLE-FGAVPNSLEI 89 (231)
Q Consensus 18 i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~-------~~~~~~~-~~~~~~~v~~ 89 (231)
++.|.||+.+|..+.-- .+...++++|.|+|||+|.++.. .|..+.+ +..++.++.+
T Consensus 728 L~nf~GH~~~iRai~Ai---------------dNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igf 792 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAI---------------DNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGF 792 (1034)
T ss_pred eecccCcHHHhHHHHhc---------------ccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceee
Confidence 56678888888766322 24556899999999999998642 2333332 4567788888
Q ss_pred ccCCCEEEEEcCCeEEEEECCCcceEEeee-cc--ceeEEEEEEecCCCCEEEEe-cCCCeEEEEeCCCcceeeec----
Q psy6442 90 SRDGTTITVTHGSCVTFLDANSLELIKEHK-VP--AQVHSASLLLNSERPIFVCG-GEDLKMYKFDYSTGAEIESF---- 161 (231)
Q Consensus 90 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~g-~~d~~i~~~d~~~~~~~~~~---- 161 (231)
-.+-+.+ +++++.+++||.--...+.... .+ .....+....+-+..+++.| +...+++++|.+..+-...+
T Consensus 793 L~~lr~i-~ScD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcn 871 (1034)
T KOG4190|consen 793 LADLRSI-ASCDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCN 871 (1034)
T ss_pred eecccee-eeccCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEecc
Confidence 7775554 5678899999976555443221 11 11111222223344455555 67789999998877644333
Q ss_pred -cCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeec
Q psy6442 162 -KGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKC 205 (231)
Q Consensus 162 -~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~ 205 (231)
.+..+.+++++..|.|+.+|.+-.+|+|.+-|.++|+.++.|+-
T Consensus 872 a~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrp 916 (1034)
T KOG4190|consen 872 APGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRP 916 (1034)
T ss_pred CCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCc
Confidence 34556789999999999999999999999999999999998864
No 216
>KOG0290|consensus
Probab=99.15 E-value=2.9e-09 Score=83.13 Aligned_cols=168 Identities=14% Similarity=0.160 Sum_probs=116.3
Q ss_pred CcCCCceeeeccCCCe---EeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEE
Q psy6442 2 CVDGKPMLRQGDTGDW---IGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKL 78 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~---i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~ 78 (231)
|.|-|+.+|+..+|.- --.|-.|...|+.++|..++. +.++|+|.||++|++|+++.+--..+
T Consensus 170 SiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~--------------~~FASvgaDGSvRmFDLR~leHSTII 235 (364)
T KOG0290|consen 170 SIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSR--------------DVFASVGADGSVRMFDLRSLEHSTII 235 (364)
T ss_pred cccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCcc--------------ceEEEecCCCcEEEEEecccccceEE
Confidence 6788999999998732 334778999999999998642 45899999999999999987654333
Q ss_pred EeC----CcceeEEEccCCCEEEE--E-cCCeEEEEECCCcc-eEEeee-ccceeEEEEEEecCCCCEEEEecCCCeEEE
Q psy6442 79 EFG----AVPNSLEISRDGTTITV--T-HGSCVTFLDANSLE-LIKEHK-VPAQVHSASLLLNSERPIFVCGGEDLKMYK 149 (231)
Q Consensus 79 ~~~----~~~~~v~~~~~~~~~~~--~-~~~~i~~~d~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~ 149 (231)
.-. .+...++|++....+.+ . ....+.+.|++... .+.+.+ ....++.+.+.++ ....+.++++|....+
T Consensus 236 YE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPh-S~~hictaGDD~qali 314 (364)
T KOG0290|consen 236 YEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPH-SSSHICTAGDDCQALI 314 (364)
T ss_pred ecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCC-CCceeeecCCcceEEE
Confidence 322 24567888887664332 2 34678888977543 233332 3456777777543 4456888999999999
Q ss_pred EeCCCcce------eeeccCCCCCeeEEEEcCC-CCEEEEeeC
Q psy6442 150 FDYSTGAE------IESFKGHFGPIHCVKFSPD-GELYASGSE 185 (231)
Q Consensus 150 ~d~~~~~~------~~~~~~h~~~V~~v~~spd-~~~laS~s~ 185 (231)
||+.+... +-.+. -.++|+.+.|+|. +..++.|..
T Consensus 315 WDl~q~~~~~~~dPilay~-a~~EVNqi~Ws~~~~Dwiai~~~ 356 (364)
T KOG0290|consen 315 WDLQQMPRENGEDPILAYT-AGGEVNQIQWSSSQPDWIAICFG 356 (364)
T ss_pred EecccccccCCCCchhhhh-ccceeeeeeecccCCCEEEEEec
Confidence 99965432 11122 4578999999985 556666553
No 217
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.15 E-value=1.4e-08 Score=87.11 Aligned_cols=175 Identities=12% Similarity=0.091 Sum_probs=104.7
Q ss_pred CCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCC--CEEEEeCCCCCceEEEEeCC
Q psy6442 5 GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDK--TVRLWDVSASAEVQKLEFGA 82 (231)
Q Consensus 5 ~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~--ti~iwd~~~~~~~~~~~~~~ 82 (231)
.++++|+..+|+... +..+.+...+..|+|+|+.+ +++.+.++ .|.+||+.+++.........
T Consensus 228 ~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG~~l--------------~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~~ 292 (433)
T PRK04922 228 SAIYVQDLATGQREL-VASFRGINGAPSFSPDGRRL--------------ALTLSRDGNPEIYVMDLGSRQLTRLTNHFG 292 (433)
T ss_pred cEEEEEECCCCCEEE-eccCCCCccCceECCCCCEE--------------EEEEeCCCCceEEEEECCCCCeEECccCCC
Confidence 357777777665432 33344445567788876554 23445555 58899998876543333333
Q ss_pred cceeEEEccCCCEEEEEcC--C--eEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCC---CeEEEEeCCCc
Q psy6442 83 VPNSLEISRDGTTITVTHG--S--CVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGED---LKMYKFDYSTG 155 (231)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~~--~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d---~~i~~~d~~~~ 155 (231)
.....+|+||++.++...+ + .+..++..+.+..+......... ...++|++..++..+.+ ..|++||+.++
T Consensus 293 ~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~~~~--~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g 370 (433)
T PRK04922 293 IDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQGNYNA--RASVSPDGKKIAMVHGSGGQYRIAVMDLSTG 370 (433)
T ss_pred CccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecCCCCcc--CEEECCCCCEEEEEECCCCceeEEEEECCCC
Confidence 4567899999997765432 2 46666765544322221111121 23448888887765433 36999999777
Q ss_pred ceeeeccCCCCCeeEEEEcCCCCEEEEeeCC---CcEEEEeCCCCC
Q psy6442 156 AEIESFKGHFGPIHCVKFSPDGELYASGSED---GTLRLWQTNVGK 198 (231)
Q Consensus 156 ~~~~~~~~h~~~V~~v~~spd~~~laS~s~d---~~v~iwd~~~~~ 198 (231)
+.. .+. +........|+|||++++..+.+ ..|.++++..+.
T Consensus 371 ~~~-~Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~~ 414 (433)
T PRK04922 371 SVR-TLT-PGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTDGRV 414 (433)
T ss_pred CeE-ECC-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECCCCc
Confidence 644 332 22234567899999987776653 357777875443
No 218
>KOG1188|consensus
Probab=99.15 E-value=3.4e-10 Score=89.89 Aligned_cols=178 Identities=16% Similarity=0.210 Sum_probs=121.7
Q ss_pred cCCCceeeeccCCCe-Eeeee-cccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCC----ceE
Q psy6442 3 VDGKPMLRQGDTGDW-IGTFE-GHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASA----EVQ 76 (231)
Q Consensus 3 ~d~~~~~~~~~~g~~-i~~l~-gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~----~~~ 76 (231)
.|..|.|||...-+. ++.|. .|.+-|+++.|.|. +...|+|||.||-|.++|+.... .+.
T Consensus 141 s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~--------------~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~ 206 (376)
T KOG1188|consen 141 SDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPS--------------DPNLLLSGSVDGLVNLFDTKKDNEEDALLH 206 (376)
T ss_pred CceEEEEEEeccccchhhhhhhhccCcceeEEecCC--------------CCCeEEeecccceEEeeecCCCcchhhHHH
Confidence 456789999965554 77764 69999999999995 56789999999999999986542 234
Q ss_pred EEEeCCcceeEEEccCC--CEEEEEcCCeEEEEECCCcceEEeeecc-c--------eeEEEE--EEecCCCCEEEEecC
Q psy6442 77 KLEFGAVPNSLEISRDG--TTITVTHGSCVTFLDANSLELIKEHKVP-A--------QVHSAS--LLLNSERPIFVCGGE 143 (231)
Q Consensus 77 ~~~~~~~~~~v~~~~~~--~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~--------~~~~~~--~~~~~~~~~~~~g~~ 143 (231)
.+.....+-.+.|..++ +...+++.....+|++..........-+ . ...... .....+...++.++.
T Consensus 207 viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~~~~~~l~g~ 286 (376)
T KOG1188|consen 207 VINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPGDKDTCALAGT 286 (376)
T ss_pred hhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecccCCCcceEEEecc
Confidence 45567788899999988 5666788888999998766543222111 0 000001 111233444444444
Q ss_pred -CCeEEEEeC---CCc---ceeeeccC-CCCCeeEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 144 -DLKMYKFDY---STG---AEIESFKG-HFGPIHCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 144 -d~~i~~~d~---~~~---~~~~~~~~-h~~~V~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
-++..++.+ .++ +.+..+.| |...|+++.|.-.+.++.||++||.+.+|..
T Consensus 287 ~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~ 345 (376)
T KOG1188|consen 287 DSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKV 345 (376)
T ss_pred ccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEec
Confidence 343333332 222 34455666 7788899999988999999999999999985
No 219
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.13 E-value=1.9e-10 Score=64.15 Aligned_cols=38 Identities=45% Similarity=0.958 Sum_probs=36.2
Q ss_pred ceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEe
Q psy6442 156 AEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQ 193 (231)
Q Consensus 156 ~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd 193 (231)
+++.++.+|..+|++|+|+|++++|+|++.|++|+|||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 56788999999999999999999999999999999997
No 220
>KOG0644|consensus
Probab=99.13 E-value=1.9e-11 Score=106.70 Aligned_cols=119 Identities=22% Similarity=0.478 Sum_probs=94.6
Q ss_pred CeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe-CCcceeEEEccCCC
Q psy6442 16 DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF-GAVPNSLEISRDGT 94 (231)
Q Consensus 16 ~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~ 94 (231)
+.+..|.||...|+|+.|... +.+++|++.|..+|||...++.++..+.- ...+..
T Consensus 181 k~ikrLlgH~naVyca~fDrt---------------g~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditd-------- 237 (1113)
T KOG0644|consen 181 KNIKRLLGHRNAVYCAIFDRT---------------GRYIITGSDDRLVKIWSMETARCLASCRGHSGDITD-------- 237 (1113)
T ss_pred HHHHHHHhhhhheeeeeeccc---------------cceEeecCccceeeeeeccchhhhccCCCCccccch--------
Confidence 456668899999999988765 55689999999999999887776544321 111111
Q ss_pred EEEEEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEc
Q psy6442 95 TITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFS 174 (231)
Q Consensus 95 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~s 174 (231)
...+.+..++++++.|..|++|-+..+.++..+.||+++|++++|+
T Consensus 238 ----------------------------------lavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafs 283 (1113)
T KOG0644|consen 238 ----------------------------------LAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFS 283 (1113)
T ss_pred ----------------------------------hccchhhhhhhhcccCceEEEEecCCCchHHHHhccccceeeeccC
Confidence 1114455668889999999999999999999999999999999999
Q ss_pred CCCCEEEEeeCCCcEEEEeCC
Q psy6442 175 PDGELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 175 pd~~~laS~s~d~~v~iwd~~ 195 (231)
|-. +.+.||++++||.+
T Consensus 284 P~~----sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 284 PRA----SSSDDGTCRIWDAR 300 (1113)
T ss_pred ccc----cCCCCCceEecccc
Confidence 975 78899999999987
No 221
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.12 E-value=3.1e-08 Score=85.19 Aligned_cols=195 Identities=14% Similarity=0.181 Sum_probs=113.8
Q ss_pred CceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCC--CEEEEeCCCCCceEEEEeCCc
Q psy6442 6 KPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDK--TVRLWDVSASAEVQKLEFGAV 83 (231)
Q Consensus 6 ~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~--ti~iwd~~~~~~~~~~~~~~~ 83 (231)
++.+++.+ |...+.+..+...+.+..|+|||+.++. +...++ .|.+||+.+++..........
T Consensus 199 ~l~i~d~d-G~~~~~l~~~~~~~~~p~wSPDG~~La~--------------~s~~~g~~~L~~~dl~tg~~~~lt~~~g~ 263 (448)
T PRK04792 199 QLMIADYD-GYNEQMLLRSPEPLMSPAWSPDGRKLAY--------------VSFENRKAEIFVQDIYTQVREKVTSFPGI 263 (448)
T ss_pred EEEEEeCC-CCCceEeecCCCcccCceECCCCCEEEE--------------EEecCCCcEEEEEECCCCCeEEecCCCCC
Confidence 44455533 4444556666778888999998766532 222223 578889887765433333444
Q ss_pred ceeEEEccCCCEEEEE--cCC--eEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecC---CCeEEEEeCCCcc
Q psy6442 84 PNSLEISRDGTTITVT--HGS--CVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGE---DLKMYKFDYSTGA 156 (231)
Q Consensus 84 ~~~v~~~~~~~~~~~~--~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---d~~i~~~d~~~~~ 156 (231)
....+|+||++.++.. .++ .|.++|..+.+..+.......... ..++|+++.++..+. ...|+++|..+++
T Consensus 264 ~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~~~~~~~--p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~ 341 (448)
T PRK04792 264 NGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALTRITRHRAIDTE--PSWHPDGKSLIFTSERGGKPQIYRVNLASGK 341 (448)
T ss_pred cCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEECccCCCCccc--eEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence 4578999999977653 233 577788776554333222221222 234788887765543 2468888887765
Q ss_pred eeee-ccCCCCCeeEEEEcCCCCEEEEeeC-CCc--EEEEeCCCCCeeeeeeccCCcccCCCCCCccccc
Q psy6442 157 EIES-FKGHFGPIHCVKFSPDGELYASGSE-DGT--LRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGHL 222 (231)
Q Consensus 157 ~~~~-~~~h~~~V~~v~~spd~~~laS~s~-d~~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (231)
.... +.++. ....+|+|||++|+..+. ++. |.++|+.+++... ++. .......++.++|.+
T Consensus 342 ~~~Lt~~g~~--~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~-lt~--~~~d~~ps~spdG~~ 406 (448)
T PRK04792 342 VSRLTFEGEQ--NLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQV-LTS--TRLDESPSVAPNGTM 406 (448)
T ss_pred EEEEecCCCC--CcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEE-ccC--CCCCCCceECCCCCE
Confidence 4322 23332 345789999998877654 343 4556888877543 332 112223356666654
No 222
>KOG4227|consensus
Probab=99.11 E-value=3.7e-09 Score=85.68 Aligned_cols=161 Identities=16% Similarity=0.174 Sum_probs=118.0
Q ss_pred eecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCC------CCCceEEEE--eCCcceeEEEccC
Q psy6442 21 FEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVS------ASAEVQKLE--FGAVPNSLEISRD 92 (231)
Q Consensus 21 l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~------~~~~~~~~~--~~~~~~~v~~~~~ 92 (231)
+.+|.|+|.++.|+.+ ++.|++++.|..+++|.+. ..+++.... +...+.+++|...
T Consensus 52 ~~~H~GCiNAlqFS~N---------------~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~ 116 (609)
T KOG4227|consen 52 VREHTGCINALQFSHN---------------DRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLE 116 (609)
T ss_pred hhhhccccceeeeccC---------------CeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccC
Confidence 5699999999999975 5668999999999999874 224444433 3468999999988
Q ss_pred CCEEEEE-cCCeEEEEECCCcceEEeeeccc---eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcc-eeee--ccCCC
Q psy6442 93 GTTITVT-HGSCVTFLDANSLELIKEHKVPA---QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA-EIES--FKGHF 165 (231)
Q Consensus 93 ~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~-~~~~--~~~h~ 165 (231)
...++.+ .++++.+-|+.+.+.+-.+.... .+.. +..+|....+++.+.++.+.+||.+..+ .+.. +-...
T Consensus 117 N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~--m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~ 194 (609)
T KOG4227|consen 117 NRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYH--MDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSG 194 (609)
T ss_pred CeeEecCCCcceeEeeecccceeeeeecccCcccceee--cccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCC
Confidence 8777765 35788888888777665543322 3333 3336777789999999999999997655 2222 12233
Q ss_pred CCeeEEEEcCC-CCEEEEeeCCCcEEEEeCCCCC
Q psy6442 166 GPIHCVKFSPD-GELYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 166 ~~V~~v~~spd-~~~laS~s~d~~v~iwd~~~~~ 198 (231)
....++.|+|. ..+|++++..+-+.+||.+..+
T Consensus 195 ~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~ 228 (609)
T KOG4227|consen 195 KNFYTAEFHPETPALILVNSETGGPNVFDRRMQA 228 (609)
T ss_pred ccceeeeecCCCceeEEeccccCCCCceeecccc
Confidence 45678999995 6789999999999999986544
No 223
>KOG0974|consensus
Probab=99.09 E-value=1.2e-09 Score=97.51 Aligned_cols=138 Identities=20% Similarity=0.373 Sum_probs=103.6
Q ss_pred CcCCCceeeeccCCCeEe-eeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe
Q psy6442 2 CVDGKPMLRQGDTGDWIG-TFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF 80 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~-~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~ 80 (231)
+.=+.+.+|.+. +.... .+.||.|.++.+.++.+ +.+++|+|.|+++|+|++.+.+...
T Consensus 152 sv~~~iivW~~~-~dn~p~~l~GHeG~iF~i~~s~d---------------g~~i~s~SdDRsiRlW~i~s~~~~~---- 211 (967)
T KOG0974|consen 152 SVFGEIIVWKPH-EDNKPIRLKGHEGSIFSIVTSLD---------------GRYIASVSDDRSIRLWPIDSREVLG---- 211 (967)
T ss_pred cccccEEEEecc-ccCCcceecccCCceEEEEEccC---------------CcEEEEEecCcceeeeecccccccC----
Confidence 345778999987 44444 48999999999999887 4568999999999999998865432
Q ss_pred CCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeee
Q psy6442 81 GAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIES 160 (231)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~ 160 (231)
...| +-..++| .+++ .+. .++++++|.+.++|+. .++.+..
T Consensus 212 -----~~~f-----------gHsaRvw------------------~~~~--~~n--~i~t~gedctcrvW~~-~~~~l~~ 252 (967)
T KOG0974|consen 212 -----CTGF-----------GHSARVW------------------ACCF--LPN--RIITVGEDCTCRVWGV-NGTQLEV 252 (967)
T ss_pred -----cccc-----------cccceeE------------------EEEe--ccc--eeEEeccceEEEEEec-ccceehh
Confidence 0111 1112223 2333 334 6899999999999965 4455668
Q ss_pred ccCCC-CCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCC
Q psy6442 161 FKGHF-GPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 161 ~~~h~-~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~ 198 (231)
+++|. .-|..++..++...++|++.|+.+++|+.....
T Consensus 253 y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r~ 291 (967)
T KOG0974|consen 253 YDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGRG 291 (967)
T ss_pred hhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhccc
Confidence 88886 569999999999999999999999999985543
No 224
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.07 E-value=5.8e-08 Score=83.05 Aligned_cols=202 Identities=12% Similarity=0.065 Sum_probs=117.3
Q ss_pred CCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCC--CEEEEeCCCCCceEEEEeCC
Q psy6442 5 GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDK--TVRLWDVSASAEVQKLEFGA 82 (231)
Q Consensus 5 ~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~--ti~iwd~~~~~~~~~~~~~~ 82 (231)
..+++.+.+ |...+.|..+.+.+.+-.|+|||+.++ .+++...++ .|.+.++..++..+...+..
T Consensus 165 ~~l~~~d~d-G~~~~~lt~~~~~~~sP~wSPDG~~~~------------~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g 231 (428)
T PRK01029 165 GELWSVDYD-GQNLRPLTQEHSLSITPTWMHIGSGFP------------YLYVSYKLGVPKIFLGSLENPAGKKILALQG 231 (428)
T ss_pred ceEEEEcCC-CCCceEcccCCCCcccceEccCCCceE------------EEEEEccCCCceEEEEECCCCCceEeecCCC
Confidence 356666654 444555665666677889999975421 122333333 46667888776655555555
Q ss_pred cceeEEEccCCCEEEEEcC--C--e--EEEEECCCc---ceEEeeeccceeEEEEEEecCCCCEEEEec-CCC--eEEEE
Q psy6442 83 VPNSLEISRDGTTITVTHG--S--C--VTFLDANSL---ELIKEHKVPAQVHSASLLLNSERPIFVCGG-EDL--KMYKF 150 (231)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~~--~--~--i~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~d~--~i~~~ 150 (231)
.....+|+|||+.++...+ + . +..|+.... ...+........ .....++|++..++..+ .++ .|+++
T Consensus 232 ~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~-~~~p~wSPDG~~Laf~s~~~g~~~ly~~ 310 (428)
T PRK01029 232 NQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGT-QGNPSFSPDGTRLVFVSNKDGRPRIYIM 310 (428)
T ss_pred CccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCC-cCCeEECCCCCEEEEEECCCCCceEEEE
Confidence 5667899999987765431 2 2 333555432 212222111111 11234489998777654 344 46666
Q ss_pred eCCC-cceeeeccCCCCCeeEEEEcCCCCEEEEeeCC---CcEEEEeCCCCCeeeeeeccCCcccCCCCCCccccc
Q psy6442 151 DYST-GAEIESFKGHFGPIHCVKFSPDGELYASGSED---GTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGHL 222 (231)
Q Consensus 151 d~~~-~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (231)
++.. +.....+..+...+....|||||+.|+..+.+ ..|.+||+.+++...+... +......+|.++|++
T Consensus 311 ~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~--~~~~~~p~wSpDG~~ 384 (428)
T PRK01029 311 QIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTS--PENKESPSWAIDSLH 384 (428)
T ss_pred ECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCC--CCCccceEECCCCCE
Confidence 6542 23344444455567788999999988876643 4689999999987655432 122234556666654
No 225
>KOG2139|consensus
Probab=99.06 E-value=1.1e-08 Score=82.12 Aligned_cols=182 Identities=17% Similarity=0.259 Sum_probs=118.2
Q ss_pred eecccccEEEEEECCCCceeEeccccccccCCCEEEEEeC-CCCEEEEeCCCCCceEEEEeC-CcceeEEEccCCCEEEE
Q psy6442 21 FEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAE-DKTVRLWDVSASAEVQKLEFG-AVPNSLEISRDGTTITV 98 (231)
Q Consensus 21 l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~-D~ti~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ 98 (231)
.+|| -.|.++.|++||. .|+++|. |..|+|||..++.++...... +.+.-+.|+||+..+++
T Consensus 192 ~pgh-~pVtsmqwn~dgt---------------~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfa 255 (445)
T KOG2139|consen 192 DPGH-NPVTSMQWNEDGT---------------ILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFA 255 (445)
T ss_pred CCCC-ceeeEEEEcCCCC---------------EEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEE
Confidence 3466 6899999999854 4666665 468999999999887666443 45678899999997765
Q ss_pred -EcCCeEEEEECCCcceEEee-eccceeEEEEEEecCCCCEEEEe-cCCCeEEEE--eCCCcc-----------eeeec-
Q psy6442 99 -THGSCVTFLDANSLELIKEH-KVPAQVHSASLLLNSERPIFVCG-GEDLKMYKF--DYSTGA-----------EIESF- 161 (231)
Q Consensus 99 -~~~~~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g-~~d~~i~~~--d~~~~~-----------~~~~~- 161 (231)
..+...++|+........+. -.+..+...++ +|.|++++.. +....++-. +.+.+. ++..+
T Consensus 256 At~davfrlw~e~q~wt~erw~lgsgrvqtacW--spcGsfLLf~~sgsp~lysl~f~~~~~~~~~~~~~k~~lliaDL~ 333 (445)
T KOG2139|consen 256 ATCDAVFRLWQENQSWTKERWILGSGRVQTACW--SPCGSFLLFACSGSPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQ 333 (445)
T ss_pred ecccceeeeehhcccceecceeccCCceeeeee--cCCCCEEEEEEcCCceEEEEeecCCCccccCcccceeeeeeccch
Confidence 56888899965433322222 22335555555 7777765543 333334322 211111 11111
Q ss_pred -----cC---CCCCeeEEEEcCCCCEEEEeeCCCc--------EEEEeCCCCCeeeee--eccCCcccCCCCCCccc
Q psy6442 162 -----KG---HFGPIHCVKFSPDGELYASGSEDGT--------LRLWQTNVGKTYGLW--KCIEGGLNNSLGLDSSG 220 (231)
Q Consensus 162 -----~~---h~~~V~~v~~spd~~~laS~s~d~~--------v~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 220 (231)
.+ -.+++.+++|.|.|.+||+--..+. |.+||.+....+.+- ....+..+.+|+|.+..
T Consensus 334 e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~cg~i~ge~P~~IsF~pl~ 410 (445)
T KOG2139|consen 334 EVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSYCGMIGGEYPAYISFGPLK 410 (445)
T ss_pred hhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEecccccCCCCceEEeeecc
Confidence 11 1467889999999999998765444 678998887777665 55667778888887744
No 226
>KOG1334|consensus
Probab=99.03 E-value=1.2e-09 Score=90.41 Aligned_cols=196 Identities=18% Similarity=0.262 Sum_probs=136.6
Q ss_pred CCcCCCceeeec-cCCCe--EeeeecccccEEEEEECCCC-ceeEeccccccc---------------------------
Q psy6442 1 MCVDGKPMLRQG-DTGDW--IGTFEGHKGCVWGVDINKDA-SKAASGAADFQA--------------------------- 49 (231)
Q Consensus 1 ~~~d~~~~~~~~-~~g~~--i~~l~gH~~~V~~~~~~~~~-~~~~s~~~d~~~--------------------------- 49 (231)
++.||+||+-.. .+|.+ ...+..|.+.|+.++.-|+. ..+.+.+.|..+
T Consensus 205 ~s~dgqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L 284 (559)
T KOG1334|consen 205 SSRDGQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGL 284 (559)
T ss_pred ccccCceeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceee
Confidence 367899988776 34544 44577899999999998875 566666554221
Q ss_pred -------cCCCEEEEEeCCCCEEEEeCCCCCce------EEE-------EeCCcceeEEEccCCCEEEEEc-CCeEEEEE
Q psy6442 50 -------KNNTRLISCAEDKTVRLWDVSASAEV------QKL-------EFGAVPNSLEISRDGTTITVTH-GSCVTFLD 108 (231)
Q Consensus 50 -------~~~~~l~s~s~D~ti~iwd~~~~~~~------~~~-------~~~~~~~~v~~~~~~~~~~~~~-~~~i~~~d 108 (231)
++...+++++.|.-+++||.+.-... .++ .....+++++++.++.-+.++. +..|.++.
T Consensus 285 ~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~ 364 (559)
T KOG1334|consen 285 YTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFN 364 (559)
T ss_pred eeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEec
Confidence 24457888999999999987643211 111 1124578999997777666654 45666664
Q ss_pred CCCcce------------EEe-eec---cceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEE
Q psy6442 109 ANSLEL------------IKE-HKV---PAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVK 172 (231)
Q Consensus 109 ~~~~~~------------~~~-~~~---~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~ 172 (231)
.....- .+. ++. ...+..+-+ +.|...++++|++.|.|.+|+-.+++++.-++|...-|+||.
T Consensus 365 ~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNF-fGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLE 443 (559)
T KOG1334|consen 365 KSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNF-FGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLE 443 (559)
T ss_pred cccccCCCCCCCcchhhccchhhcccccccccceeee-ccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccC
Confidence 221110 011 221 122333333 467788999999999999999999999999998878999999
Q ss_pred EcCCCCEEEEeeCCCcEEEEeCCCC
Q psy6442 173 FSPDGELYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 173 ~spd~~~laS~s~d~~v~iwd~~~~ 197 (231)
=+|--.+|||.+-|..||||...+.
T Consensus 444 pHP~~PvLAsSGid~DVKIWTP~~~ 468 (559)
T KOG1334|consen 444 PHPHLPVLASSGIDHDVKIWTPLTA 468 (559)
T ss_pred CCCCCchhhccCCccceeeecCCcc
Confidence 9999999999999999999997443
No 227
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.01 E-value=5.7e-07 Score=74.28 Aligned_cols=199 Identities=17% Similarity=0.190 Sum_probs=129.7
Q ss_pred CCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEe---------CCCCEEEEeCCCCCc
Q psy6442 4 DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCA---------EDKTVRLWDVSASAE 74 (231)
Q Consensus 4 d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s---------~D~ti~iwd~~~~~~ 74 (231)
.++|.+.|..+++.+.++.....+-. + ++||++.+. ++.+ .+..|.+||..+.+.
T Consensus 26 ~~~v~ViD~~~~~v~g~i~~G~~P~~-~-~spDg~~ly--------------va~~~~~R~~~G~~~d~V~v~D~~t~~~ 89 (352)
T TIGR02658 26 TTQVYTIDGEAGRVLGMTDGGFLPNP-V-VASDGSFFA--------------HASTVYSRIARGKRTDYVEVIDPQTHLP 89 (352)
T ss_pred CceEEEEECCCCEEEEEEEccCCCce-e-ECCCCCEEE--------------EEeccccccccCCCCCEEEEEECccCcE
Confidence 48899999999999998875444332 3 788865542 3333 478999999999999
Q ss_pred eEEEEeCCcce--------eEEEccCCCEEEEEc---CCeEEEEECCCcceEEeeeccceeE------------------
Q psy6442 75 VQKLEFGAVPN--------SLEISRDGTTITVTH---GSCVTFLDANSLELIKEHKVPAQVH------------------ 125 (231)
Q Consensus 75 ~~~~~~~~~~~--------~v~~~~~~~~~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~------------------ 125 (231)
+..+..+..+. ..+++||++.+++.. +..+.++|+...+.+.++..+....
T Consensus 90 ~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~ 169 (352)
T TIGR02658 90 IADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSL 169 (352)
T ss_pred EeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCce
Confidence 99998765544 889999999998764 5789999998887776654332100
Q ss_pred --------------EEEE-E-------ecC-----CCCEEEEecCCCeEEEEeCCCc-----ceeeeccC-------CCC
Q psy6442 126 --------------SASL-L-------LNS-----ERPIFVCGGEDLKMYKFDYSTG-----AEIESFKG-------HFG 166 (231)
Q Consensus 126 --------------~~~~-~-------~~~-----~~~~~~~g~~d~~i~~~d~~~~-----~~~~~~~~-------h~~ 166 (231)
...+ . ..| ++..+....+ ++|+..|+... .....+.. ..+
T Consensus 170 ~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~ 248 (352)
T TIGR02658 170 AKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPG 248 (352)
T ss_pred EEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCC
Confidence 0000 0 011 3444333333 78888885322 22222211 112
Q ss_pred CeeEEEEcCCCCEEEEee----------CCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCcccc
Q psy6442 167 PIHCVKFSPDGELYASGS----------EDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGH 221 (231)
Q Consensus 167 ~V~~v~~spd~~~laS~s----------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (231)
.+--++++|+++.+.... ..+.|.++|..+++....+.. +.-+-.|++..+|+
T Consensus 249 g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v--G~~~~~iavS~Dgk 311 (352)
T TIGR02658 249 GWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL--GHEIDSINVSQDAK 311 (352)
T ss_pred cceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC--CCceeeEEECCCCC
Confidence 222389999987655532 225799999999999887764 55566677777776
No 228
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.01 E-value=2.6e-07 Score=79.15 Aligned_cols=178 Identities=15% Similarity=0.181 Sum_probs=101.6
Q ss_pred CCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeC--CCCCceEEEE-eC
Q psy6442 5 GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDV--SASAEVQKLE-FG 81 (231)
Q Consensus 5 ~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~--~~~~~~~~~~-~~ 81 (231)
.++++|+..+|+... +....+.+....|+|||+.+ +++.+.|+...||.+ ..+.. ..+. ..
T Consensus 220 ~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~l--------------a~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~ 283 (427)
T PRK02889 220 PVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRTL--------------AVALSRDGNSQIYTVNADGSGL-RRLTQSS 283 (427)
T ss_pred cEEEEEECCCCCEEE-eecCCCCccceEECCCCCEE--------------EEEEccCCCceEEEEECCCCCc-EECCCCC
Confidence 347788887776533 33334555678888886553 345667787777754 44432 3332 22
Q ss_pred CcceeEEEccCCCEEEE-Ec-CCeEEE--EECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCC---eEEEEeCCC
Q psy6442 82 AVPNSLEISRDGTTITV-TH-GSCVTF--LDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDL---KMYKFDYST 154 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~-~~-~~~i~~--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~---~i~~~d~~~ 154 (231)
.......|+||++.++. +. ++...+ ++.......+. ...... .....++|+++.++..+.++ .|++||+.+
T Consensus 284 ~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~l-t~~g~~-~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~ 361 (427)
T PRK02889 284 GIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRV-TFTGSY-NTSPRISPDGKLLAYISRVGGAFKLYVQDLAT 361 (427)
T ss_pred CCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEE-ecCCCC-cCceEECCCCCEEEEEEccCCcEEEEEEECCC
Confidence 34567789999997664 32 233444 44444332221 111111 11233588998887665443 699999987
Q ss_pred cceeeeccCCCCCeeEEEEcCCCCEEEEeeCCC-c--EEEEeCCCCCeeeee
Q psy6442 155 GAEIESFKGHFGPIHCVKFSPDGELYASGSEDG-T--LRLWQTNVGKTYGLW 203 (231)
Q Consensus 155 ~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~-~--v~iwd~~~~~~~~~~ 203 (231)
++.. .+..+ .......|+|||++|+.++.++ . +.+-++ .|+.....
T Consensus 362 g~~~-~lt~~-~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~g~~~~~l 410 (427)
T PRK02889 362 GQVT-ALTDT-TRDESPSFAPNGRYILYATQQGGRSVLAAVSS-DGRIKQRL 410 (427)
T ss_pred CCeE-EccCC-CCccCceECCCCCEEEEEEecCCCEEEEEEEC-CCCceEEe
Confidence 7643 33222 2346789999999888777544 2 444455 45444433
No 229
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.98 E-value=1.6e-09 Score=60.33 Aligned_cols=39 Identities=33% Similarity=0.635 Sum_probs=35.4
Q ss_pred CCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEe
Q psy6442 15 GDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWD 68 (231)
Q Consensus 15 g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd 68 (231)
|+++.+|++|++.|.+++|+|+ +..|+|++.|++|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~---------------~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPD---------------GNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETT---------------SSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecc---------------cccceeeCCCCEEEEEC
Confidence 5788999999999999999997 45689999999999997
No 230
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.97 E-value=2.7e-07 Score=78.63 Aligned_cols=171 Identities=18% Similarity=0.199 Sum_probs=103.7
Q ss_pred CCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCC--CEEEEeCCCCCceEEEEeCC
Q psy6442 5 GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDK--TVRLWDVSASAEVQKLEFGA 82 (231)
Q Consensus 5 ~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~--ti~iwd~~~~~~~~~~~~~~ 82 (231)
.++++|+..+|+... +..+.+.+.+..|+|+++.++ ++.+.++ .|.+||+.++..........
T Consensus 214 ~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg~~l~--------------~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 278 (417)
T TIGR02800 214 PEIYVQDLATGQREK-VASFPGMNGAPAFSPDGSKLA--------------VSLSKDGNPDIYVMDLDGKQLTRLTNGPG 278 (417)
T ss_pred cEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEE--------------EEECCCCCccEEEEECCCCCEEECCCCCC
Confidence 467888887776543 344566677788999876542 3444443 58888988765443333333
Q ss_pred cceeEEEccCCCEEEEE-c-C--CeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCC---eEEEEeCCCc
Q psy6442 83 VPNSLEISRDGTTITVT-H-G--SCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDL---KMYKFDYSTG 155 (231)
Q Consensus 83 ~~~~v~~~~~~~~~~~~-~-~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~---~i~~~d~~~~ 155 (231)
......|+|+++.++.. . . ..+.+++....+..+......... ...+++++..++..+.+. +|+++|+.++
T Consensus 279 ~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~~~~~~~--~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~ 356 (417)
T TIGR02800 279 IDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTFRGGYNA--SPSWSPDGDLIAFVHREGGGFNIAVMDLDGG 356 (417)
T ss_pred CCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCcc--CeEECCCCCEEEEEEccCCceEEEEEeCCCC
Confidence 34567899999876543 2 2 257777876554332221111222 233478888888776654 7899998775
Q ss_pred ceeeeccCCCCCeeEEEEcCCCCEEEEeeCCC---cEEEEeC
Q psy6442 156 AEIESFKGHFGPIHCVKFSPDGELYASGSEDG---TLRLWQT 194 (231)
Q Consensus 156 ~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~---~v~iwd~ 194 (231)
.. ..+... ......+|+||+++|+..+.++ .+.+.+.
T Consensus 357 ~~-~~l~~~-~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~ 396 (417)
T TIGR02800 357 GE-RVLTDT-GLDESPSFAPNGRMILYATTRGGRGVLGLVST 396 (417)
T ss_pred Ce-EEccCC-CCCCCceECCCCCEEEEEEeCCCcEEEEEEEC
Confidence 43 223222 2234568999999887776654 3445554
No 231
>KOG4497|consensus
Probab=98.96 E-value=3.2e-09 Score=84.27 Aligned_cols=175 Identities=15% Similarity=0.242 Sum_probs=117.2
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF 80 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~ 80 (231)
|..|+.|.+|+...-+.-+.....+..+.++.|+|+|+.+ |.+...|-.|-+|.+.+.++...-.-
T Consensus 67 ~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhi--------------L~tseF~lriTVWSL~t~~~~~~~~p 132 (447)
T KOG4497|consen 67 AYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHI--------------LLTSEFDLRITVWSLNTQKGYLLPHP 132 (447)
T ss_pred eeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceE--------------eeeecceeEEEEEEeccceeEEeccc
Confidence 4578999999999889999888888999999999998664 67888899999999988776543333
Q ss_pred CCcceeEEEccCCCEEEEEcC-CeEEEEEC---CCcceEEeeeccc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc
Q psy6442 81 GAVPNSLEISRDGTTITVTHG-SCVTFLDA---NSLELIKEHKVPA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG 155 (231)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~~~~-~~i~~~d~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~ 155 (231)
+..+..++++||+++.++..- .+..++++ .....++.++.+. ....+. ++|++..++. ||.-..
T Consensus 133 K~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~Dltgie--WsPdg~~laV---------wd~~Le 201 (447)
T KOG4497|consen 133 KTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIE--WSPDGNWLAV---------WDNVLE 201 (447)
T ss_pred ccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCce--ECCCCcEEEE---------ecchhh
Confidence 456788999999998765422 22222221 2223344444432 222223 3677665554 442211
Q ss_pred ceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeee
Q psy6442 156 AEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYG 201 (231)
Q Consensus 156 ~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~ 201 (231)
..+..++ ..-.+..++|+|-+++|+.|+.|+.+||-|--+-|++.
T Consensus 202 ykv~aYe-~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~ 246 (447)
T KOG4497|consen 202 YKVYAYE-RGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFG 246 (447)
T ss_pred heeeeee-eccceeEEEeccccceEEeeccchhhhhhceeeeeehh
Confidence 1111111 11347789999999999999999999998866655553
No 232
>KOG2321|consensus
Probab=98.90 E-value=1e-07 Score=80.72 Aligned_cols=162 Identities=17% Similarity=0.304 Sum_probs=107.2
Q ss_pred cccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCce---------------------------
Q psy6442 23 GHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEV--------------------------- 75 (231)
Q Consensus 23 gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~--------------------------- 75 (231)
+|...-..+..+|||+++ ++||-+--.||+||+..-..-
T Consensus 49 e~p~ast~ik~s~DGqY~--------------lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~ 114 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYL--------------LATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQN 114 (703)
T ss_pred CCccccceeEecCCCcEE--------------EEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeec
Confidence 466677788889998875 667777778888887432110
Q ss_pred -EEEEe------------CCcceeEEEccCCC-EEEEEcCCeEEEEECCCcceEEeeecc-ceeEEEEEEecCCCCEEEE
Q psy6442 76 -QKLEF------------GAVPNSLEISRDGT-TITVTHGSCVTFLDANSLELIKEHKVP-AQVHSASLLLNSERPIFVC 140 (231)
Q Consensus 76 -~~~~~------------~~~~~~v~~~~~~~-~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 140 (231)
+++++ +..-.+++++.... .++++.+..+.-+++..+..+.++... ..++.+.+ ++.+.++++
T Consensus 115 DR~IefHak~G~hy~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~i--n~~hgLla~ 192 (703)
T KOG2321|consen 115 DRTIEFHAKYGRHYRTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSI--NEEHGLLAC 192 (703)
T ss_pred CceeeehhhcCeeeeeecCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeee--cCccceEEe
Confidence 11111 11112233322222 223344455555666666666666554 34554444 788889999
Q ss_pred ecCCCeEEEEeCCCcceeeecc------CCCC-----CeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCee
Q psy6442 141 GGEDLKMYKFDYSTGAEIESFK------GHFG-----PIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 141 g~~d~~i~~~d~~~~~~~~~~~------~h~~-----~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~ 200 (231)
|+.++.+..||.+..+...++. .|.+ .|++++|+.+|-.++.|..+|.|.|||+++.++.
T Consensus 193 Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl 263 (703)
T KOG2321|consen 193 GTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPL 263 (703)
T ss_pred cccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCce
Confidence 9999999999998766554432 2333 4999999999999999999999999999988875
No 233
>KOG1240|consensus
Probab=98.90 E-value=1e-07 Score=86.88 Aligned_cols=188 Identities=18% Similarity=0.172 Sum_probs=119.2
Q ss_pred CCcCCCceeeecc-----CC--CeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCC-
Q psy6442 1 MCVDGKPMLRQGD-----TG--DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSAS- 72 (231)
Q Consensus 1 ~~~d~~~~~~~~~-----~g--~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~- 72 (231)
||.||+|++|+.. .| +...+|.--..++.++..-+ +++.+|.++.||.|++.++..-
T Consensus 1067 gS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~---------------~~~~~Av~t~DG~v~~~~id~~~ 1131 (1431)
T KOG1240|consen 1067 GSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCG---------------NGDQFAVSTKDGSVRVLRIDHYN 1131 (1431)
T ss_pred ecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEecc---------------CCCeEEEEcCCCeEEEEEccccc
Confidence 6899999999963 11 22222332233444443333 4667888899999999988651
Q ss_pred -Cc-----eEEEEe--CCcceeE-EEccC-C--CEEEEEcCCeEEEEECCCcceEEeeeccc---eeEEEEEEecCCCCE
Q psy6442 73 -AE-----VQKLEF--GAVPNSL-EISRD-G--TTITVTHGSCVTFLDANSLELIKEHKVPA---QVHSASLLLNSERPI 137 (231)
Q Consensus 73 -~~-----~~~~~~--~~~~~~v-~~~~~-~--~~~~~~~~~~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 137 (231)
+. .+.... .+.+.++ ++... + ..+++...+.+..||.+......+.+.+. -+.. +..++.+..
T Consensus 1132 ~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTS--i~idp~~~W 1209 (1431)
T KOG1240|consen 1132 VSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTS--IVIDPWCNW 1209 (1431)
T ss_pred cccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeE--EEecCCceE
Confidence 11 111111 1222222 22211 2 23445667889999998877766654432 2333 344888889
Q ss_pred EEEecCCCeEEEEeCCCcceeeecc-CCCCCeeEEEEcCCC---CEEEEe-e-CCCcEEEEeCCCCCeee-eeec
Q psy6442 138 FVCGGEDLKMYKFDYSTGAEIESFK-GHFGPIHCVKFSPDG---ELYASG-S-EDGTLRLWQTNVGKTYG-LWKC 205 (231)
Q Consensus 138 ~~~g~~d~~i~~~d~~~~~~~~~~~-~h~~~V~~v~~spd~---~~laS~-s-~d~~v~iwd~~~~~~~~-~~~~ 205 (231)
++.|...|.+-+||++-+.++...+ .+..+++.|...|-. ...+++ + ..+.|.+|+..+|.-.. +|..
T Consensus 1210 lviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s 1284 (1431)
T KOG1240|consen 1210 LVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWAS 1284 (1431)
T ss_pred EEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcceEEEEcC
Confidence 9999999999999999888876653 355889999888853 344444 3 68889999999886433 4544
No 234
>KOG1310|consensus
Probab=98.90 E-value=4.3e-08 Score=82.69 Aligned_cols=186 Identities=19% Similarity=0.294 Sum_probs=122.9
Q ss_pred CCcCCCceeeeccCCCeEeee-ecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCc-----
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTF-EGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAE----- 74 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l-~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~----- 74 (231)
||+|-.+.+|+...-++++.. .||.+.|+++.|-|.. ++..++||+.|+.|+++|+.+.+.
T Consensus 68 GSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~t-------------nnriv~sgAgDk~i~lfdl~~~~~~~~d~ 134 (758)
T KOG1310|consen 68 GSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYT-------------NNRIVLSGAGDKLIKLFDLDSSKEGGMDH 134 (758)
T ss_pred cCCcceEEeecchhcceeeeeecccccceeEEeeeccC-------------CCeEEEeccCcceEEEEeccccccccccc
Confidence 578889999999988887776 5999999999998863 467799999999999999975221
Q ss_pred -----eEEE-EeCCcceeEEEccCCCEE--EEEcCCeEEEEECCCcceEEeee-c--------cceeEEEEEEecCC-CC
Q psy6442 75 -----VQKL-EFGAVPNSLEISRDGTTI--TVTHGSCVTFLDANSLELIKEHK-V--------PAQVHSASLLLNSE-RP 136 (231)
Q Consensus 75 -----~~~~-~~~~~~~~v~~~~~~~~~--~~~~~~~i~~~d~~~~~~~~~~~-~--------~~~~~~~~~~~~~~-~~ 136 (231)
.... .+...+..++..|++... .++.+++++.+|++....-.... . +.-+...++..+|. ..
T Consensus 135 ~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~lielk~ltisp~rp~ 214 (758)
T KOG1310|consen 135 GMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIELKCLTISPSRPY 214 (758)
T ss_pred CccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhheeeeeeecCCCCc
Confidence 1111 123567788888988543 45678999999988643322111 0 11122223333554 44
Q ss_pred EEEEecCCCeEEEEeCCC--------cc----------eeeec-cCCC----C-------CeeEEEEcCCCC-EEEEeeC
Q psy6442 137 IFVCGGEDLKMYKFDYST--------GA----------EIESF-KGHF----G-------PIHCVKFSPDGE-LYASGSE 185 (231)
Q Consensus 137 ~~~~g~~d~~i~~~d~~~--------~~----------~~~~~-~~h~----~-------~V~~v~~spd~~-~laS~s~ 185 (231)
+++.|+.+.-.++||.+. +. .+..| .+|- + -++-+.|+|+|. +|++-+.
T Consensus 215 ~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vtfnpNGtElLvs~~g 294 (758)
T KOG1310|consen 215 YLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVTFNPNGTELLVSWGG 294 (758)
T ss_pred eEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEEECCCCcEEEEeeCC
Confidence 688899998888998311 11 01111 2332 1 145688999986 5555554
Q ss_pred CCcEEEEeCCCCCee
Q psy6442 186 DGTLRLWQTNVGKTY 200 (231)
Q Consensus 186 d~~v~iwd~~~~~~~ 200 (231)
..|.++|+..++..
T Consensus 295 -EhVYlfdvn~~~~~ 308 (758)
T KOG1310|consen 295 -EHVYLFDVNEDKSP 308 (758)
T ss_pred -eEEEEEeecCCCCc
Confidence 45999999888754
No 235
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.88 E-value=1.2e-06 Score=75.04 Aligned_cols=173 Identities=16% Similarity=0.149 Sum_probs=96.7
Q ss_pred CceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCC--CEEEEeCCCCCceEEEEeCCc
Q psy6442 6 KPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDK--TVRLWDVSASAEVQKLEFGAV 83 (231)
Q Consensus 6 ~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~--ti~iwd~~~~~~~~~~~~~~~ 83 (231)
++++++..+|+... +....+.+....|+|+|+.++ ++.+.++ .|.+||+.+++..........
T Consensus 224 ~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~la--------------~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~ 288 (430)
T PRK00178 224 RIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKLA--------------FVLSKDGNPEIYVMDLASRQLSRVTNHPAI 288 (430)
T ss_pred EEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEEE--------------EEEccCCCceEEEEECCCCCeEEcccCCCC
Confidence 45566666664322 222233444567777765442 3444444 577789988765433223334
Q ss_pred ceeEEEccCCCEEEEEcC----CeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCC---CeEEEEeCCCcc
Q psy6442 84 PNSLEISRDGTTITVTHG----SCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGED---LKMYKFDYSTGA 156 (231)
Q Consensus 84 ~~~v~~~~~~~~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d---~~i~~~d~~~~~ 156 (231)
.....|+||+..++...+ ..+..++..+.+..+.. ...... ....++|++..++..... ..|+++|+.+++
T Consensus 289 ~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt-~~~~~~-~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~ 366 (430)
T PRK00178 289 DTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVT-FVGNYN-ARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGS 366 (430)
T ss_pred cCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee-cCCCCc-cceEECCCCCEEEEEEccCCceEEEEEECCCCC
Confidence 566789999997665432 25667777655433221 111111 112347888887765432 358889988765
Q ss_pred eeeeccCCCCCeeEEEEcCCCCEEEEeeCC-C--cEEEEeCCCC
Q psy6442 157 EIESFKGHFGPIHCVKFSPDGELYASGSED-G--TLRLWQTNVG 197 (231)
Q Consensus 157 ~~~~~~~h~~~V~~v~~spd~~~laS~s~d-~--~v~iwd~~~~ 197 (231)
.. .+. +........|+|||++++..+.+ + .|.+.++..+
T Consensus 367 ~~-~lt-~~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g~ 408 (430)
T PRK00178 367 VR-ILT-DTSLDESPSVAPNGTMLIYATRQQGRGVLMLVSINGR 408 (430)
T ss_pred EE-Ecc-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECCCC
Confidence 42 222 11122356899999988776643 3 3666677433
No 236
>KOG4227|consensus
Probab=98.87 E-value=1.3e-07 Score=76.92 Aligned_cols=196 Identities=16% Similarity=0.118 Sum_probs=131.3
Q ss_pred CCcCCCceeeecc------CCCeEeeee-cccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCC
Q psy6442 1 MCVDGKPMLRQGD------TGDWIGTFE-GHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASA 73 (231)
Q Consensus 1 ~~~d~~~~~~~~~------~g~~i~~l~-gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~ 73 (231)
|+.|-.++||..+ +-+.|.... .|...|+++.|+.. +..|++++.+++|..-|+.+.+
T Consensus 74 GGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~---------------N~~~~SG~~~~~VI~HDiEt~q 138 (609)
T KOG4227|consen 74 GGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLE---------------NRFLYSGERWGTVIKHDIETKQ 138 (609)
T ss_pred cCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccC---------------CeeEecCCCcceeEeeecccce
Confidence 5788889999974 334555332 35689999999875 5678999999999999999988
Q ss_pred ceEEEEeCC---cceeEEEccCCCEEEE-EcCCeEEEEECCCcc-eEEe---eeccceeEEEEEEecCCCC-EEEEecCC
Q psy6442 74 EVQKLEFGA---VPNSLEISRDGTTITV-THGSCVTFLDANSLE-LIKE---HKVPAQVHSASLLLNSERP-IFVCGGED 144 (231)
Q Consensus 74 ~~~~~~~~~---~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~-~~~~g~~d 144 (231)
.+....... .++.+..+|..+.+++ +.++.+.+||.+... .... ...+.... +..++|..+ ++++.+..
T Consensus 139 si~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~--t~~F~P~~P~Li~~~~~~ 216 (609)
T KOG4227|consen 139 SIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFY--TAEFHPETPALILVNSET 216 (609)
T ss_pred eeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccce--eeeecCCCceeEEecccc
Confidence 776665543 7889999998887665 567889999987644 2221 22222222 333466655 45667777
Q ss_pred CeEEEEeCCCcce-eee------ccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCe-eeeeeccCCcccCC
Q psy6442 145 LKMYKFDYSTGAE-IES------FKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKT-YGLWKCIEGGLNNS 213 (231)
Q Consensus 145 ~~i~~~d~~~~~~-~~~------~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~-~~~~~~~~~~~~~~ 213 (231)
+-+-+||.+..+. +.. ++.......++.|+|.|..|.+--.-..--+||+.+.+- +-...--.+++||+
T Consensus 217 ~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~GY~N~ 293 (609)
T KOG4227|consen 217 GGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPNGYCNI 293 (609)
T ss_pred CCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCCcceee
Confidence 7788999764321 111 222223446789999999999888777778889877443 22333223455554
No 237
>KOG1524|consensus
Probab=98.86 E-value=5.3e-08 Score=81.93 Aligned_cols=142 Identities=15% Similarity=0.226 Sum_probs=95.8
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCCEEE-EEcCCeEEEEECCCcceEEeeeccceeEEEEE
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTIT-VTHGSCVTFLDANSLELIKEHKVPAQVHSASL 129 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 129 (231)
...++.++.||.+.|-+-. ++..+.+. +...+.+-.|+|||.-++ ++.|+.|++|....+-.........++.+..|
T Consensus 75 ~d~~~i~s~DGkf~il~k~-~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W 153 (737)
T KOG1524|consen 75 SDTLLICSNDGRFVILNKS-ARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARW 153 (737)
T ss_pred cceEEEEcCCceEEEeccc-chhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEE
Confidence 3568888899998887643 33333332 445677778999998654 56789999998654321111122335555555
Q ss_pred EecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCC
Q psy6442 130 LLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 130 ~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~ 197 (231)
.|+..-++.+. .+.+.+=.+.....+-..++|.+-|.++.|+|..++++||++|-..+|||..-.
T Consensus 154 --~p~S~~vl~c~-g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~ 218 (737)
T KOG1524|consen 154 --APNSNSIVFCQ-GGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGA 218 (737)
T ss_pred --CCCCCceEEec-CCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccCc
Confidence 55544444432 334444445544555667899999999999999999999999999999997443
No 238
>KOG1963|consensus
Probab=98.84 E-value=8.3e-07 Score=78.43 Aligned_cols=138 Identities=15% Similarity=0.186 Sum_probs=98.6
Q ss_pred EEEEeCCCCEEEEeCCCCCce-----EEEEeCCcceeEEEccCCCEEEEEc-CCeEEEEECCC--cc--eEEe-eeccce
Q psy6442 55 LISCAEDKTVRLWDVSASAEV-----QKLEFGAVPNSLEISRDGTTITVTH-GSCVTFLDANS--LE--LIKE-HKVPAQ 123 (231)
Q Consensus 55 l~s~s~D~ti~iwd~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~-~~~i~~~d~~~--~~--~~~~-~~~~~~ 123 (231)
+...--+..+.+|...++... ...++.-..++++++|.++.++++. +|.|.+|.--. .. ..+. +-...+
T Consensus 174 ~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~ 253 (792)
T KOG1963|consen 174 FKGIVHMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDE 253 (792)
T ss_pred EEEEEEeeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccc
Confidence 333344556778887764411 1112334478899999999988764 68899886322 11 1122 233446
Q ss_pred eEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCC
Q psy6442 124 VHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 124 ~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~ 195 (231)
+....+ +++|..+++|+..+.+-+|.+.+++ .+-++.-.++|..+.+|||+.+.+....|+.|.+-...
T Consensus 254 V~~L~f--S~~G~~LlSGG~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~ 322 (792)
T KOG1963|consen 254 VNSLSF--SSDGAYLLSGGREGVLVLWQLETGK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKAS 322 (792)
T ss_pred cceeEE--ecCCceEeecccceEEEEEeecCCC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEecc
Confidence 666555 7889999999999999999998877 33445667899999999999999999999999998863
No 239
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.83 E-value=2.4e-06 Score=73.63 Aligned_cols=176 Identities=13% Similarity=0.111 Sum_probs=96.4
Q ss_pred CceeeeccCCCe--EeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCC--EEEEeCCCCCceEEEEeC
Q psy6442 6 KPMLRQGDTGDW--IGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKT--VRLWDVSASAEVQKLEFG 81 (231)
Q Consensus 6 ~~~~~~~~~g~~--i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~t--i~iwd~~~~~~~~~~~~~ 81 (231)
++++++..+|+. +..+.+ ......|+|||+.+ +++.+.++. |.++|+.+++........
T Consensus 243 ~L~~~dl~tg~~~~lt~~~g---~~~~~~wSPDG~~L--------------a~~~~~~g~~~Iy~~dl~tg~~~~lt~~~ 305 (448)
T PRK04792 243 EIFVQDIYTQVREKVTSFPG---INGAPRFSPDGKKL--------------ALVLSKDGQPEIYVVDIATKALTRITRHR 305 (448)
T ss_pred EEEEEECCCCCeEEecCCCC---CcCCeeECCCCCEE--------------EEEEeCCCCeEEEEEECCCCCeEECccCC
Confidence 355566655553 222222 23356677776543 234555665 667788777644333333
Q ss_pred CcceeEEEccCCCEEEEEcC----CeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCC---CeEEEEeCCC
Q psy6442 82 AVPNSLEISRDGTTITVTHG----SCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGED---LKMYKFDYST 154 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d---~~i~~~d~~~ 154 (231)
......+|+||++.++...+ ..+..+|..+.+..+.......... ..++|++..++..+.+ ..|+++|+.+
T Consensus 306 ~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~~~~--~~~SpDG~~l~~~~~~~g~~~I~~~dl~~ 383 (448)
T PRK04792 306 AIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGEQNLG--GSITPDGRSMIMVNRTNGKFNIARQDLET 383 (448)
T ss_pred CCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCCCCCcC--eeECCCCCEEEEEEecCCceEEEEEECCC
Confidence 44567899999997765432 3566677765544332111111111 2347888877765442 3577788877
Q ss_pred cceeeeccCCCCCeeEEEEcCCCCEEEEeeC-CCc--EEEEeCCCCCeeeee
Q psy6442 155 GAEIESFKGHFGPIHCVKFSPDGELYASGSE-DGT--LRLWQTNVGKTYGLW 203 (231)
Q Consensus 155 ~~~~~~~~~h~~~V~~v~~spd~~~laS~s~-d~~--v~iwd~~~~~~~~~~ 203 (231)
+... .+.... ......|+|||++|+..+. ++. +.+++. +|+.....
T Consensus 384 g~~~-~lt~~~-~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l 432 (448)
T PRK04792 384 GAMQ-VLTSTR-LDESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRFKARL 432 (448)
T ss_pred CCeE-EccCCC-CCCCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEEC
Confidence 6543 222221 1224479999997766554 333 666776 44444333
No 240
>KOG2315|consensus
Probab=98.82 E-value=6.1e-07 Score=75.85 Aligned_cols=127 Identities=20% Similarity=0.302 Sum_probs=89.0
Q ss_pred CEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcC---CeEEEEECCCcceEEeeeccc-eeEEEEEEecCCCCEE
Q psy6442 63 TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHG---SCVTFLDANSLELIKEHKVPA-QVHSASLLLNSERPIF 138 (231)
Q Consensus 63 ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 138 (231)
++.+.++...++.-.+.-.++|.++.|+|+++.+.+.++ .++.++|.+-. ++ +..+. +-+. +.++|.+.++
T Consensus 252 ~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~-~v--~df~egpRN~--~~fnp~g~ii 326 (566)
T KOG2315|consen 252 TLYLLATQGESVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGK-PV--FDFPEGPRNT--AFFNPHGNII 326 (566)
T ss_pred eEEEEEecCceEEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCCCC-Ee--EeCCCCCccc--eEECCCCCEE
Confidence 566777664444444444578999999999998776544 58888887543 22 22222 2233 3348888887
Q ss_pred EEecC---CCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeC------CCcEEEEeCCC
Q psy6442 139 VCGGE---DLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSE------DGTLRLWQTNV 196 (231)
Q Consensus 139 ~~g~~---d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~------d~~v~iwd~~~ 196 (231)
+.++- .|.|-+||..+.+++..+..-.. +-..|+|||++|+++.. |+.++||++.-
T Consensus 327 ~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~t--t~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG 391 (566)
T KOG2315|consen 327 LLAGFGNLPGDMEVWDVPNRKLIAKFKAANT--TVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTG 391 (566)
T ss_pred EEeecCCCCCceEEEeccchhhccccccCCc--eEEEEcCCCcEEEEEeccccEEecCCeEEEEecC
Confidence 76554 58999999999888888875443 34689999999988863 78899999843
No 241
>KOG1538|consensus
Probab=98.81 E-value=5.2e-08 Score=83.95 Aligned_cols=164 Identities=16% Similarity=0.250 Sum_probs=109.7
Q ss_pred cEEEEEECCCCceeEecccccc--------------------------ccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe
Q psy6442 27 CVWGVDINKDASKAASGAADFQ--------------------------AKNNTRLISCAEDKTVRLWDVSASAEVQKLEF 80 (231)
Q Consensus 27 ~V~~~~~~~~~~~~~s~~~d~~--------------------------~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~ 80 (231)
.|+.++|.|||..+.-++.+.. .++|++++||+.|+.|.+|...-.. +....+
T Consensus 14 ci~d~afkPDGsqL~lAAg~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG-~LkYSH 92 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEG-ILKYSH 92 (1081)
T ss_pred chheeEECCCCceEEEecCCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccc-eeeecc
Confidence 8999999999977665544311 1377788888888888888654322 223345
Q ss_pred CCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcc---e
Q psy6442 81 GAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA---E 157 (231)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~---~ 157 (231)
...+-++.|.|-...++...-+...+|......+ ..++....+ .+.++..+|+.++.|..+|+|-+-+- +++ .
T Consensus 93 ~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V-~K~kss~R~--~~CsWtnDGqylalG~~nGTIsiRNk-~gEek~~ 168 (1081)
T KOG1538|consen 93 NDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSV-SKHKSSSRI--ICCSWTNDGQYLALGMFNGTISIRNK-NGEEKVK 168 (1081)
T ss_pred CCeeeEeecCchHHHhhhcchhhccccChhhhhH-HhhhhheeE--EEeeecCCCcEEEEeccCceEEeecC-CCCcceE
Confidence 6677777777766655444334455565433222 222222333 44445899999999999999887653 333 2
Q ss_pred eeeccCCCCCeeEEEEcCCC-----CEEEEeeCCCcEEEEeCC
Q psy6442 158 IESFKGHFGPIHCVKFSPDG-----ELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 158 ~~~~~~h~~~V~~v~~spd~-----~~laS~s~d~~v~iwd~~ 195 (231)
+...-|...+|++++|+|.. ..++......++.++.+.
T Consensus 169 I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls 211 (1081)
T KOG1538|consen 169 IERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS 211 (1081)
T ss_pred EeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec
Confidence 44445678999999999963 488888999999999873
No 242
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.81 E-value=7.8e-06 Score=67.64 Aligned_cols=199 Identities=15% Similarity=0.132 Sum_probs=120.1
Q ss_pred cCCCceeeeccCCCeEeeeec----c---cccEEEEEECCCCceeEecccc------------------ccccCCCEEEE
Q psy6442 3 VDGKPMLRQGDTGDWIGTFEG----H---KGCVWGVDINKDASKAASGAAD------------------FQAKNNTRLIS 57 (231)
Q Consensus 3 ~d~~~~~~~~~~g~~i~~l~g----H---~~~V~~~~~~~~~~~~~s~~~d------------------~~~~~~~~l~s 57 (231)
.++.|.++|..+++.++.+.- + ...-..+.++|||+.+....++ ..+.++..++.
