RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6442
(231 letters)
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 85.6 bits (210), Expect = 3e-20
Identities = 29/140 (20%), Positives = 50/140 (35%), Gaps = 3/140 (2%)
Query: 56 ISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVTH--GSCVTFLDANSL 112
+S A D + +LWDV Q + N++ +G +C F
Sbjct: 200 VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259
Query: 113 ELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVK 172
EL+ S+ + + + G +D +D GH + C+
Sbjct: 260 ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLG 319
Query: 173 FSPDGELYASGSEDGTLRLW 192
+ DG A+GS D L++W
Sbjct: 320 VTDDGMAVATGSWDSFLKIW 339
Score = 55.5 bits (132), Expect = 8e-10
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 136 PIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195
+FV G D +D G ++F GH I+ + F P+G +A+GS+D T RL+
Sbjct: 197 RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256
Query: 196 VGKTYGLWKC 205
+ +
Sbjct: 257 ADQELMTYSH 266
Score = 46.7 bits (109), Expect = 8e-07
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 160 SFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198
+ +GH I+ + + D L S S+DG L +W +
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN 88
Score = 43.6 bits (101), Expect = 9e-06
Identities = 9/65 (13%), Positives = 19/65 (29%), Gaps = 15/65 (23%)
Query: 4 DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKT 63
D + D G GH V + + D + + + D
Sbjct: 291 DFNCNVWDALKADRAGVLAGHDNRVSCLGVTDD---------------GMAVATGSWDSF 335
Query: 64 VRLWD 68
+++W+
Sbjct: 336 LKIWN 340
Score = 43.2 bits (100), Expect = 1e-05
Identities = 34/207 (16%), Positives = 71/207 (34%), Gaps = 20/207 (9%)
Query: 20 TFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE 79
T GH ++ + D + L+S ++D + +WD + +V +
Sbjct: 50 TLRGHLAKIYAMHWGTD---------------SRLLVSASQDGKLIIWDSYTTNKVHAIP 94
Query: 80 FGAVP-NSLEISRDGTTITVTHGSCVTF---LDANSLELIKEHKVPAQVHSASLLLNSER 135
+ + + G + + L + ++ S +
Sbjct: 95 LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD 154
Query: 136 PIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195
V D +D TG + +F GH G + + +PD L+ SG+ D + +LW
Sbjct: 155 NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 214
Query: 196 VGKTYGLWKCIEGGLNNSLGLDSSGHL 222
G + E + N++ +G+
Sbjct: 215 EGMCRQTFTGHESDI-NAICFFPNGNA 240
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 78.2 bits (191), Expect = 9e-18
Identities = 32/200 (16%), Positives = 66/200 (33%), Gaps = 8/200 (4%)
Query: 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK----NNTRLI 56
D + + TG + TF GH+ V V N+D + AS + D +
Sbjct: 119 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 178
Query: 57 SCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGS---CVTFLDANSLE 113
+ + + +S + E S + GS + D ++
Sbjct: 179 AELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 238
Query: 114 LIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKF 173
+ +L +S + +D + +DY +++ H + + F
Sbjct: 239 CLMTLVGHDNWVR-GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDF 297
Query: 174 SPDGELYASGSEDGTLRLWQ 193
+GS D T+++W+
Sbjct: 298 HKTAPYVVTGSVDQTVKVWE 317
Score = 65.1 bits (157), Expect = 3e-13
Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 16/177 (9%)
Query: 20 TFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE 79
GH+ V V + + ++S +ED T+++WD + L+
Sbjct: 12 ALSGHRSPVTRVIFHPV---------------FSVMVSASEDATIKVWDYETGDFERTLK 56
Query: 80 FGAVP-NSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIF 138
+ G + L + +S+ +
Sbjct: 57 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHI 116
Query: 139 VCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195
V D + ++ TG +++F GH + V+ + DG L AS S D T+R+W
Sbjct: 117 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 173
Score = 64.4 bits (155), Expect = 7e-13
Identities = 43/256 (16%), Positives = 82/256 (32%), Gaps = 48/256 (18%)
Query: 4 DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDA-------------------------- 37
D + +TGD+ T +GH V + +
Sbjct: 38 DATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM 97
Query: 38 -SKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTT 95
+ ++ N ++S + DKT+++W+V V+ + ++DGT
Sbjct: 98 HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 157
Query: 96 I-TVTHGSCVTFLDANSLELIKEHK-------------------VPAQVHSASLLLNSER 135
I + ++ V + E E + + S +
Sbjct: 158 IASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPG 217
Query: 136 PIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195
P + G D + +D STG + + GH + V F G+ S ++D TLR+W
Sbjct: 218 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 277
Query: 196 VGKTYGLWKCIEGGLN 211
+ E +
Sbjct: 278 NKRCMKTLNAHEHFVT 293
Score = 55.5 bits (132), Expect = 9e-10
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 154 TGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198
E + GH P+ V F P + S SED T+++W G
Sbjct: 6 RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 50
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 69.1 bits (167), Expect = 2e-14
Identities = 36/201 (17%), Positives = 70/201 (34%), Gaps = 26/201 (12%)
Query: 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAE 60
D + +T + T +GH V+ + ++S +
Sbjct: 153 GAYDFMVKVWDPETETCLHTLQGHTNRVY-----------------SLQFDGIHVVSGSL 195
Query: 61 DKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKV 120
D ++R+WDV + L S +D ++ S V D + + ++ +
Sbjct: 196 DTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQG 255
Query: 121 PAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFK-----GHFGPIHCVKFSP 175
P + SA L + + +D + +D TG I + G G + ++ S
Sbjct: 256 PNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASN 315
Query: 176 DGELYASGSEDGT----LRLW 192
+ A GS +GT L +
Sbjct: 316 TKLVCAVGSRNGTEETKLLVL 336
Score = 45.2 bits (105), Expect = 2e-06
Identities = 34/225 (15%), Positives = 68/225 (30%), Gaps = 28/225 (12%)
Query: 4 DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDA-----------------------SKA 40
D + TG + T GH G VW + +
Sbjct: 36 DNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYG 95
Query: 41 ASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH 100
+ + R++S + D T+R+WD+ + L ++ +
Sbjct: 96 HTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAY 155
Query: 101 GSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIES 160
V D + + + + + V G D + +D TG I +
Sbjct: 156 DFMVKVWDPETETCLHTLQGHTNRVYSL---QFDGIHVVSGSLDTSIRVWDVETGNCIHT 212
Query: 161 FKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKC 205
GH ++ + + SG+ D T+++W G+ +
Sbjct: 213 LTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQG 255
Score = 44.8 bits (104), Expect = 3e-06
Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 151 DYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198
+ KGH + G SGS+D TL++W GK
Sbjct: 2 RRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGK 48
Score = 44.8 bits (104), Expect = 3e-06
Identities = 36/227 (15%), Positives = 63/227 (27%), Gaps = 57/227 (25%)
Query: 20 TFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE 79
+GH V F R++S ++D T+++W ++ L
Sbjct: 11 VLKGHDDHVIT-------------CLQF---CGNRIVSGSDDNTLKVWSAVTGKCLRTLV 54
Query: 80 --FGAVPNSLEISRDGTT------------------------------------ITVTHG 101
G V S ++ + V G
Sbjct: 55 GHTGGV-WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSG 113
Query: 102 SCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESF 161
S L +E + V +A + + V G D + +D T + +
Sbjct: 114 SRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 173
Query: 162 KGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEG 208
+GH DG SGS D ++R+W G +
Sbjct: 174 QGH--TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS 218
Score = 44.8 bits (104), Expect = 3e-06
Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 4/149 (2%)
