Query psy6444
Match_columns 88
No_of_seqs 100 out of 1048
Neff 11.6
Searched_HMMs 46136
Date Fri Aug 16 18:04:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6444.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6444hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0271|consensus 99.8 3.6E-19 7.9E-24 100.9 8.1 78 8-88 108-185 (480)
2 KOG0263|consensus 99.8 6.2E-19 1.3E-23 105.8 8.8 83 3-88 565-647 (707)
3 KOG0271|consensus 99.8 2E-18 4.4E-23 97.9 7.0 83 3-88 145-233 (480)
4 KOG0266|consensus 99.8 2.9E-17 6.3E-22 96.9 11.3 82 4-88 235-316 (456)
5 KOG0263|consensus 99.8 3.8E-18 8.3E-23 102.5 7.2 81 5-88 525-605 (707)
6 KOG0286|consensus 99.7 4.1E-17 8.8E-22 90.0 9.3 84 3-88 174-257 (343)
7 KOG0272|consensus 99.7 7.7E-18 1.7E-22 96.1 6.6 81 5-88 293-373 (459)
8 KOG0279|consensus 99.7 7.1E-17 1.5E-21 88.5 8.8 82 4-88 52-133 (315)
9 PTZ00421 coronin; Provisional 99.7 4.3E-16 9.2E-21 92.6 11.3 81 6-88 116-196 (493)
10 KOG0295|consensus 99.7 2.7E-16 5.8E-21 88.7 8.9 84 5-88 267-362 (406)
11 KOG0318|consensus 99.7 1E-15 2.2E-20 89.7 10.2 79 7-88 182-263 (603)
12 KOG0272|consensus 99.7 5.3E-16 1.1E-20 88.8 7.9 82 4-88 334-416 (459)
13 KOG0266|consensus 99.7 1.6E-15 3.5E-20 89.7 9.4 79 7-88 195-274 (456)
14 KOG0316|consensus 99.6 2E-15 4.4E-20 81.6 7.9 83 3-88 47-129 (307)
15 KOG0643|consensus 99.6 5.3E-15 1.1E-19 81.1 8.8 76 10-88 5-80 (327)
16 KOG0319|consensus 99.6 5.7E-15 1.2E-19 89.1 9.6 82 4-88 494-575 (775)
17 PTZ00421 coronin; Provisional 99.6 2E-14 4.3E-19 85.6 10.7 77 10-88 70-154 (493)
18 KOG0303|consensus 99.6 4.8E-15 1E-19 84.7 7.7 82 4-88 120-201 (472)
19 KOG0291|consensus 99.6 1.2E-14 2.6E-19 88.3 9.5 79 7-88 342-420 (893)
20 PTZ00420 coronin; Provisional 99.6 4.8E-14 1E-18 85.0 11.8 81 6-88 65-154 (568)
21 KOG0284|consensus 99.6 3.3E-15 7.2E-20 85.4 6.2 80 6-88 213-292 (464)
22 KOG0283|consensus 99.6 3.8E-15 8.3E-20 90.3 6.5 79 5-88 359-438 (712)
23 KOG1445|consensus 99.6 1.7E-15 3.7E-20 91.0 4.8 81 6-88 668-748 (1012)
24 KOG0277|consensus 99.6 9.5E-15 2.1E-19 79.6 7.2 83 4-88 93-176 (311)
25 KOG1034|consensus 99.6 1.1E-14 2.3E-19 81.7 7.4 83 4-88 124-209 (385)
26 KOG0282|consensus 99.6 8.5E-16 1.8E-20 89.0 3.1 83 4-88 203-286 (503)
27 KOG0264|consensus 99.6 2.1E-14 4.5E-19 82.5 8.6 82 5-88 262-345 (422)
28 KOG0279|consensus 99.6 5.9E-14 1.3E-18 77.2 9.7 82 3-88 93-178 (315)
29 KOG0315|consensus 99.6 6.6E-14 1.4E-18 76.3 9.4 81 5-88 205-286 (311)
30 KOG0285|consensus 99.6 3.4E-14 7.4E-19 80.6 8.3 81 5-88 141-221 (460)
31 KOG0292|consensus 99.6 6.6E-15 1.4E-19 90.8 5.9 80 6-88 42-121 (1202)
32 PTZ00420 coronin; Provisional 99.6 1.5E-13 3.3E-18 82.9 11.2 78 7-88 117-195 (568)
33 KOG0285|consensus 99.6 1.6E-14 3.4E-19 81.9 6.6 84 2-88 180-263 (460)
34 KOG0265|consensus 99.6 5.7E-14 1.2E-18 77.9 8.6 80 6-88 38-118 (338)
35 KOG0315|consensus 99.6 6.1E-14 1.3E-18 76.4 8.5 81 4-88 72-152 (311)
36 KOG0273|consensus 99.6 3.9E-14 8.5E-19 82.3 8.1 81 5-88 349-438 (524)
37 KOG0645|consensus 99.5 2.2E-13 4.8E-18 74.8 9.9 80 6-88 96-178 (312)
38 KOG0316|consensus 99.5 8.5E-14 1.8E-18 75.5 8.2 82 4-88 6-87 (307)
39 KOG0265|consensus 99.5 7.5E-14 1.6E-18 77.5 7.8 78 8-88 83-161 (338)
40 KOG0645|consensus 99.5 2.1E-13 4.6E-18 74.9 9.3 73 13-88 59-133 (312)
41 KOG0273|consensus 99.5 2E-13 4.2E-18 79.5 9.1 82 4-88 265-387 (524)
42 KOG0286|consensus 99.5 5.8E-13 1.2E-17 73.9 10.3 79 7-88 47-125 (343)
43 KOG0276|consensus 99.5 3.3E-14 7.1E-19 85.2 5.8 83 5-88 173-255 (794)
44 KOG0284|consensus 99.5 1.7E-14 3.7E-19 82.6 4.3 79 7-88 171-250 (464)
45 KOG0302|consensus 99.5 7.2E-14 1.6E-18 79.5 6.4 78 9-88 251-330 (440)
46 KOG0292|consensus 99.5 1.7E-13 3.8E-18 84.8 8.4 82 4-88 82-163 (1202)
47 KOG0276|consensus 99.5 2.8E-13 6.1E-18 81.3 8.7 81 6-88 131-213 (794)
48 KOG1407|consensus 99.5 9.9E-14 2.2E-18 75.9 6.3 79 5-86 179-257 (313)
49 KOG0277|consensus 99.5 7.6E-13 1.7E-17 72.4 9.3 84 3-88 135-219 (311)
50 KOG0278|consensus 99.5 1.7E-13 3.7E-18 74.9 6.8 69 17-88 226-295 (334)
51 KOG0295|consensus 99.5 1.4E-12 3E-17 74.1 9.9 84 2-88 321-404 (406)
52 KOG0973|consensus 99.5 3.2E-13 6.9E-18 84.0 7.9 80 6-88 120-199 (942)
53 KOG0281|consensus 99.5 2.1E-14 4.5E-19 81.4 2.5 79 3-88 348-426 (499)
54 KOG0319|consensus 99.5 4.8E-13 1E-17 81.1 8.3 82 4-88 536-617 (775)
55 KOG0281|consensus 99.5 1.4E-13 3E-18 78.2 5.6 76 6-88 228-303 (499)
56 KOG0296|consensus 99.5 1.4E-12 3E-17 74.1 9.0 81 5-88 54-134 (399)
57 cd00200 WD40 WD40 domain, foun 99.5 1.9E-12 4.2E-17 70.8 9.5 78 8-88 2-79 (289)
58 KOG0291|consensus 99.5 8.1E-13 1.8E-17 80.6 8.4 82 3-88 466-548 (893)
59 KOG0647|consensus 99.5 1E-12 2.3E-17 73.1 8.1 76 9-88 66-143 (347)
60 KOG0282|consensus 99.5 2.1E-13 4.6E-18 79.4 5.4 81 4-88 247-328 (503)
61 KOG1273|consensus 99.4 5.1E-13 1.1E-17 75.0 6.3 68 18-88 26-93 (405)
62 KOG0264|consensus 99.4 7.2E-13 1.6E-17 76.4 7.1 81 6-88 218-301 (422)
63 KOG0278|consensus 99.4 2.5E-13 5.4E-18 74.3 5.0 83 6-88 5-87 (334)
64 KOG0294|consensus 99.4 2.1E-12 4.5E-17 72.3 8.3 82 4-88 72-155 (362)
65 KOG0289|consensus 99.4 1.4E-12 3E-17 75.5 7.6 70 16-88 348-417 (506)
66 PLN00181 protein SPA1-RELATED; 99.4 1E-11 2.2E-16 77.8 11.8 82 4-88 564-646 (793)
67 KOG0275|consensus 99.4 1.5E-13 3.2E-18 77.6 3.4 81 5-88 295-376 (508)
68 KOG0642|consensus 99.4 3.5E-12 7.5E-17 75.6 9.0 82 4-88 333-424 (577)
69 KOG0269|consensus 99.4 5.4E-13 1.2E-17 81.3 5.7 80 7-88 168-248 (839)
70 KOG0310|consensus 99.4 1.4E-12 3.1E-17 76.0 7.1 80 7-88 102-182 (487)
71 KOG0308|consensus 99.4 2.9E-12 6.3E-17 77.1 8.5 81 5-88 160-241 (735)
72 KOG0313|consensus 99.4 3.9E-12 8.4E-17 72.6 8.5 80 4-88 249-328 (423)
73 cd00200 WD40 WD40 domain, foun 99.4 1.8E-11 3.9E-16 66.9 11.0 81 5-88 209-289 (289)
74 KOG4283|consensus 99.4 2.8E-12 6E-17 71.6 7.6 84 3-88 176-274 (397)
75 KOG0313|consensus 99.4 4.3E-12 9.4E-17 72.4 8.4 79 6-87 336-415 (423)
76 KOG0301|consensus 99.4 4.6E-12 1E-16 76.6 8.7 80 4-88 168-247 (745)
77 KOG0293|consensus 99.4 2.6E-12 5.7E-17 74.2 7.2 79 7-88 216-297 (519)
78 KOG0268|consensus 99.4 6.5E-13 1.4E-17 75.5 4.7 83 3-88 260-343 (433)
79 PLN00181 protein SPA1-RELATED; 99.4 1.2E-11 2.7E-16 77.4 10.2 72 15-88 532-604 (793)
80 KOG0302|consensus 99.4 8.4E-12 1.8E-16 71.3 8.5 80 6-88 293-376 (440)
81 KOG0274|consensus 99.4 1.5E-11 3.3E-16 74.1 9.7 79 4-88 320-398 (537)
82 KOG0283|consensus 99.4 8.2E-12 1.8E-16 76.3 8.5 79 6-88 401-479 (712)
83 KOG2394|consensus 99.4 1.7E-12 3.8E-17 76.8 5.3 78 7-87 282-359 (636)
84 KOG1332|consensus 99.4 1E-11 2.2E-16 67.8 7.4 80 6-87 47-131 (299)
85 KOG1539|consensus 99.3 1.1E-11 2.3E-16 76.4 8.1 80 4-87 565-645 (910)
86 KOG0973|consensus 99.3 1.5E-11 3.3E-16 76.9 8.9 81 5-88 59-157 (942)
87 KOG0294|consensus 99.3 9.3E-12 2E-16 69.8 7.2 77 7-88 35-113 (362)
88 KOG0267|consensus 99.3 2.9E-12 6.2E-17 77.9 5.4 81 5-88 102-182 (825)
89 KOG0293|consensus 99.3 9.3E-12 2E-16 72.0 7.0 80 6-88 260-340 (519)
90 KOG0306|consensus 99.3 1.3E-11 2.8E-16 75.5 7.9 80 6-88 541-620 (888)
91 KOG0305|consensus 99.3 3E-11 6.5E-16 71.6 9.2 82 5-88 333-459 (484)
92 KOG0640|consensus 99.3 6.1E-12 1.3E-16 70.7 5.5 80 6-88 163-289 (430)
93 KOG1446|consensus 99.3 5.9E-11 1.3E-15 66.3 9.3 80 4-88 89-168 (311)
94 KOG0275|consensus 99.3 9.9E-13 2.1E-17 74.3 2.4 71 14-87 262-333 (508)
95 KOG0305|consensus 99.3 6.8E-12 1.5E-16 74.3 5.9 76 10-88 296-374 (484)
96 KOG1310|consensus 99.3 1.7E-11 3.6E-16 73.2 7.3 77 9-88 44-123 (758)
97 KOG0303|consensus 99.3 5.2E-12 1.1E-16 72.6 4.9 77 10-88 76-160 (472)
98 KOG0274|consensus 99.3 1E-10 2.2E-15 70.7 10.6 80 4-88 237-317 (537)
99 KOG0296|consensus 99.3 8.4E-11 1.8E-15 67.0 9.5 72 14-88 147-218 (399)
100 KOG1539|consensus 99.3 6.3E-11 1.4E-15 73.1 9.6 81 5-88 480-604 (910)
101 KOG0306|consensus 99.3 2.1E-11 4.6E-16 74.6 6.8 80 6-88 583-662 (888)
102 KOG0318|consensus 99.3 8.2E-11 1.8E-15 69.7 9.0 78 8-88 480-558 (603)
103 KOG0300|consensus 99.3 2.2E-11 4.7E-16 68.9 6.1 81 5-88 262-342 (481)
104 KOG0639|consensus 99.3 1.3E-11 2.8E-16 73.0 5.4 68 18-88 512-579 (705)
105 KOG0646|consensus 99.3 1.5E-11 3.3E-16 71.5 5.5 71 15-88 81-151 (476)
106 PF00400 WD40: WD domain, G-be 99.2 1.1E-10 2.4E-15 47.1 6.0 39 5-46 1-39 (39)
107 KOG1274|consensus 99.2 1.3E-10 2.9E-15 72.2 8.7 82 4-88 127-260 (933)
108 KOG0772|consensus 99.2 3.6E-11 7.8E-16 71.2 5.6 71 15-88 317-392 (641)
109 KOG2111|consensus 99.2 7.3E-10 1.6E-14 62.4 10.4 76 9-87 175-253 (346)
110 KOG1446|consensus 99.2 6.3E-10 1.4E-14 62.3 10.1 83 3-88 44-128 (311)
111 KOG0267|consensus 99.2 2.5E-11 5.4E-16 74.0 4.8 80 6-88 145-224 (825)
112 KOG0299|consensus 99.2 1E-10 2.3E-15 68.1 7.2 74 12-88 199-272 (479)
113 PF00400 WD40: WD domain, G-be 99.2 5.7E-11 1.2E-15 48.0 4.6 38 51-88 2-39 (39)
114 KOG0640|consensus 99.2 5.6E-11 1.2E-15 67.0 5.8 74 12-88 258-333 (430)
115 KOG0270|consensus 99.2 2.3E-11 5E-16 70.5 4.4 76 11-88 239-315 (463)
116 KOG4283|consensus 99.2 2.3E-10 5E-15 64.2 8.1 73 16-88 144-217 (397)
117 KOG0308|consensus 99.2 4.5E-10 9.8E-15 68.0 9.6 80 4-86 202-281 (735)
118 KOG2110|consensus 99.2 1.3E-09 2.7E-14 62.4 10.7 80 5-87 163-245 (391)
119 KOG0646|consensus 99.2 1.8E-10 4E-15 67.2 7.4 83 3-88 111-204 (476)
120 KOG2096|consensus 99.2 1.4E-10 3E-15 65.6 6.6 81 5-88 218-306 (420)
121 KOG1009|consensus 99.2 2.1E-10 4.5E-15 66.1 7.4 79 7-88 57-151 (434)
122 KOG1063|consensus 99.2 1.7E-10 3.6E-15 70.2 7.1 79 6-87 563-645 (764)
123 KOG0269|consensus 99.2 6.6E-11 1.4E-15 72.5 5.5 82 5-88 123-205 (839)
124 KOG1007|consensus 99.2 1.8E-10 3.9E-15 64.4 6.5 74 13-88 212-287 (370)
125 KOG0647|consensus 99.2 1.5E-10 3.3E-15 64.7 6.2 72 15-88 27-100 (347)
126 KOG0322|consensus 99.2 8.2E-11 1.8E-15 64.9 4.9 69 17-88 253-321 (323)
127 KOG0310|consensus 99.2 1.1E-09 2.4E-14 64.3 9.3 77 8-88 146-223 (487)
128 KOG0650|consensus 99.1 1.5E-09 3.2E-14 65.5 9.9 64 6-73 391-454 (733)
129 KOG0772|consensus 99.1 1.5E-10 3.3E-15 68.7 5.5 77 10-88 263-345 (641)
130 KOG2445|consensus 99.1 7.4E-10 1.6E-14 62.3 7.7 81 7-88 215-316 (361)
131 KOG0300|consensus 99.1 1.9E-10 4E-15 65.2 5.3 78 7-87 140-217 (481)
132 KOG0643|consensus 99.1 1E-09 2.2E-14 60.8 7.8 81 5-88 137-218 (327)
133 KOG2445|consensus 99.1 2.3E-09 4.9E-14 60.4 9.1 74 12-88 10-89 (361)
134 KOG0641|consensus 99.1 2.8E-09 6E-14 58.2 8.6 70 16-88 232-301 (350)
135 KOG0288|consensus 99.1 9.6E-10 2.1E-14 63.7 7.1 68 18-88 390-459 (459)
136 KOG0301|consensus 99.1 4.3E-10 9.3E-15 68.4 5.6 76 6-88 131-206 (745)
137 KOG0268|consensus 99.0 2.1E-10 4.6E-15 65.6 3.1 76 8-87 59-134 (433)
138 KOG0974|consensus 99.0 4E-09 8.6E-14 66.4 8.8 74 10-88 170-244 (967)
139 KOG1332|consensus 99.0 1.6E-09 3.4E-14 59.4 5.6 75 11-88 7-86 (299)
140 KOG0289|consensus 99.0 9.7E-09 2.1E-13 60.1 9.1 76 10-88 298-375 (506)
141 KOG1407|consensus 99.0 5.2E-09 1.1E-13 57.9 7.6 76 10-88 59-134 (313)
142 KOG0641|consensus 99.0 1.4E-08 2.9E-13 55.6 8.9 81 4-88 172-259 (350)
143 KOG0639|consensus 99.0 8.2E-10 1.8E-14 65.7 4.4 82 3-87 539-660 (705)
144 KOG0288|consensus 99.0 3.4E-10 7.3E-15 65.5 2.7 79 7-88 211-289 (459)
145 KOG1408|consensus 99.0 6.1E-09 1.3E-13 64.4 7.9 83 3-88 626-711 (1080)
146 KOG0644|consensus 99.0 1.6E-10 3.4E-15 71.8 1.2 78 4-88 221-298 (1113)
147 PF08662 eIF2A: Eukaryotic tra 99.0 3E-08 6.5E-13 53.3 9.7 69 15-88 100-177 (194)
148 KOG0321|consensus 99.0 1.6E-09 3.6E-14 65.6 5.3 77 9-88 94-173 (720)
149 KOG1063|consensus 99.0 3.2E-09 7E-14 64.8 6.6 78 8-88 518-600 (764)
150 KOG2919|consensus 99.0 5.6E-09 1.2E-13 59.3 7.0 82 4-88 239-325 (406)
151 KOG2048|consensus 99.0 2.5E-08 5.5E-13 60.8 9.9 83 3-88 98-182 (691)
152 KOG0299|consensus 98.9 2.1E-09 4.6E-14 62.9 5.0 82 4-88 233-314 (479)
153 KOG1274|consensus 98.9 1.6E-08 3.5E-13 63.3 8.6 71 15-88 96-166 (933)
154 KOG1524|consensus 98.9 2.6E-09 5.7E-14 64.0 5.1 81 5-88 94-214 (737)
155 KOG1036|consensus 98.9 2.2E-08 4.7E-13 56.3 8.3 72 12-88 51-122 (323)
156 PF08662 eIF2A: Eukaryotic tra 98.9 5E-08 1.1E-12 52.4 9.4 68 15-88 59-131 (194)
157 KOG1445|consensus 98.9 9.9E-09 2.1E-13 62.9 7.2 73 13-88 126-198 (1012)
158 KOG0771|consensus 98.9 4.1E-09 8.8E-14 60.9 5.1 66 19-88 148-213 (398)
159 KOG0290|consensus 98.9 5.3E-08 1.1E-12 54.8 8.9 79 7-88 188-316 (364)
160 KOG1538|consensus 98.9 3.6E-09 7.8E-14 65.0 4.6 44 2-48 40-83 (1081)
161 KOG4328|consensus 98.9 9.3E-09 2E-13 60.3 6.0 82 5-88 312-397 (498)
162 KOG0307|consensus 98.9 5.3E-09 1.1E-13 66.4 4.7 81 5-87 243-324 (1049)
163 KOG0649|consensus 98.9 4.6E-08 9.9E-13 54.0 7.7 68 18-88 117-184 (325)
164 KOG0642|consensus 98.8 1.5E-08 3.2E-13 60.7 5.7 79 7-88 286-372 (577)
165 KOG2139|consensus 98.8 1.1E-07 2.3E-12 55.0 8.8 77 8-88 189-266 (445)
166 COG2319 FOG: WD40 repeat [Gene 98.8 2.8E-07 6.1E-12 52.6 10.7 80 6-88 146-227 (466)
167 KOG1272|consensus 98.8 2.9E-09 6.2E-14 62.7 2.4 82 4-88 240-321 (545)
168 KOG0270|consensus 98.8 9.3E-08 2E-12 56.0 8.4 85 2-88 273-358 (463)
169 KOG1538|consensus 98.8 5.3E-08 1.1E-12 60.1 7.1 67 17-88 14-81 (1081)
170 KOG0644|consensus 98.8 2.1E-09 4.5E-14 67.1 0.6 79 7-88 182-260 (1113)
171 KOG2106|consensus 98.7 4.4E-07 9.6E-12 54.4 9.9 73 11-88 443-519 (626)
172 KOG3881|consensus 98.7 2.1E-07 4.6E-12 53.9 8.2 81 5-88 237-318 (412)
173 KOG1036|consensus 98.7 4.4E-08 9.6E-13 55.1 5.4 60 17-79 234-293 (323)
174 KOG0307|consensus 98.7 7.7E-09 1.7E-13 65.7 2.7 80 7-88 108-190 (1049)
175 KOG1034|consensus 98.7 1.3E-07 2.9E-12 53.9 6.6 75 14-88 88-164 (385)
176 KOG0650|consensus 98.7 4.5E-08 9.7E-13 59.4 5.0 82 4-88 639-733 (733)
177 KOG0321|consensus 98.7 5.6E-08 1.2E-12 59.2 5.3 77 10-88 139-246 (720)
178 KOG2394|consensus 98.7 1.9E-07 4.1E-12 56.2 7.3 53 14-69 331-383 (636)
179 KOG1408|consensus 98.7 1.2E-07 2.7E-12 58.9 6.7 75 11-88 74-152 (1080)
180 KOG1409|consensus 98.7 1.3E-07 2.9E-12 54.2 6.4 81 5-88 187-268 (404)
181 KOG1188|consensus 98.7 2.3E-07 5E-12 53.1 7.2 83 4-88 59-194 (376)
182 KOG1273|consensus 98.7 1.6E-07 3.5E-12 53.5 6.5 64 6-73 56-119 (405)
183 KOG2110|consensus 98.7 6.1E-07 1.3E-11 51.8 8.8 60 28-87 139-201 (391)
184 KOG0280|consensus 98.7 3.5E-07 7.5E-12 51.6 7.5 79 8-88 158-239 (339)
185 KOG0290|consensus 98.7 3.1E-07 6.8E-12 51.8 7.3 73 14-88 149-225 (364)
186 KOG4328|consensus 98.7 4.5E-07 9.7E-12 53.6 8.1 77 10-88 181-263 (498)
187 KOG1009|consensus 98.7 4.8E-08 1E-12 56.7 4.1 75 6-83 114-188 (434)
188 KOG2096|consensus 98.6 6.8E-07 1.5E-11 51.1 8.1 72 13-88 185-256 (420)
189 PF11768 DUF3312: Protein of u 98.6 7.3E-07 1.6E-11 54.0 8.3 70 14-88 258-327 (545)
190 KOG2055|consensus 98.6 1.2E-06 2.7E-11 51.9 9.0 70 15-88 344-415 (514)
191 KOG2048|consensus 98.6 2.8E-06 6.1E-11 52.3 10.6 75 8-86 61-136 (691)
192 KOG2919|consensus 98.6 6.9E-07 1.5E-11 51.1 7.5 72 15-88 207-279 (406)
193 KOG1523|consensus 98.6 6.7E-07 1.5E-11 50.9 7.4 80 5-87 45-127 (361)
194 KOG1310|consensus 98.6 2.9E-07 6.3E-12 55.8 6.2 77 10-88 88-176 (758)
195 TIGR03866 PQQ_ABC_repeats PQQ- 98.6 3E-06 6.5E-11 47.4 10.0 80 4-88 20-101 (300)
196 COG2319 FOG: WD40 repeat [Gene 98.6 4.4E-06 9.6E-11 47.7 10.8 80 5-88 188-269 (466)
197 KOG4714|consensus 98.6 5.2E-08 1.1E-12 54.1 2.6 70 17-88 181-252 (319)
198 KOG4227|consensus 98.5 4.8E-07 1E-11 53.0 6.1 77 9-88 50-133 (609)
199 KOG1524|consensus 98.5 4.8E-07 1E-11 54.7 6.0 73 8-84 179-280 (737)
200 KOG3914|consensus 98.5 4E-07 8.7E-12 52.8 5.4 76 9-88 145-221 (390)
201 KOG1240|consensus 98.5 1.9E-06 4.2E-11 56.2 8.7 82 4-87 1037-1125(1431)
202 smart00320 WD40 WD40 repeats. 98.5 1.5E-06 3.3E-11 33.5 5.7 37 52-88 4-40 (40)
203 KOG1272|consensus 98.5 3.1E-07 6.8E-12 54.5 4.8 79 3-87 281-359 (545)