T Consensus 75 ~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~ 154 (352)
T TIGR02658 75 RTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFP 154 (352)
T ss_pred CCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEE
Confidence 467899999999999988763 1 1123467889999887754432 01123344444
Q ss_pred Ee--------CCCCEEEEeCCC-CC-ceEEEEe--C------CcceeEEEcc-CCCEEEEEcCCeEEEEECCCcc-----
Q psy6442 58 CA--------EDKTVRLWDVSA-SA-EVQKLEF--G------AVPNSLEISR-DGTTITVTHGSCVTFLDANSLE----- 113 (231)
Q Consensus 58 ~s--------~D~ti~iwd~~~-~~-~~~~~~~--~------~~~~~v~~~~-~~~~~~~~~~~~i~~~d~~~~~----- 113 (231)
.+ .||+.....+.+ ++ ....... . ..+ .+.+ ++..++++..+.+...|.....
T Consensus 155 t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP---~~~~~dg~~~~vs~eG~V~~id~~~~~~~~~~ 231 (352)
T TIGR02658 155 TANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHP---AYSNKSGRLVWPTYTGKIFQIDLSSGDAKFLP 231 (352)
T ss_pred ecCCccEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCC---ceEcCCCcEEEEecCCeEEEEecCCCcceecc
Confidence 42 333333222211 11 1111111 1 111 2344 8888888888999999954322
Q ss_pred eEEeeec--------cceeEEEEEEecCCCCEEEE-ec---------CCCeEEEEeCCCcceeeeccCCCCCeeEEEEcC
Q psy6442 114 LIKEHKV--------PAQVHSASLLLNSERPIFVC-GG---------EDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSP 175 (231)
Q Consensus 114 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~-g~---------~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~sp 175 (231)
.+..... |..... +..++++..+.. .. ...+|+++|..+++.+..+.- ...+..++++|
T Consensus 232 ~~~~~~~~~~~~~wrP~g~q~--ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v-G~~~~~iavS~ 308 (352)
T TIGR02658 232 AIEAFTEAEKADGWRPGGWQQ--VAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL-GHEIDSINVSQ 308 (352)
T ss_pred eeeeccccccccccCCCccee--EEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC-CCceeeEEECC
Confidence 2222111 111222 334666666554 21 124799999999998887752 34789999999
Q ss_pred CCC-EEEEee-CCCcEEEEeCCCCCeeeeeeccC
Q psy6442 176 DGE-LYASGS-EDGTLRLWQTNVGKTYGLWKCIE 207 (231)
Q Consensus 176 d~~-~laS~s-~d~~v~iwd~~~~~~~~~~~~~~ 207 (231)
|++ +|.... .++.|.+.|+.+++.......+.
T Consensus 309 Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i~~vg 342 (352)
T TIGR02658 309 DAKPLLYALSTGDKTLYIFDAETGKELSSVNQLG 342 (352)
T ss_pred CCCeEEEEeCCCCCcEEEEECcCCeEEeeeccCC
Confidence 998 776565 68889999999999887764433
No 243
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.79 E-value=6.2e-06 Score=70.35 Aligned_cols=191 Identities=14% Similarity=0.093 Sum_probs=113.4
Q ss_pred ceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeC---CCCEEEEeCCCCCceEEEEeCCc
Q psy6442 7 PMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAE---DKTVRLWDVSASAEVQKLEFGAV 83 (231)
Q Consensus 7 ~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~---D~ti~iwd~~~~~~~~~~~~~~~ 83 (231)
+.+-|. +|...+.+... +.+..-.|+|+|+.+ ++..+. +..|.++|+.+++.......+..
T Consensus 171 l~~~d~-dg~~~~~~~~~-~~~~~p~wSpDG~~~--------------i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~ 234 (419)
T PRK04043 171 IVLADY-TLTYQKVIVKG-GLNIFPKWANKEQTA--------------FYYTSYGERKPTLYKYNLYTGKKEKIASSQGM 234 (419)
T ss_pred EEEECC-CCCceeEEccC-CCeEeEEECCCCCcE--------------EEEEEccCCCCEEEEEECCCCcEEEEecCCCc
Confidence 334342 35544444433 367788899987631 222222 34688889988776554444555
Q ss_pred ceeEEEccCCCEEEEEc----CCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCC---CeEEEEeCCCcc
Q psy6442 84 PNSLEISRDGTTITVTH----GSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGED---LKMYKFDYSTGA 156 (231)
Q Consensus 84 ~~~v~~~~~~~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d---~~i~~~d~~~~~ 156 (231)
.....|+||++.++... ...+.+++.......+....+.... ...++|+++.++..+.. ..|++.|+.+++
T Consensus 235 ~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~~d~--~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~ 312 (419)
T PRK04043 235 LVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQITNYPGIDV--NGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGS 312 (419)
T ss_pred EEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEEEcccCCCccC--ccEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence 55678999998766532 2467778876665433322222111 22348888876665432 368888987776
Q ss_pred eeeec-cCCCCCeeEEEEcCCCCEEEEeeCC---------CcEEEEeCCCCCeeeeeeccCCcccCCCCCCccccc
Q psy6442 157 EIESF-KGHFGPIHCVKFSPDGELYASGSED---------GTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGHL 222 (231)
Q Consensus 157 ~~~~~-~~h~~~V~~v~~spd~~~laS~s~d---------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (231)
..+.. .+.. ...|||||+.|+-.+.. ..|.+.|+.++....+ +. +......+|.++|++
T Consensus 313 ~~rlt~~g~~----~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~L-T~--~~~~~~p~~SPDG~~ 381 (419)
T PRK04043 313 VEQVVFHGKN----NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRRL-TA--NGVNQFPRFSSDGGS 381 (419)
T ss_pred eEeCccCCCc----CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEEC-CC--CCCcCCeEECCCCCE
Confidence 53332 2221 24899999988776643 2577889888875433 32 223445677778775
No 244
>KOG4547|consensus
Probab=98.79 E-value=7.8e-07 Score=75.53 Aligned_cols=155 Identities=14% Similarity=0.136 Sum_probs=112.0
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCceEEEEe----CCcceeEEE------c--------------cCCCEEEEE-cCCeEEE
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAEVQKLEF----GAVPNSLEI------S--------------RDGTTITVT-HGSCVTF 106 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~~~~~~~----~~~~~~v~~------~--------------~~~~~~~~~-~~~~i~~ 106 (231)
..++|....||.+|||+...++....+.- ...-....| + .+...++.+ ..+.+.+
T Consensus 5 ~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~ 84 (541)
T KOG4547|consen 5 LDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLL 84 (541)
T ss_pred hheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEE
Confidence 45678888999999999987665443321 111111111 1 122222223 4578888
Q ss_pred EECCCcceEEeeecc---ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEe
Q psy6442 107 LDANSLELIKEHKVP---AQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASG 183 (231)
Q Consensus 107 ~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~ 183 (231)
++...++....+... ..+.+.. ...+-.++.+++.|.++-.|+..+...++.+.+-...+.+++++||+.+|++|
T Consensus 85 ys~~~g~it~~~st~~h~~~v~~~~--~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~a 162 (541)
T KOG4547|consen 85 YSVAGGEITAKLSTDKHYGNVNEIL--DAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTA 162 (541)
T ss_pred EEecCCeEEEEEecCCCCCcceeee--cccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEec
Confidence 888888777666532 3344333 35666788999999999999999999999998888999999999999999988
Q ss_pred eCCCcEEEEeCCCCCeeeeeeccCCcc
Q psy6442 184 SEDGTLRLWQTNVGKTYGLWKCIEGGL 210 (231)
Q Consensus 184 s~d~~v~iwd~~~~~~~~~~~~~~~~~ 210 (231)
+ ++|++||+++++.+..++++....
T Consensus 163 s--~~ik~~~~~~kevv~~ftgh~s~v 187 (541)
T KOG4547|consen 163 S--RQIKVLDIETKEVVITFTGHGSPV 187 (541)
T ss_pred c--ceEEEEEccCceEEEEecCCCcce
Confidence 8 689999999999999988766553
No 245
>KOG3881|consensus
Probab=98.75 E-value=1.7e-06 Score=70.37 Aligned_cols=160 Identities=19% Similarity=0.245 Sum_probs=116.4
Q ss_pred ccCCCEEEEEeCCCCEEEEeCCCCC----ceEEEEeCCcceeEEEccCCCEEEEEcC----CeEEEEECCCcceEEeeec
Q psy6442 49 AKNNTRLISCAEDKTVRLWDVSASA----EVQKLEFGAVPNSLEISRDGTTITVTHG----SCVTFLDANSLELIKEHKV 120 (231)
Q Consensus 49 ~~~~~~l~s~s~D~ti~iwd~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~----~~i~~~d~~~~~~~~~~~~ 120 (231)
-..+..|++|-.+|.+.+|....+. .+..+..++.+..+.-++....+++..+ +.+.+||+....++...+.
T Consensus 112 ~~~dg~Litc~~sG~l~~~~~k~~d~hss~l~~la~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKN 191 (412)
T KOG3881|consen 112 KLADGTLITCVSSGNLQVRHDKSGDLHSSKLIKLATGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKN 191 (412)
T ss_pred hhcCCEEEEEecCCcEEEEeccCCccccccceeeecCCceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccC
Confidence 3456789999999999999987443 3445566777888888888777666433 4578899877655544221
Q ss_pred --------ccee--EEEEEEecCCCCEEEEecCCCeEEEEeCCCc-ceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcE
Q psy6442 121 --------PAQV--HSASLLLNSERPIFVCGGEDLKMYKFDYSTG-AEIESFKGHFGPIHCVKFSPDGELYASGSEDGTL 189 (231)
Q Consensus 121 --------~~~~--~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~-~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v 189 (231)
..++ ..+.|........++++..-+.+++||.+.+ .++.+|.--..+++++...|+++++.+|..-+.+
T Consensus 192 vpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l 271 (412)
T KOG3881|consen 192 VPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQL 271 (412)
T ss_pred CCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchh
Confidence 1222 2233322223677899999999999999754 4567777677899999999999999999999999
Q ss_pred EEEeCCCCCeeee-eeccCC
Q psy6442 190 RLWQTNVGKTYGL-WKCIEG 208 (231)
Q Consensus 190 ~iwd~~~~~~~~~-~~~~~~ 208 (231)
..||.+.++.... +++..+
T Consensus 272 ~~FD~r~~kl~g~~~kg~tG 291 (412)
T KOG3881|consen 272 AKFDLRGGKLLGCGLKGITG 291 (412)
T ss_pred heecccCceeeccccCCccC
Confidence 9999999987654 555333
No 246
>KOG4532|consensus
Probab=98.74 E-value=3.2e-06 Score=65.85 Aligned_cols=151 Identities=16% Similarity=0.037 Sum_probs=105.1
Q ss_pred CEEEEEeCCCCEEEEeCCCCCceEEEEeC-CcceeEEEccCCCEEEE-EcCCeEEEEECCCcc--eEEeeeccceeEEEE
Q psy6442 53 TRLISCAEDKTVRLWDVSASAEVQKLEFG-AVPNSLEISRDGTTITV-THGSCVTFLDANSLE--LIKEHKVPAQVHSAS 128 (231)
Q Consensus 53 ~~l~s~s~D~ti~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~~ 128 (231)
..+..++.|.|+|+.++..+.....++.+ -..+++.+++|++.+.+ +....+-++.+.... ..+....+..-...+
T Consensus 129 ~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~ 208 (344)
T KOG4532|consen 129 FPLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFY 208 (344)
T ss_pred cceeeccCCcceeEEEEecCcccceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCcee
Confidence 45788999999999998766544444433 23789999999998765 445677777665432 223233333333344
Q ss_pred EEecCCCCEEEEecCCCeEEEEeCCCcce-----eeeccCCCCCeeEEEEcCCCC--EEEEeeCCCcEEEEeCCCCCeee
Q psy6442 129 LLLNSERPIFVCGGEDLKMYKFDYSTGAE-----IESFKGHFGPIHCVKFSPDGE--LYASGSEDGTLRLWQTNVGKTYG 201 (231)
Q Consensus 129 ~~~~~~~~~~~~g~~d~~i~~~d~~~~~~-----~~~~~~h~~~V~~v~~spd~~--~laS~s~d~~v~iwd~~~~~~~~ 201 (231)
..++.....+|.+.+|+++-+||++.... ..+-+.|.++++.+.|+|-|. +|.-...-+.+++-|+++++-.+
T Consensus 209 ~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q 288 (344)
T KOG4532|consen 209 NSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQ 288 (344)
T ss_pred eeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceee
Confidence 44577788899999999999999976432 223346999999999998653 45555556779999999988765
Q ss_pred ee
Q psy6442 202 LW 203 (231)
Q Consensus 202 ~~ 203 (231)
+.
T Consensus 289 ~I 290 (344)
T KOG4532|consen 289 VI 290 (344)
T ss_pred EE
Confidence 43
No 247
>KOG4547|consensus
Probab=98.72 E-value=2.5e-06 Score=72.54 Aligned_cols=192 Identities=17% Similarity=0.187 Sum_probs=127.6
Q ss_pred CcCCCceeeeccCCCeEeeeec--c-cccEEEEEEC--CCC--ceeEeccccccccCC-CEEEEEeCCCCEEEEeCCCCC
Q psy6442 2 CVDGKPMLRQGDTGDWIGTFEG--H-KGCVWGVDIN--KDA--SKAASGAADFQAKNN-TRLISCAEDKTVRLWDVSASA 73 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l~g--H-~~~V~~~~~~--~~~--~~~~s~~~d~~~~~~-~~l~s~s~D~ti~iwd~~~~~ 73 (231)
..||-+|+|+..++++-..|.. | ++.-.+..|. .+. .+-...........+ ..++=|-.-|.|-+|++..++
T Consensus 12 ~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~ys~~~g~ 91 (541)
T KOG4547|consen 12 TGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLLYSVAGGE 91 (541)
T ss_pred CCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEEEEecCCe
Confidence 3689999999998887666542 2 2333334443 110 000000000011122 346666667899999999998
Q ss_pred ceEEEE---eCCcceeEEEccCCCEEEE-EcCCeEEEEECCCcceEEeeeccc-eeEEEEEEecCCCCEEEEecCCCeEE
Q psy6442 74 EVQKLE---FGAVPNSLEISRDGTTITV-THGSCVTFLDANSLELIKEHKVPA-QVHSASLLLNSERPIFVCGGEDLKMY 148 (231)
Q Consensus 74 ~~~~~~---~~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~ 148 (231)
...++. +...++.+.++.+-..++. +.+..+..|+......++..+... .+..++ +.|++.++++++ +.|.
T Consensus 92 it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~--is~D~~~l~~as--~~ik 167 (541)
T KOG4547|consen 92 ITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLC--ISPDGKILLTAS--RQIK 167 (541)
T ss_pred EEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEE--EcCCCCEEEecc--ceEE
Confidence 877776 3456777766665555554 345677788888777777766543 233333 478888888875 6788
Q ss_pred EEeCCCcceeeeccCCCCCeeEEEEcCC-----CC-EEEEeeCCCcEEEEeCCCC
Q psy6442 149 KFDYSTGAEIESFKGHFGPIHCVKFSPD-----GE-LYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 149 ~~d~~~~~~~~~~~~h~~~V~~v~~spd-----~~-~laS~s~d~~v~iwd~~~~ 197 (231)
+||+++.+.+.+|+||.++|++++|..+ |. +|.++..+.-+.+|-+...
T Consensus 168 ~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~ 222 (541)
T KOG4547|consen 168 VLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEKE 222 (541)
T ss_pred EEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEcc
Confidence 9999999999999999999999999987 44 5566677888899987653
No 248
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.71 E-value=7.4e-06 Score=70.17 Aligned_cols=118 Identities=10% Similarity=0.076 Sum_probs=70.3
Q ss_pred cceeEEEccCCCEEEE-Ec-CC--eEEEEECCC-cceEEeeecc-ceeEEEEEEecCCCCEEEEecCC---CeEEEEeCC
Q psy6442 83 VPNSLEISRDGTTITV-TH-GS--CVTFLDANS-LELIKEHKVP-AQVHSASLLLNSERPIFVCGGED---LKMYKFDYS 153 (231)
Q Consensus 83 ~~~~v~~~~~~~~~~~-~~-~~--~i~~~d~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~d---~~i~~~d~~ 153 (231)
.....+|+|||+.++. +. ++ .+.+++... ....+..... .... ...++|+++.++....+ ..|++||+.
T Consensus 282 ~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~--~p~wSPDG~~Laf~~~~~g~~~I~v~dl~ 359 (428)
T PRK01029 282 TQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSS--CPAWSPDGKKIAFCSVIKGVRQICVYDLA 359 (428)
T ss_pred CcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCcc--ceeECCCCCEEEEEEcCCCCcEEEEEECC
Confidence 3456799999997654 32 34 344444432 1112222111 1222 23348899887765432 469999998
Q ss_pred CcceeeeccCCCCCeeEEEEcCCCCEEEEee-C--CCcEEEEeCCCCCeeeee
Q psy6442 154 TGAEIESFKGHFGPIHCVKFSPDGELYASGS-E--DGTLRLWQTNVGKTYGLW 203 (231)
Q Consensus 154 ~~~~~~~~~~h~~~V~~v~~spd~~~laS~s-~--d~~v~iwd~~~~~~~~~~ 203 (231)
+++... +......+....|+|||+.|+..+ . ...|.++|+..++...+-
T Consensus 360 ~g~~~~-Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt 411 (428)
T PRK01029 360 TGRDYQ-LTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIV 411 (428)
T ss_pred CCCeEE-ccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee
Confidence 876543 332334567889999998776443 2 356888899888765544
No 249
>KOG1272|consensus
Probab=98.71 E-value=6.5e-08 Score=80.01 Aligned_cols=178 Identities=16% Similarity=0.224 Sum_probs=125.9
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEE-E
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKL-E 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~-~ 79 (231)
++..|.+...|..+|++++.+.-..|.+..+.-+|- +..+-+|...|+|-+|.....+.+..+ .
T Consensus 227 ~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~---------------NaVih~GhsnGtVSlWSP~skePLvKiLc 291 (545)
T KOG1272|consen 227 ASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPY---------------NAVIHLGHSNGTVSLWSPNSKEPLVKILC 291 (545)
T ss_pred cccCCceEEEeechhhhhHHHHccCCccchhhcCCc---------------cceEEEcCCCceEEecCCCCcchHHHHHh
Confidence 356788899999999999999888899988888884 556888999999999999988876554 5
Q ss_pred eCCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEe-CCCc--
Q psy6442 80 FGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFD-YSTG-- 155 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d-~~~~-- 155 (231)
+...+.++++.++|++++.+ .|..+.+||++....+.++..+.+....++ +..+.+ +.+....+.+|- .-.+
T Consensus 292 H~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~--SqkglL--A~~~G~~v~iw~d~~~~s~ 367 (545)
T KOG1272|consen 292 HRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPHPASNLSL--SQKGLL--ALSYGDHVQIWKDALKGSG 367 (545)
T ss_pred cCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecCCCcccccc--ccccce--eeecCCeeeeehhhhcCCC
Confidence 67899999999999998765 578999999999887777766666555444 555533 334445566663 2221
Q ss_pred ceeeeccCC--CCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCC
Q psy6442 156 AEIESFKGH--FGPIHCVKFSPDGELYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 156 ~~~~~~~~h--~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~ 197 (231)
..-..+..| .++|.++.|.|-...|..|-..|.-.|-=...|
T Consensus 368 ~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G~tsilVPGsG 411 (545)
T KOG1272|consen 368 HGETPYMNHRCGGPVEDLRFCPYEDVLGIGHAGGITSILVPGSG 411 (545)
T ss_pred CCCcchhhhccCcccccceeccHHHeeeccccCCceeEeccCCC
Confidence 111122234 358999999996555555544444334333333
No 250
>KOG1587|consensus
Probab=98.70 E-value=2.9e-06 Score=73.95 Aligned_cols=175 Identities=17% Similarity=0.192 Sum_probs=111.1
Q ss_pred CCceeeeccCC-CeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCc--eE-----
Q psy6442 5 GKPMLRQGDTG-DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAE--VQ----- 76 (231)
Q Consensus 5 ~~~~~~~~~~g-~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~--~~----- 76 (231)
+.+.+|+.+.- +.-..|. -...|.++.|+|. +...++.|..+|+|-+||++.+.. ..
T Consensus 222 ~~~~vW~~~~p~~Pe~~~~-~~s~v~~~~f~p~--------------~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~ 286 (555)
T KOG1587|consen 222 GVLLVWSLKNPNTPELVLE-SPSEVTCLKFCPF--------------DPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSAL 286 (555)
T ss_pred ceEEEEecCCCCCceEEEe-cCCceeEEEeccC--------------CcceEEeeccCceEEEEEccCCCCCCCcccccc
Confidence 35778887544 2222233 2567888888875 456789999999999999987655 21
Q ss_pred EEEeCCcceeEEEccCCC---EEEEEcCCeEEEEECCCcceEEe-----eec--------cceeEEEEEEecCCCCEEEE
Q psy6442 77 KLEFGAVPNSLEISRDGT---TITVTHGSCVTFLDANSLELIKE-----HKV--------PAQVHSASLLLNSERPIFVC 140 (231)
Q Consensus 77 ~~~~~~~~~~v~~~~~~~---~~~~~~~~~i~~~d~~~~~~~~~-----~~~--------~~~~~~~~~~~~~~~~~~~~ 140 (231)
...+...+..+.|..+.. .+.++.|+.|..|+++....... ... ......+.+. ..+-..++.
T Consensus 287 ~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~-~~~p~~FiV 365 (555)
T KOG1587|consen 287 EVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFE-PTDPNHFIV 365 (555)
T ss_pred cccCCcCeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeec-cCCCceEEE
Confidence 122456677777765432 45566799999998765433111 000 1122222221 223445889
Q ss_pred ecCCCeEEEEeC---CCc-----ceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCC
Q psy6442 141 GGEDLKMYKFDY---STG-----AEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 141 g~~d~~i~~~d~---~~~-----~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~ 195 (231)
|.++|.|+.-.- ... +.+..+..|.++|+++.++|=+..+...+.|-+||||.-.
T Consensus 366 GTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~ 428 (555)
T KOG1587|consen 366 GTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSED 428 (555)
T ss_pred EcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEecccc
Confidence 999999887322 211 1234566789999999999987644444449999999876
No 251
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.70 E-value=6.9e-06 Score=68.89 Aligned_cols=144 Identities=14% Similarity=0.172 Sum_probs=100.9
Q ss_pred EEEEeCCCCEEEEeCCCCCceEEEEeCCc-ceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeeccceeEEEEEEec
Q psy6442 55 LISCAEDKTVRLWDVSASAEVQKLEFGAV-PNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVPAQVHSASLLLN 132 (231)
Q Consensus 55 l~s~s~D~ti~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 132 (231)
+++-..+++|.+.|..+.+.+..+..... ...+.++||++.+++. .++.+.++|+.+.+.+++.+.......+.+ +
T Consensus 9 ~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~~~i~~--s 86 (369)
T PF02239_consen 9 YVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNPRGIAV--S 86 (369)
T ss_dssp EEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEEEEEEE---
T ss_pred EEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCcceEEE--c
Confidence 45667789999999999999999987544 4667899999988765 478999999999999998877665554444 8
Q ss_pred CCCCEEEEec-CCCeEEEEeCCCcceeeeccCC-------CCCeeEEEEcCCCCEEE-EeeCCCcEEEEeCCCCCee
Q psy6442 133 SERPIFVCGG-EDLKMYKFDYSTGAEIESFKGH-------FGPIHCVKFSPDGELYA-SGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 133 ~~~~~~~~g~-~d~~i~~~d~~~~~~~~~~~~h-------~~~V~~v~~spd~~~la-S~s~d~~v~iwd~~~~~~~ 200 (231)
++++.++.++ ..+.+.++|.++.+.++++... ...+..+..+|....++ +--+.+.|-+-|....+..
T Consensus 87 ~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~ 163 (369)
T PF02239_consen 87 PDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNL 163 (369)
T ss_dssp -TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCE
T ss_pred CCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEecccccc
Confidence 8999887665 6789999999998888776432 34577888899887554 4455688888898776543
No 252
>KOG0280|consensus
Probab=98.69 E-value=3.5e-07 Score=71.75 Aligned_cols=165 Identities=16% Similarity=0.164 Sum_probs=100.1
Q ss_pred eeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCC-CCceEE--EEeCCcceeEEEccCC-C
Q psy6442 19 GTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSA-SAEVQK--LEFGAVPNSLEISRDG-T 94 (231)
Q Consensus 19 ~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~-~~~~~~--~~~~~~~~~v~~~~~~-~ 94 (231)
+++++|.-..|...|+.. +...++|||.|+.+..||++. ++++.. ..+...+.++.-+|.. .
T Consensus 159 q~wk~He~E~Wta~f~~~--------------~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~ 224 (339)
T KOG0280|consen 159 QTWKVHEFEAWTAKFSDK--------------EPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPT 224 (339)
T ss_pred ccccccceeeeeeecccC--------------CCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCc
Confidence 378899999998888754 356789999999999999993 333322 2244566777766654 4
Q ss_pred EEEEE-cCCeEEEEECCCc-ceEEeeeccceeEEEEEEecCCCCEEEEecCCC-eEEEEeCCCcc---eeeeccCCCCCe
Q psy6442 95 TITVT-HGSCVTFLDANSL-ELIKEHKVPAQVHSASLLLNSERPIFVCGGEDL-KMYKFDYSTGA---EIESFKGHFGPI 168 (231)
Q Consensus 95 ~~~~~-~~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~-~i~~~d~~~~~---~~~~~~~h~~~V 168 (231)
.++++ .+.+|++||.++. +++........+-.+...+...+.+++++...| .|....-...+ .+...+.|.+-+
T Consensus 225 ~I~TGsYDe~i~~~DtRnm~kPl~~~~v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~~~e~~~~~~s~~~hdSl~ 304 (339)
T KOG0280|consen 225 YIATGSYDECIRVLDTRNMGKPLFKAKVGGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDKVLEFQIVLPSDKIHDSLC 304 (339)
T ss_pred eEEEeccccceeeeehhcccCccccCccccceEEEEecchhhhHHHHHHHhcCceEEEecccccchheeeecccccccee
Confidence 55554 5789999999854 444444444445444443222333444444333 23322222223 344556677666
Q ss_pred eEEEEcCCCCEEEEee-CCCcEE-EEeCCCC
Q psy6442 169 HCVKFSPDGELYASGS-EDGTLR-LWQTNVG 197 (231)
Q Consensus 169 ~~v~~spd~~~laS~s-~d~~v~-iwd~~~~ 197 (231)
..-.|.....+||||+ .|+.++ +|-..++
T Consensus 305 YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t~ 335 (339)
T KOG0280|consen 305 YGGDWDSKDSFLATCSFYDKKIRQLWLHITG 335 (339)
T ss_pred eccccccccceeeeeeccccceeeeeeeccC
Confidence 6666644456899987 566655 6654443
No 253
>KOG3914|consensus
Probab=98.69 E-value=6.7e-07 Score=72.78 Aligned_cols=146 Identities=21% Similarity=0.279 Sum_probs=92.3
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCc----eEEEEeCCcceeEEEccCCCEEEEE-cCCeEEEEE---CCCcceEEeeeccce
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAE----VQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLD---ANSLELIKEHKVPAQ 123 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d---~~~~~~~~~~~~~~~ 123 (231)
+..||.+-.++...+.++..... .........++.+.+..+...+.+. ..+....+| ............-.-
T Consensus 74 ~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~~~~lGhvSm 153 (390)
T KOG3914|consen 74 GRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRCEPILGHVSM 153 (390)
T ss_pred ceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccCcchhhhhhhh
Confidence 44566666666655666554332 2222344556666666666554443 223333333 222111111111111
Q ss_pred eEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeec-cCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCee
Q psy6442 124 VHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESF-KGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 124 ~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~-~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~ 200 (231)
+. .+.++++.++++++..|..||+-.....-.++.| -||+.-|..++.-++. .|+|++.|++|++||+.+|+..
T Consensus 154 l~--dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~-~LlS~sGD~tlr~Wd~~sgk~L 228 (390)
T KOG3914|consen 154 LL--DVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNY-LLLSGSGDKTLRLWDITSGKLL 228 (390)
T ss_pred hh--eeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCc-eeeecCCCCcEEEEecccCCcc
Confidence 22 2345889999999999999999877666667776 4899999999998875 4899999999999999999864
No 254
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.69 E-value=1.7e-05 Score=74.88 Aligned_cols=149 Identities=17% Similarity=0.199 Sum_probs=99.7
Q ss_pred CCCEEEEEeCCCCEEEEeCCCCCceEEEE---------------eCCcceeEEEccCCCEEEEEc--CCeEEEEECCCcc
Q psy6442 51 NNTRLISCAEDKTVRLWDVSASAEVQKLE---------------FGAVPNSLEISRDGTTITVTH--GSCVTFLDANSLE 113 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iwd~~~~~~~~~~~---------------~~~~~~~v~~~~~~~~~~~~~--~~~i~~~d~~~~~ 113 (231)
++..+++.+.++.|++||..++....... .-..+..++++|++..++++. ++.|+.||..+..
T Consensus 694 ~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~ 773 (1057)
T PLN02919 694 NEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGG 773 (1057)
T ss_pred CCeEEEEECCCCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCc
Confidence 34556777778899999987664321100 012467899999998776653 4699999987544
Q ss_pred eEEeee-----------cc---------ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeec------------
Q psy6442 114 LIKEHK-----------VP---------AQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESF------------ 161 (231)
Q Consensus 114 ~~~~~~-----------~~---------~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~------------ 161 (231)
...... .. .-.....+..++++.++++-..+.+|++||..++......
T Consensus 774 ~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~ 853 (1057)
T PLN02919 774 SRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKA 853 (1057)
T ss_pred EEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcc
Confidence 211100 00 0001123334778888888888999999998776543211
Q ss_pred -cCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCe
Q psy6442 162 -KGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKT 199 (231)
Q Consensus 162 -~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~ 199 (231)
.+.-.....|+++|+|+++++-+.++.|++||+.+++.
T Consensus 854 ~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 854 LKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred cccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 11223577899999999999999999999999998875
No 255
>KOG2394|consensus
Probab=98.68 E-value=1.4e-07 Score=79.32 Aligned_cols=117 Identities=21% Similarity=0.322 Sum_probs=94.0
Q ss_pred CCcceeEEEccCCCEEE-EEcCCeEEEEECCCcceEEeeec-cceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCccee
Q psy6442 81 GAVPNSLEISRDGTTIT-VTHGSCVTFLDANSLELIKEHKV-PAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEI 158 (231)
Q Consensus 81 ~~~~~~v~~~~~~~~~~-~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~ 158 (231)
...++..+|+||++.++ ++.++.+++++-.+.+.+...+. =....+++| +|+++++++|++|--+.+|.+..++.+
T Consensus 290 ~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcW--SPDGKyIvtGGEDDLVtVwSf~erRVV 367 (636)
T KOG2394|consen 290 EGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCW--SPDGKYIVTGGEDDLVTVWSFEERRVV 367 (636)
T ss_pred cccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEE--cCCccEEEecCCcceEEEEEeccceEE
Confidence 35788999999999875 58899999999887776544332 123444444 999999999999999999999999999
Q ss_pred eeccCCCCCeeEEEEcC-------------------------------C----C-------------CEEEEeeCCCcEE
Q psy6442 159 ESFKGHFGPIHCVKFSP-------------------------------D----G-------------ELYASGSEDGTLR 190 (231)
Q Consensus 159 ~~~~~h~~~V~~v~~sp-------------------------------d----~-------------~~laS~s~d~~v~ 190 (231)
..-+||+.-|..|+|.| + + ..|.|.+.|-.+-
T Consensus 368 ARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~r~~~~~S~~~~~~s~~~~~~~v~YRfGSVGqDTqlc 447 (636)
T KOG2394|consen 368 ARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEIRANGTGSAEGCPLSSFNRINSVTYRFGSVGQDTQLC 447 (636)
T ss_pred EeccccccceeeEeecccccccccccccccccccccchhcccccccCCCCCcCCCcccccccccceEEEeecccccceEE
Confidence 99999999999999983 0 1 2688899999999
Q ss_pred EEeCCCCCe
Q psy6442 191 LWQTNVGKT 199 (231)
Q Consensus 191 iwd~~~~~~ 199 (231)
|||+.....
T Consensus 448 LWDlteD~L 456 (636)
T KOG2394|consen 448 LWDLTEDVL 456 (636)
T ss_pred EEecchhhc
Confidence 999865543
No 256
>KOG1064|consensus
Probab=98.65 E-value=1.8e-07 Score=88.20 Aligned_cols=149 Identities=10% Similarity=0.233 Sum_probs=104.8
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCceEEEEe--CCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeeccc-eeEEE
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAEVQKLEF--GAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVPA-QVHSA 127 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~-~~~~~ 127 (231)
....+|++.||.|++|.-..+..+..... ...+..+.++.+|..+.+. .++.+.+|....+-.+ ....+. .....
T Consensus 2220 ~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~pk~~~-s~qchnk~~~Df 2298 (2439)
T KOG1064|consen 2220 DPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQASPKPYT-SWQCHNKALSDF 2298 (2439)
T ss_pred CceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccCCccee-ccccCCccccce
Confidence 45688999999999999888877655543 2456777888888876554 5789999998733221 111111 11111
Q ss_pred EEEecCCCCEEEEe---cCCCeEEEEeCCCc---ceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeee
Q psy6442 128 SLLLNSERPIFVCG---GEDLKMYKFDYSTG---AEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYG 201 (231)
Q Consensus 128 ~~~~~~~~~~~~~g---~~d~~i~~~d~~~~---~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~ 201 (231)
.+. +..++++ ++++.+-+||.-.. .+++ ..|.+.++++++-|..++|.||+++|.|.|||++..+...
T Consensus 2299 ~Fi----~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h 2372 (2439)
T KOG1064|consen 2299 RFI----GSLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRH 2372 (2439)
T ss_pred eee----ehhhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHH
Confidence 221 1233433 34578999997432 3445 6799999999999999999999999999999999998887
Q ss_pred eeeccC
Q psy6442 202 LWKCIE 207 (231)
Q Consensus 202 ~~~~~~ 207 (231)
.|+...
T Consensus 2373 ~~~~~~ 2378 (2439)
T KOG1064|consen 2373 TFQALD 2378 (2439)
T ss_pred Hhhhhh
Confidence 777654
No 257
>KOG0882|consensus
Probab=98.65 E-value=1.4e-07 Score=77.90 Aligned_cols=188 Identities=16% Similarity=0.196 Sum_probs=129.7
Q ss_pred CCcCCCceeeeccC--C-CeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeC-CCCEEEEeCCCCCceE
Q psy6442 1 MCVDGKPMLRQGDT--G-DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAE-DKTVRLWDVSASAEVQ 76 (231)
Q Consensus 1 ~~~d~~~~~~~~~~--g-~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~-D~ti~iwd~~~~~~~~ 76 (231)
++.||-++.|.... | +.+..+..|-+.|.++..+-++ ..+.|.+. |..+|++|+.......
T Consensus 26 ASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg---------------~L~~Sv~d~Dhs~KvfDvEn~Dmin 90 (558)
T KOG0882|consen 26 ASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDG---------------WLFRSVEDPDHSVKVFDVENFDMIN 90 (558)
T ss_pred eecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccc---------------eeEeeccCcccceeEEEeeccchhh
Confidence 47899999999643 2 4677788999999988877654 44677666 9999999998877665
Q ss_pred EEEeCCcceeEEEccCCC----EEEEE--cCCeEEEEECCCcceEE--eeecc-ceeEEEEEEecCCCCEEEEecCCCeE
Q psy6442 77 KLEFGAVPNSLEISRDGT----TITVT--HGSCVTFLDANSLELIK--EHKVP-AQVHSASLLLNSERPIFVCGGEDLKM 147 (231)
Q Consensus 77 ~~~~~~~~~~v~~~~~~~----~~~~~--~~~~i~~~d~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~g~~d~~i 147 (231)
-+.+...|..+.|..... .++++ .++.+.++|.....+.. ..+.+ .++..... .+.+..+++....|.|
T Consensus 91 miKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y--~qa~Ds~vSiD~~gmV 168 (558)
T KOG0882|consen 91 MIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRY--NQAGDSAVSIDISGMV 168 (558)
T ss_pred hcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEe--eccccceeecccccee
Confidence 555555555555543322 34443 45688888866543221 11122 23443333 5666678888888999
Q ss_pred EEEeCCC------cc---------eeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeec
Q psy6442 148 YKFDYST------GA---------EIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKC 205 (231)
Q Consensus 148 ~~~d~~~------~~---------~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~ 205 (231)
..|.... .. .+..+...+....++.|+|++..+++-+.|..||++++.+|+.++..++
T Consensus 169 EyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE 241 (558)
T KOG0882|consen 169 EYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDE 241 (558)
T ss_pred EeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhc
Confidence 9997652 11 1223344566788999999999999999999999999999998765543
No 258
>KOG1354|consensus
Probab=98.65 E-value=4e-07 Score=72.96 Aligned_cols=116 Identities=21% Similarity=0.265 Sum_probs=72.7
Q ss_pred CcceeEEEccCCCEEEEEcCCeEEEEECCCcce------EEeeecc--ce-eEEEEEEecC-CCCEEEEecCCCeEEEEe
Q psy6442 82 AVPNSLEISRDGTTITVTHGSCVTFLDANSLEL------IKEHKVP--AQ-VHSASLLLNS-ERPIFVCGGEDLKMYKFD 151 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~------~~~~~~~--~~-~~~~~~~~~~-~~~~~~~g~~d~~i~~~d 151 (231)
..++++++..|+.+++.+.+=.|.+|.+.-... +++.+.. .. +++..+ +| ...+++..+..|+|++.|
T Consensus 165 yhiNSIS~NsD~Et~lSADdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEF--hp~~cn~f~YSSSKGtIrLcD 242 (433)
T KOG1354|consen 165 YHINSISVNSDKETFLSADDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEF--HPHHCNVFVYSSSKGTIRLCD 242 (433)
T ss_pred eEeeeeeecCccceEeeccceeeeeccccccCCceeEEEccccCHHHHHHHHhhhcc--CHhHccEEEEecCCCcEEEee
Confidence 356788888888887777777888887653221 1111111 01 122222 33 344577778899999999
Q ss_pred CCCcceee----e------------ccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeC-CCCCee
Q psy6442 152 YSTGAEIE----S------------FKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQT-NVGKTY 200 (231)
Q Consensus 152 ~~~~~~~~----~------------~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~-~~~~~~ 200 (231)
++...+.. . |.+--..|.++.|+++|++++|-.. -+|+|||+ ...++.
T Consensus 243 mR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv 307 (433)
T KOG1354|consen 243 MRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPV 307 (433)
T ss_pred chhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcc
Confidence 98543211 0 1122346789999999999987665 67999998 344443
No 259
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.63 E-value=6.2e-05 Score=63.16 Aligned_cols=172 Identities=14% Similarity=0.185 Sum_probs=116.4
Q ss_pred cccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEE-EcC-CeEEEEECCCcceEEeeeccce
Q psy6442 46 DFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITV-THG-SCVTFLDANSLELIKEHKVPAQ 123 (231)
Q Consensus 46 d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~-~~i~~~d~~~~~~~~~~~~~~~ 123 (231)
|+.+.++.+++..|. |.+.|.+.-.+..+ .+.....+.-..+..+..-+++ ..+ ..+.++|....+..+..+.-..
T Consensus 326 dfa~~~Gd~ia~VSR-GkaFi~~~~~~~~i-qv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg~ 403 (668)
T COG4946 326 DFAVVNGDYIALVSR-GKAFIMRPWDGYSI-QVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDLGN 403 (668)
T ss_pred hhccCCCcEEEEEec-CcEEEECCCCCeeE-EcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCccc
Confidence 566778899888885 55666665444332 1222333444444444443333 334 4889999877665444333233
Q ss_pred eEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCC----CcEEEEeCCCCCe
Q psy6442 124 VHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSED----GTLRLWQTNVGKT 199 (231)
Q Consensus 124 ~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d----~~v~iwd~~~~~~ 199 (231)
+.++ ..++++..++.+.....+++.|+.++.....=+...+-|+...|||+++++|-+-.+ ..|+|+|...+|.
T Consensus 404 I~av--~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Ki 481 (668)
T COG4946 404 IEAV--KVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKI 481 (668)
T ss_pred eEEE--EEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeE
Confidence 4443 348999999999999999999999887544334567889999999999999988665 4689999999998
Q ss_pred eeeeeccCCcccCCCCCCcccccc
Q psy6442 200 YGLWKCIEGGLNNSLGLDSSGHLN 223 (231)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~ 223 (231)
+..=+ +.+.-.+=+|+++|..+
T Consensus 482 y~vTT--~ta~DfsPaFD~d~ryL 503 (668)
T COG4946 482 YDVTT--PTAYDFSPAFDPDGRYL 503 (668)
T ss_pred EEecC--CcccccCcccCCCCcEE
Confidence 87655 34455556777777643
No 260
>KOG0280|consensus
Probab=98.60 E-value=1.3e-05 Score=63.13 Aligned_cols=146 Identities=23% Similarity=0.292 Sum_probs=91.3
Q ss_pred EEEEEeCCCCEEEEeCCCCCceEEEE------eCC-cceeEEEccCCCEEEEEcC-CeEEEEECCCcceEE--eeec-cc
Q psy6442 54 RLISCAEDKTVRLWDVSASAEVQKLE------FGA-VPNSLEISRDGTTITVTHG-SCVTFLDANSLELIK--EHKV-PA 122 (231)
Q Consensus 54 ~l~s~s~D~ti~iwd~~~~~~~~~~~------~~~-~~~~v~~~~~~~~~~~~~~-~~i~~~d~~~~~~~~--~~~~-~~ 122 (231)
.|+-+-.+|.|.++..........+. ... ...++-|++.+..++++.. +.+...+........ ..+. +.
T Consensus 87 ~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~ 166 (339)
T KOG0280|consen 87 NLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEF 166 (339)
T ss_pred eeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccce
Confidence 46667778888888764332222211 111 2456778888888877653 455544443333222 1111 11
Q ss_pred eeEEEEEEecCCCCEEEEecCCCeEEEEeCC-Ccceeee-ccCCCCCeeEEEEcCC-CCEEEEeeCCCcEEEEeCC-CCC
Q psy6442 123 QVHSASLLLNSERPIFVCGGEDLKMYKFDYS-TGAEIES-FKGHFGPIHCVKFSPD-GELYASGSEDGTLRLWQTN-VGK 198 (231)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~-~~~~~~~-~~~h~~~V~~v~~spd-~~~laS~s~d~~v~iwd~~-~~~ 198 (231)
+.-...+. ..+..++.+|++|+.+..||++ .++.+.+ -+-|...|.++.-+|. +.++++|+.|.+|++||.+ -+|
T Consensus 167 E~Wta~f~-~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~k 245 (339)
T KOG0280|consen 167 EAWTAKFS-DKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGK 245 (339)
T ss_pred eeeeeecc-cCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccC
Confidence 22222221 2233567899999999999998 3333433 4568889999998884 7899999999999999998 555
Q ss_pred ee
Q psy6442 199 TY 200 (231)
Q Consensus 199 ~~ 200 (231)
+.
T Consensus 246 Pl 247 (339)
T KOG0280|consen 246 PL 247 (339)
T ss_pred cc
Confidence 54
No 261
>KOG4497|consensus
Probab=98.59 E-value=1.5e-06 Score=69.46 Aligned_cols=190 Identities=17% Similarity=0.147 Sum_probs=119.9
Q ss_pred EEEECCCCceeEeccccc--------------------------cccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeC-C
Q psy6442 30 GVDINKDASKAASGAADF--------------------------QAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFG-A 82 (231)
Q Consensus 30 ~~~~~~~~~~~~s~~~d~--------------------------~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~-~ 82 (231)
...|+|+|+++++.+... .....-.|..+..|+.|.+|++...+-..++..+ .
T Consensus 13 ~c~fSp~g~yiAs~~~yrlviRd~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~a 92 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRYRLVIRDSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQA 92 (447)
T ss_pred ceeECCCCCeeeeeeeeEEEEeccchhhHHHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCC
Confidence 356788888888875431 1113345778888999999999877666666654 4
Q ss_pred cceeEEEccCCCEEEEE--cCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCe---EEEEeCCCcce
Q psy6442 83 VPNSLEISRDGTTITVT--HGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLK---MYKFDYSTGAE 157 (231)
Q Consensus 83 ~~~~v~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~---i~~~d~~~~~~ 157 (231)
.+...+|+|||+.+... .+-.|.+|.+.+.+.....-....+..++ +++++++.+..+.--+ +.+.-.+.-.+
T Consensus 93 gls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~--f~~dg~f~ai~sRrDCkdyv~i~~c~~W~l 170 (447)
T KOG4497|consen 93 GLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYA--FHPDGQFCAILSRRDCKDYVQISSCKAWIL 170 (447)
T ss_pred cceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEE--ECCCCceeeeeecccHHHHHHHHhhHHHHH
Confidence 56789999999876543 35688999998876544322222333333 4889998777653211 11111111123
Q ss_pred eeeccCCCCCeeEEEEcCCCCEEEEeeC--CCcEEEEeCCCCCeeeeeeccCCcccCCCCCCccccccce
Q psy6442 158 IESFKGHFGPIHCVKFSPDGELYASGSE--DGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGHLNNV 225 (231)
Q Consensus 158 ~~~~~~h~~~V~~v~~spd~~~laS~s~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (231)
+..+.-.+-..+.+.|+|||..||.=.. +-.|.+|.-..|-..-.|. -++-++++.+.+.|+.|
T Consensus 171 l~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~~lG~k~v~ws----P~~qflavGsyD~~lrv 236 (447)
T KOG4497|consen 171 LKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYERGLGLKFVEWS----PCNQFLAVGSYDQMLRV 236 (447)
T ss_pred HHhcCCCcccccCceECCCCcEEEEecchhhheeeeeeeccceeEEEec----cccceEEeeccchhhhh
Confidence 4555555666788999999998875432 3444566666666666665 23456777776665544
No 262
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.59 E-value=3.2e-05 Score=60.59 Aligned_cols=181 Identities=17% Similarity=0.159 Sum_probs=113.3
Q ss_pred cCCCceeeeccCCCeEeeeec---ccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE
Q psy6442 3 VDGKPMLRQGDTGDWIGTFEG---HKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE 79 (231)
Q Consensus 3 ~d~~~~~~~~~~g~~i~~l~g---H~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~ 79 (231)
.+|+|..+|+.+|+.+-...- ..+.+.. ...+++.+++++.++.+..||..+++.+....
T Consensus 1 ~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~-----------------~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~ 63 (238)
T PF13360_consen 1 DDGTLSALDPRTGKELWSYDLGPGIGGPVAT-----------------AVPDGGRVYVASGDGNLYALDAKTGKVLWRFD 63 (238)
T ss_dssp -TSEEEEEETTTTEEEEEEECSSSCSSEEET-----------------EEEETTEEEEEETTSEEEEEETTTSEEEEEEE
T ss_pred CCCEEEEEECCCCCEEEEEECCCCCCCccce-----------------EEEeCCEEEEEcCCCEEEEEECCCCCEEEEee
Confidence 478899999988987766532 1222210 11235678888899999999999999888877
Q ss_pred eCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEee-eccc---ee-EEEEEEecCCCCEEEEecCCCeEEEEeCCC
Q psy6442 80 FGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEH-KVPA---QV-HSASLLLNSERPIFVCGGEDLKMYKFDYST 154 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~~---~~-~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~ 154 (231)
....+.......++..++...++.+..+|..+++.+... .... .. ..... ...+..++.+..++.++.+|.++
T Consensus 64 ~~~~~~~~~~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~l~~~d~~t 141 (238)
T PF13360_consen 64 LPGPISGAPVVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSP--AVDGDRLYVGTSSGKLVALDPKT 141 (238)
T ss_dssp CSSCGGSGEEEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEE--EEETTEEEEEETCSEEEEEETTT
T ss_pred ccccccceeeecccccccccceeeeEecccCCcceeeeeccccccccccccccCc--eEecCEEEEEeccCcEEEEecCC
Confidence 755433333334444545556778999998888887763 3221 11 11111 11255677777799999999999
Q ss_pred cceeeeccCCCCC----------eeEEEEcCCCCEEEEeeCCCc-EEEEeCCCCCeeeeeecc
Q psy6442 155 GAEIESFKGHFGP----------IHCVKFSPDGELYASGSEDGT-LRLWQTNVGKTYGLWKCI 206 (231)
Q Consensus 155 ~~~~~~~~~h~~~----------V~~v~~spd~~~laS~s~d~~-v~iwd~~~~~~~~~~~~~ 206 (231)
|+.+..+.....+ +..-....++ .+..++.++. +.+ |+.+++.. |+..
T Consensus 142 G~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~-d~~tg~~~--w~~~ 200 (238)
T PF13360_consen 142 GKLLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAV-DLATGEKL--WSKP 200 (238)
T ss_dssp TEEEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEE-ETTTTEEE--EEEC
T ss_pred CcEEEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEE-ECCCCCEE--EEec
Confidence 9988776554322 1222222344 5555666664 566 99999844 7543
No 263
>KOG1334|consensus
Probab=98.58 E-value=2.7e-07 Score=76.87 Aligned_cols=201 Identities=19% Similarity=0.287 Sum_probs=133.4
Q ss_pred CCcCCCceeeeccCCCeEeee-ecccccEEEEEECCC--CceeEecccccccc---------------------------
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTF-EGHKGCVWGVDINKD--ASKAASGAADFQAK--------------------------- 50 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l-~gH~~~V~~~~~~~~--~~~~~s~~~d~~~~--------------------------- 50 (231)
+|+|-+|.+|+=..++....| .||...|+.-.|-|. .+.+++.+.|..++
T Consensus 160 gSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~~e~t~rl~~h~g~vhkla 239 (559)
T KOG1334|consen 160 GSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILETGYVENTKRLAPHEGPVHKLA 239 (559)
T ss_pred cCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeeccccceecceecccccCccceee
Confidence 578999999998888765555 689999999988774 35666666665443
Q ss_pred ----CCCEEEEEeCCCCEEEEeCCCCCceEEEEe---C-C---cceeEEEccCCC-EEEEE-cCCeEEEEECCCcceE--
Q psy6442 51 ----NNTRLISCAEDKTVRLWDVSASAEVQKLEF---G-A---VPNSLEISRDGT-TITVT-HGSCVTFLDANSLELI-- 115 (231)
Q Consensus 51 ----~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~---~-~---~~~~v~~~~~~~-~~~~~-~~~~i~~~d~~~~~~~-- 115 (231)
....+.||+.|+.++-.|++......++.. . . ..++++..|... .++++ .+...+++|.+.....
T Consensus 240 v~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~ 319 (559)
T KOG1334|consen 240 VEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEEN 319 (559)
T ss_pred ecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccccccCChhhhhhhhcccchhhccc
Confidence 345688999999999999987765444432 1 1 346777777665 34443 3567788886643221
Q ss_pred ----Eee-----eccceeEEEEEEecCCCCEEEEecCCCeEEEEeCC--Cc----------ceeee-ccCCCCC--eeEE
Q psy6442 116 ----KEH-----KVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYS--TG----------AEIES-FKGHFGP--IHCV 171 (231)
Q Consensus 116 ----~~~-----~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~--~~----------~~~~~-~~~h~~~--V~~v 171 (231)
..+ ....++...++.++.++.-+++...|--|++|.-. .| ...+. ++||... |-.+
T Consensus 320 n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgV 399 (559)
T KOG1334|consen 320 NGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGV 399 (559)
T ss_pred cchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhccccccccccee
Confidence 111 11223333344446566666666778888888432 23 23334 7899754 4444
Q ss_pred E-EcCCCCEEEEeeCCCcEEEEeCCCCCeee
Q psy6442 172 K-FSPDGELYASGSEDGTLRLWQTNVGKTYG 201 (231)
Q Consensus 172 ~-~spd~~~laS~s~d~~v~iwd~~~~~~~~ 201 (231)
- |-|...+++|||+=|.|.||+-.+++.+.
T Consensus 400 NFfGPrsEyVvSGSDCGhIFiW~K~t~eii~ 430 (559)
T KOG1334|consen 400 NFFGPRSEYVVSGSDCGHIFIWDKKTGEIIR 430 (559)
T ss_pred eeccCccceEEecCccceEEEEecchhHHHH
Confidence 4 66788999999999999999998887653
No 264
>KOG1523|consensus
Probab=98.54 E-value=7.9e-06 Score=65.01 Aligned_cols=154 Identities=14% Similarity=0.205 Sum_probs=105.8
Q ss_pred ccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCc---eEEE-EeCCcceeEEEccCCCE-EEE
Q psy6442 24 HKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAE---VQKL-EFGAVPNSLEISRDGTT-ITV 98 (231)
Q Consensus 24 H~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~---~~~~-~~~~~~~~v~~~~~~~~-~~~ 98 (231)
-..+|++.+|++|.+ .++.+-....|.||....... ..++ ++...++.+.|+|..+. +.+
T Consensus 9 ~~~pitchAwn~drt---------------~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtc 73 (361)
T KOG1523|consen 9 LLEPITCHAWNSDRT---------------QIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTC 73 (361)
T ss_pred ccCceeeeeecCCCc---------------eEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEc
Confidence 356899999999854 467777777888988766552 2333 24678899999998854 455
Q ss_pred EcCCeEEEEECCCcceEEe----eeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcce--e--eeccCCCCCeeE
Q psy6442 99 THGSCVTFLDANSLELIKE----HKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAE--I--ESFKGHFGPIHC 170 (231)
Q Consensus 99 ~~~~~i~~~d~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~--~--~~~~~h~~~V~~ 170 (231)
+.+..-.+|........+. .+......+ +.+.|.+..++.|+.-..|-+|-.+.... + +.-+-+...|++
T Consensus 74 s~drnayVw~~~~~~~WkptlvLlRiNrAAt~--V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~s 151 (361)
T KOG1523|consen 74 SHDRNAYVWTQPSGGTWKPTLVLLRINRAATC--VKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTS 151 (361)
T ss_pred cCCCCccccccCCCCeeccceeEEEeccceee--EeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceee
Confidence 6777788887743332221 122222333 33488888999998887777665432211 1 122346678999
Q ss_pred EEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 171 VKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 171 v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
++|+|++-+|++||.|+..|||..
T Consensus 152 ldWhpnnVLlaaGs~D~k~rVfSa 175 (361)
T KOG1523|consen 152 LDWHPNNVLLAAGSTDGKCRVFSA 175 (361)
T ss_pred eeccCCcceecccccCcceeEEEE
Confidence 999999999999999999999985
No 265
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.51 E-value=6.6e-05 Score=62.58 Aligned_cols=140 Identities=19% Similarity=0.304 Sum_probs=85.2
Q ss_pred CCCEEEEeCCCCC--ce--EEEE--eCCcceeEEEccCCCEEEEEc--CCeEEEEECC--Ccc--eEEeeec-c----ce
Q psy6442 61 DKTVRLWDVSASA--EV--QKLE--FGAVPNSLEISRDGTTITVTH--GSCVTFLDAN--SLE--LIKEHKV-P----AQ 123 (231)
Q Consensus 61 D~ti~iwd~~~~~--~~--~~~~--~~~~~~~v~~~~~~~~~~~~~--~~~i~~~d~~--~~~--~~~~~~~-~----~~ 123 (231)
...|.+|++.... .. ..+. .+..+..+.|+|+++.+++.. .+.+..++.. ... .+..... + ..
T Consensus 165 ~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~ 244 (345)
T PF10282_consen 165 ADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGE 244 (345)
T ss_dssp TTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSS
T ss_pred CCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeecccccccc
Confidence 3468888887654 22 2222 245789999999999988764 5688887765 322 2222211 1 11
Q ss_pred eEEEEEEecCCCCEEEEec-CCCeEEEEeC--CCcc--eeeeccCCCCCeeEEEEcCCCCEEEEee-CCCcEEEEeC--C
Q psy6442 124 VHSASLLLNSERPIFVCGG-EDLKMYKFDY--STGA--EIESFKGHFGPIHCVKFSPDGELYASGS-EDGTLRLWQT--N 195 (231)
Q Consensus 124 ~~~~~~~~~~~~~~~~~g~-~d~~i~~~d~--~~~~--~~~~~~~h~~~V~~v~~spd~~~laS~s-~d~~v~iwd~--~ 195 (231)
.....+..+|+++++.... ....|.+|++ .++. .+..+.......+.++++|+|++|+.+. .++.|.+|++ .
T Consensus 245 ~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~ 324 (345)
T PF10282_consen 245 NAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPD 324 (345)
T ss_dssp SSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETT
T ss_pred CCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCC
Confidence 1334455689999877654 4457888887 3343 2333433334589999999999887665 6778999965 5
Q ss_pred CCCee
Q psy6442 196 VGKTY 200 (231)
Q Consensus 196 ~~~~~ 200 (231)
+|+..
T Consensus 325 tG~l~ 329 (345)
T PF10282_consen 325 TGKLT 329 (345)
T ss_dssp TTEEE
T ss_pred CCcEE
Confidence 66643
No 266
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.50 E-value=3.4e-05 Score=65.87 Aligned_cols=174 Identities=15% Similarity=0.136 Sum_probs=98.5
Q ss_pred CCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeC--CCCEEEEeCCCCCceEEEEeCC
Q psy6442 5 GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAE--DKTVRLWDVSASAEVQKLEFGA 82 (231)
Q Consensus 5 ~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~--D~ti~iwd~~~~~~~~~~~~~~ 82 (231)
.++++++..+|+... +....+.+...+|+|||+.++ ++.+. +..|.++|+..++..+......
T Consensus 213 ~~Iyv~dl~tg~~~~-lt~~~g~~~~~~~SPDG~~la--------------~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~ 277 (419)
T PRK04043 213 PTLYKYNLYTGKKEK-IASSQGMLVVSDVSKDGSKLL--------------LTMAPKGQPDIYLYDTNTKTLTQITNYPG 277 (419)
T ss_pred CEEEEEECCCCcEEE-EecCCCcEEeeEECCCCCEEE--------------EEEccCCCcEEEEEECCCCcEEEcccCCC
Confidence 356666666665433 222445555667888876543 23333 3457777887776433222232
Q ss_pred cceeEEEccCCCEEEEEcC----CeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCC---------CeEEE
Q psy6442 83 VPNSLEISRDGTTITVTHG----SCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGED---------LKMYK 149 (231)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d---------~~i~~ 149 (231)
....-.|+|||+.++...+ ..|..+|....+..+...... .. . .++|++..++..... ..|++
T Consensus 278 ~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g~-~~-~--~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v 353 (419)
T PRK04043 278 IDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFHGK-NN-S--SVSTYKNYIVYSSRETNNEFGKNTFNLYL 353 (419)
T ss_pred ccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccCCC-cC-c--eECCCCCEEEEEEcCCCcccCCCCcEEEE
Confidence 2345679999987665432 267777877655533322111 11 2 348888877655432 36888
Q ss_pred EeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCC-Cc--EEEEeCCCCCe
Q psy6442 150 FDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSED-GT--LRLWQTNVGKT 199 (231)
Q Consensus 150 ~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d-~~--v~iwd~~~~~~ 199 (231)
.|+.++.. ..+... .......|+|||++++-.+.+ +. +.+.++.-.+.
T Consensus 354 ~d~~~g~~-~~LT~~-~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~~~ 404 (419)
T PRK04043 354 ISTNSDYI-RRLTAN-GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNYNKS 404 (419)
T ss_pred EECCCCCe-EECCCC-CCcCCeEECCCCCEEEEEEccCCcEEEEEEecCCCee
Confidence 89877754 333322 223357899999977665532 22 45666644433
No 267
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.48 E-value=8e-05 Score=62.73 Aligned_cols=145 Identities=12% Similarity=0.070 Sum_probs=91.6
Q ss_pred CEEEEEeCCCCEEEEeCCCCCceEEEEeCCc-----------ce-eEEEccCCCEEEEEcCCeEEEEECCCcceEEeeec
Q psy6442 53 TRLISCAEDKTVRLWDVSASAEVQKLEFGAV-----------PN-SLEISRDGTTITVTHGSCVTFLDANSLELIKEHKV 120 (231)
Q Consensus 53 ~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~-----------~~-~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 120 (231)
..++.+..++.+..+|..+++.+........ +. +..+ .++..++.+.++.+..+|..+.+.+.....
T Consensus 191 ~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~-~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~ 269 (377)
T TIGR03300 191 GGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVV-DGGQVYAVSYQGRVAALDLRSGRVLWKRDA 269 (377)
T ss_pred CEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEE-ECCEEEEEEcCCEEEEEECCCCcEEEeecc
Confidence 4677788889999999988876544332110 00 0111 133333445678899999888776655442
Q ss_pred cceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCC-CeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCe
Q psy6442 121 PAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFG-PIHCVKFSPDGELYASGSEDGTLRLWQTNVGKT 199 (231)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~-~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~ 199 (231)
.... .. ...+..+..++.++.++.+|..+++.+...+.... ...+... .+..+..++.+|.|.++|..+|+.
T Consensus 270 ~~~~---~p--~~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~ 342 (377)
T TIGR03300 270 SSYQ---GP--AVDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSF 342 (377)
T ss_pred CCcc---Cc--eEeCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECCCCCE
Confidence 2111 11 11234566677899999999999988765532111 1122122 356888899999999999999998
Q ss_pred eeeeec
Q psy6442 200 YGLWKC 205 (231)
Q Consensus 200 ~~~~~~ 205 (231)
...++.
T Consensus 343 ~~~~~~ 348 (377)
T TIGR03300 343 VARLKT 348 (377)
T ss_pred EEEEEc
Confidence 877764
No 268
>KOG1064|consensus
Probab=98.46 E-value=6.8e-07 Score=84.55 Aligned_cols=170 Identities=15% Similarity=0.236 Sum_probs=112.6
Q ss_pred CCcCCCceeeeccCCCeEeeee-cccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFE-GHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE 79 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~-gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~ 79 (231)
++.||.|+.|.=..++.+.+++ ....+|..+.|+.+|++ ...+..||-+-+|.... +....-+
T Consensus 2226 gs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk---------------~~i~d~dg~l~l~q~~p-k~~~s~q 2289 (2439)
T KOG1064|consen 2226 GSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNK---------------FGIVDGDGDLSLWQASP-KPYTSWQ 2289 (2439)
T ss_pred cCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCc---------------eeeeccCCceeecccCC-cceeccc
Confidence 5789999999988888888775 23478888888887654 45566789999998862 2222222
Q ss_pred -eCCcceeEEEccCCCEEEE---EcCCeEEEEECCCcce-EEeeecc-ceeEEEEEEecCCCCEEEEecCCCeEEEEeCC
Q psy6442 80 -FGAVPNSLEISRDGTTITV---THGSCVTFLDANSLEL-IKEHKVP-AQVHSASLLLNSERPIFVCGGEDLKMYKFDYS 153 (231)
Q Consensus 80 -~~~~~~~v~~~~~~~~~~~---~~~~~i~~~d~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~ 153 (231)
+.....+..|-... .+.. +.++.+.+||..-... .-.++.+ .... ++..-|..+++++|+.+|.+.+||.+
T Consensus 2290 chnk~~~Df~Fi~s~-~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT--~l~~~P~~qllisggr~G~v~l~D~r 2366 (2439)
T KOG1064|consen 2290 CHNKALSDFRFIGSL-LATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGAT--VLAYAPKHQLLISGGRKGEVCLFDIR 2366 (2439)
T ss_pred cCCccccceeeeehh-hhccccCCCCCcccchhcccCcccceeeeecCCCce--EEEEcCcceEEEecCCcCcEEEeehH
Confidence 22233344443311 1111 1345788898542211 1112222 2233 34457899999999999999999999
Q ss_pred CcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCe
Q psy6442 154 TGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKT 199 (231)
Q Consensus 154 ~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~ 199 (231)
..+++++++. +. ...+|++++..|.|+||++.....