Query: 51 NNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDAN 110
+ R++S A D V++WD + L+ ++ + + + D
Sbjct: 146 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVE 205
Query: 111 SLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPI-H 169
+ I + S + + I V G D + +D TG +++ +G
Sbjct: 206 TGNCIHTLTGHQSLTSG---MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 262
Query: 170 CVKFSPDGELYASGSEDGTLRLWQTNVGK 198
+ + S+DGT++LW G+
Sbjct: 263 VTCLQFNKNFVITSSDDGTVKLWDLKTGE 291
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 69.4 bits (168), Expect = 2e-14
Identities = 29/173 (16%), Positives = 62/173 (35%), Gaps = 26/173 (15%)
Query: 47 FQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVP--------NSLEISRDGTTI-T 97
+ + + + D+ VR+WD V++L+ S+ +RDG ++ +
Sbjct: 212 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVS 271
Query: 98 VTHGSCVTFLDANSLELIKEHKVPAQVHSA-----------SLLLNSERPIFVCGGEDLK 146
+ V + + + K P S+ + G +D
Sbjct: 272 GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG 331
Query: 147 MYKFDYSTGAEIESFKGHFGPIHCV------KFSPDGELYASGSEDGTLRLWQ 193
+ +D +G + +GH + V P+ ++A+GS D R+W+
Sbjct: 332 VLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384
Score = 47.1 bits (110), Expect = 5e-07
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Query: 132 NSERPIFVCGGEDLKMYKFDYSTG-------AEIESFKGHFGPIHCVKFSPDGELYASGS 184
+ G D + +D TG +E ES GH ++ V F+ DG+ SGS
Sbjct: 214 PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS 273
Query: 185 EDGTLRLWQTNVGKTYGLWKC 205
D +++LW K
Sbjct: 274 LDRSVKLWNLQNANNKSDSKT 294
Score = 45.2 bits (105), Expect = 3e-06
Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 4/75 (5%)
Query: 157 EIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK---TYGLWKCIEGGLNNS 213
E+ H + CVKFS DGE A+G + T ++++ + G N
Sbjct: 54 ELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENL 112
Query: 214 LGLDSSGHLNNVHEV 228
S + V
Sbjct: 113 NTSSSPSSDLYIRSV 127
Score = 44.4 bits (103), Expect = 5e-06
Identities = 35/218 (16%), Positives = 59/218 (27%), Gaps = 18/218 (8%)
Query: 1 MCVDGKPMLRQGDTGDWIGTFE---------------GHKGCVWGVDINKDASKAASGAA 45
+ P + T D+ + H V V + D A+G
Sbjct: 23 LDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGCN 82
Query: 46 D---FQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGS 102
++ L++ D + D S+ S DG +
Sbjct: 83 KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAED 142
Query: 103 CVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFK 162
+ + I + SL V G D + +D TG +
Sbjct: 143 RLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 202
Query: 163 GHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTY 200
G DG+ A+GS D +R+W + G
Sbjct: 203 IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 240
Score = 43.2 bits (100), Expect = 1e-05
Identities = 10/66 (15%), Positives = 21/66 (31%), Gaps = 9/66 (13%)
Query: 4 DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKT 63
D + +G+ + +GH+ V V + +S + + D
Sbjct: 329 DRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEY---------NVFATGSGDCK 379
Query: 64 VRLWDV 69
R+W
Sbjct: 380 ARIWKY 385
Score = 42.9 bits (99), Expect = 2e-05
Identities = 13/83 (15%), Positives = 24/83 (28%), Gaps = 12/83 (14%)
Query: 128 SLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHF------------GPIHCVKFSP 175
S++ + V G D + ++ K + V +
Sbjct: 259 SVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ 318
Query: 176 DGELYASGSEDGTLRLWQTNVGK 198
+ E SGS+D + W G
Sbjct: 319 NDEYILSGSKDRGVLFWDKKSGN 341
Score = 39.8 bits (91), Expect = 2e-04
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 30/165 (18%)
Query: 46 DFQAKNNTRLISCAEDKTVRLWDVSASAE-----VQKLEFGAVPNSLEISRDGTTITVTH 100
D +++ + + L++ + E + L+ +V ++ S DG +
Sbjct: 22 DLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC 81
Query: 101 GSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIES 160
+ L+ + + LN+ S
Sbjct: 82 NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTS-------------------------S 116
Query: 161 FKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKC 205
I V FSPDG+ A+G+ED +R+W K + +
Sbjct: 117 SPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQG 161
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 57.1 bits (136), Expect = 2e-10
Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Query: 123 QVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYAS 182
+ SL FV G+D + + GA I + S D + +
Sbjct: 265 ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVT 323
Query: 183 GSEDGTLRLWQ 193
GS D +++
Sbjct: 324 GSGDKKATVYE 334
Score = 43.3 bits (100), Expect = 1e-05
Identities = 6/35 (17%), Positives = 12/35 (34%), Gaps = 1/35 (2%)
Query: 163 GHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVG 197
H + V S +G G +++W +
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHP 82
Score = 42.9 bits (99), Expect = 1e-05
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 164 HFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198
H + +KF+ G+ + S +D L W+T G
Sbjct: 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA 298
Score = 39.8 bits (91), Expect = 1e-04
Identities = 9/46 (19%), Positives = 17/46 (36%)
Query: 51 NNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTI 96
+S +D + W A + + + + S +IS D I
Sbjct: 276 CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYI 321
Score = 34.4 bits (77), Expect = 0.008
Identities = 10/66 (15%), Positives = 20/66 (30%), Gaps = 16/66 (24%)
Query: 4 DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKT 63
D + G I V DI+ D + +++ + DK
Sbjct: 286 DNLLNAWRTPYGASIFQS-KESSSVLSCDISVD---------------DKYIVTGSGDKK 329
Query: 64 VRLWDV 69
+++V
Sbjct: 330 ATVYEV 335
Score = 34.0 bits (76), Expect = 0.011
Identities = 33/191 (17%), Positives = 58/191 (30%), Gaps = 24/191 (12%)
Query: 23 GHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGA 82
H V V I+ +G V++WD+S +
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGG----------------KGCVKVWDISHPGNKSPVSQLD 92
Query: 83 VP------NSLEISRDGTTITV--THGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSE 134
S ++ DG T+ V + + A IK + +L ++ +
Sbjct: 93 CLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPD 152
Query: 135 RPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQT 194
+ D + +D + F+GH C+ S DG +G D T+R W
Sbjct: 153 SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDL 212
Query: 195 NVGKTYGLWKC 205
G+
Sbjct: 213 REGRQLQQHDF 223
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 56.8 bits (135), Expect = 3e-10
Identities = 24/151 (15%), Positives = 57/151 (37%), Gaps = 14/151 (9%)
Query: 51 NNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDAN 110
++ ++S + D+T+++W+ S V+ L + RD ++ + + + D
Sbjct: 147 DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE 206
Query: 111 SLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAE---------IESF 161
++ + ++ + V G D K+ +D + + +
Sbjct: 207 CGACLRVLEGHEELVRCI---RFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL 263
Query: 162 KGHFGPIHCVKFSPDGELYASGSEDGTLRLW 192
H G + ++F D S S D T+ +W
Sbjct: 264 VEHSGRVFRLQF--DEFQIVSSSHDDTILIW 292
Score = 42.1 bits (97), Expect = 2e-05
Identities = 9/42 (21%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 157 EIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198
I ++C D + SG D T+++W N +
Sbjct: 7 RIHCRSETSKGVYC--LQYDDQKIVSGLRDNTIKIWDKNTLE 46
Score = 37.5 bits (85), Expect = 7e-04
Identities = 10/66 (15%), Positives = 21/66 (31%), Gaps = 17/66 (25%)
Query: 3 VDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDK 62
+ R + T H G V+ + + +++S + D
Sbjct: 245 LVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD-----------------EFQIVSSSHDD 287
Query: 63 TVRLWD 68
T+ +WD
Sbjct: 288 TILIWD 293
Score = 33.7 bits (75), Expect = 0.014