204 KOG0649|consensus 98.5 5.2E-06 1.1E-10 46.1 9.1 79 3-87 144-232 (325)
205 KOG1007|consensus 98.4 6.5E-07 1.4E-11 50.6 4.9 72 15-88 170-243 (370)
206 KOG1523|consensus 98.4 1.5E-06 3.3E-11 49.5 6.2 79 6-87 91-173 (361)
207 PRK01742 tolB translocation pr 98.4 5.9E-06 1.3E-10 49.3 9.1 78 4-87 192-275 (429)
208 KOG4378|consensus 98.4 3.7E-06 8E-11 50.7 7.6 79 7-88 113-193 (673)
209 KOG4227|consensus 98.4 7.1E-06 1.5E-10 48.4 8.4 80 6-88 95-177 (609)
210 KOG2111|consensus 98.4 6E-06 1.3E-10 47.1 7.6 55 34-88 153-210 (346)
211 KOG1188|consensus 98.4 1.8E-06 3.9E-11 49.6 5.5 58 31-88 41-100 (376)
212 KOG4378|consensus 98.4 2.2E-06 4.8E-11 51.6 6.0 76 10-88 203-278 (673)
213 smart00320 WD40 WD40 repeats. 98.3 4.3E-06 9.4E-11 32.1 4.9 39 5-46 2-40 (40)
214 PF02239 Cytochrom_D1: Cytochr 98.3 4.1E-05 8.8E-10 45.1 10.5 81 4-88 25-106 (369)
215 PRK05137 tolB translocation pr 98.3 2.2E-05 4.9E-10 46.9 9.5 76 4-83 190-269 (435)
216 KOG1587|consensus 98.3 3.5E-06 7.6E-11 51.7 6.2 78 8-88 391-470 (555)
217 TIGR03866 PQQ_ABC_repeats PQQ- 98.3 9.1E-06 2E-10 45.5 7.5 57 31-88 2-59 (300)
218 PRK02889 tolB translocation pr 98.3 2.4E-05 5.3E-10 46.7 9.4 80 4-87 184-267 (427)
219 KOG2321|consensus 98.3 9.3E-06 2E-10 49.7 7.1 81 5-88 165-256 (703)
220 KOG1587|consensus 98.2 4E-05 8.8E-10 47.2 9.4 80 6-88 234-321 (555)
221 KOG2106|consensus 98.2 6E-05 1.3E-09 45.7 9.7 67 16-87 408-474 (626)
222 KOG1963|consensus 98.2 2.4E-05 5.2E-10 49.4 8.0 69 14-86 250-318 (792)
223 KOG1963|consensus 98.2 2E-05 4.3E-10 49.7 7.3 72 14-88 204-279 (792)
224 KOG4190|consensus 98.2 2.5E-06 5.5E-11 52.2 3.3 78 6-88 726-810 (1034)
225 KOG1334|consensus 98.2 1.9E-06 4.1E-11 51.5 2.7 77 10-88 386-464 (559)
226 KOG0322|consensus 98.1 4.5E-06 9.7E-11 46.7 3.8 80 4-88 3-83 (323)
227 KOG0771|consensus 98.1 3.6E-05 7.8E-10 45.2 7.4 68 16-86 282-350 (398)
228 KOG1517|consensus 98.1 3.9E-05 8.5E-10 50.1 8.0 83 2-88 1241-1331(1387)
229 KOG2055|consensus 98.1 6.4E-05 1.4E-09 45.0 7.9 71 15-88 213-286 (514)
230 KOG4547|consensus 98.1 5E-05 1.1E-09 46.2 7.5 71 13-88 100-170 (541)
231 PRK04922 tolB translocation pr 98.0 9.2E-05 2E-09 44.3 8.1 80 5-88 193-278 (433)
232 KOG0974|consensus 98.0 9.4E-05 2E-09 47.7 7.6 61 28-88 143-203 (967)
233 KOG1645|consensus 98.0 3.2E-05 7E-10 45.6 5.2 78 8-88 186-264 (463)
234 PRK00178 tolB translocation pr 97.9 0.00047 1E-08 41.2 9.5 80 4-87 187-272 (430)
235 PRK03629 tolB translocation pr 97.9 0.00053 1.2E-08 41.2 9.6 80 5-88 188-273 (429)
236 KOG4497|consensus 97.8 0.00026 5.7E-09 41.2 7.1 68 17-87 50-119 (447)
237 KOG2041|consensus 97.8 6.2E-05 1.3E-09 47.7 4.9 74 8-84 64-139 (1189)
238 KOG4640|consensus 97.8 0.00027 5.9E-09 43.9 7.4 69 16-88 21-90 (665)
239 KOG2139|consensus 97.8 0.00083 1.8E-08 39.6 8.9 64 14-81 237-302 (445)
240 PRK01742 tolB translocation pr 97.8 0.00042 9.2E-09 41.6 7.9 66 18-87 250-319 (429)
241 KOG4547|consensus 97.8 0.00056 1.2E-08 41.9 8.2 68 5-77 134-206 (541)
242 KOG1064|consensus 97.8 3.2E-05 6.9E-10 52.8 3.3 64 12-88 2333-2396(2439)
243 KOG1832|consensus 97.7 0.00026 5.6E-09 46.1 6.3 70 7-79 1093-1162(1516)
244 TIGR02800 propeller_TolB tol-p 97.7 0.0011 2.3E-08 39.4 8.6 78 6-87 180-263 (417)
245 KOG2315|consensus 97.7 0.0013 2.8E-08 40.4 8.7 67 16-87 312-387 (566)
246 COG4946 Uncharacterized protei 97.6 0.0045 9.7E-08 38.0 10.6 70 7-79 393-462 (668)
247 KOG1334|consensus 97.6 0.00012 2.5E-09 44.3 4.1 75 9-86 136-213 (559)
248 PRK04792 tolB translocation pr 97.6 0.0013 2.8E-08 39.9 8.5 71 9-83 211-285 (448)
249 KOG1517|consensus 97.6 0.0013 2.8E-08 43.6 8.6 61 28-88 1219-1285(1387)
250 PRK02889 tolB translocation pr 97.5 0.0015 3.2E-08 39.3 7.9 77 8-88 276-358 (427)
251 KOG2695|consensus 97.5 0.0005 1.1E-08 40.2 5.4 73 14-88 297-374 (425)
252 PRK11028 6-phosphogluconolacto 97.5 0.0025 5.5E-08 36.8 8.0 69 17-88 127-203 (330)
253 PRK11028 6-phosphogluconolacto 97.5 0.0014 2.9E-08 37.9 6.9 64 20-87 232-301 (330)
254 KOG0309|consensus 97.4 0.00088 1.9E-08 42.8 5.8 83 4-88 103-186 (1081)
255 KOG1064|consensus 97.4 0.0009 2E-08 46.4 5.8 78 4-88 2281-2364(2439)
256 KOG2321|consensus 97.3 0.0015 3.2E-08 40.6 6.2 66 20-88 138-203 (703)
257 PF12894 Apc4_WD40: Anaphase-p 97.3 0.0026 5.6E-08 26.6 5.2 31 15-48 11-41 (47)
258 KOG1409|consensus 97.3 0.0055 1.2E-07 36.0 7.5 78 8-88 107-225 (404)
259 KOG2695|consensus 97.3 0.00025 5.3E-09 41.4 2.2 70 16-88 253-327 (425)
260 KOG4532|consensus 97.2 0.0092 2E-07 34.2 8.0 68 18-88 161-231 (344)
261 PRK03629 tolB translocation pr 97.2 0.01 2.2E-07 35.9 8.8 67 9-79 280-349 (429)
262 PRK05137 tolB translocation pr 97.2 0.01 2.3E-07 35.8 8.6 68 8-79 282-352 (435)
263 PF15492 Nbas_N: Neuroblastoma 97.2 0.012 2.7E-07 33.6 8.2 60 28-88 7-71 (282)
264 TIGR02800 propeller_TolB tol-p 97.1 0.018 4E-07 34.3 9.4 74 10-87 272-351 (417)
265 PRK04922 tolB translocation pr 97.1 0.0093 2E-07 36.0 8.2 76 9-88 285-366 (433)
266 KOG2079|consensus 97.1 0.0069 1.5E-07 40.3 7.7 67 14-83 129-198 (1206)
267 KOG3881|consensus 97.1 0.0068 1.5E-07 36.0 6.8 68 18-88 205-275 (412)
268 PF02239 Cytochrom_D1: Cytochr 97.1 0.01 2.2E-07 35.3 7.6 59 30-88 5-64 (369)
269 KOG0309|consensus 97.0 0.0011 2.4E-08 42.5 3.7 83 3-88 146-230 (1081)
270 KOG3914|consensus 97.0 0.0047 1E-07 36.6 6.0 50 36-86 128-177 (390)
271 PRK01029 tolB translocation pr 97.0 0.023 5.1E-07 34.4 9.1 64 9-76 320-386 (428)
272 KOG2315|consensus 97.0 0.024 5.2E-07 35.2 8.9 68 15-88 270-342 (566)
273 KOG0280|consensus 97.0 0.015 3.2E-07 33.7 7.6 68 18-88 124-194 (339)
274 KOG2066|consensus 97.0 0.014 3E-07 37.7 8.1 73 9-82 52-139 (846)
275 KOG1354|consensus 96.9 0.011 2.5E-07 34.9 6.8 70 16-88 26-114 (433)
276 KOG4714|consensus 96.9 0.0028 6.1E-08 36.0 4.2 40 7-48 215-254 (319)
277 KOG2041|consensus 96.8 0.012 2.7E-07 38.0 6.9 69 16-87 15-98 (1189)
278 PLN02919 haloacid dehalogenase 96.8 0.022 4.8E-07 38.3 8.3 66 19-88 807-886 (1057)
279 PF12894 Apc4_WD40: Anaphase-p 96.8 0.0083 1.8E-07 25.1 4.4 27 61-87 12-38 (47)
280 PRK01029 tolB translocation pr 96.7 0.029 6.2E-07 34.1 7.5 71 4-78 173-248 (428)
281 PRK04043 tolB translocation pr 96.6 0.07 1.5E-06 32.4 10.9 73 4-81 177-254 (419)
282 KOG1240|consensus 96.6 0.041 8.8E-07 37.5 8.1 71 15-88 1195-1271(1431)
283 KOG1354|consensus 96.6 0.029 6.3E-07 33.3 6.8 69 16-88 273-357 (433)
284 PRK00178 tolB translocation pr 96.4 0.088 1.9E-06 31.8 8.4 60 15-78 242-304 (430)
285 PF08553 VID27: VID27 cytoplas 96.4 0.026 5.7E-07 36.8 6.4 63 17-84 579-642 (794)
286 PRK04792 tolB translocation pr 96.4 0.088 1.9E-06 32.2 8.3 58 17-78 263-323 (448)
287 KOG1912|consensus 96.3 0.023 4.9E-07 37.0 5.9 83 6-88 46-141 (1062)
288 KOG3617|consensus 96.3 0.0056 1.2E-07 40.1 3.2 67 18-87 62-128 (1416)
289 PF10313 DUF2415: Uncharacteri 96.3 0.023 4.9E-07 23.3 5.2 32 16-49 1-34 (43)
290 KOG0882|consensus 96.2 0.028 6E-07 34.4 5.4 72 13-87 142-228 (558)
291 PF04762 IKI3: IKI3 family; I 96.2 0.14 3E-06 34.3 9.0 68 15-86 75-146 (928)
292 KOG4532|consensus 96.2 0.1 2.3E-06 30.1 8.8 56 15-73 203-263 (344)
293 KOG1275|consensus 96.2 0.094 2E-06 34.9 8.0 53 28-82 185-237 (1118)
294 PF10282 Lactonase: Lactonase, 96.1 0.12 2.7E-06 30.4 9.8 68 17-87 246-319 (345)
295 KOG2314|consensus 96.1 0.06 1.3E-06 33.9 6.6 63 16-81 250-326 (698)
296 PF15492 Nbas_N: Neuroblastoma 96.1 0.043 9.2E-07 31.5 5.5 29 60-88 229-257 (282)
297 KOG3621|consensus 96.0 0.037 8.1E-07 35.4 5.4 67 16-85 77-149 (726)
298 KOG4640|consensus 95.9 0.083 1.8E-06 33.6 6.6 59 8-69 54-114 (665)
299 COG4946 Uncharacterized protei 95.4 0.35 7.6E-06 30.3 10.3 70 13-86 357-427 (668)
300 KOG1275|consensus 95.4 0.12 2.6E-06 34.5 6.2 41 4-49 206-255 (1118)
301 KOG4649|consensus 95.3 0.22 4.7E-06 28.8 6.4 59 30-88 63-121 (354)
302 TIGR02658 TTQ_MADH_Hv methylam 95.3 0.32 6.9E-06 29.1 9.8 67 18-88 250-328 (352)
303 KOG2395|consensus 95.2 0.31 6.7E-06 30.8 7.3 57 28-84 439-495 (644)
304 PLN02919 haloacid dehalogenase 94.9 0.78 1.7E-05 31.5 9.0 67 19-88 743-831 (1057)
305 COG5170 CDC55 Serine/threonine 94.8 0.18 3.9E-06 29.8 5.4 71 15-88 26-115 (460)
306 PF04053 Coatomer_WDAD: Coatom 94.7 0.44 9.4E-06 29.4 7.0 50 30-82 117-166 (443)
307 COG5354 Uncharacterized protei 94.4 0.74 1.6E-05 28.9 7.4 70 13-88 272-346 (561)
308 COG0823 TolB Periplasmic compo 94.2 0.51 1.1E-05 29.0 6.5 79 5-87 182-265 (425)
309 TIGR02658 TTQ_MADH_Hv methylam 94.0 0.75 1.6E-05 27.6 10.1 63 23-88 53-134 (352)
310 PRK04043 tolB translocation pr 94.0 0.82 1.8E-05 28.0 9.4 59 14-76 231-292 (419)
311 KOG4190|consensus 94.0 0.15 3.2E-06 32.5 4.1 77 6-88 775-857 (1034)
312 PF04841 Vps16_N: Vps16, N-ter 93.2 1.2 2.5E-05 27.3 9.1 46 41-88 62-107 (410)
313 KOG2444|consensus 93.2 0.6 1.3E-05 26.4 5.2 58 31-88 115-175 (238)
314 COG2706 3-carboxymuconate cycl 93.2 1.1 2.4E-05 26.8 8.4 67 18-87 147-218 (346)
315 COG5170 CDC55 Serine/threonine 93.1 0.094 2E-06 30.9 2.1 68 18-88 224-307 (460)
316 KOG2079|consensus 92.9 0.19 4.1E-06 34.1 3.4 61 28-88 97-158 (1206)
317 PF14783 BBS2_Mid: Ciliary BBS 92.9 0.63 1.4E-05 23.2 9.8 67 18-88 2-69 (111)
318 TIGR03300 assembly_YfgL outer 92.7 1.1 2.3E-05 26.7 6.2 56 30-87 320-376 (377)
319 PF11768 DUF3312: Protein of u 92.6 0.71 1.5E-05 29.3 5.4 30 59-88 258-287 (545)
320 KOG2314|consensus 92.4 0.66 1.4E-05 29.6 5.1 60 18-81 495-558 (698)
321 PF04762 IKI3: IKI3 family; I 92.2 2 4.4E-05 29.2 7.4 63 20-87 261-330 (928)
322 COG5167 VID27 Protein involved 92.0 1.1 2.3E-05 28.6 5.7 56 28-83 571-626 (776)
323 PF10282 Lactonase: Lactonase, 91.9 1.6 3.5E-05 25.8 8.3 67 18-87 39-114 (345)
324 KOG1912|consensus 91.9 2.7 5.9E-05 28.3 8.0 77 8-84 102-180 (1062)
325 PF14655 RAB3GAP2_N: Rab3 GTPa 91.8 2 4.3E-05 26.5 9.4 52 7-61 299-350 (415)
326 KOG4497|consensus 91.8 1.8 4E-05 26.1 8.7 67 14-84 360-426 (447)
327 KOG0882|consensus 91.7 0.072 1.6E-06 32.7 0.6 71 14-88 8-82 (558)
328 KOG1920|consensus 91.4 3.6 7.9E-05 28.9 9.3 67 16-86 69-135 (1265)
329 PF07676 PD40: WD40-like Beta 91.1 0.5 1.1E-05 18.4 5.0 28 60-87 8-38 (39)
330 PF08596 Lgl_C: Lethal giant l 91.1 2.3 5.1E-05 26.0 9.1 77 7-87 78-170 (395)
331 PF07433 DUF1513: Protein of u 90.8 2.2 4.8E-05 25.3 8.6 67 20-88 9-83 (305)
332 PF15390 DUF4613: Domain of un 90.5 3.4 7.3E-05 26.9 8.1 65 21-88 118-184 (671)
333 KOG1916|consensus 90.5 0.58 1.3E-05 31.7 3.7 73 15-88 180-263 (1283)
334 COG0823 TolB Periplasmic compo 90.2 1.7 3.7E-05 26.8 5.4 63 18-84 240-306 (425)
335 PF12234 Rav1p_C: RAVE protein 89.6 4.2 9.1E-05 26.6 9.9 56 32-87 42-101 (631)
336 PRK02888 nitrous-oxide reducta 89.6 4.3 9.2E-05 26.6 7.3 48 40-88 296-349 (635)
337 PF07569 Hira: TUP1-like enhan 89.0 2.7 5.8E-05 23.5 8.5 59 28-87 20-92 (219)
338 PF06977 SdiA-regulated: SdiA- 88.1 3.4 7.4E-05 23.7 7.6 67 16-86 171-246 (248)
339 COG2706 3-carboxymuconate cycl 88.1 4.1 8.9E-05 24.6 8.5 71 14-87 38-116 (346)
340 PF11715 Nup160: Nucleoporin N 88.1 4 8.7E-05 25.8 6.1 28 29-56 229-256 (547)
341 PF11715 Nup160: Nucleoporin N 88.1 3.8 8.1E-05 26.0 5.9 27 62-88 216-246 (547)
342 KOG3621|consensus 87.1 5.5 0.00012 26.4 6.1 69 16-87 34-103 (726)
343 PF00930 DPPIV_N: Dipeptidyl p 86.9 3.2 7E-05 24.7 5.0 63 15-81 42-121 (353)
344 TIGR03300 assembly_YfgL outer 86.7 4.9 0.00011 24.0 6.2 57 30-88 279-336 (377)
345 PF10168 Nup88: Nuclear pore c 86.6 7.5 0.00016 26.0 8.9 68 17-88 86-177 (717)
346 KOG1645|consensus 85.8 4.1 8.9E-05 25.2 4.9 40 9-51 230-269 (463)
347 PF14783 BBS2_Mid: Ciliary BBS 84.7 3.6 7.8E-05 20.6 8.6 65 15-86 42-110 (111)
348 KOG2114|consensus 84.7 4.4 9.5E-05 27.5 5.0 60 28-88 33-98 (933)
349 PRK02888 nitrous-oxide reducta 83.8 10 0.00022 25.0 7.5 67 18-88 323-402 (635)
350 PF14761 HPS3_N: Hermansky-Pud 82.9 6.5 0.00014 22.2 6.6 48 31-79 29-78 (215)
351 COG5354 Uncharacterized protei 82.4 5.8 0.00013 25.3 4.7 58 16-76 72-147 (561)
352 PF08450 SGL: SMP-30/Gluconola 82.3 6.7 0.00014 21.9 8.3 69 16-87 134-210 (246)
353 PRK13616 lipoprotein LpqB; Pro 81.3 12 0.00027 24.4 7.3 61 18-85 399-471 (591)
354 KOG4649|consensus 81.1 9 0.0002 22.6 7.8 49 28-76 103-152 (354)
355 PF10168 Nup88: Nuclear pore c 81.1 10 0.00022 25.4 5.6 36 15-50 146-181 (717)
356 PF14269 Arylsulfotran_2: Aryl 80.8 9.3 0.0002 22.6 7.7 68 18-88 146-218 (299)
357 PF06977 SdiA-regulated: SdiA- 80.1 9.1 0.0002 22.0 9.8 74 9-86 15-90 (248)
358 PF07433 DUF1513: Protein of u 79.8 11 0.00023 22.6 9.3 59 15-79 216-275 (305)
359 COG3490 Uncharacterized protei 79.5 11 0.00024 22.6 5.9 55 22-79 120-180 (366)
360 COG3204 Uncharacterized protei 78.3 12 0.00026 22.4 7.1 43 12-57 82-124 (316)
361 PRK11138 outer membrane biogen 78.1 13 0.00027 22.6 6.8 56 30-87 335-391 (394)
362 KOG2066|consensus 77.9 19 0.00042 24.5 6.7 61 10-76 155-221 (846)
363 KOG1916|consensus 77.9 7.5 0.00016 27.0 4.4 21 28-48 245-265 (1283)
364 KOG2377|consensus 77.7 16 0.00034 23.5 7.4 35 53-87 59-93 (657)
365 PF14870 PSII_BNR: Photosynthe 77.7 12 0.00027 22.2 10.4 67 15-85 144-210 (302)
366 KOG3617|consensus 77.1 6 0.00013 27.3 3.8 34 12-48 98-131 (1416)
367 TIGR02276 beta_rpt_yvtn 40-res 76.7 3.8 8.3E-05 15.8 5.3 30 29-58 2-32 (42)
368 PF01436 NHL: NHL repeat; Int 75.4 3.6 7.7E-05 14.8 3.5 23 64-86 5-27 (28)
369 PF12657 TFIIIC_delta: Transcr 75.3 11 0.00023 20.2 7.9 26 62-87 87-118 (173)
370 KOG4499|consensus 74.5 15 0.00032 21.5 7.5 44 28-71 221-264 (310)
371 PF13360 PQQ_2: PQQ-like domai 73.2 7.4 0.00016 21.3 3.2 29 29-57 35-63 (238)
372 TIGR02171 Fb_sc_TIGR02171 Fibr 72.9 28 0.00062 24.2 6.0 69 5-76 338-414 (912)
373 KOG1008|consensus 72.3 0.92 2E-05 29.5 -0.5 64 20-88 159-223 (783)
374 KOG2280|consensus 71.7 17 0.00038 24.6 4.8 46 41-88 65-110 (829)
375 PF02897 Peptidase_S9_N: Proly 71.0 21 0.00045 21.7 7.0 54 20-78 128-187 (414)
376 KOG1008|consensus 70.2 4.4 9.5E-05 26.7 2.0 69 17-88 197-273 (783)
377 PF00780 CNH: CNH domain; Int 68.3 20 0.00043 20.4 7.1 57 28-87 5-61 (275)
378 KOG3630|consensus 67.9 6.4 0.00014 27.9 2.5 65 19-86 159-224 (1405)
379 KOG1920|consensus 67.7 34 0.00074 24.7 5.6 33 17-52 291-326 (1265)
380 PF08553 VID27: VID27 cytoplas 65.7 41 0.0009 23.1 9.4 82 4-88 513-604 (794)
381 PF04841 Vps16_N: Vps16, N-ter 63.6 33 0.00072 21.3 10.2 38 16-56 217-254 (410)
382 PF12768 Rax2: Cortical protei 63.3 29 0.00062 20.5 5.2 39 40-78 16-54 (281)
383 PF06433 Me-amine-dh_H: Methyl 62.1 34 0.00074 20.9 4.7 46 42-88 271-318 (342)
384 KOG2395|consensus 61.9 41 0.0009 22.1 4.9 52 36-88 400-457 (644)
385 PRK13616 lipoprotein LpqB; Pro 61.1 45 0.00098 22.0 6.2 58 17-79 351-415 (591)
386 TIGR03606 non_repeat_PQQ dehyd 60.9 41 0.00089 21.4 7.3 51 30-81 369-426 (454)
387 PF14655 RAB3GAP2_N: Rab3 GTPa 59.9 41 0.00089 21.2 5.1 33 56-88 303-335 (415)
388 smart00564 PQQ beta-propeller 58.6 10 0.00022 13.7 3.9 22 32-53 8-29 (33)
389 COG3386 Gluconolactonase [Carb 56.3 41 0.0009 20.1 4.9 35 44-78 145-180 (307)
390 PF12341 DUF3639: Protein of u 55.2 12 0.00027 13.7 3.4 24 17-45 3-26 (27)
391 KOG1832|consensus 55.1 23 0.0005 25.0 3.3 36 53-88 1094-1129(1516)
392 PF12234 Rav1p_C: RAVE protein 51.5 72 0.0016 21.4 8.5 70 15-87 72-153 (631)
393 PF10584 Proteasome_A_N: Prote 50.6 4.5 9.7E-05 14.2 -0.2 7 68-74 8-14 (23)
394 PF08728 CRT10: CRT10; InterP 48.1 88 0.0019 21.4 7.5 59 28-87 112-192 (717)
395 TIGR02171 Fb_sc_TIGR02171 Fibr 46.8 91 0.002 22.0 4.9 38 41-79 330-369 (912)
396 PF07995 GSDH: Glucose / Sorbo 46.6 63 0.0014 19.4 6.4 79 6-85 244-330 (331)
397 KOG3616|consensus 46.2 1E+02 0.0022 21.7 5.5 33 15-50 14-46 (1636)
398 COG3391 Uncharacterized conser 43.9 76 0.0016 19.5 8.8 65 19-87 119-187 (381)
399 KOG3630|consensus 43.6 1.3E+02 0.0029 22.2 6.2 59 15-76 198-259 (1405)
400 PF13570 PQQ_3: PQQ-like domai 42.9 24 0.00053 13.5 3.1 19 30-48 21-39 (40)