T Consensus 2367 qrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~s~~~l 2402 (2439)
T KOG1064|consen 2367 QRQLRHTFQA---------LD-TREYFVTGSSEGNIKIWRLSEFGL 2402 (2439)
T ss_pred HHHHHHHhhh---------hh-hhheeeccCcccceEEEEccccch
Confidence 9888888764 33 567999999999999999876543
No 269
>KOG0974|consensus
Probab=98.46 E-value=6.5e-06 Score=74.22 Aligned_cols=140 Identities=13% Similarity=0.102 Sum_probs=97.6
Q ss_pred CCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcc--eeEE---EccCCCEEEEE-cCCeEEEEECCCcceEE-eeeccce
Q psy6442 51 NNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVP--NSLE---ISRDGTTITVT-HGSCVTFLDANSLELIK-EHKVPAQ 123 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~--~~v~---~~~~~~~~~~~-~~~~i~~~d~~~~~~~~-~~~~~~~ 123 (231)
.+++++....+..+-|||...+..+..+...... .++. .+++.-++..+ --+.+.+|+....+... .......
T Consensus 98 e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~ 177 (967)
T KOG0974|consen 98 ENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGS 177 (967)
T ss_pred hcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcceecccCCc
Confidence 5677888888999999999877666666554322 1222 22322233222 24678888876322211 1112223
Q ss_pred eEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceee-eccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 124 VHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIE-SFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 124 ~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~-~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
+ ..+..+-++..+++.++|..+++|++.+.+.+. +.-+|.+.|+.+.|.|+ .++|+++|-+.++|+.
T Consensus 178 i--F~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~ 245 (967)
T KOG0974|consen 178 I--FSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGV 245 (967)
T ss_pred e--EEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEec
Confidence 3 334447789999999999999999999887665 66789999999999999 9999999999999954
No 270
>KOG1409|consensus
Probab=98.46 E-value=4.3e-06 Score=67.11 Aligned_cols=169 Identities=15% Similarity=0.205 Sum_probs=99.5
Q ss_pred cCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE--eCCcceeEEEc
Q psy6442 13 DTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE--FGAVPNSLEIS 90 (231)
Q Consensus 13 ~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~--~~~~~~~v~~~ 90 (231)
..-.++-++++|.+.|.++.|.+. +..|.++..|..+.+||+.-++.+.... +...+..++..
T Consensus 185 ~~~~~i~~~~~h~~~~~~l~Wd~~---------------~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~ 249 (404)
T KOG1409|consen 185 NGCQLITTFNGHTGEVTCLKWDPG---------------QRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYA 249 (404)
T ss_pred cCCceEEEEcCcccceEEEEEcCC---------------CcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhh
Confidence 344678889999999999999885 5568999999999999997665543322 23444455444
Q ss_pred cCCCEEE-EEcCCeEEEEECCCcceEEe----------eecc----------cee------------EEEEEEecCCCCE
Q psy6442 91 RDGTTIT-VTHGSCVTFLDANSLELIKE----------HKVP----------AQV------------HSASLLLNSERPI 137 (231)
Q Consensus 91 ~~~~~~~-~~~~~~i~~~d~~~~~~~~~----------~~~~----------~~~------------~~~~~~~~~~~~~ 137 (231)
+-.+.++ +..++.|.+|+.+....... ...+ .+. ...+.....+...
T Consensus 250 ~~t~~l~S~~edg~i~~w~mn~~r~etpewl~s~~cQ~c~qpffwn~~~m~~~k~~glr~h~crkcg~avc~~c~s~~~~ 329 (404)
T KOG1409|consen 250 QHTRQLISCGEDGGIVVWNMNVKRVETPEWLDSDSCQKCNQPFFWNFRQMWDRKQLGLRQHHCRKCGKAVCGKCSSNRSS 329 (404)
T ss_pred hhheeeeeccCCCeEEEEeccceeecCccccccchhhhhCchHHHHHHHHHhhhhhhhhhhhhhhhhhhcCcccccCccc
Confidence 4444433 44578888888654322111 0000 000 0001111111112
Q ss_pred EEEecCCCeEEEEeCC-------CcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCC
Q psy6442 138 FVCGGEDLKMYKFDYS-------TGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNV 196 (231)
Q Consensus 138 ~~~g~~d~~i~~~d~~-------~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~ 196 (231)
...-+....+++.|.- +..++..+..-.-.|+.+.+..+-.+|+|++.|+.|+|||++.
T Consensus 330 ~p~mg~e~~vR~~~~c~~~i~~~~~t~LA~phei~tgItamhlqetlglLvTsG~~Rvi~iwd~~~ 395 (404)
T KOG1409|consen 330 YPTMGFEFSVRVCDSCYPTIKDEERTPLAIPHEIKTGITAMHLQETLGLLVTSGTDRVIKIWDVRS 395 (404)
T ss_pred cccccceeEEEEecccchhhhcCCCCccccccccccceeEEEhhhhccceeecCCceEEEEEechh
Confidence 2222333445554431 1223444432233588888988888999999999999999854
No 271
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.40 E-value=0.00032 Score=58.45 Aligned_cols=200 Identities=17% Similarity=0.237 Sum_probs=115.0
Q ss_pred ccccEEEEEECCC-CceeEecc-----cc---c-cccCCCEEEEEeC-CCCEEEEeCCCC-CceEE---EEe--------
Q psy6442 24 HKGCVWGVDINKD-ASKAASGA-----AD---F-QAKNNTRLISCAE-DKTVRLWDVSAS-AEVQK---LEF-------- 80 (231)
Q Consensus 24 H~~~V~~~~~~~~-~~~~~s~~-----~d---~-~~~~~~~l~s~s~-D~ti~iwd~~~~-~~~~~---~~~-------- 80 (231)
..+.|.++++.++ +.+-.... .. . ...+++.|+++.. +++|.++++... ..... +.+
T Consensus 60 ~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~ 139 (345)
T PF10282_consen 60 DSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPD 139 (345)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTT
T ss_pred CCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCccc
Confidence 5677888887776 43322111 11 0 1135677777764 899999999874 33222 211
Q ss_pred ---CCcceeEEEccCCCEEEEEc--CCeEEEEECCCcc--eE--EeeeccceeEEEEEEecCCCCEEEEe-cCCCeEEEE
Q psy6442 81 ---GAVPNSLEISRDGTTITVTH--GSCVTFLDANSLE--LI--KEHKVPAQVHSASLLLNSERPIFVCG-GEDLKMYKF 150 (231)
Q Consensus 81 ---~~~~~~v~~~~~~~~~~~~~--~~~i~~~d~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~g-~~d~~i~~~ 150 (231)
...+-.+.++|+++.+++.. .+.|.+++..... .. .....+......-+.++++++++... ..+.+|..+
T Consensus 140 rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~ 219 (345)
T PF10282_consen 140 RQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVF 219 (345)
T ss_dssp TTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEE
T ss_pred ccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEE
Confidence 13456899999999988864 3588888876543 22 22333322222223448888876554 446678887
Q ss_pred eCC--Ccce--ee---ecc-CCC--CCeeEEEEcCCCCEE-EEeeCCCcEEEEeC--CCCCe--eeeeeccCCcccCCCC
Q psy6442 151 DYS--TGAE--IE---SFK-GHF--GPIHCVKFSPDGELY-ASGSEDGTLRLWQT--NVGKT--YGLWKCIEGGLNNSLG 215 (231)
Q Consensus 151 d~~--~~~~--~~---~~~-~h~--~~V~~v~~spd~~~l-aS~s~d~~v~iwd~--~~~~~--~~~~~~~~~~~~~~~~ 215 (231)
++. .+.. ++ ++. +.. .....++++|||++| +|....++|.+|++ .+|+. .+.+. ..+..+-.+.
T Consensus 220 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~-~~G~~Pr~~~ 298 (345)
T PF10282_consen 220 DYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVP-TGGKFPRHFA 298 (345)
T ss_dssp EEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEE-ESSSSEEEEE
T ss_pred eecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEe-CCCCCccEEE
Confidence 776 3321 22 221 111 257889999999865 55567888999998 33443 22333 2566677788
Q ss_pred CCccccccc
Q psy6442 216 LDSSGHLNN 224 (231)
Q Consensus 216 ~~~~~~~~~ 224 (231)
++++|+++=
T Consensus 299 ~s~~g~~l~ 307 (345)
T PF10282_consen 299 FSPDGRYLY 307 (345)
T ss_dssp E-TTSSEEE
T ss_pred EeCCCCEEE
Confidence 888877653
No 272
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.39 E-value=0.00014 Score=56.88 Aligned_cols=145 Identities=19% Similarity=0.156 Sum_probs=89.6
Q ss_pred CCCEEEEEeCCCCEEEEeCCCCCceEEE-EeCCc----ceeEEEccCCCEEEEEc-CCeEEEEECCCcceEEeeecccee
Q psy6442 51 NNTRLISCAEDKTVRLWDVSASAEVQKL-EFGAV----PNSLEISRDGTTITVTH-GSCVTFLDANSLELIKEHKVPAQV 124 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iwd~~~~~~~~~~-~~~~~----~~~v~~~~~~~~~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~ 124 (231)
.+..++.+..|+.+..+|..+++.+... ....+ .........+..+++.. ++.+..+|..+++.+.......+.
T Consensus 75 ~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~ 154 (238)
T PF13360_consen 75 DGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPR 154 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-
T ss_pred cccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCC
Confidence 4566777778899999999999988774 32211 11222333355555554 789999999998887766543211
Q ss_pred --E--------EEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 125 --H--------SASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 125 --~--------~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
. ..... ..++ .+...+.++.+..+|..+++.+.... ...+.. ...+++..|..++.++.|..||.
T Consensus 155 ~~~~~~~~~~~~~~~~-~~~~-~v~~~~~~g~~~~~d~~tg~~~w~~~--~~~~~~-~~~~~~~~l~~~~~~~~l~~~d~ 229 (238)
T PF13360_consen 155 GSSPISSFSDINGSPV-ISDG-RVYVSSGDGRVVAVDLATGEKLWSKP--ISGIYS-LPSVDGGTLYVTSSDGRLYALDL 229 (238)
T ss_dssp SS--EEEETTEEEEEE-CCTT-EEEEECCTSSEEEEETTTTEEEEEEC--SS-ECE-CEECCCTEEEEEETTTEEEEEET
T ss_pred CCcceeeecccccceE-EECC-EEEEEcCCCeEEEEECCCCCEEEEec--CCCccC-CceeeCCEEEEEeCCCEEEEEEC
Confidence 0 11222 2234 45555556654444999988664333 222222 14466777777779999999999
Q ss_pred CCCCee
Q psy6442 195 NVGKTY 200 (231)
Q Consensus 195 ~~~~~~ 200 (231)
++|+..
T Consensus 230 ~tG~~~ 235 (238)
T PF13360_consen 230 KTGKVV 235 (238)
T ss_dssp TTTEEE
T ss_pred CCCCEE
Confidence 999854
No 273
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.38 E-value=6.4e-05 Score=63.30 Aligned_cols=148 Identities=18% Similarity=0.136 Sum_probs=88.3
Q ss_pred CCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccceeEE----
Q psy6442 51 NNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHS---- 126 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~---- 126 (231)
++..++.++.|+.+..+|..+++.+........+.+.....++..++...++.+..+|..+++.+..++...+...
T Consensus 104 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~ 183 (377)
T TIGR03300 104 DGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSPPLVANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGS 183 (377)
T ss_pred cCCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecCCEEECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCC
Confidence 4667888889999999999999887666554433221112234444444577899999988887766554322110
Q ss_pred EEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCC-----CC--CeeEEEEcC--CCCEEEEeeCCCcEEEEeCCCC
Q psy6442 127 ASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGH-----FG--PIHCVKFSP--DGELYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 127 ~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h-----~~--~V~~v~~sp--d~~~laS~s~d~~v~iwd~~~~ 197 (231)
...... + ..++.+..++.++.+|.++|+.+.+..-. .. ....+.-+| .+..+..++.++.+..||..+|
T Consensus 184 ~sp~~~-~-~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG 261 (377)
T TIGR03300 184 ASPVIA-D-GGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSG 261 (377)
T ss_pred CCCEEE-C-CEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCC
Confidence 000111 2 35667778889999999888776543210 00 000011112 2445666777888888888888
Q ss_pred Cee
Q psy6442 198 KTY 200 (231)
Q Consensus 198 ~~~ 200 (231)
+..
T Consensus 262 ~~~ 264 (377)
T TIGR03300 262 RVL 264 (377)
T ss_pred cEE
Confidence 744
No 274
>KOG4714|consensus
Probab=98.36 E-value=6.7e-06 Score=63.76 Aligned_cols=144 Identities=19% Similarity=0.236 Sum_probs=86.0
Q ss_pred CCCEEEEEeCCCCEEEEeCCCCCce-EEEEeC-CcceeEEEccCCCEEEEEcC------CeEEEEECCCcceEEeeec-c
Q psy6442 51 NNTRLISCAEDKTVRLWDVSASAEV-QKLEFG-AVPNSLEISRDGTTITVTHG------SCVTFLDANSLELIKEHKV-P 121 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iwd~~~~~~~-~~~~~~-~~~~~v~~~~~~~~~~~~~~------~~i~~~d~~~~~~~~~~~~-~ 121 (231)
.++.++++..||.+-+.+.+.-..+ ..++.. ....+.++...+..+....- +....|+.+....+..... .
T Consensus 100 ~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~ 179 (319)
T KOG4714|consen 100 TDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKAL 179 (319)
T ss_pred cCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeeccccccccccccccc
Confidence 4678999999999999987641111 111100 11122233333333332211 1222333333222111111 1
Q ss_pred ceeEEEEEEecCC-CCEEEEecCCCeEEEEeCCCccee-eeccCCCCCeeEEEEcCC-CCEEEEeeCCCcEEEEeCCC
Q psy6442 122 AQVHSASLLLNSE-RPIFVCGGEDLKMYKFDYSTGAEI-ESFKGHFGPIHCVKFSPD-GELYASGSEDGTLRLWQTNV 196 (231)
Q Consensus 122 ~~~~~~~~~~~~~-~~~~~~g~~d~~i~~~d~~~~~~~-~~~~~h~~~V~~v~~spd-~~~laS~s~d~~v~iwd~~~ 196 (231)
..+.+.+. +|. ..++++|++|+.+-+||.+....+ ..+..|+++++.+-|+|. +..|.++++||.+--||..+
T Consensus 180 ~~v~~l~~--hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 180 DAVTALCS--HPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred ccchhhhC--CcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 12333332 444 345778899999999999877544 557899999999999994 67999999999999999864
No 275
>KOG4190|consensus
Probab=98.32 E-value=2.8e-06 Score=72.27 Aligned_cols=181 Identities=17% Similarity=0.215 Sum_probs=116.6
Q ss_pred CCcCCCceeeecc-CC------CeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCC
Q psy6442 1 MCVDGKPMLRQGD-TG------DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASA 73 (231)
Q Consensus 1 ~~~d~~~~~~~~~-~g------~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~ 73 (231)
++.|.+|+||+.+ .| -+--+|..|+.+|..+.|-.+- ..+ +|.|+.|.+||.-.++
T Consensus 753 ASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~l---------------r~i--~ScD~giHlWDPFigr 815 (1034)
T KOG4190|consen 753 ASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADL---------------RSI--ASCDGGIHLWDPFIGR 815 (1034)
T ss_pred ccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeecc---------------cee--eeccCcceeecccccc
Confidence 4789999999973 22 2445678999999999876542 233 4569999999988777
Q ss_pred ceEEEEeC---CcceeEEEccC--CCEEEEE--cCCeEEEEECCCcceEEeee---ccce-eEEEEEEecCCCCEEEEec
Q psy6442 74 EVQKLEFG---AVPNSLEISRD--GTTITVT--HGSCVTFLDANSLELIKEHK---VPAQ-VHSASLLLNSERPIFVCGG 142 (231)
Q Consensus 74 ~~~~~~~~---~~~~~v~~~~~--~~~~~~~--~~~~i~~~d~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~g~ 142 (231)
.+..+... .....+..-++ ...+++. ..++++++|.+..+..-+.+ .+.+ ...-++...+.|..++.+-
T Consensus 816 ~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~L 895 (1034)
T KOG4190|consen 816 LLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAAL 895 (1034)
T ss_pred hhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccCcchhhHHh
Confidence 66544321 22223333333 3344433 45789999988765543332 2322 1112233367788889998
Q ss_pred CCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEE-EeCCCCCe
Q psy6442 143 EDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRL-WQTNVGKT 199 (231)
Q Consensus 143 ~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~i-wd~~~~~~ 199 (231)
..|+|-+.|.++|..+....-.......++ .|..+.|++...|.++.+ |..-.|..
T Consensus 896 SnGci~~LDaR~G~vINswrpmecdllqla-apsdq~L~~saldHslaVnWhaldgim 952 (1034)
T KOG4190|consen 896 SNGCIAILDARNGKVINSWRPMECDLLQLA-APSDQALAQSALDHSLAVNWHALDGIM 952 (1034)
T ss_pred cCCcEEEEecCCCceeccCCcccchhhhhc-CchhHHHHhhcccceeEeeehhcCCee
Confidence 999999999999987765433322233333 366678888888999998 98776653
No 276
>KOG1409|consensus
Probab=98.31 E-value=2.3e-05 Score=63.01 Aligned_cols=70 Identities=17% Similarity=0.378 Sum_probs=60.2
Q ss_pred EecCCCCEEEEecCCCeEEEEeCCCcc-eeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCe
Q psy6442 130 LLNSERPIFVCGGEDLKMYKFDYSTGA-EIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKT 199 (231)
Q Consensus 130 ~~~~~~~~~~~g~~d~~i~~~d~~~~~-~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~ 199 (231)
.+.+...++.+|..|..+.+||+.-.+ ....+.+|...|..+.+-+.-+.|.|++.||-|.+||....+.
T Consensus 204 ~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~r~ 274 (404)
T KOG1409|consen 204 KWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVKRV 274 (404)
T ss_pred EEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccceee
Confidence 347788889999999999999996543 4567889999999999999999999999999999999877654
No 277
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.27 E-value=0.001 Score=54.03 Aligned_cols=206 Identities=13% Similarity=0.143 Sum_probs=121.8
Q ss_pred CCceeeecc--CCCe-EeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeC---CCCEEEEeCC--CCCceE
Q psy6442 5 GKPMLRQGD--TGDW-IGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAE---DKTVRLWDVS--ASAEVQ 76 (231)
Q Consensus 5 ~~~~~~~~~--~g~~-i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~---D~ti~iwd~~--~~~~~~ 76 (231)
..+++|+.+ +|++ +-.+-.+.+...-+.|+|+.+. |+++.. ++.|--|.+. +|+...
T Consensus 16 ~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~---------------LY~v~~~~~~ggvaay~iD~~~G~Lt~ 80 (346)
T COG2706 16 QGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRH---------------LYVVNEPGEEGGVAAYRIDPDDGRLTF 80 (346)
T ss_pred CceEEEEEeCcccccchhhhccccCCCceEEECCCCCE---------------EEEEEecCCcCcEEEEEEcCCCCeEEE
Confidence 445666654 3332 1123345666667777776554 444433 3555555544 344332
Q ss_pred EEE---eCCcceeEEEccCCCEEEEEc--CCeEEEEECCCcceE----Eeeeccc--------eeEEEEEEecCCCCEEE
Q psy6442 77 KLE---FGAVPNSLEISRDGTTITVTH--GSCVTFLDANSLELI----KEHKVPA--------QVHSASLLLNSERPIFV 139 (231)
Q Consensus 77 ~~~---~~~~~~~v~~~~~~~~~~~~~--~~~i~~~d~~~~~~~----~~~~~~~--------~~~~~~~~~~~~~~~~~ 139 (231)
.-+ .+..+..++++++++.++++. .+.+.++-+.....+ ....... ..++-.....|++++++
T Consensus 81 ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~ 160 (346)
T COG2706 81 LNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLV 160 (346)
T ss_pred eeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEE
Confidence 221 234568999999999888763 468888876542221 1111111 11122233488998877
Q ss_pred EecCC-CeEEEEeCCCcceeeecc---CCCCCeeEEEEcCCCCEE-EEeeCCCcEEEEeCCCC-Cee---eee-----ec
Q psy6442 140 CGGED-LKMYKFDYSTGAEIESFK---GHFGPIHCVKFSPDGELY-ASGSEDGTLRLWQTNVG-KTY---GLW-----KC 205 (231)
Q Consensus 140 ~g~~d-~~i~~~d~~~~~~~~~~~---~h~~~V~~v~~spd~~~l-aS~s~d~~v~iwd~~~~-~~~---~~~-----~~ 205 (231)
+.+-. -+|.+|++..|.+...-+ .-.+-.+.|.|+|++++. +.+.-+++|.+|..... ..+ |.. ..
T Consensus 161 v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF 240 (346)
T COG2706 161 VPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDF 240 (346)
T ss_pred EeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCcccc
Confidence 76543 468888888776432211 233456889999999864 44567999999998773 222 222 23
Q ss_pred cCCcccCCCCCCccccccce
Q psy6442 206 IEGGLNNSLGLDSSGHLNNV 225 (231)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~ 225 (231)
..+.+++.|-+.++|.++-+
T Consensus 241 ~g~~~~aaIhis~dGrFLYa 260 (346)
T COG2706 241 TGTNWAAAIHISPDGRFLYA 260 (346)
T ss_pred CCCCceeEEEECCCCCEEEE
Confidence 34677888888999888754
No 278
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.26 E-value=1.1e-05 Score=64.29 Aligned_cols=113 Identities=21% Similarity=0.316 Sum_probs=70.0
Q ss_pred cceeEEEccCCCEEEEEcCCeEEEEECCCcce------EEeeecc--ce-eEEEEEEecCC-CCEEEEecCCCeEEEEeC
Q psy6442 83 VPNSLEISRDGTTITVTHGSCVTFLDANSLEL------IKEHKVP--AQ-VHSASLLLNSE-RPIFVCGGEDLKMYKFDY 152 (231)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~------~~~~~~~--~~-~~~~~~~~~~~-~~~~~~g~~d~~i~~~d~ 152 (231)
.++++++..|..+++.+.+=.|.+|.+.-... ++++... .. +.+..+ +|. ...+-..+..|.|++.|+
T Consensus 174 hiNSiS~NsD~et~lSaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeF--hp~~cn~fmYSsSkG~Ikl~Dl 251 (460)
T COG5170 174 HINSISFNSDKETLLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEF--HPEMCNVFMYSSSKGEIKLNDL 251 (460)
T ss_pred EeeeeeecCchheeeeccceeeeeccccccCCceEEEeccCccHHHHHHHHhhccc--CHhHcceEEEecCCCcEEehhh
Confidence 45677888888877766677888887653221 1111111 00 111112 332 234455677899999998
Q ss_pred CCccee----------------eeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCC
Q psy6442 153 STGAEI----------------ESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 153 ~~~~~~----------------~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~ 198 (231)
+...+. .-+++-...|.++.|+|+|+++++-+. -+|+|||++..+
T Consensus 252 Rq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k 312 (460)
T COG5170 252 RQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAK 312 (460)
T ss_pred hhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEeccccc
Confidence 754321 012334456889999999999998776 569999986554
No 279
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.25 E-value=0.0012 Score=53.43 Aligned_cols=184 Identities=19% Similarity=0.319 Sum_probs=105.9
Q ss_pred ceeeeccCCCeEeeeecccccEEE--EEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCC-CCceEEEEe-CC
Q psy6442 7 PMLRQGDTGDWIGTFEGHKGCVWG--VDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSA-SAEVQKLEF-GA 82 (231)
Q Consensus 7 ~~~~~~~~g~~i~~l~gH~~~V~~--~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~-~~~~~~~~~-~~ 82 (231)
..++|..+|+.++.+..-.+.-+- -.|++||++|.+...|+. ...|.|-|||... -+.+..+.. +-
T Consensus 30 ~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~----------~g~G~IgVyd~~~~~~ri~E~~s~GI 99 (305)
T PF07433_consen 30 ALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYE----------TGRGVIGVYDAARGYRRIGEFPSHGI 99 (305)
T ss_pred EEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccC----------CCcEEEEEEECcCCcEEEeEecCCCc
Confidence 457788888877766543333221 468888888777665443 2357788999982 233333332 23
Q ss_pred cceeEEEccCCCEEEEEcCC-------------------eEEEEECCCcceEEeeeccceeEEEE---EEecCCCCEEEE
Q psy6442 83 VPNSLEISRDGTTITVTHGS-------------------CVTFLDANSLELIKEHKVPAQVHSAS---LLLNSERPIFVC 140 (231)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~~~-------------------~i~~~d~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 140 (231)
-+-.+.+.||+..++++.++ .+.+.|..+.+.+.....+...+..+ +...+++..+..
T Consensus 100 GPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a 179 (305)
T PF07433_consen 100 GPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFA 179 (305)
T ss_pred ChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEE
Confidence 46678899999887765433 23345556666666555432211111 223555554433
Q ss_pred ecCCC-------eEEEEeCCCcceeeec-------cCCCCCeeEEEEcCCCCEEEEee-CCCcEEEEeCCCCCeeee
Q psy6442 141 GGEDL-------KMYKFDYSTGAEIESF-------KGHFGPIHCVKFSPDGELYASGS-EDGTLRLWQTNVGKTYGL 202 (231)
Q Consensus 141 g~~d~-------~i~~~d~~~~~~~~~~-------~~h~~~V~~v~~spd~~~laS~s-~d~~v~iwd~~~~~~~~~ 202 (231)
.-.++ -+.+++. ++.+..+ ..-...+-+|++++++.+++..| .-+.+.+||..+++....
T Consensus 180 ~Q~qg~~~~~~PLva~~~~--g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~ 254 (305)
T PF07433_consen 180 MQYQGDPGDAPPLVALHRR--GGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGS 254 (305)
T ss_pred EecCCCCCccCCeEEEEcC--CCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeec
Confidence 32221 1222222 2211111 12335688999999998775554 678889999999987644
No 280
>KOG2066|consensus
Probab=98.24 E-value=0.00014 Score=64.53 Aligned_cols=170 Identities=11% Similarity=0.178 Sum_probs=109.1
Q ss_pred CeEeeeecccccEEEEEECCCC--ceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccC-
Q psy6442 16 DWIGTFEGHKGCVWGVDINKDA--SKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRD- 92 (231)
Q Consensus 16 ~~i~~l~gH~~~V~~~~~~~~~--~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~- 92 (231)
+.+. |.-|.|.|.-.++.... +...+++ ...|.+++|||.||+|.|-.+.+.+......++.++.+++++|+
T Consensus 50 ~~~~-~GtH~g~v~~~~~~~~~~~~~~~s~~----~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df~rpiksial~Pd~ 124 (846)
T KOG2066|consen 50 KFFA-LGTHRGAVYLTTCQGNPKTNFDHSSS----ILEGEYVASCSDDGKVVIGSLFTDDEITQYDFKRPIKSIALHPDF 124 (846)
T ss_pred ceee-eccccceEEEEecCCccccccccccc----ccCCceEEEecCCCcEEEeeccCCccceeEecCCcceeEEeccch
Confidence 3443 67899998877665432 2222222 34688999999999999999999888888889999999999998
Q ss_pred ----CCEEEEEcCCeEEEEECCC---cceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCC
Q psy6442 93 ----GTTITVTHGSCVTFLDANS---LELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHF 165 (231)
Q Consensus 93 ----~~~~~~~~~~~i~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~ 165 (231)
.+.++++....+.++..+. ...+..+....++.+++| .+.++|-++.+| +++||..+++.+..++-..
T Consensus 125 ~~~~sk~fv~GG~aglvL~er~wlgnk~~v~l~~~eG~I~~i~W----~g~lIAWand~G-v~vyd~~~~~~l~~i~~p~ 199 (846)
T KOG2066|consen 125 SRQQSKQFVSGGMAGLVLSERNWLGNKDSVVLSEGEGPIHSIKW----RGNLIAWANDDG-VKVYDTPTRQRLTNIPPPS 199 (846)
T ss_pred hhhhhhheeecCcceEEEehhhhhcCccceeeecCccceEEEEe----cCcEEEEecCCC-cEEEeccccceeeccCCCC
Confidence 1223333322255554332 222223344556666666 566666666544 6889988877665543222
Q ss_pred CC------eeEEEEcCCCCEEEEeeCCCcEEEEeCCCC
Q psy6442 166 GP------IHCVKFSPDGELYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 166 ~~------V~~v~~spd~~~laS~s~d~~v~iwd~~~~ 197 (231)
.. ...+.|.++.++++ +...+|+|..++.+
T Consensus 200 ~~~R~e~fpphl~W~~~~~LVI--GW~d~v~i~~I~~~ 235 (846)
T KOG2066|consen 200 QSVRPELFPPHLHWQDEDRLVI--GWGDSVKICSIKKR 235 (846)
T ss_pred CCCCcccCCCceEecCCCeEEE--ecCCeEEEEEEecc
Confidence 22 34677888766543 45567998888743
No 281
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.24 E-value=0.0013 Score=51.94 Aligned_cols=41 Identities=32% Similarity=0.464 Sum_probs=37.0
Q ss_pred CCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeec
Q psy6442 165 FGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKC 205 (231)
Q Consensus 165 ~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~ 205 (231)
..-|..|..||||.+||+...+|.|.||++=+-+....|+-
T Consensus 229 ~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~ 269 (282)
T PF15492_consen 229 QDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQ 269 (282)
T ss_pred CCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccch
Confidence 45689999999999999999999999999988888888853
No 282
>KOG2041|consensus
Probab=98.21 E-value=2.5e-05 Score=68.50 Aligned_cols=184 Identities=17% Similarity=0.140 Sum_probs=108.6
Q ss_pred CCcCCCceeeeccCC---------------CeEeeeecccccEEEEEECCCCceeEecccccccc---------------
Q psy6442 1 MCVDGKPMLRQGDTG---------------DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK--------------- 50 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g---------------~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~--------------- 50 (231)
+|.||.+++....|. .--++|.||.+.|.-+.|+...+++.++..+..+.
T Consensus 32 gG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiN 111 (1189)
T KOG2041|consen 32 GGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMIN 111 (1189)
T ss_pred ccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhh
Confidence 467887777765432 11245789999999999999988888876653221
Q ss_pred --------------CCCEEEEEeCCCCEEEEeCCCCCceEEEEe-CCcceeEEEccCCCEEEEE-cCCeEEEEECCCc--
Q psy6442 51 --------------NNTRLISCAEDKTVRLWDVSASAEVQKLEF-GAVPNSLEISRDGTTITVT-HGSCVTFLDANSL-- 112 (231)
Q Consensus 51 --------------~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~-- 112 (231)
+|++++..-.||.|.+=.+...+. .-.++ +.....+.|++|...+... ..+.++++|-...
T Consensus 112 nRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRI-wgKeLkg~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~ 190 (1189)
T KOG2041|consen 112 NRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRI-WGKELKGQLLAHVLWSEDLEQALFKKANGETHLYDNQGNFE 190 (1189)
T ss_pred CcCccEEEEEEEcCCCcEEEEEEccCCEEEEeecccee-cchhcchheccceeecccHHHHHhhhcCCcEEEecccccHH
Confidence 556666666666666544433221 11111 2334578889887765433 3567777764321
Q ss_pred -----ce-EEe---e-eccceeEEEEEE------ecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCC
Q psy6442 113 -----EL-IKE---H-KVPAQVHSASLL------LNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPD 176 (231)
Q Consensus 113 -----~~-~~~---~-~~~~~~~~~~~~------~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd 176 (231)
.+ +.. + ..+.++-.+.+. ..|+.+.++.+...|++.+..-......-.+. -.-.|..+.|+|+
T Consensus 191 ~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~d-tgm~~vgakWnh~ 269 (1189)
T KOG2041|consen 191 RKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPVVVD-TGMKIVGAKWNHN 269 (1189)
T ss_pred HhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCCCeEEe-cccEeecceecCC
Confidence 01 000 0 011122222221 24688889999999988776443322222221 1245788999999
Q ss_pred CCEEEEeeCC
Q psy6442 177 GELYASGSED 186 (231)
Q Consensus 177 ~~~laS~s~d 186 (231)
|..||.|+.|
T Consensus 270 G~vLAvcG~~ 279 (1189)
T KOG2041|consen 270 GAVLAVCGND 279 (1189)
T ss_pred CcEEEEccCc
Confidence 9999999854
No 283
>KOG1275|consensus
Probab=98.20 E-value=8.5e-06 Score=72.88 Aligned_cols=142 Identities=17% Similarity=0.230 Sum_probs=94.2
Q ss_pred CcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeC
Q psy6442 2 CVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFG 81 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~ 81 (231)
..-|+|.|.|+++.+-++++..|++.|..++.. |++|++.+... +...=..|.-|++||++.-+.+.-+.+.
T Consensus 194 ~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv~--GNlLitCG~S~------R~~~l~~D~FvkVYDLRmmral~PI~~~ 265 (1118)
T KOG1275|consen 194 DTRGTVFLRDPNSFETIHTFDAHSGSISDFDVQ--GNLLITCGYSM------RRYNLAMDPFVKVYDLRMMRALSPIQFP 265 (1118)
T ss_pred cccceEEeecCCcCceeeeeeccccceeeeecc--CCeEEEeeccc------ccccccccchhhhhhhhhhhccCCcccc
Confidence 457999999999999999999999999877654 55554443211 1111224778999999887776666665
Q ss_pred CcceeEEEccCCC--EEEEEcCCeEEEEECCCcc-e--EEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEe
Q psy6442 82 AVPNSLEISRDGT--TITVTHGSCVTFLDANSLE-L--IKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFD 151 (231)
Q Consensus 82 ~~~~~v~~~~~~~--~~~~~~~~~i~~~d~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d 151 (231)
..+.-+.+.|.-. .++++..+...+.|..+.. + -..+-.+.......+..++.+..++.|..++.|.+|-
T Consensus 266 ~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 266 YGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred cCchhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 5555566666533 3445667777888733211 1 1111112222234566688999999999999999996
No 284
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.18 E-value=5.6e-06 Score=44.26 Aligned_cols=38 Identities=50% Similarity=1.017 Sum_probs=33.6
Q ss_pred ceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEe
Q psy6442 156 AEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQ 193 (231)
Q Consensus 156 ~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd 193 (231)
..+..+..|...|.++.|+|++.++++++.|+.+++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 34566678899999999999999999999999999996
No 285
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.17 E-value=0.0015 Score=62.05 Aligned_cols=148 Identities=11% Similarity=0.096 Sum_probs=89.5
Q ss_pred CCEEEEEeC-CCCEEEEeCCCCCceEEEEe------------------CCcceeEEEccCCCEEEEE--cCCeEEEEECC
Q psy6442 52 NTRLISCAE-DKTVRLWDVSASAEVQKLEF------------------GAVPNSLEISRDGTTITVT--HGSCVTFLDAN 110 (231)
Q Consensus 52 ~~~l~s~s~-D~ti~iwd~~~~~~~~~~~~------------------~~~~~~v~~~~~~~~~~~~--~~~~i~~~d~~ 110 (231)
+..|+.+.. .+.|+++|..++.. .++.- -..+..++++|++..++++ .+..|.+||..
T Consensus 635 gn~LYVaDt~n~~Ir~id~~~~~V-~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~ 713 (1057)
T PLN02919 635 KNLLYVADTENHALREIDFVNETV-RTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNIS 713 (1057)
T ss_pred CCEEEEEeCCCceEEEEecCCCEE-EEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECC
Confidence 444555544 46788888766542 22210 1245789999966665554 35688888876
Q ss_pred CcceEEeee--------cc-----ceeEEEEEEecCCCC-EEEEecCCCeEEEEeCCCcceeee-------------ccC
Q psy6442 111 SLELIKEHK--------VP-----AQVHSASLLLNSERP-IFVCGGEDLKMYKFDYSTGAEIES-------------FKG 163 (231)
Q Consensus 111 ~~~~~~~~~--------~~-----~~~~~~~~~~~~~~~-~~~~g~~d~~i~~~d~~~~~~~~~-------------~~~ 163 (231)
+........ .. .-.....+.+++++. +.++-..+.+|++||+.++..... +-.
T Consensus 714 ~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~ 793 (1057)
T PLN02919 714 DGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGD 793 (1057)
T ss_pred CCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccC
Confidence 543321100 00 000111233467776 556667778999999876542110 000
Q ss_pred --------CCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCee
Q psy6442 164 --------HFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 164 --------h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~ 200 (231)
.-.....++++|+|+++++-+.++.|++||..++...
T Consensus 794 ~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~ 838 (1057)
T PLN02919 794 HDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVT 838 (1057)
T ss_pred CCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEE
Confidence 0113468999999999999999999999999887654
No 286
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.16 E-value=7.5e-05 Score=64.14 Aligned_cols=82 Identities=18% Similarity=0.321 Sum_probs=60.8
Q ss_pred EEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 115 IKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
+.....+.+....+...+|+...++.|..|+.|.+||...+... +..+.-.++.++|+|+|.+++.|+..|.+.+||.
T Consensus 251 vsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~--~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ 328 (545)
T PF11768_consen 251 VSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTL--LAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDM 328 (545)
T ss_pred EEEEEEecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeee--eeeecccceEEEEcCCCcEEEEEcCCceEEEEEe
Confidence 33333343333344455899999999999999999998665332 2234456788999999999999999999999998
Q ss_pred CCCC
Q psy6442 195 NVGK 198 (231)
Q Consensus 195 ~~~~ 198 (231)
....
T Consensus 329 ALsp 332 (545)
T PF11768_consen 329 ALSP 332 (545)
T ss_pred ecCc
Confidence 5443
No 287
>KOG3914|consensus
Probab=98.11 E-value=4.8e-05 Score=62.22 Aligned_cols=103 Identities=12% Similarity=0.153 Sum_probs=69.0
Q ss_pred EEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEc-CCeEEEEECCCcceEEeeeccc--eeEEEEEEecC
Q psy6442 57 SCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH-GSCVTFLDANSLELIKEHKVPA--QVHSASLLLNS 133 (231)
Q Consensus 57 s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~ 133 (231)
.++....+.+|....+.+...+-+-..+..|+++||++.++.++ +..|++-.......+..+-... -+..+++ .
T Consensus 127 kagD~~~~di~s~~~~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl---~ 203 (390)
T KOG3914|consen 127 KAGDVYSFDILSADSGRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISL---T 203 (390)
T ss_pred ecCCceeeeeecccccCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeee---c
Confidence 44555666677766666666666778899999999999887764 6677775443333333332211 1222222 3
Q ss_pred CCCEEEEecCCCeEEEEeCCCcceeeecc
Q psy6442 134 ERPIFVCGGEDLKMYKFDYSTGAEIESFK 162 (231)
Q Consensus 134 ~~~~~~~g~~d~~i~~~d~~~~~~~~~~~ 162 (231)
++..+++++.|+++++||..+++.++++.
T Consensus 204 ~~~~LlS~sGD~tlr~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 204 DNYLLLSGSGDKTLRLWDITSGKLLDTCD 232 (390)
T ss_pred cCceeeecCCCCcEEEEecccCCcccccc
Confidence 45558999999999999999999887654
No 288
>KOG4532|consensus
Probab=98.09 E-value=0.00033 Score=54.88 Aligned_cols=162 Identities=10% Similarity=0.063 Sum_probs=97.5
Q ss_pred CCCCceeEecccccccc----CCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEcc-----CCCEEEEEcCCeE
Q psy6442 34 NKDASKAASGAADFQAK----NNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISR-----DGTTITVTHGSCV 104 (231)
Q Consensus 34 ~~~~~~~~s~~~d~~~~----~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~-----~~~~~~~~~~~~i 104 (231)
+|.+.....-+.+|.+. ....|+.+|.-|..++|...+.+....+. ....+.+.+.. ....++++.+-++
T Consensus 62 N~~~iv~~y~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~~c-d~snn~v~~~~r~cd~~~~~~i~sndht~ 140 (344)
T KOG4532|consen 62 NPKGIVEFYTGMTFTPGSFINKCVTLADGGASGQFDLFACNTNDGHLYQC-DVSNNDVTLVKRYCDLKFPLNIASNDHTG 140 (344)
T ss_pred CchhhEEeeecccccchHhhccccEEEeccccceeeeecccCcccceeee-cccccchhhhhhhcccccceeeccCCcce
Confidence 34444444455566543 56789999999999999998765443322 12222222111 1123344555556
Q ss_pred EEEECCCcceE-EeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCC-ccee-eeccC-CCCCeeEEEEcCCCCEE
Q psy6442 105 TFLDANSLELI-KEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYST-GAEI-ESFKG-HFGPIHCVKFSPDGELY 180 (231)
Q Consensus 105 ~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~-~~~~-~~~~~-h~~~V~~v~~spd~~~l 180 (231)
++++..-.... ..+....... ....+++++++++.+....|..|.+.. ++.+ .+..+ ....=.+.+|+.....+
T Consensus 141 k~~~~~~~s~~~~~h~~~~~~n--s~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~F 218 (344)
T KOG4532|consen 141 KTMVVSGDSNKFAVHNQNLTQN--SLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQF 218 (344)
T ss_pred eEEEEecCcccceeecccccee--eeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceE
Confidence 65554322111 1111112223 344588999999999989999988754 3332 22222 23344678899999999
Q ss_pred EEeeCCCcEEEEeCCCCC
Q psy6442 181 ASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 181 aS~s~d~~v~iwd~~~~~ 198 (231)
|.+..||++.|||++.-.
T Consensus 219 Av~~Qdg~~~I~DVR~~~ 236 (344)
T KOG4532|consen 219 AVVFQDGTCAIYDVRNMA 236 (344)
T ss_pred EEEecCCcEEEEEecccc
Confidence 999999999999998654
No 289
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.06 E-value=0.00073 Score=57.22 Aligned_cols=187 Identities=12% Similarity=0.160 Sum_probs=113.1
Q ss_pred CcCCCceeeeccCCCeEee--eecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE
Q psy6442 2 CVDGKPMLRQGDTGDWIGT--FEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE 79 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~--l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~ 79 (231)
+.++.+++|....++-+.+ |..-++ ..+.|++.|+++.--..--. ..++... ...++.|++++...+.-...
T Consensus 199 ~kpa~~~i~sIp~~s~l~tk~lfk~~~--~qLkW~~~g~~ll~l~~t~~-ksnKsyf---gesnLyl~~~~e~~i~V~~~ 272 (561)
T COG5354 199 NKPAMVRILSIPKNSVLVTKNLFKVSG--VQLKWQVLGKYLLVLVMTHT-KSNKSYF---GESNLYLLRITERSIPVEKD 272 (561)
T ss_pred CCCcEEEEEEccCCCeeeeeeeEeecc--cEEEEecCCceEEEEEEEee-eccccee---ccceEEEEeecccccceecc
Confidence 4567788888776665544 332222 46778888776543221111 1111111 12467788887555544445
Q ss_pred eCCcceeEEEccCCCEEEEEc---CCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecC---CCeEEEEeCC
Q psy6442 80 FGAVPNSLEISRDGTTITVTH---GSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGE---DLKMYKFDYS 153 (231)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---d~~i~~~d~~ 153 (231)
..+++.+.+|.|.+..+.+.. ...+.++|.+.. ++..-.+.+-+. ..++|..+.++.++- .+.+.+||..
T Consensus 273 ~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N--l~~~~Pe~~rNT--~~fsp~~r~il~agF~nl~gni~i~~~~ 348 (561)
T COG5354 273 LKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN--LRFYFPEQKRNT--IFFSPHERYILFAGFDNLQGNIEIFDPA 348 (561)
T ss_pred ccccceeeeecccCCceeEEecccccceeecccccc--eEEecCCccccc--ccccCcccEEEEecCCccccceEEeccC
Confidence 578899999999988665432 356777777654 222222222222 234777777777554 4789999987
Q ss_pred Ccceee-eccCCCCCeeEEEEcCCCCEEEEee------CCCcEEEEeCCCCCee
Q psy6442 154 TGAEIE-SFKGHFGPIHCVKFSPDGELYASGS------EDGTLRLWQTNVGKTY 200 (231)
Q Consensus 154 ~~~~~~-~~~~h~~~V~~v~~spd~~~laS~s------~d~~v~iwd~~~~~~~ 200 (231)
...... .+.+-.. .-+.|+||++++.+.. .|..|+|||+...+.+
T Consensus 349 ~rf~~~~~~~~~n~--s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~~f 400 (561)
T COG5354 349 GRFKVAGAFNGLNT--SYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAKVF 400 (561)
T ss_pred CceEEEEEeecCCc--eEeeccCCceEEEecCCCcccccCcceEEEEecCchhh
Confidence 655443 5555433 3357999999877664 4889999999766654
No 290
>KOG2314|consensus
Probab=98.03 E-value=0.00027 Score=60.41 Aligned_cols=211 Identities=15% Similarity=0.202 Sum_probs=113.4
Q ss_pred eeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe--CC--c
Q psy6442 8 MLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF--GA--V 83 (231)
Q Consensus 8 ~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~--~~--~ 83 (231)
.||.+..-..++.|. |.+ |..++|||..++|.|=+--....+.. -..-..++|||+.+|...+.+.. .+ .
T Consensus 234 ~lWGG~~f~r~~RF~-Hp~-Vq~idfSP~EkYLVT~s~~p~~~~~~----d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~ 307 (698)
T KOG2314|consen 234 ALWGGESFDRIQRFY-HPG-VQFIDFSPNEKYLVTYSPEPIIVEED----DNEGQQLIIWDIATGLLKRSFPVIKSPYLK 307 (698)
T ss_pred eeecCccHHHHHhcc-CCC-ceeeecCCccceEEEecCCccccCcc----cCCCceEEEEEccccchhcceeccCCCccc
Confidence 455544444444433 543 56788898877776643211110000 01225789999999988877765 22 1
Q ss_pred ceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeecc-ceeEEEEE---------------------------------
Q psy6442 84 PNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVP-AQVHSASL--------------------------------- 129 (231)
Q Consensus 84 ~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~--------------------------------- 129 (231)
-.-..||.|+++++.-..+.|.+++.....++...... ..+...++
T Consensus 308 WP~frWS~DdKy~Arm~~~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iR 387 (698)
T KOG2314|consen 308 WPIFRWSHDDKYFARMTGNSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIR 387 (698)
T ss_pred cceEEeccCCceeEEeccceEEEEecCceeeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceee
Confidence 23567999999887655677777775543322110000 00000001
Q ss_pred ------------EecCCCCEEEE----------ecCCCeEEEEeCCCcc-eeeeccCCCCCeeEEEEcCCCCEEEEee--
Q psy6442 130 ------------LLNSERPIFVC----------GGEDLKMYKFDYSTGA-EIESFKGHFGPIHCVKFSPDGELYASGS-- 184 (231)
Q Consensus 130 ------------~~~~~~~~~~~----------g~~d~~i~~~d~~~~~-~~~~~~~h~~~V~~v~~spd~~~laS~s-- 184 (231)
.+-..|..|.. .+.-..+.++.++... ++... .-+.+|...+|-|.|..++.-+
T Consensus 388 t~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~v-elke~vi~FaWEP~gdkF~vi~g~ 466 (698)
T KOG2314|consen 388 TKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVV-ELKESVIAFAWEPHGDKFAVISGN 466 (698)
T ss_pred eccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceee-ecchheeeeeeccCCCeEEEEEcc
Confidence 00111111110 0000112222222111 01111 1345678889999998776654
Q ss_pred -CCCcEEEEeCC-CCCeeeeeeccCCcccCCCCCCccccccce
Q psy6442 185 -EDGTLRLWQTN-VGKTYGLWKCIEGGLNNSLGLDSSGHLNNV 225 (231)
Q Consensus 185 -~d~~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (231)
...++.+|.++ +.+...+.+..+...||.+.+++-|-+.=|
T Consensus 467 ~~k~tvsfY~~e~~~~~~~lVk~~dk~~~N~vfwsPkG~fvvv 509 (698)
T KOG2314|consen 467 TVKNTVSFYAVETNIKKPSLVKELDKKFANTVFWSPKGRFVVV 509 (698)
T ss_pred ccccceeEEEeecCCCchhhhhhhcccccceEEEcCCCcEEEE
Confidence 35678999988 666666777788899999999997765433
No 291
>KOG2695|consensus
Probab=98.03 E-value=3.8e-05 Score=61.90 Aligned_cols=146 Identities=12% Similarity=0.112 Sum_probs=99.5
Q ss_pred EEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEc-CCeEEEEECCCc-----ceEEeeeccceeEEEEE
Q psy6442 56 ISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH-GSCVTFLDANSL-----ELIKEHKVPAQVHSASL 129 (231)
Q Consensus 56 ~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~i~~~d~~~~-----~~~~~~~~~~~~~~~~~ 129 (231)
++.+.+-.|-+-++.++... .+.....|.++.|...+..++.++ .+.|..+|++.. .+...+-.+..+.++..
T Consensus 228 fs~G~sqqv~L~nvetg~~q-sf~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~ 306 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQQ-SFQSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQI 306 (425)
T ss_pred ecccccceeEEEEeeccccc-ccccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhh
Confidence 56677777888888776542 333456788888888888877764 678888887754 22233333333333222
Q ss_pred EecCCCCEEEEecCCCeEEEEeCCCcce---eeeccCCCCCee--EEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeee
Q psy6442 130 LLNSERPIFVCGGEDLKMYKFDYSTGAE---IESFKGHFGPIH--CVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLW 203 (231)
Q Consensus 130 ~~~~~~~~~~~g~~d~~i~~~d~~~~~~---~~~~~~h~~~V~--~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~ 203 (231)
. ..+++.+.+.+-+++|.+||++-.+. +.+++||...-. -+-..|....++++++|--.|||.+..|....+.
T Consensus 307 L-q~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~ti 384 (425)
T KOG2695|consen 307 L-QFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTI 384 (425)
T ss_pred h-ccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeecc
Confidence 1 23566677778899999999986655 889999954322 2334455668888999999999999999766554
No 292
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.00 E-value=0.0044 Score=48.94 Aligned_cols=119 Identities=19% Similarity=0.245 Sum_probs=71.7
Q ss_pred CEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEc--CCeEEEEECCCcce-E---Eee-ecccee-EEEEEEecCC
Q psy6442 63 TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH--GSCVTFLDANSLEL-I---KEH-KVPAQV-HSASLLLNSE 134 (231)
Q Consensus 63 ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~i~~~d~~~~~~-~---~~~-~~~~~~-~~~~~~~~~~ 134 (231)
.|..++.. ++.......-..++.++++|+++.+++.. .+.|..++...... + +.+ ..+... ..-.+..+.+
T Consensus 116 ~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~ 194 (246)
T PF08450_consen 116 SVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSD 194 (246)
T ss_dssp EEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTT
T ss_pred ceEEECCC-CeEEEEecCcccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCC
Confidence 34445554 33333333345689999999999888754 46777777643221 1 111 222111 1222334788
Q ss_pred CCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEc-CCCC-EEEEe
Q psy6442 135 RPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFS-PDGE-LYASG 183 (231)
Q Consensus 135 ~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~s-pd~~-~laS~ 183 (231)
+.+.++....+.|.+++.. |+.+..+.--...+++++|. |+.. +++|.
T Consensus 195 G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 195 GNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFGGPDGKTLYVTT 244 (246)
T ss_dssp S-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEESTTSSEEEEEE
T ss_pred CCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEECCCCCEEEEEe
Confidence 8888887788999999986 88777765445589999994 5644 55544
No 293
>KOG2695|consensus
Probab=98.00 E-value=5.4e-05 Score=61.06 Aligned_cols=111 Identities=10% Similarity=0.133 Sum_probs=81.0
Q ss_pred CCEEEEEeCCCCEEEEeCCCC-----CceEEEEeCCcceeEEEcc-CCCEEEEE-cCCeEEEEECCCcce---EEeeecc
Q psy6442 52 NTRLISCAEDKTVRLWDVSAS-----AEVQKLEFGAVPNSLEISR-DGTTITVT-HGSCVTFLDANSLEL---IKEHKVP 121 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~-----~~~~~~~~~~~~~~v~~~~-~~~~~~~~-~~~~i~~~d~~~~~~---~~~~~~~ 121 (231)
+..+.-|...|.|...|++.+ .+...+.++..++++..-. +++.+.++ .+++|.+||.+..++ +..+..+
T Consensus 264 ~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGH 343 (425)
T KOG2695|consen 264 DNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGH 343 (425)
T ss_pred CCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecc
Confidence 455777788899999999864 4566677888899988776 66666665 478999999887666 5555443
Q ss_pred ceeEE-EEEEecCCCCEEEEecCCCeEEEEeCCCcceeeecc
Q psy6442 122 AQVHS-ASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFK 162 (231)
Q Consensus 122 ~~~~~-~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~ 162 (231)
..... .-+..++....++++++|...++|.+..+.++.+++
T Consensus 344 vN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tip 385 (425)
T KOG2695|consen 344 VNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIP 385 (425)
T ss_pred cccccccccccccccceEEEccCeeEEEEEecccCceeeccC
Confidence 21111 112336677778889999999999999998887765
No 294
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=97.96 E-value=0.0018 Score=55.42 Aligned_cols=169 Identities=15% Similarity=0.128 Sum_probs=104.4
Q ss_pred CCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCC--CCEEEEeCCCCCceEEEEeCCcceeEEEccC
Q psy6442 15 GDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAED--KTVRLWDVSASAEVQKLEFGAVPNSLEISRD 92 (231)
Q Consensus 15 g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D--~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 92 (231)
|.....+..-...+..-.|+|+++.++.. +-... ..+.++|+..++....+.+...-..-+|+||
T Consensus 182 g~~~~~l~~~~~~~~~p~ws~~~~~~~y~-------------~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspD 248 (425)
T COG0823 182 GYNQQKLTDSGSLILTPAWSPDGKKLAYV-------------SFELGGCPRIYYLDLNTGKRPVILNFNGNNGAPAFSPD 248 (425)
T ss_pred CcceeEecccCcceeccccCcCCCceEEE-------------EEecCCCceEEEEeccCCccceeeccCCccCCccCCCC
Confidence 66666666555667777788887665432 22222 3588899998887777776666666789999
Q ss_pred CCEEEEEc--CC--eEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCC-C--eEEEEeCCCcceeeeccCCC
Q psy6442 93 GTTITVTH--GS--CVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGED-L--KMYKFDYSTGAEIESFKGHF 165 (231)
Q Consensus 93 ~~~~~~~~--~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d-~--~i~~~d~~~~~~~~~~~~h~ 165 (231)
|+.++.+. ++ .|.++|+......+......... .-.++|+|+.++..+.. + .|++.+.+.+.. ..+.-..
T Consensus 249 G~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~--~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~ 325 (425)
T COG0823 249 GSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINT--SPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSG 325 (425)
T ss_pred CCEEEEEECCCCCccEEEEcCCCCcceecccCCcccc--CccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeeccC
Confidence 99877643 23 56778887766443222222111 23448899988776543 3 477777765543 2222122
Q ss_pred CCeeEEEEcCCCCEEEEeeCC-Cc--EEEEeCCCCCe
Q psy6442 166 GPIHCVKFSPDGELYASGSED-GT--LRLWQTNVGKT 199 (231)
Q Consensus 166 ~~V~~v~~spd~~~laS~s~d-~~--v~iwd~~~~~~ 199 (231)
..-..-.+||||.+++..+.. |. |-+.+..++..
T Consensus 326 ~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~ 362 (425)
T COG0823 326 GGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGK 362 (425)
T ss_pred CCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCc
Confidence 222256799999998888753 33 66666666654
No 295
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=97.91 E-value=0.008 Score=48.97 Aligned_cols=149 Identities=12% Similarity=0.184 Sum_probs=92.2
Q ss_pred CCEEEEEeCC-CCEEEEeCCCCCceEEE----EeCCcceeEEEccCCCEEEEEc--CCeEEEEECCCc----ceEEeee-
Q psy6442 52 NTRLISCAED-KTVRLWDVSASAEVQKL----EFGAVPNSLEISRDGTTITVTH--GSCVTFLDANSL----ELIKEHK- 119 (231)
Q Consensus 52 ~~~l~s~s~D-~ti~iwd~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~--~~~i~~~d~~~~----~~~~~~~- 119 (231)
+++|+++.-. ..|.+|++.+++..... +-+.-+..+.|+|+++..++-. +++|.+|..... +.++.+.
T Consensus 156 ~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~t 235 (346)
T COG2706 156 GRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDT 235 (346)
T ss_pred CCEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeecc
Confidence 3345544321 34888999877654332 2345789999999999887653 578888776542 2233221
Q ss_pred ----ccceeEEEEEEecCCCCEEEEecCCC-eEEEEeC--CCcce--eeeccCCCCCeeEEEEcCCCCEEEEee-CCCcE
Q psy6442 120 ----VPAQVHSASLLLNSERPIFVCGGEDL-KMYKFDY--STGAE--IESFKGHFGPIHCVKFSPDGELYASGS-EDGTL 189 (231)
Q Consensus 120 ----~~~~~~~~~~~~~~~~~~~~~g~~d~-~i~~~d~--~~~~~--~~~~~~h~~~V~~v~~spd~~~laS~s-~d~~v 189 (231)
.........+..++++++|....... .|.+|.+ .++.+ +....-+....+...|+|.+++|+.+. ++.+|
T Consensus 236 lP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i 315 (346)
T COG2706 236 LPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNI 315 (346)
T ss_pred CccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcE
Confidence 12334455666799999988765432 4666654 33432 222233444578899999999887776 45668
Q ss_pred EEEeC--CCCCee
Q psy6442 190 RLWQT--NVGKTY 200 (231)
Q Consensus 190 ~iwd~--~~~~~~ 200 (231)
.+|.. .+|+.-
T Consensus 316 ~vf~~d~~TG~L~ 328 (346)
T COG2706 316 TVFERDKETGRLT 328 (346)
T ss_pred EEEEEcCCCceEE
Confidence 99965 455543
No 296
>KOG2314|consensus
Probab=97.90 E-value=0.0011 Score=56.85 Aligned_cols=118 Identities=14% Similarity=0.229 Sum_probs=70.6
Q ss_pred EEEeCCcceeEEEccCCCEEEEEcC----CeEEEEECCC-cceEEeeeccceeEEEEEEecCCCCEEEEe---cCCCeEE
Q psy6442 77 KLEFGAVPNSLEISRDGTTITVTHG----SCVTFLDANS-LELIKEHKVPAQVHSASLLLNSERPIFVCG---GEDLKMY 148 (231)
Q Consensus 77 ~~~~~~~~~~v~~~~~~~~~~~~~~----~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~d~~i~ 148 (231)
.+++...+...+|.|.|..+++..+ .++.+|-... .........-.+..+..+.++|.|++++.+ +..+.+.
T Consensus 441 ~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~ 520 (698)
T KOG2314|consen 441 VVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDKKFANTVFWSPKGRFVVVAALVSRRGDLE 520 (698)
T ss_pred eeecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcccccceEEEcCCCcEEEEEEecccccceE
Confidence 3344566778889999987665332 4666776542 111111111112333445568999987765 4567888
Q ss_pred EEeCCCcceeee-ccCCCCCeeEEEEcCCCCEEEEeeC------CCcEEEEeCC
Q psy6442 149 KFDYSTGAEIES-FKGHFGPIHCVKFSPDGELYASGSE------DGTLRLWQTN 195 (231)
Q Consensus 149 ~~d~~~~~~~~~-~~~h~~~V~~v~~spd~~~laS~s~------d~~v~iwd~~ 195 (231)
.+|+.......+ ...|. .-+.+.|.|.|+++++++. |.--+||+++
T Consensus 521 F~D~~~a~~k~~~~~eh~-~at~veWDPtGRYvvT~ss~wrhk~d~GYri~tfq 573 (698)
T KOG2314|consen 521 FYDTDYADLKDTASPEHF-AATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQ 573 (698)
T ss_pred EEecchhhhhhccCcccc-ccccceECCCCCEEEEeeehhhhccccceEEEEee
Confidence 898864222111 11243 3467899999999999874 5556777764
No 297
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.89 E-value=4.7e-05 Score=40.42 Aligned_cols=39 Identities=38% Similarity=0.726 Sum_probs=33.5
Q ss_pred CCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEe
Q psy6442 15 GDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWD 68 (231)
Q Consensus 15 g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd 68 (231)
++.+..+..|...|.++.|++.+ ..+++++.|+.+++|+
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~---------------~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDG---------------KYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCC---------------CEEEEecCCCeEEEcC
Confidence 56778899999999999999863 4588999999999996
No 298
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=97.88 E-value=0.0035 Score=52.98 Aligned_cols=125 Identities=11% Similarity=0.078 Sum_probs=85.9
Q ss_pred CCEEEEEeCCC-CEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcC-CeEEEEECCCcceEEeeeccceeEEEEE
Q psy6442 52 NTRLISCAEDK-TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHG-SCVTFLDANSLELIKEHKVPAQVHSASL 129 (231)
Q Consensus 52 ~~~l~s~s~D~-ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 129 (231)
+..++.+-.|| .+-|+|...++..+...--..+..+..+++|+.++++.+ ..+.++|+.+......-+... .....+
T Consensus 371 ~e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~-~lItdf 449 (668)
T COG4946 371 PEGDVIGTNDGDKLGIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEY-GLITDF 449 (668)
T ss_pred CcceEEeccCCceEEEEecCCceEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEeccccc-ceeEEE
Confidence 44678888888 899999998876555444567899999999998888766 477788888766543322222 122345
Q ss_pred EecCCCCEEEEecCC----CeEEEEeCCCcceeee--ccCCCCCeeEEEEcCCCCEE
Q psy6442 130 LLNSERPIFVCGGED----LKMYKFDYSTGAEIES--FKGHFGPIHCVKFSPDGELY 180 (231)
Q Consensus 130 ~~~~~~~~~~~g~~d----~~i~~~d~~~~~~~~~--~~~h~~~V~~v~~spd~~~l 180 (231)
.++|+++.+|.+=.+ ..|+++|+..++.... -.+|. .+=+|.||+++|
T Consensus 450 ~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~D---fsPaFD~d~ryL 503 (668)
T COG4946 450 DWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYD---FSPAFDPDGRYL 503 (668)
T ss_pred EEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccc---cCcccCCCCcEE
Confidence 568999998876544 5799999987765432 22332 334788899854
No 299
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.87 E-value=0.0043 Score=52.75 Aligned_cols=195 Identities=16% Similarity=0.149 Sum_probs=121.3
Q ss_pred CCCceeeeccCCCeEeeeeccccc--EE-EEEECCCCceeEeccc--------------------------cccc--c-C
Q psy6442 4 DGKPMLRQGDTGDWIGTFEGHKGC--VW-GVDINKDASKAASGAA--------------------------DFQA--K-N 51 (231)
Q Consensus 4 d~~~~~~~~~~g~~i~~l~gH~~~--V~-~~~~~~~~~~~~s~~~--------------------------d~~~--~-~ 51 (231)
++++.+||..+|.++.++.+-..+ .| -+.|+.+.++.+--.. +|.+ . +
T Consensus 107 ~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~sl~i~e~t~n~~~~p~~~lr~~gi~dFsisP~~n 186 (561)
T COG5354 107 KNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVGSSLYIHEITDNIEEHPFKNLRPVGILDFSISPEGN 186 (561)
T ss_pred cCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhccCeEEEEecCCccccCchhhccccceeeEEecCCCC
Confidence 457999999999999999987777 66 5677776665542211 0111 1 2
Q ss_pred CCEEEE-----EeCCCCEEEEeCCCCCceEEEEe-CCcceeEEEccCCCEEEEE---c---------CCeEEEEECCCcc
Q psy6442 52 NTRLIS-----CAEDKTVRLWDVSASAEVQKLEF-GAVPNSLEISRDGTTITVT---H---------GSCVTFLDANSLE 113 (231)
Q Consensus 52 ~~~l~s-----~s~D~ti~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~---~---------~~~i~~~d~~~~~ 113 (231)
...|+. .+.+.+++||.+..++.+.+..+ ...-..+.|.+.+..+++. + .+.+.++++....