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 138 FVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVG 197
V D + ++ ST + + GH I C+++ L SGS D T+RLW G
Sbjct: 151 IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECG 208
Query: 198 KTYGLWKC 205
+ +
Sbjct: 209 ACLRVLEG 216
Score = 32.9 bits (73), Expect = 0.024
Identities = 6/29 (20%), Positives = 16/29 (55%)
Query: 51 NNTRLISCAEDKTVRLWDVSASAEVQKLE 79
++ +++S D T+++WD + + L
Sbjct: 24 DDQKIVSGLRDNTIKIWDKNTLECKRILT 52
Score = 29.8 bits (65), Expect = 0.25
Identities = 9/39 (23%), Positives = 16/39 (41%)
Query: 137 IFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSP 175
V G D + +D +T GH G + C+++
Sbjct: 27 KIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE 65
Score = 26.7 bits (57), Expect = 2.5
Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 137 IFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNV 196
+ V G D + +D GA + +GH + C++F SG+ DG +++W
Sbjct: 190 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--RIVSGAYDGKIKVWDLVA 247
Query: 197 GK 198
Sbjct: 248 AL 249
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 56.8 bits (135), Expect = 3e-10
Identities = 14/163 (8%), Positives = 38/163 (23%), Gaps = 19/163 (11%)
Query: 51 NNTRLISCAEDKTVRLWDVS-------ASAEVQKLEF-GAVPNSLEISRDGTTITVTHGS 102
++ L + D ++ + PN ++ T
Sbjct: 189 DSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYD 248
Query: 103 CVTFLDANSLELIKEHKVPAQVHS-------ASLLLNSERPIFVCGGEDLKMYKFDYSTG 155
+S + + + + + E + K+D T
Sbjct: 249 LNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTR 308
Query: 156 AEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198
+ ++ S D + +DG + + +
Sbjct: 309 KV----TEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPE 347
Score = 33.7 bits (75), Expect = 0.015
Identities = 4/61 (6%), Positives = 17/61 (27%), Gaps = 15/61 (24%)
Query: 19 GTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKL 78
K + + ++ D ++ +D + + + + + +
Sbjct: 308 RKVTEVKNNLTDLRLSAD---------------RKTVMVRKDDGKIYTFPLEKPEDERTV 352
Query: 79 E 79
E
Sbjct: 353 E 353
Score = 33.3 bits (74), Expect = 0.017
Identities = 8/55 (14%), Positives = 17/55 (30%), Gaps = 4/55 (7%)
Query: 146 KMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDG--TLRLWQTNVGK 198
+ + D S ++ I V+ D ++ L ++ GK
Sbjct: 25 QAFIQDVSGTYVLK--VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK 77
Score = 29.8 bits (65), Expect = 0.23
Identities = 17/185 (9%), Positives = 34/185 (18%), Gaps = 22/185 (11%)
Query: 23 GHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGA 82
+ V D A E + ++D + E
Sbjct: 40 PEPLRIRYVRRGGDTKVAFIHGTR-------------EGDFLGIYDYRTGKAEKFEENLG 86
Query: 83 VPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGG 142
++ + R+G V + + + ++ G
Sbjct: 87 NVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGF 146
Query: 143 EDLKMYKFDYSTGAE---------IESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQ 193
Y A I + + F D + S
Sbjct: 147 PLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPD 206
Query: 194 TNVGK 198
V
Sbjct: 207 RVVLN 211
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 55.6 bits (133), Expect = 9e-10
Identities = 24/187 (12%), Positives = 47/187 (25%), Gaps = 18/187 (9%)
Query: 52 NTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 110
N ++ + + L D S L+ G + +S G + V V +D
Sbjct: 32 NLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLW 91
Query: 111 SLELIKEHKVPAQVHSASLLLNSE-----RPIFVCGGEDLKMYKFDYSTGAEIESFK--- 162
E ++ + S+ + + + D T +
Sbjct: 92 MKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRG 151
Query: 163 --------GHFGPIHCVKFSPDG-ELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNS 213
+ + S E + E G + L + +
Sbjct: 152 MTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHD 211
Query: 214 LGLDSSG 220
GLD S
Sbjct: 212 GGLDGSH 218
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 54.9 bits (130), Expect = 1e-09
Identities = 11/80 (13%), Positives = 25/80 (31%), Gaps = 2/80 (2%)
Query: 128 SLLLNSERPIFVCGGEDLKMYKFDYSTG--AEIESFKGHFGPIHCVKFSPDGELYASGSE 185
N +R + +++ ++ S ++ K H G + V ++PD +
Sbjct: 12 CHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT 71
Query: 186 DGTLRLWQTNVGKTYGLWKC 205
D +W
Sbjct: 72 DRNAYVWTLKGRTWKPTLVI 91
Score = 45.6 bits (106), Expect = 2e-06
Identities = 6/32 (18%), Positives = 14/32 (43%)
Query: 167 PIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198
PI C ++ D A + + +++ + K
Sbjct: 9 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNK 40
Score = 41.8 bits (96), Expect = 3e-05
Identities = 24/148 (16%), Positives = 44/148 (29%), Gaps = 9/148 (6%)
Query: 51 NNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLE-ISRDGTTITVTH-GSCVTFLD 108
N +R+ + D TV L D V L +P + + + H V F
Sbjct: 212 NGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTY 271
Query: 109 ANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPI 168
++ + +S + R F K + S A H +
Sbjct: 272 DSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLD---KKASSEGSAAAGAGLDSLHKNSV 328
Query: 169 HCVKFSPDGE----LYASGSEDGTLRLW 192
+ G+ + + DG + +W
Sbjct: 329 SQISVLSGGKAKCSQFCTTGMDGGMSIW 356
Score = 36.8 bits (83), Expect = 0.001
Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 17/67 (25%)
Query: 4 DGKPMLRQGDTGDW--IGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAED 61
+ + + + W + + H G V GVD D + R+++C D
Sbjct: 28 NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPD---------------SNRIVTCGTD 72
Query: 62 KTVRLWD 68
+ +W
Sbjct: 73 RNAYVWT 79
Score = 34.8 bits (78), Expect = 0.006
Identities = 23/166 (13%), Positives = 50/166 (30%), Gaps = 11/166 (6%)
Query: 50 KNNTRLISCAEDKTVRLWDVSASAEVQKLEF----GAVPNSLEISRDGTTI-TVTHGSCV 104
K+ T++ C + V +++ S + VQ E G V ++ + D I T
Sbjct: 17 KDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQV-TGVDWAPDSNRIVTCGTDRNA 75
Query: 105 TFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKF-----DYSTGAEIE 159
+ +A + + G ++ +
Sbjct: 76 YVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKH 135
Query: 160 SFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKC 205
K + + + P+ L A+GS D R++ + +
Sbjct: 136 IKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAP 181
Score = 34.8 bits (78), Expect = 0.006
Identities = 10/67 (14%), Positives = 19/67 (28%), Gaps = 11/67 (16%)
Query: 5 GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTV 64
K +G G HK V + + ++ + D +
Sbjct: 305 DKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKA-----------KCSQFCTTGMDGGM 353
Query: 65 RLWDVSA 71
+WDV +
Sbjct: 354 SIWDVRS 360
Score = 28.7 bits (62), Expect = 0.67
Identities = 10/71 (14%), Positives = 21/71 (29%), Gaps = 1/71 (1%)
Query: 128 SLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDG 187
+ ++ D + D + + P+ V F + L A+G D
Sbjct: 206 GVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGH-DC 264
Query: 188 TLRLWQTNVGK 198
L+ +
Sbjct: 265 FPVLFTYDSAA 275
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 54.6 bits (129), Expect = 1e-09
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 155 GAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198
G+ + GH I + S DG+ S +G + W + G
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGI 45
Score = 42.7 bits (98), Expect = 2e-05
Identities = 6/57 (10%), Positives = 16/57 (28%), Gaps = 2/57 (3%)
Query: 138 FVCGGEDLKMYKFDYSTGAEIE--SFKGHFGPIHCVKFSPDGELYASGSEDGTLRLW 192
G D + ++ + ++ H + S +D ++ W
Sbjct: 239 LATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFW 295
Score = 40.7 bits (93), Expect = 8e-05
Identities = 8/62 (12%), Positives = 15/62 (24%), Gaps = 15/62 (24%)
Query: 20 TFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE 79
GH + + + D L S + + WD+S +
Sbjct: 7 VRYGHNKAITALSSSAD---------------GKTLFSADAEGHINSWDISTGISNRVFP 51
Query: 80 FG 81
Sbjct: 52 DV 53
Score = 33.0 bits (73), Expect = 0.024