401 PF14583 Pectate_lyase22: Olig 42.6 85 0.0018 19.7 4.7 52 22-76 42-96 (386)
402 PF08450 SGL: SMP-30/Gluconola 40.8 67 0.0014 18.0 10.3 57 18-78 186-244 (246)
403 TIGR03075 PQQ_enz_alc_DH PQQ-d 40.6 1E+02 0.0022 20.0 6.3 48 29-76 471-519 (527)
404 PF01011 PQQ: PQQ enzyme repea 40.2 27 0.00059 13.3 4.1 25 33-57 3-27 (38)
405 PF10214 Rrn6: RNA polymerase 39.5 1.2E+02 0.0027 20.7 8.3 30 16-47 146-175 (765)
406 PF08801 Nucleoporin_N: Nup133 38.7 96 0.0021 19.2 4.1 30 17-49 191-220 (422)
407 KOG2114|consensus 38.2 1.4E+02 0.0031 21.1 8.5 61 15-79 171-233 (933)
408 KOG4441|consensus 37.5 1.2E+02 0.0026 20.0 4.6 55 29-83 332-392 (571)
409 KOG2280|consensus 37.3 1.4E+02 0.0031 20.8 5.2 57 16-77 84-144 (829)
410 KOG2247|consensus 37.2 56 0.0012 21.4 2.8 54 21-77 123-176 (615)
411 PHA02713 hypothetical protein; 35.4 1.3E+02 0.0028 19.7 4.8 52 29-82 463-523 (557)
412 PRK14751 tetracycline resistan 32.8 30 0.00066 12.4 0.8 9 80-88 13-21 (28)
413 PF00930 DPPIV_N: Dipeptidyl p 32.1 1.2E+02 0.0026 18.3 8.1 70 6-78 270-345 (353)
414 KOG3616|consensus 31.8 92 0.002 21.9 3.3 25 64-88 18-42 (1636)
415 KOG3179|consensus 31.4 42 0.00091 19.2 1.6 44 9-60 149-192 (245)
416 PF14782 BBS2_C: Ciliary BBSom 31.0 1.5E+02 0.0032 19.0 4.3 26 62-87 16-42 (431)
417 KOG2377|consensus 30.2 1.7E+02 0.0036 19.4 8.5 56 13-71 64-123 (657)
418 KOG4460|consensus 29.9 1.8E+02 0.0038 19.6 8.2 68 18-88 106-196 (741)
419 PF01731 Arylesterase: Arylest 28.4 79 0.0017 15.1 4.4 27 61-87 54-81 (86)
420 KOG1983|consensus 27.6 1.2E+02 0.0025 21.8 3.3 24 28-51 244-267 (993)
421 PF09081 DUF1921: Domain of un 27.5 40 0.00087 14.2 0.9 8 80-87 43-50 (51)
422 KOG1897|consensus 26.8 2.5E+02 0.0055 20.4 6.0 53 28-82 838-890 (1096)
423 PRK10115 protease 2; Provision 25.5 2.3E+02 0.0049 19.3 7.1 53 18-76 129-187 (686)
424 PF03088 Str_synth: Strictosid 24.7 97 0.0021 14.9 5.2 38 39-77 36-73 (89)
425 KOG2467|consensus 24.5 89 0.0019 19.8 2.2 22 28-49 339-360 (477)
426 PF10395 Utp8: Utp8 family; I 23.9 2.5E+02 0.0054 19.3 4.8 30 15-47 129-158 (670)
427 KOG1983|consensus 23.7 2.2E+02 0.0048 20.5 4.1 20 69-88 243-262 (993)
428 PRK10526 acyl-CoA thioesterase 22.4 1.8E+02 0.0039 17.2 4.1 28 61-88 259-286 (286)
429 PHA03092 semaphorin-like prote 21.9 1.1E+02 0.0025 15.5 2.0 22 28-49 70-91 (134)
430 cd00216 PQQ_DH Dehydrogenases 20.4 2.5E+02 0.0054 18.0 6.1 30 29-58 405-434 (488)
No 1
>KOG0271|consensus
Probab=99.80 E-value=3.6e-19 Score=100.88 Aligned_cols=78 Identities=29% Similarity=0.329 Sum_probs=74.4
Q ss_pred eEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEc
Q psy6444 8 PLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKAL 87 (88)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 87 (88)
-..+.||.++|.+++|+ |+|..+++|+-|.++++||+.+....+.+++|+..|.+++|+||+..+++++.|++|++|
T Consensus 108 ssS~~GH~e~Vl~~~fs---p~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lw 184 (480)
T KOG0271|consen 108 SSSIAGHGEAVLSVQFS---PTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLW 184 (480)
T ss_pred ccccCCCCCcEEEEEec---CCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEe
Confidence 44678899999999999 799999999999999999999999999999999999999999999999999999999999
Q ss_pred C
Q psy6444 88 K 88 (88)
Q Consensus 88 ~ 88 (88)
|
T Consensus 185 d 185 (480)
T KOG0271|consen 185 D 185 (480)
T ss_pred c
Confidence 7
No 2
>KOG0263|consensus
Probab=99.80 E-value=6.2e-19 Score=105.81 Aligned_cols=83 Identities=29% Similarity=0.463 Sum_probs=79.8
Q ss_pred CccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCC
Q psy6444 3 SIRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADF 82 (88)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~ 82 (88)
.++..++.+.||+++|.+++|+ ++|.++++++.|+.|.+||+.++..+..+.+|.+.|.++.|+.+|..+++++.|+
T Consensus 565 ~~G~~VRiF~GH~~~V~al~~S---p~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~Dn 641 (707)
T KOG0263|consen 565 STGNSVRIFTGHKGPVTALAFS---PCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADN 641 (707)
T ss_pred CCCcEEEEecCCCCceEEEEEc---CCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCC
Confidence 4678899999999999999999 7999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEcC
Q psy6444 83 QAKALK 88 (88)
Q Consensus 83 ~i~~~~ 88 (88)
++++||
T Consensus 642 sV~lWD 647 (707)
T KOG0263|consen 642 SVRLWD 647 (707)
T ss_pred eEEEEE
Confidence 999997
No 3
>KOG0271|consensus
Probab=99.77 E-value=2e-18 Score=97.92 Aligned_cols=83 Identities=27% Similarity=0.352 Sum_probs=75.1
Q ss_pred CccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEE-EEecCCCCeEEEEEECC-----CCCeEE
Q psy6444 3 SIRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWI-GTFEGHKGCVWGVDINK-----DASKAA 76 (88)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~-----~~~~~~ 76 (88)
.+..+.+++++|...|.|++|+ |+|.++++++.++.|++|+..++..+ ..+.+|...|.+++|.| ..++++
T Consensus 145 ~TeTp~~t~KgH~~WVlcvaws---PDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~la 221 (480)
T KOG0271|consen 145 DTETPLFTCKGHKNWVLCVAWS---PDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLA 221 (480)
T ss_pred CCCCcceeecCCccEEEEEEEC---CCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCcccee
Confidence 4667899999999999999999 89999999999999999998887754 67899999999999987 356899
Q ss_pred EecCCCeEEEcC
Q psy6444 77 SGAADFQAKALK 88 (88)
Q Consensus 77 ~~~~d~~i~~~~ 88 (88)
++++|+.+++||
T Consensus 222 s~skDg~vrIWd 233 (480)
T KOG0271|consen 222 SSSKDGSVRIWD 233 (480)
T ss_pred cccCCCCEEEEE
Confidence 999999999997
No 4
>KOG0266|consensus
Probab=99.76 E-value=2.9e-17 Score=96.93 Aligned_cols=82 Identities=24% Similarity=0.343 Sum_probs=78.2
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
++..++++++|...|.+++|+ +.++.+++++.|+.+++|++.++.....+.+|...|..++|++++.++++++.|+.
T Consensus 235 ~~~~~~~l~gH~~~v~~~~f~---p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~ 311 (456)
T KOG0266|consen 235 DGRNLKTLKGHSTYVTSVAFS---PDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGT 311 (456)
T ss_pred CCeEEEEecCCCCceEEEEec---CCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCcc
Confidence 457889999999999999999 78899999999999999999999999999999999999999999999999999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
+++||
T Consensus 312 i~vwd 316 (456)
T KOG0266|consen 312 IRVWD 316 (456)
T ss_pred EEEEE
Confidence 99997
No 5
>KOG0263|consensus
Probab=99.76 E-value=3.8e-18 Score=102.50 Aligned_cols=81 Identities=23% Similarity=0.270 Sum_probs=78.1
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeE
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQA 84 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 84 (88)
.++++.+.+|.+.|.|+.|+ |+..++++|+.|.++++||+.++..++.|.||.+.|.+++|+|+|+++++++.|+.|
T Consensus 525 ~~PlRifaghlsDV~cv~FH---PNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I 601 (707)
T KOG0263|consen 525 NKPLRIFAGHLSDVDCVSFH---PNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLI 601 (707)
T ss_pred CCchhhhcccccccceEEEC---CcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcE
Confidence 46888999999999999999 799999999999999999999999999999999999999999999999999999999
Q ss_pred EEcC
Q psy6444 85 KALK 88 (88)
Q Consensus 85 ~~~~ 88 (88)
.+||
T Consensus 602 ~iWD 605 (707)
T KOG0263|consen 602 KIWD 605 (707)
T ss_pred EEEE
Confidence 9997
No 6
>KOG0286|consensus
Probab=99.74 E-value=4.1e-17 Score=89.98 Aligned_cols=84 Identities=25% Similarity=0.328 Sum_probs=79.7
Q ss_pred CccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCC
Q psy6444 3 SIRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADF 82 (88)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~ 82 (88)
..++.+..+.+|++.|.+++++| .+++.+++++.|+.-++||++.+...+.|.+|..-|..++|.|+|.-+++++.|+
T Consensus 174 e~g~~~~~f~GH~gDV~slsl~p--~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~ 251 (343)
T KOG0286|consen 174 ETGQQTQVFHGHTGDVMSLSLSP--SDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDA 251 (343)
T ss_pred ccceEEEEecCCcccEEEEecCC--CCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCc
Confidence 46788999999999999999995 5999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEcC
Q psy6444 83 QAKALK 88 (88)
Q Consensus 83 ~i~~~~ 88 (88)
++|+||
T Consensus 252 tcRlyD 257 (343)
T KOG0286|consen 252 TCRLYD 257 (343)
T ss_pred eeEEEe
Confidence 999987
No 7
>KOG0272|consensus
Probab=99.74 E-value=7.7e-18 Score=96.13 Aligned_cols=81 Identities=22% Similarity=0.281 Sum_probs=75.8
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeE
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQA 84 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 84 (88)
+..+...+||...|.+++|. ++|..+++|+.|..-++||+++++.+..+.+|.+.|..++|+|+|.++++++.|+++
T Consensus 293 k~ElL~QEGHs~~v~~iaf~---~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~ 369 (459)
T KOG0272|consen 293 KSELLLQEGHSKGVFSIAFQ---PDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTC 369 (459)
T ss_pred chhhHhhcccccccceeEec---CCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcE
Confidence 34445568899999999999 799999999999999999999999999999999999999999999999999999999
Q ss_pred EEcC
Q psy6444 85 KALK 88 (88)
Q Consensus 85 ~~~~ 88 (88)
+|||
T Consensus 370 kVWD 373 (459)
T KOG0272|consen 370 KVWD 373 (459)
T ss_pred EEee
Confidence 9997
No 8
>KOG0279|consensus
Probab=99.73 E-value=7.1e-17 Score=88.46 Aligned_cols=82 Identities=28% Similarity=0.314 Sum_probs=78.2
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
-|.+++.++||.-.|..+..+ ++|++.++++.|+.+++||+..+...+.+.+|..-+.+++++++.+++++++.|.+
T Consensus 52 ~G~~~r~~~GHsH~v~dv~~s---~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkT 128 (315)
T KOG0279|consen 52 YGVPVRRLTGHSHFVSDVVLS---SDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKT 128 (315)
T ss_pred cCceeeeeeccceEecceEEc---cCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcce
Confidence 467899999999999999999 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
|++||
T Consensus 129 iklwn 133 (315)
T KOG0279|consen 129 IKLWN 133 (315)
T ss_pred eeeee
Confidence 99996
No 9
>PTZ00421 coronin; Provisional
Probab=99.71 E-value=4.3e-16 Score=92.64 Aligned_cols=81 Identities=19% Similarity=0.177 Sum_probs=73.8
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEE
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK 85 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 85 (88)
.++..+.+|...|.+++|+| ...+.+++++.|+.+++||+.++..+..+.+|...|.+++|++++.++++++.|+.++
T Consensus 116 ~~l~~L~gH~~~V~~l~f~P--~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~Ir 193 (493)
T PTZ00421 116 DPIVHLQGHTKKVGIVSFHP--SAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLN 193 (493)
T ss_pred cceEEecCCCCcEEEEEeCc--CCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEE
Confidence 45778899999999999994 3457999999999999999998888888999999999999999999999999999999
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
+||
T Consensus 194 IwD 196 (493)
T PTZ00421 194 IID 196 (493)
T ss_pred EEE
Confidence 997
No 10
>KOG0295|consensus
Probab=99.70 E-value=2.7e-16 Score=88.71 Aligned_cols=84 Identities=25% Similarity=0.263 Sum_probs=74.0
Q ss_pred cceeEEecCCCCCEEEEEEEec------------CCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCC
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDI------------TESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDA 72 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 72 (88)
+.....+++|..+|.+++|.|- ...++.+++++.|+.|++|++.++.++..+.+|.+.|..++|+|.|
T Consensus 267 ~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~G 346 (406)
T KOG0295|consen 267 KQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGG 346 (406)
T ss_pred chhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCC
Confidence 3445567889999999999753 1123689999999999999999999999999999999999999999
Q ss_pred CeEEEecCCCeEEEcC
Q psy6444 73 SKAASGAADFQAKALK 88 (88)
Q Consensus 73 ~~~~~~~~d~~i~~~~ 88 (88)
++++++..|+++++||
T Consensus 347 kyi~ScaDDktlrvwd 362 (406)
T KOG0295|consen 347 KYILSCADDKTLRVWD 362 (406)
T ss_pred eEEEEEecCCcEEEEE
Confidence 9999999999999997
No 11
>KOG0318|consensus
Probab=99.69 E-value=1e-15 Score=89.74 Aligned_cols=79 Identities=25% Similarity=0.406 Sum_probs=73.1
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEec---CCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFE---GHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
-..+++.|...|.+++|+ |+|+.+++++.|+.+.+||-.+++.+..+. +|++.|.+++|+||+.++++++.|.+
T Consensus 182 Fk~s~r~HskFV~~VRys---PDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt 258 (603)
T KOG0318|consen 182 FKSSFREHSKFVNCVRYS---PDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKT 258 (603)
T ss_pred eeecccccccceeeEEEC---CCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCce
Confidence 345667788999999999 799999999999999999999999888887 89999999999999999999999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
+++||
T Consensus 259 ~KIWd 263 (603)
T KOG0318|consen 259 IKIWD 263 (603)
T ss_pred EEEEE
Confidence 99997
No 12
>KOG0272|consensus
Probab=99.67 E-value=5.3e-16 Score=88.79 Aligned_cols=82 Identities=18% Similarity=0.212 Sum_probs=76.9
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECC-CCCeEEEecCCC
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINK-DASKAASGAADF 82 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~ 82 (88)
++..+..|.+|..+|..+.|+ |+|..+++++.|+.+++||++....+..+.+|.+.|..++|+| .|.++++++.|+
T Consensus 334 tgr~im~L~gH~k~I~~V~fs---PNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~ 410 (459)
T KOG0272|consen 334 TGRCIMFLAGHIKEILSVAFS---PNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDN 410 (459)
T ss_pred cCcEEEEecccccceeeEeEC---CCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCc
Confidence 567888999999999999999 7999999999999999999998888999999999999999998 688889999999
Q ss_pred eEEEcC
Q psy6444 83 QAKALK 88 (88)
Q Consensus 83 ~i~~~~ 88 (88)
++++|.
T Consensus 411 t~kiWs 416 (459)
T KOG0272|consen 411 TVKIWS 416 (459)
T ss_pred ceeeec
Confidence 999994
No 13
>KOG0266|consensus
Probab=99.66 E-value=1.6e-15 Score=89.66 Aligned_cols=79 Identities=30% Similarity=0.402 Sum_probs=72.9
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEEC-CCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEE
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQG-DTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK 85 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 85 (88)
..+.+.+|...|..++|+ +++..+++++.|+.+++|++ ..+..+..+.+|...|.+++|+|+++.+++++.|++|+
T Consensus 195 ~~~~l~~h~~~v~~~~fs---~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvr 271 (456)
T KOG0266|consen 195 LLRELSGHTRGVSDVAFS---PDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVR 271 (456)
T ss_pred hhccccccccceeeeEEC---CCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEE
Confidence 455668899999999999 79999999999999999999 55578899999999999999999999999999999999
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
+||
T Consensus 272 iWd 274 (456)
T KOG0266|consen 272 IWD 274 (456)
T ss_pred EEe
Confidence 997
No 14
>KOG0316|consensus
Probab=99.65 E-value=2e-15 Score=81.60 Aligned_cols=83 Identities=27% Similarity=0.243 Sum_probs=78.3
Q ss_pred CccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCC
Q psy6444 3 SIRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADF 82 (88)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~ 82 (88)
..+..++++.+|...|..++.+ .+...+++++-|+.+.+||+.+++.++.+.+|.+.|+.++|+.+...+++++.|.