T Consensus 187 ~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~ 266 (561)
T COG5354 187 HDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERS 266 (561)
T ss_pred CceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccc
Confidence 233332 35677888888887766655443 3344567788888876542 1 1345556654332
Q ss_pred eEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeC---CCcEE
Q psy6442 114 LIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSE---DGTLR 190 (231)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~---d~~v~ 190 (231)
..-......+++..+|.+..++--+++|-.+..+-.+|++.. ....+ -..+=+.+.|||.+++++.++- .|.|-
T Consensus 267 i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~--Pe~~rNT~~fsp~~r~il~agF~nl~gni~ 343 (561)
T COG5354 267 IPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYF--PEQKRNTIFFSPHERYILFAGFDNLQGNIE 343 (561)
T ss_pred cceeccccccceeeeecccCCceeEEecccccceeecccccc-eEEec--CCcccccccccCcccEEEEecCCccccceE
Confidence 222223345677777744444434456667788889998765 33333 2334566789999999888774 56799
Q ss_pred EEeCCCCCeee
Q psy6442 191 LWQTNVGKTYG 201 (231)
Q Consensus 191 iwd~~~~~~~~ 201 (231)
|||........
T Consensus 344 i~~~~~rf~~~ 354 (561)
T COG5354 344 IFDPAGRFKVA 354 (561)
T ss_pred EeccCCceEEE
Confidence 99987665543
No 300
>KOG2315|consensus
Probab=97.77 E-value=0.005 Score=52.81 Aligned_cols=197 Identities=15% Similarity=0.173 Sum_probs=112.5
Q ss_pred CCceeeeccCCCeEeeeecccccEEEEEECCCCc--eeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe--
Q psy6442 5 GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDAS--KAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF-- 80 (231)
Q Consensus 5 ~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~--~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~-- 80 (231)
+.|.+++...-+-+.. +-|...|..+.++|.+. .++. + ..-+.|.=..||||..........+..
T Consensus 146 nev~f~~~~~f~~~~~-kl~~~~i~~f~lSpgp~~~~vAv----y------vPe~kGaPa~vri~~~~~~~~~~~~a~ks 214 (566)
T KOG2315|consen 146 NEVQFYDLGSFKTIQH-KLSVSGITMLSLSPGPEPPFVAV----Y------VPEKKGAPASVRIYKYPEEGQHQPVANKS 214 (566)
T ss_pred ceEEEEecCCccceee-eeeccceeeEEecCCCCCceEEE----E------ccCCCCCCcEEEEeccccccccchhhhcc
Confidence 4566676654333222 34567777888887632 1111 0 011334556799998763322211111
Q ss_pred --CCcceeEEEccCCCEEEE--E-----------cCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEE--EEecC
Q psy6442 81 --GAVPNSLEISRDGTTITV--T-----------HGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIF--VCGGE 143 (231)
Q Consensus 81 --~~~~~~v~~~~~~~~~~~--~-----------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~ 143 (231)
...--.+.|.+-+.-+++ + ....++++++....+.-...-..+++...| ++.++.+ +.|-.
T Consensus 215 FFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W--~~s~~EF~VvyGfM 292 (566)
T KOG2315|consen 215 FFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTW--SPSGREFAVVYGFM 292 (566)
T ss_pred ccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCCCCceEEEE--CCCCCEEEEEEecc
Confidence 112234456665553322 1 113567777663333333333457887777 5665543 34445
Q ss_pred CCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeC---CCcEEEEeCCCCCeeeeeeccCCcccCCCCCCccc
Q psy6442 144 DLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSE---DGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSG 220 (231)
Q Consensus 144 d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~---d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (231)
-.++-+||++ +..+..+ -.++-+++-|+|.|++++-|+- -|.+-|||+.+.|.+...++ ..+....|.+||
T Consensus 293 PAkvtifnlr-~~~v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a---~~tt~~eW~PdG 366 (566)
T KOG2315|consen 293 PAKVTIFNLR-GKPVFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKA---ANTTVFEWSPDG 366 (566)
T ss_pred cceEEEEcCC-CCEeEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhcccccc---CCceEEEEcCCC
Confidence 5678889874 4555555 3467788999999999988874 57899999999887755553 333444555555
No 301
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.70 E-value=0.0082 Score=53.12 Aligned_cols=135 Identities=17% Similarity=0.178 Sum_probs=87.8
Q ss_pred CCCEEEEEeCCCCEEEEeCCC-----CCceEEEEeCCcceeEEEccCCCEEEEEc--CCeEEEEECCCcce---------
Q psy6442 51 NNTRLISCAEDKTVRLWDVSA-----SAEVQKLEFGAVPNSLEISRDGTTITVTH--GSCVTFLDANSLEL--------- 114 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iwd~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~i~~~d~~~~~~--------- 114 (231)
+++.... .+++|.+.|.++ .+.+..+..+..+-.+.++||++.++++. +..+.++|....+.
T Consensus 287 dGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~ 364 (635)
T PRK02888 287 AGKFKTI--GGSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPR 364 (635)
T ss_pred CCCEEEE--CCCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCcc
Confidence 4444443 367899999988 46677788889999999999999998875 47899999876542
Q ss_pred ---EEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCC----------cceeeeccCCCCCee-----EEEEcCC
Q psy6442 115 ---IKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYST----------GAEIESFKGHFGPIH-----CVKFSPD 176 (231)
Q Consensus 115 ---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~----------~~~~~~~~~h~~~V~-----~v~~spd 176 (231)
..+....... +-..+++++....+---|..|-.|++.. ...+..+.-|..+-+ .=.-.||
T Consensus 365 ~~vvaevevGlGP--LHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~~g~t~~~d 442 (635)
T PRK02888 365 DAVVAEPELGLGP--LHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHASMGETKEAD 442 (635)
T ss_pred ceEEEeeccCCCc--ceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCccceeeecCCCcCCCC
Confidence 2223222211 1122377777666767788899999865 233444444443332 2224678
Q ss_pred CCEEEEee---CCCcE
Q psy6442 177 GELYASGS---EDGTL 189 (231)
Q Consensus 177 ~~~laS~s---~d~~v 189 (231)
|++|++.. .|+.+
T Consensus 443 gk~l~~~nk~skdrfl 458 (635)
T PRK02888 443 GKWLVSLNKFSKDRFL 458 (635)
T ss_pred CCEEEEcccccccccc
Confidence 88887764 45444
No 302
>KOG0309|consensus
Probab=97.69 E-value=9e-05 Score=65.28 Aligned_cols=62 Identities=23% Similarity=0.467 Sum_probs=48.7
Q ss_pred EEEecCCCeEEEEeCCCc-ceeeeccCCCCCeeEEEEcCC-CCEEEEeeCCCcEEEEeCCCCCe
Q psy6442 138 FVCGGEDLKMYKFDYSTG-AEIESFKGHFGPIHCVKFSPD-GELYASGSEDGTLRLWQTNVGKT 199 (231)
Q Consensus 138 ~~~g~~d~~i~~~d~~~~-~~~~~~~~h~~~V~~v~~spd-~~~laS~s~d~~v~iwd~~~~~~ 199 (231)
+.+.+....|++||.+.+ ..+..+++|...|++++|..- ...+.+++.|++|+.||.....+
T Consensus 173 vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~ 236 (1081)
T KOG0309|consen 173 VLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTT 236 (1081)
T ss_pred hhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccccc
Confidence 334455566889999765 567889999999999999875 35788999999999999865443
No 303
>KOG0309|consensus
Probab=97.67 E-value=7.4e-05 Score=65.78 Aligned_cols=148 Identities=17% Similarity=0.196 Sum_probs=85.1
Q ss_pred CCCceeeeccCC-CeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCce--EEEEe
Q psy6442 4 DGKPMLRQGDTG-DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEV--QKLEF 80 (231)
Q Consensus 4 d~~~~~~~~~~g-~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~--~~~~~ 80 (231)
...+++|+..-| ..++++++|...|..++|+.- -...+.+++.|++|++||....... +++.-
T Consensus 179 g~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~--------------~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt 244 (1081)
T KOG0309|consen 179 GNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRF--------------KYSEIMSSSNDGTVKFWDYSKSTTESKRTVTT 244 (1081)
T ss_pred CCceEEEeccCCCcceEEecccceeeehHHHhhh--------------hhhhhcccCCCCceeeecccccccccceeccc
Confidence 356889998655 578999999999999988753 1345889999999999998654321 11111
Q ss_pred CCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCC-cceee
Q psy6442 81 GAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYST-GAEIE 159 (231)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~-~~~~~ 159 (231)
..++..-.+.|=+.-. ++.+.-.+..+..-.-+..-..|+..+ .+.++
T Consensus 245 ~~piw~~r~~Pfg~g~-------------------------------~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh 293 (1081)
T KOG0309|consen 245 NFPIWRGRYLPFGEGY-------------------------------CIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVH 293 (1081)
T ss_pred cCcceeccccccCcee-------------------------------EeccccCCeeeeeccccchhhhhccccCCccee
Confidence 1122111122211100 000000000000000011112344333 35789
Q ss_pred eccCCCCCeeEEEEcCCC----------CEEEEeeCCCcEEEEeCCC
Q psy6442 160 SFKGHFGPIHCVKFSPDG----------ELYASGSEDGTLRLWQTNV 196 (231)
Q Consensus 160 ~~~~h~~~V~~v~~spd~----------~~laS~s~d~~v~iwd~~~ 196 (231)
+|.||...|...-|-..+ -.|++=|.|.++|+|-+.+
T Consensus 294 ~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~ 340 (1081)
T KOG0309|consen 294 TFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDS 340 (1081)
T ss_pred eecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeeccH
Confidence 999999988765554421 2799999999999999753
No 304
>KOG1354|consensus
Probab=97.67 E-value=0.0043 Score=50.41 Aligned_cols=133 Identities=17% Similarity=0.214 Sum_probs=88.9
Q ss_pred cccccEEEEEECCCCceeEeccc------------------c-----------------ccccCCCEEEEEeCCCCEEEE
Q psy6442 23 GHKGCVWGVDINKDASKAASGAA------------------D-----------------FQAKNNTRLISCAEDKTVRLW 67 (231)
Q Consensus 23 gH~~~V~~~~~~~~~~~~~s~~~------------------d-----------------~~~~~~~~l~s~s~D~ti~iw 67 (231)
.|+=-|.++.++.|...++++.. | |.+.....++-.|.-|+||+-
T Consensus 162 aHtyhiNSIS~NsD~Et~lSADdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLc 241 (433)
T KOG1354|consen 162 AHTYHINSISVNSDKETFLSADDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLC 241 (433)
T ss_pred cceeEeeeeeecCccceEeeccceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEe
Confidence 67777899999999988888743 0 122244566767778999999
Q ss_pred eCCCCCce----EEEE-------------eCCcceeEEEccCCCEEEEEcCCeEEEEECC-CcceEEeeeccc-------
Q psy6442 68 DVSASAEV----QKLE-------------FGAVPNSLEISRDGTTITVTHGSCVTFLDAN-SLELIKEHKVPA------- 122 (231)
Q Consensus 68 d~~~~~~~----~~~~-------------~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~~~~~~~------- 122 (231)
|++..... ..++ .-..+.++.|+++|++++....-++.+||.. ..+++.++..+.
T Consensus 242 DmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDyltvk~wD~nme~~pv~t~~vh~~lr~kLc 321 (433)
T KOG1354|consen 242 DMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDYLTVKLWDLNMEAKPVETYPVHEYLRSKLC 321 (433)
T ss_pred echhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEeccceeEEEeccccCCcceEEeehHhHHHHHH
Confidence 99843211 0011 1145678899999999988888899999984 344444433210
Q ss_pred -------eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc
Q psy6442 123 -------QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG 155 (231)
Q Consensus 123 -------~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~ 155 (231)
-.....+.++++...+.+|+.....++++...|
T Consensus 322 ~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~g 361 (433)
T KOG1354|consen 322 SLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARG 361 (433)
T ss_pred HHhhccchhheeEEEEcCCcceEecccccceEEEecCCCC
Confidence 001122334778888999999999999986554
No 305
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=97.66 E-value=0.015 Score=54.66 Aligned_cols=132 Identities=16% Similarity=0.192 Sum_probs=82.6
Q ss_pred cceeEEEccCCCEEEEEc-----C--CeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecC---CCeEEEEeC
Q psy6442 83 VPNSLEISRDGTTITVTH-----G--SCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGE---DLKMYKFDY 152 (231)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~-----~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---d~~i~~~d~ 152 (231)
.-..++|..||.+++++. + ..+++|+.. +......+ +.....-.+.+.|.|.++|+... ...|..|+
T Consensus 211 ~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE-~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE- 287 (928)
T PF04762_consen 211 GRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSE-PVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE- 287 (928)
T ss_pred CceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccc-cCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-
Confidence 446788999999988752 2 467888865 22222222 22222223455889988887643 34565664
Q ss_pred CCcceeeecc----CCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCee--eeeeccCCcccCCCCCCc
Q psy6442 153 STGAEIESFK----GHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTY--GLWKCIEGGLNNSLGLDS 218 (231)
Q Consensus 153 ~~~~~~~~~~----~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~ 218 (231)
+.|.....|. .....|..++|++|+..||.--.|. |.||...+-.=| +.+......-...+.|++
T Consensus 288 rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdp 358 (928)
T PF04762_consen 288 RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDP 358 (928)
T ss_pred cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECC
Confidence 4554444332 3456799999999999999988666 999998776532 445543333334456665
No 306
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=97.64 E-value=0.0069 Score=51.41 Aligned_cols=147 Identities=12% Similarity=0.060 Sum_probs=84.4
Q ss_pred CCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccceeEE----
Q psy6442 51 NNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHS---- 126 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~---- 126 (231)
.+..++.++.++.+.-+|..+++.+-.......+.+--.-.++..++...++.+.-+|..+++.+..+....+...
T Consensus 119 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~ 198 (394)
T PRK11138 119 AGGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVVSDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGE 198 (394)
T ss_pred ECCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEEECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCC
Confidence 3566777888999999999999887766554432221111234444444567888899988888776654321100
Q ss_pred EEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCC-------CeeEEEEcC--CCCEEEEeeCCCcEEEEeCCCC
Q psy6442 127 ASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFG-------PIHCVKFSP--DGELYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 127 ~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~-------~V~~v~~sp--d~~~laS~s~d~~v~iwd~~~~ 197 (231)
...... +..++.+..++.+..+|..+|+.+...+-... ....+.-+| .+..+..++.++.+...|..+|
T Consensus 199 ~sP~v~--~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG 276 (394)
T PRK11138 199 SAPATA--FGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSG 276 (394)
T ss_pred CCCEEE--CCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCC
Confidence 000001 12355667788888888888876544321000 011111233 2344555666777888888777
Q ss_pred Ce
Q psy6442 198 KT 199 (231)
Q Consensus 198 ~~ 199 (231)
+.
T Consensus 277 ~~ 278 (394)
T PRK11138 277 QI 278 (394)
T ss_pred CE
Confidence 64
No 307
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=97.63 E-value=0.016 Score=50.17 Aligned_cols=77 Identities=13% Similarity=0.144 Sum_probs=57.1
Q ss_pred EEEEeCCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCC
Q psy6442 76 QKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYST 154 (231)
Q Consensus 76 ~~~~~~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~ 154 (231)
..+.++..+.+++++|+...++.+ .|+.+.+||....... ..+.+.... .+.++|++.+++.|+..|.+.+||+..
T Consensus 254 tsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~-~~ka~~~P~--~iaWHp~gai~~V~s~qGelQ~FD~AL 330 (545)
T PF11768_consen 254 TSIPLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTL-LAKAEFIPT--LIAWHPDGAIFVVGSEQGELQCFDMAL 330 (545)
T ss_pred EEEecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeee-eeeecccce--EEEEcCCCcEEEEEcCCceEEEEEeec
Confidence 445677899999999999877665 5899999998655322 223333233 344599999999999999999999865
Q ss_pred c
Q psy6442 155 G 155 (231)
Q Consensus 155 ~ 155 (231)
+
T Consensus 331 s 331 (545)
T PF11768_consen 331 S 331 (545)
T ss_pred C
Confidence 4
No 308
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=97.59 E-value=0.032 Score=47.35 Aligned_cols=146 Identities=11% Similarity=0.101 Sum_probs=87.1
Q ss_pred CEEEEEeCCCCEEEEeCCCCCceEEEEeCCcc--------eeEEEcc---CCCEEEEEcCCeEEEEECCCcceEEeeecc
Q psy6442 53 TRLISCAEDKTVRLWDVSASAEVQKLEFGAVP--------NSLEISR---DGTTITVTHGSCVTFLDANSLELIKEHKVP 121 (231)
Q Consensus 53 ~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~--------~~v~~~~---~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 121 (231)
..++.++.++.+...|..+++.+......... ..+..+| ++..++.+.++.+.-+|..+.+.+......
T Consensus 206 ~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~ 285 (394)
T PRK11138 206 GGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYG 285 (394)
T ss_pred CEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCC
Confidence 45666778899988998888766544321110 0011111 333334456778888888887766554332
Q ss_pred ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCC-CeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCee
Q psy6442 122 AQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFG-PIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~-~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~ 200 (231)
... . .. ..+..+..++.++.++.+|..+++.+.....-.. ...+..+ .+.+|..++.||.|.+.|..+|+..
T Consensus 286 ~~~-~--~~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~ 358 (394)
T PRK11138 286 SVN-D--FA--VDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINREDGRFV 358 (394)
T ss_pred Ccc-C--cE--EECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEECCCCCEE
Confidence 111 0 11 1233466677899999999999887654321111 1111112 2456777899999999999999876
Q ss_pred eeeec
Q psy6442 201 GLWKC 205 (231)
Q Consensus 201 ~~~~~ 205 (231)
...+.
T Consensus 359 ~~~~~ 363 (394)
T PRK11138 359 AQQKV 363 (394)
T ss_pred EEEEc
Confidence 65543
No 309
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.48 E-value=0.038 Score=45.45 Aligned_cols=191 Identities=17% Similarity=0.228 Sum_probs=117.4
Q ss_pred CCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCC-
Q psy6442 4 DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGA- 82 (231)
Q Consensus 4 d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~- 82 (231)
.+++++.|+++++++..... +..-.+..+|+++.+..+..-+.- +.=|-...-|.+||..+-.....+.++.
T Consensus 16 ~~rv~viD~d~~k~lGmi~~--g~~~~~~~spdgk~~y~a~T~~sR-----~~rG~RtDvv~~~D~~TL~~~~EI~iP~k 88 (342)
T PF06433_consen 16 TSRVYVIDADSGKLLGMIDT--GFLGNVALSPDGKTIYVAETFYSR-----GTRGERTDVVEIWDTQTLSPTGEIEIPPK 88 (342)
T ss_dssp SEEEEEEETTTTEEEEEEEE--ESSEEEEE-TTSSEEEEEEEEEEE-----TTEEEEEEEEEEEETTTTEEEEEEEETTS
T ss_pred cceEEEEECCCCcEEEEeec--ccCCceeECCCCCEEEEEEEEEec-----cccccceeEEEEEecCcCcccceEecCCc
Confidence 46899999999999888763 233345678998877665432221 1111123357899999988887777653
Q ss_pred -------cceeEEEccCCCEEEEEc---CCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeC
Q psy6442 83 -------VPNSLEISRDGTTITVTH---GSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDY 152 (231)
Q Consensus 83 -------~~~~v~~~~~~~~~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~ 152 (231)
.....+++.|++.+++.+ ...+.+.|+...+.+.++..|.-...+ +.+. +-+.+-+.||.+....+
T Consensus 89 ~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PGC~~iy---P~~~-~~F~~lC~DGsl~~v~L 164 (342)
T PF06433_consen 89 PRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPGCWLIY---PSGN-RGFSMLCGDGSLLTVTL 164 (342)
T ss_dssp -B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTSEEEEE---EEET-TEEEEEETTSCEEEEEE
T ss_pred chheecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCCEEEEE---ecCC-CceEEEecCCceEEEEE
Confidence 234668899999888743 468999999999999888877533221 2222 33566677888877776
Q ss_pred C-Ccceee----eccCCCCCee-EEEEcCCCCEEEEeeCCCcEEEEeCCCCCe--eeeeec
Q psy6442 153 S-TGAEIE----SFKGHFGPIH-CVKFSPDGELYASGSEDGTLRLWQTNVGKT--YGLWKC 205 (231)
Q Consensus 153 ~-~~~~~~----~~~~h~~~V~-~v~~spd~~~laS~s~d~~v~iwd~~~~~~--~~~~~~ 205 (231)
. .|+... .|..-..++. .-+++..+..+.=-+.+|.|+--|+...+. ...|+.
T Consensus 165 d~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~ 225 (342)
T PF06433_consen 165 DADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSL 225 (342)
T ss_dssp TSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEES
T ss_pred CCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccc
Confidence 5 444332 1222223332 334555555555578888888888766553 234553
No 310
>KOG4714|consensus
Probab=97.41 E-value=0.00088 Score=52.32 Aligned_cols=57 Identities=26% Similarity=0.485 Sum_probs=48.5
Q ss_pred CCcCCCceeeeccCCCe-EeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCC
Q psy6442 1 MCVDGKPMLRQGDTGDW-IGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSA 71 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~-i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~ 71 (231)
|+.||-+.||+...... ...|+.|+.++|.+.|+|. ++..|.+|+.||.+--||..+
T Consensus 198 gt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk--------------~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 198 GTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPK--------------NPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred ecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCC--------------CchheeEecCCCcEEEEcCCC
Confidence 46899999999877754 4557899999999999985 466799999999999999865
No 311
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.40 E-value=0.036 Score=47.41 Aligned_cols=39 Identities=23% Similarity=0.391 Sum_probs=31.7
Q ss_pred CCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeee
Q psy6442 165 FGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLW 203 (231)
Q Consensus 165 ~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~ 203 (231)
.+++..+++||+++++|--..+|.+.|....-.+.+...
T Consensus 216 ~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~ 254 (410)
T PF04841_consen 216 DGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEF 254 (410)
T ss_pred CCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEe
Confidence 368999999999999999999999998887555544333
No 312
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=97.40 E-value=0.017 Score=54.22 Aligned_cols=160 Identities=17% Similarity=0.159 Sum_probs=95.4
Q ss_pred CCCEEEEEeCCCCEEEE----eCCCCCceEEEEeCCcceeEEEccCCCEEEE-EcCCeEEEEECCCcceEEeeeccceeE
Q psy6442 51 NNTRLISCAEDKTVRLW----DVSASAEVQKLEFGAVPNSLEISRDGTTITV-THGSCVTFLDANSLELIKEHKVPAQVH 125 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iw----d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~ 125 (231)
+...++.+..+|.|.+. +.........-..+..+.+++|+||+..+++ +..+.+.++. ++..++.+......
T Consensus 86 d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt-~~fd~i~E~~l~~~-- 162 (928)
T PF04762_consen 86 DSESLCIALASGDIILVREDPDPDEDEIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMT-RDFDPISEVPLDSD-- 162 (928)
T ss_pred CCCcEEEEECCceEEEEEccCCCCCceeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEe-ccceEEEEeecCcc--
Confidence 45567777888999988 5555444333345778999999999998765 4556777764 44455544332211
Q ss_pred EEEEEecCCCCEEEEecCCCeEEEEeCCCcce--------------eeeccCCCCCeeEEEEcCCCCEEEEeeC---C--
Q psy6442 126 SASLLLNSERPIFVCGGEDLKMYKFDYSTGAE--------------IESFKGHFGPIHCVKFSPDGELYASGSE---D-- 186 (231)
Q Consensus 126 ~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~--------------~~~~~~h~~~V~~v~~spd~~~laS~s~---d-- 186 (231)
.......++.|+..+=--|.-+.++. ...+. +...-..++|-.||.++|..+. .
T Consensus 163 ------~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~~~~~~ 235 (928)
T PF04762_consen 163 ------DFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSVEPETGS 235 (928)
T ss_pred ------ccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEEEEEEcCCCc
Confidence 01111233333332211122111111 11122 3344567999999999988874 2
Q ss_pred -CcEEEEeCCCCCeeeeeeccCCcccCCCCCCccccc
Q psy6442 187 -GTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGHL 222 (231)
Q Consensus 187 -~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (231)
+.+|||+-+ |+.... .+-.+++...++|-++|.+
T Consensus 236 ~R~iRVy~Re-G~L~st-SE~v~gLe~~l~WrPsG~l 270 (928)
T PF04762_consen 236 RRVIRVYSRE-GELQST-SEPVDGLEGALSWRPSGNL 270 (928)
T ss_pred eeEEEEECCC-ceEEec-cccCCCccCCccCCCCCCE
Confidence 578999965 654433 3356788889999998864
No 313
>KOG1275|consensus
Probab=97.38 E-value=0.0074 Score=54.86 Aligned_cols=171 Identities=14% Similarity=0.201 Sum_probs=106.8
Q ss_pred eecccccEEEEEECCCCc---eeEec-cccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe-CCcceeEEEccCCCE
Q psy6442 21 FEGHKGCVWGVDINKDAS---KAASG-AADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF-GAVPNSLEISRDGTT 95 (231)
Q Consensus 21 l~gH~~~V~~~~~~~~~~---~~~s~-~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~ 95 (231)
..||+..+-.++++.... .-.++ +.-..-.+++.+.+|..-|+|.+-|..+.+.+.++.. ...+.+ ++-.|+.
T Consensus 152 ~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSD--fDv~GNl 229 (1118)
T KOG1275|consen 152 MGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISD--FDVQGNL 229 (1118)
T ss_pred ecchhhheeeeecccceeeeeeeccCCceEEEEecCcEEEeecccceEEeecCCcCceeeeeeccccceee--eeccCCe
Confidence 345666666666654321 11111 1112224678899999999999999999998888764 333333 3444555
Q ss_pred EEEE----------cCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCC---Ccc-eeeec
Q psy6442 96 ITVT----------HGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYS---TGA-EIESF 161 (231)
Q Consensus 96 ~~~~----------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~---~~~-~~~~~ 161 (231)
++.. .|.-+.+||++..+.+..+..+.....+.+.+. -...++..+..|.....|.. ... ....+
T Consensus 230 LitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Ps-l~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v 308 (1118)
T KOG1275|consen 230 LITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPS-LTTRLAVTSQSGQFQFVDTATLSNPPAGVKMV 308 (1118)
T ss_pred EEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhccc-ccceEEEEecccceeeccccccCCCccceeEE
Confidence 5432 234577899998888777665543333333222 23346666778888887742 211 11222
Q ss_pred cCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 162 KGHFGPIHCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 162 ~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
.--...+..+.+|++++.+|-+..+|.|.+|--
T Consensus 309 ~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~ 341 (1118)
T KOG1275|consen 309 NPNGSGISAFDISSNGDALAFGDHEGHVNLWAD 341 (1118)
T ss_pred ccCCCcceeEEecCCCceEEEecccCcEeeecC
Confidence 222334899999999999999999999999983
No 314
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=97.38 E-value=0.045 Score=43.16 Aligned_cols=159 Identities=13% Similarity=0.192 Sum_probs=95.6
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCceEEEEe------CCcceeEEEccCCCEEEEEcC---------CeEEEEECCCcceEE
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAEVQKLEF------GAVPNSLEISRDGTTITVTHG---------SCVTFLDANSLELIK 116 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~~---------~~i~~~d~~~~~~~~ 116 (231)
+..|+.+..++ +.++|..+++....... ...++.+++.|+|...+.... +.+..++.. .+...
T Consensus 51 ~g~l~v~~~~~-~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~ 128 (246)
T PF08450_consen 51 DGRLYVADSGG-IAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTV 128 (246)
T ss_dssp TSEEEEEETTC-EEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEE
T ss_pred CCEEEEEEcCc-eEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEE
Confidence 35566666544 55569888866544443 135789999999985544321 346666665 33222
Q ss_pred eeeccceeEEEEEEecCCCCEEE-EecCCCeEEEEeCCCc-c------eeeeccCCCCCeeEEEEcCCCCEEEEeeCCCc
Q psy6442 117 EHKVPAQVHSASLLLNSERPIFV-CGGEDLKMYKFDYSTG-A------EIESFKGHFGPIHCVKFSPDGELYASGSEDGT 188 (231)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~-~g~~d~~i~~~d~~~~-~------~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~ 188 (231)
....-...+.+.+ +++++.+. +-+..++|+.++.... . ....+..-.+..-.+++.++|+++++.-..+.
T Consensus 129 ~~~~~~~pNGi~~--s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~ 206 (246)
T PF08450_consen 129 VADGLGFPNGIAF--SPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGR 206 (246)
T ss_dssp EEEEESSEEEEEE--ETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTE
T ss_pred EecCcccccceEE--CCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCE
Confidence 2221122233344 78887654 5677788999988532 2 12223322334778999999999998888999
Q ss_pred EEEEeCCCCCeeeeeeccCCcccCCCCC
Q psy6442 189 LRLWQTNVGKTYGLWKCIEGGLNNSLGL 216 (231)
Q Consensus 189 v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 216 (231)
|.+++.. |+.....+.- ...+..+.|
T Consensus 207 I~~~~p~-G~~~~~i~~p-~~~~t~~~f 232 (246)
T PF08450_consen 207 IVVFDPD-GKLLREIELP-VPRPTNCAF 232 (246)
T ss_dssp EEEEETT-SCEEEEEE-S-SSSEEEEEE
T ss_pred EEEECCC-ccEEEEEcCC-CCCEEEEEE
Confidence 9999998 8888777653 234444444
No 315
>KOG1920|consensus
Probab=97.34 E-value=0.015 Score=54.42 Aligned_cols=199 Identities=15% Similarity=0.172 Sum_probs=109.0
Q ss_pred cCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccc---------cccccCCCEE----------EEEeCCCC
Q psy6442 3 VDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAA---------DFQAKNNTRL----------ISCAEDKT 63 (231)
Q Consensus 3 ~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~---------d~~~~~~~~l----------~s~s~D~t 63 (231)
.+|.+.+.++.++..--. ..-.+.|.++.|+||++.++-... +|.+-..+.| ++.|+.+.
T Consensus 88 ~~G~iilvd~et~~~eiv-g~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrk 166 (1265)
T KOG1920|consen 88 ALGDIILVDPETLELEIV-GNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRK 166 (1265)
T ss_pred cCCcEEEEcccccceeee-eeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhccccccccccccccceeccccc
Confidence 356666777666654221 123457889999999886654322 2333222223 55555441
Q ss_pred EEEEeCCCCCc-----e------EEEEeCCcceeEEEccCCCEEEEE-----cC-CeEEEEECCCcceEEeeeccceeEE
Q psy6442 64 VRLWDVSASAE-----V------QKLEFGAVPNSLEISRDGTTITVT-----HG-SCVTFLDANSLELIKEHKVPAQVHS 126 (231)
Q Consensus 64 i~iwd~~~~~~-----~------~~~~~~~~~~~v~~~~~~~~~~~~-----~~-~~i~~~d~~~~~~~~~~~~~~~~~~ 126 (231)
=-=+.-..++. + ..++....-.++.|..||.+++++ .+ ..+++||.. + .+.....+.....
T Consensus 167 eTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g-~Lns~se~~~~l~ 244 (1265)
T KOG1920|consen 167 ETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYDRE-G-ALNSTSEPVEGLQ 244 (1265)
T ss_pred ceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEeccc-c-hhhcccCcccccc
Confidence 11111111100 0 001122334569999999988773 34 689999976 2 2222222221122
Q ss_pred EEEEecCCCCEEEEec---CCCeEEEEeCCCcceee----eccCCCCCeeEEEEcCCCCEEEE---eeCCCcEEEEeCCC
Q psy6442 127 ASLLLNSERPIFVCGG---EDLKMYKFDYSTGAEIE----SFKGHFGPIHCVKFSPDGELYAS---GSEDGTLRLWQTNV 196 (231)
Q Consensus 127 ~~~~~~~~~~~~~~g~---~d~~i~~~d~~~~~~~~----~~~~h~~~V~~v~~spd~~~laS---~s~d~~v~iwd~~~ 196 (231)
-++.+.|.|..+++-. .|..|.+|+- .|.... .++....+|..++|+.++.+||. +.....|++|-+.+
T Consensus 245 ~~LsWkPsgs~iA~iq~~~sd~~IvffEr-NGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~N 323 (1265)
T KOG1920|consen 245 HSLSWKPSGSLIAAIQCKTSDSDIVFFER-NGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGN 323 (1265)
T ss_pred cceeecCCCCeEeeeeecCCCCcEEEEec-CCccccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecC
Confidence 2344477787777642 3456877753 333222 23334455999999999999988 56666699999866
Q ss_pred CCee--eeeec
Q psy6442 197 GKTY--GLWKC 205 (231)
Q Consensus 197 ~~~~--~~~~~ 205 (231)
-.-+ +.|+.
T Consensus 324 yhWYLKq~l~~ 334 (1265)
T KOG1920|consen 324 YHWYLKQELQF 334 (1265)
T ss_pred eEEEEEEEEec
Confidence 5432 44553
No 316
>KOG4640|consensus
Probab=97.28 E-value=0.0015 Score=56.76 Aligned_cols=72 Identities=19% Similarity=0.221 Sum_probs=61.7
Q ss_pred EecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCee-EEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeee
Q psy6442 130 LLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIH-CVKFSPDGELYASGSEDGTLRLWQTNVGKTYGL 202 (231)
Q Consensus 130 ~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~-~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~ 202 (231)
.++|.-.++|.+..++.+.+..+. -+.+.+++-|..+++ +++|.|||.+||.|-.||+|+|-|+.++.....
T Consensus 27 ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~ 99 (665)
T KOG4640|consen 27 EWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVS 99 (665)
T ss_pred EEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceec
Confidence 348888999999999988887766 677888877777777 999999999999999999999999998876544
No 317
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.25 E-value=0.061 Score=47.80 Aligned_cols=166 Identities=13% Similarity=0.127 Sum_probs=102.8
Q ss_pred EEEEEEC--CCCceeEecccccccc--CCCEEE-EEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEc--
Q psy6442 28 VWGVDIN--KDASKAASGAADFQAK--NNTRLI-SCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH-- 100 (231)
Q Consensus 28 V~~~~~~--~~~~~~~s~~~d~~~~--~~~~l~-s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-- 100 (231)
++.+.|. |...+++-++....+. +++.+. +.-..+.+-+.|..+.+....+..+..+..+.++|++..++++.
T Consensus 176 ~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyN 255 (635)
T PRK02888 176 IHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYN 255 (635)
T ss_pred ccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccC
Confidence 3444443 4444544444332222 333332 33344566677888777777777777888888888888877653
Q ss_pred ---------------------------------------CCeEEEEECCC-----cceEEeeeccceeEEEEEEecCCCC
Q psy6442 101 ---------------------------------------GSCVTFLDANS-----LELIKEHKVPAQVHSASLLLNSERP 136 (231)
Q Consensus 101 ---------------------------------------~~~i~~~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (231)
++.+.++|..+ ...+..+..+...+.+. .+|+++
T Consensus 256 sE~G~tl~em~a~e~d~~vvfni~~iea~vkdGK~~~V~gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~--vSPDGk 333 (635)
T PRK02888 256 SEEGVTLAEMMAAERDWVVVFNIARIEEAVKAGKFKTIGGSKVPVVDGRKAANAGSALTRYVPVPKNPHGVN--TSPDGK 333 (635)
T ss_pred cccCcceeeeccccCceEEEEchHHHHHhhhCCCEEEECCCEEEEEECCccccCCcceEEEEECCCCccceE--ECCCCC
Confidence 13355556554 33444444444444433 488888
Q ss_pred EEEEe-cCCCeEEEEeCCCcce------------eeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCC
Q psy6442 137 IFVCG-GEDLKMYKFDYSTGAE------------IESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNV 196 (231)
Q Consensus 137 ~~~~g-~~d~~i~~~d~~~~~~------------~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~ 196 (231)
.++.+ ..+.++-++|+.+.+. ..+.+--.+ ....+|.++|..+.|---|..|-.||+..
T Consensus 334 ylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlG-PLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 334 YFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLG-PLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred EEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCCC-cceEEECCCCCEEEeEeecceeEEEehHH
Confidence 76655 4577888999876442 233332222 34578999999999999999999999865
No 318
>KOG2114|consensus
Probab=97.23 E-value=0.047 Score=49.50 Aligned_cols=144 Identities=15% Similarity=0.234 Sum_probs=85.4
Q ss_pred CEEEEEeCCCC-----EEEEeCCCC------Cce---EEEE--eC---CcceeEEEccCCCEEEEEc-CCeEEEEECCC-
Q psy6442 53 TRLISCAEDKT-----VRLWDVSAS------AEV---QKLE--FG---AVPNSLEISRDGTTITVTH-GSCVTFLDANS- 111 (231)
Q Consensus 53 ~~l~s~s~D~t-----i~iwd~~~~------~~~---~~~~--~~---~~~~~v~~~~~~~~~~~~~-~~~i~~~d~~~- 111 (231)
..|++-+.|++ ++|||+... .+. +... .+ .++..++++.+-+.++++. +|.|..+...-
T Consensus 78 ~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~ 157 (933)
T KOG2114|consen 78 NFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDIL 157 (933)
T ss_pred eEEEEEeecCCCCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcch
Confidence 46888888765 899998643 223 1122 12 3456888888888887775 56777665321
Q ss_pred --cc--eEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcc-eeeeccCCCCCeeEEEEcCCCCEEEEeeCC
Q psy6442 112 --LE--LIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA-EIESFKGHFGPIHCVKFSPDGELYASGSED 186 (231)
Q Consensus 112 --~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~-~~~~~~~h~~~V~~v~~spd~~~laS~s~d 186 (231)
.. ..-.++...+++...+...+...++++ ...+|..|.+.... .+..+..|..+++|.++++.-..++.|+ .
T Consensus 158 RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~--Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~-~ 234 (933)
T KOG2114|consen 158 RDRGSRQDYSHRGKEPITGLALRSDGKSVLFVA--TTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG-S 234 (933)
T ss_pred hccccceeeeccCCCCceeeEEecCCceeEEEE--ecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec-C
Confidence 11 111233445666666543333323333 44556666665323 3555778889999999999766455444 3
Q ss_pred CcEEEEeCCCCCe
Q psy6442 187 GTLRLWQTNVGKT 199 (231)
Q Consensus 187 ~~v~iwd~~~~~~ 199 (231)
..|.+|+....+.
T Consensus 235 e~l~fY~sd~~~~ 247 (933)
T KOG2114|consen 235 EFLYFYDSDGRGP 247 (933)
T ss_pred ceEEEEcCCCcce
Confidence 4588888754443
No 319
>KOG3617|consensus
Probab=97.22 E-value=0.00099 Score=59.91 Aligned_cols=110 Identities=19% Similarity=0.245 Sum_probs=77.9
Q ss_pred cceeEEEccCCCEEEEE-----cCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcce
Q psy6442 83 VPNSLEISRDGTTITVT-----HGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAE 157 (231)
Q Consensus 83 ~~~~v~~~~~~~~~~~~-----~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~ 157 (231)
.+.-.+|+|....+++. .++.+.++- .++++.+....|....+.+| +|...+++.|=+.+.+.+|...+.+.
T Consensus 17 vsti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~P~hatSLCW--Hpe~~vLa~gwe~g~~~v~~~~~~e~ 93 (1416)
T KOG3617|consen 17 VSTISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTYPVHATSLCW--HPEEFVLAQGWEMGVSDVQKTNTTET 93 (1416)
T ss_pred cccccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCcccccceehhhhcc--ChHHHHHhhccccceeEEEecCCcee
Confidence 34555788887776653 245565542 23333333344444444555 88888888888888999998765443
Q ss_pred eeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCC
Q psy6442 158 IESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 158 ~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~ 195 (231)
.....-|.++|.-+.|||+|..++|+..-|.|.+|...
T Consensus 94 htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 94 HTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred eeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 33345799999999999999999999999999999864
No 320
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.18 E-value=0.034 Score=47.92 Aligned_cols=142 Identities=18% Similarity=0.200 Sum_probs=73.8
Q ss_pred cEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcCCeEEE
Q psy6442 27 CVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTF 106 (231)
Q Consensus 27 ~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~ 106 (231)
....+..+|.|+ .++. ..||.-.|+.....+ ... ........|.+.+.+.+....+.|.+
T Consensus 34 ~p~~ls~npngr---------------~v~V-~g~geY~iyt~~~~r---~k~-~G~g~~~vw~~~n~yAv~~~~~~I~I 93 (443)
T PF04053_consen 34 YPQSLSHNPNGR---------------FVLV-CGDGEYEIYTALAWR---NKA-FGSGLSFVWSSRNRYAVLESSSTIKI 93 (443)
T ss_dssp --SEEEE-TTSS---------------EEEE-EETTEEEEEETTTTE---EEE-EEE-SEEEE-TSSEEEEE-TTS-EEE
T ss_pred CCeeEEECCCCC---------------EEEE-EcCCEEEEEEccCCc---ccc-cCceeEEEEecCccEEEEECCCeEEE
Confidence 355677777644 3444 457777777733222 211 23456678888666555555677887
Q ss_pred EECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCC
Q psy6442 107 LDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSED 186 (231)
Q Consensus 107 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d 186 (231)
+.--.....+.+..+..+. .+ .+ |.++...+.+ .|.+||+.+++.+..+.-. +|..|.||+++.++|-.+.+
T Consensus 94 ~kn~~~~~~k~i~~~~~~~--~I--f~-G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~ 165 (443)
T PF04053_consen 94 YKNFKNEVVKSIKLPFSVE--KI--FG-GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD 165 (443)
T ss_dssp EETTEE-TT-----SS-EE--EE--E--SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S-
T ss_pred EEcCccccceEEcCCcccc--eE--Ec-CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC
Confidence 6432222222333333222 22 12 5556655444 7899999999999888633 48999999999999988865
Q ss_pred CcEEEEeCCCC
Q psy6442 187 GTLRLWQTNVG 197 (231)
Q Consensus 187 ~~v~iwd~~~~ 197 (231)
++.|.+....
T Consensus 166 -~i~il~~~~~ 175 (443)
T PF04053_consen 166 -SIYILKYNLE 175 (443)
T ss_dssp -SEEEEEE-HH
T ss_pred -eEEEEEecch
Confidence 5888775443
No 321
>KOG1912|consensus
Probab=97.15 E-value=0.0034 Score=56.04 Aligned_cols=131 Identities=13% Similarity=0.168 Sum_probs=90.9
Q ss_pred cEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeC-CcceeEEEccCCCEEEEEcCCeEE
Q psy6442 27 CVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFG-AVPNSLEISRDGTTITVTHGSCVT 105 (231)
Q Consensus 27 ~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~i~ 105 (231)
.-.+++|+|.| .++-| ....|-+-|.++-+.+..+++. ..++.+.|.|.....
T Consensus 17 N~~A~Dw~~~G----------------LiAyg-shslV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~--------- 70 (1062)
T KOG1912|consen 17 NRNAADWSPSG----------------LIAYG-SHSLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPR--------- 70 (1062)
T ss_pred cccccccCccc----------------eEEEe-cCceEEEEehhhhhhhhccccCccceeEEEeccCCCch---------
Confidence 34567888765 22323 3456778888887777777654 457777777743211
Q ss_pred EEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCC---C-CEEE
Q psy6442 106 FLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPD---G-ELYA 181 (231)
Q Consensus 106 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd---~-~~la 181 (231)
. .........+++++.-.|+|-+||...+..+..+..|..++-.+.|-|. . .+|+
T Consensus 71 -----------------~----llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~Ll 129 (1062)
T KOG1912|consen 71 -----------------D----LLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLL 129 (1062)
T ss_pred -----------------h----ccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeE
Confidence 0 0100123445778888899999999988888888889999999999884 3 4677
Q ss_pred EeeCCCcEEEEeCCCCCeeeeee
Q psy6442 182 SGSEDGTLRLWQTNVGKTYGLWK 204 (231)
Q Consensus 182 S~s~d~~v~iwd~~~~~~~~~~~ 204 (231)
.-..-.+|.+|+..+|..+..-+
T Consensus 130 aIh~ss~lvLwntdtG~k~Wk~~ 152 (1062)
T KOG1912|consen 130 AIHGSSTLVLWNTDTGEKFWKYD 152 (1062)
T ss_pred EecCCcEEEEEEccCCceeeccc
Confidence 77788999999999998654333
No 322
>KOG1645|consensus
Probab=97.14 E-value=0.0054 Score=50.78 Aligned_cols=164 Identities=13% Similarity=0.017 Sum_probs=92.9
Q ss_pred eeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeE
Q psy6442 8 MLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSL 87 (231)
Q Consensus 8 ~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v 87 (231)
+..+..+-+-+.-+.+|...|..++|+|. +...+..++.+.+|+|.|+++..++........+.++
T Consensus 176 ~~l~~~~fkssq~lp~~g~~IrdlafSp~--------------~~GLl~~asl~nkiki~dlet~~~vssy~a~~~~wSC 241 (463)
T KOG1645|consen 176 QKLESHDFKSSQILPGEGSFIRDLAFSPF--------------NEGLLGLASLGNKIKIMDLETSCVVSSYIAYNQIWSC 241 (463)
T ss_pred EEeccCCcchhhcccccchhhhhhccCcc--------------ccceeeeeccCceEEEEecccceeeeheeccCCceee
Confidence 33333333334444556666666666664 4556889999999999999998888877777889999
Q ss_pred EEccCCCE-EEEEc-CCeEEEEECCCcceE-Eeeec---cceeEEEEE----EecCCCCEEEEecCCCeEEEEeCCCcce
Q psy6442 88 EISRDGTT-ITVTH-GSCVTFLDANSLELI-KEHKV---PAQVHSASL----LLNSERPIFVCGGEDLKMYKFDYSTGAE 157 (231)
Q Consensus 88 ~~~~~~~~-~~~~~-~~~i~~~d~~~~~~~-~~~~~---~~~~~~~~~----~~~~~~~~~~~g~~d~~i~~~d~~~~~~ 157 (231)
+|.-+... ++++. .|.+.++|.+..+-. ..... ..++..+.. ...+.+.+++....+-+.|..-...+..
T Consensus 242 ~wDlde~h~IYaGl~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~l~f~ei~~s~~~~ 321 (463)
T KOG1645|consen 242 CWDLDERHVIYAGLQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTVLQFYEIVFSAECL 321 (463)
T ss_pred eeccCCcceeEEeccCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehhhhhhhhhccccCC
Confidence 99988764 55554 578899998754321 11110 011111110 0123444556555555433322222222
Q ss_pred eeecc-CCCCCeeEEEEcCC-CCEEEEeeC
Q psy6442 158 IESFK-GHFGPIHCVKFSPD-GELYASGSE 185 (231)
Q Consensus 158 ~~~~~-~h~~~V~~v~~spd-~~~laS~s~ 185 (231)
...++ +..+...++++.+- ++.|+|.-.
T Consensus 322 p~vlele~pG~cismqy~~~snh~l~tyRs 351 (463)
T KOG1645|consen 322 PCVLELEPPGICISMQYHGVSNHLLLTYRS 351 (463)
T ss_pred CcccccCCCcceeeeeecCccceEEEEecC
Confidence 22222 23456666777663 345555543
No 323
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.12 E-value=0.022 Score=52.07 Aligned_cols=133 Identities=14% Similarity=0.174 Sum_probs=85.5
Q ss_pred eCCCCEEEEeCCCCCceEEEEeCCcceeEEEccC--------CCEEEEEcCCeEEEEECCCcc--eEEe--eeccceeEE
Q psy6442 59 AEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRD--------GTTITVTHGSCVTFLDANSLE--LIKE--HKVPAQVHS 126 (231)
Q Consensus 59 s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~--------~~~~~~~~~~~i~~~d~~~~~--~~~~--~~~~~~~~~ 126 (231)
.....+.-.|+..|+.+........+.-..+.|+ .++++...++.+..||.+-.. .+.. +........
T Consensus 501 ~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~F 580 (794)
T PF08553_consen 501 NNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNF 580 (794)
T ss_pred CCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCc
Confidence 3457788889999998888776543323334442 234445566788889977432 2211 111122222
Q ss_pred EEEEecCCCCEEEEecCCCeEEEEeCCCcceee-eccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 127 ASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIE-SFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 127 ~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~-~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
.++....+| .+|.|+.+|.||+||- .+..-. .+++-..||..|..+.||++++..+ +..+-|.++
T Consensus 581 s~~aTt~~G-~iavgs~~G~IRLyd~-~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t 646 (794)
T PF08553_consen 581 SCFATTEDG-YIAVGSNKGDIRLYDR-LGKRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLIDT 646 (794)
T ss_pred eEEEecCCc-eEEEEeCCCcEEeecc-cchhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence 233334444 5889999999999994 343333 3567789999999999999887665 455888885
No 324
>KOG0882|consensus
Probab=97.07 E-value=0.0055 Score=51.48 Aligned_cols=144 Identities=19% Similarity=0.223 Sum_probs=96.1
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCceEEEE----eCCcceeEEEccCCCEEEE-Ec-CCeEEEEECCCcceEEeeeccceeE
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAEVQKLE----FGAVPNSLEISRDGTTITV-TH-GSCVTFLDANSLELIKEHKVPAQVH 125 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~-~~-~~~i~~~d~~~~~~~~~~~~~~~~~ 125 (231)
.+.+.++|.||.+|.|--..-.-+..+. +-..+.+++.+.++..... .. +..++++|..+...+..++......
T Consensus 20 a~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg 99 (558)
T KOG0882|consen 20 AKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPG 99 (558)
T ss_pred hheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccccCCC
Confidence 4568999999999999754422222221 2346678888888876654 33 5577888876665554444433223
Q ss_pred EEEEEecCC---CCEEEEecCCCeEEEEeCCCcc-ee-eeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCC
Q psy6442 126 SASLLLNSE---RPIFVCGGEDLKMYKFDYSTGA-EI-ESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 126 ~~~~~~~~~---~~~~~~g~~d~~i~~~d~~~~~-~~-~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~ 195 (231)
.+.+...+. ..+.++.-.++.+.++|..... +. ..-.-|..||..+.+.|.+.-+.|....|-|.-|...
T Consensus 100 ~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e 174 (558)
T KOG0882|consen 100 FAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAE 174 (558)
T ss_pred ceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCC
Confidence 334433332 1333444567889999976443 23 2334599999999999999999999999999999976
No 325
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=97.06 E-value=0.019 Score=49.26 Aligned_cols=160 Identities=18% Similarity=0.196 Sum_probs=85.7
Q ss_pred CceeeeccCCCe--EeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEE--EeCCCCCceEEEEeC
Q psy6442 6 KPMLRQGDTGDW--IGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRL--WDVSASAEVQKLEFG 81 (231)
Q Consensus 6 ~~~~~~~~~g~~--i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~i--wd~~~~~~~~~~~~~ 81 (231)
.+++++.++|+. +.++.++.. .-+|+|||+++ +.+...|+...| .|+..+...+.....
T Consensus 219 ~i~~~~l~~g~~~~i~~~~g~~~---~P~fspDG~~l--------------~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~ 281 (425)
T COG0823 219 RIYYLDLNTGKRPVILNFNGNNG---APAFSPDGSKL--------------AFSSSRDGSPDIYLMDLDGKNLPRLTNGF 281 (425)
T ss_pred eEEEEeccCCccceeeccCCccC---CccCCCCCCEE--------------EEEECCCCCccEEEEcCCCCcceecccCC
Confidence 366677766653 333444433 34677877554 456666776555 467666643322222
Q ss_pred CcceeEEEccCCCEEEEEcC--C--eEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCC-C--eEEEEeCCC
Q psy6442 82 AVPNSLEISRDGTTITVTHG--S--CVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGED-L--KMYKFDYST 154 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~--~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d-~--~i~~~d~~~ 154 (231)
..-..=.|+|||+.++...+ + .|.+++....... .......... ...++|++..++..+.. + .|.+.|..+
T Consensus 282 gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~-riT~~~~~~~-~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~ 359 (425)
T COG0823 282 GINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVT-RLTFSGGGNS-NPVWSPDGDKIVFESSSGGQWDIDKNDLAS 359 (425)
T ss_pred ccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCcee-EeeccCCCCc-CccCCCCCCEEEEEeccCCceeeEEeccCC
Confidence 22234478999997664332 2 5566666555442 2222111111 23348888888766532 3 366666665
Q ss_pred cceeeeccCCCCCeeEEEEcCCCCEEEEeeC
Q psy6442 155 GAEIESFKGHFGPIHCVKFSPDGELYASGSE 185 (231)
Q Consensus 155 ~~~~~~~~~h~~~V~~v~~spd~~~laS~s~ 185 (231)
+..++.+. +......-.+.|++..+...+.
T Consensus 360 ~~~~~~lt-~~~~~e~ps~~~ng~~i~~~s~ 389 (425)
T COG0823 360 GGKIRILT-STYLNESPSWAPNGRMIMFSSG 389 (425)
T ss_pred CCcEEEcc-ccccCCCCCcCCCCceEEEecc
Confidence 55333332 2223334567888876655543
No 326
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.06 E-value=0.15 Score=43.11 Aligned_cols=169 Identities=15% Similarity=0.216 Sum_probs=113.0
Q ss_pred CEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEc----CCeEEEEECCCcceEEeeeccceeEEEE
Q psy6442 53 TRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH----GSCVTFLDANSLELIKEHKVPAQVHSAS 128 (231)
Q Consensus 53 ~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 128 (231)
+..++...+..|.+.|....+....+..+..+..++++|++..++++. ++.+...|..+...++........ ..
T Consensus 87 ~vyv~~~~~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P--~~ 164 (381)
T COG3391 87 KVYVTTGDSNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP--TG 164 (381)
T ss_pred eEEEecCCCCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc--ce
Confidence 356666667999999988888888888888899999999999888754 368888998888777764433212 33
Q ss_pred EEecCCCCEEEEe-cCCCeEEEEeCCCcceee-e---ccCCCCCeeEEEEcCCCCEEEEe-eCC--CcEEEEeCCCCCee
Q psy6442 129 LLLNSERPIFVCG-GEDLKMYKFDYSTGAEIE-S---FKGHFGPIHCVKFSPDGELYASG-SED--GTLRLWQTNVGKTY 200 (231)
Q Consensus 129 ~~~~~~~~~~~~g-~~d~~i~~~d~~~~~~~~-~---~~~h~~~V~~v~~spd~~~laS~-s~d--~~v~iwd~~~~~~~ 200 (231)
+..+|++..+... ..+.++.++|.......+ . ...-......+.++|++.++-.. ..+ +.+.+.|..+++..
T Consensus 165 ~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~ 244 (381)
T COG3391 165 VAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVT 244 (381)
T ss_pred EEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEE
Confidence 4458888855544 467889999976554442 1 01112234678999999854444 333 68999999888765
Q ss_pred eeeeccCCc-ccCCCCCCccccccc
Q psy6442 201 GLWKCIEGG-LNNSLGLDSSGHLNN 224 (231)
Q Consensus 201 ~~~~~~~~~-~~~~~~~~~~~~~~~ 224 (231)
.. ....+. ....+.+.++|...-
T Consensus 245 ~~-~~~~~~~~~~~v~~~p~g~~~y 268 (381)
T COG3391 245 AT-DLPVGSGAPRGVAVDPAGKAAY 268 (381)
T ss_pred Ee-ccccccCCCCceeECCCCCEEE
Confidence 43 112222 455566666665543
No 327
>KOG1920|consensus
Probab=97.06 E-value=0.051 Score=51.04 Aligned_cols=141 Identities=16% Similarity=0.188 Sum_probs=82.5
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcC-CeEEEEECCCcceEEe-------------
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHG-SCVTFLDANSLELIKE------------- 117 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~i~~~d~~~~~~~~~------------- 117 (231)
...++.+..+|.|.+-|..+......-.....+...+|+||+..++...+ .++.+.. .+..++..
T Consensus 80 ~~~i~v~~~~G~iilvd~et~~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT-~~f~~i~E~~L~~d~~~~sk~ 158 (1265)
T KOG1920|consen 80 TNSICVITALGDIILVDPETLELEIVGNVDNGISAASWSPDEELLALITGRQTLLFMT-KDFEPIAEKPLDADDERKSKF 158 (1265)
T ss_pred cceEEEEecCCcEEEEcccccceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEe-ccccchhcccccccccccccc
Confidence 44566777789999988876654333334567889999999998765544 4444432 11111000
Q ss_pred -----------eec------------c--------ceeEEEEEEecCCCCEEEEe-----cCCCeEEEEeCCCcceeeec
Q psy6442 118 -----------HKV------------P--------AQVHSASLLLNSERPIFVCG-----GEDLKMYKFDYSTGAEIESF 161 (231)
Q Consensus 118 -----------~~~------------~--------~~~~~~~~~~~~~~~~~~~g-----~~d~~i~~~d~~~~~~~~~~ 161 (231)
+.. + ...+...+.+..+|.+++.. .....|++||-+ +.+-..-
T Consensus 159 v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~s 237 (1265)
T KOG1920|consen 159 VNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTS 237 (1265)
T ss_pred ceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEeccc-chhhccc
Confidence 000 0 00111224457888887762 223679999875 3322211
Q ss_pred cCCCCCeeEEEEcCCCCEEEEee---CCCcEEEEeC
Q psy6442 162 KGHFGPIHCVKFSPDGELYASGS---EDGTLRLWQT 194 (231)
Q Consensus 162 ~~h~~~V~~v~~spd~~~laS~s---~d~~v~iwd~ 194 (231)
+.-.+.=.+++|-|.|.++|+-. .|+.|.+|.-
T Consensus 238 e~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffEr 273 (1265)
T KOG1920|consen 238 EPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFER 273 (1265)
T ss_pred CcccccccceeecCCCCeEeeeeecCCCCcEEEEec
Confidence 11222335789999999998874 4667888874
No 328
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.01 E-value=0.17 Score=42.81 Aligned_cols=136 Identities=16% Similarity=0.228 Sum_probs=92.0
Q ss_pred CcceeEEEccCCCEEEEEc--CCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecC---CCeEEEEeCCCcc
Q psy6442 82 AVPNSLEISRDGTTITVTH--GSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGE---DLKMYKFDYSTGA 156 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---d~~i~~~d~~~~~ 156 (231)
..+..++.++.+..+++.. .+.+.+.|..................+. .++++..+..+.. +.++.+.|..+..
T Consensus 74 ~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~~P~~~~--~~~~~~~vYV~n~~~~~~~vsvid~~t~~ 151 (381)
T COG3391 74 VYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGLGPVGLA--VDPDGKYVYVANAGNGNNTVSVIDAATNK 151 (381)
T ss_pred ccccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeeccCCceEE--ECCCCCEEEEEecccCCceEEEEeCCCCe
Confidence 4567889999999877765 5789999977766666654433222333 3666655554433 6889999998888
Q ss_pred eeeeccCCCCCeeEEEEcCCCCE-EEEeeCCCcEEEEeCCCCCeeeeee----ccCCcccCCCCCCcccc
Q psy6442 157 EIESFKGHFGPIHCVKFSPDGEL-YASGSEDGTLRLWQTNVGKTYGLWK----CIEGGLNNSLGLDSSGH 221 (231)
Q Consensus 157 ~~~~~~~h~~~V~~v~~spd~~~-laS~s~d~~v~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 221 (231)
.+.+...-..+ ..++++|+|.. +++-+.++.|.+.|...-+... ++ .-....++-+.++++|.
T Consensus 152 ~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~~~~~~~~~~~~P~~i~v~~~g~ 219 (381)
T COG3391 152 VTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-GSVGSLVGVGTGPAGIAVDPDGN 219 (381)
T ss_pred EEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec-cccccccccCCCCceEEECCCCC
Confidence 77765433344 89999999984 4555689999999976665443 22 33445556667766665
No 329
>KOG1912|consensus
Probab=96.96 E-value=0.022 Score=51.08 Aligned_cols=83 Identities=13% Similarity=0.033 Sum_probs=54.8
Q ss_pred CceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe-CCcc
Q psy6442 6 KPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF-GAVP 84 (231)
Q Consensus 6 ~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~-~~~~ 84 (231)
-|-+-|..+-+.|+++.-|+..|..+.|+|..-...-.+- ....-.|+++.-.|.|.+||...+..+..+.. ..++
T Consensus 36 lV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~---~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~ 112 (1062)
T KOG1912|consen 36 LVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSP---SSSQLLIASADISGRIILVDFVLASVINWLSHSNDSV 112 (1062)
T ss_pred eEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCc---cccceeEEeccccCcEEEEEehhhhhhhhhcCCCcch
Confidence 3556676777889999999999999999986422111110 01234577888889999999987766655543 3344
Q ss_pred eeEEEcc
Q psy6442 85 NSLEISR 91 (231)
Q Consensus 85 ~~v~~~~ 91 (231)
..++|-+
T Consensus 113 qdl~W~~ 119 (1062)
T KOG1912|consen 113 QDLCWVP 119 (1062)
T ss_pred hheeeee
Confidence 5555543
No 330
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=96.92 E-value=0.24 Score=43.38 Aligned_cols=138 Identities=16% Similarity=0.185 Sum_probs=77.5
Q ss_pred CEEEEeCCCCCceEEEEeCCc-c------eeEEEc----cCCC---EEEEE-cCCeEEEEECCCcceEEeeeccceeEEE
Q psy6442 63 TVRLWDVSASAEVQKLEFGAV-P------NSLEIS----RDGT---TITVT-HGSCVTFLDANSLELIKEHKVPAQVHSA 127 (231)
Q Consensus 63 ti~iwd~~~~~~~~~~~~~~~-~------~~v~~~----~~~~---~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 127 (231)
+|.-.|..+++.+-..+.... . ....+. -++. .+++. .++.+.-+|..+.+.+........
T Consensus 257 ~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~~---- 332 (488)
T cd00216 257 SIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVEQ---- 332 (488)
T ss_pred eEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeecc----
Confidence 677888888887766543211 0 000111 1232 34443 467888899988887766543200
Q ss_pred EEEecCCCCEEEE-----------------ecCCCeEEEEeCCCcceeeeccCC--C------CCeeEEEEcCCCCEEEE
Q psy6442 128 SLLLNSERPIFVC-----------------GGEDLKMYKFDYSTGAEIESFKGH--F------GPIHCVKFSPDGELYAS 182 (231)
Q Consensus 128 ~~~~~~~~~~~~~-----------------g~~d~~i~~~d~~~~~~~~~~~~h--~------~~V~~v~~spd~~~laS 182 (231)
....++ +.+.+. ...++.+.-+|..+|+.+.+.... . .+...-...-.+.++..
T Consensus 333 ~~~~~~-~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~ 411 (488)
T cd00216 333 PMAYDP-GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFA 411 (488)
T ss_pred ccccCC-ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEE
Confidence 001122 111111 124577888898888877665422 1 11111011124567888
Q ss_pred eeCCCcEEEEeCCCCCeeeeeec
Q psy6442 183 GSEDGTLRLWQTNVGKTYGLWKC 205 (231)
Q Consensus 183 ~s~d~~v~iwd~~~~~~~~~~~~ 205 (231)
++.||.|..+|..+|+.....+.