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 51 NNTRLISCAEDKTVRLWDVS 70
N T ++S +D ++ W+V
Sbjct: 279 NETTIVSAGQDSNIKFWNVP 298
Score = 27.6 bits (59), Expect = 1.3
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 164 HFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198
H + CV +SPD A+GS D ++ +W N
Sbjct: 223 HTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPS 257
Score = 27.3 bits (58), Expect = 1.5
Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 1/79 (1%)
Query: 128 SLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESF-KGHFGPIHCVKFSPDGELYASGSED 186
+L +++ + + +D STG F H I +K + G+L+ +D
Sbjct: 17 ALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDD 76
Query: 187 GTLRLWQTNVGKTYGLWKC 205
+ G
Sbjct: 77 HLKVVPAGGSGVDSSKAVA 95
Score = 26.1 bits (55), Expect = 3.8
Identities = 10/57 (17%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 56 ISCAEDKTVRLWDVSASAEVQKLEFGA----VPNSLEISRDGTTITVTHGSCVTFLD 108
+ + D +V +W+++ ++ + GA NS+ + T ++ S + F +
Sbjct: 240 ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 51.8 bits (122), Expect = 2e-08
Identities = 9/68 (13%), Positives = 23/68 (33%)
Query: 158 IESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLD 217
++ + I +K P L S DG+L +++ ++ + L +
Sbjct: 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCN 63
Query: 218 SSGHLNNV 225
+ +
Sbjct: 64 FIDNTDLQ 71
Score = 46.8 bits (109), Expect = 7e-07
Identities = 10/65 (15%), Positives = 22/65 (33%), Gaps = 1/65 (1%)
Query: 128 SLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDG 187
S+ + G D + ++ T +I++F VK + + + D
Sbjct: 256 SIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIACSDNILCLATSDD 314
Query: 188 TLRLW 192
T +
Sbjct: 315 TFKTN 319
Score = 39.1 bits (89), Expect = 2e-04
Identities = 9/66 (13%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
Query: 157 EIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGL 216
P++ ++FSP + + DG + W K + + ++ + +
Sbjct: 243 LNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK--IKNFAKFNEDSVVKI 300
Query: 217 DSSGHL 222
S ++
Sbjct: 301 ACSDNI 306
Score = 38.7 bits (88), Expect = 4e-04
Identities = 6/90 (6%), Positives = 20/90 (22%), Gaps = 19/90 (21%)
Query: 18 IGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQK 77
+ + K + + I + L+ + D ++ ++ A+
Sbjct: 4 VQIEQAPKDYISDIKIIPS---------------KSLLLITSWDGSLTVYKFDIQAKNVD 48
Query: 78 L----EFGAVPNSLEISRDGTTITVTHGSC 103
L + +
Sbjct: 49 LLQSLRYKHPLLCCNFIDNTDLQIYVGTVQ 78
Score = 35.2 bits (79), Expect = 0.005
Identities = 10/103 (9%), Positives = 30/103 (29%)
Query: 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAE 60
+DG+ + D KD + A + + + L +
Sbjct: 212 SSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS 271
Query: 61 DKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSC 103
D + W++ +++ + ++I+ + +
Sbjct: 272 DGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDD 314
Score = 31.0 bits (68), Expect = 0.12
Identities = 7/82 (8%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Query: 128 SLLLNSERPIFVCGGEDLKMYKFDYSTGA---EIESFKGHFGPIHCVKFSPDGE-LYASG 183
+ + + + + D + + + A ++ + P+ C F + + G
Sbjct: 16 DIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVG 75
Query: 184 SEDGTLRLWQTNVGKTYGLWKC 205
+ G + ++
Sbjct: 76 TVQGEILKVDLIGSPSFQALTN 97
Score = 25.6 bits (54), Expect = 6.6
Identities = 12/95 (12%), Positives = 25/95 (26%), Gaps = 4/95 (4%)
Query: 138 FVCGGEDLKMYKFDYSTGAEIESFKGHFGP----IHCVKFSPDGELYASGSEDGTLRLWQ 193
+ G + ++ F + G + E YA S DG + +
Sbjct: 163 LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEF 222
Query: 194 TNVGKTYGLWKCIEGGLNNSLGLDSSGHLNNVHEV 228
+ + L L + V+ +
Sbjct: 223 FDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSI 257
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 50.3 bits (118), Expect = 4e-08
Identities = 9/69 (13%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Query: 125 HSASLLLNSERPIFVCGGEDLKMYKFDYSTGAE-IESFKGHFGPIHCVKFSPDGELYASG 183
+ E + G D ++ + + I++ H ++ + + L S
Sbjct: 217 EKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTL-VSS 275
Query: 184 SEDGTLRLW 192
D ++ W
Sbjct: 276 GADACIKRW 284
Score = 43.4 bits (100), Expect = 9e-06
Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Query: 158 IESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKT 199
+++ GH I + +P SGS DG + W ++
Sbjct: 6 LKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ 43
Score = 39.2 bits (89), Expect = 2e-04
Identities = 9/57 (15%), Positives = 15/57 (26%), Gaps = 16/57 (28%)
Query: 13 DTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDV 69
I HK V + + L+S D ++ W+V
Sbjct: 246 RPMKIIKALNAHKDGVNNLLWETP----------------STLVSSGADACIKRWNV 286
Score = 34.5 bits (77), Expect = 0.007
Identities = 10/53 (18%), Positives = 16/53 (30%), Gaps = 19/53 (35%)
Query: 18 IGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVS 70
+ T GH + + +N LIS + D + W S
Sbjct: 6 LKTISGHNKGITALTVNP-------------------LISGSYDGRIMEWSSS 39
Score = 29.9 bits (65), Expect = 0.21
Identities = 7/60 (11%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 47 FQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFG--AVPNSLEISRDGTTITVTHGSCV 104
+ + + + D + ++ V ++ K N+L T ++ +C+
Sbjct: 222 EEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACI 281
Score = 28.0 bits (60), Expect = 1.0
Identities = 5/36 (13%), Positives = 12/36 (33%)
Query: 164 HFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKT 199
+ + +L A+GS D + ++
Sbjct: 214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMK 249
Score = 25.3 bits (53), Expect = 6.7
Identities = 7/43 (16%), Positives = 15/43 (34%), Gaps = 5/43 (11%)
Query: 138 FVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELY 180
+ G D ++ ++ S+ + H I + S E
Sbjct: 24 LISGSYDGRIMEWSSSSM-----HQDHSNLIVSLDNSKAQEYS 61
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 50.3 bits (118), Expect = 4e-08
Identities = 16/69 (23%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Query: 137 IFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNV 196
I C G + + + E + H K SP G ASG G +R+W T
Sbjct: 32 IQYCNGTSVYTV--PVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQ 89
Query: 197 GKTYGLWKC 205
Sbjct: 90 TTHILKTTI 98
Score = 46.4 bits (108), Expect = 8e-07
Identities = 5/58 (8%), Positives = 15/58 (25%), Gaps = 1/58 (1%)
Query: 136 PIFVCGGEDLKMYKFDYSTGAEIESFKGHFG-PIHCVKFSPDGELYASGSEDGTLRLW 192
D + ++ +T ++ + + S S +G +
Sbjct: 251 TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308
Score = 39.1 bits (89), Expect = 2e-04
Identities = 15/79 (18%), Positives = 26/79 (32%)
Query: 144 DLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLW 203
+ + H G + + +SPDG AS S D T+++W K
Sbjct: 217 NGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTI 276
Query: 204 KCIEGGLNNSLGLDSSGHL 222
+ LG+ +
Sbjct: 277 PVGTRIEDQQLGIIWTKQA 295
Score = 36.8 bits (83), Expect = 0.002
Identities = 11/62 (17%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 50 KNNTRLISCAEDKTVRLWDVSASAEVQKLEFGA--VPNSLEISRDGTTI-TVTHGSCVTF 106
+ T++ S + DKT+++W+V+ + + G L I + +++ + F
Sbjct: 248 PDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINF 307
Query: 107 LD 108
++
Sbjct: 308 VN 309
Score = 29.9 bits (65), Expect = 0.25
Identities = 5/51 (9%), Positives = 9/51 (17%)
Query: 2 CVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNN 52
C + + H + ASG +
Sbjct: 35 CNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIW 85
Score = 27.2 bits (58), Expect = 1.7
Identities = 2/20 (10%), Positives = 7/20 (35%)
Query: 49 AKNNTRLISCAEDKTVRLWD 68
L+S + + + +
Sbjct: 290 IWTKQALVSISANGFINFVN 309
Score = 26.8 bits (57), Expect = 2.5
Identities = 3/33 (9%), Positives = 9/33 (27%), Gaps = 1/33 (3%)
Query: 166 GPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198
G + +P G+ + ++