T Consensus 47 ~rg~liktYsghG~EVlD~~~s---~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~ 123 (307)
T KOG0316|consen 47 LRGALIKTYSGHGHEVLDAALS---SDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDS 123 (307)
T ss_pred cccceeeeecCCCceeeecccc---ccccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccc
Confidence 3567889999999999999988 7888999999999999999999999999999999999999999999999999999
Q ss_pred eEEEcC
Q psy6444 83 QAKALK 88 (88)
Q Consensus 83 ~i~~~~ 88 (88)
++++||
T Consensus 124 s~r~wD 129 (307)
T KOG0316|consen 124 SVRLWD 129 (307)
T ss_pred eeEEEE
Confidence 999997
No 15
>KOG0643|consensus
Probab=99.63 E-value=5.3e-15 Score=81.07 Aligned_cols=76 Identities=34% Similarity=0.665 Sum_probs=73.0
Q ss_pred EecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 10 TCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 10 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
.++||..++..+.|+ .+|++|+++.+|....+|-..+++++..+.+|.+.|++++.+-+...+++++.|.++++||
T Consensus 5 ~l~GHERplTqiKyN---~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWD 80 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYN---REGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWD 80 (327)
T ss_pred ccccCccccceEEec---CCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEE
Confidence 478999999999999 8999999999999999999889999999999999999999999999999999999999997
No 16
>KOG0319|consensus
Probab=99.63 E-value=5.7e-15 Score=89.12 Aligned_cols=82 Identities=26% Similarity=0.262 Sum_probs=77.4
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
+...+-+|.||+..|.++.|+ +..+.+++++.|+++++|.+.+..++..+.||...|....|-.++.++++++.||.
T Consensus 494 ~~~l~~vLsGH~RGvw~V~Fs---~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGl 570 (775)
T KOG0319|consen 494 QLRLLGVLSGHTRGVWCVSFS---KNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGL 570 (775)
T ss_pred CceEEEEeeCCccceEEEEec---cccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCc
Confidence 445778999999999999999 78899999999999999999999999999999999999999999999999999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
+++||
T Consensus 571 iKlWn 575 (775)
T KOG0319|consen 571 IKLWN 575 (775)
T ss_pred EEEEe
Confidence 99996
No 17
>PTZ00421 coronin; Provisional
Probab=99.62 E-value=2e-14 Score=85.64 Aligned_cols=77 Identities=26% Similarity=0.243 Sum_probs=67.6
Q ss_pred EecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCC-------CEEEEecCCCCeEEEEEECCCC-CeEEEecCC
Q psy6444 10 TCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTG-------DWIGTFEGHKGCVWGVDINKDA-SKAASGAAD 81 (88)
Q Consensus 10 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d 81 (88)
.+.+|++.|.+++|+| .+++.+++++.|+.|++|++..+ ..+..+.+|...|..++|+|++ .++++++.|
T Consensus 70 ~l~GH~~~V~~v~fsP--~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~D 147 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNP--FDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGAD 147 (493)
T ss_pred eEeCCCCCEEEEEEcC--CCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCC
Confidence 4678999999999994 48899999999999999998754 2456788999999999999975 688899999
Q ss_pred CeEEEcC
Q psy6444 82 FQAKALK 88 (88)
Q Consensus 82 ~~i~~~~ 88 (88)
+++++||
T Consensus 148 gtVrIWD 154 (493)
T PTZ00421 148 MVVNVWD 154 (493)
T ss_pred CEEEEEE
Confidence 9999997
No 18
>KOG0303|consensus
Probab=99.62 E-value=4.8e-15 Score=84.67 Aligned_cols=82 Identities=21% Similarity=0.308 Sum_probs=76.0
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
...++..|.+|+..|.-+.|+| ...+.|++++.|..+.+|++.++..+-.+. |...|.++.|+.+|.++.+.+.|..
T Consensus 120 ltepvv~L~gH~rrVg~V~wHP--tA~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKk 196 (472)
T KOG0303|consen 120 LTEPVVELYGHQRRVGLVQWHP--TAPNVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKK 196 (472)
T ss_pred cccceEEEeecceeEEEEeecc--cchhhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccce
Confidence 3467899999999999999998 777999999999999999999999777777 9999999999999999999999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
+|+||
T Consensus 197 vRv~d 201 (472)
T KOG0303|consen 197 VRVID 201 (472)
T ss_pred eEEEc
Confidence 99997
No 19
>KOG0291|consensus
Probab=99.61 E-value=1.2e-14 Score=88.27 Aligned_cols=79 Identities=24% Similarity=0.325 Sum_probs=75.0
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEE
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
.+...++|-..+.+++++ ++|+.+++|..|+.|++|+..++.+...+..|...+..+.|+..++.+++++-||++|.
T Consensus 342 YVlKQQgH~~~i~~l~YS---pDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRA 418 (893)
T KOG0291|consen 342 YVLKQQGHSDRITSLAYS---PDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRA 418 (893)
T ss_pred eeeeccccccceeeEEEC---CCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEe
Confidence 455678899999999999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred cC
Q psy6444 87 LK 88 (88)
Q Consensus 87 ~~ 88 (88)
||
T Consensus 419 wD 420 (893)
T KOG0291|consen 419 WD 420 (893)
T ss_pred ee
Confidence 97
No 20
>PTZ00420 coronin; Provisional
Probab=99.61 E-value=4.8e-14 Score=84.98 Aligned_cols=81 Identities=20% Similarity=0.120 Sum_probs=68.4
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC--------EEEEecCCCCeEEEEEECCCCCeE-E
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD--------WIGTFEGHKGCVWGVDINKDASKA-A 76 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~i~~~~~~~~~~~~-~ 76 (88)
.++..+.+|.+.|.+++|+| .++..+++++.|+.+++|++..+. .+..+.+|...|..++|+|++..+ +
T Consensus 65 ~~v~~L~gH~~~V~~lafsP--~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLa 142 (568)
T PTZ00420 65 PPVIKLKGHTSSILDLQFNP--CFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMC 142 (568)
T ss_pred ceEEEEcCCCCCEEEEEEcC--CCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEE
Confidence 45677899999999999995 457899999999999999987532 234577899999999999988765 6
Q ss_pred EecCCCeEEEcC
Q psy6444 77 SGAADFQAKALK 88 (88)
Q Consensus 77 ~~~~d~~i~~~~ 88 (88)
+++.|+++++||
T Consensus 143 SgS~DgtIrIWD 154 (568)
T PTZ00420 143 SSGFDSFVNIWD 154 (568)
T ss_pred EEeCCCeEEEEE
Confidence 889999999997
No 21
>KOG0284|consensus
Probab=99.60 E-value=3.3e-15 Score=85.43 Aligned_cols=80 Identities=23% Similarity=0.314 Sum_probs=74.5
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEE
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK 85 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 85 (88)
+..+.+.+|.-.|.+++|+ +....++++++|..|++||.+++.++..+.+|+..|..+.|++++.+++++++|..++
T Consensus 213 kee~vL~GHgwdVksvdWH---P~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~k 289 (464)
T KOG0284|consen 213 KEERVLRGHGWDVKSVDWH---PTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCK 289 (464)
T ss_pred chhheeccCCCCcceeccC---CccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEE
Confidence 4455678998889999999 6888999999999999999999999999999999999999999999999999999999
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
++|
T Consensus 290 v~D 292 (464)
T KOG0284|consen 290 VFD 292 (464)
T ss_pred EEe
Confidence 987
No 22
>KOG0283|consensus
Probab=99.60 E-value=3.8e-15 Score=90.27 Aligned_cols=79 Identities=24% Similarity=0.300 Sum_probs=72.6
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECC-CCCeEEEecCCCe
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINK-DASKAASGAADFQ 83 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~ 83 (88)
.+|+..+.||++.|.++.|+ ..++|++++-|+++++|.+....++..|. |..-|++++|+| |.+++++|+-|+.
T Consensus 359 ekP~~ef~GHt~DILDlSWS----Kn~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~K 433 (712)
T KOG0283|consen 359 EKPFCEFKGHTADILDLSWS----KNNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGK 433 (712)
T ss_pred ccchhhhhccchhheecccc----cCCeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeecccccc
Confidence 46788899999999999998 57799999999999999998888888887 999999999999 6789999999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
+|+|+
T Consensus 434 vRiWs 438 (712)
T KOG0283|consen 434 VRLWS 438 (712)
T ss_pred eEEee
Confidence 99995
No 23
>KOG1445|consensus
Probab=99.60 E-value=1.7e-15 Score=91.04 Aligned_cols=81 Identities=16% Similarity=0.167 Sum_probs=75.4
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEE
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK 85 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 85 (88)
.+...++.|...|..++|+| ...+.+++++.|-.|++||+.+......+.+|.+.|..++|+|+|+++++.|+|++++
T Consensus 668 tPe~~lt~h~eKI~slRfHP--LAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~r 745 (1012)
T KOG1445|consen 668 TPEKILTIHGEKITSLRFHP--LAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLR 745 (1012)
T ss_pred CcceeeecccceEEEEEecc--hhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEE
Confidence 45667889999999999998 7889999999999999999999888889999999999999999999999999999999
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
+|+
T Consensus 746 Vy~ 748 (1012)
T KOG1445|consen 746 VYE 748 (1012)
T ss_pred EeC
Confidence 984
No 24
>KOG0277|consensus
Probab=99.59 E-value=9.5e-15 Score=79.63 Aligned_cols=83 Identities=17% Similarity=0.266 Sum_probs=75.2
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCC-CCeEEEecCCC
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKD-ASKAASGAADF 82 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~ 82 (88)
+.+|+..++.|...|.++.|++ ..++.+++++.|++|++|+......+..+.+|...|....|+|. +.++++++.|+
T Consensus 93 ~s~Pi~~~kEH~~EV~Svdwn~--~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~ 170 (311)
T KOG0277|consen 93 PSKPIHKFKEHKREVYSVDWNT--VRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDG 170 (311)
T ss_pred CCcchhHHHhhhhheEEecccc--ccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCc
Confidence 4468889999999999999996 67788888899999999999888889999999999999999995 67889999999
Q ss_pred eEEEcC
Q psy6444 83 QAKALK 88 (88)
Q Consensus 83 ~i~~~~ 88 (88)
.+++||
T Consensus 171 ~l~lwd 176 (311)
T KOG0277|consen 171 TLRLWD 176 (311)
T ss_pred eEEEEE
Confidence 999997
No 25
>KOG1034|consensus
Probab=99.59 E-value=1.1e-14 Score=81.66 Aligned_cols=83 Identities=27% Similarity=0.341 Sum_probs=73.8
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEe---cCCCCeEEEEEECCCCCeEEEecC
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTF---EGHKGCVWGVDINKDASKAASGAA 80 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~ 80 (88)
.++....+.+|...|..+.+.| ...++++++++|..+++|++++..++..+ .+|...|.+++|+.++.++++++.
T Consensus 124 ~~~~~~~~~ghG~sINeik~~p--~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGm 201 (385)
T KOG1034|consen 124 SGQCSKNYRGHGGSINEIKFHP--DRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGM 201 (385)
T ss_pred hhhhccceeccCccchhhhcCC--CCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCC
Confidence 3455677889999999999997 77799999999999999999988876554 679999999999999999999999
Q ss_pred CCeEEEcC
Q psy6444 81 DFQAKALK 88 (88)
Q Consensus 81 d~~i~~~~ 88 (88)
|.++.+|+
T Consensus 202 Dhslk~W~ 209 (385)
T KOG1034|consen 202 DHSLKLWR 209 (385)
T ss_pred cceEEEEe
Confidence 99999995
No 26
>KOG0282|consensus
Probab=99.59 E-value=8.5e-16 Score=89.04 Aligned_cols=83 Identities=24% Similarity=0.272 Sum_probs=77.1
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCC-CCEEEEecCCCCeEEEEEECCCCCeEEEecCCC
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDT-GDWIGTFEGHKGCVWGVDINKDASKAASGAADF 82 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~ 82 (88)
+.+.+.++.+|+..|.++.|.| ..+.++++++.|+.|++|++.. +.+++.+.+|...|..++|+.++..+++++.|+
T Consensus 203 Pkk~~~~~~gH~kgvsai~~fp--~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~ 280 (503)
T KOG0282|consen 203 PKKLSHNLSGHTKGVSAIQWFP--KKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDR 280 (503)
T ss_pred cHhheeeccCCccccchhhhcc--ceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecce
Confidence 4567889999999999999996 5889999999999999999876 778999999999999999999999999999999
Q ss_pred eEEEcC
Q psy6444 83 QAKALK 88 (88)
Q Consensus 83 ~i~~~~ 88 (88)
.+++||
T Consensus 281 ~lKlwD 286 (503)
T KOG0282|consen 281 FLKLWD 286 (503)
T ss_pred eeeeec
Confidence 999998
No 27
>KOG0264|consensus
Probab=99.59 E-value=2.1e-14 Score=82.54 Aligned_cols=82 Identities=21% Similarity=0.236 Sum_probs=72.1
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCC-CEEEEecCCCCeEEEEEECCCCC-eEEEecCCC
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTG-DWIGTFEGHKGCVWGVDINKDAS-KAASGAADF 82 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~ 82 (88)
.++.....+|.+.+.|++|+| .++..|++++.|+++.+||+++- ..+..+.+|...|..+.|+|+.. .+++++.|+
T Consensus 262 ~~~~~~~~ah~~~vn~~~fnp--~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~ 339 (422)
T KOG0264|consen 262 SKPSHSVKAHSAEVNCVAFNP--FNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDR 339 (422)
T ss_pred CCCcccccccCCceeEEEeCC--CCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCC
Confidence 445666788999999999998 88899999999999999999864 47789999999999999999766 556888999
Q ss_pred eEEEcC
Q psy6444 83 QAKALK 88 (88)
Q Consensus 83 ~i~~~~ 88 (88)
++.+||
T Consensus 340 rl~vWD 345 (422)
T KOG0264|consen 340 RLNVWD 345 (422)
T ss_pred cEEEEe
Confidence 999997
No 28
>KOG0279|consensus
Probab=99.58 E-value=5.9e-14 Score=77.24 Aligned_cols=82 Identities=21% Similarity=0.182 Sum_probs=70.2
Q ss_pred CccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCC--CCeEEEEEECCC--CCeEEEe
Q psy6444 3 SIRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGH--KGCVWGVDINKD--ASKAASG 78 (88)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~--~~~~~~~ 78 (88)
..+++.+.|.+|+.-|.+++|+ ++...+++++.|.++++|+.. +.+...+... .+.|.+++|+|. ...++++
T Consensus 93 ~~g~~t~~f~GH~~dVlsva~s---~dn~qivSGSrDkTiklwnt~-g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~ 168 (315)
T KOG0279|consen 93 ATGESTRRFVGHTKDVLSVAFS---TDNRQIVSGSRDKTIKLWNTL-GVCKYTIHEDSHREWVSCVRFSPNESNPIIVSA 168 (315)
T ss_pred cCCcEEEEEEecCCceEEEEec---CCCceeecCCCcceeeeeeec-ccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEc
Confidence 3567889999999999999999 799999999999999999986 4444444332 789999999998 5688899
Q ss_pred cCCCeEEEcC
Q psy6444 79 AADFQAKALK 88 (88)
Q Consensus 79 ~~d~~i~~~~ 88 (88)
+.|+++++||
T Consensus 169 s~DktvKvWn 178 (315)
T KOG0279|consen 169 SWDKTVKVWN 178 (315)
T ss_pred cCCceEEEEc
Confidence 9999999997
No 29
>KOG0315|consensus
Probab=99.58 E-value=6.6e-14 Score=76.27 Aligned_cols=81 Identities=15% Similarity=0.211 Sum_probs=73.5
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCC-CEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTG-DWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
-.|+..++.|.+.+..+.++ |++.++++++.|+.+++|+...- +....+.+|.+.++..+|+.++.++++++.|+.
T Consensus 205 l~P~~k~~ah~~~il~C~lS---Pd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~ 281 (311)
T KOG0315|consen 205 LEPVHKFQAHNGHILRCLLS---PDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHT 281 (311)
T ss_pred ceEhhheecccceEEEEEEC---CCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCc
Confidence 35677889999999999999 79999999999999999998765 456778899999999999999999999999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
.++|+
T Consensus 282 ~rlW~ 286 (311)
T KOG0315|consen 282 ARLWD 286 (311)
T ss_pred eeecc
Confidence 99996
No 30
>KOG0285|consensus
Probab=99.57 E-value=3.4e-14 Score=80.62 Aligned_cols=81 Identities=23% Similarity=0.211 Sum_probs=75.9
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeE
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQA 84 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 84 (88)
-+..+.+++|.+.|.++++. |..+++++++.|+.+.+||+.++...-.+.+|...+..+++++...++.+++.|+.+
T Consensus 141 wKl~rVi~gHlgWVr~vavd---P~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~V 217 (460)
T KOG0285|consen 141 WKLYRVISGHLGWVRSVAVD---PGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQV 217 (460)
T ss_pred ceehhhhhhccceEEEEeeC---CCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCee
Confidence 35677889999999999999 678899999999999999999999989999999999999999999999999999999
Q ss_pred EEcC
Q psy6444 85 KALK 88 (88)
Q Consensus 85 ~~~~ 88 (88)
+.||
T Consensus 218 KCwD 221 (460)
T KOG0285|consen 218 KCWD 221 (460)
T ss_pred EEEe
Confidence 9997
No 31
>KOG0292|consensus
Probab=99.57 E-value=6.6e-15 Score=90.84 Aligned_cols=80 Identities=19% Similarity=0.138 Sum_probs=75.3
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEE
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK 85 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 85 (88)
..+..+.+|.++|..+.|+ +.+..++||+.|..|++|+..+.++++.+.+|-.-|+.+.|++...+++|++.|.+||
T Consensus 42 tli~rFdeHdGpVRgv~FH---~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIr 118 (1202)
T KOG0292|consen 42 TLIDRFDEHDGPVRGVDFH---PTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIR 118 (1202)
T ss_pred hHHhhhhccCCccceeeec---CCCCeEEecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccCCCeEE
Confidence 4456678899999999999 7999999999999999999999999999999999999999999999999999999999
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
+||
T Consensus 119 IWN 121 (1202)
T KOG0292|consen 119 IWN 121 (1202)
T ss_pred EEe
Confidence 997
No 32
>PTZ00420 coronin; Provisional
Probab=99.57 E-value=1.5e-13 Score=82.90 Aligned_cols=78 Identities=8% Similarity=0.046 Sum_probs=67.0
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCc-EEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEE
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGY-FLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK 85 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 85 (88)
++..+.+|...|.+++|+ +++. .+++++.|+.+++||+.++..+..+. +...|.+++|++++.++++++.|+.++
T Consensus 117 p~~~L~gH~~~V~sVaf~---P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~Ir 192 (568)
T PTZ00420 117 PQCILKGHKKKISIIDWN---PMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMH 192 (568)
T ss_pred ceEEeecCCCcEEEEEEC---CCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEE
Confidence 455678999999999999 5665 56789999999999999887666665 557899999999999999999999999
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
+||
T Consensus 193 IwD 195 (568)
T PTZ00420 193 IID 195 (568)
T ss_pred EEE
Confidence 997
No 33
>KOG0285|consensus
Probab=99.56 E-value=1.6e-14 Score=81.94 Aligned_cols=84 Identities=23% Similarity=0.296 Sum_probs=79.2
Q ss_pred CCccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCC
Q psy6444 2 ASIRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAAD 81 (88)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d 81 (88)
.+.++...++.||-+.|..++++ .-..++++++.|+.++.||+...+.++.+.+|-..|.+++.+|.-+.+++++.|
T Consensus 180 latg~LkltltGhi~~vr~vavS---~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grD 256 (460)
T KOG0285|consen 180 LATGQLKLTLTGHIETVRGVAVS---KRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRD 256 (460)
T ss_pred cccCeEEEeecchhheeeeeeec---ccCceEEEecCCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCc
Confidence 35778889999999999999999 688999999999999999999899999999999999999999999999999999
Q ss_pred CeEEEcC
Q psy6444 82 FQAKALK 88 (88)
Q Consensus 82 ~~i~~~~ 88 (88)
..+|+||
T Consensus 257 st~RvWD 263 (460)
T KOG0285|consen 257 STIRVWD 263 (460)
T ss_pred ceEEEee
Confidence 9999998
No 34
>KOG0265|consensus
Probab=99.56 E-value=5.7e-14 Score=77.92 Aligned_cols=80 Identities=19% Similarity=0.214 Sum_probs=71.7
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECC-CCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeE
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGD-TGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQA 84 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 84 (88)
.+...+.+|++.|..+.|+ |+|..+++++.|..|.+|++. ..+....+++|.++|..+.|..+++.+++++.|.++
T Consensus 38 ap~m~l~gh~geI~~~~F~---P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v 114 (338)
T KOG0265|consen 38 APIMLLPGHKGEIYTIKFH---PDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTV 114 (338)
T ss_pred chhhhcCCCcceEEEEEEC---CCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceE
Confidence 4556688999999999999 799999999999999999965 334566788999999999999999999999999999
Q ss_pred EEcC
Q psy6444 85 KALK 88 (88)
Q Consensus 85 ~~~~ 88 (88)
+.||
T Consensus 115 ~~wD 118 (338)
T KOG0265|consen 115 RGWD 118 (338)
T ss_pred EEEe
Confidence 9997
No 35
>KOG0315|consensus
Probab=99.56 E-value=6.1e-14 Score=76.43 Aligned_cols=81 Identities=17% Similarity=0.220 Sum_probs=70.7
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
+..|+.++.+|+..|..+.|. .+|++++++++||.+++||++....-+.+ .+...|..+..+|+.--++++..++.
T Consensus 72 np~Pv~t~e~h~kNVtaVgF~---~dgrWMyTgseDgt~kIWdlR~~~~qR~~-~~~spVn~vvlhpnQteLis~dqsg~ 147 (311)
T KOG0315|consen 72 NPNPVATFEGHTKNVTAVGFQ---CDGRWMYTGSEDGTVKIWDLRSLSCQRNY-QHNSPVNTVVLHPNQTELISGDQSGN 147 (311)
T ss_pred CCCceeEEeccCCceEEEEEe---ecCeEEEecCCCceEEEEeccCcccchhc-cCCCCcceEEecCCcceEEeecCCCc
Confidence 445899999999999999999 89999999999999999999874433333 36689999999999888999999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
|++||
T Consensus 148 irvWD 152 (311)
T KOG0315|consen 148 IRVWD 152 (311)
T ss_pred EEEEE
Confidence 99997
No 36
>KOG0273|consensus
Probab=99.56 E-value=3.9e-14 Score=82.28 Aligned_cols=81 Identities=19% Similarity=0.229 Sum_probs=74.3
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCC---------eE
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDAS---------KA 75 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------~~ 75 (88)
..|+.++.+|+++|.++.|+ +.+.+|++++.|+++++|..........+.+|...|..+.|+|.+. .+
T Consensus 349 ~~P~~t~~GH~g~V~alk~n---~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l 425 (524)
T KOG0273|consen 349 DRPVKTFIGHHGEVNALKWN---PTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLML 425 (524)
T ss_pred CCcceeeecccCceEEEEEC---CCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceE
Confidence 45788999999999999999 7999999999999999999888888899999999999999999744 78
Q ss_pred EEecCCCeEEEcC
Q psy6444 76 ASGAADFQAKALK 88 (88)
Q Consensus 76 ~~~~~d~~i~~~~ 88 (88)
++++.|+++++||
T Consensus 426 ~sas~dstV~lwd 438 (524)
T KOG0273|consen 426 ASASFDSTVKLWD 438 (524)
T ss_pred EEeecCCeEEEEE
Confidence 8999999999997
No 37
>KOG0645|consensus
Probab=99.55 E-value=2.2e-13 Score=74.83 Aligned_cols=80 Identities=24% Similarity=0.238 Sum_probs=72.7
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC---EEEEecCCCCeEEEEEECCCCCeEEEecCCC
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD---WIGTFEGHKGCVWGVDINKDASKAASGAADF 82 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~ 82 (88)
+.+.+++||...|-+++|+ .+|++|++++.|+++.+|.+.... .+..++.|..-|..+.|+|...++++++.|.