T Consensus 412 g~~dG~l~ald~~tG~~lW~~~~ 434 (488)
T cd00216 412 GAADGYFRAFDATTGKELWKFRT 434 (488)
T ss_pred ECCCCeEEEEECCCCceeeEEEC
Confidence 88999999999999998766654
No 331
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=96.89 E-value=0.004 Score=35.75 Aligned_cols=33 Identities=24% Similarity=0.504 Sum_probs=29.5
Q ss_pred CCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCC
Q psy6442 165 FGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 165 ~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~ 198 (231)
..+|..++|+|...+||.++.+|.|.|+.+ +++
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~q 43 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQ 43 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCc
Confidence 356899999999999999999999999999 544
No 332
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=96.81 E-value=0.19 Score=40.22 Aligned_cols=146 Identities=17% Similarity=0.221 Sum_probs=87.1
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEee-------------
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEH------------- 118 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~------------- 118 (231)
++.|+.|..+| +.+++.........+.....+..+...|+-..+++-.++.+..+++.........
T Consensus 7 ~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~~~I~ql~vl~~~~~llvLsd~~l~~~~L~~l~~~~~~~~~~~~~~~~~~~ 85 (275)
T PF00780_consen 7 GDRLLVGTEDG-LYVYDLSDPSKPTRILKLSSITQLSVLPELNLLLVLSDGQLYVYDLDSLEPVSTSAPLAFPKSRSLPT 85 (275)
T ss_pred CCEEEEEECCC-EEEEEecCCccceeEeecceEEEEEEecccCEEEEEcCCccEEEEchhhccccccccccccccccccc
Confidence 56788887777 9999984333333333334588899999888888777899999987654433311
Q ss_pred ecc--ceeEEEE-EEecCCCCEEEEecCCCeEEEEeCCCc-----ceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEE
Q psy6442 119 KVP--AQVHSAS-LLLNSERPIFVCGGEDLKMYKFDYSTG-----AEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLR 190 (231)
Q Consensus 119 ~~~--~~~~~~~-~~~~~~~~~~~~g~~d~~i~~~d~~~~-----~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~ 190 (231)
..+ ..+...+ .........++. ....+|.+|..... ...+++. -...+.+++|. ++.++-+..++ ..
T Consensus 86 ~~~~~~~v~~f~~~~~~~~~~~L~v-a~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~--~~~i~v~~~~~-f~ 160 (275)
T PF00780_consen 86 KLPETKGVSFFAVNGGHEGSRRLCV-AVKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFL--GNKICVGTSKG-FY 160 (275)
T ss_pred cccccCCeeEEeeccccccceEEEE-EECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEe--CCEEEEEeCCc-eE
Confidence 111 1222222 111222333333 33446666655332 3445544 33678899998 44666666444 88
Q ss_pred EEeCCCCCeeeee
Q psy6442 191 LWQTNVGKTYGLW 203 (231)
Q Consensus 191 iwd~~~~~~~~~~ 203 (231)
+.|+.++....+.
T Consensus 161 ~idl~~~~~~~l~ 173 (275)
T PF00780_consen 161 LIDLNTGSPSELL 173 (275)
T ss_pred EEecCCCCceEEe
Confidence 8899888776554
No 333
>KOG2066|consensus
Probab=96.79 E-value=0.055 Score=48.71 Aligned_cols=106 Identities=15% Similarity=0.123 Sum_probs=74.3
Q ss_pred CCcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEE--
Q psy6442 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKL-- 78 (231)
Q Consensus 1 ~~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~-- 78 (231)
||+||+|.+-+..+++...++. -.-++-+++++|+-. -+..+++++||.-| +.++.-.-......+
T Consensus 89 CS~DGkv~I~sl~~~~~~~~~d-f~rpiksial~Pd~~----------~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l 156 (846)
T KOG2066|consen 89 CSDDGKVVIGSLFTDDEITQYD-FKRPIKSIALHPDFS----------RQQSKQFVSGGMAG-LVLSERNWLGNKDSVVL 156 (846)
T ss_pred ecCCCcEEEeeccCCccceeEe-cCCcceeEEeccchh----------hhhhhheeecCcce-EEEehhhhhcCccceee
Confidence 6899999999999999888765 346788999999721 13356788888777 766653322111111
Q ss_pred -EeCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeec
Q psy6442 79 -EFGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKV 120 (231)
Q Consensus 79 -~~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 120 (231)
.-.+++.++.|.. ..++.+.+-.++++|....+.+.....
T Consensus 157 ~~~eG~I~~i~W~g--~lIAWand~Gv~vyd~~~~~~l~~i~~ 197 (846)
T KOG2066|consen 157 SEGEGPIHSIKWRG--NLIAWANDDGVKVYDTPTRQRLTNIPP 197 (846)
T ss_pred ecCccceEEEEecC--cEEEEecCCCcEEEeccccceeeccCC
Confidence 2246788888874 577777788899999988777665544
No 334
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=96.74 E-value=0.25 Score=40.67 Aligned_cols=181 Identities=16% Similarity=0.161 Sum_probs=98.0
Q ss_pred CCceeeeccCCCeEeeeeccc-ccEE---EEEECCC----CceeEeccccccccCCCEEEEEeCCCCEEEEeCCCC----
Q psy6442 5 GKPMLRQGDTGDWIGTFEGHK-GCVW---GVDINKD----ASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSAS---- 72 (231)
Q Consensus 5 ~~~~~~~~~~g~~i~~l~gH~-~~V~---~~~~~~~----~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~---- 72 (231)
..|+|.|+.+.+.+.++.=.. ..+. .+.+..+ ..+++-|..-....+. ....|.|.++++...
T Consensus 2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~-----~~~~Gri~v~~i~~~~~~~ 76 (321)
T PF03178_consen 2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDP-----EPSSGRILVFEISESPENN 76 (321)
T ss_dssp -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSS-----S-S-EEEEEEEECSS----
T ss_pred cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccc-----cccCcEEEEEEEEcccccc
Confidence 357899998888887765222 2233 3444432 1222211110000000 001277889988873
Q ss_pred Cc---eEEEEeCCcceeEEEccCCCEEEEEcCCeEEEEECCCcc-eEEeeeccceeEEEEEEecCCCCEEEEecCCCeEE
Q psy6442 73 AE---VQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANSLE-LIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMY 148 (231)
Q Consensus 73 ~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~ 148 (231)
.. +.....+.++++++.- .+ .++++.++.+.+++....+ .......+.+....++.. .+..++.|.....+.
T Consensus 77 ~~l~~i~~~~~~g~V~ai~~~-~~-~lv~~~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~--~~~~I~vgD~~~sv~ 152 (321)
T PF03178_consen 77 FKLKLIHSTEVKGPVTAICSF-NG-RLVVAVGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSV--FKNYILVGDAMKSVS 152 (321)
T ss_dssp -EEEEEEEEEESS-EEEEEEE-TT-EEEEEETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEE--ETTEEEEEESSSSEE
T ss_pred eEEEEEEEEeecCcceEhhhh-CC-EEEEeecCEEEEEEccCcccchhhheecceEEEEEEec--cccEEEEEEcccCEE
Confidence 12 2333456778888766 33 4777778899998877666 444433333333333322 244677776665555
Q ss_pred E--EeCCCcceeeecc--CCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCC
Q psy6442 149 K--FDYSTGAEIESFK--GHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 149 ~--~d~~~~~~~~~~~--~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~ 195 (231)
+ |+....+ +..+. .....++++.|-+++..++.+..+|.+.++...
T Consensus 153 ~~~~~~~~~~-l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 153 LLRYDEENNK-LILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp EEEEETTTE--EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred EEEEEccCCE-EEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 4 4543222 22221 223457888888676799999999999999875
No 335
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=96.73 E-value=0.31 Score=41.65 Aligned_cols=144 Identities=15% Similarity=0.163 Sum_probs=88.7
Q ss_pred cCCCEEEEEeCCCCEEEEeCCCCC-----ceEEEEeCCcceeEEEcc-----CCCEEEEEcCCeEEEEECCCc-------
Q psy6442 50 KNNTRLISCAEDKTVRLWDVSASA-----EVQKLEFGAVPNSLEISR-----DGTTITVTHGSCVTFLDANSL------- 112 (231)
Q Consensus 50 ~~~~~l~s~s~D~ti~iwd~~~~~-----~~~~~~~~~~~~~v~~~~-----~~~~~~~~~~~~i~~~d~~~~------- 112 (231)
.+..+|+.||..|.+|||+...+. .+...+++.++..++.-+ +...+++-+-..+.+|.....
T Consensus 35 ~~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g 114 (418)
T PF14727_consen 35 SGSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHG 114 (418)
T ss_pred CCccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccC
Confidence 345689999999999999986543 344455667777776532 334677777777777764211
Q ss_pred -----ceEEeeeccceeEEEEEEe--cCC-CCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEee
Q psy6442 113 -----ELIKEHKVPAQVHSASLLL--NSE-RPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGS 184 (231)
Q Consensus 113 -----~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s 184 (231)
+.+.++..+......+.-. ... ..++..-+-||++.+|+.+.-...+.+.. .--.--+.|.|.-..|++++
T Consensus 115 ~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDsfvt~s 193 (418)
T PF14727_consen 115 NQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDSFVTAS 193 (418)
T ss_pred cEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCEEEEec
Confidence 1122233332222222211 122 34566778999999998765443333333 22223467888888889999
Q ss_pred CCCcEEEEeC
Q psy6442 185 EDGTLRLWQT 194 (231)
Q Consensus 185 ~d~~v~iwd~ 194 (231)
.+..|.-|..
T Consensus 194 ss~~l~~Yky 203 (418)
T PF14727_consen 194 SSWTLECYKY 203 (418)
T ss_pred CceeEEEecH
Confidence 8888888875
No 336
>KOG2041|consensus
Probab=96.73 E-value=0.016 Score=51.62 Aligned_cols=153 Identities=15% Similarity=0.128 Sum_probs=94.2
Q ss_pred cccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCc---------e------EEEE-eCCcceeEE
Q psy6442 25 KGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAE---------V------QKLE-FGAVPNSLE 88 (231)
Q Consensus 25 ~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~---------~------~~~~-~~~~~~~v~ 88 (231)
.....++.|+.+ ..+++.+|.||.+|+-.+.+... . ++++ +...+..+.
T Consensus 14 nvkL~c~~WNke---------------~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvT 78 (1189)
T KOG2041|consen 14 NVKLHCAEWNKE---------------SGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVT 78 (1189)
T ss_pred CceEEEEEEccc---------------CCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEE
Confidence 456788899876 45689999999999987754321 0 1111 345778888
Q ss_pred EccCCCEEEEEc-CCeEEEEECCCcceEEe-eeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCccee--eeccCC
Q psy6442 89 ISRDGTTITVTH-GSCVTFLDANSLELIKE-HKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEI--ESFKGH 164 (231)
Q Consensus 89 ~~~~~~~~~~~~-~~~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~--~~~~~h 164 (231)
|..+.+.+..+. ++-|.+|-+-.+.-..+ +....+....++.++.+|..+....+||.|.+=.+. |..+ +.+++.
T Consensus 79 WNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvd-GNRIwgKeLkg~ 157 (1189)
T KOG2041|consen 79 WNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVD-GNRIWGKELKGQ 157 (1189)
T ss_pred eccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeec-cceecchhcchh
Confidence 998888887765 56777776543322211 111122222334447777777666677666543332 2222 122221
Q ss_pred CCCeeEEEEcCCCCEEEEeeCCCcEEEEeCC
Q psy6442 165 FGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 165 ~~~V~~v~~spd~~~laS~s~d~~v~iwd~~ 195 (231)
....+.||||.+.+.-+-.+|.++|+|-+
T Consensus 158 --~l~hv~ws~D~~~~Lf~~ange~hlydnq 186 (1189)
T KOG2041|consen 158 --LLAHVLWSEDLEQALFKKANGETHLYDNQ 186 (1189)
T ss_pred --eccceeecccHHHHHhhhcCCcEEEeccc
Confidence 12367899999888888889999999964
No 337
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=96.59 E-value=0.27 Score=39.15 Aligned_cols=147 Identities=16% Similarity=0.166 Sum_probs=95.7
Q ss_pred CCEEEEEeCCC--CEEEEeCCCCCceEEEEeCCcce--eEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccceeEEE
Q psy6442 52 NTRLISCAEDK--TVRLWDVSASAEVQKLEFGAVPN--SLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHSA 127 (231)
Q Consensus 52 ~~~l~s~s~D~--ti~iwd~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 127 (231)
+..+-|+|.-| .|+.+|+.+++......++...+ .+....+.-..+.-..+...++|..+.+.+.++..+.+--.+
T Consensus 56 g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d~l~qLTWk~~~~f~yd~~tl~~~~~~~y~~EGWGL 135 (264)
T PF05096_consen 56 GTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGDKLYQLTWKEGTGFVYDPNTLKKIGTFPYPGEGWGL 135 (264)
T ss_dssp TEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEE-SSS--EE
T ss_pred CEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECCEEEEEEecCCeEEEEccccceEEEEEecCCcceEE
Confidence 44456666665 68899999999888887776543 445554433333445678889999999988888776544333
Q ss_pred EEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCC-----CCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeee
Q psy6442 128 SLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGH-----FGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGL 202 (231)
Q Consensus 128 ~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h-----~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~ 202 (231)
+ .++..++......+++.+|..+-+...++.-. ...++.+.|- +|.++|-.=....|..-|..+|++...
T Consensus 136 t----~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW~td~I~~Idp~tG~V~~~ 210 (264)
T PF05096_consen 136 T----SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYANVWQTDRIVRIDPETGKVVGW 210 (264)
T ss_dssp E----ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEEEETTSSEEEEEETTT-BEEEE
T ss_pred E----cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEEEeCCCCeEEEEeCCCCeEEEE
Confidence 3 35566777777888999998876665554321 2346677775 677888777788888999999998764
Q ss_pred e
Q psy6442 203 W 203 (231)
Q Consensus 203 ~ 203 (231)
.
T Consensus 211 i 211 (264)
T PF05096_consen 211 I 211 (264)
T ss_dssp E
T ss_pred E
Confidence 4
No 338
>KOG1832|consensus
Probab=96.56 E-value=0.0017 Score=58.75 Aligned_cols=164 Identities=16% Similarity=0.134 Sum_probs=101.1
Q ss_pred CcCCCceeeeccCCCeEeeeecccccEEEEEECCCCceeEecccccccc-------------------------C--CCE
Q psy6442 2 CVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK-------------------------N--NTR 54 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~-------------------------~--~~~ 54 (231)
+-.|.+.++++.+|.-...+.+|+.+|.-+.-+.+|....+.+....+. + ..+
T Consensus 1120 ~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~~~Hsf~ed~~vkFsn~~q~r 1199 (1516)
T KOG1832|consen 1120 SHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTGGPRHSFDEDKAVKFSNSLQFR 1199 (1516)
T ss_pred eccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhccccccCccccccccceeehhhhHHHH
Confidence 3468999999999999999999999999999999987666554321110 1 112
Q ss_pred EEEEeCCCCEEEEeCCCCCceEEEE-----eCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccceeEEEEE
Q psy6442 55 LISCAEDKTVRLWDVSASAEVQKLE-----FGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHSASL 129 (231)
Q Consensus 55 l~s~s~D~ti~iwd~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 129 (231)
++.+-. ..+.+||++++..+.++- ....-+.+.|+|+...++- + -.+||.+..+.++.++--.....-.
T Consensus 1200 ~~gt~~-d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIln--d--GvLWDvR~~~aIh~FD~ft~~~~G~- 1273 (1516)
T KOG1832|consen 1200 ALGTEA-DDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLILN--D--GVLWDVRIPEAIHRFDQFTDYGGGG- 1273 (1516)
T ss_pred Hhcccc-cceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEee--C--ceeeeeccHHHHhhhhhheeccccc-
Confidence 232222 457789999887765521 1223466778998876542 2 2478887766655543211111112
Q ss_pred EecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCE
Q psy6442 130 LLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGEL 179 (231)
Q Consensus 130 ~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~ 179 (231)
++|.+..++.-++ +||+++-.++++.+.-. =+.+.|+..|..
T Consensus 1274 -FHP~g~eVIINSE-----IwD~RTF~lLh~VP~Ld--qc~VtFNstG~V 1315 (1516)
T KOG1832|consen 1274 -FHPSGNEVIINSE-----IWDMRTFKLLHSVPSLD--QCAVTFNSTGDV 1315 (1516)
T ss_pred -ccCCCceEEeech-----hhhhHHHHHHhcCcccc--ceEEEeccCccc
Confidence 3677776666553 78888777665543211 234566666653
No 339
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=96.51 E-value=0.21 Score=43.18 Aligned_cols=134 Identities=12% Similarity=0.192 Sum_probs=69.1
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcCCeEEEEECCCc------------ceEEeee
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANSL------------ELIKEHK 119 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~------------~~~~~~~ 119 (231)
|..|...+. +.|.+||..+++.++.+.... +..|.|++++..++......+.+++-... .....++
T Consensus 117 G~LL~~~~~-~~i~~yDw~~~~~i~~i~v~~-vk~V~Ws~~g~~val~t~~~i~il~~~~~~~~~~~~~g~e~~f~~~~E 194 (443)
T PF04053_consen 117 GNLLGVKSS-DFICFYDWETGKLIRRIDVSA-VKYVIWSDDGELVALVTKDSIYILKYNLEAVAAIPEEGVEDAFELIHE 194 (443)
T ss_dssp SSSEEEEET-TEEEEE-TTT--EEEEESS-E--EEEEE-TTSSEEEEE-S-SEEEEEE-HHHHHHBTTTB-GGGEEEEEE
T ss_pred CcEEEEECC-CCEEEEEhhHcceeeEEecCC-CcEEEEECCCCEEEEEeCCeEEEEEecchhcccccccCchhceEEEEE
Confidence 445555554 489999999999998887654 79999999999888776666666553322 1112222
Q ss_pred ccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCC
Q psy6442 120 VPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~ 195 (231)
....+....| ..+ .++..... +++-+--.....+.++. .++.=+.+.|..+.+....+|+.|..+.+.
T Consensus 195 ~~~~IkSg~W--~~d--~fiYtT~~-~lkYl~~Ge~~~i~~ld---~~~yllgy~~~~~~ly~~Dr~~~v~~~~ld 262 (443)
T PF04053_consen 195 ISERIKSGCW--VED--CFIYTTSN-HLKYLVNGETGIIAHLD---KPLYLLGYLPKENRLYLIDRDGNVISYELD 262 (443)
T ss_dssp E-S--SEEEE--ETT--EEEEE-TT-EEEEEETTEEEEEEE-S---S--EEEEEETTTTEEEEE-TT--EEEEE--
T ss_pred ecceeEEEEE--EcC--EEEEEcCC-eEEEEEcCCcceEEEcC---CceEEEEEEccCCEEEEEECCCCEEEEEEC
Confidence 2334444445 222 44444444 55543211222234432 466777888877778778888888887663
No 340
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=96.35 E-value=0.39 Score=38.27 Aligned_cols=122 Identities=15% Similarity=0.288 Sum_probs=71.5
Q ss_pred EEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcC-CeEEEEECCCcceEEeeecc---ce---eEEEEE
Q psy6442 57 SCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHG-SCVTFLDANSLELIKEHKVP---AQ---VHSASL 129 (231)
Q Consensus 57 s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~i~~~d~~~~~~~~~~~~~---~~---~~~~~~ 129 (231)
-.=..++..+||..+.+.+.++.....-..++ .++..++++.+ ..+.++|..+.+..+..... .+ .+.+.+
T Consensus 105 LTWk~~~~f~yd~~tl~~~~~~~y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~ 182 (264)
T PF05096_consen 105 LTWKEGTGFVYDPNTLKKIGTFPYPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEY 182 (264)
T ss_dssp EESSSSEEEEEETTTTEEEEEEE-SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEE
T ss_pred EEecCCeEEEEccccceEEEEEecCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEE
Confidence 33456788899999988888887766555555 67777888765 68999999888777665432 11 222222
Q ss_pred EecCCCCEEEEecCCCeEEEEeCCCcceeeecc------------CC---CCCeeEEEEcCCCC-EEEEe
Q psy6442 130 LLNSERPIFVCGGEDLKMYKFDYSTGAEIESFK------------GH---FGPIHCVKFSPDGE-LYASG 183 (231)
Q Consensus 130 ~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~------------~h---~~~V~~v~~spd~~-~laS~ 183 (231)
-++.+.|--=..-.|...|..+|+....+. .+ .+-.+.+||.|... +++||
T Consensus 183 ---i~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG 249 (264)
T PF05096_consen 183 ---INGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG 249 (264)
T ss_dssp ---ETTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred ---EcCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence 144444444445566677777776443221 01 24578999998754 55655
No 341
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.33 E-value=0.016 Score=32.31 Aligned_cols=31 Identities=32% Similarity=0.674 Sum_probs=26.9
Q ss_pred CCeeEEEEcCCC---CEEEEeeCCCcEEEEeCCC
Q psy6442 166 GPIHCVKFSPDG---ELYASGSEDGTLRLWQTNV 196 (231)
Q Consensus 166 ~~V~~v~~spd~---~~laS~s~d~~v~iwd~~~ 196 (231)
++|++++|||.+ .+|+-+..-+.|.|+|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 468999999864 4899999999999999985
No 342
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=96.26 E-value=0.63 Score=40.82 Aligned_cols=150 Identities=11% Similarity=0.122 Sum_probs=89.6
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCceEEEEeCCc-----c----eeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccc
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAEVQKLEFGAV-----P----NSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPA 122 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~-----~----~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 122 (231)
+.+++.++.|+.+.-.|..+++.+-....... . ..+....++..++...++.+.-+|..+.+.+..+....
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~ 140 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTFDGRLVALDAETGKQVWKFGNND 140 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEecCCCeEEEEECCCCCEeeeecCCC
Confidence 56677888899999999999887765543221 0 01111111444444557788889999888887765543
Q ss_pred e------eEEEEEEecCCCCEEEEec---------CCCeEEEEeCCCcceeeeccCCCC--------------------C
Q psy6442 123 Q------VHSASLLLNSERPIFVCGG---------EDLKMYKFDYSTGAEIESFKGHFG--------------------P 167 (231)
Q Consensus 123 ~------~~~~~~~~~~~~~~~~~g~---------~d~~i~~~d~~~~~~~~~~~~h~~--------------------~ 167 (231)
. +.. ..... + ..++.++ .++.++.+|..+|+.+..++.... .
T Consensus 141 ~~~~~~~i~s-sP~v~-~-~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 217 (488)
T cd00216 141 QVPPGYTMTG-APTIV-K-KLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGT 217 (488)
T ss_pred CcCcceEecC-CCEEE-C-CEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCC
Confidence 2 111 00111 1 2333443 357889999999988776543211 1
Q ss_pred e-eEEEEcCCCCEEEEeeCCC------------------cEEEEeCCCCCeeeeee
Q psy6442 168 I-HCVKFSPDGELYASGSEDG------------------TLRLWQTNVGKTYGLWK 204 (231)
Q Consensus 168 V-~~v~~spd~~~laS~s~d~------------------~v~iwd~~~~~~~~~~~ 204 (231)
| .+.++.+.+.++..++.++ .|.-.|..+|+.....+
T Consensus 218 vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~ 273 (488)
T cd00216 218 SWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQ 273 (488)
T ss_pred ccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEee
Confidence 1 1345555556666666554 79999999999764433
No 343
>KOG4649|consensus
Probab=96.25 E-value=0.37 Score=38.20 Aligned_cols=99 Identities=21% Similarity=0.186 Sum_probs=71.0
Q ss_pred EcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCC
Q psy6442 99 THGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGE 178 (231)
Q Consensus 99 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~ 178 (231)
++.+.+.-.|..+++...+......+....+. -+.+++.|...+.++..+.++|+.+..+..-..-=......+++.
T Consensus 30 SHs~~~~avd~~sG~~~We~ilg~RiE~sa~v---vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~g 106 (354)
T KOG4649|consen 30 SHSGIVIAVDPQSGNLIWEAILGVRIECSAIV---VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGG 106 (354)
T ss_pred cCCceEEEecCCCCcEEeehhhCceeeeeeEE---ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCc
Confidence 45567777788888777766555544443332 245688999999999999999987776653222223345778899
Q ss_pred EEEEeeCCCcEEEEeCCCCCee
Q psy6442 179 LYASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 179 ~laS~s~d~~v~iwd~~~~~~~ 200 (231)
++-.++.|++...-|..+..-+
T Consensus 107 lIycgshd~~~yalD~~~~~cV 128 (354)
T KOG4649|consen 107 LIYCGSHDGNFYALDPKTYGCV 128 (354)
T ss_pred eEEEecCCCcEEEecccccceE
Confidence 9999999999999998876643
No 344
>KOG1832|consensus
Probab=96.23 E-value=0.0087 Score=54.47 Aligned_cols=160 Identities=16% Similarity=0.209 Sum_probs=102.1
Q ss_pred CCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCC
Q psy6442 15 GDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDG 93 (231)
Q Consensus 15 g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~ 93 (231)
-+..+++..|+....+++|+.+. ..|+.|+.-|.||++++.+|....... ++..++.+..+.+|
T Consensus 1091 Fr~w~~frd~~~~fTc~afs~~~---------------~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dg 1155 (1516)
T KOG1832|consen 1091 FRSWRSFRDETALFTCIAFSGGT---------------NHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDG 1155 (1516)
T ss_pred cccchhhhccccceeeEEeecCC---------------ceEEeeeccceEEEEEccCccccccccccccccccccccCCc
Confidence 35567788898888899998763 457888999999999999998776654 56788999999999
Q ss_pred CEEEEEcC--C-eEEEEECCCc-ceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeec-c---CCC
Q psy6442 94 TTITVTHG--S-CVTFLDANSL-ELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESF-K---GHF 165 (231)
Q Consensus 94 ~~~~~~~~--~-~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~-~---~h~ 165 (231)
...+.+.. . -..+|+.... .....++.. .+..+ +...+..+.|.......+||+.++..+.++ . +..
T Consensus 1156 s~~Ltsss~S~PlsaLW~~~s~~~~~Hsf~ed---~~vkF--sn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~ 1230 (1516)
T KOG1832|consen 1156 STQLTSSSSSSPLSALWDASSTGGPRHSFDED---KAVKF--SNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSS 1230 (1516)
T ss_pred ceeeeeccccCchHHHhccccccCcccccccc---ceeeh--hhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhh
Confidence 87665432 2 3467876542 222222221 22223 222333344444455678898887766553 2 222
Q ss_pred CCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCe
Q psy6442 166 GPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKT 199 (231)
Q Consensus 166 ~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~ 199 (231)
..-+.+.|||+..++. .|| -+||++..+-
T Consensus 1231 y~~n~a~FsP~D~LIl---ndG--vLWDvR~~~a 1259 (1516)
T KOG1832|consen 1231 YSNNLAHFSPCDTLIL---NDG--VLWDVRIPEA 1259 (1516)
T ss_pred hhccccccCCCcceEe---eCc--eeeeeccHHH
Confidence 2336778999877664 233 4688776543
No 345
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.22 E-value=0.22 Score=34.11 Aligned_cols=91 Identities=19% Similarity=0.182 Sum_probs=59.3
Q ss_pred CEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccceeEEEE-EEe
Q psy6442 53 TRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHSAS-LLL 131 (231)
Q Consensus 53 ~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~ 131 (231)
..|+.||.|..||+|+-. ..+..+.-...+.++...+.+++.+...+++|.+|+.. ..+.+.+....+.++. +..
T Consensus 16 ~eLlvGs~D~~IRvf~~~--e~~~Ei~e~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~~--~RlWRiKSK~~~~~~~~~D~ 91 (111)
T PF14783_consen 16 NELLVGSDDFEIRVFKGD--EIVAEITETDKVTSLCSLGGGRFAYALANGTVGVYDRS--QRLWRIKSKNQVTSMAFYDI 91 (111)
T ss_pred ceEEEecCCcEEEEEeCC--cEEEEEecccceEEEEEcCCCEEEEEecCCEEEEEeCc--ceeeeeccCCCeEEEEEEcC
Confidence 569999999999999754 55666666778888888888888888888999999753 2233333333332222 222
Q ss_pred cCCC-CEEEEecCCCeE
Q psy6442 132 NSER-PIFVCGGEDLKM 147 (231)
Q Consensus 132 ~~~~-~~~~~g~~d~~i 147 (231)
+.++ +.+++|=.+|.|
T Consensus 92 ~gdG~~eLI~GwsnGkv 108 (111)
T PF14783_consen 92 NGDGVPELIVGWSNGKV 108 (111)
T ss_pred CCCCceEEEEEecCCeE
Confidence 3222 246666666654
No 346
>KOG3621|consensus
Probab=96.11 E-value=0.047 Score=48.43 Aligned_cols=109 Identities=14% Similarity=0.163 Sum_probs=72.1
Q ss_pred EEccCCCEEEEEc-CCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcce-----eeec
Q psy6442 88 EISRDGTTITVTH-GSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAE-----IESF 161 (231)
Q Consensus 88 ~~~~~~~~~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~-----~~~~ 161 (231)
+++..+..++++. .+.+.+++.......................++...++|.|+..+.|-++.+..+.. +..+
T Consensus 40 c~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~ 119 (726)
T KOG3621|consen 40 CVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPC 119 (726)
T ss_pred EeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccc
Confidence 4445555665544 466777776544332222111122223344578888899999999999987755321 1122
Q ss_pred -cCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCC
Q psy6442 162 -KGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNV 196 (231)
Q Consensus 162 -~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~ 196 (231)
..|...|++++|++++..+.+|...|.|.+-.+.+
T Consensus 120 d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 120 DKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred cccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 24788999999999999999999999998887766
No 347
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.05 E-value=0.18 Score=34.54 Aligned_cols=55 Identities=11% Similarity=0.216 Sum_probs=42.2
Q ss_pred CEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 136 PIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 136 ~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
.-|+.|++|..|++|+-. +.+.++. -.+.|.++.-.+. ..|+.+-.+|+|-+|+-
T Consensus 16 ~eLlvGs~D~~IRvf~~~--e~~~Ei~-e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~ 70 (111)
T PF14783_consen 16 NELLVGSDDFEIRVFKGD--EIVAEIT-ETDKVTSLCSLGG-GRFAYALANGTVGVYDR 70 (111)
T ss_pred ceEEEecCCcEEEEEeCC--cEEEEEe-cccceEEEEEcCC-CEEEEEecCCEEEEEeC
Confidence 468899999999999743 5556655 3456777777776 56888999999988874
No 348
>KOG2395|consensus
Probab=95.84 E-value=0.24 Score=42.90 Aligned_cols=138 Identities=16% Similarity=0.182 Sum_probs=89.7
Q ss_pred EEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCE--------EEEEcCCeEEEEECCCcce-----EEeeec
Q psy6442 54 RLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTT--------ITVTHGSCVTFLDANSLEL-----IKEHKV 120 (231)
Q Consensus 54 ~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--------~~~~~~~~i~~~d~~~~~~-----~~~~~~ 120 (231)
.|.++..-..++-.|+..|+.+....+...++-+.+.|+... ++...++.+..||.+-... .+.+..
T Consensus 348 il~~~~~~~~l~klDIE~GKIVeEWk~~~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy 427 (644)
T KOG2395|consen 348 ILMDGGEQDKLYKLDIERGKIVEEWKFEDDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQY 427 (644)
T ss_pred EeeCCCCcCcceeeecccceeeeEeeccCCcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeecccc
Confidence 345566666788889999998888887776777777776542 2233456777888763221 111222
Q ss_pred cceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceee-eccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 121 PAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIE-SFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~-~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
..+....|+....+| .++.|+.+|.|++||- .+..-. -++|-..+|..|..+.||..++..+ +..+-|-++
T Consensus 428 ~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~t 499 (644)
T KOG2395|consen 428 STKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLIDT 499 (644)
T ss_pred ccccccceeeecCCc-eEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEEE
Confidence 222233333333344 5788999999999996 444333 3678889999999999998776544 455666664
No 349
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.73 E-value=0.84 Score=36.77 Aligned_cols=184 Identities=18% Similarity=0.270 Sum_probs=90.2
Q ss_pred eeeeccCCCeEeeeecccccEEE--EEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCC-ceEEEE-eCCc
Q psy6442 8 MLRQGDTGDWIGTFEGHKGCVWG--VDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASA-EVQKLE-FGAV 83 (231)
Q Consensus 8 ~~~~~~~g~~i~~l~gH~~~V~~--~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~-~~~~~~-~~~~ 83 (231)
+++|.++++.+.++...++.=+- =.|++||.+|.....|+.. .-|.|-|||.+.+- .+-.+. ++--
T Consensus 94 ~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~----------~rGViGvYd~r~~fqrvgE~~t~GiG 163 (366)
T COG3490 94 MVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDP----------NRGVIGVYDAREGFQRVGEFSTHGIG 163 (366)
T ss_pred EEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCC----------CCceEEEEecccccceecccccCCcC
Confidence 46666666666555433332110 1467777666554444421 13567799987431 111121 2345
Q ss_pred ceeEEEccCCCEEEEEcCC-------------------eEEEEECCCcceEEeeeccceeEEEE---EEecCCCCEEEEe
Q psy6442 84 PNSLEISRDGTTITVTHGS-------------------CVTFLDANSLELIKEHKVPAQVHSAS---LLLNSERPIFVCG 141 (231)
Q Consensus 84 ~~~v~~~~~~~~~~~~~~~-------------------~i~~~d~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g 141 (231)
+-.+.+.+||+++++.+++ .+.+.|..+.+.+.++..+......+ +...+++.+...+
T Consensus 164 pHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgc 243 (366)
T COG3490 164 PHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGC 243 (366)
T ss_pred cceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEE
Confidence 6788999999998876543 12334444555555555552221111 1123333322211
Q ss_pred cCCC-----eEEEEeCCCcceeeecc-------CCCCCeeEEEEcCCCCEEEEeeCCCc-EEEEeCCCCCeee
Q psy6442 142 GEDL-----KMYKFDYSTGAEIESFK-------GHFGPIHCVKFSPDGELYASGSEDGT-LRLWQTNVGKTYG 201 (231)
Q Consensus 142 ~~d~-----~i~~~d~~~~~~~~~~~-------~h~~~V~~v~~spd~~~laS~s~d~~-v~iwd~~~~~~~~ 201 (231)
-..+ --.+=....+++++-+. +-...|-+++.+.+..+++-.|.-|+ .-|||..+|....
T Consensus 244 Qy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~ 316 (366)
T COG3490 244 QYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVS 316 (366)
T ss_pred EeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEe
Confidence 1100 00000001111111111 12234667888877666666665554 5799999998764
No 350
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=95.57 E-value=0.2 Score=46.03 Aligned_cols=59 Identities=17% Similarity=0.293 Sum_probs=45.6
Q ss_pred CCCEEEEEeCCCCEEEEeCCCCCceEEE-EeCCcceeEEEccCCCEEEEEcCCeEEEEEC
Q psy6442 51 NNTRLISCAEDKTVRLWDVSASAEVQKL-EFGAVPNSLEISRDGTTITVTHGSCVTFLDA 109 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iwd~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~ 109 (231)
.+++||.||.+|.||+||--.......+ .++.++..+..+.||+.+++++...+.+++.
T Consensus 587 ~~G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~tyLlLi~t 646 (794)
T PF08553_consen 587 EDGYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCKTYLLLIDT 646 (794)
T ss_pred CCceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeecceEEEEEE
Confidence 5678999999999999994332222222 2467899999999999999999988888774
No 351
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=95.55 E-value=1.1 Score=36.64 Aligned_cols=177 Identities=14% Similarity=0.137 Sum_probs=104.6
Q ss_pred CCCceeeecc-CCCeEeeeecccccEEEEEECCCCceeEeccc--cccccCC-CEEEEEeCCCCEEEEeCCCCCceEEEE
Q psy6442 4 DGKPMLRQGD-TGDWIGTFEGHKGCVWGVDINKDASKAASGAA--DFQAKNN-TRLISCAEDKTVRLWDVSASAEVQKLE 79 (231)
Q Consensus 4 d~~~~~~~~~-~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~--d~~~~~~-~~l~s~s~D~ti~iwd~~~~~~~~~~~ 79 (231)
.|.|-+||.. +-+.+..|..|.--=+.+.+.|||..|+-+-. .-.+..+ ..|=-..++-++-.-|..+++.+....
T Consensus 76 ~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~ 155 (305)
T PF07433_consen 76 RGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVE 155 (305)
T ss_pred cEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeee
Confidence 3556677776 45566777766544466778888865554422 2222221 234444556677778888888877755
Q ss_pred eC-----CcceeEEEccCCCEEEEEcC-C-------eEEEEECCCcceEEeeecc------ceeEEEEEEecCCCCEEEE
Q psy6442 80 FG-----AVPNSLEISRDGTTITVTHG-S-------CVTFLDANSLELIKEHKVP------AQVHSASLLLNSERPIFVC 140 (231)
Q Consensus 80 ~~-----~~~~~v~~~~~~~~~~~~~~-~-------~i~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 140 (231)
+. -++..+++.+++..++.... + -+.+++... .+.....+ ..-..-++..++++..++.
T Consensus 156 Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~--~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~ 233 (305)
T PF07433_consen 156 LPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGG--ALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAV 233 (305)
T ss_pred cCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCC--cceeccCChHHHHhhCCceEEEEEeCCCCEEEE
Confidence 52 36888999999887765321 1 223333222 12222211 1122334445778877766
Q ss_pred ecCC-CeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeC
Q psy6442 141 GGED-LKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSE 185 (231)
Q Consensus 141 g~~d-~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~ 185 (231)
.+.. +++.+||..++..+.... -..+..++-.+++ +++|.+.
T Consensus 234 tsPrGg~~~~~d~~tg~~~~~~~--l~D~cGva~~~~~-f~~ssG~ 276 (305)
T PF07433_consen 234 TSPRGGRVAVWDAATGRLLGSVP--LPDACGVAPTDDG-FLVSSGQ 276 (305)
T ss_pred ECCCCCEEEEEECCCCCEeeccc--cCceeeeeecCCc-eEEeCCC
Confidence 6654 578899999998876643 2356777777777 5665554
No 352
>KOG4649|consensus
Probab=95.52 E-value=0.96 Score=35.96 Aligned_cols=109 Identities=15% Similarity=0.093 Sum_probs=69.4
Q ss_pred CEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccceeEEEEEEec
Q psy6442 53 TRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLN 132 (231)
Q Consensus 53 ~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 132 (231)
+.++.+|-.+.++--|..++...-...++..+.+-+.--.+..++....+.+.+.+..+++....+.....+.. ....+
T Consensus 24 T~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~vvgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~-~a~~d 102 (354)
T KOG4649|consen 24 TLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIVVGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKV-RAQCD 102 (354)
T ss_pred eEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEEECCEEEEEEccCcEEEEEecchhheeeeeehhhhcc-ceEEc
Confidence 45666777777777777777665544444444433333222233334567888888888877666544322221 11237
Q ss_pred CCCCEEEEecCCCeEEEEeCCCcceeeecc
Q psy6442 133 SERPIFVCGGEDLKMYKFDYSTGAEIESFK 162 (231)
Q Consensus 133 ~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~ 162 (231)
+++.++..|+.|++.+..|.++...+...+
T Consensus 103 ~~~glIycgshd~~~yalD~~~~~cVyksk 132 (354)
T KOG4649|consen 103 FDGGLIYCGSHDGNFYALDPKTYGCVYKSK 132 (354)
T ss_pred CCCceEEEecCCCcEEEecccccceEEecc
Confidence 788899999999999999998877766543
No 353
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=95.51 E-value=0.18 Score=37.64 Aligned_cols=40 Identities=25% Similarity=0.455 Sum_probs=31.8
Q ss_pred CCeeEEEEcCCC------CEEEEeeCCCcEEEEeCCCCCeeeeeecc
Q psy6442 166 GPIHCVKFSPDG------ELYASGSEDGTLRLWQTNVGKTYGLWKCI 206 (231)
Q Consensus 166 ~~V~~v~~spd~------~~laS~s~d~~v~iwd~~~~~~~~~~~~~ 206 (231)
..|.+++|||.| -+||....++.|.||...... ...|..+
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~~~-~~~W~~v 131 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPGNP-QGEWNRV 131 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCCCc-cccEeee
Confidence 378999999964 389999999999999987654 5566544
No 354
>KOG1645|consensus
Probab=95.38 E-value=0.096 Score=43.65 Aligned_cols=129 Identities=16% Similarity=0.127 Sum_probs=82.6
Q ss_pred ccccEEEEEECCCCceeEeccc-ccccc---CCCEEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCC--EE
Q psy6442 24 HKGCVWGVDINKDASKAASGAA-DFQAK---NNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGT--TI 96 (231)
Q Consensus 24 H~~~V~~~~~~~~~~~~~s~~~-d~~~~---~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~--~~ 96 (231)
|...-+++.+++....+..+.. +..+. .++.+..|- | +++.+..+.+....+. ....+.+++++|... ..
T Consensus 134 h~qk~f~v~r~~gcrli~y~~~~s~lv~sQks~qa~lpGv--G-v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~ 210 (463)
T KOG1645|consen 134 HKQKSFSVGRNAGCRLIGYDESSSTLVVSQKSGQALLPGV--G-VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLG 210 (463)
T ss_pred hcccceeeeecCCceEEecccccceeeeeccchhhcCCcc--c-eEEeccCCcchhhcccccchhhhhhccCccccceee
Confidence 5566667776665544433211 10000 111122221 2 6666666555544333 235688999999877 34
Q ss_pred EEEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcc
Q psy6442 97 TVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA 156 (231)
Q Consensus 97 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~ 156 (231)
..+.+..|.++|+.+..+...+..+..+.+++|..+ +...+..|...|.|++||++..+
T Consensus 211 ~asl~nkiki~dlet~~~vssy~a~~~~wSC~wDld-e~h~IYaGl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 211 LASLGNKIKIMDLETSCVVSSYIAYNQIWSCCWDLD-ERHVIYAGLQNGMVLVYDMRQPE 269 (463)
T ss_pred eeccCceEEEEecccceeeeheeccCCceeeeeccC-CcceeEEeccCceEEEEEccCCC
Confidence 456788999999999888888888777777777544 35567788889999999997654
No 355
>KOG2444|consensus
Probab=95.25 E-value=0.087 Score=40.68 Aligned_cols=140 Identities=13% Similarity=0.097 Sum_probs=75.3
Q ss_pred EEEEeCCCCEEEEeCCCCCceEEEEeCCccee-EEEccCCCEEEE-EcCCeEEEEECCCcceEEe-eeccceeEEEEEEe
Q psy6442 55 LISCAEDKTVRLWDVSASAEVQKLEFGAVPNS-LEISRDGTTITV-THGSCVTFLDANSLELIKE-HKVPAQVHSASLLL 131 (231)
Q Consensus 55 l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~ 131 (231)
|...|.|+.|+-++++.-+.- ......+.. .....-+..+++ +.++.+..|...-...... .........+.+..
T Consensus 33 l~~~sa~~~v~~~~~~k~k~s--~rse~~~~e~~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~ 110 (238)
T KOG2444|consen 33 LRATSADGLVRERKVRKHKES--CRSERFIDEGQRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPN 110 (238)
T ss_pred hccccCCcccccchhhhhhhh--hhhhhhhhcceeecccCceEEeecccceEEEecCCccchHHHhhhcccccceecccc
Confidence 344567888888877643211 010111111 111122233444 4567888777652211110 11111111111211
Q ss_pred cCCCCEEEEecCCCeEEEEeCCCcceeeeccCCC-CCeeEEEEcCCCCEEEEe--eCCCcEEEEeCCC
Q psy6442 132 NSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHF-GPIHCVKFSPDGELYASG--SEDGTLRLWQTNV 196 (231)
Q Consensus 132 ~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~-~~V~~v~~spd~~~laS~--s~d~~v~iwd~~~ 196 (231)
..++.+..++.++++|+.|+...++.+...-.|. .++..+..+..+++++++ |.|..++.|++..
T Consensus 111 ~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 111 GRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred ccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 2334467788999999999998877776666677 666666666666777777 7777777777643
No 356
>KOG3621|consensus
Probab=94.88 E-value=0.29 Score=43.67 Aligned_cols=95 Identities=15% Similarity=0.132 Sum_probs=58.8
Q ss_pred CcCCCceeeeccCCCe-EeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEE-
Q psy6442 2 CVDGKPMLRQGDTGDW-IGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE- 79 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~-i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~- 79 (231)
+.-|-|+|++-.+|+. +.+..+-.+.+.....+++. ..+|.++..|.|-++.+..+.....+.
T Consensus 52 sS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e---------------~lvAagt~~g~V~v~ql~~~~p~~~~~~ 116 (726)
T KOG3621|consen 52 SSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVE---------------YLVAAGTASGRVSVFQLNKELPRDLDYV 116 (726)
T ss_pred cccceEEEEecCchhhhcccccCccceEEEEEecchh---------------HhhhhhcCCceEEeehhhccCCCcceee
Confidence 3456777777666653 33333445555556666643 335566666777777765543221111
Q ss_pred ------eCCcceeEEEccCCCEEEEEcC-CeEEEEECCC
Q psy6442 80 ------FGAVPNSLEISRDGTTITVTHG-SCVTFLDANS 111 (231)
Q Consensus 80 ------~~~~~~~v~~~~~~~~~~~~~~-~~i~~~d~~~ 111 (231)
++..|++++|+++++.++.+++ |.+....+..
T Consensus 117 t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 117 TPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred ccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 2457899999999999998864 6676655544
No 357
>KOG2395|consensus
Probab=94.85 E-value=0.29 Score=42.50 Aligned_cols=58 Identities=17% Similarity=0.346 Sum_probs=45.7
Q ss_pred CCCEEEEEeCCCCEEEEeCCCCCceEE-EE-eCCcceeEEEccCCCEEEEEcCCeEEEEEC
Q psy6442 51 NNTRLISCAEDKTVRLWDVSASAEVQK-LE-FGAVPNSLEISRDGTTITVTHGSCVTFLDA 109 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iwd~~~~~~~~~-~~-~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~ 109 (231)
.+..++.||.+|.||+||- .+....+ ++ ++..+..+..+.+|..++++++..+.+.+.
T Consensus 440 ~sG~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~tyLlLi~t 499 (644)
T KOG2395|consen 440 ESGYIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATCKTYLLLIDT 499 (644)
T ss_pred CCceEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEecccEEEEEEE
Confidence 4578999999999999997 3333222 22 567899999999999999999988887764
No 358
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=94.81 E-value=1.9 Score=38.88 Aligned_cols=110 Identities=18% Similarity=0.166 Sum_probs=73.2
Q ss_pred cceeEEEccCCCEEEEEc-CCeEEEEECCCcceEEeeec--cceeEEEEEEecCCCCEEEEecCCCeEEEEeCCC-----
Q psy6442 83 VPNSLEISRDGTTITVTH-GSCVTFLDANSLELIKEHKV--PAQVHSASLLLNSERPIFVCGGEDLKMYKFDYST----- 154 (231)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~-~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~----- 154 (231)
.+.-+..+.-++..++.. ...+.+||........+... ..++..+.|...|+++.+++-+....|.++-...
T Consensus 31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~ 110 (631)
T PF12234_consen 31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTN 110 (631)
T ss_pred CcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhc
Confidence 344455555555555544 45899999987765444333 5567777888889999988888898888874421
Q ss_pred -c---ceeee--ccCCC-CCeeEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 155 -G---AEIES--FKGHF-GPIHCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 155 -~---~~~~~--~~~h~-~~V~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
+ ..+.. +..|+ .+|.+..|-++|.+++.++ +.+.|++-
T Consensus 111 ~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk 155 (631)
T PF12234_consen 111 KGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK 155 (631)
T ss_pred CCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence 1 12222 23444 5899999999997766543 55888874
No 359
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=94.81 E-value=0.17 Score=41.03 Aligned_cols=66 Identities=17% Similarity=0.352 Sum_probs=44.5
Q ss_pred EEecCCCCEEEEecCCCeEEEEeCCCcc---eeee-----ccCCCCCeeEEEEcCCC-CEEEEeeCCCcEEEEeCC
Q psy6442 129 LLLNSERPIFVCGGEDLKMYKFDYSTGA---EIES-----FKGHFGPIHCVKFSPDG-ELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 129 ~~~~~~~~~~~~g~~d~~i~~~d~~~~~---~~~~-----~~~h~~~V~~v~~spd~-~~laS~s~d~~v~iwd~~ 195 (231)
+.++.+...+++ .+|.+|-+|++.-.. .+-. ++.-+.-|++..|+|.. +.+.-.+..|+|+|-|++
T Consensus 178 iS~NsD~et~lS-aDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlR 252 (460)
T COG5170 178 ISFNSDKETLLS-ADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLR 252 (460)
T ss_pred eeecCchheeee-ccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhh
Confidence 344666666665 468899999875321 1212 22234568899999974 567777789999999987
No 360
>KOG2280|consensus
Probab=94.69 E-value=1.2 Score=40.37 Aligned_cols=181 Identities=11% Similarity=0.172 Sum_probs=90.0
Q ss_pred ceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceE-EE--E-eCC
Q psy6442 7 PMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQ-KL--E-FGA 82 (231)
Q Consensus 7 ~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~-~~--~-~~~ 82 (231)
+++++ .+|+++.++.-..+.+.++.|+.+ ..|+....||++.+|++....... .+ + ..+
T Consensus 66 I~If~-~sG~lL~~~~w~~~~lI~mgWs~~----------------eeLI~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~ 128 (829)
T KOG2280|consen 66 IRIFN-ISGQLLGRILWKHGELIGMGWSDD----------------EELICVQKDGTVHVYGLLGEFIESNSVGFESQMS 128 (829)
T ss_pred EEEEe-ccccchHHHHhcCCCeeeecccCC----------------ceEEEEeccceEEEeecchhhhcccccccccccC
Confidence 45566 457777775544457777888764 457788899999999985432211 12 1 122
Q ss_pred cceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeee-ccc-eeEEEEEEecCCCC--EEEEe-cCCCeEEEEeCCCc-c
Q psy6442 83 VPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHK-VPA-QVHSASLLLNSERP--IFVCG-GEDLKMYKFDYSTG-A 156 (231)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~--~~~~g-~~d~~i~~~d~~~~-~ 156 (231)
.+..+.+..+|-.+.. .++.+..........+++.+ .|. .....+|...+.+. .++.. ....-..++...+. .
T Consensus 129 ~I~ec~~f~~GVavlt-~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~~~~~q~~~~~~ 207 (829)
T KOG2280|consen 129 DIVECRFFHNGVAVLT-VSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVGLHICQVEESRV 207 (829)
T ss_pred ceeEEEEecCceEEEe-cCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhhhcccceecccc
Confidence 3444444445544333 33333332221111111111 111 01112232222211 11111 10000011111111 1
Q ss_pred eeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeec
Q psy6442 157 EIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKC 205 (231)
Q Consensus 157 ~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~ 205 (231)
..+.+..-...+..+..||+.++||--..+|.|.+-.....+....+++
T Consensus 208 q~~~~~~~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~ 256 (829)
T KOG2280|consen 208 QLHALSWPNSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNC 256 (829)
T ss_pred cccccCCCCceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCC
Confidence 1222322235678899999999999999999999888877766655543
No 361
>KOG2079|consensus
Probab=94.63 E-value=0.062 Score=50.01 Aligned_cols=69 Identities=22% Similarity=0.354 Sum_probs=52.0
Q ss_pred EEEEecCCCeEEEEeCCCcce-eeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeec
Q psy6442 137 IFVCGGEDLKMYKFDYSTGAE-IESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKC 205 (231)
Q Consensus 137 ~~~~g~~d~~i~~~d~~~~~~-~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~ 205 (231)
.++.|+..+.+..+|+...-. .+.=+.-.++|.+++|+.+|.+++.|-.+|.|.+||...+++.+..+.
T Consensus 101 ~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e 170 (1206)
T KOG2079|consen 101 PIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITE 170 (1206)
T ss_pred eEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeee
Confidence 366777778888777644211 122222357999999999999999999999999999999998766543
No 362
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=94.61 E-value=0.35 Score=40.47 Aligned_cols=101 Identities=20% Similarity=0.232 Sum_probs=55.8
Q ss_pred ccCCCEEEEE----------cCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceee
Q psy6442 90 SRDGTTITVT----------HGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIE 159 (231)
Q Consensus 90 ~~~~~~~~~~----------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~ 159 (231)
|||++.+++. ..+...++|+.+.+...............+ +|++..++... +..|++.+..++...+
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~~~~~~~~~~--sP~g~~~~~v~-~~nly~~~~~~~~~~~ 77 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPPPPKLQDAKW--SPDGKYIAFVR-DNNLYLRDLATGQETQ 77 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-EETTBSEEEE---SSSTEEEEEE-TTEEEEESSTTSEEEE
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCCcccccccee--ecCCCeeEEEe-cCceEEEECCCCCeEE
Confidence 4666665542 224567788887655443333223333334 78888888764 6789999887664432
Q ss_pred e-ccCC----------------CCCeeEEEEcCCCCEEEEeeC-CCcEEEEe
Q psy6442 160 S-FKGH----------------FGPIHCVKFSPDGELYASGSE-DGTLRLWQ 193 (231)
Q Consensus 160 ~-~~~h----------------~~~V~~v~~spd~~~laS~s~-d~~v~iwd 193 (231)
. ..|- -+.-..+.||||+++||.... +..|+.+.
T Consensus 78 lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~ 129 (353)
T PF00930_consen 78 LTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYP 129 (353)
T ss_dssp SES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEE
T ss_pred eccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEE
Confidence 1 2220 112356889999999887753 44455443
No 363
>KOG4640|consensus
Probab=94.59 E-value=0.26 Score=43.42 Aligned_cols=93 Identities=17% Similarity=0.128 Sum_probs=64.4
Q ss_pred CCcceeEEEccCCCEEEE-EcCCeEEEEECCCcceEEeeeccc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCccee
Q psy6442 81 GAVPNSLEISRDGTTITV-THGSCVTFLDANSLELIKEHKVPA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEI 158 (231)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~ 158 (231)
+..+.-+.|+|.-..++. ...+.+.+...+ .+.+.++..|. ++. .+..+.|+|.+++.|-.||+|++.|..++..+
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~-~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l 97 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVT-ASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRL 97 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccc-eeeeecCCCCEEEEEecCCeEEEEEccCCCce
Confidence 445677788887666554 456667766665 55566665443 343 34445999999999999999999999998877
Q ss_pred eecc-CCCCCeeEEEEcC
Q psy6442 159 ESFK-GHFGPIHCVKFSP 175 (231)
Q Consensus 159 ~~~~-~h~~~V~~v~~sp 175 (231)
+.+. .-..+|.++-|+|
T Consensus 98 ~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 98 VSFLFSVETDISKGIWDR 115 (665)
T ss_pred eccccccccchheeeccc
Confidence 6632 2345677777764
No 364
>KOG2114|consensus
Probab=94.51 E-value=3.9 Score=37.77 Aligned_cols=164 Identities=16% Similarity=0.158 Sum_probs=90.5
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCceEEEEe-CCc-ceeEEEccCCCEEE-EEcC----C-eEEEEECCC------cceEEe
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAEVQKLEF-GAV-PNSLEISRDGTTIT-VTHG----S-CVTFLDANS------LELIKE 117 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~~~~~~~-~~~-~~~v~~~~~~~~~~-~~~~----~-~i~~~d~~~------~~~~~~ 117 (231)
+..++-|+.||.|-+.+-+- +..+.++. +.. +..+........++ ++.+ . .+++|++.. ..++..
T Consensus 35 ~~~vvigt~~G~V~~Ln~s~-~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~ 113 (933)
T KOG2114|consen 35 TGSVVIGTADGRVVILNSSF-QLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYE 113 (933)
T ss_pred CceEEEeeccccEEEecccc-eeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCcceeee
Confidence 55689999999988886432 22122221 112 22332223323332 2222 1 688998653 233422
Q ss_pred ee-----cc---ceeEEEEEEecCCCCEEEEecCCCeEEEEeCC----CcceeeeccCCCCCeeEEEEcCCCCEEEEeeC
Q psy6442 118 HK-----VP---AQVHSASLLLNSERPIFVCGGEDLKMYKFDYS----TGAEIESFKGHFGPIHCVKFSPDGELYASGSE 185 (231)
Q Consensus 118 ~~-----~~---~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~----~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~ 185 (231)
++ .| .+...+ ..+.+-..+++|-.+|.|..+.-. .+........-..||+.+++..++..++-+..
T Consensus 114 ~ri~~~~np~~~~p~s~l--~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~T 191 (933)
T KOG2114|consen 114 HRIFTIKNPTNPSPASSL--AVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVAT 191 (933)
T ss_pred eeeeccCCCCCCCcceEE--EEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEe
Confidence 21 12 223333 335567788999999999887542 12222222224579999999999876333444
Q ss_pred CCcEEEEeCCCCCe--eeeeeccCCcccCCCCCCcc
Q psy6442 186 DGTLRLWQTNVGKT--YGLWKCIEGGLNNSLGLDSS 219 (231)
Q Consensus 186 d~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~ 219 (231)
...|.+|.+. |++ ..+.......+.|....+.+
T Consensus 192 t~~V~~y~l~-gr~p~~~~ld~~G~~lnCss~~~~t 226 (933)
T KOG2114|consen 192 TEQVMLYSLS-GRTPSLKVLDNNGISLNCSSFSDGT 226 (933)
T ss_pred cceeEEEEec-CCCcceeeeccCCccceeeecCCCC
Confidence 5669999987 554 44466555555555544443
No 365
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=94.14 E-value=2.4 Score=33.82 Aligned_cols=142 Identities=11% Similarity=0.204 Sum_probs=78.0
Q ss_pred EEEEeCCCCEEEEeCCCC-----CceEEEEeCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccc-------
Q psy6442 55 LISCAEDKTVRLWDVSAS-----AEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPA------- 122 (231)
Q Consensus 55 l~s~s~D~ti~iwd~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~------- 122 (231)
...+...++|.+|..... +..+.+..+..+..++|. +..++++..+...+.|..+...........
T Consensus 107 ~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~--~~~i~v~~~~~f~~idl~~~~~~~l~~~~~~~~~~~~ 184 (275)
T PF00780_consen 107 RLCVAVKKKILIYEWNDPRNSFSKLLKEISLPDPPSSIAFL--GNKICVGTSKGFYLIDLNTGSPSELLDPSDSSSSFKS 184 (275)
T ss_pred EEEEEECCEEEEEEEECCcccccceeEEEEcCCCcEEEEEe--CCEEEEEeCCceEEEecCCCCceEEeCccCCcchhhh
Confidence 334445668888776542 456677788899999999 456666656667777776544432221111
Q ss_pred ---eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceee--eccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCC
Q psy6442 123 ---QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIE--SFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 123 ---~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~--~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~ 197 (231)
.........-+++.++++- .+..++ .|. .|+..+ .++ ....+.++++.. .+|..... +.|.||++.++
T Consensus 185 ~~~~~~~~~~~~~~~~e~Ll~~-~~~g~f-v~~-~G~~~r~~~i~-W~~~p~~~~~~~--pyli~~~~-~~iEV~~~~~~ 257 (275)
T PF00780_consen 185 RNSSSKPLGIFQLSDNEFLLCY-DNIGVF-VNK-NGEPSRKSTIQ-WSSAPQSVAYSS--PYLIAFSS-NSIEVRSLETG 257 (275)
T ss_pred cccCCCceEEEEeCCceEEEEe-cceEEE-EcC-CCCcCcccEEE-cCCchhEEEEEC--CEEEEECC-CEEEEEECcCC
Confidence 0111111112334444442 222222 222 333222 222 334566666633 46766665 55999999999
Q ss_pred Ceeeeeec
Q psy6442 198 KTYGLWKC 205 (231)
Q Consensus 198 ~~~~~~~~ 205 (231)
+.+|....
T Consensus 258 ~lvQ~i~~ 265 (275)
T PF00780_consen 258 ELVQTIPL 265 (275)
T ss_pred cEEEEEEC
Confidence 98877653
No 366
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=94.07 E-value=2.5 Score=37.45 Aligned_cols=113 Identities=17% Similarity=0.279 Sum_probs=62.4
Q ss_pred CcceeEEEccCC-----CEEEEEcCCeEEEEECCCc-----ceE--E--eeeccceeEEEEEEecCCCCEEEE-ecCCCe
Q psy6442 82 AVPNSLEISRDG-----TTITVTHGSCVTFLDANSL-----ELI--K--EHKVPAQVHSASLLLNSERPIFVC-GGEDLK 146 (231)
Q Consensus 82 ~~~~~v~~~~~~-----~~~~~~~~~~i~~~d~~~~-----~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~-g~~d~~ 146 (231)
..+..++|.|-+ ..+++.+...+.+|.+... +.+ + ++..+.++..-.+.++|...+++. ...|..
T Consensus 57 EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvS 136 (671)
T PF15390_consen 57 EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVS 136 (671)
T ss_pred ceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCcee
Confidence 357788888753 3567788899999986521 111 1 122233322222234676665543 344544
Q ss_pred EE-EEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCC-CcEEEEeCC
Q psy6442 147 MY-KFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSED-GTLRLWQTN 195 (231)
Q Consensus 147 i~-~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d-~~v~iwd~~ 195 (231)
|. -....+......+. -.+-|+|.+|.+||+.|+.|-.. =.-.|||-.
T Consensus 137 V~~sV~~d~srVkaDi~-~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~ 186 (671)
T PF15390_consen 137 VLPSVHCDSSRVKADIK-TSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSA 186 (671)
T ss_pred EeeeeeeCCceEEEecc-CCceEEEEEecCcCCEEEEEeCCeEEEEEecCc
Confidence 32 12222222223343 45789999999999877666432 223689853
No 367
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=93.94 E-value=3.2 Score=34.47 Aligned_cols=154 Identities=19% Similarity=0.216 Sum_probs=87.5
Q ss_pred CCCEEEEEeCCCCEEEEeCC-CCCceEEE-E-eC---Ccc-eeEEEcc-CCCEEEEEcCCeEEEEECCCcceE--Eeeec
Q psy6442 51 NNTRLISCAEDKTVRLWDVS-ASAEVQKL-E-FG---AVP-NSLEISR-DGTTITVTHGSCVTFLDANSLELI--KEHKV 120 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iwd~~-~~~~~~~~-~-~~---~~~-~~v~~~~-~~~~~~~~~~~~i~~~d~~~~~~~--~~~~~ 120 (231)
.+..+.+-+.||++--..+. .|+...+. . +. .++ ..-++.. ++..++++..+.+.-.|....... .....
T Consensus 146 ~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~ 225 (342)
T PF06433_consen 146 GNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSL 225 (342)
T ss_dssp ETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEES
T ss_pred CCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccc
Confidence 34568888889999888876 44443222 1 11 112 2223333 345667788888888776554321 11111
Q ss_pred -----------cceeEEEEEEecC-CCCEEEEec-------CC--CeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCC-
Q psy6442 121 -----------PAQVHSASLLLNS-ERPIFVCGG-------ED--LKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGE- 178 (231)
Q Consensus 121 -----------~~~~~~~~~~~~~-~~~~~~~g~-------~d--~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~- 178 (231)
|.....+.+ ++ .+++.+.-. .+ ..||.+|+.+++.+..++. ..++.+|+.+.+..
T Consensus 226 ~t~~e~~~~WrPGG~Q~~A~--~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P 302 (342)
T PF06433_consen 226 LTDAEKADGWRPGGWQLIAY--HAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKP 302 (342)
T ss_dssp S-HHHHHTTEEE-SSS-EEE--ETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEE-EEEESEEEEESSSS-
T ss_pred cCccccccCcCCcceeeeee--ccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeC-CCccceEEEccCCCc
Confidence 111111222 32 233333211 11 3699999999999988763 24688999999865
Q ss_pred EEEE-eeCCCcEEEEeCCCCCeeeeeeccC
Q psy6442 179 LYAS-GSEDGTLRLWQTNVGKTYGLWKCIE 207 (231)
Q Consensus 179 ~laS-~s~d~~v~iwd~~~~~~~~~~~~~~ 207 (231)
+|.+ ...++.+.|||..+||.+...+.+.