Sbjct: 18 GTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLT 49
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 48.7 bits (114), Expect = 1e-07
Identities = 9/73 (12%), Positives = 20/73 (27%), Gaps = 2/73 (2%)
Query: 137 IFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGE-LYASGSEDGTLRLWQTN 195
++ E + D ++ + P SPDG +Y + + + + T
Sbjct: 4 AYIANSESDNISVIDVTSNKVTATIPVGSNP-MGAVISPDGTKVYVANAHSNDVSIIDTA 62
Query: 196 VGKTYGLWKCIEG 208
Sbjct: 63 TNNVIATVPAGSS 75
Score = 44.1 bits (102), Expect = 5e-06
Identities = 10/53 (18%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Query: 147 MYKFDYSTGAEIESFKGHFGPIHCVKFSPDGE-LYASGSEDGTLRLWQTNVGK 198
+ D T P + +PDG+ +Y + S T+ + T
Sbjct: 226 VSMIDTGTNKITARIPVGPDP-AGIAVTPDGKKVYVALSFCNTVSVIDTATNT 277
Score = 41.8 bits (96), Expect = 3e-05
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 56 ISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT--HGSCVTFLDANS 111
I+ +E + + DV+++ + G+ P IS DGT + V H + V+ +D +
Sbjct: 6 IANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTAT 63
Score = 41.0 bits (94), Expect = 6e-05
Identities = 9/87 (10%), Positives = 20/87 (22%), Gaps = 15/87 (17%)
Query: 1 MCVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAE 60
+ T G+ + D K ++ +
Sbjct: 220 DKYFNTVSMIDTGTNKITARIPVGPD-PAGIAVTPDGKKV--------------YVALSF 264
Query: 61 DKTVRLWDVSASAEVQKLEFGAVPNSL 87
TV + D + + + G P +
Sbjct: 265 CNTVSVIDTATNTITATMAVGKNPYAS 291
Score = 26.8 bits (57), Expect = 2.7
Identities = 5/58 (8%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Query: 110 NSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGP 167
+ ++ V ++ + ++ ++V + D +T + P
Sbjct: 232 GTNKITARIPVGPDPAGIAVTPDGKK-VYVALSFCNTVSVIDTATNTITATMAVGKNP 288
Score = 26.4 bits (56), Expect = 3.2
Identities = 8/58 (13%), Positives = 15/58 (25%), Gaps = 15/58 (25%)
Query: 13 DTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVS 70
+ T G I+ D +K ++ A V + D +
Sbjct: 20 TSNKVTATIPVGSN-PMGAVISPDGTKV--------------YVANAHSNDVSIIDTA 62
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 48.3 bits (113), Expect = 3e-07
Identities = 14/161 (8%), Positives = 40/161 (24%), Gaps = 20/161 (12%)
Query: 55 LISCAEDKTVRLWDVSASAEVQKL---EFGAVPNSLEISRDGTTITVT--HGSCVTFLDA 109
+++ A + + D A + + + G P ++ G T + +D
Sbjct: 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63
Query: 110 NSLELIKEHKVPAQVH----SASLLLNSERPIFVCGGEDLKMYKFDYSTG---------- 155
+ E + + L+ + +++ +
Sbjct: 64 VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE 123
Query: 156 -AEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195
I + ++ DG D + +
Sbjct: 124 TLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAG 164
Score = 47.1 bits (110), Expect = 5e-07
Identities = 24/194 (12%), Positives = 48/194 (24%), Gaps = 11/194 (5%)
Query: 24 HKGCVWGVDINKDASKAASGAADFQAKNNT--------RLISCAEDKTVRLWDVSASAEV 75
+ + +D SK D + + S + + ++ +
Sbjct: 133 APRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQH 192
Query: 76 QKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSER 135
+ A P + + + +D + E+ V S +N +
Sbjct: 193 ESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAK 252
Query: 136 PIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195
+ FD A I+ + V S DG G G L +
Sbjct: 253 TRAFG--AYNVLESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAE 309
Query: 196 VGKTYGLWKCIEGG 209
+ G
Sbjct: 310 TLEKKGQVDLPGNA 323
Score = 44.8 bits (104), Expect = 3e-06
Identities = 12/77 (15%), Positives = 21/77 (27%), Gaps = 3/77 (3%)
Query: 135 RPIFVCGGEDLKMYKFDYSTGAEIESFK--GHFGPIHCVKFSPDGE-LYASGSEDGTLRL 191
R + K+ D A + +P G YA+ ++ +L
Sbjct: 1 RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK 60
Query: 192 WQTNVGKTYGLWKCIEG 208
G+T G
Sbjct: 61 IDLVTGETLGRIDLSTP 77
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 47.6 bits (112), Expect = 4e-07
Identities = 19/167 (11%), Positives = 48/167 (28%), Gaps = 6/167 (3%)
Query: 51 NNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDA 109
N ++ + + L D + V+ ++ G + +S G + V + + +D
Sbjct: 31 PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDL 90
Query: 110 NSLELIKEHKVPAQVHSASLLLNSE-----RPIFVCGGEDLKMYKFDYSTGAEIESFKGH 164
+ E K ++ + + S+ + R + D T +
Sbjct: 91 WAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTR 150
Query: 165 FGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLN 211
+ + P+ + A + L + N
Sbjct: 151 GMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDN 197
Score = 25.3 bits (54), Expect = 8.8
Identities = 4/57 (7%), Positives = 12/57 (21%), Gaps = 7/57 (12%)
Query: 149 KFDYSTGAEIESFKGHFGPIHCVKFSPDGE-------LYASGSEDGTLRLWQTNVGK 198
++ +G G +K P ++ ++
Sbjct: 287 NHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLD 343
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 47.2 bits (110), Expect = 5e-07
Identities = 10/69 (14%), Positives = 24/69 (34%), Gaps = 2/69 (2%)
Query: 125 HSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIES-FKGHFGPIHCVKFSPDGELYASG 183
+ +++ + G + + ++ +G + + I V F L A+
Sbjct: 283 NLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LVAAV 341
Query: 184 SEDGTLRLW 192
+DG L
Sbjct: 342 EKDGQSFLE 350
Score = 42.6 bits (98), Expect = 2e-05
Identities = 10/69 (14%), Positives = 23/69 (33%)
Query: 137 IFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNV 196
+ G +D + +D + GH G + +K++ G L + ++
Sbjct: 25 YVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKG 84
Query: 197 GKTYGLWKC 205
T+
Sbjct: 85 CCTHVFEGH 93
Score = 41.0 bits (94), Expect = 5e-05
Identities = 6/42 (14%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 157 EIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198
+ + +GH + + +G++D +R++ + K
Sbjct: 4 QRTTLRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKK 44
Score = 39.5 bits (90), Expect = 2e-04
Identities = 21/149 (14%), Positives = 45/149 (30%), Gaps = 20/149 (13%)
Query: 20 TFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLE 79
T GH V F + +I+ A+DK +R++D + +L
Sbjct: 7 TLRGHMTSVIT-------------CLQF---EDNYVITGADDKMIRVYDSINKKFLLQLS 50
Query: 80 F--GAVPNSLEISRDGTTITV-THGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERP 136
G V +L+ + G ++ T + + + V ++
Sbjct: 51 GHDGGV-WALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIK 109
Query: 137 IFVCGGEDLKMYKFDYSTGAEIESFKGHF 165
V G D ++ + + +
Sbjct: 110 YIVTGSRDNTLHVWKLPKESSVPDHGEEH 138
Score = 32.6 bits (72), Expect = 0.030
Identities = 36/210 (17%), Positives = 69/210 (32%), Gaps = 8/210 (3%)
Query: 4 DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKD-----ASKAASGAADFQAKNNTRLISC 58
D + ++ GH G VW + S + K +
Sbjct: 32 DKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFE 91
Query: 59 AEDKTVRLWDVSASAEVQKLEFGAVPNSLEI--SRDGTTITVTHGSCVTFLDANSLELIK 116
+ TVR D+ ++ + G+ N+L + +++ L ++ E
Sbjct: 92 GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENP 151
Query: 117 EHKVPAQVHSASLLLNSERP-IFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSP 175
+ H AS+ S I V G D + +D + + GH I+ +
Sbjct: 152 YFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDH 211
Query: 176 DGELYASGSEDGTLRLWQTNVGKTYGLWKC 205
+ + S S D T+R+W G+ +
Sbjct: 212 ERKRCISASMDTTIRIWDLENGELMYTLQG 241
Score = 32.6 bits (72), Expect = 0.039
Identities = 7/35 (20%), Positives = 11/35 (31%), Gaps = 1/35 (2%)
Query: 164 HFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198
H F + SGS + ++ GK
Sbjct: 281 HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGK 314
Score = 28.3 bits (61), Expect = 0.79
Identities = 3/52 (5%), Positives = 15/52 (28%)
Query: 51 NNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGS 102
+ ++ + ++++ + V ++ G T+
Sbjct: 292 VSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEK 343
Score = 26.8 bits (57), Expect = 2.4
Identities = 6/53 (11%), Positives = 12/53 (22%), Gaps = 16/53 (30%)