T Consensus 96 ecv~~lEGHEnEVK~Vaws---~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDn 172 (312)
T KOG0645|consen 96 ECVATLEGHENEVKCVAWS---ASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDN 172 (312)
T ss_pred eEEeeeeccccceeEEEEc---CCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCC
Confidence 5688999999999999999 899999999999999999987443 5577889999999999999999999999999
Q ss_pred eEEEcC
Q psy6444 83 QAKALK 88 (88)
Q Consensus 83 ~i~~~~ 88 (88)
+|++|.
T Consensus 173 TIk~~~ 178 (312)
T KOG0645|consen 173 TIKVYR 178 (312)
T ss_pred eEEEEe
Confidence 999984
No 38
>KOG0316|consensus
Probab=99.55 E-value=8.5e-14 Score=75.45 Aligned_cols=82 Identities=20% Similarity=0.189 Sum_probs=77.1
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
+.+.+..+.+++++|..++|+ -+|++.+++++|..+++|+...+..+..+.+|...|...+.+.|+..+++++.|..
T Consensus 6 ptkr~~~l~~~qgaV~avryN---~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~ 82 (307)
T KOG0316|consen 6 PTKRLSILDCAQGAVRAVRYN---VDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKA 82 (307)
T ss_pred cchhceeecccccceEEEEEc---cCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCce
Confidence 445677889999999999999 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
+.+||
T Consensus 83 v~vwD 87 (307)
T KOG0316|consen 83 VQVWD 87 (307)
T ss_pred EEEEE
Confidence 99997
No 39
>KOG0265|consensus
Probab=99.54 E-value=7.5e-14 Score=77.47 Aligned_cols=78 Identities=23% Similarity=0.269 Sum_probs=70.6
Q ss_pred eEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEE-EecCCCeEEE
Q psy6444 8 PLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAA-SGAADFQAKA 86 (88)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d~~i~~ 86 (88)
.-++++|.++|..+.|. .++..+++++.|+.+..||+.+++.++.+++|.+.+..+..+..|..++ +++.|+++++
T Consensus 83 ~~~lkgHsgAVM~l~~~---~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl 159 (338)
T KOG0265|consen 83 FWVLKGHSGAVMELHGM---RDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKL 159 (338)
T ss_pred eeeeccccceeEeeeec---cCCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEE
Confidence 44677999999999999 8999999999999999999999999999999999999988666677666 7889999999
Q ss_pred cC
Q psy6444 87 LK 88 (88)
Q Consensus 87 ~~ 88 (88)
||
T Consensus 160 ~D 161 (338)
T KOG0265|consen 160 WD 161 (338)
T ss_pred Ee
Confidence 97
No 40
>KOG0645|consensus
Probab=99.54 E-value=2.1e-13 Score=74.90 Aligned_cols=73 Identities=27% Similarity=0.376 Sum_probs=66.5
Q ss_pred CCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCC--CEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 13 GHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTG--DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 13 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
+|+..|+.++|+ |.|+++++++.|..+.+|.-..+ +++..+.+|.+.|.+++|+++|.++++++.|.++-+|.
T Consensus 59 ~hkrsVRsvAws---p~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe 133 (312)
T KOG0645|consen 59 GHKRSVRSVAWS---PHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWE 133 (312)
T ss_pred cchheeeeeeec---CCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEE
Confidence 488999999999 79999999999999999976544 36788999999999999999999999999999999883
No 41
>KOG0273|consensus
Probab=99.53 E-value=2e-13 Score=79.46 Aligned_cols=82 Identities=28% Similarity=0.351 Sum_probs=70.8
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEE------------------------------
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWI------------------------------ 53 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------ 53 (88)
++..+.+|..|+++|..+.|+ ..|.++++++.|+.+.+||..++...
T Consensus 265 ~G~l~~tl~~HkgPI~slKWn---k~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i 341 (524)
T KOG0273|consen 265 DGNLISTLGQHKGPIFSLKWN---KKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCI 341 (524)
T ss_pred CchhhhhhhccCCceEEEEEc---CCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceE
Confidence 456777888999999999999 89999999999999999988543221
Q ss_pred -----------EEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 54 -----------GTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 54 -----------~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
..+.+|.+.|.++.|+|.+.++++++.|+++++|.
T Consensus 342 ~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs 387 (524)
T KOG0273|consen 342 HVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWS 387 (524)
T ss_pred EEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeee
Confidence 23358899999999999999999999999999995
No 42
>KOG0286|consensus
Probab=99.52 E-value=5.8e-13 Score=73.92 Aligned_cols=79 Identities=18% Similarity=0.189 Sum_probs=72.8
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEE
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
..++|++|.+.|.++.|+ ++.+.+++++.||.+.+||..+...++.+.-....|...+|+|.+..+++++-|+.+.+
T Consensus 47 ~rr~LkGH~~Ki~~~~ws---~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csi 123 (343)
T KOG0286|consen 47 TRRTLKGHLNKIYAMDWS---TDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSI 123 (343)
T ss_pred eEEEecccccceeeeEec---CCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEE
Confidence 458899999999999999 89999999999999999999888888888888889999999999999999999998887
Q ss_pred cC
Q psy6444 87 LK 88 (88)
Q Consensus 87 ~~ 88 (88)
|+
T Consensus 124 y~ 125 (343)
T KOG0286|consen 124 YP 125 (343)
T ss_pred Ee
Confidence 74
No 43
>KOG0276|consensus
Probab=99.52 E-value=3.3e-14 Score=85.17 Aligned_cols=83 Identities=22% Similarity=0.194 Sum_probs=74.3
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeE
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQA 84 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 84 (88)
..+.++|++|...|.|+.|-+. .+...++++..|..+++||.++..+++.+.+|...|..+.|+|.-..+++++.||++
T Consensus 173 ~~~nfTl~gHekGVN~Vdyy~~-gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTv 251 (794)
T KOG0276|consen 173 PHPNFTLEGHEKGVNCVDYYTG-GDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTV 251 (794)
T ss_pred CCCceeeeccccCcceEEeccC-CCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccE
Confidence 3567899999999999999620 222599999999999999999999999999999999999999999999999999999
Q ss_pred EEcC
Q psy6444 85 KALK 88 (88)
Q Consensus 85 ~~~~ 88 (88)
|+|+
T Consensus 252 riWh 255 (794)
T KOG0276|consen 252 RIWN 255 (794)
T ss_pred EEec
Confidence 9995
No 44
>KOG0284|consensus
Probab=99.52 E-value=1.7e-14 Score=82.61 Aligned_cols=79 Identities=22% Similarity=0.161 Sum_probs=71.0
Q ss_pred eeEEecCCC-CCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEE
Q psy6444 7 IPLTCSGHT-RPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK 85 (88)
Q Consensus 7 ~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 85 (88)
.++..++|. ..|.+++|+ ++-..+++++.|+.+++||....+....+.+|...+.+++|+|...+++++++|..++
T Consensus 171 nVk~~~ahh~eaIRdlafS---pnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVK 247 (464)
T KOG0284|consen 171 NVKIIQAHHAEAIRDLAFS---PNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVK 247 (464)
T ss_pred hhHHhhHhhhhhhheeccC---CCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeE
Confidence 344455655 889999999 6778999999999999999998888888999999999999999999999999999999
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
+||
T Consensus 248 lWD 250 (464)
T KOG0284|consen 248 LWD 250 (464)
T ss_pred eec
Confidence 998
No 45
>KOG0302|consensus
Probab=99.51 E-value=7.2e-14 Score=79.54 Aligned_cols=78 Identities=22% Similarity=0.193 Sum_probs=67.2
Q ss_pred EEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC--EEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEE
Q psy6444 9 LTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD--WIGTFEGHKGCVWGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 9 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
+.+.+|+..|..++|+| .....+++++.|++|++||++.+. .....+.|.+-|+.+.|+.+-.++++++.||++++
T Consensus 251 ~Pf~gH~~SVEDLqWSp--tE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~i 328 (440)
T KOG0302|consen 251 RPFTGHTKSVEDLQWSP--TEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSI 328 (440)
T ss_pred ccccccccchhhhccCC--ccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEE
Confidence 34678999999999997 777899999999999999998762 22233779999999999998888999999999999
Q ss_pred cC
Q psy6444 87 LK 88 (88)
Q Consensus 87 ~~ 88 (88)
||
T Consensus 329 wD 330 (440)
T KOG0302|consen 329 WD 330 (440)
T ss_pred EE
Confidence 97
No 46
>KOG0292|consensus
Probab=99.51 E-value=1.7e-13 Score=84.81 Aligned_cols=82 Identities=18% Similarity=0.208 Sum_probs=77.5
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
....+.+|.||...|..+.|+ +.-.|++|++.|.+|++|+-+++.++..+.||.--|.+-+|+|...+++|++-|.+
T Consensus 82 ~rrclftL~GHlDYVRt~~FH---heyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQT 158 (1202)
T KOG0292|consen 82 TRRCLFTLLGHLDYVRTVFFH---HEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQT 158 (1202)
T ss_pred cceehhhhccccceeEEeecc---CCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccce
Confidence 346788999999999999999 78899999999999999999999999999999999999999999999999999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
+|+||
T Consensus 159 VRVWD 163 (1202)
T KOG0292|consen 159 VRVWD 163 (1202)
T ss_pred EEEEe
Confidence 99998
No 47
>KOG0276|consensus
Probab=99.50 E-value=2.8e-13 Score=81.31 Aligned_cols=81 Identities=26% Similarity=0.207 Sum_probs=74.6
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCC--CeEEEecCCCe
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDA--SKAASGAADFQ 83 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~d~~ 83 (88)
.+.++++||+-.|.+++|+| .+.+.+++++-|+++++|.+....+.+++.+|.+.|+++++-+.+ .++++++.|.+
T Consensus 131 a~~qtfeGH~HyVMqv~fnP--kD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~t 208 (794)
T KOG0276|consen 131 ACEQTFEGHEHYVMQVAFNP--KDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLT 208 (794)
T ss_pred eeeeEEcCcceEEEEEEecC--CCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCce
Confidence 46788999999999999998 788999999999999999998888889999999999999998854 48999999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
+++||
T Consensus 209 iKvWD 213 (794)
T KOG0276|consen 209 IKVWD 213 (794)
T ss_pred EEEee
Confidence 99998
No 48
>KOG1407|consensus
Probab=99.50 E-value=9.9e-14 Score=75.93 Aligned_cols=79 Identities=14% Similarity=0.095 Sum_probs=72.8
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeE
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQA 84 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 84 (88)
-+++.+++.|.....|+.|+ |+|++++.|+.|-.+.+||++.-.+++.+..+...|+.+.|+++|++++++++|..|
T Consensus 179 Lkpv~si~AH~snCicI~f~---p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~I 255 (313)
T KOG1407|consen 179 LKPVQSIKAHPSNCICIEFD---PDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFI 255 (313)
T ss_pred cccccccccCCcceEEEEEC---CCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceE
Confidence 36788999999999999999 799999999999999999998777889999999999999999999999999999887
Q ss_pred EE
Q psy6444 85 KA 86 (88)
Q Consensus 85 ~~ 86 (88)
-+
T Consensus 256 DI 257 (313)
T KOG1407|consen 256 DI 257 (313)
T ss_pred Ee
Confidence 54
No 49
>KOG0277|consensus
Probab=99.50 E-value=7.6e-13 Score=72.37 Aligned_cols=84 Identities=21% Similarity=0.215 Sum_probs=72.9
Q ss_pred CccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECC-CCCeEEEecCC
Q psy6444 3 SIRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINK-DASKAASGAAD 81 (88)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d 81 (88)
..++.+.++++|...|....|+| ..++.+++++.|+.+++||++.......+..|...+.+..|+. +...+++++.|
T Consensus 135 ~r~~Sv~Tf~gh~~~Iy~a~~sp--~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd 212 (311)
T KOG0277|consen 135 NRPNSVQTFNGHNSCIYQAAFSP--HIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVD 212 (311)
T ss_pred CCCcceEeecCCccEEEEEecCC--CCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCC
Confidence 45678899999999999999998 8889999999999999999875443344888999999999987 56677899999
Q ss_pred CeEEEcC
Q psy6444 82 FQAKALK 88 (88)
Q Consensus 82 ~~i~~~~ 88 (88)
+.+|+||
T Consensus 213 ~~vr~wD 219 (311)
T KOG0277|consen 213 NLVRGWD 219 (311)
T ss_pred ceEEEEe
Confidence 9999997
No 50
>KOG0278|consensus
Probab=99.50 E-value=1.7e-13 Score=74.89 Aligned_cols=69 Identities=26% Similarity=0.308 Sum_probs=62.6
Q ss_pred CEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEe-cCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 17 PVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTF-EGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 17 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
.|.+.+++ |+.+.+++++.|..+..||..++..+..+ ++|.+.|.+++|+|+|...++++.||+||+|+
T Consensus 226 nV~SASL~---P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQ 295 (334)
T KOG0278|consen 226 NVESASLH---PKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQ 295 (334)
T ss_pred cccccccc---CCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEE
Confidence 35566677 67799999999999999999999998886 88999999999999999999999999999995
No 51
>KOG0295|consensus
Probab=99.48 E-value=1.4e-12 Score=74.07 Aligned_cols=84 Identities=25% Similarity=0.298 Sum_probs=78.4
Q ss_pred CCccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCC
Q psy6444 2 ASIRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAAD 81 (88)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d 81 (88)
++.+..+.++.+|...|..++|+ +.|++++++.+|+++++||+.+..+...+..|..-+..++|..+..++++++-|
T Consensus 321 v~tg~cL~tL~ghdnwVr~~af~---p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVd 397 (406)
T KOG0295|consen 321 VSTGMCLFTLVGHDNWVRGVAFS---PGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVD 397 (406)
T ss_pred ccCCeEEEEEecccceeeeeEEc---CCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEecccc
Confidence 35678899999999999999999 799999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEcC
Q psy6444 82 FQAKALK 88 (88)
Q Consensus 82 ~~i~~~~ 88 (88)
.++++|.
T Consensus 398 qt~KvwE 404 (406)
T KOG0295|consen 398 QTVKVWE 404 (406)
T ss_pred ceeeeee
Confidence 9999984
No 52
>KOG0973|consensus
Probab=99.48 E-value=3.2e-13 Score=84.05 Aligned_cols=80 Identities=21% Similarity=0.287 Sum_probs=76.3
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEE
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK 85 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 85 (88)
+.+..+.+|.+.|.++.|+ +++.++++++.|++|.+|+..+...+..+.+|.+.|..+.|.|-|+++++.+.|++++
T Consensus 120 k~~~~l~~H~~DV~Dv~Ws---p~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtik 196 (942)
T KOG0973|consen 120 KVVSILRGHDSDVLDVNWS---PDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLK 196 (942)
T ss_pred eEEEEEecCCCccceeccC---CCccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEE
Confidence 5788899999999999999 7999999999999999999998888999999999999999999999999999999999
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
+|+
T Consensus 197 vwr 199 (942)
T KOG0973|consen 197 VWR 199 (942)
T ss_pred EEE
Confidence 995
No 53
>KOG0281|consensus
Probab=99.48 E-value=2.1e-14 Score=81.43 Aligned_cols=79 Identities=24% Similarity=0.341 Sum_probs=70.7
Q ss_pred CccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCC
Q psy6444 3 SIRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADF 82 (88)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~ 82 (88)
++...++++.+|+..+.|+.+. ++++++|+.|.+|++|++..|.+++.+++|...|.++.|. ...+++++.||
T Consensus 348 st~efvRtl~gHkRGIAClQYr-----~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd--~krIVSGaYDG 420 (499)
T KOG0281|consen 348 STCEFVRTLNGHKRGIACLQYR-----DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDG 420 (499)
T ss_pred cceeeehhhhcccccceehhcc-----CeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeec--Cceeeeccccc
Confidence 4566788999999999998874 8899999999999999999999999999999999999985 55788999999
Q ss_pred eEEEcC
Q psy6444 83 QAKALK 88 (88)
Q Consensus 83 ~i~~~~ 88 (88)
+|++||
T Consensus 421 kikvWd 426 (499)
T KOG0281|consen 421 KIKVWD 426 (499)
T ss_pred eEEEEe
Confidence 999997
No 54
>KOG0319|consensus
Probab=99.48 E-value=4.8e-13 Score=81.10 Aligned_cols=82 Identities=27% Similarity=0.287 Sum_probs=77.2
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
+...++++.||+..|....|- .++..++|++.||.+++|++.++.++..+..|..+|++++-++....+.+++.|+.
T Consensus 536 ~fSClkT~eGH~~aVlra~F~---~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~ 612 (775)
T KOG0319|consen 536 TFSCLKTFEGHTSAVLRASFI---RNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGR 612 (775)
T ss_pred cceeeeeecCccceeEeeeee---eCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeE
Confidence 456789999999999999999 79999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
+.+|.
T Consensus 613 i~~wk 617 (775)
T KOG0319|consen 613 IIFWK 617 (775)
T ss_pred EEEee
Confidence 99983
No 55
>KOG0281|consensus
Probab=99.47 E-value=1.4e-13 Score=78.15 Aligned_cols=76 Identities=17% Similarity=0.215 Sum_probs=68.8
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEE
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK 85 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 85 (88)
..++.+.||++.|.|+.|. .+.+++|+.|.++.+||+.+++.+..+-.|...|.++.|+. .+++++++|.+++
T Consensus 228 ~c~~~L~GHtGSVLCLqyd-----~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~n--g~mvtcSkDrsia 300 (499)
T KOG0281|consen 228 ECLKILTGHTGSVLCLQYD-----ERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSN--GYMVTCSKDRSIA 300 (499)
T ss_pred HHHHhhhcCCCcEEeeecc-----ceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeC--CEEEEecCCceeE
Confidence 3567789999999999986 56999999999999999999999999999999999999974 4788999999999
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
+||
T Consensus 301 VWd 303 (499)
T KOG0281|consen 301 VWD 303 (499)
T ss_pred EEe
Confidence 997
No 56
>KOG0296|consensus
Probab=99.46 E-value=1.4e-12 Score=74.05 Aligned_cols=81 Identities=21% Similarity=0.304 Sum_probs=75.7
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeE
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQA 84 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 84 (88)
...+.++..|+..|.+++.+ |+.+++++|+.|-.-.+|++.++..+..+.+|+..|.++.|++++.+++++..++.+
T Consensus 54 DdS~~tF~~H~~svFavsl~---P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v 130 (399)
T KOG0296|consen 54 DDSLVTFDKHTDSVFAVSLH---PNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKV 130 (399)
T ss_pred ccceeehhhcCCceEEEEeC---CCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccE
Confidence 34577899999999999999 788999999999999999999999999999999999999999999999999999999
Q ss_pred EEcC
Q psy6444 85 KALK 88 (88)
Q Consensus 85 ~~~~ 88 (88)
++|+
T Consensus 131 ~v~~ 134 (399)
T KOG0296|consen 131 LVFK 134 (399)
T ss_pred EEEE
Confidence 9984
No 57
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.46 E-value=1.9e-12 Score=70.77 Aligned_cols=78 Identities=32% Similarity=0.436 Sum_probs=70.1
Q ss_pred eEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEc
Q psy6444 8 PLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKAL 87 (88)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 87 (88)
+.++++|..+|.++.|+ ++++.+++++.++.+.+|+...+.....+..+...+..+.|++++..+++++.++.+++|
T Consensus 2 ~~~~~~h~~~i~~~~~~---~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~ 78 (289)
T cd00200 2 RRTLKGHTGGVTCVAFS---PDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLW 78 (289)
T ss_pred chHhcccCCCEEEEEEc---CCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEE
Confidence 35677899999999999 789999999999999999998877777888888888899999999999999999999999
Q ss_pred C
Q psy6444 88 K 88 (88)
Q Consensus 88 ~ 88 (88)
|
T Consensus 79 ~ 79 (289)
T cd00200 79 D 79 (289)
T ss_pred E
Confidence 6
No 58
>KOG0291|consensus
Probab=99.46 E-value=8.1e-13 Score=80.59 Aligned_cols=82 Identities=26% Similarity=0.237 Sum_probs=70.9
Q ss_pred CccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC-EEEEecCCCCeEEEEEECCCCCeEEEecCC
Q psy6444 3 SIRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD-WIGTFEGHKGCVWGVDINKDASKAASGAAD 81 (88)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d 81 (88)
.+|+.+..|.||.++|.++.|+ +.+..+++++.|++|++|++-... ....+. ....+..++|+|+|..++.+.-|
T Consensus 466 qTGqllDiLsGHEgPVs~l~f~---~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~-i~sdvl~vsfrPdG~elaVaTld 541 (893)
T KOG0291|consen 466 QTGQLLDILSGHEGPVSGLSFS---PDGSLLASGSWDKTVRIWDIFSSSGTVETLE-IRSDVLAVSFRPDGKELAVATLD 541 (893)
T ss_pred ecCeeeehhcCCCCcceeeEEc---cccCeEEeccccceEEEEEeeccCceeeeEe-eccceeEEEEcCCCCeEEEEEec
Confidence 4688899999999999999999 799999999999999999986543 233333 55678999999999999999999
Q ss_pred CeEEEcC
Q psy6444 82 FQAKALK 88 (88)
Q Consensus 82 ~~i~~~~ 88 (88)
|.|.+||
T Consensus 542 gqItf~d 548 (893)
T KOG0291|consen 542 GQITFFD 548 (893)
T ss_pred ceEEEEE
Confidence 9999997
No 59
>KOG0647|consensus
Probab=99.46 E-value=1e-12 Score=73.14 Aligned_cols=76 Identities=18% Similarity=0.185 Sum_probs=67.4
Q ss_pred EEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCC--eEEEecCCCeEEE
Q psy6444 9 LTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDAS--KAASGAADFQAKA 86 (88)
Q Consensus 9 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~d~~i~~ 86 (88)
+....|.++|.+++|+ .+|..+++++.|+.+++||+.++ ....+..|.+.|..+.|.+... .+++++.|.+|+.