T Consensus 303 ~L~~~~~~~~~l~v~D~~tGk~~~~~~~lG 332 (342)
T PF06433_consen 303 LLYALSAGDGTLDVYDAATGKLVRSIEQLG 332 (342)
T ss_dssp EEEEEETTTTEEEEEETTT--EEEEE---S
T ss_pred EEEEEcCCCCeEEEEeCcCCcEEeehhccC
Confidence 5544 4568999999999999987776543
No 368
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=93.93 E-value=3.4 Score=34.88 Aligned_cols=175 Identities=19% Similarity=0.217 Sum_probs=82.6
Q ss_pred eeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCE-EEEEeCCCC--EEEEeCCCCCceEEEEeC-Ccce
Q psy6442 10 RQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTR-LISCAEDKT--VRLWDVSASAEVQKLEFG-AVPN 85 (231)
Q Consensus 10 ~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~-l~s~s~D~t--i~iwd~~~~~~~~~~~~~-~~~~ 85 (231)
-|..||--+-.|..+.+.-..+-|...+- ..++.+ |..+..|+. +.+.|+.+++..+..... ....
T Consensus 15 ~D~~TG~~VtrLT~~~~~~h~~YF~~~~f----------t~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~ 84 (386)
T PF14583_consen 15 IDPDTGHRVTRLTPPDGHSHRLYFYQNCF----------TDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTF 84 (386)
T ss_dssp E-TTT--EEEE-S-TTS-EE---TTS--B-----------TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TT
T ss_pred eCCCCCceEEEecCCCCcccceeecCCCc----------CCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCcc
Confidence 35567776666765544434343322110 112333 445555654 555688887766555543 2344
Q ss_pred eEEEccCCCEE-EEEcCCeEEEEECCCcceEEeeeccceeE-EEEEEecCCCCEEEEe----------------------
Q psy6442 86 SLEISRDGTTI-TVTHGSCVTFLDANSLELIKEHKVPAQVH-SASLLLNSERPIFVCG---------------------- 141 (231)
Q Consensus 86 ~v~~~~~~~~~-~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g---------------------- 141 (231)
...++|+++.+ ++..+..+...|+.+.+....+..+.... ...+..+.++..++..
T Consensus 85 g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a 164 (386)
T PF14583_consen 85 GGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEA 164 (386)
T ss_dssp T-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC
T ss_pred ceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhh
Confidence 66778888876 45666788889999887766666654333 2344446666654321
Q ss_pred cCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeC----CC-cEEEEeCC
Q psy6442 142 GEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSE----DG-TLRLWQTN 195 (231)
Q Consensus 142 ~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~----d~-~v~iwd~~ 195 (231)
....+|...|+.+|+....+. -..-+..+.|||...-+++-+. +. .-|||-+.
T Consensus 165 ~p~~~i~~idl~tG~~~~v~~-~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~ 222 (386)
T PF14583_consen 165 RPHCRIFTIDLKTGERKVVFE-DTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTIN 222 (386)
T ss_dssp ---EEEEEEETTT--EEEEEE-ESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEE
T ss_pred CCCceEEEEECCCCceeEEEe-cCccccCcccCCCCCCEEEEeccCCcceeceEEEEEE
Confidence 012456667887776543333 3345677899997655555542 33 24778653
No 369
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=93.40 E-value=3.8 Score=33.68 Aligned_cols=183 Identities=18% Similarity=0.236 Sum_probs=90.5
Q ss_pred CCceeeeccCC-----C--eEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCC-ceE
Q psy6442 5 GKPMLRQGDTG-----D--WIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASA-EVQ 76 (231)
Q Consensus 5 ~~~~~~~~~~g-----~--~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~-~~~ 76 (231)
|.+++++.... + +++. ....++|.++.-- +.+|+.+ ..+.|.+|++...+ ...
T Consensus 62 Gri~v~~i~~~~~~~~~l~~i~~-~~~~g~V~ai~~~-----------------~~~lv~~-~g~~l~v~~l~~~~~l~~ 122 (321)
T PF03178_consen 62 GRILVFEISESPENNFKLKLIHS-TEVKGPVTAICSF-----------------NGRLVVA-VGNKLYVYDLDNSKTLLK 122 (321)
T ss_dssp EEEEEEEECSS-----EEEEEEE-EEESS-EEEEEEE-----------------TTEEEEE-ETTEEEEEEEETTSSEEE
T ss_pred cEEEEEEEEcccccceEEEEEEE-EeecCcceEhhhh-----------------CCEEEEe-ecCEEEEEEccCcccchh
Confidence 66777777663 2 2222 3457788887533 2233333 35889999998877 444
Q ss_pred EEEeCCcceeEEEccCCCEEEEEc-CCeEEE--EECCCcceEEeee--ccceeEEEEEEecCCCCEEEEecCCCeEEEEe
Q psy6442 77 KLEFGAVPNSLEISRDGTTITVTH-GSCVTF--LDANSLELIKEHK--VPAQVHSASLLLNSERPIFVCGGEDLKMYKFD 151 (231)
Q Consensus 77 ~~~~~~~~~~v~~~~~~~~~~~~~-~~~i~~--~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d 151 (231)
.-.+......++...-+..+++++ ...+.+ |+..........+ .+..+.++.+..+. ..++.+..++.++++.
T Consensus 123 ~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~--~~~i~~D~~gnl~~l~ 200 (321)
T PF03178_consen 123 KAFYDSPFYITSLSVFKNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDE--DTIIVGDKDGNLFVLR 200 (321)
T ss_dssp EEEE-BSSSEEEEEEETTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SS--SEEEEEETTSEEEEEE
T ss_pred hheecceEEEEEEeccccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCC--cEEEEEcCCCeEEEEE
Confidence 433444334444444455776664 344444 5653333322222 23344444443233 4788889999988876
Q ss_pred CCC-------cc-eee-eccC-CCCCeeEE---EEcCC--C------CEEEEeeCCCcEE-EEeCCCCCeeeeeeccCC
Q psy6442 152 YST-------GA-EIE-SFKG-HFGPIHCV---KFSPD--G------ELYASGSEDGTLR-LWQTNVGKTYGLWKCIEG 208 (231)
Q Consensus 152 ~~~-------~~-~~~-~~~~-h~~~V~~v---~~spd--~------~~laS~s~d~~v~-iwd~~~~~~~~~~~~~~~ 208 (231)
... +. .+. ...- ....|+++ ++.|. + ..++-++.+|.|- |--+-..+.+..++.++.
T Consensus 201 ~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l~p~l~~~~~~~L~~lQ~ 279 (321)
T PF03178_consen 201 YNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVLIPFLSEEEYRFLQALQN 279 (321)
T ss_dssp E-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEEEE-E-HHHHHHHHHHHH
T ss_pred ECCCCcccccccccceeEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEEEecCCHHHHHHHHHHHH
Confidence 542 11 221 1111 23567777 55552 2 2477788889887 433234443333333333
No 370
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=93.24 E-value=4 Score=33.52 Aligned_cols=165 Identities=15% Similarity=0.177 Sum_probs=83.9
Q ss_pred EEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeec---c---ceeEEE
Q psy6442 54 RLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKV---P---AQVHSA 127 (231)
Q Consensus 54 ~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~---~---~~~~~~ 127 (231)
.+.+--..+.|.-|+..+++. ..+..+..+.+......+..++++.. .+.+++......+..+.. . ...+..
T Consensus 39 L~w~DI~~~~i~r~~~~~g~~-~~~~~p~~~~~~~~~d~~g~Lv~~~~-g~~~~~~~~~~~~t~~~~~~~~~~~~r~ND~ 116 (307)
T COG3386 39 LLWVDILGGRIHRLDPETGKK-RVFPSPGGFSSGALIDAGGRLIACEH-GVRLLDPDTGGKITLLAEPEDGLPLNRPNDG 116 (307)
T ss_pred EEEEeCCCCeEEEecCCcCce-EEEECCCCcccceeecCCCeEEEEcc-ccEEEeccCCceeEEeccccCCCCcCCCCce
Confidence 345555567777788775543 33444444444443333333333322 233444333332121111 1 111122
Q ss_pred EEEecCCCCEEEEecC-----------CCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEE-EEeeCCCcEEEEeCC
Q psy6442 128 SLLLNSERPIFVCGGE-----------DLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELY-ASGSEDGTLRLWQTN 195 (231)
Q Consensus 128 ~~~~~~~~~~~~~g~~-----------d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~l-aS~s~d~~v~iwd~~ 195 (231)
. ..+++.+.+.... .+.++.++. .+..+..+..|-..-+.|+||||++.| .+=+..+.|.-|++.
T Consensus 117 ~--v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d 193 (307)
T COG3386 117 V--VDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLD 193 (307)
T ss_pred e--EcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecC
Confidence 2 2556665443322 245667765 455555566666677899999999654 444566778777664
Q ss_pred --CCCeee----eeeccCCcccCCCCCCcccccc
Q psy6442 196 --VGKTYG----LWKCIEGGLNNSLGLDSSGHLN 223 (231)
Q Consensus 196 --~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 223 (231)
.+.... ..-...++.+=-+.+|.+|+.|
T Consensus 194 ~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw 227 (307)
T COG3386 194 PATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLW 227 (307)
T ss_pred cccCccCCcceEEEccCCCCCCCceEEeCCCCEE
Confidence 233221 1122245655566667777777
No 371
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=93.14 E-value=0.49 Score=27.06 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=25.6
Q ss_pred ccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcc
Q psy6442 120 VPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA 156 (231)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~ 156 (231)
.+.++....+ +|...++|.+..++.|.++.+ +++
T Consensus 10 l~~~v~~~~w--~P~mdLiA~~t~~g~v~v~Rl-~~q 43 (47)
T PF12894_consen 10 LPSRVSCMSW--CPTMDLIALGTEDGEVLVYRL-NWQ 43 (47)
T ss_pred CCCcEEEEEE--CCCCCEEEEEECCCeEEEEEC-CCc
Confidence 3444554444 899999999999999999987 444
No 372
>KOG1897|consensus
Probab=92.95 E-value=5.1 Score=37.71 Aligned_cols=156 Identities=15% Similarity=0.150 Sum_probs=97.7
Q ss_pred EEEEeCCCCCceEEEEeCC-----cceeEEEccC-CCEEEEE-----------cCCeEEEEECCC---cceEEeeeccce
Q psy6442 64 VRLWDVSASAEVQKLEFGA-----VPNSLEISRD-GTTITVT-----------HGSCVTFLDANS---LELIKEHKVPAQ 123 (231)
Q Consensus 64 i~iwd~~~~~~~~~~~~~~-----~~~~v~~~~~-~~~~~~~-----------~~~~i~~~d~~~---~~~~~~~~~~~~ 123 (231)
++++|-.+.+.+...++.. .+.++.+..| +..++++ ..|.|.++.... .+.+++......
T Consensus 752 l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Ga 831 (1096)
T KOG1897|consen 752 LRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGA 831 (1096)
T ss_pred EEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccc
Confidence 6677766665555444432 3455557666 3444432 124555554333 223333333333
Q ss_pred eEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCC--CCCeee
Q psy6442 124 VHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN--VGKTYG 201 (231)
Q Consensus 124 ~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~--~~~~~~ 201 (231)
+.++. --+++++|.- ...+++|++.+.+.++.-..|..++..+.+.-.|..++.|.--+++.+-..+ .|....
T Consensus 832 v~aL~---~fngkllA~I--n~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~e 906 (1096)
T KOG1897|consen 832 VYALV---EFNGKLLAGI--NQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFEE 906 (1096)
T ss_pred eeehh---hhCCeEEEec--CcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceEE
Confidence 33322 2355555544 4556666666666777767888999999999999999999999988876554 455777
Q ss_pred eeeccCCcccCCCCCCccccccc
Q psy6442 202 LWKCIEGGLNNSLGLDSSGHLNN 224 (231)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~ 224 (231)
.-+..++.|-.++.+-.+..+++
T Consensus 907 vArD~~p~Wmtaveil~~d~ylg 929 (1096)
T KOG1897|consen 907 VARDYNPNWMTAVEILDDDTYLG 929 (1096)
T ss_pred eehhhCccceeeEEEecCceEEe
Confidence 78888999888887777665543
No 373
>PHA02713 hypothetical protein; Provisional
Probab=92.89 E-value=2 Score=38.42 Aligned_cols=73 Identities=12% Similarity=0.226 Sum_probs=44.0
Q ss_pred CCCEEEEecCC------CeEEEEeCCC-c--ceeeeccCCCCCeeEEEEcCCCCEEEEeeCCC--cEEEEeCCCCCeeee
Q psy6442 134 ERPIFVCGGED------LKMYKFDYST-G--AEIESFKGHFGPIHCVKFSPDGELYASGSEDG--TLRLWQTNVGKTYGL 202 (231)
Q Consensus 134 ~~~~~~~g~~d------~~i~~~d~~~-~--~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~--~v~iwd~~~~~~~~~ 202 (231)
++.+.+.|+.+ ..+..||..+ . ..+..++........+.+ ++.+.+.|+.|+ ++-.||..+. .
T Consensus 463 ~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~----~ 536 (557)
T PHA02713 463 KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTFNVYTY----E 536 (557)
T ss_pred CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE--CCEEEEEeeecceeehhhcCcccc----c
Confidence 45566666643 2467888876 3 233444433322222233 678899999888 6777887664 6
Q ss_pred eeccCCcccC
Q psy6442 203 WKCIEGGLNN 212 (231)
Q Consensus 203 ~~~~~~~~~~ 212 (231)
|+.+.+.-+|
T Consensus 537 W~~~~~~~~~ 546 (557)
T PHA02713 537 WNHICHQHSN 546 (557)
T ss_pred ccchhhhcCC
Confidence 8776666544
No 374
>PRK13616 lipoprotein LpqB; Provisional
Probab=92.56 E-value=7.7 Score=35.02 Aligned_cols=110 Identities=15% Similarity=0.192 Sum_probs=55.4
Q ss_pred CCcceeEEEccCCCEEEEE-cCCeE-EEEECCCcceEEee---------eccceeEEEEEEecCCCCEEEEecCCCeEEE
Q psy6442 81 GAVPNSLEISRDGTTITVT-HGSCV-TFLDANSLELIKEH---------KVPAQVHSASLLLNSERPIFVCGGEDLKMYK 149 (231)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~~-~~~~i-~~~d~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~ 149 (231)
......-.|+|++..+... ..+.+ ++.+......+... ..+..+..+. +++++..++.-. ++++++
T Consensus 396 g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~~~~g~Issl~--wSpDG~RiA~i~-~g~v~V 472 (591)
T PRK13616 396 GHSLTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVASRVPGPISELQ--LSRDGVRAAMII-GGKVYL 472 (591)
T ss_pred CCCCCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhhccCCCcCeEE--ECCCCCEEEEEE-CCEEEE
Confidence 3345666899997755433 22222 22222111111111 1122344444 488888777654 457766
Q ss_pred ---EeCCCcc-ee---eec-cCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 150 ---FDYSTGA-EI---ESF-KGHFGPIHCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 150 ---~d~~~~~-~~---~~~-~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
-....|. .+ ..+ .+-...+.++.|.+++.++ .+..++...+|.+
T Consensus 473 a~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v 524 (591)
T PRK13616 473 AVVEQTEDGQYALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYV 524 (591)
T ss_pred EEEEeCCCCceeecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEE
Confidence 4433443 11 112 2233446889999999865 4444555556654
No 375
>KOG1008|consensus
Probab=92.49 E-value=0.051 Score=47.87 Aligned_cols=137 Identities=15% Similarity=0.211 Sum_probs=85.6
Q ss_pred CEEEEEeCCCCEEEEeCCCCCce-EEE--EeCCcceeEEEccCCC-EEEEE-----cCCeEEEEECCCc--ceEEee---
Q psy6442 53 TRLISCAEDKTVRLWDVSASAEV-QKL--EFGAVPNSLEISRDGT-TITVT-----HGSCVTFLDANSL--ELIKEH--- 118 (231)
Q Consensus 53 ~~l~s~s~D~ti~iwd~~~~~~~-~~~--~~~~~~~~v~~~~~~~-~~~~~-----~~~~i~~~d~~~~--~~~~~~--- 118 (231)
-.++.|..+|.|-+-.++...-. ..+ .+..+.++++|.+-+. .++++ .+..+.+||..+. .+....
T Consensus 71 cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs 150 (783)
T KOG1008|consen 71 CILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFS 150 (783)
T ss_pred hhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccc
Confidence 34778888899988877654332 111 1234567888887543 44444 2458899998764 111111
Q ss_pred e-ccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcC-CCCEEEEeeCCCcEEEEe
Q psy6442 119 K-VPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSP-DGELYASGSEDGTLRLWQ 193 (231)
Q Consensus 119 ~-~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~sp-d~~~laS~s~d~~v~iwd 193 (231)
. .......+++ ..+.+++++|.....+.++|++..... ...-.+..+..+...| .+.++++-. |+.|.+||
T Consensus 151 ~~~l~gqns~cw--lrd~klvlaGm~sr~~~ifdlRqs~~~-~~svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD 223 (783)
T KOG1008|consen 151 SSTLDGQNSVCW--LRDTKLVLAGMTSRSVHIFDLRQSLDS-VSSVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWD 223 (783)
T ss_pred cccccCcccccc--ccCcchhhcccccchhhhhhhhhhhhh-hhhhhhhhcccceecCCCCCceeccc-cCceeecc
Confidence 1 1112234444 478888999999999999998732211 1111233455677888 778998877 89999999
No 376
>KOG3617|consensus
Probab=92.28 E-value=5.7 Score=37.00 Aligned_cols=29 Identities=17% Similarity=0.440 Sum_probs=26.1
Q ss_pred CCCeeEEEEcCCCCEEEEeeCCCcEEEEe
Q psy6442 165 FGPIHCVKFSPDGELYASGSEDGTLRLWQ 193 (231)
Q Consensus 165 ~~~V~~v~~spd~~~laS~s~d~~v~iwd 193 (231)
...+++++++..+..|+.+...|.+.+|-
T Consensus 303 ge~~~c~cY~~~~~~l~agt~~gnv~~w~ 331 (1416)
T KOG3617|consen 303 GEGILCMCYGEKEIRLWAGTKEGNVTIWL 331 (1416)
T ss_pred CCceEEEEEeccceEEEecccCCcEEEee
Confidence 34689999999999999999999999995
No 377
>KOG4499|consensus
Probab=92.09 E-value=2.6 Score=33.15 Aligned_cols=101 Identities=17% Similarity=0.187 Sum_probs=63.6
Q ss_pred cceeEEEccCCCEEEEEcC--CeEEEEE--CCCcceEEe---eec-------cceeEEEEEEecCCCCEEEEecCCCeEE
Q psy6442 83 VPNSLEISRDGTTITVTHG--SCVTFLD--ANSLELIKE---HKV-------PAQVHSASLLLNSERPIFVCGGEDLKMY 148 (231)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~~--~~i~~~d--~~~~~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~~g~~d~~i~ 148 (231)
..+.++|+.+.+.++.... -.+.-|| ..++....+ ++. +......++ +.++.+.++.-..++|.
T Consensus 159 IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~I--D~eG~L~Va~~ng~~V~ 236 (310)
T KOG4499|consen 159 ISNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTI--DTEGNLYVATFNGGTVQ 236 (310)
T ss_pred CCccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceE--ccCCcEEEEEecCcEEE
Confidence 4567788888887766443 2343355 333322111 111 011111222 56777777777788999
Q ss_pred EEeCCCcceeeeccCCCCCeeEEEEcCC--CCEEEEeeC
Q psy6442 149 KFDYSTGAEIESFKGHFGPIHCVKFSPD--GELYASGSE 185 (231)
Q Consensus 149 ~~d~~~~~~~~~~~~h~~~V~~v~~spd--~~~laS~s~ 185 (231)
.+|..+|+++.++.-.+..|+|++|--. .-+.+++..
T Consensus 237 ~~dp~tGK~L~eiklPt~qitsccFgGkn~d~~yvT~aa 275 (310)
T KOG4499|consen 237 KVDPTTGKILLEIKLPTPQITSCCFGGKNLDILYVTTAA 275 (310)
T ss_pred EECCCCCcEEEEEEcCCCceEEEEecCCCccEEEEEehh
Confidence 9999999999988777889999999765 345555553
No 378
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=92.02 E-value=7 Score=33.30 Aligned_cols=190 Identities=15% Similarity=0.069 Sum_probs=91.7
Q ss_pred CcCCCceeeeccCCCeEeee-ecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEe
Q psy6442 2 CVDGKPMLRQGDTGDWIGTF-EGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEF 80 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l-~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~ 80 (231)
+...++++.+..+|+.+..- ..-.. ..+.|.++++.+.....+...+.. ..+....|+.|.+.+......+-+
T Consensus 147 ~e~~~l~v~Dl~tg~~l~d~i~~~~~--~~~~W~~d~~~~~y~~~~~~~~~~----~~~~~~~v~~~~~gt~~~~d~lvf 220 (414)
T PF02897_consen 147 SEWYTLRVFDLETGKFLPDGIENPKF--SSVSWSDDGKGFFYTRFDEDQRTS----DSGYPRQVYRHKLGTPQSEDELVF 220 (414)
T ss_dssp SSEEEEEEEETTTTEEEEEEEEEEES--EEEEECTTSSEEEEEECSTTTSS-----CCGCCEEEEEEETTS-GGG-EEEE
T ss_pred CceEEEEEEECCCCcCcCCccccccc--ceEEEeCCCCEEEEEEeCcccccc----cCCCCcEEEEEECCCChHhCeeEE
Confidence 34456888888888776532 22111 238899887765544332211100 222244588888887655433322
Q ss_pred --CC--c-ceeEEEccCCCEEEEE--c--C-CeEEEEECCCc----ceEEeeeccceeEEEEEEecCCCCEEEEec---C
Q psy6442 81 --GA--V-PNSLEISRDGTTITVT--H--G-SCVTFLDANSL----ELIKEHKVPAQVHSASLLLNSERPIFVCGG---E 143 (231)
Q Consensus 81 --~~--~-~~~v~~~~~~~~~~~~--~--~-~~i~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~ 143 (231)
.. . ...+..++|++.+++. . . ..+.+.+.... ...+............+... .+.+.+... .
T Consensus 221 e~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~~-~~~~yi~Tn~~a~ 299 (414)
T PF02897_consen 221 EEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVDHH-GDRLYILTNDDAP 299 (414)
T ss_dssp C-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEEEE-TTEEEEEE-TT-T
T ss_pred eecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEEcc-CCEEEEeeCCCCC
Confidence 22 2 4578889999987753 1 2 35677777653 22222222221111112112 333333332 3
Q ss_pred CCeEEEEeCCCcce---eeeccCCCCCeeEEEEcCCC-CEEEEeeCCCc--EEEEeCCCCC
Q psy6442 144 DLKMYKFDYSTGAE---IESFKGHFGPIHCVKFSPDG-ELYASGSEDGT--LRLWQTNVGK 198 (231)
Q Consensus 144 d~~i~~~d~~~~~~---~~~~~~h~~~V~~v~~spd~-~~laS~s~d~~--v~iwd~~~~~ 198 (231)
.+.|...++..... ...+..|...+.-..+...+ .++++.-.++. |+++++..++
T Consensus 300 ~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~ 360 (414)
T PF02897_consen 300 NGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDGK 360 (414)
T ss_dssp T-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-TE
T ss_pred CcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCCc
Confidence 46777777765542 22444455533333333433 34555555554 6788988333
No 379
>KOG1008|consensus
Probab=91.98 E-value=0.15 Score=45.05 Aligned_cols=133 Identities=17% Similarity=0.254 Sum_probs=73.1
Q ss_pred CCCCEEEEeCCCCC--ceEEEEe----CCcceeEEEccCCCEEEEEcC-CeEEEEECCCc-ceEEeeeccceeEEEEEEe
Q psy6442 60 EDKTVRLWDVSASA--EVQKLEF----GAVPNSLEISRDGTTITVTHG-SCVTFLDANSL-ELIKEHKVPAQVHSASLLL 131 (231)
Q Consensus 60 ~D~ti~iwd~~~~~--~~~~~~~----~~~~~~v~~~~~~~~~~~~~~-~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~ 131 (231)
.|..++|||+.++- +..+..+ .....+++|..+.+.+.++.. ..++++|.+.. .....+... -+....+
T Consensus 127 nds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svnTk-~vqG~tV-- 203 (783)
T KOG1008|consen 127 NDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVNTK-YVQGITV-- 203 (783)
T ss_pred ccCCccceecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhhhhh-hccccee--
Confidence 36679999998762 2111111 223457888877777766654 47778876521 111111110 0111222
Q ss_pred cCCCCEEEEecCCCeEEEEeC-CCc-ceeeeccCCC----CCeeEEEEcCCC-CEEEEeeC-CCcEEEEeCC
Q psy6442 132 NSERPIFVCGGEDLKMYKFDY-STG-AEIESFKGHF----GPIHCVKFSPDG-ELYASGSE-DGTLRLWQTN 195 (231)
Q Consensus 132 ~~~~~~~~~g~~d~~i~~~d~-~~~-~~~~~~~~h~----~~V~~v~~spd~-~~laS~s~-d~~v~iwd~~ 195 (231)
+|-..--.+...|+.|-+||. ..- .++..+...+ ..+..++|.|.. .++++.+. .++|+++++.
T Consensus 204 dp~~~nY~cs~~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 204 DPFSPNYFCSNSDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred cCCCCCceeccccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 442222334455999999994 222 1222222222 248999999964 36777775 4668999974
No 380
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=91.94 E-value=7.2 Score=33.24 Aligned_cols=112 Identities=17% Similarity=0.178 Sum_probs=60.1
Q ss_pred EEEECCCCceeEeccccccccCCCEEEEEeCCC----CEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEE-c----
Q psy6442 30 GVDINKDASKAASGAADFQAKNNTRLISCAEDK----TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-H---- 100 (231)
Q Consensus 30 ~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~----ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~---- 100 (231)
.+.++|++++++ ++.+..| ++++.|+.+++.+...-.......+.|.+++..++.. .
T Consensus 128 ~~~~Spdg~~la--------------~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~ 193 (414)
T PF02897_consen 128 GFSVSPDGKRLA--------------YSLSDGGSEWYTLRVFDLETGKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQ 193 (414)
T ss_dssp EEEETTTSSEEE--------------EEEEETTSSEEEEEEEETTTTEEEEEEEEEEESEEEEECTTSSEEEEEECSTTT
T ss_pred eeeECCCCCEEE--------------EEecCCCCceEEEEEEECCCCcCcCCcccccccceEEEeCCCCEEEEEEeCccc
Confidence 456777776653 3434444 4999999999765432112222349999998876543 2
Q ss_pred -------CCeEEEEECCCcce--EEeeeccceeE-EEEEEecCCCCEEEEe---cCC-CeEEEEeCCCc
Q psy6442 101 -------GSCVTFLDANSLEL--IKEHKVPAQVH-SASLLLNSERPIFVCG---GED-LKMYKFDYSTG 155 (231)
Q Consensus 101 -------~~~i~~~d~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~g---~~d-~~i~~~d~~~~ 155 (231)
...+..+.+.+... ...+..+.... ...+..+++++.++.. +.+ ..+++.++..+
T Consensus 194 ~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~ 262 (414)
T PF02897_consen 194 RTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDG 262 (414)
T ss_dssp SS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCT
T ss_pred ccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEecccc
Confidence 22356666654332 12232222111 2334446777765532 223 45888888764
No 381
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=91.59 E-value=0.59 Score=37.30 Aligned_cols=46 Identities=11% Similarity=0.288 Sum_probs=35.7
Q ss_pred ccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcc
Q psy6442 24 HKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVP 84 (231)
Q Consensus 24 H~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~ 84 (231)
-.+.|+.|..+|+| +.||+...+|.|-+|++.+-+..+......+|
T Consensus 228 ~~d~i~kmSlSPdg---------------~~La~ih~sG~lsLW~iPsL~~~~~W~~~eqP 273 (282)
T PF15492_consen 228 EQDGIFKMSLSPDG---------------SLLACIHFSGSLSLWEIPSLRLQRSWKQDEQP 273 (282)
T ss_pred CCCceEEEEECCCC---------------CEEEEEEcCCeEEEEecCcchhhcccchhhCC
Confidence 46789999999985 45899999999999999877666655544433
No 382
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=91.06 E-value=13 Score=34.65 Aligned_cols=61 Identities=20% Similarity=0.278 Sum_probs=39.8
Q ss_pred CCeEEEEeCCCcceeeeccC-C---------CCCeeEEEEcC-CCC---EEEEeeCCCcEEEEeCCCCCeeeeeec
Q psy6442 144 DLKMYKFDYSTGAEIESFKG-H---------FGPIHCVKFSP-DGE---LYASGSEDGTLRLWQTNVGKTYGLWKC 205 (231)
Q Consensus 144 d~~i~~~d~~~~~~~~~~~~-h---------~~~V~~v~~sp-d~~---~laS~s~d~~v~iwd~~~~~~~~~~~~ 205 (231)
...|.-.|.++|+....++. | ..++ -+.+.. +|+ .++.++++|.+.+.|.++|+.....++
T Consensus 413 ~~slvALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~-L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~~e 487 (764)
T TIGR03074 413 SSSLVALDATTGKERWVFQTVHHDLWDMDVPAQPS-LVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPVEE 487 (764)
T ss_pred cceEEEEeCCCCceEEEecccCCccccccccCCce-EEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeecee
Confidence 34566667777776655432 2 1122 123333 553 789999999999999999998765554
No 383
>KOG2079|consensus
Probab=90.68 E-value=0.92 Score=42.69 Aligned_cols=71 Identities=15% Similarity=0.302 Sum_probs=53.3
Q ss_pred cceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEE---EEcCCCCEEEEeeCCCcEEEEeCC
Q psy6442 121 PAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCV---KFSPDGELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v---~~spd~~~laS~s~d~~v~iwd~~ 195 (231)
..++.+.++ +.++.+++.|-.+|.|.+||...++.++.+.-|..|...+ .+..++..+.++..-|. +|...
T Consensus 130 ~~~Vtsvaf--n~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~lv 203 (1206)
T KOG2079|consen 130 QGPVTSVAF--NQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKLV 203 (1206)
T ss_pred CCcceeeEe--cCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc--eEEEE
Confidence 445655555 8899999999999999999999988888887777665544 45556667777777775 66653
No 384
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=90.41 E-value=1.8 Score=23.42 Aligned_cols=35 Identities=14% Similarity=0.347 Sum_probs=25.9
Q ss_pred EEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEE
Q psy6442 55 LISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEI 89 (231)
Q Consensus 55 l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~ 89 (231)
+++.-.+++|.++|..+++.+..+..+..+..+++
T Consensus 7 yv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~ 41 (42)
T TIGR02276 7 YVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAV 41 (42)
T ss_pred EEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEe
Confidence 34455578999999988888888777666666654
No 385
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=90.19 E-value=4.5 Score=34.74 Aligned_cols=99 Identities=12% Similarity=0.107 Sum_probs=52.8
Q ss_pred cCCeEEEEECCCcceEEeeeccc---eeEEEEEEecCCCCEEE-EecCCCeEEEEeC-CCcc----eeeec---------
Q psy6442 100 HGSCVTFLDANSLELIKEHKVPA---QVHSASLLLNSERPIFV-CGGEDLKMYKFDY-STGA----EIESF--------- 161 (231)
Q Consensus 100 ~~~~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~g~~d~~i~~~d~-~~~~----~~~~~--------- 161 (231)
.+.++++||....+.+++++.+. -...+.++.+|+...-. .+.-..+|+.|-- ..++ .+-++
T Consensus 220 yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~ 299 (461)
T PF05694_consen 220 YGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWI 299 (461)
T ss_dssp S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS-
T ss_pred ccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCccc
Confidence 35689999999999999988752 23456666677766533 3334566776643 2221 11111
Q ss_pred --------cCCCCCeeEEEEcCCCCEE-EEeeCCCcEEEEeCCCCC
Q psy6442 162 --------KGHFGPIHCVKFSPDGELY-ASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 162 --------~~h~~~V~~v~~spd~~~l-aS~s~d~~v~iwd~~~~~ 198 (231)
..-..-|+++.+|.|+++| +|+=.+|.||-||+....
T Consensus 300 lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~ 345 (461)
T PF05694_consen 300 LPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPF 345 (461)
T ss_dssp --GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTT
T ss_pred ccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCC
Confidence 1113457999999999866 556689999999987643
No 386
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=90.16 E-value=1.8 Score=38.45 Aligned_cols=37 Identities=24% Similarity=0.392 Sum_probs=28.1
Q ss_pred CCeeEEEEcC----CCCEEEEeeCCCcEEEEeCCCCCeeee
Q psy6442 166 GPIHCVKFSP----DGELYASGSEDGTLRLWQTNVGKTYGL 202 (231)
Q Consensus 166 ~~V~~v~~sp----d~~~laS~s~d~~v~iwd~~~~~~~~~ 202 (231)
..+.++++++ +..+|++-+.|+++|+||+.+++....
T Consensus 215 ~~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~ 255 (547)
T PF11715_consen 215 SVAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLAT 255 (547)
T ss_dssp --EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEE
T ss_pred CccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEE
Confidence 3466677777 678999999999999999999998544
No 387
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=89.94 E-value=8.5 Score=30.60 Aligned_cols=167 Identities=9% Similarity=0.122 Sum_probs=88.0
Q ss_pred eeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCC--cceeEEEccCCCEEE
Q psy6442 20 TFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGA--VPNSLEISRDGTTIT 97 (231)
Q Consensus 20 ~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~ 97 (231)
.+.+-...+..+.|+|+.+.| ++.....+.|...+. .++.++.+.+.. .+..+++..++.+++
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tL--------------faV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl 80 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTL--------------FAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVL 80 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEE--------------EEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEE
T ss_pred ECCCccCCccccEEcCCCCeE--------------EEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEE
Confidence 455656679999999975433 556666777777786 477888887753 567888888887776
Q ss_pred EEc-CCeEEEEECCCc--c----eEEeeecc------ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCC---ccee--e
Q psy6442 98 VTH-GSCVTFLDANSL--E----LIKEHKVP------AQVHSASLLLNSERPIFVCGGEDLKMYKFDYST---GAEI--E 159 (231)
Q Consensus 98 ~~~-~~~i~~~d~~~~--~----~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~---~~~~--~ 159 (231)
... .+.+.+++.... . ....+... .....+++ ++.+..+..+-+.....++.... ...+ .
T Consensus 81 ~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~--D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~ 158 (248)
T PF06977_consen 81 SEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAY--DPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVS 158 (248)
T ss_dssp EETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEE--ETTTTEEEEEEESSSEEEEEEESTT-SS--EEE
T ss_pred EEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEE--cCCCCEEEEEeCCCChhhEEEccccCccceeec
Confidence 664 466766665221 1 11222221 12333444 66655555555554444443322 1111 1
Q ss_pred e------ccCCCCCeeEEEEcCC-CCEEEEeeCCCcEEEEeCCCCCeeeeee
Q psy6442 160 S------FKGHFGPIHCVKFSPD-GELYASGSEDGTLRLWQTNVGKTYGLWK 204 (231)
Q Consensus 160 ~------~~~h~~~V~~v~~spd-~~~laS~s~d~~v~iwd~~~~~~~~~~~ 204 (231)
. .......+.+++++|. +++++-..+.+.|-+.| ..|++...+.
T Consensus 159 ~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~ 209 (248)
T PF06977_consen 159 DDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLS 209 (248)
T ss_dssp E-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE
T ss_pred cccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEE
Confidence 1 1123456789999996 56777788888899999 6788765443
No 388
>PRK13616 lipoprotein LpqB; Provisional
Probab=89.39 E-value=16 Score=33.03 Aligned_cols=167 Identities=16% Similarity=0.174 Sum_probs=82.1
Q ss_pred EEEEEECCCCceeEeccccccccCCCEE---EEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcCCeE
Q psy6442 28 VWGVDINKDASKAASGAADFQAKNNTRL---ISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCV 104 (231)
Q Consensus 28 V~~~~~~~~~~~~~s~~~d~~~~~~~~l---~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i 104 (231)
...-.|+|+|..+.+.. ++..+ ......+.+.+.++..+.... .++..+..+.|+|||..+++..++.+
T Consensus 399 ~t~PsWspDG~~lw~v~------dg~~~~~v~~~~~~gql~~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~~g~v 470 (591)
T PRK13616 399 LTRPSWSLDADAVWVVV------DGNTVVRVIRDPATGQLARTPVDASAVAS--RVPGPISELQLSRDGVRAAMIIGGKV 470 (591)
T ss_pred CCCceECCCCCceEEEe------cCcceEEEeccCCCceEEEEeccCchhhh--ccCCCcCeEEECCCCCEEEEEECCEE
Confidence 56677888876655432 12111 112223445545665554433 45567999999999998776555666
Q ss_pred EE---EECCCcc-eE-Ee--eeccceeEEEEEEecCCCCEEEEe-cCCCeEEEEeCCCcceeeeccC--CCCCeeEEEEc
Q psy6442 105 TF---LDANSLE-LI-KE--HKVPAQVHSASLLLNSERPIFVCG-GEDLKMYKFDYSTGAEIESFKG--HFGPIHCVKFS 174 (231)
Q Consensus 105 ~~---~d~~~~~-~~-~~--~~~~~~~~~~~~~~~~~~~~~~~g-~~d~~i~~~d~~~~~~~~~~~~--h~~~V~~v~~s 174 (231)
.+ .....+. .+ .. ...........+.+.+++.+++.. +.+..++..++. |.....+.+ ...++.+|+=+
T Consensus 471 ~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~V~~~~~~~~v~~v~vD-G~~~~~~~~~n~~~~v~~vaa~ 549 (591)
T PRK13616 471 YLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDWRTGDSLVVGRSDPEHPVWYVNLD-GSNSDALPSRNLSAPVVAVAAS 549 (591)
T ss_pred EEEEEEeCCCCceeecccEEeecccCCccccceEecCCEEEEEecCCCCceEEEecC-CccccccCCCCccCceEEEecC
Confidence 55 3323332 11 00 111111111223335566554332 223446555554 222222233 36778888888
Q ss_pred CCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccC
Q psy6442 175 PDGELYASGSEDGTLRLWQTNVGKTYGLWKCIE 207 (231)
Q Consensus 175 pd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~ 207 (231)
|+ .++ ....++.+.+= .+...-.-|+++.
T Consensus 550 ~~-~iy-v~~~~g~~~l~--~~~~~~~~W~ev~ 578 (591)
T PRK13616 550 PS-TVY-VTDARAVLQLP--NSDSGDQYWREVP 578 (591)
T ss_pred Cc-eEE-EEcCCceEEec--CCCCCCCCceECc
Confidence 74 333 34445533333 2333334577655
No 389
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=89.26 E-value=13 Score=31.87 Aligned_cols=53 Identities=4% Similarity=0.090 Sum_probs=30.9
Q ss_pred eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCC-CCCeeEEEEcCCC
Q psy6442 123 QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGH-FGPIHCVKFSPDG 177 (231)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h-~~~V~~v~~spd~ 177 (231)
++..++ .+|+++.+|.-..++.+++....-.+.+..+.-. ..+...+.|.-++
T Consensus 218 ~i~~ia--vSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~d 271 (410)
T PF04841_consen 218 PIIKIA--VSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGND 271 (410)
T ss_pred CeEEEE--ECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCC
Confidence 344444 4888888888888888888765444444333222 2344555555544
No 390
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=89.12 E-value=12 Score=33.00 Aligned_cols=137 Identities=12% Similarity=0.085 Sum_probs=74.4
Q ss_pred EEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCC--------EEEEEcCCeEEEEECCCcc-eEEe---eeccc
Q psy6442 55 LISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGT--------TITVTHGSCVTFLDANSLE-LIKE---HKVPA 122 (231)
Q Consensus 55 l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~--------~~~~~~~~~i~~~d~~~~~-~~~~---~~~~~ 122 (231)
+..++.-..+.-.|+..|+.+........+ -|.+.|... .++...+..+...|.+-.. .+.. .....
T Consensus 483 ~~dg~~~~kLykmDIErGkvveeW~~~ddv-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~esKdY~t 561 (776)
T COG5167 483 YLDGGERDKLYKMDIERGKVVEEWDLKDDV-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVESKDYKT 561 (776)
T ss_pred EecCCCcccceeeecccceeeeEeecCCcc-eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeeeehhccc
Confidence 334455555666677777777666555544 555555432 2222233344445544221 1111 11111
Q ss_pred eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 123 QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
+....+. .....-.++.++..|-|++||--.-..-.-+++-..+|-.+..+.+|.++++.+. ..+-+-|+
T Consensus 562 Kn~Fss~-~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk-~yllL~d~ 631 (776)
T COG5167 562 KNKFSSG-MTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCK-NYLLLTDV 631 (776)
T ss_pred ccccccc-ccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeec-ceEEEEec
Confidence 1111111 1234456889999999999985222222235667778999999999987665553 45666665
No 391
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=89.05 E-value=6.2 Score=30.71 Aligned_cols=74 Identities=11% Similarity=0.242 Sum_probs=52.8
Q ss_pred cCCCCEEEEecCCCeEEEEeCCCcceeee-------cc-------CCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCC
Q psy6442 132 NSERPIFVCGGEDLKMYKFDYSTGAEIES-------FK-------GHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 132 ~~~~~~~~~g~~d~~i~~~d~~~~~~~~~-------~~-------~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~ 197 (231)
...+..+.+-..+|.+++||+.+++.+.. +. .....|..+.++.+|.-+++-+ +|....|+..-
T Consensus 19 ~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L- 96 (219)
T PF07569_consen 19 ECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL- 96 (219)
T ss_pred EeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc-
Confidence 34566677778999999999988764322 22 3556789999999998887776 47789999654
Q ss_pred CeeeeeeccCCcc
Q psy6442 198 KTYGLWKCIEGGL 210 (231)
Q Consensus 198 ~~~~~~~~~~~~~ 210 (231)
..|..+...+
T Consensus 97 ---~~W~~vsd~w 106 (219)
T PF07569_consen 97 ---GCWIRVSDSW 106 (219)
T ss_pred ---ceeEEeccch
Confidence 3565555553
No 392
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=88.84 E-value=9.1 Score=35.42 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=28.5
Q ss_pred CCCCeeEEEEcCC---CCEEEEeeCCCcEEEEeCCCCC
Q psy6442 164 HFGPIHCVKFSPD---GELYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 164 h~~~V~~v~~spd---~~~laS~s~d~~v~iwd~~~~~ 198 (231)
+...|..+.|+|. +..|+.=..|+++|+||+...+
T Consensus 145 ~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 145 SSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDPQ 182 (717)
T ss_pred CCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCCC
Confidence 4567889999996 4788888889999999997544
No 393
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=88.80 E-value=19 Score=33.61 Aligned_cols=69 Identities=22% Similarity=0.370 Sum_probs=44.8
Q ss_pred CEEEEecCCCeEEEEeCCCcceeeeccCCCCCee-------------EEEEcC--CCCEEEEee----------CCCcEE
Q psy6442 136 PIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIH-------------CVKFSP--DGELYASGS----------EDGTLR 190 (231)
Q Consensus 136 ~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~-------------~v~~sp--d~~~laS~s----------~d~~v~ 190 (231)
..++.+..|+++.-.|.++|+.+..|. ..+.|. .+.-+| .+..++.++ .+|.|+
T Consensus 261 ~rV~~~T~Dg~LiALDA~TGk~~W~fg-~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~ 339 (764)
T TIGR03074 261 RRIILPTSDARLIALDADTGKLCEDFG-NNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIR 339 (764)
T ss_pred CEEEEecCCCeEEEEECCCCCEEEEec-CCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEE
Confidence 356778889999999999999887653 222221 111222 133444453 268899
Q ss_pred EEeCCCCCeeeeeec
Q psy6442 191 LWQTNVGKTYGLWKC 205 (231)
Q Consensus 191 iwd~~~~~~~~~~~~ 205 (231)
-+|+++|+....|..
T Consensus 340 A~Da~TGkl~W~~~~ 354 (764)
T TIGR03074 340 AFDVNTGALVWAWDP 354 (764)
T ss_pred EEECCCCcEeeEEec
Confidence 999999998777664
No 394
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=88.41 E-value=18 Score=32.26 Aligned_cols=152 Identities=15% Similarity=0.155 Sum_probs=85.3
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcc--eeEEEcc---CCCEEEEE-c------CCeEEEEECCCcceEEeee
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAEVQKLEFGAVP--NSLEISR---DGTTITVT-H------GSCVTFLDANSLELIKEHK 119 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~--~~v~~~~---~~~~~~~~-~------~~~i~~~d~~~~~~~~~~~ 119 (231)
+.+++.++.|+.+.-.|..+++.+-........ ..+.-+| ++. +++. . ++.+.-+|..+++.+..+.
T Consensus 120 ~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g~-Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~ 198 (527)
T TIGR03075 120 DGKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKGK-VITGISGGEFGVRGYVTAYDAKTGKLVWRRY 198 (527)
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEECCE-EEEeecccccCCCcEEEEEECCCCceeEecc
Confidence 456777888999999999999887655432110 0111111 233 3332 1 3567778887777665433
Q ss_pred c-ccee---------------------------EE---EEEEecCCCCEEEEecC-----C-----------CeEEEEeC
Q psy6442 120 V-PAQV---------------------------HS---ASLLLNSERPIFVCGGE-----D-----------LKMYKFDY 152 (231)
Q Consensus 120 ~-~~~~---------------------------~~---~~~~~~~~~~~~~~g~~-----d-----------~~i~~~d~ 152 (231)
. +... .. .....++...++..+.. . ..|.-.|.
T Consensus 199 ~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~ 278 (527)
T TIGR03075 199 TVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDP 278 (527)
T ss_pred CcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEcc
Confidence 2 1100 00 00122444444433321 1 15667788
Q ss_pred CCcceeeeccCCCCCe---------eEEEEcCCCC---EEEEeeCCCcEEEEeCCCCCeeeeee
Q psy6442 153 STGAEIESFKGHFGPI---------HCVKFSPDGE---LYASGSEDGTLRLWQTNVGKTYGLWK 204 (231)
Q Consensus 153 ~~~~~~~~~~~h~~~V---------~~v~~spd~~---~laS~s~d~~v~iwd~~~~~~~~~~~ 204 (231)
++|+....|+.....+ .-+.+..+|+ .++.+.++|.+.+.|-.+||.+..|+
T Consensus 279 ~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~ 342 (527)
T TIGR03075 279 DTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEP 342 (527)
T ss_pred ccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceecccc
Confidence 8888876554321111 1233334665 78899999999999999999864443
No 395
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=88.22 E-value=11 Score=29.85 Aligned_cols=107 Identities=16% Similarity=0.171 Sum_probs=54.4
Q ss_pred cceeEEEccCCCEEEEEc--CC--eEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEE-eCCCcce
Q psy6442 83 VPNSLEISRDGTTITVTH--GS--CVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKF-DYSTGAE 157 (231)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~--~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~-d~~~~~~ 157 (231)
.+.+.++++++..+++.. ++ .+...... ..............-++ ++++.+.+....+...+++ +..++..
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~--~~~~~~~~g~~l~~PS~--d~~g~~W~v~~~~~~~~~~~~~~~g~~ 100 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAG--GPVRPVLTGGSLTRPSW--DPDGWVWTVDDGSGGVRVVRDSASGTG 100 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCC--CcceeeccCCccccccc--cCCCCEEEEEcCCCceEEEEecCCCcc
Confidence 567888999998665432 33 34443322 22211111112222233 5666666665545444444 2223321
Q ss_pred e-eec--cCCCCCeeEEEEcCCCCEEEEee---CCCcEEEEe
Q psy6442 158 I-ESF--KGHFGPIHCVKFSPDGELYASGS---EDGTLRLWQ 193 (231)
Q Consensus 158 ~-~~~--~~h~~~V~~v~~spd~~~laS~s---~d~~v~iwd 193 (231)
. ... ..-.+.|.++++||||..+|--. .++.|.|=-
T Consensus 101 ~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~ 142 (253)
T PF10647_consen 101 EPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAG 142 (253)
T ss_pred eeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEE
Confidence 1 111 11122899999999998776655 346665554
No 396
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=87.83 E-value=1.1 Score=38.40 Aligned_cols=59 Identities=19% Similarity=0.236 Sum_probs=49.4
Q ss_pred CCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCcccc
Q psy6442 163 GHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGH 221 (231)
Q Consensus 163 ~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (231)
.....+.++..+|.+++.|....=|.|.|+|+.++..+-.|+++-++-|..+-....++
T Consensus 305 D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~ 363 (415)
T PF14655_consen 305 DSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGD 363 (415)
T ss_pred cCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccc
Confidence 34455788999999998888888899999999999999999999998887776665544
No 397
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=87.45 E-value=3.2 Score=32.29 Aligned_cols=58 Identities=10% Similarity=0.159 Sum_probs=35.8
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCceEEE-E--------------eCCcceeEEEccCCCEEEEEcCCeEEEEEC
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAEVQKL-E--------------FGAVPNSLEISRDGTTITVTHGSCVTFLDA 109 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~~~~~-~--------------~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~ 109 (231)
+..|.....+|.+++||+..++++..- . ....+..+.++.+|..++.-.++....|+.
T Consensus 22 ~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsng~~y~y~~ 94 (219)
T PF07569_consen 22 GSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSNGDSYSYSP 94 (219)
T ss_pred CCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeCCCEEEecc
Confidence 456777788999999999988664322 1 113445666666666555444444455543
No 398
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=87.19 E-value=2.3 Score=22.94 Aligned_cols=31 Identities=29% Similarity=0.451 Sum_probs=23.6
Q ss_pred CCCC-EEEEeeCCCcEEEEeCCCCCeeeeeec
Q psy6442 175 PDGE-LYASGSEDGTLRLWQTNVGKTYGLWKC 205 (231)
Q Consensus 175 pd~~-~laS~s~d~~v~iwd~~~~~~~~~~~~ 205 (231)
|+++ ++++.-.+++|.++|..+++.......
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 5666 455566789999999999888776654
No 399
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=87.03 E-value=16 Score=30.06 Aligned_cols=152 Identities=17% Similarity=0.253 Sum_probs=87.7
Q ss_pred CEEEEEeCCCCEEEEeCCCCCc---eEEEEe-----CCcceeEEEccC--CCEEEEE--cCCeEEEEECCCcceEE--ee
Q psy6442 53 TRLISCAEDKTVRLWDVSASAE---VQKLEF-----GAVPNSLEISRD--GTTITVT--HGSCVTFLDANSLELIK--EH 118 (231)
Q Consensus 53 ~~l~s~s~D~ti~iwd~~~~~~---~~~~~~-----~~~~~~v~~~~~--~~~~~~~--~~~~i~~~d~~~~~~~~--~~ 118 (231)
..++.+++||||-=|...-... ...+.. ......+++... +..|++. ..++|.++|..-..... .+
T Consensus 101 a~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F 180 (336)
T TIGR03118 101 SRFLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSF 180 (336)
T ss_pred eeEEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCc
Confidence 4578899999999998643322 111222 123456666643 5567765 35788888865433211 01
Q ss_pred ec---cc---eeEEEEE---------EecCCCCEEEEecCCCeEEEEeCCCcceeeecc--CCCCCeeEEEEcCC-----
Q psy6442 119 KV---PA---QVHSASL---------LLNSERPIFVCGGEDLKMYKFDYSTGAEIESFK--GHFGPIHCVKFSPD----- 176 (231)
Q Consensus 119 ~~---~~---~~~~~~~---------~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~--~h~~~V~~v~~spd----- 176 (231)
.. |. +.....+ .-+++...=+.|-.-+.|-+||+ .+.+++++. +.-...+.|+..|-
T Consensus 181 ~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~-~G~l~~r~as~g~LNaPWG~a~APa~FG~~ 259 (336)
T TIGR03118 181 IDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTL-NGQLLRRVASSGRLNAPWGLAIAPESFGSL 259 (336)
T ss_pred cCCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcC-CCcEEEEeccCCcccCCceeeeChhhhCCC
Confidence 11 11 1111000 00111111223333467888887 567777663 33456678998773
Q ss_pred -CCEEEEeeCCCcEEEEeCCCCCeeeeeec
Q psy6442 177 -GELYASGSEDGTLRLWQTNVGKTYGLWKC 205 (231)
Q Consensus 177 -~~~laS~s~d~~v~iwd~~~~~~~~~~~~ 205 (231)
+.+|+--=.||+|..||..+|+.+..++.
T Consensus 260 sg~lLVGNFGDG~InaFD~~sG~~~g~L~~ 289 (336)
T TIGR03118 260 SGALLVGNFGDGTINAYDPQSGAQLGQLLD 289 (336)
T ss_pred CCCeEEeecCCceeEEecCCCCceeeeecC
Confidence 56787777899999999999987765554
No 400
>KOG1898|consensus
Probab=87.01 E-value=30 Score=33.25 Aligned_cols=145 Identities=11% Similarity=0.091 Sum_probs=72.6
Q ss_pred ceeeeccCCCeEeeeecccc----cEEEEEECCCCce-eEeccccccccCCCEEEEEeCCCCEEEEeCCC-CCceEEEEe
Q psy6442 7 PMLRQGDTGDWIGTFEGHKG----CVWGVDINKDASK-AASGAADFQAKNNTRLISCAEDKTVRLWDVSA-SAEVQKLEF 80 (231)
Q Consensus 7 ~~~~~~~~g~~i~~l~gH~~----~V~~~~~~~~~~~-~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~-~~~~~~~~~ 80 (231)
+++.|..+|+.++.+.-.++ .|..+.|+..... +...+.+.+-+-+...+ .+|.+..|++.. ++.+..++.
T Consensus 855 I~~~d~~s~~~~~~~~l~~ne~a~~v~~~~fs~~~~~~~~~v~~~~~~~l~~~~~---~~g~~ytyk~~~~g~~lellh~ 931 (1205)
T KOG1898|consen 855 IRVFDPKSGKIICLVELGQNEAAFSVCAVDFSSSEYQPFVAVGVATTEQLDSKSI---SSGFVYTYKFVRNGDKLELLHK 931 (1205)
T ss_pred EEEEcCCCCceEEEEeecCCcchhheeeeeeccCCCceEEEEEeecccccccccc---CCCceEEEEEEecCceeeeeec
Confidence 56777777776665442222 3555566544322 22222222211111112 345566665432 332323322
Q ss_pred CC-cceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccc-eeEEEEEEecCCCCEEEEecCCC--eEEEEeCCCcc
Q psy6442 81 GA-VPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPA-QVHSASLLLNSERPIFVCGGEDL--KMYKFDYSTGA 156 (231)
Q Consensus 81 ~~-~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~--~i~~~d~~~~~ 156 (231)
.. +-.-.++.|-+..++++-++.++++|....+.++..+... +.....+ -..+..++.|...- ....|+....+
T Consensus 932 T~~~~~v~Ai~~f~~~~LagvG~~l~~YdlG~K~lLRk~e~k~~p~~Is~i--qt~~~RI~VgD~qeSV~~~~y~~~~n~ 1009 (1205)
T KOG1898|consen 932 TEIPGPVGAICPFQGRVLAGVGRFLRLYDLGKKKLLRKCELKFIPNRISSI--QTYGARIVVGDIQESVHFVRYRREDNQ 1009 (1205)
T ss_pred cCCCccceEEeccCCEEEEecccEEEEeeCChHHHHhhhhhccCceEEEEE--eecceEEEEeeccceEEEEEEecCCCe
Confidence 11 2234566777778888889999999998888777665543 2222222 22344455554432 34455554444
No 401
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=86.74 E-value=13 Score=28.83 Aligned_cols=57 Identities=11% Similarity=0.275 Sum_probs=34.0
Q ss_pred eCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcC-CeEEEEECCCcceEEe
Q psy6442 59 AEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHG-SCVTFLDANSLELIKE 117 (231)
Q Consensus 59 s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~i~~~d~~~~~~~~~ 117 (231)
=.||...++|..+.+++..+..+..-. ....|+..+.++.+ ..+.+.|..+...+.+
T Consensus 108 w~egvaf~~d~~t~~~lg~~~y~GeGW--gLt~d~~~LimsdGsatL~frdP~tfa~~~~ 165 (262)
T COG3823 108 WKEGVAFKYDADTLEELGRFSYEGEGW--GLTSDDKNLIMSDGSATLQFRDPKTFAELDT 165 (262)
T ss_pred eccceeEEEChHHhhhhcccccCCcce--eeecCCcceEeeCCceEEEecCHHHhhhcce
Confidence 346677778887777766655544333 33456666766655 4666667665544433
No 402
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.65 E-value=16 Score=29.79 Aligned_cols=116 Identities=10% Similarity=0.164 Sum_probs=69.2
Q ss_pred CcceeEEEccCCCEEEEEcCCeEEEEE-CCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcce---
Q psy6442 82 AVPNSLEISRDGTTITVTHGSCVTFLD-ANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAE--- 157 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~~~i~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~--- 157 (231)
..+.++.|+|+.+.+++..+.--.+.. ...+..++++....--....+..-.+++++++--.+.+++++.+.....
T Consensus 86 ~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~~~~ 165 (316)
T COG3204 86 ANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADTTVIS 165 (316)
T ss_pred ccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCccEEe
Confidence 347899999999988765543222222 3345666766554211111122245666666656667777776643321
Q ss_pred -------eeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCC
Q psy6442 158 -------IESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 158 -------~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~ 197 (231)
+.....-..---.++|.|..+.|..+-+-+-++||.+..+
T Consensus 166 ~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~ 212 (316)
T COG3204 166 AKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQS 212 (316)
T ss_pred ccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecC
Confidence 1111111334567999999988888888888998887643
No 403
>PHA03098 kelch-like protein; Provisional
Probab=86.10 E-value=22 Score=31.52 Aligned_cols=67 Identities=15% Similarity=0.296 Sum_probs=35.8
Q ss_pred CCCEEEEecCC--------CeEEEEeCCCcc--eeeeccCCCCCeeEEEEcCCCCEEEEeeCC-----CcEEEEeCCCCC
Q psy6442 134 ERPIFVCGGED--------LKMYKFDYSTGA--EIESFKGHFGPIHCVKFSPDGELYASGSED-----GTLRLWQTNVGK 198 (231)
Q Consensus 134 ~~~~~~~g~~d--------~~i~~~d~~~~~--~~~~~~~h~~~V~~v~~spd~~~laS~s~d-----~~v~iwd~~~~~ 198 (231)
++.+.+.|+.. ..++.||..+.+ .+..+.........+. -++.+++.|+.+ +.|.+||..+.
T Consensus 437 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~- 513 (534)
T PHA03098 437 DGKIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCI--FNNKIYVVGGDKYEYYINEIEVYDDKTN- 513 (534)
T ss_pred CCEEEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEE--ECCEEEEEcCCcCCcccceeEEEeCCCC-
Confidence 45566666543 237888887653 2222221111111122 266777777654 46888887764
Q ss_pred eeeeeecc
Q psy6442 199 TYGLWKCI 206 (231)
Q Consensus 199 ~~~~~~~~ 206 (231)
.|+.+
T Consensus 514 ---~W~~~ 518 (534)
T PHA03098 514 ---TWTLF 518 (534)
T ss_pred ---EEEec
Confidence 57654
No 404
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.05 E-value=17 Score=29.59 Aligned_cols=153 Identities=14% Similarity=0.116 Sum_probs=85.7
Q ss_pred CceEEEEeCCcceeEEEccCCCE-EEEE-c-CCeEEEEECCCcceEEeeeccceeEEEE-EEecCCCCEEEEecCC----
Q psy6442 73 AEVQKLEFGAVPNSLEISRDGTT-ITVT-H-GSCVTFLDANSLELIKEHKVPAQVHSAS-LLLNSERPIFVCGGED---- 144 (231)
Q Consensus 73 ~~~~~~~~~~~~~~v~~~~~~~~-~~~~-~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~d---- 144 (231)
+++..+.++..--.++++|.-.. ++.. . +....++|......+.....+..-+.+- =.+++++.+|...-.|
T Consensus 59 k~v~~~~lpaR~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~ 138 (366)
T COG3490 59 KIVFATALPARGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPN 138 (366)
T ss_pred ceeeeeecccccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCC
Confidence 44444444455555666665442 2222 1 3344567766655444332221111100 0137888877765333
Q ss_pred -CeEEEEeCCCc-ceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEE--------eCCCCCe-eeeeeccCCcccCC
Q psy6442 145 -LKMYKFDYSTG-AEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLW--------QTNVGKT-YGLWKCIEGGLNNS 213 (231)
Q Consensus 145 -~~i~~~d~~~~-~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iw--------d~~~~~~-~~~~~~~~~~~~~~ 213 (231)
+.|-+||.+.+ +.+.++..|.--.+.+.+.+||+.++.+. |-|+.- |+.+-++ .-+.+.+.+.+.-+
T Consensus 139 rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan--GGIethpdfgR~~lNldsMePSlvlld~atG~liek 216 (366)
T COG3490 139 RGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN--GGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEK 216 (366)
T ss_pred CceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeC--CceecccccCccccchhhcCccEEEEeccccchhhh
Confidence 67889998754 45677888888889999999999887664 334443 2223232 23445556666666
Q ss_pred CCCCccccccceee
Q psy6442 214 LGLDSSGHLNNVHE 227 (231)
Q Consensus 214 ~~~~~~~~~~~~~~ 227 (231)
.-.-.+.+++-++-
T Consensus 217 h~Lp~~l~~lSiRH 230 (366)
T COG3490 217 HTLPASLRQLSIRH 230 (366)
T ss_pred ccCchhhhhcceee
Confidence 66655666665553
No 405
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=85.87 E-value=13 Score=32.71 Aligned_cols=60 Identities=15% Similarity=0.304 Sum_probs=45.7
Q ss_pred CCCEEEEEeCCCCEEEEeCCCCCceEEEE-eCCcceeEEEccCCCEEEEEcCCeEEEEECC
Q psy6442 51 NNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVTHGSCVTFLDAN 110 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~ 110 (231)
.+.+++.+|.-|-||+||.-.......++ ++..+..+..+.+|..+++.+.+.+.+.|..
T Consensus 572 esGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~yllL~d~~ 632 (776)
T COG5167 572 ESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKNYLLLTDVP 632 (776)
T ss_pred cCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecceEEEEecc
Confidence 46789999999999999964332222222 4667888889999999999998888888754
No 406
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=85.82 E-value=15 Score=31.62 Aligned_cols=79 Identities=13% Similarity=0.228 Sum_probs=53.8
Q ss_pred EEEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeE-EEEcCC-----------------CCEE-EEeeCCC
Q psy6442 127 ASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHC-VKFSPD-----------------GELY-ASGSEDG 187 (231)
Q Consensus 127 ~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~-v~~spd-----------------~~~l-aS~s~d~ 187 (231)
.++..+|.+.+++....-|+|.++|+.++..++.++|..++=.. +..... ..+| +-+-.-|
T Consensus 311 ~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyaprRg 390 (415)
T PF14655_consen 311 ESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAPRRG 390 (415)
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEeccCC
Confidence 34455888888888777799999999998887777776543111 110000 1133 4445688
Q ss_pred cEEEEeCCCCCeeeeeec
Q psy6442 188 TLRLWQTNVGKTYGLWKC 205 (231)
Q Consensus 188 ~v~iwd~~~~~~~~~~~~ 205 (231)
.|.||.+++|.-+..++.