Query: 20 TFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSAS 72
+W V+ T + + +D L + S
Sbjct: 319 NILKDADQIWSVNFK----------------GKTLVAAVEKDGQSFLEILDFS 355
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 46.5 bits (109), Expect = 8e-07
Identities = 18/200 (9%), Positives = 39/200 (19%), Gaps = 21/200 (10%)
Query: 12 GDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSA 71
D +G +G G I D + F +R V + D +
Sbjct: 5 ADAKKLLGQIDGGF--GPGFAIAPDRKASVVATTYF-----SRGSHGTRTDVVEIIDNTT 57
Query: 72 SAEVQKLEFGAVPNSLE----ISRDGTT-ITVTHGS---CVTFLDANSLELIKEHKVPAQ 123
++ A + + + + +++
Sbjct: 58 LDHAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKM-LSEIDT 116
Query: 124 VHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEI--ESFKGHFGPIHCVKFSPDGE--- 178
+ + + G E F
Sbjct: 117 AACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKG 176
Query: 179 LYASGSEDGTLRLWQTNVGK 198
Y + G +R + K
Sbjct: 177 DYLFTTYGGNVRSADFSGDK 196
Score = 46.5 bits (109), Expect = 8e-07
Identities = 20/203 (9%), Positives = 45/203 (22%), Gaps = 19/203 (9%)
Query: 4 DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKT 63
+ T D G V + + +A G L
Sbjct: 47 TDVVEIIDNTTLDHAGEIVIPAKHAQHVPSPYNTAFSADGKR---------LYVANITPA 97
Query: 64 VRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT---HGSCVTFLDANSLELIKEHKV 120
+ + + + L + G G +T + + K
Sbjct: 98 ASVTVI-DAVSKKMLSEIDTAACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMS 156
Query: 121 PAQV----HSASLLLNSERPIFVCGGEDLKMYKFDYSTG--AEIESFKGHFGPIHCVKFS 174
A + A + + + ++ + D+S A + + +
Sbjct: 157 DAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWR 216
Query: 175 PDGELYASGSEDGTLRLWQTNVG 197
P G + + G
Sbjct: 217 PGGMQQTAVQAKQNRYYVLMHKG 239
Score = 41.9 bits (97), Expect = 3e-05
Identities = 15/177 (8%), Positives = 34/177 (19%), Gaps = 25/177 (14%)
Query: 27 CVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVP-- 84
+ A ++ + VR D S + +
Sbjct: 150 EAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDA 209
Query: 85 -NSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGE 143
+ G T + HK P +
Sbjct: 210 ERAEGWRPGGMQQTAVQAKQNRYYVLMHKGTDGSHKDPGTQVWVY------------DLK 257
Query: 144 DLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGE--LYASGSEDGTLRLWQTNVGK 198
+ ++E + ++ S D + Y + + + G
Sbjct: 258 SKQRVARWDLAQQKVEP-------LVSIQVSEDDKPLFYGLTATSDLV-VMDARTGA 306
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 46.8 bits (109), Expect = 9e-07
Identities = 31/234 (13%), Positives = 64/234 (27%), Gaps = 65/234 (27%)
Query: 20 TFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSA-------- 71
+ H ++ V N+ +SC+ D +++WD
Sbjct: 9 AGKAHDADIFSVSAC-----------------NSFTVSCSGDGYLKVWDNKLLDNENPKD 51
Query: 72 ---SAEVQKLEFGAVPNSLEISRDGTTIT---------------VTHGSCVTFLDANSLE 113
S V K V I RD + +T + L+
Sbjct: 52 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLD 111
Query: 114 LIKEHKVPAQVHSASLLLNSERP---IFVCGGEDLKMYKFDYSTGAE------------- 157
L+ + +++R V Y + + A+
Sbjct: 112 LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTL 171
Query: 158 -----IESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCI 206
+ES V S G + A+G +GT+++ + + + ++
Sbjct: 172 ELQGTVESPMTPSQFATSVDISERGLI-ATGFNNGTVQISELSTLRPLYNFESQ 224
Score = 42.5 bits (98), Expect = 2e-05
Identities = 13/61 (21%), Positives = 18/61 (29%), Gaps = 2/61 (3%)
Query: 156 AEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLG 215
A + K H I V S S DG L++W + + G
Sbjct: 5 ATANAGKAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSG 62
Query: 216 L 216
L
Sbjct: 63 L 63
Score = 41.0 bits (94), Expect = 6e-05
Identities = 31/235 (13%), Positives = 61/235 (25%), Gaps = 40/235 (17%)
Query: 4 DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKT 63
G + + D K + D+ K + A A + RL++ T
Sbjct: 88 SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGT 147
Query: 64 VRLWDVSASAEVQK-------------------LEFGAVPNSLEISRDGTTITVTHGSCV 104
+W A+ + S++IS G T + V
Sbjct: 148 TYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTV 207
Query: 105 TFLDANSLELIKEHKVPAQVHSASLLLNSE-----RPIFVCGGED--------------- 144
+ ++L + + + + S + S + +
Sbjct: 208 QISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE 267
Query: 145 -LKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198
+ + H + + F+ GE S DG LR W +
Sbjct: 268 RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE 322
Score = 37.5 bits (85), Expect = 7e-04
Identities = 17/88 (19%), Positives = 26/88 (29%), Gaps = 8/88 (9%)
Query: 136 PIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPI----HCVKFSPDGELYASGSEDGTLRL 191
G D K+ +D T I + H I + G+ A G +
Sbjct: 302 ETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEP---GVFDV 358
Query: 192 WQTNVGKTYGLWKCIEGGLNNSLGLDSS 219
G G+ + L + LD S
Sbjct: 359 KFLKKGWRSGMGADLNESL-CCVCLDRS 385
Score = 28.3 bits (61), Expect = 0.81
Identities = 13/83 (15%), Positives = 24/83 (28%), Gaps = 16/83 (19%)
Query: 4 DGKPMLRQGDTGDWIGTFEGHKGCV----WGVDINKDASKAASGAAD------------F 47
DGK T + I T H + + +++ A
Sbjct: 310 DGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGM 369
Query: 48 QAKNNTRLISCAEDKTVRLWDVS 70
A N L D+++R + +
Sbjct: 370 GADLNESLCCVCLDRSIRWFREA 392
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 45.9 bits (107), Expect = 1e-06
Identities = 25/206 (12%), Positives = 49/206 (23%), Gaps = 28/206 (13%)
Query: 13 DTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSAS 72
+ + + A + ++ + T +
Sbjct: 137 EGKAFKRMLDVPDCYHIFPT-------APDTFFMHCRDGSLAKVAFGTEGTPEITHTEVF 189
Query: 73 AEVQKLEFGAVPNS------LEISRDGTTITVTHGS-CVTFLDANSLELIKEHKVPAQVH 125
+ S + + G + S FL A E +
Sbjct: 190 HPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPG 249
Query: 126 SASLL-----------LNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFS 174
+ L +R + + D TG + F+ I + S
Sbjct: 250 GWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVS 308
Query: 175 PDGE--LYASGSEDGTLRLWQTNVGK 198
D + LYA + D TL + G+
Sbjct: 309 QDEKPLLYALSTGDKTLYIHDAESGE 334
Score = 44.8 bits (104), Expect = 4e-06
Identities = 24/170 (14%), Positives = 44/170 (25%), Gaps = 28/170 (16%)
Query: 57 SCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSC-----------VT 105
A + D A + ++ G +P + ++ DG+ I V
Sbjct: 23 HFAAVTQQFVIDGEAGRVIGMIDGGFLP-NPVVADDGSFIAHASTVFSRIARGERTDYVE 81
Query: 106 FLDANSLELIKEHKVP--------AQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAE 157
D +L + ++P SL + + +F + D A
Sbjct: 82 VFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF 141
Query: 158 IESFKGH-------FGPIHCVKFSPDG-ELYASGSEDGTLRLWQTNVGKT 199
P DG + +GT + T V
Sbjct: 142 KRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHP 191
Score = 44.0 bits (102), Expect = 6e-06
Identities = 16/172 (9%), Positives = 35/172 (20%), Gaps = 45/172 (26%)
Query: 11 QGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAAD-----FQAKNNTRLISCAEDKTVR 65
++ E + + + V
Sbjct: 224 SSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVV 283
Query: 66 LWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQVH 125
+ D + K E G +S+ +S+D +
Sbjct: 284 VLDAKTGERLAKFEMGHEIDSINVSQDEKPL----------------------------- 314
Query: 126 SASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDG 177
++ D +Y D +G E+ S + + G
Sbjct: 315 -----------LYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 355
Score = 40.2 bits (92), Expect = 1e-04
Identities = 31/201 (15%), Positives = 53/201 (26%), Gaps = 22/201 (10%)
Query: 12 GDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSA 71
G+ G IG +G + + D S A + F +R+ V ++D
Sbjct: 35 GEAGRVIGMIDGGF--LPNPVVADDGSFIAHASTVF-----SRIARGERTDYVEVFDPVT 87
Query: 72 SAEVQKLEF--------GAVPNSLEISRDGTTITVTHGSCVTFLDANSLELIKEHKVPAQ 123
+E G P ++ DG T+ S K K
Sbjct: 88 LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP-APAVGVVDLEGKAFKRMLD 146