T Consensus 66 ka~~~~~~PvL~v~Ws---ddgskVf~g~~Dk~~k~wDL~S~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKf 141 (347)
T KOG0647|consen 66 KAQQSHDGPVLDVCWS---DDGSKVFSGGCDKQAKLWDLASG-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKF 141 (347)
T ss_pred hhhhccCCCeEEEEEc---cCCceEEeeccCCceEEEEccCC-CeeeeeecccceeEEEEecCCCcceeEecccccceee
Confidence 3455688999999999 89999999999999999999977 5678888999999999977655 8889999999999
Q ss_pred cC
Q psy6444 87 LK 88 (88)
Q Consensus 87 ~~ 88 (88)
||
T Consensus 142 WD 143 (347)
T KOG0647|consen 142 WD 143 (347)
T ss_pred cc
Confidence 98
No 60
>KOG0282|consensus
Probab=99.45 E-value=2.1e-13 Score=79.35 Aligned_cols=81 Identities=23% Similarity=0.265 Sum_probs=72.8
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCC-CeEEEecCCC
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDA-SKAASGAADF 82 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~ 82 (88)
.+..++++.+|..+|..++|+ .+|..+.+++.|+.+++||+.+|.++..+.. ...+.++.|+|++ +.+++++.|+
T Consensus 247 ~~~~lrtf~gH~k~Vrd~~~s---~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~-~~~~~cvkf~pd~~n~fl~G~sd~ 322 (503)
T KOG0282|consen 247 DRRCLRTFKGHRKPVRDASFN---NCGTSFLSASFDRFLKLWDTETGQVLSRFHL-DKVPTCVKFHPDNQNIFLVGGSDK 322 (503)
T ss_pred Ccceehhhhcchhhhhhhhcc---ccCCeeeeeecceeeeeeccccceEEEEEec-CCCceeeecCCCCCcEEEEecCCC
Confidence 467899999999999999999 8999999999999999999999999888874 3556889999988 6778999999
Q ss_pred eEEEcC
Q psy6444 83 QAKALK 88 (88)
Q Consensus 83 ~i~~~~ 88 (88)
.|+.||
T Consensus 323 ki~~wD 328 (503)
T KOG0282|consen 323 KIRQWD 328 (503)
T ss_pred cEEEEe
Confidence 999997
No 61
>KOG1273|consensus
Probab=99.44 E-value=5.1e-13 Score=74.97 Aligned_cols=68 Identities=19% Similarity=0.250 Sum_probs=63.9
Q ss_pred EEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 18 VVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 18 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
..|+.|+ +.|..++.|+.+|.+.+||+.+...-+.+.+|...|.+++|+++|+.+++++.|..+.+||
T Consensus 26 a~~~~Fs---~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwD 93 (405)
T KOG1273|consen 26 AECCQFS---RWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWD 93 (405)
T ss_pred cceEEec---cCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEe
Confidence 6789999 8999999999999999999988776678889999999999999999999999999999997
No 62
>KOG0264|consensus
Probab=99.44 E-value=7.2e-13 Score=76.37 Aligned_cols=81 Identities=22% Similarity=0.164 Sum_probs=69.9
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCC--CCEEEEecCCCCeEEEEEECCCCC-eEEEecCCC
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDT--GDWIGTFEGHKGCVWGVDINKDAS-KAASGAADF 82 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~ 82 (88)
.+...+.+|...|..++|+| .....+++++.|+.+.+||.++ .+......+|.+.+++++|+|-+. .+|+++.|+
T Consensus 218 ~p~~~~~~h~~~VeDV~~h~--~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~ 295 (422)
T KOG0264|consen 218 DPKTIFSGHEDVVEDVAWHP--LHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADK 295 (422)
T ss_pred cceEEeecCCcceehhhccc--cchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCC
Confidence 35667889999999999998 7788999999999999999984 455566788999999999999655 567899999
Q ss_pred eEEEcC
Q psy6444 83 QAKALK 88 (88)
Q Consensus 83 ~i~~~~ 88 (88)
++.+||
T Consensus 296 tV~LwD 301 (422)
T KOG0264|consen 296 TVALWD 301 (422)
T ss_pred cEEEee
Confidence 999997
No 63
>KOG0278|consensus
Probab=99.44 E-value=2.5e-13 Score=74.27 Aligned_cols=83 Identities=75% Similarity=1.238 Sum_probs=75.9
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEE
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK 85 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 85 (88)
+...++.+|+.+|..++|+|+.++|-+|+++++|+...+..-.++.++..+.+|++.|+...++.+....++++.|-+-+
T Consensus 5 ~~pl~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftak 84 (334)
T KOG0278|consen 5 QTPLTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAK 84 (334)
T ss_pred cCceEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhh
Confidence 34457789999999999999999999999999999999998889999999999999999999988888888999999888
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
+||
T Consensus 85 vw~ 87 (334)
T KOG0278|consen 85 VWD 87 (334)
T ss_pred hhh
Confidence 886
No 64
>KOG0294|consensus
Probab=99.43 E-value=2.1e-12 Score=72.33 Aligned_cols=82 Identities=20% Similarity=0.218 Sum_probs=72.2
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCC--cEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCC
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESG--YFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAAD 81 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d 81 (88)
..+.+..+..|.+.+.++.|. ++. .+|+++..||.+.+|++..=..+..+++|.++|+.++.+|.+.+.++.+.|
T Consensus 72 k~~qlg~ll~HagsitaL~F~---~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D 148 (362)
T KOG0294|consen 72 KRKQLGILLSHAGSITALKFY---PPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGD 148 (362)
T ss_pred chhhhcceeccccceEEEEec---CCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCC
Confidence 345566777899999999998 344 499999999999999997667788999999999999999999999999999
Q ss_pred CeEEEcC
Q psy6444 82 FQAKALK 88 (88)
Q Consensus 82 ~~i~~~~ 88 (88)
+.+|.||
T Consensus 149 ~~lr~WN 155 (362)
T KOG0294|consen 149 QVLRTWN 155 (362)
T ss_pred ceeeeeh
Confidence 9999997
No 65
>KOG0289|consensus
Probab=99.43 E-value=1.4e-12 Score=75.55 Aligned_cols=70 Identities=20% Similarity=0.237 Sum_probs=66.3
Q ss_pred CCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 16 RPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
-.+.+.+|+ ++|-.+..+..|+.+++||+.+...+..|.+|.+.|..++|+.+|.++++++.|+.+++||
T Consensus 348 v~~ts~~fH---pDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwD 417 (506)
T KOG0289|consen 348 VEYTSAAFH---PDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWD 417 (506)
T ss_pred ceeEEeeEc---CCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEE
Confidence 347889999 7999999999999999999999889999999999999999999999999999999999997
No 66
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.42 E-value=1e-11 Score=77.78 Aligned_cols=82 Identities=22% Similarity=0.254 Sum_probs=70.2
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEEC-CCCCeEEEecCCC
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDIN-KDASKAASGAADF 82 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~d~ 82 (88)
.++.+..+.+|.+.|.+++|+| .++..+++++.|+.+++|++..+..+..+..+ ..+.++.|+ +++..+++++.|+
T Consensus 564 ~~~~~~~~~~H~~~V~~l~~~p--~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg 640 (793)
T PLN00181 564 RSQLVTEMKEHEKRVWSIDYSS--ADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSADH 640 (793)
T ss_pred CCeEEEEecCCCCCEEEEEEcC--CCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCC
Confidence 3566778889999999999995 57899999999999999999888877777654 568888884 5788999999999
Q ss_pred eEEEcC
Q psy6444 83 QAKALK 88 (88)
Q Consensus 83 ~i~~~~ 88 (88)
.|++||
T Consensus 641 ~I~iwD 646 (793)
T PLN00181 641 KVYYYD 646 (793)
T ss_pred eEEEEE
Confidence 999997
No 67
>KOG0275|consensus
Probab=99.42 E-value=1.5e-13 Score=77.58 Aligned_cols=81 Identities=23% Similarity=0.276 Sum_probs=74.1
Q ss_pred cceeEEec-CCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 5 RQIPLTCS-GHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 5 ~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
|..++.+. .|+..|.|+.|+ .++..+.+++.|..+++.-+.+++.+..+.+|..-|+...|.++|..+++++.|++
T Consensus 295 G~ClRrFdrAHtkGvt~l~FS---rD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgt 371 (508)
T KOG0275|consen 295 GQCLRRFDRAHTKGVTCLSFS---RDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGT 371 (508)
T ss_pred chHHHHhhhhhccCeeEEEEc---cCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCcc
Confidence 44555555 689999999999 79999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
+++|+
T Consensus 372 vkvW~ 376 (508)
T KOG0275|consen 372 VKVWH 376 (508)
T ss_pred EEEec
Confidence 99996
No 68
>KOG0642|consensus
Probab=99.42 E-value=3.5e-12 Score=75.56 Aligned_cols=82 Identities=21% Similarity=0.230 Sum_probs=71.4
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCC----------CEEEEecCCCCeEEEEEECCCCC
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTG----------DWIGTFEGHKGCVWGVDINKDAS 73 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~i~~~~~~~~~~ 73 (88)
.-+++.++.+|.++|.|+++. .+++.+++++-|+.|+.|++... .....+.||..+++.++++....
T Consensus 333 ~~epi~tfraH~gPVl~v~v~---~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~ 409 (577)
T KOG0642|consen 333 DVEPILTFRAHEGPVLCVVVP---SNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKD 409 (577)
T ss_pred ceeeeEEEecccCceEEEEec---CCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeeccccc
Confidence 346888999999999999998 89999999999999999955421 23356789999999999999999
Q ss_pred eEEEecCCCeEEEcC
Q psy6444 74 KAASGAADFQAKALK 88 (88)
Q Consensus 74 ~~~~~~~d~~i~~~~ 88 (88)
.+++++.|+++|.|+
T Consensus 410 ~Llscs~DgTvr~w~ 424 (577)
T KOG0642|consen 410 RLLSCSSDGTVRLWE 424 (577)
T ss_pred ceeeecCCceEEeec
Confidence 999999999999995
No 69
>KOG0269|consensus
Probab=99.42 E-value=5.4e-13 Score=81.29 Aligned_cols=80 Identities=19% Similarity=0.162 Sum_probs=70.0
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC-EEEEecCCCCeEEEEEECCCCCeEEEecCCCeEE
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD-WIGTFEGHKGCVWGVDINKDASKAASGAADFQAK 85 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 85 (88)
...++.+-...|.++.|+| ..+..++++..+|.+.+||++... +..++..|.+.+.++.|+|++.++++|+.|+.++
T Consensus 168 S~~t~~~nSESiRDV~fsp--~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vk 245 (839)
T KOG0269|consen 168 SKSTFRSNSESIRDVKFSP--GYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVK 245 (839)
T ss_pred ccccccccchhhhceeecc--CCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEE
Confidence 3445555567799999998 888999999999999999997544 5677889999999999999999999999999999
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
+||
T Consensus 246 iWd 248 (839)
T KOG0269|consen 246 IWD 248 (839)
T ss_pred EEe
Confidence 997
No 70
>KOG0310|consensus
Probab=99.42 E-value=1.4e-12 Score=75.96 Aligned_cols=80 Identities=21% Similarity=0.194 Sum_probs=69.7
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCC-eEEEecCCCeEE
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDAS-KAASGAADFQAK 85 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~ 85 (88)
.++.+++|+.++..+.|+| -+...+.+++.|+.+++|++.+......+.+|+..|++.+++|... .+++++.|++||
T Consensus 102 iLR~~~ah~apv~~~~f~~--~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vr 179 (487)
T KOG0310|consen 102 ILRQLYAHQAPVHVTKFSP--QDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVR 179 (487)
T ss_pred HHHHHhhccCceeEEEecc--cCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEE
Confidence 4667889999999999996 6667888999999999999987776568899999999999999755 567999999999
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
+||
T Consensus 180 l~D 182 (487)
T KOG0310|consen 180 LWD 182 (487)
T ss_pred EEE
Confidence 997
No 71
>KOG0308|consensus
Probab=99.41 E-value=2.9e-12 Score=77.13 Aligned_cols=81 Identities=19% Similarity=0.218 Sum_probs=73.4
Q ss_pred cceeEEec-CCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 5 RQIPLTCS-GHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 5 ~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
......+. |+...+.+++.+ +.|..+++|+..+.+++||..+...+..+.+|..-|..+..+.+|..+++++.|++
T Consensus 160 ~~t~~sl~sG~k~siYSLA~N---~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgt 236 (735)
T KOG0308|consen 160 NVTVNSLGSGPKDSIYSLAMN---QTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGT 236 (735)
T ss_pred ccccccCCCCCccceeeeecC---CcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCce
Confidence 34445555 788999999998 78889999999999999999999999999999999999999999999999999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
|++||
T Consensus 237 IrlWd 241 (735)
T KOG0308|consen 237 IRLWD 241 (735)
T ss_pred EEeee
Confidence 99997
No 72
>KOG0313|consensus
Probab=99.41 E-value=3.9e-12 Score=72.61 Aligned_cols=80 Identities=21% Similarity=0.229 Sum_probs=70.9
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
.+.++.++.||+++|..+.|+ +...+++++.|++|+.||+..+.....+.+. ..+.+++.++...++++++.|..
T Consensus 249 ~r~P~vtl~GHt~~Vs~V~w~----d~~v~yS~SwDHTIk~WDletg~~~~~~~~~-ksl~~i~~~~~~~Ll~~gssdr~ 323 (423)
T KOG0313|consen 249 TRTPLVTLEGHTEPVSSVVWS----DATVIYSVSWDHTIKVWDLETGGLKSTLTTN-KSLNCISYSPLSKLLASGSSDRH 323 (423)
T ss_pred ccCceEEecccccceeeEEEc----CCCceEeecccceEEEEEeecccceeeeecC-cceeEeecccccceeeecCCCCc
Confidence 456889999999999999998 4789999999999999999988877666643 56788999999999999999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
+|+||
T Consensus 324 irl~D 328 (423)
T KOG0313|consen 324 IRLWD 328 (423)
T ss_pred eeecC
Confidence 99997
No 73
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.41 E-value=1.8e-11 Score=66.92 Aligned_cols=81 Identities=31% Similarity=0.409 Sum_probs=71.2
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeE
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQA 84 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 84 (88)
++.+..+..|...+.++.|+ +++..+++++.++.+.+|+...+.....+..+...+..++|++++..+++++.|+.+
T Consensus 209 ~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i 285 (289)
T cd00200 209 GKCLGTLRGHENGVNSVAFS---PDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTI 285 (289)
T ss_pred CceecchhhcCCceEEEEEc---CCCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeE
Confidence 45566666788899999999 678888888889999999998888888888888899999999999999999999999
Q ss_pred EEcC
Q psy6444 85 KALK 88 (88)
Q Consensus 85 ~~~~ 88 (88)
++|+
T Consensus 286 ~iw~ 289 (289)
T cd00200 286 RIWD 289 (289)
T ss_pred EecC
Confidence 9996
No 74
>KOG4283|consensus
Probab=99.41 E-value=2.8e-12 Score=71.63 Aligned_cols=84 Identities=24% Similarity=0.244 Sum_probs=68.6
Q ss_pred CccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCC-CEEEE--------------ecCCCCeEEEEE
Q psy6444 3 SIRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTG-DWIGT--------------FEGHKGCVWGVD 67 (88)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------------~~~~~~~i~~~~ 67 (88)
..|..-.+|.||+..|.++.|+| ...-.+++++.|+.+++||++.. .+... -..|.+.+..++
T Consensus 176 ~SGs~sH~LsGHr~~vlaV~Wsp--~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla 253 (397)
T KOG4283|consen 176 ASGSFSHTLSGHRDGVLAVEWSP--SSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLA 253 (397)
T ss_pred cCCcceeeeccccCceEEEEecc--CceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeee
Confidence 45566788999999999999996 55567889999999999998743 11111 235778999999
Q ss_pred ECCCCCeEEEecCCCeEEEcC
Q psy6444 68 INKDASKAASGAADFQAKALK 88 (88)
Q Consensus 68 ~~~~~~~~~~~~~d~~i~~~~ 88 (88)
|.-++.++++++.|..+++|+
T Consensus 254 ~tSd~~~l~~~gtd~r~r~wn 274 (397)
T KOG4283|consen 254 WTSDARYLASCGTDDRIRVWN 274 (397)
T ss_pred ecccchhhhhccCccceEEee
Confidence 999999999999999999996
No 75
>KOG0313|consensus
Probab=99.40 E-value=4.3e-12 Score=72.42 Aligned_cols=79 Identities=23% Similarity=0.271 Sum_probs=71.9
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC-EEEEecCCCCeEEEEEECCCCCeEEEecCCCeE
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD-WIGTFEGHKGCVWGVDINKDASKAASGAADFQA 84 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 84 (88)
.+.++|.+|++.|..+.|+| .+...|++++.|+.+++||++... .+..+.+|...|.++.|+. +..+++++.|.++
T Consensus 336 ~v~~s~~gH~nwVssvkwsp--~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~-~~~IvSGGaD~~l 412 (423)
T KOG0313|consen 336 VVSQSLIGHKNWVSSVKWSP--TNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNE-GGLIVSGGADNKL 412 (423)
T ss_pred eeEEeeecchhhhhheecCC--CCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccC-CceEEeccCcceE
Confidence 46788999999999999998 788899999999999999999877 8899999999999999985 6788999999999
Q ss_pred EEc
Q psy6444 85 KAL 87 (88)
Q Consensus 85 ~~~ 87 (88)
+++
T Consensus 413 ~i~ 415 (423)
T KOG0313|consen 413 RIF 415 (423)
T ss_pred EEe
Confidence 986
No 76
>KOG0301|consensus
Probab=99.40 E-value=4.6e-12 Score=76.59 Aligned_cols=80 Identities=24% Similarity=0.255 Sum_probs=72.6
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
.++.++++.+|+.-|+.+++- +...++|+++||.|++|++ .+..+..+.+|.+-+.++...+.+..++++++|++
T Consensus 168 ~~~~l~tf~gHtD~VRgL~vl----~~~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrt 242 (745)
T KOG0301|consen 168 GGTLLKTFSGHTDCVRGLAVL----DDSHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRT 242 (745)
T ss_pred CCchhhhhccchhheeeeEEe----cCCCeEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCce
Confidence 456788999999999999986 4668899999999999999 58889999999999999998888889999999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
+++|+
T Consensus 243 lriW~ 247 (745)
T KOG0301|consen 243 LRIWK 247 (745)
T ss_pred EEEee
Confidence 99995
No 77
>KOG0293|consensus
Probab=99.39 E-value=2.6e-12 Score=74.18 Aligned_cols=79 Identities=23% Similarity=0.114 Sum_probs=69.7
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC---EEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD---WIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
-.+++..|+..|..+.|+ ++|.+++++++|.+..+|.+.... ....+.+|...|..+.|+||.+++++++.+..
T Consensus 216 t~qil~~htdEVWfl~FS---~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~ 292 (519)
T KOG0293|consen 216 TWQILQDHTDEVWFLQFS---HNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEV 292 (519)
T ss_pred hhhhHhhCCCcEEEEEEc---CCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHh
Confidence 345678899999999999 899999999999999999765433 45778999999999999999999999998888
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
+.+||
T Consensus 293 ~~lwD 297 (519)
T KOG0293|consen 293 LSLWD 297 (519)
T ss_pred eeecc
Confidence 99997
No 78
>KOG0268|consensus
Probab=99.39 E-value=6.5e-13 Score=75.50 Aligned_cols=83 Identities=18% Similarity=0.198 Sum_probs=68.3
Q ss_pred CccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEe-cCCCCeEEEEEECCCCCeEEEecCC
Q psy6444 3 SIRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTF-EGHKGCVWGVDINKDASKAASGAAD 81 (88)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~d 81 (88)
....++....+|.++|.+++|+ |.|+-+++|+.|++|++|.+..+.....+ ...-..|.++.|+.|..++++++.|
T Consensus 260 ~l~~p~~v~~dhvsAV~dVdfs---ptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd 336 (433)
T KOG0268|consen 260 NLSRPLNVHKDHVSAVMDVDFS---PTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDD 336 (433)
T ss_pred hhcccchhhcccceeEEEeccC---CCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCC
Confidence 3456788889999999999999 79999999999999999998755421111 1123567899999999999999999
Q ss_pred CeEEEcC
Q psy6444 82 FQAKALK 88 (88)
Q Consensus 82 ~~i~~~~ 88 (88)
+.+|+|.
T Consensus 337 ~nvRlWk 343 (433)
T KOG0268|consen 337 GNVRLWK 343 (433)
T ss_pred cceeeee
Confidence 9999993
No 79
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.38 E-value=1.2e-11 Score=77.38 Aligned_cols=72 Identities=17% Similarity=0.228 Sum_probs=65.0
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECC-CCCeEEEecCCCeEEEcC
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINK-DASKAASGAADFQAKALK 88 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~~~~ 88 (88)
...+.++.|+| ..+..+++++.|+.+++||+.++..+..+.+|.+.|++++|+| ++.++++++.|+.+++||
T Consensus 532 ~~~v~~l~~~~--~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd 604 (793)
T PLN00181 532 RSKLSGICWNS--YIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWS 604 (793)
T ss_pred cCceeeEEecc--CCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEE
Confidence 46788899985 5678999999999999999998888889999999999999997 788999999999999997
No 80
>KOG0302|consensus
Probab=99.38 E-value=8.4e-12 Score=71.35 Aligned_cols=80 Identities=19% Similarity=0.236 Sum_probs=67.8
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCC---CCEEEEecCCCCeEEEEEECCC-CCeEEEecCC
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDT---GDWIGTFEGHKGCVWGVDINKD-ASKAASGAAD 81 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d 81 (88)
+.....+.|.+-|..++|+ ....+|++|+.+|.+.+||++. +..+..++.|+..|.++.|+|. ...++.++.|
T Consensus 293 ~~~~~~kAh~sDVNVISWn---r~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D 369 (440)
T KOG0302|consen 293 KAAVSTKAHNSDVNVISWN---RREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGED 369 (440)
T ss_pred cceeEeeccCCceeeEEcc---CCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCC
Confidence 4444557899999999999 5666999999999999999874 4577899999999999999995 4466788899
Q ss_pred CeEEEcC
Q psy6444 82 FQAKALK 88 (88)
Q Consensus 82 ~~i~~~~ 88 (88)
..+.+||
T Consensus 370 ~QitiWD 376 (440)
T KOG0302|consen 370 NQITIWD 376 (440)
T ss_pred CcEEEEE
Confidence 9999997
No 81
>KOG0274|consensus
Probab=99.37 E-value=1.5e-11 Score=74.08 Aligned_cols=79 Identities=24% Similarity=0.362 Sum_probs=71.7
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
+++.+..+.+|+++|.++..+ +..+++++.|+.|.+|++..++.+..+.+|..+|.++.+... ..+++++.|++
T Consensus 320 n~~~l~l~~~h~~~V~~v~~~-----~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~ 393 (537)
T KOG0274|consen 320 NGACLNLLRGHTGPVNCVQLD-----EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTT 393 (537)
T ss_pred CcceEEEeccccccEEEEEec-----CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccc
Confidence 577888888999999999874 889999999999999999999999999999999999977654 77889999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
|++||
T Consensus 394 IkvWd 398 (537)
T KOG0274|consen 394 IKVWD 398 (537)
T ss_pred eEeec
Confidence 99997
No 82
>KOG0283|consensus
Probab=99.37 E-value=8.2e-12 Score=76.26 Aligned_cols=79 Identities=19% Similarity=0.144 Sum_probs=66.5
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEE
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK 85 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 85 (88)
..+.++. |...|+|++|+| -+.+++++|+-|+.+++|++...+.+.... -...|++++|.|+|...+-|+.+|.++
T Consensus 401 ~CL~~F~-HndfVTcVaFnP--vDDryFiSGSLD~KvRiWsI~d~~Vv~W~D-l~~lITAvcy~PdGk~avIGt~~G~C~ 476 (712)
T KOG0283|consen 401 ECLKVFS-HNDFVTCVAFNP--VDDRYFISGSLDGKVRLWSISDKKVVDWND-LRDLITAVCYSPDGKGAVIGTFNGYCR 476 (712)
T ss_pred ceeeEEe-cCCeeEEEEecc--cCCCcEeecccccceEEeecCcCeeEeehh-hhhhheeEEeccCCceEEEEEeccEEE
Confidence 4455544 899999999998 788999999999999999998655444433 448899999999999999999999999
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
+|+
T Consensus 477 fY~ 479 (712)
T KOG0283|consen 477 FYD 479 (712)
T ss_pred EEE
Confidence 875
No 83
>KOG2394|consensus
Probab=99.36 E-value=1.7e-12 Score=76.79 Aligned_cols=78 Identities=19% Similarity=0.188 Sum_probs=68.7
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEE
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
++..+.-.++.+..++|+ ++|..|+..+.|+.+++|+..+...+..++...+...+++|+||+.+++++++|-.+.|
T Consensus 282 Pv~~w~~~~g~in~f~FS---~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtV 358 (636)
T KOG2394|consen 282 PVARWHIGEGSINEFAFS---PDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTV 358 (636)
T ss_pred ccceeEeccccccceeEc---CCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEE
Confidence 444444455678888999 79999999999999999999888877888888899999999999999999999999999
Q ss_pred c
Q psy6444 87 L 87 (88)
Q Consensus 87 ~ 87 (88)
|
T Consensus 359 w 359 (636)
T KOG2394|consen 359 W 359 (636)
T ss_pred E
Confidence 8
No 84
>KOG1332|consensus
Probab=99.35 E-value=1e-11 Score=67.77 Aligned_cols=80 Identities=24% Similarity=0.369 Sum_probs=67.9
Q ss_pred ceeEEecCCCCCEEEEEEE-ecCCCCcEEEEEeCCCCEEEEECCCCCE--EEEecCCCCeEEEEEECCCCC--eEEEecC
Q psy6444 6 QIPLTCSGHTRPVVHLAFS-DITESGYFLISACKDGKPMLRQGDTGDW--IGTFEGHKGCVWGVDINKDAS--KAASGAA 80 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~--~~~~~~~ 80 (88)
+++..|.||.++|..++|. | .-|..|++++.|+.+.+|.-.+++. ......|...+++++|.|+.. .+++++.