T Consensus 391 ~lEvW~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 391 ILEVWSMRQGPRVAAFNV 408 (415)
T ss_pred eEEEEecCCCCEEEEEEe
Confidence 899999999998887775
No 407
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=85.72 E-value=16 Score=29.01 Aligned_cols=146 Identities=18% Similarity=0.143 Sum_probs=74.1
Q ss_pred cEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcC-CeEE
Q psy6442 27 CVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHG-SCVT 105 (231)
Q Consensus 27 ~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~i~ 105 (231)
.+.+.+++++++.++... ...+...|.....++...... ....+..-+|++++....+..+ ...+
T Consensus 25 ~~~s~AvS~dg~~~A~v~---~~~~~~~L~~~~~~~~~~~~~-----------~g~~l~~PS~d~~g~~W~v~~~~~~~~ 90 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVS---EGDGGRSLYVGPAGGPVRPVL-----------TGGSLTRPSWDPDGWVWTVDDGSGGVR 90 (253)
T ss_pred cccceEECCCCCeEEEEE---EcCCCCEEEEEcCCCcceeec-----------cCCccccccccCCCCEEEEEcCCCceE
Confidence 678889999876554221 111223333333333333222 2234455578888776665443 3334
Q ss_pred EE-ECCCcce-EEeeecc--c-eeEEEEEEecCCCCEEEEec---CCCeEEEEeCC---Cc------ceeeeccCCCCCe
Q psy6442 106 FL-DANSLEL-IKEHKVP--A-QVHSASLLLNSERPIFVCGG---EDLKMYKFDYS---TG------AEIESFKGHFGPI 168 (231)
Q Consensus 106 ~~-d~~~~~~-~~~~~~~--~-~~~~~~~~~~~~~~~~~~g~---~d~~i~~~d~~---~~------~~~~~~~~h~~~V 168 (231)
++ +...... ......+ . ++.. +..++++..++.-. .++++++--+. .+ ..+.........+
T Consensus 91 ~~~~~~~g~~~~~~v~~~~~~~~I~~--l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v 168 (253)
T PF10647_consen 91 VVRDSASGTGEPVEVDWPGLRGRITA--LRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDV 168 (253)
T ss_pred EEEecCCCcceeEEecccccCCceEE--EEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcc
Confidence 44 2222111 1111211 1 3444 44588888766543 34666665331 22 1122222334678
Q ss_pred eEEEEcCCCCEEEEeeCCCc
Q psy6442 169 HCVKFSPDGELYASGSEDGT 188 (231)
Q Consensus 169 ~~v~~spd~~~laS~s~d~~ 188 (231)
.+++|.+++.+++.+...+.
T Consensus 169 ~~v~W~~~~~L~V~~~~~~~ 188 (253)
T PF10647_consen 169 TDVAWSDDSTLVVLGRSAGG 188 (253)
T ss_pred eeeeecCCCEEEEEeCCCCC
Confidence 99999999987776654443
No 408
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=85.56 E-value=6.9 Score=33.58 Aligned_cols=30 Identities=23% Similarity=0.468 Sum_probs=25.5
Q ss_pred CeeEEEEcCCCCEEEEeeCCCcEEEEeCCC
Q psy6442 167 PIHCVKFSPDGELYASGSEDGTLRLWQTNV 196 (231)
Q Consensus 167 ~V~~v~~spd~~~laS~s~d~~v~iwd~~~ 196 (231)
.|.+++..+..+.|.+.+.++.|.+|++..
T Consensus 191 ~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 191 KIVQVAVDPSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp -EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred ceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence 489999999999999999999999999975
No 409
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=84.74 E-value=21 Score=29.36 Aligned_cols=131 Identities=20% Similarity=0.226 Sum_probs=62.5
Q ss_pred CcceeEEEccCCCEEEEEcCCeE-EEEECCCcceEEeee--ccceeEEEEEEecCCCCEEEEecCCCeEEEEeC-CCcce
Q psy6442 82 AVPNSLEISRDGTTITVTHGSCV-TFLDANSLELIKEHK--VPAQVHSASLLLNSERPIFVCGGEDLKMYKFDY-STGAE 157 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~~~i-~~~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~-~~~~~ 157 (231)
..+..+..++++.+++++..+.+ .-||.-.. ....+. ....+..+.+ .+++.+...+ ..+.|+.=+. ...+.
T Consensus 145 gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~-~w~~~~r~~~~riq~~gf--~~~~~lw~~~-~Gg~~~~s~~~~~~~~ 220 (302)
T PF14870_consen 145 GSINDITRSSDGRYVAVSSRGNFYSSWDPGQT-TWQPHNRNSSRRIQSMGF--SPDGNLWMLA-RGGQIQFSDDPDDGET 220 (302)
T ss_dssp --EEEEEE-TTS-EEEEETTSSEEEEE-TT-S-S-EEEE--SSS-EEEEEE---TTS-EEEEE-TTTEEEEEE-TTEEEE
T ss_pred ceeEeEEECCCCcEEEEECcccEEEEecCCCc-cceEEccCccceehhcee--cCCCCEEEEe-CCcEEEEccCCCCccc
Confidence 45677888999999988876644 45664321 122222 2334444444 6666654443 6777776652 12111
Q ss_pred ee----eccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCc
Q psy6442 158 IE----SFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDS 218 (231)
Q Consensus 158 ~~----~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (231)
-. ....-.-.+.+++|.|++..+|+|+. |++ +.....||.++.=+.+.+--+|...+++
T Consensus 221 w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~-G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f 283 (302)
T PF14870_consen 221 WSEPIIPIKTNGYGILDLAYRPPNEIWAVGGS-GTL-LVSTDGGKTWQKDRVGENVPSNLYRIVF 283 (302)
T ss_dssp E---B-TTSS--S-EEEEEESSSS-EEEEEST-T-E-EEESSTTSS-EE-GGGTTSSS---EEEE
T ss_pred cccccCCcccCceeeEEEEecCCCCEEEEeCC-ccE-EEeCCCCccceECccccCCCCceEEEEE
Confidence 11 11112223789999999988887765 433 3455678766655554444445544444
No 410
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=84.35 E-value=25 Score=31.56 Aligned_cols=99 Identities=19% Similarity=0.321 Sum_probs=57.3
Q ss_pred EEEEEeCCCCEEEEeCCC-----CCce--EEEEeC----CcceeEEEccCCCEEEEEcCCeE-EEEE--CCCcceEEeee
Q psy6442 54 RLISCAEDKTVRLWDVSA-----SAEV--QKLEFG----AVPNSLEISRDGTTITVTHGSCV-TFLD--ANSLELIKEHK 119 (231)
Q Consensus 54 ~l~s~s~D~ti~iwd~~~-----~~~~--~~~~~~----~~~~~v~~~~~~~~~~~~~~~~i-~~~d--~~~~~~~~~~~ 119 (231)
.|....--+.|-+|.+.- .+.+ ++.+.. --+-.+.|+|....+.+-....+ .+.+ ..+......++
T Consensus 74 aLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~ 153 (671)
T PF15390_consen 74 ALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIK 153 (671)
T ss_pred ceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEecc
Confidence 455566678899998752 1221 222222 23567889999887766443323 2223 22333344455
Q ss_pred ccceeEEEEEEecCCCCEEEEe-cCCCeEEEEeCCC
Q psy6442 120 VPAQVHSASLLLNSERPIFVCG-GEDLKMYKFDYST 154 (231)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~g-~~d~~i~~~d~~~ 154 (231)
....+++.+| ..+|+.++.+ +....-++||-..
T Consensus 154 ~~G~IhCACW--T~DG~RLVVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 154 TSGLIHCACW--TKDGQRLVVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred CCceEEEEEe--cCcCCEEEEEeCCeEEEEEecCch
Confidence 5667788777 4566655443 4567788998643
No 411
>KOG3616|consensus
Probab=84.11 E-value=11 Score=34.73 Aligned_cols=55 Identities=9% Similarity=0.152 Sum_probs=33.4
Q ss_pred ccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCE
Q psy6442 26 GCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTT 95 (231)
Q Consensus 26 ~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 95 (231)
..+.++.-+|. ++.+++++.||+|++++....+.........+...+.+...|..
T Consensus 15 e~~~aiqshp~---------------~~s~v~~~~d~si~lfn~~~r~qski~~~~~p~~nlv~tnhgl~ 69 (1636)
T KOG3616|consen 15 EFTTAIQSHPG---------------GQSFVLAHQDGSIILFNFIPRRQSKICEEAKPKENLVFTNHGLV 69 (1636)
T ss_pred ceeeeeeecCC---------------CceEEEEecCCcEEEEeecccchhhhhhhcCCccceeeeccceE
Confidence 34566666665 44589999999999999865544222223334445555554433
No 412
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=84.01 E-value=2.8 Score=27.60 Aligned_cols=45 Identities=18% Similarity=0.153 Sum_probs=30.5
Q ss_pred EEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcC
Q psy6442 57 SCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHG 101 (231)
Q Consensus 57 s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 101 (231)
.+..+|.+.-||..+++....+.--.-++.|+.++|+..++++.-
T Consensus 32 e~~~~GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~Et 76 (89)
T PF03088_consen 32 EGRPTGRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVAET 76 (89)
T ss_dssp HT---EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEEEG
T ss_pred cCCCCcCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEEec
Confidence 345567788899998876444443457899999999998887643
No 413
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=83.06 E-value=14 Score=26.28 Aligned_cols=103 Identities=15% Similarity=0.204 Sum_probs=61.3
Q ss_pred CEEEEEeCCCCEEEEeCCCC--------CceEEEEeCCcceeEEEcc-----CCCEEEEEcCCeEEEEECCCcceEEeee
Q psy6442 53 TRLISCAEDKTVRLWDVSAS--------AEVQKLEFGAVPNSLEISR-----DGTTITVTHGSCVTFLDANSLELIKEHK 119 (231)
Q Consensus 53 ~~l~s~s~D~ti~iwd~~~~--------~~~~~~~~~~~~~~v~~~~-----~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 119 (231)
..|+.+..-++|.|.+.... ..++.+.+...+.+++-.+ +...++++....+..||......+-..+
T Consensus 11 pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt~t~llaYDV~~N~d~Fyke 90 (136)
T PF14781_consen 11 PCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGTQTSLLAYDVENNSDLFYKE 90 (136)
T ss_pred eeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEeccceEEEEEcccCchhhhhh
Confidence 35777778888999987633 3456677788888886443 2336777778888889976654443333
Q ss_pred ccceeEEEEEEe-cC-CCCEEEEecCCCeEEEEeCCCcc
Q psy6442 120 VPAQVHSASLLL-NS-ERPIFVCGGEDLKMYKFDYSTGA 156 (231)
Q Consensus 120 ~~~~~~~~~~~~-~~-~~~~~~~g~~d~~i~~~d~~~~~ 156 (231)
.+..++++.+-. .. ..++ +..+....|+-||..-.+
T Consensus 91 ~~DGvn~i~~g~~~~~~~~l-~ivGGncsi~Gfd~~G~e 128 (136)
T PF14781_consen 91 VPDGVNAIVIGKLGDIPSPL-VIVGGNCSIQGFDYEGNE 128 (136)
T ss_pred CccceeEEEEEecCCCCCcE-EEECceEEEEEeCCCCcE
Confidence 444454444321 11 2333 333445666666654333
No 414
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=81.96 E-value=5.9 Score=21.04 Aligned_cols=28 Identities=25% Similarity=0.423 Sum_probs=17.9
Q ss_pred CCCeeEEEEcCCCCEEEEee-CC--CcEEEE
Q psy6442 165 FGPIHCVKFSPDGELYASGS-ED--GTLRLW 192 (231)
Q Consensus 165 ~~~V~~v~~spd~~~laS~s-~d--~~v~iw 192 (231)
.+.-....|||||+.|+-++ .+ |.-.||
T Consensus 8 ~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 8 PGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 34556788999998776555 44 555555
No 415
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=81.84 E-value=4.9 Score=26.42 Aligned_cols=43 Identities=21% Similarity=0.230 Sum_probs=26.7
Q ss_pred EecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEe
Q psy6442 140 CGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASG 183 (231)
Q Consensus 140 ~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~ 183 (231)
.+...|++..||..+++..--+.+ -.-.+.|+++||+.+++.+
T Consensus 32 e~~~~GRll~ydp~t~~~~vl~~~-L~fpNGVals~d~~~vlv~ 74 (89)
T PF03088_consen 32 EGRPTGRLLRYDPSTKETTVLLDG-LYFPNGVALSPDESFVLVA 74 (89)
T ss_dssp HT---EEEEEEETTTTEEEEEEEE-ESSEEEEEE-TTSSEEEEE
T ss_pred cCCCCcCEEEEECCCCeEEEehhC-CCccCeEEEcCCCCEEEEE
Confidence 355678999999988763222222 2357899999999966655
No 416
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=81.35 E-value=4.6 Score=19.98 Aligned_cols=25 Identities=24% Similarity=0.537 Sum_probs=18.3
Q ss_pred eeEEEEcCCCCEEEEeeCCCcEEEE
Q psy6442 168 IHCVKFSPDGELYASGSEDGTLRLW 192 (231)
Q Consensus 168 V~~v~~spd~~~laS~s~d~~v~iw 192 (231)
...++++++|+++++=+....|++|
T Consensus 4 P~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 4 PHGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred CcEEEEeCCCCEEEEECCCCEEEEC
Confidence 4677888888887777777777654
No 417
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=81.33 E-value=23 Score=27.49 Aligned_cols=146 Identities=16% Similarity=0.168 Sum_probs=81.8
Q ss_pred CCCEEEEEeCCC--CEEEEeCCCCCceEEEEeC-CcceeEEEccCCCEE--EEEcCCeEEEEECCCcceEEeeeccceeE
Q psy6442 51 NNTRLISCAEDK--TVRLWDVSASAEVQKLEFG-AVPNSLEISRDGTTI--TVTHGSCVTFLDANSLELIKEHKVPAQVH 125 (231)
Q Consensus 51 ~~~~l~s~s~D~--ti~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~--~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 125 (231)
++..+.|.+.-| .|++||++.++.+....+. +.++.=-+..-+..+ ..-.++.-..+|.++.+.+.++..+.+--
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~GeGW 134 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSYEGEGW 134 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccccCCcce
Confidence 455666766543 5889999998887666554 222211122222222 22345555667888777777776655433
Q ss_pred EEEEEecCCCCEEEEecCCCeEEEEeCCCcceeee----ccCC-CCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCee
Q psy6442 126 SASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIES----FKGH-FGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 126 ~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~----~~~h-~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~ 200 (231)
.+ ..++..+..++...+++.-|.++-.++.+ +.|- -..++.+.| =||.++|-.=.+..|..-+..+|++.
T Consensus 135 gL----t~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~-VdG~lyANVw~t~~I~rI~p~sGrV~ 209 (262)
T COG3823 135 GL----TSDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEW-VDGELYANVWQTTRIARIDPDSGRVV 209 (262)
T ss_pred ee----ecCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceee-eccEEEEeeeeecceEEEcCCCCcEE
Confidence 32 33455577766666777767655443332 2221 112233333 25666666655666766778888876
Q ss_pred e
Q psy6442 201 G 201 (231)
Q Consensus 201 ~ 201 (231)
.
T Consensus 210 ~ 210 (262)
T COG3823 210 A 210 (262)
T ss_pred E
Confidence 4
No 418
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=81.31 E-value=25 Score=27.92 Aligned_cols=112 Identities=11% Similarity=0.156 Sum_probs=65.3
Q ss_pred CcceeEEEccCCCEEEE-Ec-CCeEEEEECCCcceEEeeeccc--eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcc-
Q psy6442 82 AVPNSLEISRDGTTITV-TH-GSCVTFLDANSLELIKEHKVPA--QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA- 156 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~-~~-~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~- 156 (231)
..+..+++.|+...+++ .. .+.|..++. .++.++++.... ....+.. -.++.++++.-.++++..++.....
T Consensus 22 ~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y--~g~~~~vl~~Er~~~L~~~~~~~~~~ 98 (248)
T PF06977_consen 22 DELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITY--LGNGRYVLSEERDQRLYIFTIDDDTT 98 (248)
T ss_dssp S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE---STTEEEEEETTTTEEEEEEE----T
T ss_pred CCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEE--ECCCEEEEEEcCCCcEEEEEEecccc
Confidence 35788999998776554 44 356766776 467777776543 3333333 4566666665557888888773211
Q ss_pred -----eeeec-----cCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCC
Q psy6442 157 -----EIESF-----KGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNV 196 (231)
Q Consensus 157 -----~~~~~-----~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~ 196 (231)
....+ ..+...+-.++|.|.++.|..+-+..-.+|+.+..
T Consensus 99 ~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~ 148 (248)
T PF06977_consen 99 SLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNG 148 (248)
T ss_dssp T--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEES
T ss_pred ccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEcc
Confidence 11111 12445578899999887777777777778887654
No 419
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=80.80 E-value=33 Score=31.29 Aligned_cols=48 Identities=17% Similarity=0.312 Sum_probs=33.8
Q ss_pred CCCEEEEeCCCCCceEEEEe--CCcceeEEEc--cCCCE-EEEEcCCeEEEEE
Q psy6442 61 DKTVRLWDVSASAEVQKLEF--GAVPNSLEIS--RDGTT-ITVTHGSCVTFLD 108 (231)
Q Consensus 61 D~ti~iwd~~~~~~~~~~~~--~~~~~~v~~~--~~~~~-~~~~~~~~i~~~d 108 (231)
-.++.|||.+.+.......+ ...+.++.|. |+++. ++++....+.++.
T Consensus 50 ~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~ 102 (631)
T PF12234_consen 50 RSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYT 102 (631)
T ss_pred CCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEE
Confidence 45788999998876555555 5677777774 66664 5667777777764
No 420
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=80.65 E-value=7.8 Score=21.63 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=24.1
Q ss_pred ccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCC
Q psy6442 26 GCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSA 71 (231)
Q Consensus 26 ~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~ 71 (231)
|.|.++.|+|+... +..|+-+-.-+.|.|+|+++
T Consensus 1 GAvR~~kFsP~~~~------------~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGG------------NDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCc------------ccEEEEEccCCeEEEEEccc
Confidence 57889999986321 24566665668899999985
No 421
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=80.23 E-value=3 Score=37.12 Aligned_cols=30 Identities=20% Similarity=0.567 Sum_probs=25.9
Q ss_pred CCCEEEEEeCCCCEEEEeCCCCCceEEEEe
Q psy6442 51 NNTRLISCAEDKTVRLWDVSASAEVQKLEF 80 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~ 80 (231)
+...|++.+.|+++|+||+.+++++.+...
T Consensus 229 ~~~~l~tl~~D~~LRiW~l~t~~~~~~~~~ 258 (547)
T PF11715_consen 229 DDTFLFTLSRDHTLRIWSLETGQCLATIDL 258 (547)
T ss_dssp TTTEEEEEETTSEEEEEETTTTCEEEEEET
T ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEecc
Confidence 567899999999999999999999766543
No 422
>KOG2247|consensus
Probab=79.51 E-value=0.18 Score=43.34 Aligned_cols=133 Identities=16% Similarity=0.157 Sum_probs=82.8
Q ss_pred EEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEE--EcCCeEEEEECCCcceEE-eeeccceeEEEEEEe
Q psy6442 55 LISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITV--THGSCVTFLDANSLELIK-EHKVPAQVHSASLLL 131 (231)
Q Consensus 55 l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~ 131 (231)
++.++.+-.++.||-.... ......+....+++|..++..+++ -..+.+.+||.++....+ ....... .+ -..+
T Consensus 49 lavaca~tiv~~YD~agq~-~le~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~gg~~s-~s-ll~w 125 (615)
T KOG2247|consen 49 LAVACANTIVIYYDKAGQV-ILELNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLESGGTSS-KS-LLAW 125 (615)
T ss_pred eehhhhhhHHHhhhhhcce-ecccCCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhccCcch-HH-HHhh
Confidence 6677778888888854332 222223344567778777765543 346799999986532211 1111110 00 1233
Q ss_pred cCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEE
Q psy6442 132 NSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRL 191 (231)
Q Consensus 132 ~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~i 191 (231)
++....++.+...+.+.+++..+...+-.+-.|...+..+++.+.+. .+.++.|..+.+
T Consensus 126 sKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~-vil~dcd~~L~v 184 (615)
T KOG2247|consen 126 SKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDY-VILCDCDNTLSV 184 (615)
T ss_pred ccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccce-eeecCcHHHHHH
Confidence 66677778888889999998876665555544999999999999874 455666665543
No 423
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=78.29 E-value=50 Score=29.49 Aligned_cols=106 Identities=15% Similarity=0.096 Sum_probs=61.3
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCceEEEEeCCc--ce----------eEEEccCCCEEEEEcCCeEEEEECCCcceEEeee
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAEVQKLEFGAV--PN----------SLEISRDGTTITVTHGSCVTFLDANSLELIKEHK 119 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~--~~----------~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 119 (231)
+.+|+.++.++.|.-.|..+++.+-....... .. .+++. +++.++...++.+.-+|..+.+.+....
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~-~~~v~v~t~dg~l~ALDa~TGk~~W~~~ 147 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALY-DGKVFFGTLDARLVALDAKTGKVVWSKK 147 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEE-CCEEEEEcCCCEEEEEECCCCCEEeecc
Confidence 56778888889999999999988766543211 11 11111 2333344456788888888888776654
Q ss_pred ccc-----eeEEEEEEecCCCCEEEEec------CCCeEEEEeCCCcceeeec
Q psy6442 120 VPA-----QVHSASLLLNSERPIFVCGG------EDLKMYKFDYSTGAEIESF 161 (231)
Q Consensus 120 ~~~-----~~~~~~~~~~~~~~~~~~g~------~d~~i~~~d~~~~~~~~~~ 161 (231)
... .+.. ..... ++. ++.+. .++.|+-+|.++|+.+..+
T Consensus 148 ~~~~~~~~~~ts-sP~v~-~g~-Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~ 197 (527)
T TIGR03075 148 NGDYKAGYTITA-APLVV-KGK-VITGISGGEFGVRGYVTAYDAKTGKLVWRR 197 (527)
T ss_pred cccccccccccC-CcEEE-CCE-EEEeecccccCCCcEEEEEECCCCceeEec
Confidence 321 0110 00001 233 33332 2678999999998877553
No 424
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=77.54 E-value=39 Score=27.84 Aligned_cols=149 Identities=19% Similarity=0.273 Sum_probs=85.3
Q ss_pred CCCEEEEEeCCCCEEEEeCCCCCceEEEE-e-----CCcceeEEEccCCCEEEEEcC------------CeEEEEECCCc
Q psy6442 51 NNTRLISCAEDKTVRLWDVSASAEVQKLE-F-----GAVPNSLEISRDGTTITVTHG------------SCVTFLDANSL 112 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iwd~~~~~~~~~~~-~-----~~~~~~v~~~~~~~~~~~~~~------------~~i~~~d~~~~ 112 (231)
.+..|+++. ..+.+++...+.....+. . ...++.+.+.|+|...+.... +.+..++. ..
T Consensus 76 ~~g~Lv~~~--~g~~~~~~~~~~~~t~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g 152 (307)
T COG3386 76 AGGRLIACE--HGVRLLDPDTGGKITLLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DG 152 (307)
T ss_pred CCCeEEEEc--cccEEEeccCCceeEEeccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CC
Confidence 345666663 456677775554422222 1 135678899999987665333 12333333 22
Q ss_pred ceEEeeec-cceeEEEEEEecCCCCEEEEecC-CCeEEEEeCCC--cc----e-eeeccCCCCCeeEEEEcCCCCEEEEe
Q psy6442 113 ELIKEHKV-PAQVHSASLLLNSERPIFVCGGE-DLKMYKFDYST--GA----E-IESFKGHFGPIHCVKFSPDGELYASG 183 (231)
Q Consensus 113 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~-d~~i~~~d~~~--~~----~-~~~~~~h~~~V~~v~~spd~~~laS~ 183 (231)
...+.... -...+. +.++|+++.+..... ..+|+.+++.. +. . ...+..+.+..-.++...+|.+.+++
T Consensus 153 ~~~~l~~~~~~~~NG--la~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a 230 (307)
T COG3386 153 GVVRLLDDDLTIPNG--LAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAA 230 (307)
T ss_pred CEEEeecCcEEecCc--eEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEec
Confidence 22222221 112223 344889977766644 47788887752 21 1 12222345666678888889988755
Q ss_pred eCCC-cEEEEeCCCCCeeeeeec
Q psy6442 184 SEDG-TLRLWQTNVGKTYGLWKC 205 (231)
Q Consensus 184 s~d~-~v~iwd~~~~~~~~~~~~ 205 (231)
-.+| .|..|+.. |+.....+.
T Consensus 231 ~~~g~~v~~~~pd-G~l~~~i~l 252 (307)
T COG3386 231 VWGGGRVVRFNPD-GKLLGEIKL 252 (307)
T ss_pred ccCCceEEEECCC-CcEEEEEEC
Confidence 5554 89999998 888776653
No 425
>KOG2377|consensus
Probab=77.46 E-value=49 Score=28.94 Aligned_cols=146 Identities=13% Similarity=0.132 Sum_probs=81.3
Q ss_pred CCcceeEEEccCCCEEEEEc-CCeEEEEECCCcceE----Eeeeccc-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCC
Q psy6442 81 GAVPNSLEISRDGTTITVTH-GSCVTFLDANSLELI----KEHKVPA-QVHSASLLLNSERPIFVCGGEDLKMYKFDYST 154 (231)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~~~-~~~i~~~d~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~ 154 (231)
.+.+.++.|++|.+.+++.. +..+.+++....+.. .+++... .+...+| .....+.+.......++-.+...
T Consensus 66 ~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W--~~s~e~A~i~~~G~e~y~v~pek 143 (657)
T KOG2377|consen 66 KGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCW--TSSTEIAFITDQGIEFYQVLPEK 143 (657)
T ss_pred CCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEE--ecCeeEEEEecCCeEEEEEchhh
Confidence 35788999999999988864 567777775332221 2222222 2444444 33333333333334455554433
Q ss_pred cceeeeccCCCCCeeEEEEcCCCCE--EEEeeCCCcEEEEeCCCCCeeee--e--eccCCcccCC-CCCCccccccceee
Q psy6442 155 GAEIESFKGHFGPIHCVKFSPDGEL--YASGSEDGTLRLWQTNVGKTYGL--W--KCIEGGLNNS-LGLDSSGHLNNVHE 227 (231)
Q Consensus 155 ~~~~~~~~~h~~~V~~v~~spd~~~--laS~s~d~~v~iwd~~~~~~~~~--~--~~~~~~~~~~-~~~~~~~~~~~~~~ 227 (231)
. .++..+.|...|+=-+|.|+-+. |+|+-..+++.=+.++++....+ + +......+.+ +....+-|...||-
T Consensus 144 r-slRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~~~v~kLPkfe~~~p~~~~~~kp~lse~d~~L~tVYG 222 (657)
T KOG2377|consen 144 R-SLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRAGTMSKLPKFEIELPAAPKSTKPSLSERDIALATVYG 222 (657)
T ss_pred h-hhhhhhhcccCccEEEEccccceEeeeccccccccccEEEeeceeeeccceeecCCCCccCCCCcccccceEEEEEee
Confidence 2 24555678888888899998763 44444667777777766654432 1 1111111122 34445778888876
Q ss_pred ee
Q psy6442 228 VI 229 (231)
Q Consensus 228 ~~ 229 (231)
.+
T Consensus 223 ~l 224 (657)
T KOG2377|consen 223 QL 224 (657)
T ss_pred EE
Confidence 55
No 426
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=76.79 E-value=43 Score=27.96 Aligned_cols=162 Identities=16% Similarity=0.160 Sum_probs=77.3
Q ss_pred ceeeeccCCCeE--eee---ecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCC---CEEEEeCCCCCceEEE
Q psy6442 7 PMLRQGDTGDWI--GTF---EGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDK---TVRLWDVSASAEVQKL 78 (231)
Q Consensus 7 ~~~~~~~~g~~i--~~l---~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~---ti~iwd~~~~~~~~~~ 78 (231)
+.+++..+++.. ... ..-...+..+.|.++++.++. ...+.+. .+.+.|..++.+....
T Consensus 160 l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~-------------~~~nR~q~~~~l~~~d~~tg~~~~~~ 226 (353)
T PF00930_consen 160 LFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWV-------------QWLNRDQNRLDLVLCDASTGETRVVL 226 (353)
T ss_dssp EEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEE-------------EEEETTSTEEEEEEEEECTTTCEEEE
T ss_pred EEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEE-------------EEcccCCCEEEEEEEECCCCceeEEE
Confidence 445666666542 221 122345777888887663321 2222222 2445566665553333
Q ss_pred Ee--CC---cceeEEEc-cCCCEE-EEE-cCC--eEEEEECCCcceEEeeeccceeEEEEEEecCCCCEE-EEecC----
Q psy6442 79 EF--GA---VPNSLEIS-RDGTTI-TVT-HGS--CVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIF-VCGGE---- 143 (231)
Q Consensus 79 ~~--~~---~~~~v~~~-~~~~~~-~~~-~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~---- 143 (231)
.. .. ......+. +++..+ ..+ .++ .+.+++...............+..+ ...++++..+ .++..
T Consensus 227 ~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~~~lT~G~~~V~~i-~~~d~~~~~iyf~a~~~~p~ 305 (353)
T PF00930_consen 227 EETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKPRQLTSGDWEVTSI-LGWDEDNNRIYFTANGDNPG 305 (353)
T ss_dssp EEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEEEESS-SSS-EEEE-EEEECTSSEEEEEESSGGTT
T ss_pred EecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccccceeccccCceeeccc-ceEcCCCCEEEEEecCCCCC
Confidence 21 22 12244443 666543 333 333 5666777665544333334445332 2235554443 34443
Q ss_pred CCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEE
Q psy6442 144 DLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYAS 182 (231)
Q Consensus 144 d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS 182 (231)
...++..++..+..+..+....+.-..++|||++++++-
T Consensus 306 ~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~ 344 (353)
T PF00930_consen 306 ERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVD 344 (353)
T ss_dssp SBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEEE
T ss_pred ceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEEE
Confidence 235777777733445555433322268999999987654
No 427
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=76.76 E-value=42 Score=27.84 Aligned_cols=104 Identities=16% Similarity=0.289 Sum_probs=52.3
Q ss_pred cceeEEEccCCCEEEEEcCCeEEEEECCCcc--eEEee-e--c--cceeEEEEEEecCC----CCEEEEecCC-------
Q psy6442 83 VPNSLEISRDGTTITVTHGSCVTFLDANSLE--LIKEH-K--V--PAQVHSASLLLNSE----RPIFVCGGED------- 144 (231)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~-~--~--~~~~~~~~~~~~~~----~~~~~~g~~d------- 144 (231)
.+..+++.|++..++.-..+.|.+++..... .+... + . ......+.+ +|+ +.+.++....
T Consensus 3 ~P~~~a~~pdG~l~v~e~~G~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~--~p~f~~n~~lYv~~t~~~~~~~~~ 80 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVAERSGRIWVVDKDGSLKTPVADLPEVFADGERGLLGIAF--HPDFASNGYLYVYYTNADEDGGDN 80 (331)
T ss_dssp SEEEEEEETTSCEEEEETTTEEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE---TTCCCC-EEEEEEEEE-TSSSSE
T ss_pred CceEEEEeCCCcEEEEeCCceEEEEeCCCcCcceecccccccccccCCccccee--ccccCCCCEEEEEEEcccCCCCCc
Confidence 4678999999988777778899988833222 11111 1 1 112333333 552 3333333311
Q ss_pred -CeEEEEeCCCc-------c-eeeeccC---CCCCeeEEEEcCCCCEEEEeeCCCc
Q psy6442 145 -LKMYKFDYSTG-------A-EIESFKG---HFGPIHCVKFSPDGELYASGSEDGT 188 (231)
Q Consensus 145 -~~i~~~d~~~~-------~-~~~~~~~---h~~~V~~v~~spd~~~laS~s~d~~ 188 (231)
.+|..|....+ + .+..+.. ....-..|+|.|||.++++.+..+.
T Consensus 81 ~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~ 136 (331)
T PF07995_consen 81 DNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGN 136 (331)
T ss_dssp EEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTT
T ss_pred ceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCC
Confidence 24444544322 1 1122222 2234567999999988877776554
No 428
>KOG1900|consensus
Probab=76.38 E-value=45 Score=32.80 Aligned_cols=164 Identities=13% Similarity=0.140 Sum_probs=84.5
Q ss_pred CcCCCceeeeccCCCeEeeeecccccEEEEEEC-CCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCce-----
Q psy6442 2 CVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDIN-KDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEV----- 75 (231)
Q Consensus 2 ~~d~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~-~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~----- 75 (231)
..|+++.+|+-++++..+.+.+-+..|..|.+- |....+.. .=+.+..-++-..|.|+-+...+..
T Consensus 96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~--------~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~ 167 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVP--------EIQHLLVVATPVEIVILGVSFDEFTGELSI 167 (1311)
T ss_pred EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchh--------hhheeEEecccceEEEEEEEeccccCcccc
Confidence 368999999999888888888878888887653 33222111 1122222223334444433211110
Q ss_pred ----EEEEe-CCcceeEEEccCCCEEEEEcCCeEEE--EECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEE
Q psy6442 76 ----QKLEF-GAVPNSLEISRDGTTITVTHGSCVTF--LDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMY 148 (231)
Q Consensus 76 ----~~~~~-~~~~~~v~~~~~~~~~~~~~~~~i~~--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~ 148 (231)
.++.. +..++++....+|+.++++.++++.- |...+...-++ -.....+.+.-..+
T Consensus 168 f~~~~~i~~dg~~V~~I~~t~nGRIF~~G~dg~lyEl~Yq~~~gWf~~r----------------c~Kiclt~s~ls~l- 230 (1311)
T KOG1900|consen 168 FNTSFKISVDGVSVNCITYTENGRIFFAGRDGNLYELVYQAEDGWFGSR----------------CRKICLTKSVLSSL- 230 (1311)
T ss_pred cccceeeecCCceEEEEEeccCCcEEEeecCCCEEEEEEeccCchhhcc----------------cccccCchhHHHHh-
Confidence 11111 22445555556666666555553221 11111100000 00000011100000
Q ss_pred EEeCCCcceeeecc-CCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCC
Q psy6442 149 KFDYSTGAEIESFK-GHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNV 196 (231)
Q Consensus 149 ~~d~~~~~~~~~~~-~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~ 196 (231)
-+. +-.+. .+..+|..+.+.....++-+-++.++|++|++..
T Consensus 231 -----vPs-~~~~~~~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 231 -----VPS-LLSVPGSSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred -----hhh-hhcCCCCCCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence 001 11223 5788999999999999999999999999999865
No 429
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=75.16 E-value=54 Score=30.36 Aligned_cols=31 Identities=19% Similarity=0.222 Sum_probs=25.5
Q ss_pred CCCCeeEEEEcCCC---C---EEEEeeCCCcEEEEeC
Q psy6442 164 HFGPIHCVKFSPDG---E---LYASGSEDGTLRLWQT 194 (231)
Q Consensus 164 h~~~V~~v~~spd~---~---~laS~s~d~~v~iwd~ 194 (231)
|...|.+|+|-++. . .+++++-.|.+.+|++
T Consensus 209 ~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 209 HSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred cccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 55678999998853 2 7888999999999887
No 430
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=75.08 E-value=8.6 Score=19.34 Aligned_cols=22 Identities=32% Similarity=0.406 Sum_probs=18.4
Q ss_pred EEEEeeCCCcEEEEeCCCCCee
Q psy6442 179 LYASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 179 ~laS~s~d~~v~iwd~~~~~~~ 200 (231)
.+..++.++.+..+|..+|+..
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~ 29 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEIL 29 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEE
Confidence 5667788999999999999854
No 431
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=75.06 E-value=26 Score=29.82 Aligned_cols=69 Identities=16% Similarity=0.149 Sum_probs=40.1
Q ss_pred cCCCCEEEEecC-C--CeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCee
Q psy6442 132 NSERPIFVCGGE-D--LKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 132 ~~~~~~~~~g~~-d--~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~ 200 (231)
.+++..++.++. + ..++..|+.+++..+-..+-........++|+.+.+.-....++|+--|+.+.+..
T Consensus 44 t~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~ 115 (386)
T PF14583_consen 44 TDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEER 115 (386)
T ss_dssp -TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EE
T ss_pred CCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEE
Confidence 456655555443 4 46888899988866554443333446778899888877767788999999998864
No 432
>KOG2444|consensus
Probab=74.42 E-value=16 Score=28.62 Aligned_cols=66 Identities=21% Similarity=0.327 Sum_probs=37.7
Q ss_pred CCEEEEecCCCeEEEEeCCC-cceeeeccCCCCCee-EEEEcCCCCEEEEeeCCCcEEEEeCCCCCee
Q psy6442 135 RPIFVCGGEDLKMYKFDYST-GAEIESFKGHFGPIH-CVKFSPDGELYASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 135 ~~~~~~g~~d~~i~~~d~~~-~~~~~~~~~h~~~V~-~v~~spd~~~laS~s~d~~v~iwd~~~~~~~ 200 (231)
..-++.|+.++.|++|.... +.....+..-..+|- -+.--.++.+..+++.|+.||.|++.-.+..
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~ 137 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVL 137 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCcee
Confidence 44578889999999887652 221111111112222 1222234457777888888888887666654
No 433
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=74.14 E-value=11 Score=20.03 Aligned_cols=26 Identities=23% Similarity=0.304 Sum_probs=20.2
Q ss_pred EEEeeCCCcEEEEeCCCCCeeeeeec
Q psy6442 180 YASGSEDGTLRLWQTNVGKTYGLWKC 205 (231)
Q Consensus 180 laS~s~d~~v~iwd~~~~~~~~~~~~ 205 (231)
+..++.||.|.-.|.++|+.....+.
T Consensus 3 v~~~~~~g~l~AlD~~TG~~~W~~~~ 28 (38)
T PF01011_consen 3 VYVGTPDGYLYALDAKTGKVLWKFQT 28 (38)
T ss_dssp EEEETTTSEEEEEETTTTSEEEEEES
T ss_pred EEEeCCCCEEEEEECCCCCEEEeeeC
Confidence 33458999999999999997655553
No 434
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=73.59 E-value=78 Score=29.41 Aligned_cols=73 Identities=10% Similarity=0.053 Sum_probs=47.9
Q ss_pred eEEEEEEecCCCCEEEEecCCCeEEEEeCCCc-----------c------eee-ec-cCCCCCeeEEEEc--CCCCEEEE
Q psy6442 124 VHSASLLLNSERPIFVCGGEDLKMYKFDYSTG-----------A------EIE-SF-KGHFGPIHCVKFS--PDGELYAS 182 (231)
Q Consensus 124 ~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~-----------~------~~~-~~-~~h~~~V~~v~~s--pd~~~laS 182 (231)
++.+.+..-.+..+|+.+.+||.+..|.+++- . .+. -| ..-.+.+++++++ ...+++|.
T Consensus 103 IN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAV 182 (717)
T PF08728_consen 103 INFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAV 182 (717)
T ss_pred eeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEE
Confidence 33333333455667888999999999965210 0 000 01 1134578999999 78889999
Q ss_pred eeCCCcEEEEeCCC
Q psy6442 183 GSEDGTLRLWQTNV 196 (231)
Q Consensus 183 ~s~d~~v~iwd~~~ 196 (231)
++....|.||=+..
T Consensus 183 SsNs~~VTVFaf~l 196 (717)
T PF08728_consen 183 SSNSQEVTVFAFAL 196 (717)
T ss_pred ecCCceEEEEEEec
Confidence 99999999987654
No 435
>PHA02713 hypothetical protein; Provisional
Probab=73.21 E-value=70 Score=28.75 Aligned_cols=49 Identities=16% Similarity=0.219 Sum_probs=24.4
Q ss_pred eEEEEeCCCcc--eeeeccCCCCCeeEEEEcCCCCEEEEeeCC------CcEEEEeCCC
Q psy6442 146 KMYKFDYSTGA--EIESFKGHFGPIHCVKFSPDGELYASGSED------GTLRLWQTNV 196 (231)
Q Consensus 146 ~i~~~d~~~~~--~~~~~~~h~~~V~~v~~spd~~~laS~s~d------~~v~iwd~~~ 196 (231)
.+..||..+.+ .+..+... ....-+..-++.+.+.|+.+ ..+..||..+
T Consensus 433 ~ve~YDP~td~W~~v~~m~~~--r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~ 489 (557)
T PHA02713 433 KVIRYDTVNNIWETLPNFWTG--TIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNT 489 (557)
T ss_pred eEEEECCCCCeEeecCCCCcc--cccCcEEEECCEEEEEeCCCCCCccceeEEEecCCC
Confidence 46678876542 22222211 11111223346677777654 2356788776
No 436
>KOG4441|consensus
Probab=71.90 E-value=77 Score=28.65 Aligned_cols=144 Identities=13% Similarity=0.150 Sum_probs=67.2
Q ss_pred CCCEEEEEeCC------CCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEE--EcC-----CeEEEEECCCcceEEe
Q psy6442 51 NNTRLISCAED------KTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITV--THG-----SCVTFLDANSLELIKE 117 (231)
Q Consensus 51 ~~~~l~s~s~D------~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~-----~~i~~~d~~~~~~~~~ 117 (231)
++...++||.| .++..||....+-...-.....-.......-+..+++ +.+ ..+..||..+.+-...
T Consensus 332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~v 411 (571)
T KOG4441|consen 332 NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPV 411 (571)
T ss_pred CCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCccccc
Confidence 56678888888 3577788776653221111111112222221222222 222 2466677654332211
Q ss_pred eeccceeEEEEEEecCCCCEEEEecCCC------eEEEEeCCCcc--eeeeccCCCCCeeEEEEcCCCCEEEEeeCCCc-
Q psy6442 118 HKVPAQVHSASLLLNSERPIFVCGGEDL------KMYKFDYSTGA--EIESFKGHFGPIHCVKFSPDGELYASGSEDGT- 188 (231)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~g~~d~------~i~~~d~~~~~--~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~- 188 (231)
...+........ ..-++.+.+.||.++ .+..||..+.. .+..+..-... .. .-.-++.+++.|+.|+.
T Consensus 412 a~m~~~r~~~gv-~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~-~g-~a~~~~~iYvvGG~~~~~ 488 (571)
T KOG4441|consen 412 APMLTRRSGHGV-AVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSG-FG-VAVLNGKIYVVGGFDGTS 488 (571)
T ss_pred CCCCcceeeeEE-EEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCccccccc-ce-EEEECCEEEEECCccCCC
Confidence 111111111111 123677778887553 46677776553 22222211111 11 22235677888887763
Q ss_pred ----EEEEeCCCC
Q psy6442 189 ----LRLWQTNVG 197 (231)
Q Consensus 189 ----v~iwd~~~~ 197 (231)
|..+|..+.
T Consensus 489 ~~~~VE~ydp~~~ 501 (571)
T KOG4441|consen 489 ALSSVERYDPETN 501 (571)
T ss_pred ccceEEEEcCCCC
Confidence 667887664
No 437
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=70.90 E-value=57 Score=26.72 Aligned_cols=67 Identities=22% Similarity=0.389 Sum_probs=47.6
Q ss_pred EEEecCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCC-----CeeEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 128 SLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFG-----PIHCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 128 ~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~-----~V~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
++....++.+|++.-.-..|++.|.++++.+..+.|-.. +-...++..|-+++-....+++|.|||=
T Consensus 148 sV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFDN 219 (299)
T PF14269_consen 148 SVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFDN 219 (299)
T ss_pred eeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEcC
Confidence 344467788899988888999999989988888765421 1112455556666666677888888885
No 438
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=70.72 E-value=26 Score=30.52 Aligned_cols=68 Identities=18% Similarity=0.171 Sum_probs=43.7
Q ss_pred cCCCCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeee
Q psy6442 132 NSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYG 201 (231)
Q Consensus 132 ~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~ 201 (231)
....+-+++-+..|++..+.....+.+ -++.-...+.-+++||.+.+|++-. .|.++++.+++..+--
T Consensus 325 e~~rkgF~~l~~~G~L~~f~st~~~~l-L~~~~~~~~~~~~~Sp~~~~Ll~e~-~gki~~~~l~Nr~Pei 392 (733)
T COG4590 325 ETNRKGFYSLYRNGTLQSFYSTSEKLL-LFERAYQAPQLVAMSPNQAYLLSED-QGKIRLAQLENRNPEI 392 (733)
T ss_pred ccccceEEEEcCCCceeeeecccCcce-ehhhhhcCcceeeeCcccchheeec-CCceEEEEecCCCCCc
Confidence 334455667777788777754332221 1122223566789999999988655 4669999998887643
No 439
>KOG1916|consensus
Probab=69.25 E-value=3.9 Score=38.22 Aligned_cols=69 Identities=22% Similarity=0.385 Sum_probs=43.4
Q ss_pred EEEecCCCeEEEEeCCCcceeeeccCCCCCeeEE-----------EEcCCCCEEEEeeCCCcEEEEeCC-CCCe----ee
Q psy6442 138 FVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCV-----------KFSPDGELYASGSEDGTLRLWQTN-VGKT----YG 201 (231)
Q Consensus 138 ~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v-----------~~spd~~~laS~s~d~~v~iwd~~-~~~~----~~ 201 (231)
+-.+..++++++.+..+.. ...+.+|...+..+ ..||||..||.++.||.++.|.+- +|+. ..
T Consensus 198 ic~~~~~~~i~lL~~~ra~-~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclh 276 (1283)
T KOG1916|consen 198 ICYGLKGGEIRLLNINRAL-RSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLH 276 (1283)
T ss_pred eeeccCCCceeEeeechHH-HHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccHhhhh
Confidence 3445556676665543321 23445576555443 379999999999999999999863 3332 24
Q ss_pred eeeccC
Q psy6442 202 LWKCIE 207 (231)
Q Consensus 202 ~~~~~~ 207 (231)
+|+...
T Consensus 277 ewkphd 282 (1283)
T KOG1916|consen 277 EWKPHD 282 (1283)
T ss_pred ccCCCC
Confidence 566555
No 440
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=68.58 E-value=63 Score=26.28 Aligned_cols=55 Identities=15% Similarity=0.192 Sum_probs=32.7
Q ss_pred EecCCCCEEEEecCCCeEEEEeCCCcc---eeeecc--CC-CCCeeEEEEcC--CCCEEEEee
Q psy6442 130 LLNSERPIFVCGGEDLKMYKFDYSTGA---EIESFK--GH-FGPIHCVKFSP--DGELYASGS 184 (231)
Q Consensus 130 ~~~~~~~~~~~g~~d~~i~~~d~~~~~---~~~~~~--~h-~~~V~~v~~sp--d~~~laS~s 184 (231)
..++.+.+..+--....|..|+....- ....+. .. -.-+.++++.+ +|.+.+.+.
T Consensus 192 ~~D~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~v~sn 254 (287)
T PF03022_consen 192 AIDPNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLWVLSN 254 (287)
T ss_dssp EEETTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EEEEE-
T ss_pred EECCCCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEEEEEC
Confidence 346777777777778899999986521 122221 11 23567889999 777666554
No 441
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=68.27 E-value=77 Score=27.17 Aligned_cols=184 Identities=13% Similarity=0.076 Sum_probs=86.0
Q ss_pred ecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCC---------cceeEEEc--
Q psy6442 22 EGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGA---------VPNSLEIS-- 90 (231)
Q Consensus 22 ~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~---------~~~~v~~~-- 90 (231)
...+|+|.+++.+. =..++.|..+|++.|.|++....+....... .+.++.|.
T Consensus 83 ~~~~g~vtal~~S~----------------iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm 146 (395)
T PF08596_consen 83 DAKQGPVTALKNSD----------------IGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVM 146 (395)
T ss_dssp ---S-SEEEEEE-B----------------TSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEE
T ss_pred eccCCcEeEEecCC----------------CcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEE
Confidence 34477888887664 3578999999999999998766655533322 34455554
Q ss_pred ---cCCC---EEEE-EcCCeEEEEECCC--cc-e-E---Eee-eccceeEEEEEEecCCC-------------------C
Q psy6442 91 ---RDGT---TITV-THGSCVTFLDANS--LE-L-I---KEH-KVPAQVHSASLLLNSER-------------------P 136 (231)
Q Consensus 91 ---~~~~---~~~~-~~~~~i~~~d~~~--~~-~-~---~~~-~~~~~~~~~~~~~~~~~-------------------~ 136 (231)
.|+. .+++ ...+.+..|.+.. .. . . ... ....++..+.......+ .
T Consensus 147 ~~~~D~ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~ 226 (395)
T PF08596_consen 147 TLGGDGYSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIP 226 (395)
T ss_dssp E-TTSSSEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----
T ss_pred ecCCCcccceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcC
Confidence 2332 2334 3446666665321 11 1 0 111 11122222221111000 1
Q ss_pred EEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEc-----CCCCEEEEeeCCCcEEEEeCCCCCeeeeeec---cCC
Q psy6442 137 IFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFS-----PDGELYASGSEDGTLRLWQTNVGKTYGLWKC---IEG 208 (231)
Q Consensus 137 ~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~s-----pd~~~laS~s~d~~v~iwd~~~~~~~~~~~~---~~~ 208 (231)
-++....+..++++...+.+..+......-....+.+- ..+..|+.-..+|.|+++.+=.-+.+...+. .+.
T Consensus 227 g~vVvvSe~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~ 306 (395)
T PF08596_consen 227 GYVVVVSESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDS 306 (395)
T ss_dssp EEEEEE-SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---H
T ss_pred cEEEEEcccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCcccc
Confidence 12333346677888887766655433222233344453 3566788889999999999877777655443 222
Q ss_pred cccCCCCCCcccc
Q psy6442 209 GLNNSLGLDSSGH 221 (231)
Q Consensus 209 ~~~~~~~~~~~~~ 221 (231)
......++..+|.
T Consensus 307 ~~~~~ssis~~Gd 319 (395)
T PF08596_consen 307 RRLSSSSISRNGD 319 (395)
T ss_dssp HHHTT-EE-TTS-
T ss_pred ccccccEECCCCC
Confidence 3333444444444
No 442
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=68.14 E-value=26 Score=28.46 Aligned_cols=61 Identities=13% Similarity=0.285 Sum_probs=39.8
Q ss_pred CCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEee------CCCcEEEEeCCCCCeeeeeeccCC
Q psy6442 144 DLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGS------EDGTLRLWQTNVGKTYGLWKCIEG 208 (231)
Q Consensus 144 d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s------~d~~v~iwd~~~~~~~~~~~~~~~ 208 (231)
...|.+||....+=..--.+-.+.|+++.|..+.+++++|. ....+..||..+. .|+....
T Consensus 15 C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~----~w~~~~~ 81 (281)
T PF12768_consen 15 CPGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQ----TWSSLGG 81 (281)
T ss_pred CCEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCC----eeeecCC
Confidence 34577888655432222233457899999998778888775 4556788998764 4654444
No 443
>PHA03098 kelch-like protein; Provisional
Probab=67.29 E-value=91 Score=27.64 Aligned_cols=62 Identities=18% Similarity=0.255 Sum_probs=31.5
Q ss_pred CCCEEEEecCC------CeEEEEeCCCcc--eeeeccCCCCCeeEEEEcCCCCEEEEeeCCC--------cEEEEeCCCC
Q psy6442 134 ERPIFVCGGED------LKMYKFDYSTGA--EIESFKGHFGPIHCVKFSPDGELYASGSEDG--------TLRLWQTNVG 197 (231)
Q Consensus 134 ~~~~~~~g~~d------~~i~~~d~~~~~--~~~~~~~h~~~V~~v~~spd~~~laS~s~d~--------~v~iwd~~~~ 197 (231)
++.+.+.|+.+ ..+..||..+.+ .+..+...... .+ +...++.+++.|+.+. .+.+||..+.
T Consensus 389 ~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~-~~-~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 466 (534)
T PHA03098 389 NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYG-GC-AIYHDGKIYVIGGISYIDNIKVYNIVESYNPVTN 466 (534)
T ss_pred CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccC-ce-EEEECCEEEEECCccCCCCCcccceEEEecCCCC
Confidence 45666777632 357788876542 12222111111 11 2233566677776432 2778887764
No 444
>PRK10115 protease 2; Provisional
Probab=65.30 E-value=1.2e+02 Score=28.21 Aligned_cols=49 Identities=14% Similarity=0.056 Sum_probs=28.0
Q ss_pred CEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEE-cC------CeEEEEECCCc
Q psy6442 63 TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HG------SCVTFLDANSL 112 (231)
Q Consensus 63 ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~------~~i~~~d~~~~ 112 (231)
+|++-|+.++..+... +......++|.+|+..++.. .+ ..+..+++.+.
T Consensus 154 ~l~v~d~~tg~~l~~~-i~~~~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~ 209 (686)
T PRK10115 154 GIRFRNLETGNWYPEL-LDNVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTP 209 (686)
T ss_pred EEEEEECCCCCCCCcc-ccCcceEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCCC
Confidence 4778888777533221 11222568999998866543 21 24555666554
No 445
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=64.73 E-value=85 Score=26.40 Aligned_cols=101 Identities=14% Similarity=0.251 Sum_probs=52.2
Q ss_pred CcceeEEEccCCCEEEEEcCCeEEEE-ECCCc-----c--eE-Eeeecc---ceeEEEEEEecCCCCEEEEecC------
Q psy6442 82 AVPNSLEISRDGTTITVTHGSCVTFL-DANSL-----E--LI-KEHKVP---AQVHSASLLLNSERPIFVCGGE------ 143 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~~~i~~~-d~~~~-----~--~~-~~~~~~---~~~~~~~~~~~~~~~~~~~g~~------ 143 (231)
..+..+++.+++ ++++....|..+ |.... + .+ ..+... ..-....+.+.+++.+.++-+.
T Consensus 72 ~~p~Gi~~~~~G--lyV~~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~ 149 (367)
T TIGR02604 72 SMVTGLAVAVGG--VYVATPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKV 149 (367)
T ss_pred CCccceeEecCC--EEEeCCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCcee
Confidence 356888898888 555555555544 43211 1 11 111111 0101112333677766554331
Q ss_pred -------------CCeEEEEeCCCcceeeec-cCCCCCeeEEEEcCCCCEEEEeeCC
Q psy6442 144 -------------DLKMYKFDYSTGAEIESF-KGHFGPIHCVKFSPDGELYASGSED 186 (231)
Q Consensus 144 -------------d~~i~~~d~~~~~~~~~~-~~h~~~V~~v~~spd~~~laS~s~d 186 (231)
.+.|+.++...++ +..+ .++ .....++|+|+|+++++-..+
T Consensus 150 ~~~~~~~~~~~~~~g~i~r~~pdg~~-~e~~a~G~-rnp~Gl~~d~~G~l~~tdn~~ 204 (367)
T TIGR02604 150 TRPGTSDESRQGLGGGLFRYNPDGGK-LRVVAHGF-QNPYGHSVDSWGDVFFCDNDD 204 (367)
T ss_pred ccCCCccCcccccCceEEEEecCCCe-EEEEecCc-CCCccceECCCCCEEEEccCC
Confidence 1457777765444 2233 333 345689999999988765533
No 446
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=60.82 E-value=43 Score=27.78 Aligned_cols=56 Identities=27% Similarity=0.453 Sum_probs=36.4
Q ss_pred CCCEEEEecCCCeEEEEeCCCcce---eee-ccCCCCCeeEEEEcCCCCEEEEeeCCCcE
Q psy6442 134 ERPIFVCGGEDLKMYKFDYSTGAE---IES-FKGHFGPIHCVKFSPDGELYASGSEDGTL 189 (231)
Q Consensus 134 ~~~~~~~g~~d~~i~~~d~~~~~~---~~~-~~~h~~~V~~v~~spd~~~laS~s~d~~v 189 (231)
.+.++++.-..++|+..++..+.. ... +......+.++++.|||.++++-..+|.|
T Consensus 270 ~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~i 329 (331)
T PF07995_consen 270 RGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKI 329 (331)
T ss_dssp TTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTE
T ss_pred cCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECCCCeE
Confidence 344555555567788777764422 222 23444589999999999999988888876
No 447
>KOG4499|consensus
Probab=60.74 E-value=84 Score=25.02 Aligned_cols=85 Identities=15% Similarity=0.256 Sum_probs=54.6
Q ss_pred ccccccCCCEEEEEeCCCCEEEEe--CCCCCc-----eEEEEe-----CCcceeEEEccCCCEEEE-EcCCeEEEEECCC
Q psy6442 45 ADFQAKNNTRLISCAEDKTVRLWD--VSASAE-----VQKLEF-----GAVPNSLEISRDGTTITV-THGSCVTFLDANS 111 (231)
Q Consensus 45 ~d~~~~~~~~l~s~s~D~ti~iwd--~~~~~~-----~~~~~~-----~~~~~~v~~~~~~~~~~~-~~~~~i~~~d~~~ 111 (231)
.+|........++=+.+-+|.-|| ..++.. +..+.- ...+..+++..+|...++ -.++++..+|..+
T Consensus 163 l~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~t 242 (310)
T KOG4499|consen 163 LAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTT 242 (310)
T ss_pred ccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCC
Confidence 344433445567777788888888 444432 222211 124566777777775444 4578999999999
Q ss_pred cceEEeeeccce-eEEEEE
Q psy6442 112 LELIKEHKVPAQ-VHSASL 129 (231)
Q Consensus 112 ~~~~~~~~~~~~-~~~~~~ 129 (231)
++.+.+++.|.+ +.++++
T Consensus 243 GK~L~eiklPt~qitsccF 261 (310)
T KOG4499|consen 243 GKILLEIKLPTPQITSCCF 261 (310)
T ss_pred CcEEEEEEcCCCceEEEEe
Confidence 999999998864 444444
No 448
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=58.43 E-value=86 Score=24.38 Aligned_cols=30 Identities=27% Similarity=0.516 Sum_probs=19.5
Q ss_pred CCeeEEEEcCC-CCEEEEeeCCCcEEEEeCCCC
Q psy6442 166 GPIHCVKFSPD-GELYASGSEDGTLRLWQTNVG 197 (231)
Q Consensus 166 ~~V~~v~~spd-~~~laS~s~d~~v~iwd~~~~ 197 (231)
.++.+++.-|- |++++ |+ ++.+.||.+...
T Consensus 135 ~~p~ciaCC~~tG~LlV-g~-~~~l~lf~l~~~ 165 (215)
T PF14761_consen 135 EPPLCIACCPVTGNLLV-GC-GNKLVLFTLKYQ 165 (215)
T ss_pred CCCCEEEecCCCCCEEE-Ec-CCEEEEEEEEEE
Confidence 35677888884 66554 44 456889987544
No 449
>KOG4460|consensus
Probab=58.35 E-value=1.4e+02 Score=26.79 Aligned_cols=33 Identities=9% Similarity=0.218 Sum_probs=26.2
Q ss_pred CeeEEEEcCCC---CEEEEeeCCCcEEEEeCCCCCe
Q psy6442 167 PIHCVKFSPDG---ELYASGSEDGTLRLWQTNVGKT 199 (231)
Q Consensus 167 ~V~~v~~spd~---~~laS~s~d~~v~iwd~~~~~~ 199 (231)
.+..++|+|+. ..|.--+.|++|||||......
T Consensus 167 tl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~te 202 (741)
T KOG4460|consen 167 TLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTE 202 (741)
T ss_pred eeeeccccCCccCCceEEEEecCcEEEEEecCCcch
Confidence 46678999974 5777788899999999876653
No 450
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=57.81 E-value=1e+02 Score=25.05 Aligned_cols=57 Identities=19% Similarity=0.327 Sum_probs=36.5
Q ss_pred CeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCC---eee-eeeccC-CcccCCCCCCc--ccccc
Q psy6442 167 PIHCVKFSPDGELYASGSEDGTLRLWQTNVGK---TYG-LWKCIE-GGLNNSLGLDS--SGHLN 223 (231)
Q Consensus 167 ~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~---~~~-~~~~~~-~~~~~~~~~~~--~~~~~ 223 (231)
....++++++|.++.+--..+.|..|+....- .+. +-+.-. =.++..+.++. +|.+|
T Consensus 187 ~s~g~~~D~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~ 250 (287)
T PF03022_consen 187 QSDGMAIDPNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLW 250 (287)
T ss_dssp SECEEEEETTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EE
T ss_pred CCceEEECCCCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEE
Confidence 56778999999999999999999999987621 122 223211 23455566666 55554
No 451
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=56.63 E-value=37 Score=29.09 Aligned_cols=40 Identities=25% Similarity=0.293 Sum_probs=29.8
Q ss_pred ccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeee
Q psy6442 161 FKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYG 201 (231)
Q Consensus 161 ~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~ 201 (231)
++...++|++++.|.-| ++|.|.++|++.|.|++....+.
T Consensus 82 ~~~~~g~vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~ 121 (395)
T PF08596_consen 82 LDAKQGPVTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIY 121 (395)
T ss_dssp E---S-SEEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEE
T ss_pred eeccCCcEeEEecCCCc-EEEEEecCCcEEEEECCCCeEEe
Confidence 34457899999998666 89999999999999997776553
No 452
>KOG3630|consensus
Probab=56.35 E-value=1.1e+02 Score=30.08 Aligned_cols=128 Identities=11% Similarity=0.049 Sum_probs=70.3
Q ss_pred EEEEeCCCCEEEEeCCCCCceEEE------------EeCCcceeEEEccCCCE--EEEEcCCeEEEEECCCcce-EEeee
Q psy6442 55 LISCAEDKTVRLWDVSASAEVQKL------------EFGAVPNSLEISRDGTT--ITVTHGSCVTFLDANSLEL-IKEHK 119 (231)
Q Consensus 55 l~s~s~D~ti~iwd~~~~~~~~~~------------~~~~~~~~v~~~~~~~~--~~~~~~~~i~~~d~~~~~~-~~~~~ 119 (231)
++..+.+-.|..+|+++....... +....+.++.|.|.-.. +....+..|++..+.-... ...
T Consensus 117 v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s-- 194 (1405)
T KOG3630|consen 117 VVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTS-- 194 (1405)
T ss_pred EEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhhhhhhcc--
Confidence 455566677889998754332211 11123456677775432 2223344555544322111 112
Q ss_pred ccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc--ceeeeccC-CCCCeeEEEEcCCCCEEEEee
Q psy6442 120 VPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG--AEIESFKG-HFGPIHCVKFSPDGELYASGS 184 (231)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~--~~~~~~~~-h~~~V~~v~~spd~~~laS~s 184 (231)
.+......++.+++.+..++.|-..|++.-|..... ..++..+- ....|.+|.|-....+++.-+
T Consensus 195 ~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl~v~Wl~t~eflvvy~ 262 (1405)
T KOG3630|consen 195 FPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEENYRVLSVTWLSTQEFLVVYG 262 (1405)
T ss_pred cCcccceeeEEeccccceeeEecCCCeEEEeecccceeecccCCCcCCCcceeEEEEecceeEEEEec
Confidence 222222334445999999999999999888765322 22222221 146799999988777766554
No 453
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=56.31 E-value=1.2e+02 Score=25.40 Aligned_cols=149 Identities=18% Similarity=0.110 Sum_probs=74.6
Q ss_pred CCEEEEEeCCCCEEEEeCCCCCceEEEEeCC--cceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccce--eEEE
Q psy6442 52 NTRLISCAEDKTVRLWDVSASAEVQKLEFGA--VPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQ--VHSA 127 (231)
Q Consensus 52 ~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~ 127 (231)
+..|+.++.++.+...|.++++.+-...... ....-....++.....+.++.+.-.+..+.........+.+ ....
T Consensus 111 ~G~i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~ 190 (370)
T COG1520 111 DGKIYVGSWDGKLYALDASTGTLVWSRNVGGSPYYASPPVVGDGTVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIY 190 (370)
T ss_pred CCeEEEecccceEEEEECCCCcEEEEEecCCCeEEecCcEEcCcEEEEecCCCeEEEEEccCCcEEEEEecCCccccccc
Confidence 4458888899988888988887766655444 11111122233222222456666666666665554433221 1000
Q ss_pred EEEecCCCCEEEEecC--CCeEEEEeCCCcceeeecc-----CCCCCeeEEEEcCC-----CCEEEEeeCCCcEEEEeCC
Q psy6442 128 SLLLNSERPIFVCGGE--DLKMYKFDYSTGAEIESFK-----GHFGPIHCVKFSPD-----GELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 128 ~~~~~~~~~~~~~g~~--d~~i~~~d~~~~~~~~~~~-----~h~~~V~~v~~spd-----~~~laS~s~d~~v~iwd~~ 195 (231)
.. .......+..+.. ++.++-+|..+|......+ +..... ....... +.-+..++.++.+.-.|..