Query: 124 VHSASLLLNSERPIFVCGGEDLKMYKFDYSTGAEIESFK------GHFGPIHCVKFSPDG 177
V + + F D + K + T E I+ +S
Sbjct: 147 VPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKA 206
Query: 178 ELYASGSEDGTLRLWQTNVGK 198
+ G + + G
Sbjct: 207 GRLVWPTYTGKIHQIDLSSGD 227
Score = 33.6 bits (75), Expect = 0.015
Identities = 10/75 (13%), Positives = 17/75 (22%), Gaps = 12/75 (16%)
Query: 141 GGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYA----------SGSEDGTLR 190
+ + D G I G F P + DG A G +
Sbjct: 24 FAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVE 81
Query: 191 LWQTNVGKTYGLWKC 205
++ +
Sbjct: 82 VFDPVTLLPTADIEL 96
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 44.6 bits (104), Expect = 4e-06
Identities = 19/192 (9%), Positives = 40/192 (20%), Gaps = 29/192 (15%)
Query: 31 VDINKDASKAASGAADFQA--KNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLE 88
AA + S V A + + +
Sbjct: 162 TKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQ---NCSSQAAQ 218
Query: 89 ISRDGTTITVTHG------------SCVTFLDANSLELIKEHKVPAQVHSASLLLNSERP 136
+ G + + +D N ++ A + L +
Sbjct: 219 ANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKL-KNTDG 277
Query: 137 IFVCGGEDLKMYK--------FDYSTGAEIESFKGHFGPIHCVKFSPDGE--LYASGSED 186
I + E + S G + + DG YA+ +
Sbjct: 278 IMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG-HDSDAIIAAQDGASDNYANSAGT 336
Query: 187 GTLRLWQTNVGK 198
L ++ +
Sbjct: 337 EVLDIYDAASDQ 348
Score = 41.9 bits (97), Expect = 3e-05
Identities = 16/187 (8%), Positives = 32/187 (17%), Gaps = 26/187 (13%)
Query: 40 AASGAADFQAKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT 99
A + + T A + + + G+ +
Sbjct: 24 DHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSL-AVAGHSGSDFALA 82
Query: 100 HGS-----------CVTFLDANSLELIKEHKVPAQVHSASL-------LLNSERPIFVCG 141
S V D + I + ++P + S +
Sbjct: 83 STSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFL 142
Query: 142 GEDLKMYKFDYSTGAEIESFKG-------HFGPIHCVKFSPDGELYASGSEDGTLRLWQT 194
++ + K S L AS
Sbjct: 143 FGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIV 202
Query: 195 NVGKTYG 201
T
Sbjct: 203 GAQCTGA 209
Score = 39.6 bits (91), Expect = 2e-04
Identities = 11/125 (8%), Positives = 31/125 (24%), Gaps = 7/125 (5%)
Query: 12 GDTGDWIGTFEGHKGCVWGVDINKDASKAASGAAD----FQAKNNTRLISCAEDKTVRLW 67
+G++ + + + + A +
Sbjct: 240 AAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSV 299
Query: 68 DVSASAEVQKLEFGAVPNSLEISRDGTT---ITVTHGSCVTFLDANSLELIKEHKVPAQV 124
S + G +++ ++DG + + DA S + ++
Sbjct: 300 TASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGP 359
Query: 125 HSASL 129
S S+
Sbjct: 360 ESLSV 364
Score = 37.3 bits (85), Expect = 9e-04
Identities = 9/80 (11%), Positives = 23/80 (28%), Gaps = 14/80 (17%)
Query: 13 DTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSAS 72
G G + +D + + A + + ++D ++
Sbjct: 302 SVGQTSGPISNGHD-SDAIIAAQDGASDN-------------YANSAGTEVLDIYDAASD 347
Query: 73 AEVQKLEFGAVPNSLEISRD 92
+ +E P SL + +
Sbjct: 348 QDQSSVELDKGPESLSVQNE 367
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 44.1 bits (102), Expect = 5e-06
Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 3/59 (5%)
Query: 137 IFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHC--VKFSPDGELY-ASGSEDGTLRLW 192
F G D + +D +T ++ + + V G S S DGTL +
Sbjct: 265 KFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFY 323
Score = 41.4 bits (95), Expect = 4e-05
Identities = 17/69 (24%), Positives = 24/69 (34%), Gaps = 5/69 (7%)
Query: 137 IFVCGGEDLKMYKFDYSTG--AEIESFKGHFG-PIHCVKFSP--DGELYASGSEDGTLRL 191
I G+ + D + F GH + VKFSP + SG E G + +
Sbjct: 32 IAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIV 91
Query: 192 WQTNVGKTY 200
W K
Sbjct: 92 WGWTFDKES 100
Score = 35.7 bits (80), Expect = 0.003
Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 51 NNTRLISCAEDKTVRLWDVSASAEVQKLEF-----GAVPNSLEISRDGTTITVTHGSCVT 105
++ + + D T+R+WDV+ S VQK G + + +G I+++ +
Sbjct: 262 DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLN 321
Query: 106 FLD 108
F +
Sbjct: 322 FYE 324
Score = 34.1 bits (76), Expect = 0.012
Identities = 9/57 (15%), Positives = 19/57 (33%), Gaps = 12/57 (21%)
Query: 13 DTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDV 69
T + + K + + A N R+IS + D T+ +++
Sbjct: 281 TTSKCVQKWTLDKQQLGNQQVG------------VVATGNGRIISLSLDGTLNFYEL 325
Score = 30.7 bits (67), Expect = 0.13
Identities = 7/35 (20%), Positives = 12/35 (34%)
Query: 164 HFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198
D + +A+ D T+R+W K
Sbjct: 250 PVQGGIFALSWLDSQKFATVGADATIRVWDVTTSK 284
Score = 27.6 bits (59), Expect = 1.3
Identities = 4/35 (11%), Positives = 7/35 (20%), Gaps = 1/35 (2%)
Query: 166 GPIHCVKFSPDGELYASGSEDGT-LRLWQTNVGKT 199
+ + P A +R K
Sbjct: 18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKV 52
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 44.0 bits (102), Expect = 6e-06
Identities = 12/120 (10%), Positives = 32/120 (26%), Gaps = 5/120 (4%)
Query: 3 VDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDK 62
D K D + + G + +G
Sbjct: 217 KDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRS----PKDPNQIYGVLN 272
Query: 63 TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANSLELIKEHKVP 121
+ +D+ ++ + + G + + + + + ++LE +K K+P
Sbjct: 273 RLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 332
Score = 43.6 bits (101), Expect = 7e-06
Identities = 14/102 (13%), Positives = 34/102 (33%), Gaps = 2/102 (1%)
Query: 97 TVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYSTGA 156
T +D + + + + L + + P + G + ++ K+D
Sbjct: 225 TADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLN-RLAKYDLKQRK 283
Query: 157 EIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGK 198
I++ +CV F G+ G L ++ + +
Sbjct: 284 LIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 324
Score = 32.8 bits (73), Expect = 0.028
Identities = 3/51 (5%), Positives = 8/51 (15%)
Query: 171 VKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGLDSSGH 221
E + L + Y + + +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNR 52
Score = 30.1 bits (66), Expect = 0.21
Identities = 7/86 (8%), Positives = 19/86 (22%), Gaps = 16/86 (18%)
Query: 2 CVDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAED 61
V + I + V +K +L
Sbjct: 269 GVLNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKK---------------GDKLYLGGTF 312
Query: 62 KTVRLWDVSASAEVQKLEFGAVPNSL 87
+ +++ +V+ ++ S
Sbjct: 313 NDLAVFNPDTLEKVKNIKLPGGDMST 338
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 42.5 bits (98), Expect = 2e-05
Identities = 11/90 (12%), Positives = 28/90 (31%), Gaps = 5/90 (5%)
Query: 137 IFVCGGED--LKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGE-LYASGSEDGTLRLW- 192
+++ E + ++ ++ + G + + SPD LY + + +
Sbjct: 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYR 65
Query: 193 -QTNVGKTYGLWKCIEGGLNNSLGLDSSGH 221
+ G + G + D G
Sbjct: 66 IAPDDGALTFAAESALPGSLTHISTDHQGQ 95
Score = 35.6 bits (80), Expect = 0.004
Identities = 7/50 (14%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
Query: 56 ISCAEDKTVRLWDVSASAE---VQKLEFGAVPNSLEISRDGTTITVTHGS 102
I+ E + + +W+++ Q ++ + +S D + V
Sbjct: 8 IASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRP 57
Score = 31.7 bits (70), Expect = 0.060
Identities = 12/106 (11%), Positives = 33/106 (31%), Gaps = 4/106 (3%)
Query: 95 TITVTHGSCVTFLDANSLELIKEHKVPAQVHSASLLLNSERPIFVCGGEDLKMYKFDYST 154
+ +L+++ E+ + + + R ++ C + F S
Sbjct: 202 DVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSE 261
Query: 155 GAEIESFKGHF---GPIHCVKFSPDGE-LYASGSEDGTLRLWQTNV 196
+ S +G G+ L A+G + + +++
Sbjct: 262 DGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG 307
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus
[TaxId: 1280]}
Length = 319
Score = 31.6 bits (70), Expect = 0.065
Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 6/121 (4%)