T Consensus 47 ~ll~~L~Gh~GPVwqv~wahP--k~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasS 124 (299)
T KOG1332|consen 47 KLLAELTGHSGPVWKVAWAHP--KFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASS 124 (299)
T ss_pred eeeeEecCCCCCeeEEeeccc--ccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeC
Confidence 6788999999999999996 3 4789999999999999999887753 344567889999999999744 6779999
Q ss_pred CCeEEEc
Q psy6444 81 DFQAKAL 87 (88)
Q Consensus 81 d~~i~~~ 87 (88)
||.|.++
T Consensus 125 DG~vsvl 131 (299)
T KOG1332|consen 125 DGKVSVL 131 (299)
T ss_pred CCcEEEE
Confidence 9999875
No 85
>KOG1539|consensus
Probab=99.34 E-value=1.1e-11 Score=76.35 Aligned_cols=80 Identities=20% Similarity=0.173 Sum_probs=69.6
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCC-C
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAAD-F 82 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-~ 82 (88)
..+.++.+.||+..+.+.+|+ ++|+|+++++.|++|++||+.++..+-.+.. ...+.++.|+|.+.++++...| .
T Consensus 565 t~kvvR~f~gh~nritd~~FS---~DgrWlisasmD~tIr~wDlpt~~lID~~~v-d~~~~sls~SPngD~LAT~Hvd~~ 640 (910)
T KOG1539|consen 565 TRKVVREFWGHGNRITDMTFS---PDGRWLISASMDSTIRTWDLPTGTLIDGLLV-DSPCTSLSFSPNGDFLATVHVDQN 640 (910)
T ss_pred hhhhhHHhhccccceeeeEeC---CCCcEEEEeecCCcEEEEeccCcceeeeEec-CCcceeeEECCCCCEEEEEEecCc
Confidence 345778899999999999999 8999999999999999999999988776653 4677889999999999998877 4
Q ss_pred eEEEc
Q psy6444 83 QAKAL 87 (88)
Q Consensus 83 ~i~~~ 87 (88)
-|.+|
T Consensus 641 gIylW 645 (910)
T KOG1539|consen 641 GIYLW 645 (910)
T ss_pred eEEEE
Confidence 57777
No 86
>KOG0973|consensus
Probab=99.34 E-value=1.5e-11 Score=76.85 Aligned_cols=81 Identities=23% Similarity=0.260 Sum_probs=70.6
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCC-------C-----------CEEEEecCCCCeEEEE
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDT-------G-----------DWIGTFEGHKGCVWGV 66 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-----------~~~~~~~~~~~~i~~~ 66 (88)
.+++.+...|.+.|.|++|+ ++|+.+++|++|+.+.+|.... + +....+.+|.+.|..+
T Consensus 59 ~k~l~~m~~h~~sv~CVR~S---~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv 135 (942)
T KOG0973|consen 59 PKHLCTMDDHDGSVNCVRFS---PDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDV 135 (942)
T ss_pred chhheeeccccCceeEEEEC---CCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCcccee
Confidence 45667788899999999999 8999999999999999997652 0 1345667899999999
Q ss_pred EECCCCCeEEEecCCCeEEEcC
Q psy6444 67 DINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 67 ~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
.|+|++.++++++-|+++-+||
T Consensus 136 ~Wsp~~~~lvS~s~DnsViiwn 157 (942)
T KOG0973|consen 136 NWSPDDSLLVSVSLDNSVIIWN 157 (942)
T ss_pred ccCCCccEEEEecccceEEEEc
Confidence 9999999999999999999997
No 87
>KOG0294|consensus
Probab=99.34 E-value=9.3e-12 Score=69.79 Aligned_cols=77 Identities=19% Similarity=0.233 Sum_probs=70.4
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCC--eEEEecCCCeE
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDAS--KAASGAADFQA 84 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~d~~i 84 (88)
++..+..|.+++.+++.+ +.++++++.|..|.+||.+....+..+..|.+.|+++.|.+... .+++++.||.|
T Consensus 35 ~lF~~~aH~~sitavAVs-----~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i 109 (362)
T KOG0294|consen 35 PLFAFSAHAGSITALAVS-----GPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHI 109 (362)
T ss_pred ccccccccccceeEEEec-----ceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcE
Confidence 477888999999999875 89999999999999999998888899999999999999999765 88999999999
Q ss_pred EEcC
Q psy6444 85 KALK 88 (88)
Q Consensus 85 ~~~~ 88 (88)
-+|+
T Consensus 110 ~iw~ 113 (362)
T KOG0294|consen 110 IIWR 113 (362)
T ss_pred EEEE
Confidence 9995
No 88
>KOG0267|consensus
Probab=99.34 E-value=2.9e-12 Score=77.90 Aligned_cols=81 Identities=22% Similarity=0.245 Sum_probs=75.0
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeE
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQA 84 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 84 (88)
.+.+++|.||...+..+.|+ |-+++.++++.|..+++||.+...++..+.+|.+.+..++|+|+|+++++++.|+++
T Consensus 102 Ak~vrtLtgh~~~~~sv~f~---P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tv 178 (825)
T KOG0267|consen 102 AKIVRTLTGHLLNITSVDFH---PYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTV 178 (825)
T ss_pred hhhhhhhhccccCcceeeec---cceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCccee
Confidence 45678999999999999999 689999999999999999998777789999999999999999999999999999999
Q ss_pred EEcC
Q psy6444 85 KALK 88 (88)
Q Consensus 85 ~~~~ 88 (88)
++||
T Consensus 179 ki~d 182 (825)
T KOG0267|consen 179 KIWD 182 (825)
T ss_pred eeec
Confidence 9997
No 89
>KOG0293|consensus
Probab=99.33 E-value=9.3e-12 Score=71.99 Aligned_cols=80 Identities=21% Similarity=0.225 Sum_probs=70.8
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecC-CCCeEEEEEECCCCCeEEEecCCCeE
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEG-HKGCVWGVDINKDASKAASGAADFQA 84 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~d~~i 84 (88)
+..+++.+|..+|..+.|+ |+.+.+++++.+..+.+||+.++.....+.. +...+.+.+|.||+..+++++.|+.+
T Consensus 260 kl~~tlvgh~~~V~yi~wS---PDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i 336 (519)
T KOG0293|consen 260 KLKKTLVGHSQPVSYIMWS---PDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTI 336 (519)
T ss_pred eeeeeeecccCceEEEEEC---CCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcE
Confidence 4578999999999999999 7999999999999999999999987666643 35677888999999999999999999
Q ss_pred EEcC
Q psy6444 85 KALK 88 (88)
Q Consensus 85 ~~~~ 88 (88)
..||
T Consensus 337 ~~wd 340 (519)
T KOG0293|consen 337 IMWD 340 (519)
T ss_pred EEec
Confidence 9986
No 90
>KOG0306|consensus
Probab=99.33 E-value=1.3e-11 Score=75.52 Aligned_cols=80 Identities=20% Similarity=0.243 Sum_probs=74.5
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEE
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK 85 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 85 (88)
+-..+|.||.-||.|++.+ +++..+++++.|+.+++|-++-|.+-..+-+|...|.++.|-|+...+.++++|+.++
T Consensus 541 KFflsLYGHkLPV~smDIS---~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvK 617 (888)
T KOG0306|consen 541 KFFLSLYGHKLPVLSMDIS---PDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVK 617 (888)
T ss_pred eeeeeecccccceeEEecc---CCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEE
Confidence 4456889999999999999 8999999999999999999988888788889999999999999999999999999999
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
.||
T Consensus 618 qWD 620 (888)
T KOG0306|consen 618 QWD 620 (888)
T ss_pred eec
Confidence 997
No 91
>KOG0305|consensus
Probab=99.33 E-value=3e-11 Score=71.63 Aligned_cols=82 Identities=23% Similarity=0.242 Sum_probs=68.5
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEe--CCCCEEEEECCCCCEEE----------------------------
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISAC--KDGKPMLRQGDTGDWIG---------------------------- 54 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---------------------------- 54 (88)
..++..+..|++.|-.++|+| .....|++|+ .|+.+++|+..++..+.
T Consensus 333 ~~p~~~~~~H~aAVKA~awcP--~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~ 410 (484)
T KOG0305|consen 333 PEPKFTFTEHTAAVKALAWCP--WQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSE 410 (484)
T ss_pred ccccEEEeccceeeeEeeeCC--CccCceEEcCCCcccEEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCC
Confidence 467788899999999999998 8888999854 57889999877553322
Q ss_pred ---------------EecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 55 ---------------TFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 55 ---------------~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
.+.+|..+|..++++|++..+++++.|.++++|+
T Consensus 411 n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~ 459 (484)
T KOG0305|consen 411 NQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWN 459 (484)
T ss_pred CcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEecc
Confidence 2247889999999999999999999999999996
No 92
>KOG0640|consensus
Probab=99.32 E-value=6.1e-12 Score=70.74 Aligned_cols=80 Identities=20% Similarity=0.187 Sum_probs=66.5
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCC------------CEEEEe-----------------
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTG------------DWIGTF----------------- 56 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~----------------- 56 (88)
..+++|..|...|.++.|+ |....|++++.|+.+++||+... ..++.+
T Consensus 163 PvIRTlYDH~devn~l~FH---Pre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~ 239 (430)
T KOG0640|consen 163 PVIRTLYDHVDEVNDLDFH---PRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPT 239 (430)
T ss_pred ceEeehhhccCcccceeec---chhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCc
Confidence 4688999999999999999 68889999999999999987531 011111
Q ss_pred ------------------cCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 57 ------------------EGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 57 ------------------~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
..|.+.|..+.+++.++.++++++||-|++||
T Consensus 240 ~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwD 289 (430)
T KOG0640|consen 240 LRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWD 289 (430)
T ss_pred eeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeec
Confidence 25678899999999999999999999999997
No 93
>KOG1446|consensus
Probab=99.32 E-value=5.9e-11 Score=66.29 Aligned_cols=80 Identities=14% Similarity=0.035 Sum_probs=67.1
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
+.+.++.+.||+..|..+..+ |-++.+++++.|+.+++||++..++...+......+ .+|.|.|-.+|.+.....
T Consensus 89 dNkylRYF~GH~~~V~sL~~s---P~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi--~AfDp~GLifA~~~~~~~ 163 (311)
T KOG1446|consen 89 DNKYLRYFPGHKKRVNSLSVS---PKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPI--AAFDPEGLIFALANGSEL 163 (311)
T ss_pred cCceEEEcCCCCceEEEEEec---CCCCeEEecccCCeEEeeEecCCCCceEEecCCCcc--eeECCCCcEEEEecCCCe
Confidence 568899999999999999999 567999999999999999998766655555443333 578999999998888778
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
|+++|
T Consensus 164 IkLyD 168 (311)
T KOG1446|consen 164 IKLYD 168 (311)
T ss_pred EEEEE
Confidence 98886
No 94
>KOG0275|consensus
Probab=99.32 E-value=9.9e-13 Score=74.35 Aligned_cols=71 Identities=24% Similarity=0.340 Sum_probs=66.3
Q ss_pred CCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEec-CCCCeEEEEEECCCCCeEEEecCCCeEEEc
Q psy6444 14 HTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFE-GHKGCVWGVDINKDASKAASGAADFQAKAL 87 (88)
Q Consensus 14 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 87 (88)
+..+|.|+.|+ .+.+.+++|+.||.|++|.+.++.+++.+. .|...|.++.|+.|+.++++++.|.++|+.
T Consensus 262 md~aVlci~FS---RDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiH 333 (508)
T KOG0275|consen 262 MDDAVLCISFS---RDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIH 333 (508)
T ss_pred cccceEEEeec---ccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEe
Confidence 56789999999 899999999999999999999999998887 699999999999999999999999999875
No 95
>KOG0305|consensus
Probab=99.31 E-value=6.8e-12 Score=74.28 Aligned_cols=76 Identities=26% Similarity=0.226 Sum_probs=67.5
Q ss_pred EecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCC-CCeEEEe--cCCCeEEE
Q psy6444 10 TCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKD-ASKAASG--AADFQAKA 86 (88)
Q Consensus 10 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~--~~d~~i~~ 86 (88)
++.+|+..|-.+.|+ +++..+++++.|..+.+||.........+..|..+|.+++|+|- ...+|++ +.|+.|++
T Consensus 296 ~~~~H~qeVCgLkws---~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~f 372 (484)
T KOG0305|consen 296 TLQGHRQEVCGLKWS---PDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKF 372 (484)
T ss_pred hhhcccceeeeeEEC---CCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEE
Confidence 478899999999999 89999999999999999999777788899999999999999994 4566764 48899999
Q ss_pred cC
Q psy6444 87 LK 88 (88)
Q Consensus 87 ~~ 88 (88)
||
T Consensus 373 wn 374 (484)
T KOG0305|consen 373 WN 374 (484)
T ss_pred EE
Confidence 97
No 96
>KOG1310|consensus
Probab=99.31 E-value=1.7e-11 Score=73.21 Aligned_cols=77 Identities=22% Similarity=0.267 Sum_probs=68.1
Q ss_pred EEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEe-cCCCCeEEEEEECCC--CCeEEEecCCCeEE
Q psy6444 9 LTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTF-EGHKGCVWGVDINKD--ASKAASGAADFQAK 85 (88)
Q Consensus 9 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~--~~~~~~~~~d~~i~ 85 (88)
..|+||++-|.++.|+ .+|.+|++|+.|..+.+||.-..+.+..+ .+|..-|.++.|-|. .++++++..|..|+
T Consensus 44 ~eL~GH~GCVN~LeWn---~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~ 120 (758)
T KOG1310|consen 44 AELTGHTGCVNCLEWN---ADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIK 120 (758)
T ss_pred hhhccccceecceeec---CCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEE
Confidence 4578999999999999 99999999999999999999877776665 579999999999884 55788999999999
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
++|
T Consensus 121 lfd 123 (758)
T KOG1310|consen 121 LFD 123 (758)
T ss_pred EEe
Confidence 986
No 97
>KOG0303|consensus
Probab=99.30 E-value=5.2e-12 Score=72.59 Aligned_cols=77 Identities=21% Similarity=0.219 Sum_probs=67.4
Q ss_pred EecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCC-------CEEEEecCCCCeEEEEEECCC-CCeEEEecCC
Q psy6444 10 TCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTG-------DWIGTFEGHKGCVWGVDINKD-ASKAASGAAD 81 (88)
Q Consensus 10 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d 81 (88)
.+.||+++|..++|+| .+-+.+++|+.|..+.+|++..+ ..+..+.+|..+|-.+.|+|. .+.+++++.|
T Consensus 76 ~v~GHt~~vLDi~w~P--fnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~D 153 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCP--FNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSD 153 (472)
T ss_pred CccCccccccccccCc--cCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCC
Confidence 3568999999999998 88999999999999999998753 346778899999999999996 4467799999
Q ss_pred CeEEEcC
Q psy6444 82 FQAKALK 88 (88)
Q Consensus 82 ~~i~~~~ 88 (88)
..+.+||
T Consensus 154 n~v~iWn 160 (472)
T KOG0303|consen 154 NTVSIWN 160 (472)
T ss_pred ceEEEEe
Confidence 9999997
No 98
>KOG0274|consensus
Probab=99.30 E-value=1e-10 Score=70.67 Aligned_cols=80 Identities=28% Similarity=0.315 Sum_probs=69.1
Q ss_pred ccceeEE-ecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCC
Q psy6444 4 IRQIPLT-CSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADF 82 (88)
Q Consensus 4 ~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~ 82 (88)
++..+.+ +.||.+.|..+.+. ..+..+++|+.|.++++||..++.+...+.+|...+.++... ...+.+++.|.
T Consensus 237 ~~~~i~~~l~GH~g~V~~l~~~---~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~--~~~~~sgs~D~ 311 (537)
T KOG0274|consen 237 NGYLILTRLVGHFGGVWGLAFP---SGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTID--PFLLVSGSRDN 311 (537)
T ss_pred cceEEEeeccCCCCCceeEEEe---cCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEcc--CceEeeccCCc
Confidence 4455666 99999999999997 668999999999999999999999999999999999888654 44666788999
Q ss_pred eEEEcC
Q psy6444 83 QAKALK 88 (88)
Q Consensus 83 ~i~~~~ 88 (88)
++++|+
T Consensus 312 tVkVW~ 317 (537)
T KOG0274|consen 312 TVKVWD 317 (537)
T ss_pred eEEEEe
Confidence 999996
No 99
>KOG0296|consensus
Probab=99.30 E-value=8.4e-11 Score=67.00 Aligned_cols=72 Identities=14% Similarity=0.149 Sum_probs=65.7
Q ss_pred CCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 14 HTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 14 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
.-..+..+.|+ +.+..++.|+.||.+.+|.+.+......+.+|...+.+-.|.|+|..++++..|++|++||
T Consensus 147 e~~dieWl~WH---p~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn 218 (399)
T KOG0296|consen 147 EVEDIEWLKWH---PRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWN 218 (399)
T ss_pred ccCceEEEEec---ccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEe
Confidence 34557778899 6899999999999999999998788899999999999999999999999999999999997
No 100
>KOG1539|consensus
Probab=99.30 E-value=6.3e-11 Score=73.12 Aligned_cols=81 Identities=19% Similarity=0.141 Sum_probs=66.2
Q ss_pred cceeEEe---cCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEE----------------------------
Q psy6444 5 RQIPLTC---SGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWI---------------------------- 53 (88)
Q Consensus 5 ~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------- 53 (88)
|....++ ..|.++|..++.. ...+.+++++.+|.+.+|+......+
T Consensus 480 Gi~r~sf~~~~ah~~~V~gla~D---~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf 556 (910)
T KOG1539|consen 480 GIHRKSFGDSPAHKGEVTGLAVD---GTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDF 556 (910)
T ss_pred CeeecccccCccccCceeEEEec---CCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCce
Confidence 3344455 4688999999988 67789999999999999987644311
Q ss_pred -------------EEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 54 -------------GTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 54 -------------~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
+.+.+|.++|+.++|||+|+++++++.|++||+||
T Consensus 557 ~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wD 604 (910)
T KOG1539|consen 557 SIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWD 604 (910)
T ss_pred eEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEe
Confidence 12247999999999999999999999999999998
No 101
>KOG0306|consensus
Probab=99.28 E-value=2.1e-11 Score=74.59 Aligned_cols=80 Identities=20% Similarity=0.314 Sum_probs=72.8
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEE
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK 85 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 85 (88)
.+-+++-+|...|.++.|. |....++++++|+.++-||-.+-..++.+.+|...|++++.+|+|.+++++++|.+||
T Consensus 583 DCHKS~fAHdDSvm~V~F~---P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIR 659 (888)
T KOG0306|consen 583 DCHKSFFAHDDSVMSVQFL---PKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIR 659 (888)
T ss_pred hhhhhhhcccCceeEEEEc---ccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeE
Confidence 3445566788999999999 6888999999999999999988888999999999999999999999999999999999
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
+|.
T Consensus 660 lwE 662 (888)
T KOG0306|consen 660 LWE 662 (888)
T ss_pred eee
Confidence 994
No 102
>KOG0318|consensus
Probab=99.28 E-value=8.2e-11 Score=69.71 Aligned_cols=78 Identities=15% Similarity=0.171 Sum_probs=68.0
Q ss_pred eEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCE-EEEecCCCCeEEEEEECCCCCeEEEecCCCeEEE
Q psy6444 8 PLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDW-IGTFEGHKGCVWGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
...+..|++++.+++|+ +++.+|+++...+.+.+|++.+.+. ...+..|..+|.+++|+|+...+++++-|..+.+
T Consensus 480 e~~~~~h~a~iT~vayS---pd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Vii 556 (603)
T KOG0318|consen 480 EAKLLEHRAAITDVAYS---PDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVII 556 (603)
T ss_pred eeeeecccCCceEEEEC---CCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEE
Confidence 33566799999999999 8999999999999999999987664 2344559999999999999999999999999999
Q ss_pred cC
Q psy6444 87 LK 88 (88)
Q Consensus 87 ~~ 88 (88)
|+
T Consensus 557 ys 558 (603)
T KOG0318|consen 557 YS 558 (603)
T ss_pred EE
Confidence 84
No 103
>KOG0300|consensus
Probab=99.27 E-value=2.2e-11 Score=68.87 Aligned_cols=81 Identities=16% Similarity=0.205 Sum_probs=75.6
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeE
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQA 84 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 84 (88)
..|+..|++|.+.|.+..|- ..|+.+++++.|..-.+||+.++..+..+.+|.....+.+-+|..+++++++.|.+.