T Consensus 191 ~~-~~~~~~~vy~~~~~~~~~~~a~~~~~G~~~w~~~~~~~~~~~~~~-~~~~~~~~~v~v~~~~~~~~~~g~~~~l~~~ 268 (370)
T COG1520 191 GS-PAIASGTVYVGSDGYDGILYALNAEDGTLKWSQKVSQTIGRTAIS-TTPAVDGGPVYVDGGVYAGSYGGKLLCLDAD 268 (370)
T ss_pred cC-ceeecceEEEecCCCcceEEEEEccCCcEeeeeeeecccCccccc-ccccccCceEEECCcEEEEecCCeEEEEEcC
Confidence 00 0011222344444 5577778887877665532 111110 0111111 1233556667778888888
Q ss_pred CCCeeee
Q psy6442 196 VGKTYGL 202 (231)
Q Consensus 196 ~~~~~~~ 202 (231)
+|+....
T Consensus 269 ~G~~~W~ 275 (370)
T COG1520 269 TGELIWS 275 (370)
T ss_pred CCceEEE
Confidence 8875533
No 454
>PHA02790 Kelch-like protein; Provisional
Probab=56.11 E-value=1.4e+02 Score=26.19 Aligned_cols=59 Identities=15% Similarity=0.086 Sum_probs=30.5
Q ss_pred CCCEEEEecCCCeEEEEeCCCcc--eeeeccCCCCCeeEEEEcCCCCEEEEeeCC-----CcEEEEeCCCC
Q psy6442 134 ERPIFVCGGEDLKMYKFDYSTGA--EIESFKGHFGPIHCVKFSPDGELYASGSED-----GTLRLWQTNVG 197 (231)
Q Consensus 134 ~~~~~~~g~~d~~i~~~d~~~~~--~~~~~~~h~~~V~~v~~spd~~~laS~s~d-----~~v~iwd~~~~ 197 (231)
++.+.+.|+ ....||..+.+ .+..+....... +++ --++++++.|+.+ .+|..||..+.
T Consensus 407 ~~~IYv~GG---~~e~ydp~~~~W~~~~~m~~~r~~~-~~~-v~~~~IYviGG~~~~~~~~~ve~Yd~~~~ 472 (480)
T PHA02790 407 GRRLFLVGR---NAEFYCESSNTWTLIDDPIYPRDNP-ELI-IVDNKLLLIGGFYRGSYIDTIEVYNNRTY 472 (480)
T ss_pred CCEEEEECC---ceEEecCCCCcEeEcCCCCCCcccc-EEE-EECCEEEEECCcCCCcccceEEEEECCCC
Confidence 455566664 34567765442 223232111111 222 2366788888754 45778888764
No 455
>KOG2377|consensus
Probab=55.95 E-value=1e+02 Score=27.09 Aligned_cols=32 Identities=25% Similarity=0.318 Sum_probs=29.2
Q ss_pred CCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCC
Q psy6442 164 HFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 164 h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~ 195 (231)
..++|.++.||||.+.||.--.+.+|-+++..
T Consensus 65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~ 96 (657)
T KOG2377|consen 65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFI 96 (657)
T ss_pred CCCceeEEEeccCcceEEEEecCceEEEEecC
Confidence 45799999999999999999999999999983
No 456
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=55.13 E-value=1.4e+02 Score=25.85 Aligned_cols=61 Identities=15% Similarity=0.161 Sum_probs=39.4
Q ss_pred EEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEE---EcCCCCEEEEeeCCCcEEEEeCCCCCee
Q psy6442 137 IFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVK---FSPDGELYASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 137 ~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~---~spd~~~laS~s~d~~v~iwd~~~~~~~ 200 (231)
.++.++.++++.+|. ..++.........|| ++. |..-..++++-+.+|.+.+-=+.+....
T Consensus 302 ~llV~t~t~~LlVy~--d~~L~WsA~l~~~PV-al~v~~~~~~~G~IV~Ls~~G~L~v~YLGTdPs~ 365 (418)
T PF14727_consen 302 NLLVGTHTGTLLVYE--DTTLVWSAQLPHVPV-ALSVANFNGLKGLIVSLSDEGQLSVSYLGTDPSL 365 (418)
T ss_pred EEEEEecCCeEEEEe--CCeEEEecCCCCCCE-EEEecccCCCCceEEEEcCCCcEEEEEeCCCCcc
Confidence 477888899998885 334444433333343 333 3333458899999999998877776543
No 457
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=53.96 E-value=1e+02 Score=23.94 Aligned_cols=44 Identities=16% Similarity=0.268 Sum_probs=33.0
Q ss_pred cCCCeEEEEeCC--CcceeeeccCCCCCeeEEEEcCCCCEEEEeeCC
Q psy6442 142 GEDLKMYKFDYS--TGAEIESFKGHFGPIHCVKFSPDGELYASGSED 186 (231)
Q Consensus 142 ~~d~~i~~~d~~--~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d 186 (231)
.....|..|++. ..+.+.+|. --+.|..+.++..|.+|+|--++
T Consensus 35 ~~g~~Vev~~l~~~~~~~~~~F~-Tv~~V~~l~y~~~GDYlvTlE~k 80 (215)
T PF14761_consen 35 ASGCKVEVYDLEQEECPLLCTFS-TVGRVLQLVYSEAGDYLVTLEEK 80 (215)
T ss_pred cCCCEEEEEEcccCCCceeEEEc-chhheeEEEeccccceEEEEEee
Confidence 455678899986 334556665 34789999999999999998653
No 458
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=53.24 E-value=1.8 Score=20.61 Aligned_cols=18 Identities=17% Similarity=0.211 Sum_probs=14.3
Q ss_pred CCCCCccccccceeeeec
Q psy6442 213 SLGLDSSGHLNNVHEVIA 230 (231)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~ 230 (231)
..-|+++|+..||.|-|+
T Consensus 5 ~t~FSp~Grl~QVEYA~~ 22 (23)
T PF10584_consen 5 ITTFSPDGRLFQVEYAMK 22 (23)
T ss_dssp TTSBBTTSSBHHHHHHHH
T ss_pred ceeECCCCeEEeeEeeec
Confidence 346889999999988764
No 459
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=52.02 E-value=30 Score=17.17 Aligned_cols=25 Identities=20% Similarity=0.355 Sum_probs=18.3
Q ss_pred CeeEEEEcCCCCEEEEeeCCCcEEEEe
Q psy6442 167 PIHCVKFSPDGELYASGSEDGTLRLWQ 193 (231)
Q Consensus 167 ~V~~v~~spd~~~laS~s~d~~v~iwd 193 (231)
.|.+++.++. +++.+..-+.+|||.
T Consensus 3 ~i~aia~g~~--~vavaTS~~~lRifs 27 (27)
T PF12341_consen 3 EIEAIAAGDS--WVAVATSAGYLRIFS 27 (27)
T ss_pred eEEEEEccCC--EEEEEeCCCeEEecC
Confidence 4666666655 778888888899874
No 460
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=51.16 E-value=27 Score=20.63 Aligned_cols=19 Identities=21% Similarity=0.345 Sum_probs=16.1
Q ss_pred CeeEEEEcCCCCEEEEeeC
Q psy6442 167 PIHCVKFSPDGELYASGSE 185 (231)
Q Consensus 167 ~V~~v~~spd~~~laS~s~ 185 (231)
.+.++++.|||++|+++..
T Consensus 2 ~~~~~~~q~DGkIlv~G~~ 20 (55)
T TIGR02608 2 RAYAVAVQSDGKILVAGYV 20 (55)
T ss_pred ceEEEEECCCCcEEEEEEe
Confidence 4678999999999999864
No 461
>KOG3616|consensus
Probab=50.83 E-value=21 Score=33.07 Aligned_cols=44 Identities=11% Similarity=0.204 Sum_probs=35.2
Q ss_pred CCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCc
Q psy6442 166 GPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGG 209 (231)
Q Consensus 166 ~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~ 209 (231)
..++++.-+|.++-++++..||+|++|+....+.-..|+...|.
T Consensus 15 e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~~~~p~ 58 (1636)
T KOG3616|consen 15 EFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICEEAKPK 58 (1636)
T ss_pred ceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhhhhcCCc
Confidence 45677888899999999999999999998777765566554444
No 462
>PHA02790 Kelch-like protein; Provisional
Probab=50.81 E-value=1.7e+02 Score=25.64 Aligned_cols=65 Identities=14% Similarity=0.120 Sum_probs=33.3
Q ss_pred CCCEEEEecCCC---eEEEEeCCCcc--eeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccC
Q psy6442 134 ERPIFVCGGEDL---KMYKFDYSTGA--EIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIE 207 (231)
Q Consensus 134 ~~~~~~~g~~d~---~i~~~d~~~~~--~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~ 207 (231)
++.+.+.|+.+. .+..||..+.+ ....+.-.... ..+..-++.+.+.|+ .+.+||..+ ..|+.+.
T Consensus 362 ~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~--~~~~~~~~~IYv~GG---~~e~ydp~~----~~W~~~~ 431 (480)
T PHA02790 362 NNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYK--SCALVFGRRLFLVGR---NAEFYCESS----NTWTLID 431 (480)
T ss_pred CCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCcccc--ceEEEECCEEEEECC---ceEEecCCC----CcEeEcC
Confidence 566677776543 35667765532 11112111111 122234567777764 477888865 3666543
No 463
>PRK13684 Ycf48-like protein; Provisional
Probab=49.89 E-value=1.5e+02 Score=24.62 Aligned_cols=110 Identities=15% Similarity=0.161 Sum_probs=56.6
Q ss_pred CcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeecc---ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCccee
Q psy6442 82 AVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVP---AQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEI 158 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~ 158 (231)
..++.+.+.+++..++++..+.+.+-.............+ .......+.+.+++..++.| .++.+.. ....++.-
T Consensus 215 ~~l~~i~~~~~g~~~~vg~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~G-~~G~v~~-S~d~G~tW 292 (334)
T PRK13684 215 RRLQSMGFQPDGNLWMLARGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGEIWAGG-GNGTLLV-SKDGGKTW 292 (334)
T ss_pred ccceeeeEcCCCCEEEEecCCEEEEccCCCCCccccccCCccccccceeeEEEcCCCCEEEEc-CCCeEEE-eCCCCCCC
Confidence 4577888999998887777776654323332222222222 11111223345566655554 5565543 22222221
Q ss_pred eec---cCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeC
Q psy6442 159 ESF---KGHFGPIHCVKFSPDGELYASGSEDGTLRLWQT 194 (231)
Q Consensus 159 ~~~---~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~ 194 (231)
... .+-......+.|..++..++ .+..|.|--|+-
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~G~il~~~~ 330 (334)
T PRK13684 293 EKDPVGEEVPSNFYKIVFLDPEKGFV-LGQRGVLLRYVG 330 (334)
T ss_pred eECCcCCCCCcceEEEEEeCCCceEE-ECCCceEEEecC
Confidence 111 11223577788877777666 455677766653
No 464
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=48.81 E-value=1.5e+02 Score=24.29 Aligned_cols=120 Identities=11% Similarity=0.070 Sum_probs=65.1
Q ss_pred CcceeEEEccCCCEEEEEcCCeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcc--eee
Q psy6442 82 AVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA--EIE 159 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~--~~~ 159 (231)
...+...|.+.|..-++...+.--..|..+ ..++.+..+......-+...+++.+-.+.-.+..|-..|..++. .+.
T Consensus 148 ~nlet~vfD~~G~lWFt~q~G~yGrLdPa~-~~i~vfpaPqG~gpyGi~atpdGsvwyaslagnaiaridp~~~~aev~p 226 (353)
T COG4257 148 ANLETAVFDPWGNLWFTGQIGAYGRLDPAR-NVISVFPAPQGGGPYGICATPDGSVWYASLAGNAIARIDPFAGHAEVVP 226 (353)
T ss_pred CcccceeeCCCccEEEeeccccceecCccc-CceeeeccCCCCCCcceEECCCCcEEEEeccccceEEcccccCCcceec
Confidence 345677888888876664432222222211 22334443332222222236777776665555556666655442 122
Q ss_pred eccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeee
Q psy6442 160 SFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLW 203 (231)
Q Consensus 160 ~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~ 203 (231)
.-+.-+..-+.+.-+|.|+..+|....+.+.-||..+.. +..|
T Consensus 227 ~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~s-W~ey 269 (353)
T COG4257 227 QPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTS-WIEY 269 (353)
T ss_pred CCCcccccccccccCccCcEEEeccCCceeeEeCccccc-ceee
Confidence 222222334556677888888888888888888876643 4444
No 465
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=47.17 E-value=2e+02 Score=25.20 Aligned_cols=146 Identities=13% Similarity=0.183 Sum_probs=71.0
Q ss_pred CEEEEEe-CCCCEEEEeCCCC----CceEEEEeC--------CcceeEEEccCCCEEEEE---c----CCeEEEEECCCc
Q psy6442 53 TRLISCA-EDKTVRLWDVSAS----AEVQKLEFG--------AVPNSLEISRDGTTITVT---H----GSCVTFLDANSL 112 (231)
Q Consensus 53 ~~l~s~s-~D~ti~iwd~~~~----~~~~~~~~~--------~~~~~v~~~~~~~~~~~~---~----~~~i~~~d~~~~ 112 (231)
++|+..+ ..+.|.|.|+.+. +..+.++-. ..+-.+-.-|+|..++.. . -+.+.++|..+.
T Consensus 88 r~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~tf 167 (461)
T PF05694_consen 88 RYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGETF 167 (461)
T ss_dssp -EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TTT-
T ss_pred CcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCccc
Confidence 4566555 6688999998743 223333310 223445566788655432 1 146778888877
Q ss_pred ceEEeeecc--ceeEEEEEEecCCCCEEEEecC--------------------CCeEEEEeCCCcceeeecc-CCC-CCe
Q psy6442 113 ELIKEHKVP--AQVHSASLLLNSERPIFVCGGE--------------------DLKMYKFDYSTGAEIESFK-GHF-GPI 168 (231)
Q Consensus 113 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~--------------------d~~i~~~d~~~~~~~~~~~-~h~-~~V 168 (231)
+.....+.+ ......-+...+....+++..+ ..++.+||+.+.+.++++. +.. ..+
T Consensus 168 ~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~p 247 (461)
T PF05694_consen 168 EVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMP 247 (461)
T ss_dssp -EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEE
T ss_pred cccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCCce
Confidence 776665442 2334455666777777776542 3579999999999988875 222 346
Q ss_pred eEEEEcCCCC---EEEEeeCCCcEEEE-eCCCCC
Q psy6442 169 HCVKFSPDGE---LYASGSEDGTLRLW-QTNVGK 198 (231)
Q Consensus 169 ~~v~~spd~~---~laS~s~d~~v~iw-d~~~~~ 198 (231)
..|.|..+.. =++.+.-..+|-.| ....++
T Consensus 248 LEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~ 281 (461)
T PF05694_consen 248 LEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGE 281 (461)
T ss_dssp EEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTE
T ss_pred EEEEecCCCCccceEEEEeccceEEEEEEcCCCC
Confidence 7888888743 35666666666544 434443
No 466
>KOG4441|consensus
Probab=45.55 E-value=2.3e+02 Score=25.62 Aligned_cols=148 Identities=16% Similarity=0.199 Sum_probs=70.5
Q ss_pred CCCEEEEEeCCCC-----EEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcC--------CeEEEEECCCcceEEe
Q psy6442 51 NNTRLISCAEDKT-----VRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHG--------SCVTFLDANSLELIKE 117 (231)
Q Consensus 51 ~~~~l~s~s~D~t-----i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--------~~i~~~d~~~~~~~~~ 117 (231)
++...+.||.||. +-.||..+.+-...-.........+...-+..+++..+ ..+..+|..+..-...
T Consensus 380 ~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~ 459 (571)
T KOG4441|consen 380 DGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLI 459 (571)
T ss_pred CCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeec
Confidence 6778888888864 66677765543211111112222222222233333211 3456677665443322
Q ss_pred eeccc--eeEEEEEEecCCCCEEEEecCCC-----eEEEEeCCCcc--eeeeccCCCCCeeEEEEcC-CCCEEEEeeCCC
Q psy6442 118 HKVPA--QVHSASLLLNSERPIFVCGGEDL-----KMYKFDYSTGA--EIESFKGHFGPIHCVKFSP-DGELYASGSEDG 187 (231)
Q Consensus 118 ~~~~~--~~~~~~~~~~~~~~~~~~g~~d~-----~i~~~d~~~~~--~~~~~~~h~~~V~~v~~sp-d~~~laS~s~d~ 187 (231)
..... ...... .-++.+.+.|+.++ ++..+|..+.+ .+..+... ...+.... ++.+.+.|+.|+
T Consensus 460 ~~M~~~R~~~g~a---~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~---rs~~g~~~~~~~ly~vGG~~~ 533 (571)
T KOG4441|consen 460 APMNTRRSGFGVA---VLNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSP---RSAVGVVVLGGKLYAVGGFDG 533 (571)
T ss_pred CCcccccccceEE---EECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccc---cccccEEEECCEEEEEecccC
Confidence 22211 111111 22566777777665 36667776543 22222212 22222222 456778888766
Q ss_pred c-----EEEEeCCCCCeeeeeeccCC
Q psy6442 188 T-----LRLWQTNVGKTYGLWKCIEG 208 (231)
Q Consensus 188 ~-----v~iwd~~~~~~~~~~~~~~~ 208 (231)
. |..||..+ ..|+...+
T Consensus 534 ~~~l~~ve~ydp~~----d~W~~~~~ 555 (571)
T KOG4441|consen 534 NNNLNTVECYDPET----DTWTEVTE 555 (571)
T ss_pred ccccceeEEcCCCC----CceeeCCC
Confidence 4 55666554 35665444
No 467
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=44.70 E-value=1.8e+02 Score=23.98 Aligned_cols=134 Identities=16% Similarity=0.174 Sum_probs=59.9
Q ss_pred CCEEEEEeCCCCE-EEEeCCCCCceEEE-EeCCcceeEEEccCCCEEEEEcCCeEEEEE-CCCcceEEeeecc---ceeE
Q psy6442 52 NTRLISCAEDKTV-RLWDVSASAEVQKL-EFGAVPNSLEISRDGTTITVTHGSCVTFLD-ANSLELIKEHKVP---AQVH 125 (231)
Q Consensus 52 ~~~l~s~s~D~ti-~iwd~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~i~~~d-~~~~~~~~~~~~~---~~~~ 125 (231)
+.+++.+ ..|.+ .-||.....-...- .....+.++.+.|++...++..++.+.+-+ ....+.......+ ....
T Consensus 156 G~~vavs-~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~ 234 (302)
T PF14870_consen 156 GRYVAVS-SRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLARGGQIQFSDDPDDGETWSEPIIPIKTNGYG 234 (302)
T ss_dssp S-EEEEE-TTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEETTTEEEEEE-TTEEEEE---B-TTSS--S-
T ss_pred CcEEEEE-CcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEeCCcEEEEccCCCCccccccccCCcccCcee
Confidence 3444444 44444 45765432222221 224578899999999887788888888776 3333332221122 1222
Q ss_pred EEEEEecCCCCEEEEecCCCeEEEEeCCCcce---eeeccCCCCCeeEEEEcCCCCEEEEeeCCCcE
Q psy6442 126 SASLLLNSERPIFVCGGEDLKMYKFDYSTGAE---IESFKGHFGPIHCVKFSPDGELYASGSEDGTL 189 (231)
Q Consensus 126 ~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~---~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v 189 (231)
.+.+.+.++....++|+. +.++. ....|+. ......-.+.+..+.|.++.+-++ -+.+|.|
T Consensus 235 ~ld~a~~~~~~~wa~gg~-G~l~~-S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~-lG~~G~l 298 (302)
T PF14870_consen 235 ILDLAYRPPNEIWAVGGS-GTLLV-STDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFV-LGQDGVL 298 (302)
T ss_dssp EEEEEESSSS-EEEEEST-T-EEE-ESSTTSS-EE-GGGTTSSS---EEEEEETTEEEE-E-STTEE
T ss_pred eEEEEecCCCCEEEEeCC-ccEEE-eCCCCccceECccccCCCCceEEEEEcCCCceEE-ECCCcEE
Confidence 344455777777776554 44433 2222221 111222344577888877655555 4456655
No 468
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=44.08 E-value=89 Score=20.34 Aligned_cols=30 Identities=13% Similarity=0.289 Sum_probs=22.6
Q ss_pred CCeeEEEEcCCCCEE-EEeeCCCcEEEEeCC
Q psy6442 166 GPIHCVKFSPDGELY-ASGSEDGTLRLWQTN 195 (231)
Q Consensus 166 ~~V~~v~~spd~~~l-aS~s~d~~v~iwd~~ 195 (231)
...+.+.++|++++| ++....+.|+++..+
T Consensus 54 ~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~ 84 (86)
T PF01731_consen 54 SFANGIAISPDKKYLYVASSLAHSIHVYKRH 84 (86)
T ss_pred CCCceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence 346789999998765 444577889999864
No 469
>PF09826 Beta_propel: Beta propeller domain; InterPro: IPR019198 This entry consists of predicted secreted proteins containing a C-terminal beta-propeller domain distantly related to WD-40 repeats.
Probab=43.82 E-value=2.4e+02 Score=25.25 Aligned_cols=78 Identities=21% Similarity=0.191 Sum_probs=62.5
Q ss_pred CeEEEEeCCCcceeeeccC--CCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCC---CCeeeeeeccCCcccCCCCCCcc
Q psy6442 145 LKMYKFDYSTGAEIESFKG--HFGPIHCVKFSPDGELYASGSEDGTLRLWQTNV---GKTYGLWKCIEGGLNNSLGLDSS 219 (231)
Q Consensus 145 ~~i~~~d~~~~~~~~~~~~--h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~ 219 (231)
..+++.| +..+.+..+++ -...|.++.|--|.-+++|--+-.=+.+.|+.+ .+....++ -++.|+++=+.++
T Consensus 304 N~lyVLD-~~L~~vG~l~~la~gE~IysvRF~Gd~~Y~VTFrqvDPLfviDLsdP~~P~vlGeLK--IPGfS~YLHP~~e 380 (521)
T PF09826_consen 304 NNLYVLD-EDLKIVGSLEGLAPGERIYSVRFMGDRAYLVTFRQVDPLFVIDLSDPANPKVLGELK--IPGFSDYLHPYDE 380 (521)
T ss_pred EEEEEEC-CCCcEeEEccccCCCceEEEEEEeCCeEEEEEEeecCceEEEECCCCCCCceeeEEE--CccchhceeECCC
Confidence 3577777 45555555542 346799999999999999998877788888866 55678888 5999999999999
Q ss_pred ccccce
Q psy6442 220 GHLNNV 225 (231)
Q Consensus 220 ~~~~~~ 225 (231)
+|++|+
T Consensus 381 ~~LlGi 386 (521)
T PF09826_consen 381 NHLLGI 386 (521)
T ss_pred CeEEEE
Confidence 999987
No 470
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=42.82 E-value=1.9e+02 Score=23.68 Aligned_cols=53 Identities=17% Similarity=0.257 Sum_probs=25.8
Q ss_pred CCCEEEEecCCC----eEEEEeCCCcc--eeeeccCCCCCe---eEE-EEcCCCCEEEEeeCC
Q psy6442 134 ERPIFVCGGEDL----KMYKFDYSTGA--EIESFKGHFGPI---HCV-KFSPDGELYASGSED 186 (231)
Q Consensus 134 ~~~~~~~g~~d~----~i~~~d~~~~~--~~~~~~~h~~~V---~~v-~~spd~~~laS~s~d 186 (231)
++.+.+.|+.+. .+..||..+.+ .+..+..-..+. ... ....++.+++.|+.+
T Consensus 171 ~~~iYv~GG~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~ 233 (323)
T TIGR03548 171 QNELYVFGGGSNIAYTDGYKYSPKKNQWQKVADPTTDSEPISLLGAASIKINESLLLCIGGFN 233 (323)
T ss_pred CCEEEEEcCCCCccccceEEEecCCCeeEECCCCCCCCCceeccceeEEEECCCEEEEECCcC
Confidence 456677776553 35677876543 222221000111 111 122356788888866
No 471
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=42.42 E-value=2.3e+02 Score=24.98 Aligned_cols=70 Identities=20% Similarity=0.346 Sum_probs=35.7
Q ss_pred cCCCCEEEEecCCCeEEEEeCCCcceeee--ccCCC-CCeeEEEEcCCCCEEEEeeC-------------CCcEEEEeCC
Q psy6442 132 NSERPIFVCGGEDLKMYKFDYSTGAEIES--FKGHF-GPIHCVKFSPDGELYASGSE-------------DGTLRLWQTN 195 (231)
Q Consensus 132 ~~~~~~~~~g~~d~~i~~~d~~~~~~~~~--~~~h~-~~V~~v~~spd~~~laS~s~-------------d~~v~iwd~~ 195 (231)
.+++.++.... ..++.+|+ .|+.+.. +.+.. ..=+++..-|+|++|+.+.. ...|...| .
T Consensus 156 l~nG~ll~~~~--~~~~e~D~-~G~v~~~~~l~~~~~~~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~ 231 (477)
T PF05935_consen 156 LPNGNLLIGSG--NRLYEIDL-LGKVIWEYDLPGGYYDFHHDIDELPNGNLLILASETKYVDEDKDVDTVEDVIVEVD-P 231 (477)
T ss_dssp -TTS-EEEEEB--TEEEEE-T-T--EEEEEE--TTEE-B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE--T
T ss_pred cCCCCEEEecC--CceEEEcC-CCCEEEeeecCCcccccccccEECCCCCEEEEEeecccccCCCCccEecCEEEEEC-C
Confidence 56666655444 66777776 3444333 22211 11256778899998887772 23367777 8
Q ss_pred CCCeeeeeec
Q psy6442 196 VGKTYGLWKC 205 (231)
Q Consensus 196 ~~~~~~~~~~ 205 (231)
+|+....|..
T Consensus 232 tG~vv~~wd~ 241 (477)
T PF05935_consen 232 TGEVVWEWDF 241 (477)
T ss_dssp TS-EEEEEEG
T ss_pred CCCEEEEEeh
Confidence 9999999965
No 472
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=42.33 E-value=48 Score=17.57 Aligned_cols=20 Identities=15% Similarity=0.164 Sum_probs=15.2
Q ss_pred CCCEEEEEeCCCCEEEEeCC
Q psy6442 51 NNTRLISCAEDKTVRLWDVS 70 (231)
Q Consensus 51 ~~~~l~s~s~D~ti~iwd~~ 70 (231)
.+..|+.++.|+++...|..
T Consensus 20 ~~g~vyv~~~dg~l~ald~~ 39 (40)
T PF13570_consen 20 AGGRVYVGTGDGNLYALDAA 39 (40)
T ss_dssp CTSEEEEE-TTSEEEEEETT
T ss_pred ECCEEEEEcCCCEEEEEeCC
Confidence 35678888999999988875
No 473
>PRK13684 Ycf48-like protein; Provisional
Probab=41.48 E-value=2.1e+02 Score=23.80 Aligned_cols=113 Identities=17% Similarity=0.152 Sum_probs=55.6
Q ss_pred CcceeEEEccCCCEEEEEcCCeEEEE-ECCCcceEEeeecc--ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCccee
Q psy6442 82 AVPNSLEISRDGTTITVTHGSCVTFL-DANSLELIKEHKVP--AQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEI 158 (231)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~~~i~~~-d~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~ 158 (231)
..+..+.+.|++..+++...+.+..- +. ..+.......+ ..+..+ ...+++..++.+ ..+.++.-....+..-
T Consensus 173 g~~~~i~~~~~g~~v~~g~~G~i~~s~~~-gg~tW~~~~~~~~~~l~~i--~~~~~g~~~~vg-~~G~~~~~s~d~G~sW 248 (334)
T PRK13684 173 GVVRNLRRSPDGKYVAVSSRGNFYSTWEP-GQTAWTPHQRNSSRRLQSM--GFQPDGNLWMLA-RGGQIRFNDPDDLESW 248 (334)
T ss_pred ceEEEEEECCCCeEEEEeCCceEEEEcCC-CCCeEEEeeCCCcccceee--eEcCCCCEEEEe-cCCEEEEccCCCCCcc
Confidence 34677888888877777666644332 21 11112222222 222322 235666665554 4566543222222211
Q ss_pred eeccC----CCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCee
Q psy6442 159 ESFKG----HFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTY 200 (231)
Q Consensus 159 ~~~~~----h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~ 200 (231)
..... -...+.++.+.|++..++ ++.+|.|. .....|+.+
T Consensus 249 ~~~~~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v~-~S~d~G~tW 292 (334)
T PRK13684 249 SKPIIPEITNGYGYLDLAYRTPGEIWA-GGGNGTLL-VSKDGGKTW 292 (334)
T ss_pred ccccCCccccccceeeEEEcCCCCEEE-EcCCCeEE-EeCCCCCCC
Confidence 11111 123478899999887665 44566553 445556544
No 474
>KOG4659|consensus
Probab=41.36 E-value=4e+02 Score=27.11 Aligned_cols=48 Identities=15% Similarity=0.252 Sum_probs=35.6
Q ss_pred eEEEEcCCCCEEEEeeCCCcE-EEEeCCCCCeeeeeeccCCcccCCCCC
Q psy6442 169 HCVKFSPDGELYASGSEDGTL-RLWQTNVGKTYGLWKCIEGGLNNSLGL 216 (231)
Q Consensus 169 ~~v~~spd~~~laS~s~d~~v-~iwd~~~~~~~~~~~~~~~~~~~~~~~ 216 (231)
.+++++++|.++++-++.+.| +|=.+.+.-.+..+.++...++|.+..
T Consensus 596 r~Iavg~~G~lyvaEsD~rriNrvr~~~tdg~i~ilaGa~S~C~C~~~~ 644 (1899)
T KOG4659|consen 596 RDIAVGTDGALYVAESDGRRINRVRKLSTDGTISILAGAKSPCSCDVAA 644 (1899)
T ss_pred hceeecCCceEEEEeccchhhhheEEeccCceEEEecCCCCCCCccccc
Confidence 678899999888877776666 566666666777777777777776655
No 475
>KOG1916|consensus
Probab=41.08 E-value=72 Score=30.47 Aligned_cols=82 Identities=15% Similarity=0.280 Sum_probs=49.9
Q ss_pred ecCCCCEEEEecCCCeEEEEeCC-----CcceeeeccCCC-CCeeEEEEcCCC---------CEEEEee-CCCcEEEEeC
Q psy6442 131 LNSERPIFVCGGEDLKMYKFDYS-----TGAEIESFKGHF-GPIHCVKFSPDG---------ELYASGS-EDGTLRLWQT 194 (231)
Q Consensus 131 ~~~~~~~~~~g~~d~~i~~~d~~-----~~~~~~~~~~h~-~~V~~v~~spd~---------~~laS~s-~d~~v~iwd~ 194 (231)
.+|+|..++....||.++.|... ...+++..+-|. .+-.|.-|..+- .++++++ .++.+++|..
T Consensus 243 lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~ 322 (1283)
T KOG1916|consen 243 LSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAE 322 (1283)
T ss_pred eCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeec
Confidence 48999999999999877776542 334455556665 333232244431 2444444 4666888874
Q ss_pred CCCCeeeeeeccCCcccCCCCCCc
Q psy6442 195 NVGKTYGLWKCIEGGLNNSLGLDS 218 (231)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~ 218 (231)
..|+|.-..+.-.+.++.
T Consensus 323 ------a~w~Cll~~~~d~v~iV~ 340 (1283)
T KOG1916|consen 323 ------APWQCLLDKLIDGVQIVG 340 (1283)
T ss_pred ------cchhhhhhhcccceEeec
Confidence 467887666555555555
No 476
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=40.91 E-value=2.4e+02 Score=24.31 Aligned_cols=107 Identities=17% Similarity=0.187 Sum_probs=54.6
Q ss_pred CCcceeEEEccCCCEEEEEcCCeEEEEECCCc-c---eEEeeecc-ceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc
Q psy6442 81 GAVPNSLEISRDGTTITVTHGSCVTFLDANSL-E---LIKEHKVP-AQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG 155 (231)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~-~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~ 155 (231)
...+..+.+.+++..++++..+.+..-+.... . .......+ .......+.+.+++..+++| ..|.++... ..+
T Consensus 280 ~~~l~~v~~~~dg~l~l~g~~G~l~~S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s~-D~G 357 (398)
T PLN00033 280 ARRIQNMGWRADGGLWLLTRGGGLYVSKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAAG-GSGILLRST-DGG 357 (398)
T ss_pred ccceeeeeEcCCCCEEEEeCCceEEEecCCCCcccccceeecccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEeC-CCC
Confidence 34567888999999888877766544321111 0 11211111 11112223335566655554 556554432 222
Q ss_pred ce---eeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEE
Q psy6442 156 AE---IESFKGHFGPIHCVKFSPDGELYASGSEDGTLR 190 (231)
Q Consensus 156 ~~---~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~ 190 (231)
+. ...-..-......+.|.++++.++++. +|.|-
T Consensus 358 ~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G~-~G~il 394 (398)
T PLN00033 358 KSWKRDKGADNIAANLYSVKFFDDKKGFVLGN-DGVLL 394 (398)
T ss_pred cceeEccccCCCCcceeEEEEcCCCceEEEeC-CcEEE
Confidence 22 111122345678999988877776554 56553
No 477
>TIGR03054 photo_alph_chp1 putative photosynthetic complex assembly protein. In twenty or so anoxygenic photosynthetic alpha-Proteobacteria known so far, a gene for a member of this protein family is present and is found in the vicinity of puhA, which encodes a component of the photosynthetic reaction center, and other genes associated with photosynthesis. This protein family is suggested, consequently, as a probable assembly factor for the photosynthetic reaction center, but its seems its actual function has not yet been demonstrated.
Probab=40.12 E-value=1.4e+02 Score=21.39 Aligned_cols=66 Identities=14% Similarity=0.164 Sum_probs=46.7
Q ss_pred EEEecCCCeEEEEeCCCcceeeecc-CCCCCeeE-----------EEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeee
Q psy6442 138 FVCGGEDLKMYKFDYSTGAEIESFK-GHFGPIHC-----------VKFSPDGELYASGSEDGTLRLWQTNVGKTYGLW 203 (231)
Q Consensus 138 ~~~g~~d~~i~~~d~~~~~~~~~~~-~h~~~V~~-----------v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~ 203 (231)
...+..++.+.+++..+++.+..+. ++.+-|.. -....+..+-..--+||.+.|-|..+|+.+.+-
T Consensus 44 ~f~d~~~G~v~V~~~~~G~~va~~~~g~~GFvrgvlR~l~R~R~~~gv~~~~Pf~L~r~~dGrltL~Dp~Tg~~i~L~ 121 (135)
T TIGR03054 44 VFEDRPDGAVAVVETPDGRLVAILEPGQNGFVRVMLRGLARARARAGVAAEPPFRLTRYDNGRLTLTDPATGWSIELN 121 (135)
T ss_pred EEecCCCCeEEEEECCCCCEEEEecCCCCchhhHhHHHHHHHHHHcCCCCCCCEEEEEEeCCcEEEEcCCCCcEEEEe
Confidence 3445677778888888888777763 33343321 125566778888999999999999999887553
No 478
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=39.75 E-value=1.5e+02 Score=26.00 Aligned_cols=55 Identities=20% Similarity=0.317 Sum_probs=35.0
Q ss_pred CCEEEEecCCCeEEEEeCCCc------ceeeeccCCCCCeeEEEEcCCC-CEEEEeeCCCcEE
Q psy6442 135 RPIFVCGGEDLKMYKFDYSTG------AEIESFKGHFGPIHCVKFSPDG-ELYASGSEDGTLR 190 (231)
Q Consensus 135 ~~~~~~g~~d~~i~~~d~~~~------~~~~~~~~h~~~V~~v~~spd~-~~laS~s~d~~v~ 190 (231)
+.+|+.+-....|+...+... +....+.. .+.|++|+.+||| .+.+.....|.+.
T Consensus 369 g~llv~~L~~~~l~r~~l~~~~~~v~~~~~~~~~~-~~RiRdv~~~pDg~~iy~~td~~g~~~ 430 (454)
T TIGR03606 369 NSLLIPSLKRGVIYRIKLDPDYSTVYGDAVPMFKT-NNRYRDVIASPDGNVLYVATDNFGNVQ 430 (454)
T ss_pred CCEEEEEcCCCeEEEEEecCCcceecceeEEeecC-CCeeEEEEECCCCCEEEEEEcCCCccc
Confidence 455566555667777766433 11222333 5799999999997 6666666777653
No 479
>cd01272 FE65_N Fe65 Phosphotyrosine-binding (PTB) domain. Fe65 Phosphotyrosine-binding (PTB) domain. Fe65 is an amyloid beta A4 precursor protein-binding. It contains an N-terminal WW domain followed by two PTB domains. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=39.66 E-value=36 Score=24.08 Aligned_cols=29 Identities=24% Similarity=0.251 Sum_probs=20.2
Q ss_pred cCCCceeeeccCCCeEeeeecccccEEEE
Q psy6442 3 VDGKPMLRQGDTGDWIGTFEGHKGCVWGV 31 (231)
Q Consensus 3 ~d~~~~~~~~~~g~~i~~l~gH~~~V~~~ 31 (231)
.+|+++|-|+.+...|+++.-|+-.||.+
T Consensus 60 ~~g~lkLiDP~~~s~LhSqPI~~IRvwGv 88 (138)
T cd01272 60 DEGALKLIDPENLTVLHSQPIHTIRVWGV 88 (138)
T ss_pred cCCceEeeCCCCCceEEeeeeeEEEEEEe
Confidence 35777777777777777777666666655
No 480
>KOG1520|consensus
Probab=38.99 E-value=58 Score=27.58 Aligned_cols=83 Identities=19% Similarity=0.268 Sum_probs=47.8
Q ss_pred EecCCCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeC--CCcEEEEeCCCCC-eeeeeeccCCcccCCCCC
Q psy6442 140 CGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSE--DGTLRLWQTNVGK-TYGLWKCIEGGLNNSLGL 216 (231)
Q Consensus 140 ~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~--d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~ 216 (231)
.+..+|++..||..+.. .+.+..--.-.+.++.|||+.+++.|-. -+.-|.|=-.... +.+.+-.=-++++--|-.
T Consensus 194 ~g~~~GRl~~YD~~tK~-~~VLld~L~F~NGlaLS~d~sfvl~~Et~~~ri~rywi~g~k~gt~EvFa~~LPG~PDNIR~ 272 (376)
T KOG1520|consen 194 EGDPTGRLFRYDPSTKV-TKVLLDGLYFPNGLALSPDGSFVLVAETTTARIKRYWIKGPKAGTSEVFAEGLPGYPDNIRR 272 (376)
T ss_pred cCCCccceEEecCcccc-hhhhhhcccccccccCCCCCCEEEEEeeccceeeeeEecCCccCchhhHhhcCCCCCcceeE
Confidence 44567888899876543 3333333345678999999998877742 3444677422211 001121112445555667
Q ss_pred Ccccccc
Q psy6442 217 DSSGHLN 223 (231)
Q Consensus 217 ~~~~~~~ 223 (231)
+++||+|
T Consensus 273 ~~~G~fW 279 (376)
T KOG1520|consen 273 DSTGHFW 279 (376)
T ss_pred CCCCCEE
Confidence 7888877
No 481
>KOG2727|consensus
Probab=38.17 E-value=22 Score=33.58 Aligned_cols=49 Identities=22% Similarity=0.239 Sum_probs=43.3
Q ss_pred EEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeeccCCcccCCCCCCc
Q psy6442 170 CVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDS 218 (231)
Q Consensus 170 ~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (231)
.++.||+|++.|....=+.|-+-|+..+..+-.|++|-.+.|..+.+..
T Consensus 326 ~lslSP~gtlAAVTD~lgRVlLlDta~~ivvr~wKGYRDAsc~fv~vke 374 (1244)
T KOG2727|consen 326 KLSLSPSGTLAAVTDSLGRVLLLDTAALIVVRLWKGYRDASCVFVEVKE 374 (1244)
T ss_pred eeeeCCCccEEEEecccCcEEEEehhhhhHHHHhcccccceeEEEEccc
Confidence 4789999999998888899999999999999999999999888887444
No 482
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=36.78 E-value=1.6e+02 Score=21.11 Aligned_cols=62 Identities=16% Similarity=0.182 Sum_probs=35.9
Q ss_pred ccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEE
Q psy6442 26 GCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEI 89 (231)
Q Consensus 26 ~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~ 89 (231)
..|..+.++..=..+++|..+. ......|+.|+ ..++..||+.....+...+.+.-++++.+
T Consensus 39 ~~i~~LNin~~italaaG~l~~-~~~~D~LliGt-~t~llaYDV~~N~d~Fyke~~DGvn~i~~ 100 (136)
T PF14781_consen 39 SDISFLNINQEITALAAGRLKP-DDGRDCLLIGT-QTSLLAYDVENNSDLFYKEVPDGVNAIVI 100 (136)
T ss_pred CceeEEECCCceEEEEEEecCC-CCCcCEEEEec-cceEEEEEcccCchhhhhhCccceeEEEE
Confidence 3455555555444444444332 12234455554 56799999988776666566666666654
No 483
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=35.95 E-value=2.2e+02 Score=22.87 Aligned_cols=56 Identities=14% Similarity=0.172 Sum_probs=35.2
Q ss_pred CCEEEEecCCCeEEEEeCCCcceeeeccCCCCCeeEEE----EcCCCCEEEEeeCCCcEEE
Q psy6442 135 RPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVK----FSPDGELYASGSEDGTLRL 191 (231)
Q Consensus 135 ~~~~~~g~~d~~i~~~d~~~~~~~~~~~~h~~~V~~v~----~spd~~~laS~s~d~~v~i 191 (231)
-.+++.|.+.+.|++.|...-..+..+.--.-|+ .+. |..-+-.++.+++||.|.+
T Consensus 195 ~scLViGTE~~~i~iLd~~af~il~~~~lpsvPv-~i~~~G~~devdyRI~Va~Rdg~iy~ 254 (257)
T PF14779_consen 195 VSCLVIGTESGEIYILDPQAFTILKQVQLPSVPV-FISVSGQYDEVDYRIVVACRDGKIYT 254 (257)
T ss_pred cceEEEEecCCeEEEECchhheeEEEEecCCCce-EEEEEeeeeccceEEEEEeCCCEEEE
Confidence 3468899999999999987666666554333333 222 2212235666778887754
No 484
>KOG1520|consensus
Probab=35.91 E-value=87 Score=26.55 Aligned_cols=72 Identities=17% Similarity=0.214 Sum_probs=41.1
Q ss_pred EEEECCCCceeEecccc-ccccCCCE-EEEEeCCCCEEEEeCCCCCceEEEEeCCcceeEEEccCCCEEEEEcC
Q psy6442 30 GVDINKDASKAASGAAD-FQAKNNTR-LISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHG 101 (231)
Q Consensus 30 ~~~~~~~~~~~~s~~~d-~~~~~~~~-l~s~s~D~ti~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 101 (231)
.++..++|....|-+.+ +..++=-. +..+..+|.+.-||..++.....+.--.-++.++.+||+..++++..
T Consensus 165 ~ldI~~~g~vyFTDSSsk~~~rd~~~a~l~g~~~GRl~~YD~~tK~~~VLld~L~F~NGlaLS~d~sfvl~~Et 238 (376)
T KOG1520|consen 165 DLDIDPEGVVYFTDSSSKYDRRDFVFAALEGDPTGRLFRYDPSTKVTKVLLDGLYFPNGLALSPDGSFVLVAET 238 (376)
T ss_pred ceeEcCCCeEEEeccccccchhheEEeeecCCCccceEEecCcccchhhhhhcccccccccCCCCCCEEEEEee
Confidence 34555655544444332 22222111 33444567788888877654333332345788999999998877643
No 485
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=35.82 E-value=2.4e+02 Score=22.94 Aligned_cols=102 Identities=16% Similarity=0.195 Sum_probs=56.6
Q ss_pred CCceeeeccCCCeEeeeecccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEE-----E
Q psy6442 5 GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKL-----E 79 (231)
Q Consensus 5 ~~~~~~~~~~g~~i~~l~gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~-----~ 79 (231)
..|-+|+..+.++.+--.+=+|.|..+.|..+.+.++.|. ++..+ .....+..||.....-...- .
T Consensus 16 ~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~--ft~~~-------~~~~~la~yd~~~~~w~~~~~~~s~~ 86 (281)
T PF12768_consen 16 PGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGN--FTLNG-------TNSSNLATYDFKNQTWSSLGGGSSNS 86 (281)
T ss_pred CEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEe--eEECC-------CCceeEEEEecCCCeeeecCCccccc
Confidence 3466888887888776667789999999987666666553 22111 13445666776654321111 1
Q ss_pred eCCcceeEEEc-cCCCEEEEE-----cCCeEEEEECCCcceE
Q psy6442 80 FGAVPNSLEIS-RDGTTITVT-----HGSCVTFLDANSLELI 115 (231)
Q Consensus 80 ~~~~~~~v~~~-~~~~~~~~~-----~~~~i~~~d~~~~~~~ 115 (231)
++.++..+.+. .|...+.++ ....+..||......+
T Consensus 87 ipgpv~a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~~i 128 (281)
T PF12768_consen 87 IPGPVTALTFISNDGSNFWVAGRSANGSTFLMKYDGSSWSSI 128 (281)
T ss_pred CCCcEEEEEeeccCCceEEEeceecCCCceEEEEcCCceEec
Confidence 23445555543 233334321 2245677776554443
No 486
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.00 E-value=2.7e+02 Score=22.97 Aligned_cols=158 Identities=10% Similarity=0.102 Sum_probs=83.4
Q ss_pred cccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEEEeC--CcceeEEEccCCCEEEEEc
Q psy6442 23 GHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFG--AVPNSLEISRDGTTITVTH 100 (231)
Q Consensus 23 gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~ 100 (231)
|-...|.++.|+|+.+. |.+...-..-.+|=...|..++++.+. ..+..+++..+++++++..
T Consensus 83 g~~~nvS~LTynp~~rt---------------LFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dE 147 (316)
T COG3204 83 GETANVSSLTYNPDTRT---------------LFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDE 147 (316)
T ss_pred cccccccceeeCCCcce---------------EEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEeh
Confidence 33445888888887543 444545556666666778888888765 3466778887777766543
Q ss_pred -CCeEEEEECCCc--ce-EE--eeecc---c-eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcc---eeeeccCCC--
Q psy6442 101 -GSCVTFLDANSL--EL-IK--EHKVP---A-QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA---EIESFKGHF-- 165 (231)
Q Consensus 101 -~~~i~~~d~~~~--~~-~~--~~~~~---~-~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~---~~~~~~~h~-- 165 (231)
+..+.++..... .. .. .+... . ......+.+++....+..+-+..-+.+|....+. ..+....++
T Consensus 148 R~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~ 227 (316)
T COG3204 148 RDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTAD 227 (316)
T ss_pred hcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccc
Confidence 344444332221 11 11 11111 1 1111223346666666666555444444332211 112222222
Q ss_pred -----CCeeEEEEcCC-CCEEEEeeCCCcEEEEeCC
Q psy6442 166 -----GPIHCVKFSPD-GELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 166 -----~~V~~v~~spd-~~~laS~s~d~~v~iwd~~ 195 (231)
..|.++.|.+. +++|+=..+++.+--.|..
T Consensus 228 ~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~ 263 (316)
T COG3204 228 RDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDLS 263 (316)
T ss_pred cceEeeccccceecCCCCcEEEEecCCceEEEEecC
Confidence 24677888874 5666666677777666653
No 487
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=33.65 E-value=1.1e+02 Score=25.02 Aligned_cols=38 Identities=21% Similarity=0.200 Sum_probs=32.8
Q ss_pred eeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeeeeec
Q psy6442 168 IHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKC 205 (231)
Q Consensus 168 V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~~~~ 205 (231)
+++|...++|.+|+|+-.-.+|.+.+.++|+....+.+
T Consensus 146 iNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG 183 (299)
T PF14269_consen 146 INSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGG 183 (299)
T ss_pred eeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCC
Confidence 77888889999999999999999999999987765543
No 488
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=33.60 E-value=3.1e+02 Score=23.58 Aligned_cols=113 Identities=16% Similarity=0.157 Sum_probs=55.6
Q ss_pred eeEEEccCCCEEEEEcCCeEE-EEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcc-----ee
Q psy6442 85 NSLEISRDGTTITVTHGSCVT-FLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA-----EI 158 (231)
Q Consensus 85 ~~v~~~~~~~~~~~~~~~~i~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~-----~~ 158 (231)
..+...+++..++++..+.+. -+|.... ....+..+.......+.+.+++.+++.+ ..+.+..- ...+. ..
T Consensus 242 ~~v~~~~dG~~~~vg~~G~~~~s~d~G~~-~W~~~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l~~S-~d~G~~~~~~~f 318 (398)
T PLN00033 242 STVNRSPDGDYVAVSSRGNFYLTWEPGQP-YWQPHNRASARRIQNMGWRADGGLWLLT-RGGGLYVS-KGTGLTEEDFDF 318 (398)
T ss_pred eeEEEcCCCCEEEEECCccEEEecCCCCc-ceEEecCCCccceeeeeEcCCCCEEEEe-CCceEEEe-cCCCCcccccce
Confidence 345667888777777655433 2332211 1122222222112223336677766655 45554332 22222 22
Q ss_pred eeccC--CCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCCeeee
Q psy6442 159 ESFKG--HFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGL 202 (231)
Q Consensus 159 ~~~~~--h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~~~~~ 202 (231)
..... -...+.++.|.+++..+++ +..|.+... ...|+.++.
T Consensus 319 ~~~~~~~~~~~l~~v~~~~d~~~~a~-G~~G~v~~s-~D~G~tW~~ 362 (398)
T PLN00033 319 EEADIKSRGFGILDVGYRSKKEAWAA-GGSGILLRS-TDGGKSWKR 362 (398)
T ss_pred eecccCCCCcceEEEEEcCCCcEEEE-ECCCcEEEe-CCCCcceeE
Confidence 22221 1235889999998876664 456755554 456665544
No 489
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=33.58 E-value=3.3e+02 Score=23.94 Aligned_cols=36 Identities=17% Similarity=0.316 Sum_probs=25.9
Q ss_pred eeEEEEcC-CCCEEEEeeCCCcEEEEeCCCCCeeeee
Q psy6442 168 IHCVKFSP-DGELYASGSEDGTLRLWQTNVGKTYGLW 203 (231)
Q Consensus 168 V~~v~~sp-d~~~laS~s~d~~v~iwd~~~~~~~~~~ 203 (231)
++++.+.| ++.+++|.-.-..|...|.++++....+
T Consensus 273 ~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wil 309 (477)
T PF05935_consen 273 INSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWIL 309 (477)
T ss_dssp EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEE
T ss_pred cCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEe
Confidence 68999999 6667777776778999998898876443
No 490
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=32.37 E-value=3e+02 Score=23.07 Aligned_cols=19 Identities=26% Similarity=0.571 Sum_probs=15.2
Q ss_pred CCeeEEEEcCCCCEEEEee
Q psy6442 166 GPIHCVKFSPDGELYASGS 184 (231)
Q Consensus 166 ~~V~~v~~spd~~~laS~s 184 (231)
...+.++|.|||.+.++-+
T Consensus 124 ~~~~~l~~gpDG~LYv~~G 142 (367)
T TIGR02604 124 HSLNSLAWGPDGWLYFNHG 142 (367)
T ss_pred ccccCceECCCCCEEEecc
Confidence 4578899999998877665
No 491
>KOG2109|consensus
Probab=32.12 E-value=44 Score=30.48 Aligned_cols=45 Identities=29% Similarity=0.512 Sum_probs=34.8
Q ss_pred EEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCC-cEEEEe
Q psy6442 149 KFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDG-TLRLWQ 193 (231)
Q Consensus 149 ~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~-~v~iwd 193 (231)
.-|..+...+..|+.|+.++..++|.+.+.++++++-.| .|.++.
T Consensus 299 vkdf~S~a~i~QfkAhkspiSaLcfdqsgsllViasi~g~nVnvfR 344 (788)
T KOG2109|consen 299 VKDFDSFADIRQFKAHKSPISALCFDQSGSLLVIASITGRNVNVFR 344 (788)
T ss_pred eecccchhhhhheeeecCcccccccccCceEEEEEeeccceeeeEE
Confidence 345555566788999999999999999999999999766 244443
No 492
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=29.57 E-value=2.3e+02 Score=23.56 Aligned_cols=64 Identities=20% Similarity=0.372 Sum_probs=40.7
Q ss_pred CCceeeeccCCCeEeeee--cccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCCCceEEE
Q psy6442 5 GKPMLRQGDTGDWIGTFE--GHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKL 78 (231)
Q Consensus 5 ~~~~~~~~~~g~~i~~l~--gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~~~~~~~ 78 (231)
|-|-+++. .|++++.+. +.-..=|.+...|. ++-...+..|+-=--||+|..+|..+++.+-.+
T Consensus 222 G~VdvFd~-~G~l~~r~as~g~LNaPWG~a~APa---------~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L 287 (336)
T TIGR03118 222 GYVNVFTL-NGQLLRRVASSGRLNAPWGLAIAPE---------SFGSLSGALLVGNFGDGTINAYDPQSGAQLGQL 287 (336)
T ss_pred ceEEEEcC-CCcEEEEeccCCcccCCceeeeChh---------hhCCCCCCeEEeecCCceeEEecCCCCceeeee
Confidence 45667773 478877763 22233466666553 222234667777667999999999888766544
No 493
>KOG1897|consensus
Probab=29.37 E-value=5.5e+02 Score=25.12 Aligned_cols=87 Identities=18% Similarity=0.305 Sum_probs=47.9
Q ss_pred CeEEEEECCCcceEEeeeccceeEEEEEEecCCCCEEEEecCCCeEEEEeCCCcceeeec-cCCCCCeeEEEEcCCC---
Q psy6442 102 SCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESF-KGHFGPIHCVKFSPDG--- 177 (231)
Q Consensus 102 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~~~~~~~-~~h~~~V~~v~~spd~--- 177 (231)
..|++++.. ........+.+...... ..+...++.++.++.+...+...+.+.... ..-...|.|+.++|-|
T Consensus 470 ~~iRl~ss~--~~~~~W~~p~~~ti~~~--~~n~sqVvvA~~~~~l~y~~i~~~~l~e~~~~~~e~evaCLDisp~~d~~ 545 (1096)
T KOG1897|consen 470 NSIRLVSSA--GLRSEWRPPGKITIGVV--SANASQVVVAGGGLALFYLEIEDGGLREVSHKEFEYEVACLDISPLGDAP 545 (1096)
T ss_pred ccEEEEcch--hhhhcccCCCceEEEEE--eecceEEEEecCccEEEEEEeeccceeeeeeheecceeEEEecccCCCCC
Confidence 456666544 22333344444443333 334445666666677766666544422111 1224679999999852
Q ss_pred ---CEEEEeeCCCcEEEE
Q psy6442 178 ---ELYASGSEDGTLRLW 192 (231)
Q Consensus 178 ---~~laS~s~d~~v~iw 192 (231)
++++.|..+..+.+-
T Consensus 546 ~~s~~~aVG~Ws~~~~~l 563 (1096)
T KOG1897|consen 546 NKSRLLAVGLWSDISMIL 563 (1096)
T ss_pred CcceEEEEEeecceEEEE
Confidence 278888877776543
No 494
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=27.64 E-value=1.1e+02 Score=16.32 Aligned_cols=22 Identities=18% Similarity=0.466 Sum_probs=18.3
Q ss_pred CCeeEEEEcCCCCEEEEeeCCC
Q psy6442 166 GPIHCVKFSPDGELYASGSEDG 187 (231)
Q Consensus 166 ~~V~~v~~spd~~~laS~s~d~ 187 (231)
....+|++.++|+.+++|..++
T Consensus 13 ~~~~~IavD~~GNiYv~G~T~~ 34 (38)
T PF06739_consen 13 DYGNGIAVDSNGNIYVTGYTNG 34 (38)
T ss_pred eeEEEEEECCCCCEEEEEeecC
Confidence 3478899999999999988765
No 495
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=26.98 E-value=5.9e+02 Score=24.68 Aligned_cols=74 Identities=9% Similarity=0.087 Sum_probs=42.3
Q ss_pred eEEEEECCCcceEEe-eeccceeEEEEEEecCCCCEEEE-ecCC-----CeEEEEeCCC-cceeeeccCCCCCeeEEEEc
Q psy6442 103 CVTFLDANSLELIKE-HKVPAQVHSASLLLNSERPIFVC-GGED-----LKMYKFDYST-GAEIESFKGHFGPIHCVKFS 174 (231)
Q Consensus 103 ~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-g~~d-----~~i~~~d~~~-~~~~~~~~~h~~~V~~v~~s 174 (231)
.+.+.|......... +....++ +...++|+++.++. .+.. ..|++-++.+ +.-+-.++-..+.|..-...
T Consensus 330 ~L~~~D~dG~n~~~ve~~~~~~i--~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aaiprwrv~ 407 (912)
T TIGR02171 330 NLAYIDYTKGASRAVEIEDTISV--YHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAAIPRWRVL 407 (912)
T ss_pred eEEEEecCCCCceEEEecCCCce--ecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccccccceEec
Confidence 555555444332221 2222222 33445899999887 3332 2488888864 33344555567778777788
Q ss_pred CCCC
Q psy6442 175 PDGE 178 (231)
Q Consensus 175 pd~~ 178 (231)
++|.
T Consensus 408 e~gd 411 (912)
T TIGR02171 408 ENGD 411 (912)
T ss_pred CCCC
Confidence 8776
No 496
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=26.80 E-value=5.4e+02 Score=24.20 Aligned_cols=38 Identities=21% Similarity=0.289 Sum_probs=28.2
Q ss_pred cccccEEEEEECCCCceeEeccccccccCCCEEEEEeCCCCEEEEeCCCC
Q psy6442 23 GHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSAS 72 (231)
Q Consensus 23 gH~~~V~~~~~~~~~~~~~s~~~d~~~~~~~~l~s~s~D~ti~iwd~~~~ 72 (231)
.+...|..+.|+|.+- ++..|+.=..|+++|+||+...
T Consensus 144 ~~~~~i~qv~WhP~s~------------~~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 144 NSSLEIKQVRWHPWSE------------SDSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred CCCceEEEEEEcCCCC------------CCCeEEEEecCCEEEEEecCCC
Confidence 4456788888888642 3566777778999999999754
No 497
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=26.08 E-value=3.7e+02 Score=22.10 Aligned_cols=117 Identities=13% Similarity=0.184 Sum_probs=75.1
Q ss_pred CCcceeEEEccCCCEEEEE-cCCeEEEEECCCcceEEeeeccc--eeEEEEEEecCCCCEEEEecCCCeEEEEeCCCc-c
Q psy6442 81 GAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVPA--QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTG-A 156 (231)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~d~~i~~~d~~~~-~ 156 (231)
+..++.++..|+|..-+.+ .++.|...|...... ..+..+. +...-.+..++.+..-++....+.++.||.... -
T Consensus 188 G~gpyGi~atpdGsvwyaslagnaiaridp~~~~a-ev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~sW 266 (353)
T COG4257 188 GGGPYGICATPDGSVWYASLAGNAIARIDPFAGHA-EVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTSW 266 (353)
T ss_pred CCCCcceEECCCCcEEEEeccccceEEcccccCCc-ceecCCCcccccccccccCccCcEEEeccCCceeeEeCcccccc
Confidence 3567889999999877665 456777777655421 1111111 111122334677777777666778888887543 2
Q ss_pred eeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCCCCC
Q psy6442 157 EIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198 (231)
Q Consensus 157 ~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~~~~ 198 (231)
....+.+.+..-.++.....++...+-...+.|.=||.++.+
T Consensus 267 ~eypLPgs~arpys~rVD~~grVW~sea~agai~rfdpeta~ 308 (353)
T COG4257 267 IEYPLPGSKARPYSMRVDRHGRVWLSEADAGAIGRFDPETAR 308 (353)
T ss_pred eeeeCCCCCCCcceeeeccCCcEEeeccccCceeecCcccce
Confidence 345566777777788888888877777777777777766543
No 498
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=24.66 E-value=2.2e+02 Score=27.03 Aligned_cols=62 Identities=8% Similarity=0.099 Sum_probs=32.7
Q ss_pred CCEEEEEeCCC-----CEEEEeC---CCCCceEEEEeCCcceeEEEccCCCEEEEEcCCeEEEEECCCcc
Q psy6442 52 NTRLISCAEDK-----TVRLWDV---SASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANSLE 113 (231)
Q Consensus 52 ~~~l~s~s~D~-----ti~iwd~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~d~~~~~ 113 (231)
|..++|-+.|| .|+++.. +.|..-..+........++|......++++.++.+.+|-..+..
T Consensus 258 gS~~ati~td~~~~S~~ViFfErNGLrHGef~lr~~~dEk~~~~~wn~~s~vlav~~~n~~~lwttkNyh 327 (1243)
T COG5290 258 GSKYATIGTDGCSTSESVIFFERNGLRHGEFDLRVGCDEKAFLENWNLLSTVLAVAEGNLLKLWTTKNYH 327 (1243)
T ss_pred CceeeeeccCCCCCcceEEEEccCCcccCCccccCCchhhhhhhhhhHHHHHHHHhhcceEEEEEccceE
Confidence 34455555443 3555532 23332222223345566677666555666667778888765543
No 499
>KOG2280|consensus
Probab=24.28 E-value=1.2e+02 Score=28.30 Aligned_cols=50 Identities=18% Similarity=0.246 Sum_probs=35.9
Q ss_pred CCeEEEEeCCCcceeeeccCCCCCeeEEEEcCCCCEEEEeeCCCcEEEEeCC
Q psy6442 144 DLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195 (231)
Q Consensus 144 d~~i~~~d~~~~~~~~~~~~h~~~V~~v~~spd~~~laS~s~d~~v~iwd~~ 195 (231)
.-.|++|+. +|.++.++.-..+++-.+.|+.+.. |+.-..||++++|+..
T Consensus 63 ~~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~ee-LI~v~k~g~v~Vy~~~ 112 (829)
T KOG2280|consen 63 RPYIRIFNI-SGQLLGRILWKHGELIGMGWSDDEE-LICVQKDGTVHVYGLL 112 (829)
T ss_pred ceeEEEEec-cccchHHHHhcCCCeeeecccCCce-EEEEeccceEEEeecc
Confidence 345777775 5666666554444788899998865 4557889999999973
No 500
>PF09826 Beta_propel: Beta propeller domain; InterPro: IPR019198 This entry consists of predicted secreted proteins containing a C-terminal beta-propeller domain distantly related to WD-40 repeats.
Probab=23.06 E-value=5.5e+02 Score=23.01 Aligned_cols=18 Identities=39% Similarity=0.560 Sum_probs=9.6
Q ss_pred CCCEEEEEcCCeEEEEEC
Q psy6442 92 DGTTITVTHGSCVTFLDA 109 (231)
Q Consensus 92 ~~~~~~~~~~~~i~~~d~ 109 (231)
||+.+++..++.+.++|.
T Consensus 21 DG~yIY~v~~~~l~Iida 38 (521)
T PF09826_consen 21 DGEYIYVVSGGRLYIIDA 38 (521)
T ss_pred CCCEEEEEeCCEEEEEEC
Confidence 455555545555555555
Done!