Query: 102 SCVTFLDANSLELIKEHKVPAQVHSASLLL-----NSERPIFVCGGEDLKMYKFDYSTGA 156
S V + + L+ I ++ L L + + +F+ + ++K + T
Sbjct: 14 SAVPIISESELQTITAEPW-LEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE 72
Query: 157 EIESFKGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTNVGKTYGLWKCIEGGLNNSLGL 216
F H +K DG L+ D + + I L+ + +
Sbjct: 73 IKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCI 132
Query: 217 D 217
D
Sbjct: 133 D 133
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 28.5 bits (62), Expect = 0.61
Identities = 10/59 (16%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
Query: 137 IFVCGGEDLKMYKFDYSTGAEIESF--KGHFGPIHCVKFSPDGELYASGSEDGTLRLWQ 193
+ + + F G I + K V DG + + S+D L +++
Sbjct: 214 LIADNHNNFNLTIFT-QDGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYR 270
Score = 25.4 bits (54), Expect = 6.9
Identities = 3/34 (8%), Positives = 14/34 (41%)
Query: 162 KGHFGPIHCVKFSPDGELYASGSEDGTLRLWQTN 195
+G F V + ++ + + + ++++
Sbjct: 19 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE 52
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 28.2 bits (61), Expect = 1.1
Identities = 12/79 (15%), Positives = 26/79 (32%), Gaps = 11/79 (13%)
Query: 148 YKFDYSTGAEI-----ESFKGHFGPIHCVKFSPDGE--LYASGSEDGTLRLWQTNVGKTY 200
F+ G +F I+ SPDG+ L + W+ + +Y
Sbjct: 39 LVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYV----KQWRHSYTASY 94
Query: 201 GLWKCIEGGLNNSLGLDSS 219
++ + L + ++
Sbjct: 95 DIYDLNKRQLITEERIPNN 113
Score = 26.2 bits (56), Expect = 4.3
Identities = 11/59 (18%), Positives = 17/59 (28%), Gaps = 7/59 (11%)
Query: 148 YKFDYSTGAEIE----SFKGHFGPIHCVKFSPDGELYA---SGSEDGTLRLWQTNVGKT 199
YK S ++ + V FS + + Y SG L + K
Sbjct: 394 YKIQLSDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKG 452
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue
{Nostoc punctiforme [TaxId: 272131]}
Length = 302
Score = 27.7 bits (60), Expect = 1.2
Identities = 5/28 (17%), Positives = 13/28 (46%)
Query: 168 IHCVKFSPDGELYASGSEDGTLRLWQTN 195
+ + +PDG ++ + E G + +
Sbjct: 30 LENLASAPDGTIFVTNHEVGEIVSITPD 57
>d1ytla1 c.31.1.6 (A:17-174) Acetyl-CoA decarbonylase/synthase
complex epsilon subunit 2, ACDE2 {Archaeoglobus fulgidus
[TaxId: 2234]}
Length = 158
Score = 26.5 bits (58), Expect = 1.9
Identities = 8/34 (23%), Positives = 15/34 (44%), Gaps = 8/34 (23%)
Query: 109 ANSLELIKEHKVPAQVHSASLLLNSERPIFVCGG 142
A LE K A+++ ++RP+ + G
Sbjct: 3 ATLLEKGKP--------VANMIKKAKRPLLIVGP 28
>d1t9ba1 c.31.1.3 (A:290-460) Acetohydroxyacid synthase catalytic
subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 171
Score = 26.5 bits (57), Expect = 2.0
Identities = 4/16 (25%), Positives = 9/16 (56%)
Query: 127 ASLLLNSERPIFVCGG 142
A L+ +++P+ G
Sbjct: 4 ADLINLAKKPVLYVGA 19
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase
(phosphotriesterase, DFP) {Squid (Loligo vulgaris)
[TaxId: 6622]}
Length = 314
Score = 26.9 bits (58), Expect = 2.3
Identities = 7/54 (12%), Positives = 16/54 (29%), Gaps = 1/54 (1%)
Query: 137 IFVCGGEDLKMYKFDYSTGAEIESFKGHFGPIHCVKFSPDG-ELYASGSEDGTL 189
+ V + F G + F + F P ++ + E+ +
Sbjct: 239 LLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAV 292
>d1f32a_ d.62.1.1 (A:) Pepsin inhibitor-3 {Pig roundworm (Ascaris
suum) [TaxId: 6253]}
Length = 147
Score = 26.1 bits (57), Expect = 2.3
Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 14/71 (19%)
Query: 93 GTTITVTHGSCVTFLDANSLELIKEHKVPAQ------VHSASLLLNS------ERPIFVC 140
G I + F+ +++ + V + + + + P F C
Sbjct: 8 GPFICTVKDN-QVFVANLPWTMLEGDDIQVGKEFAARVEDCTNVKHDMAPTCTKPPPF-C 65
Query: 141 GGEDLKMYKFD 151
G +D+KM+ F
Sbjct: 66 GPQDMKMFNFV 76
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 260
Score = 26.4 bits (56), Expect = 2.8
Identities = 4/45 (8%), Positives = 11/45 (24%)
Query: 146 KMYKFDYSTGAEIESFKGHFGPIHCVKFSPDGELYASGSEDGTLR 190
++ K + V D +Y + + +
Sbjct: 204 QVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV 248
>d1ozha1 c.31.1.3 (A:188-366) Catabolic acetolactate synthase
{Klebsiella pneumoniae [TaxId: 573]}
Length = 179
Score = 26.0 bits (56), Expect = 2.9
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 127 ASLLLNSERPIFVCGG 142
A L+ ++ PIF+ G
Sbjct: 14 AKLIAQAKNPIFLLGL 29
>d1wgoa_ b.1.3.1 (A:) VPS10 domain-containing receptor SorCS2 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 123
Score = 25.4 bits (55), Expect = 3.3
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 75 VQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLD 108
VQ P L++S G + V G V F+
Sbjct: 19 VQLQCPLTPPRGLQVSIQGEAVAVRPGEDVLFVV 52
>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase
{Streptomyces clavuligerus [TaxId: 1901]}
Length = 177
Score = 25.7 bits (55), Expect = 3.6
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 127 ASLLLNSERPIFVCGG 142
A+LL ++ P+ V G
Sbjct: 13 AALLAEAKHPVLVVGA 28
>d1c8ua2 d.38.1.3 (A:116-286) Thioesterase II (TesB) {Escherichia
coli [TaxId: 562]}
Length = 171
Score = 26.0 bits (56), Expect = 3.7
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 173 FSPDGELYASGSEDGTLRL 191
++ DG L AS ++G +R
Sbjct: 151 YTQDGVLVASTVQEGVMRN 169
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic
subunit {Thale cress (Arabidopsis thaliana), chloroplast
[TaxId: 3702]}
Length = 179
Score = 25.7 bits (55), Expect = 3.7
Identities = 5/16 (31%), Positives = 9/16 (56%)
Query: 127 ASLLLNSERPIFVCGG 142
L+ S++P+ GG
Sbjct: 13 VRLISESKKPVLYVGG 28
>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase
{Pseudomonas putida [TaxId: 303]}
Length = 160
Score = 25.6 bits (55), Expect = 4.1
Identities = 4/16 (25%), Positives = 6/16 (37%)
Query: 127 ASLLLNSERPIFVCGG 142
L ++ P V G
Sbjct: 13 VKALNSASNPAIVLGP 28
>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter
formigenes [TaxId: 847]}
Length = 175
Score = 25.7 bits (55), Expect = 4.4
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 127 ASLLLNSERPIFVCGG 142
A L+ N++RP+ + G
Sbjct: 13 ADLIKNAKRPVIMLGK 28
>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans
[TaxId: 1377]}
Length = 177
Score = 25.4 bits (54), Expect = 4.8
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 127 ASLLLNSERPIFVCGG 142
LL NS+RP+ G
Sbjct: 15 VELLNNSKRPVIYAGI 30
>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus
plantarum [TaxId: 1590]}
Length = 183
Score = 25.4 bits (54), Expect = 4.9
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 127 ASLLLNSERPIFVCGG 142
LL +ERP+ G
Sbjct: 24 TQTLLAAERPLIYYGI 39
>d1zpda1 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymomonas
mobilis [TaxId: 542]}
Length = 175
Score = 25.2 bits (54), Expect = 5.5
Identities = 2/16 (12%), Positives = 6/16 (37%)
Query: 127 ASLLLNSERPIFVCGG 142
+ N ++ + G
Sbjct: 16 LKFIANRDKVAVLVGS 31
>d1ky9a1 b.36.1.4 (A:260-353) Protease Do (DegP, HtrA), C-terminal
domains {Escherichia coli [TaxId: 562]}
Length = 94
Score = 23.9 bits (51), Expect = 9.2
Identities = 16/87 (18%), Positives = 28/87 (32%), Gaps = 10/87 (11%)
Query: 13 DTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKNNTRLISCAEDKTVRLWDVSAS 72
+ + V V N A+KA A D N + IS ++ +
Sbjct: 16 ELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVG 75
Query: 73 AEVQKLEFGAVPNSLEISRDGTTITVT 99
+++ L + RDG + V
Sbjct: 76 SKLT----------LGLLRDGKQVNVN 92
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.134 0.413
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 851,475
Number of extensions: 36184
Number of successful extensions: 389
Number of sequences better than 10.0: 1
Number of HSP's gapped: 307
Number of HSP's successfully gapped: 157
Length of query: 231
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 149
Effective length of database: 1,281,736
Effective search space: 190978664
Effective search space used: 190978664
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.2 bits)