T Consensus 262 RvPl~~ltgH~~vV~a~dWL---~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTF 338 (481)
T KOG0300|consen 262 RVPLMRLTGHRAVVSACDWL---AGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTF 338 (481)
T ss_pred eeeeeeeeccccceEehhhh---cCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCcee
Confidence 35778899999999999998 788999999999999999999999999999999999998889999999999999999
Q ss_pred EEcC
Q psy6444 85 KALK 88 (88)
Q Consensus 85 ~~~~ 88 (88)
|+||
T Consensus 339 RLWD 342 (481)
T KOG0300|consen 339 RLWD 342 (481)
T ss_pred Eecc
Confidence 9997
No 104
>KOG0639|consensus
Probab=99.27 E-value=1.3e-11 Score=73.04 Aligned_cols=68 Identities=25% Similarity=0.365 Sum_probs=63.4
Q ss_pred EEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 18 VVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 18 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
...++.+ ++.+..+++..||.|.+||+.+...++.+++|...+.++.++++|..+++++-|.++|.||
T Consensus 512 CyALa~s---pDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWD 579 (705)
T KOG0639|consen 512 CYALAIS---PDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWD 579 (705)
T ss_pred hhhhhcC---CccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehh
Confidence 4456667 7999999999999999999999999999999999999999999999999999999999997
No 105
>KOG0646|consensus
Probab=99.27 E-value=1.5e-11 Score=71.52 Aligned_cols=71 Identities=24% Similarity=0.327 Sum_probs=66.4
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
.++|.++.-+ ++|.+++.+.-.+.+.+|.+.+|..+..+..|...|+++.|+-|+.++++++.||.+.+|+
T Consensus 81 Pg~v~al~s~---n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~ 151 (476)
T KOG0646|consen 81 PGPVHALASS---NLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWL 151 (476)
T ss_pred ccceeeeecC---CCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEE
Confidence 4678899888 7999999998999999999999999999999999999999999999999999999999994
No 106
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.24 E-value=1.1e-10 Score=47.13 Aligned_cols=39 Identities=28% Similarity=0.423 Sum_probs=36.4
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEE
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQ 46 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 46 (88)
++++.++++|.+.|.+++|+ +++..+++++.|+.+++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~---~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWS---PDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEE---TTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEe---cccccceeeCCCCEEEEEC
Confidence 46788999999999999999 7899999999999999996
No 107
>KOG1274|consensus
Probab=99.24 E-value=1.3e-10 Score=72.17 Aligned_cols=82 Identities=20% Similarity=0.193 Sum_probs=61.9
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEec--------------------------
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFE-------------------------- 57 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------- 57 (88)
+....+++++|.++|.++.|+ ++++++++...||.+.+|+++++.....+.
T Consensus 127 D~s~~~~lrgh~apVl~l~~~---p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~l 203 (933)
T KOG1274|consen 127 DSSQEKVLRGHDAPVLQLSYD---PKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTL 203 (933)
T ss_pred ccchheeecccCCceeeeeEc---CCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeE
Confidence 344567899999999999999 799999999999999999987543221110
Q ss_pred --------------------------CCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 58 --------------------------GHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 58 --------------------------~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
.+...+..+.|+|.|.+++++..|+.|.|||
T Consensus 204 a~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWn 260 (933)
T KOG1274|consen 204 AVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWN 260 (933)
T ss_pred EeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEe
Confidence 1112256677888888888888888888886
No 108
>KOG0772|consensus
Probab=99.22 E-value=3.6e-11 Score=71.20 Aligned_cols=71 Identities=17% Similarity=0.228 Sum_probs=59.1
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC---EEEEecCCCC--eEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD---WIGTFEGHKG--CVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
+-++..+.|+ ++|.+++.++.||+|.+|+..+-. ....-..|.. .|.++.|+++|+++++.+.|.++++||
T Consensus 317 Rv~~tsC~~n---rdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWD 392 (641)
T KOG0772|consen 317 RVPVTSCAWN---RDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWD 392 (641)
T ss_pred ccCceeeecC---CCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeee
Confidence 4567888999 799999999999999999975322 2223345765 899999999999999999999999997
No 109
>KOG2111|consensus
Probab=99.22 E-value=7.3e-10 Score=62.37 Aligned_cols=76 Identities=11% Similarity=0.194 Sum_probs=67.0
Q ss_pred EEecCCCCCEEEEEEEecCCCCcEEEEEeCCCC-EEEEECCCCCEEEEecC--CCCeEEEEEECCCCCeEEEecCCCeEE
Q psy6444 9 LTCSGHTRPVVHLAFSDITESGYFLISACKDGK-PMLRQGDTGDWIGTFEG--HKGCVWGVDINKDASKAASGAADFQAK 85 (88)
Q Consensus 9 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~d~~i~ 85 (88)
.....|.+.+.|++++ -+|..+++++..|+ |++||..++..+..+.. ....|.+++|+|+..+++.++..|++-
T Consensus 175 ~~I~AH~s~Iacv~Ln---~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlH 251 (346)
T KOG2111|consen 175 SIINAHDSDIACVALN---LQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLH 251 (346)
T ss_pred eEEEcccCceeEEEEc---CCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEE
Confidence 5678899999999999 89999999999987 77999999998877753 456789999999999999999999987
Q ss_pred Ec
Q psy6444 86 AL 87 (88)
Q Consensus 86 ~~ 87 (88)
++
T Consensus 252 iF 253 (346)
T KOG2111|consen 252 IF 253 (346)
T ss_pred EE
Confidence 75
No 110
>KOG1446|consensus
Probab=99.22 E-value=6.3e-10 Score=62.29 Aligned_cols=83 Identities=14% Similarity=0.115 Sum_probs=68.4
Q ss_pred CccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeC--CCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecC
Q psy6444 3 SIRQIPLTCSGHTRPVVHLAFSDITESGYFLISACK--DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAA 80 (88)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 80 (88)
.+++.++++..++-.+..+.|- .....++.++. |..|+..++.+.+.++.+.||...|..++.+|.+..+++++.
T Consensus 44 ~~g~~~~ti~skkyG~~~~~Ft---h~~~~~i~sStk~d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~ 120 (311)
T KOG1446|consen 44 LSGKQVKTINSKKYGVDLACFT---HHSNTVIHSSTKEDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSL 120 (311)
T ss_pred CCCceeeEeecccccccEEEEe---cCCceEEEccCCCCCceEEEEeecCceEEEcCCCCceEEEEEecCCCCeEEeccc
Confidence 4567777777766666777776 44444444444 778999999999999999999999999999999999999999
Q ss_pred CCeEEEcC
Q psy6444 81 DFQAKALK 88 (88)
Q Consensus 81 d~~i~~~~ 88 (88)
|.++|+||
T Consensus 121 D~tvrLWD 128 (311)
T KOG1446|consen 121 DKTVRLWD 128 (311)
T ss_pred CCeEEeeE
Confidence 99999997
No 111
>KOG0267|consensus
Probab=99.22 E-value=2.5e-11 Score=73.99 Aligned_cols=80 Identities=23% Similarity=0.265 Sum_probs=74.4
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEE
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK 85 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 85 (88)
.+..++.+|...|..++|+ |+|.++++++.|..+++||..-++.+..|.+|...+..+.|+|...++++++.|.+++
T Consensus 145 Gc~~~~~s~~~vv~~l~ls---P~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~ 221 (825)
T KOG0267|consen 145 GCSHTYKSHTRVVDVLRLS---PDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVR 221 (825)
T ss_pred CceeeecCCcceeEEEeec---CCCceeeccCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCceee
Confidence 4677888899999999999 7999999999999999999998999999999999999999999988999999999999
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
+||
T Consensus 222 f~d 224 (825)
T KOG0267|consen 222 FWD 224 (825)
T ss_pred eec
Confidence 997
No 112
>KOG0299|consensus
Probab=99.22 E-value=1e-10 Score=68.12 Aligned_cols=74 Identities=28% Similarity=0.457 Sum_probs=69.5
Q ss_pred cCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 12 SGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 12 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
++|...+.+++.+ ++|.++++++.|..+.+|+.++...+..+.+|.+.|.+++|......+.+++.|.++++|+
T Consensus 199 ~~h~keil~~avS---~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~ 272 (479)
T KOG0299|consen 199 KGHVKEILTLAVS---SDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWS 272 (479)
T ss_pred ccccceeEEEEEc---CCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEe
Confidence 3788889999999 8999999999999999999999999999999999999999998888899999999999995
No 113
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.22 E-value=5.7e-11 Score=47.98 Aligned_cols=38 Identities=24% Similarity=0.371 Sum_probs=35.3
Q ss_pred CEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 51 DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 51 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
+.+..+.+|.+.|.+++|+|++.++++++.|+.+++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 35678899999999999999999999999999999997
No 114
>KOG0640|consensus
Probab=99.21 E-value=5.6e-11 Score=66.97 Aligned_cols=74 Identities=23% Similarity=0.323 Sum_probs=65.4
Q ss_pred cCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecC-CC-CeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 12 SGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEG-HK-GCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 12 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
..|++.|.++.++ +.+...+++++||.|++||--+++++..+.. |. ..|.+..|..++.++++.+.|..+++|.
T Consensus 258 ~qht~ai~~V~Ys---~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWE 333 (430)
T KOG0640|consen 258 DQHTGAITQVRYS---STGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWE 333 (430)
T ss_pred cccccceeEEEec---CCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeee
Confidence 3588999999999 8999999999999999999877888777754 43 5788889999999999999999999994
No 115
>KOG0270|consensus
Probab=99.21 E-value=2.3e-11 Score=70.51 Aligned_cols=76 Identities=25% Similarity=0.202 Sum_probs=66.2
Q ss_pred ecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCC-CCeEEEecCCCeEEEcC
Q psy6444 11 CSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKD-ASKAASGAADFQAKALK 88 (88)
Q Consensus 11 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~ 88 (88)
-.+|+..|..+.|+. .....|+|++.|+++.+||+.++++-..+..|.+.|.++.|+|. ...+++++.|+++.+.|
T Consensus 239 ~~gHTdavl~Ls~n~--~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D 315 (463)
T KOG0270|consen 239 ASGHTDAVLALSWNR--NFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKD 315 (463)
T ss_pred cccchHHHHHHHhcc--ccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeee
Confidence 346899999999984 44578999999999999999999998888889999999999985 66778999999998865
No 116
>KOG4283|consensus
Probab=99.21 E-value=2.3e-10 Score=64.18 Aligned_cols=73 Identities=21% Similarity=0.249 Sum_probs=63.2
Q ss_pred CCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEE-EecCCCeEEEcC
Q psy6444 16 RPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAA-SGAADFQAKALK 88 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d~~i~~~~ 88 (88)
+.|..-+++|+.....+++.+..+..|+++|+.+|...+.+.+|...|.++.|+|...+++ +++.|+.+|+||
T Consensus 144 ~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWD 217 (397)
T KOG4283|consen 144 GKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWD 217 (397)
T ss_pred ceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEE
Confidence 4566667776545567888888899999999999999999999999999999999988764 899999999997
No 117
>KOG0308|consensus
Probab=99.20 E-value=4.5e-10 Score=68.03 Aligned_cols=80 Identities=25% Similarity=0.279 Sum_probs=72.5
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
..+.+..++||+..|.++..+ .+|..+++++.|+.|++|++...+++..+..|...++++..++.-..+.+++.|+.
T Consensus 202 t~~kimkLrGHTdNVr~ll~~---dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~ 278 (735)
T KOG0308|consen 202 TCKKIMKLRGHTDNVRVLLVN---DDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGN 278 (735)
T ss_pred cccceeeeeccccceEEEEEc---CCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCc
Confidence 445677788999999999999 89999999999999999999988899999999999999999999889999999987
Q ss_pred EEE
Q psy6444 84 AKA 86 (88)
Q Consensus 84 i~~ 86 (88)
|..
T Consensus 279 i~~ 281 (735)
T KOG0308|consen 279 IYR 281 (735)
T ss_pred EEe
Confidence 753
No 118
>KOG2110|consensus
Probab=99.20 E-value=1.3e-09 Score=62.39 Aligned_cols=80 Identities=20% Similarity=0.240 Sum_probs=68.5
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCC-EEEEECCCCCEEEEecCC--CCeEEEEEECCCCCeEEEecCC
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGK-PMLRQGDTGDWIGTFEGH--KGCVWGVDINKDASKAASGAAD 81 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~d 81 (88)
-+++..+..|.+++.+++|+ ++|..+++++..|+ |++|.+.++..+..|... .-.|..++|++++.++.+.+..
T Consensus 163 l~~v~~I~aH~~~lAalafs---~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~T 239 (391)
T KOG2110|consen 163 LQPVNTINAHKGPLAALAFS---PDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNT 239 (391)
T ss_pred ceeeeEEEecCCceeEEEEC---CCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCC
Confidence 35677888999999999999 89999999999987 679999999988887543 3466899999999999888888
Q ss_pred CeEEEc
Q psy6444 82 FQAKAL 87 (88)
Q Consensus 82 ~~i~~~ 87 (88)
++|-+|
T Consensus 240 eTVHiF 245 (391)
T KOG2110|consen 240 ETVHIF 245 (391)
T ss_pred CeEEEE
Confidence 888775
No 119
>KOG0646|consensus
Probab=99.19 E-value=1.8e-10 Score=67.19 Aligned_cols=83 Identities=19% Similarity=0.239 Sum_probs=70.0
Q ss_pred CccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECC---------CCCEEEEecCCCCeEEEEEECCC--
Q psy6444 3 SIRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGD---------TGDWIGTFEGHKGCVWGVDINKD-- 71 (88)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~i~~~~~~~~-- 71 (88)
+.|..+..+.+|-..|.|+.|+ .++..++++++|+.|.+|++. +...++.+..|.-.|..+...+.
T Consensus 111 ssG~LL~v~~aHYQ~ITcL~fs---~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~ 187 (476)
T KOG0646|consen 111 SSGILLNVLSAHYQSITCLKFS---DDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGT 187 (476)
T ss_pred ccccHHHHHHhhccceeEEEEe---CCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCc
Confidence 4667777888899999999999 899999999999999999653 23467888999999988776553
Q ss_pred CCeEEEecCCCeEEEcC
Q psy6444 72 ASKAASGAADFQAKALK 88 (88)
Q Consensus 72 ~~~~~~~~~d~~i~~~~ 88 (88)
...+++++.|.++++||
T Consensus 188 ~~rl~TaS~D~t~k~wd 204 (476)
T KOG0646|consen 188 NARLYTASEDRTIKLWD 204 (476)
T ss_pred cceEEEecCCceEEEEE
Confidence 44788999999999997
No 120
>KOG2096|consensus
Probab=99.19 E-value=1.4e-10 Score=65.56 Aligned_cols=81 Identities=12% Similarity=0.119 Sum_probs=64.9
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECC---C-----CCEEEEecCCCCeEEEEEECCCCCeEE
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGD---T-----GDWIGTFEGHKGCVWGVDINKDASKAA 76 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~~~~i~~~~~~~~~~~~~ 76 (88)
|+.+.+...........+.+ |+|+++++++....+++|.+. . -..+..+++|...|...+|+++...++
T Consensus 218 Gq~L~~idtnq~~n~~aavS---P~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~v 294 (420)
T KOG2096|consen 218 GQLLQSIDTNQSSNYDAAVS---PDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAV 294 (420)
T ss_pred CceeeeeccccccccceeeC---CCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeE
Confidence 34444444444455566778 899999999998999999753 1 235678899999999999999999999
Q ss_pred EecCCCeEEEcC
Q psy6444 77 SGAADFQAKALK 88 (88)
Q Consensus 77 ~~~~d~~i~~~~ 88 (88)
+.+.||+.|+||
T Consensus 295 tvSkDG~wriwd 306 (420)
T KOG2096|consen 295 TVSKDGKWRIWD 306 (420)
T ss_pred EEecCCcEEEee
Confidence 999999999997
No 121
>KOG1009|consensus
Probab=99.19 E-value=2.1e-10 Score=66.13 Aligned_cols=79 Identities=24% Similarity=0.314 Sum_probs=66.9
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECC--------C------CC--EEEEecCCCCeEEEEEECC
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGD--------T------GD--WIGTFEGHKGCVWGVDINK 70 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~------~~--~~~~~~~~~~~i~~~~~~~ 70 (88)
.+..|..|+..|..++|+ ++|+.+++++.++.+.+|... . .. ....+.+|...+..++|++
T Consensus 57 y~s~Ls~H~~aVN~vRf~---p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~ 133 (434)
T KOG1009|consen 57 YLSSLSRHTRAVNVVRFS---PDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSP 133 (434)
T ss_pred EeecccCCcceeEEEEEc---CCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccC
Confidence 456778899999999999 899999999999999999654 1 11 1234567889999999999
Q ss_pred CCCeEEEecCCCeEEEcC
Q psy6444 71 DASKAASGAADFQAKALK 88 (88)
Q Consensus 71 ~~~~~~~~~~d~~i~~~~ 88 (88)
++..+++++.|.++++||
T Consensus 134 d~~~l~s~s~dns~~l~D 151 (434)
T KOG1009|consen 134 DSNFLVSGSVDNSVRLWD 151 (434)
T ss_pred CCceeeeeeccceEEEEE
Confidence 999999999999999997
No 122
>KOG1063|consensus
Probab=99.18 E-value=1.7e-10 Score=70.17 Aligned_cols=79 Identities=23% Similarity=0.330 Sum_probs=68.4
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC----EEEEecCCCCeEEEEEECCCCCeEEEecCC
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD----WIGTFEGHKGCVWGVDINKDASKAASGAAD 81 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d 81 (88)
+.+..+.+|.-.|..++|+ +++.+|++.+.|....+|...... .....+.|.+-|+..+|+|+..++++++.|
T Consensus 563 ~~~~~L~~HsLTVT~l~FS---pdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRD 639 (764)
T KOG1063|consen 563 LQVQELEGHSLTVTRLAFS---PDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRD 639 (764)
T ss_pred hhhheecccceEEEEEEEC---CCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCC
Confidence 4556789999999999999 899999999999999999875432 223356799999999999999999999999
Q ss_pred CeEEEc
Q psy6444 82 FQAKAL 87 (88)
Q Consensus 82 ~~i~~~ 87 (88)
.++.+|
T Consensus 640 K~VkVW 645 (764)
T KOG1063|consen 640 KKVKVW 645 (764)
T ss_pred ceEEEE
Confidence 999999
No 123
>KOG0269|consensus
Probab=99.18 E-value=6.6e-11 Score=72.52 Aligned_cols=82 Identities=18% Similarity=0.165 Sum_probs=71.3
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCC-CCeEEEecCCCe
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKD-ASKAASGAADFQ 83 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~ 83 (88)
.+.+..+..|...+.+++|++ .....+++|+.|+.|++||++.......+.+....|+.+.|+|. +..++++...|.
T Consensus 123 nk~l~~f~EH~Rs~~~ldfh~--tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~ 200 (839)
T KOG0269|consen 123 NKLLTVFNEHERSANKLDFHS--TEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGY 200 (839)
T ss_pred chhhhHhhhhccceeeeeecc--CCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCce
Confidence 345567888999999999996 66789999999999999999988877888888889999999995 667788888899
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
+++||
T Consensus 201 lqlWD 205 (839)
T KOG0269|consen 201 LQLWD 205 (839)
T ss_pred EEEee
Confidence 99997
No 124
>KOG1007|consensus
Probab=99.17 E-value=1.8e-10 Score=64.37 Aligned_cols=74 Identities=22% Similarity=0.335 Sum_probs=61.3
Q ss_pred CCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC-EEEEecCCCCeEEEEEECCCCCe-EEEecCCCeEEEcC
Q psy6444 13 GHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD-WIGTFEGHKGCVWGVDINKDASK-AASGAADFQAKALK 88 (88)
Q Consensus 13 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~d~~i~~~~ 88 (88)
.|...|..++|+| .....+++++.|+.+++||.++.+ .+..+.+|.-.+++++|+|...+ +++++.|..+.+|.
T Consensus 212 AHgq~vrdlDfNp--nkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsc 287 (370)
T KOG1007|consen 212 AHGQRVRDLDFNP--NKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSC 287 (370)
T ss_pred hhcceeeeccCCC--CceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEe
Confidence 4667799999995 445678899999999999998654 77889999999999999997654 55899999988763
No 125
>KOG0647|consensus
Probab=99.17 E-value=1.5e-10 Score=64.72 Aligned_cols=72 Identities=28% Similarity=0.334 Sum_probs=60.6
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCC-CEE-EEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTG-DWI-GTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
...|.+++|+| .....++.++.|+.|++|+++.. ..+ .....+.+.+..++|+.+|..+++++.|+.+++||
T Consensus 27 ~DsIS~l~FSP--~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wD 100 (347)
T KOG0647|consen 27 EDSISALAFSP--QADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWD 100 (347)
T ss_pred ccchheeEecc--ccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEE
Confidence 45689999995 46677779999999999999863 322 44566889999999999999999999999999997
No 126
>KOG0322|consensus
Probab=99.17 E-value=8.2e-11 Score=64.89 Aligned_cols=69 Identities=19% Similarity=0.123 Sum_probs=63.6
Q ss_pred CEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 17 PVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 17 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
.+..++.- ++++.+++++.|+.+++|.-++...+..++.|...|.+++|+|+...++.+++|.+|-+|+
T Consensus 253 Gv~gvrIR---pD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWk 321 (323)
T KOG0322|consen 253 GVSGVRIR---PDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWK 321 (323)
T ss_pred CccceEEc---cCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeee
Confidence 35567777 7999999999999999999999999999999999999999999999999999999999995
No 127
>KOG0310|consensus
Probab=99.15 E-value=1.1e-09 Score=64.29 Aligned_cols=77 Identities=22% Similarity=0.113 Sum_probs=63.9
Q ss_pred eEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCC-CEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEE
Q psy6444 8 PLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTG-DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
...+.+|+..|.+.+++| .+.-.+++|+.||.|++||.+.. ..+..+. |.-.|-.+.+-|.|.++++++ ...+++
T Consensus 146 ~~~l~~htDYVR~g~~~~--~~~hivvtGsYDg~vrl~DtR~~~~~v~eln-hg~pVe~vl~lpsgs~iasAg-Gn~vkV 221 (487)
T KOG0310|consen 146 QAELSGHTDYVRCGDISP--ANDHIVVTGSYDGKVRLWDTRSLTSRVVELN-HGCPVESVLALPSGSLIASAG-GNSVKV 221 (487)
T ss_pred EEEecCCcceeEeecccc--CCCeEEEecCCCceEEEEEeccCCceeEEec-CCCceeeEEEcCCCCEEEEcC-CCeEEE
Confidence 447889999999999997 66778999999999999999866 4445554 778888999999989888765 467999
Q ss_pred cC
Q psy6444 87 LK 88 (88)
Q Consensus 87 ~~ 88 (88)
||
T Consensus 222 WD 223 (487)
T KOG0310|consen 222 WD 223 (487)
T ss_pred EE
Confidence 97
No 128
>KOG0650|consensus
Probab=99.15 E-value=1.5e-09 Score=65.53 Aligned_cols=64 Identities=25% Similarity=0.310 Sum_probs=56.6
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCC
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDAS 73 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 73 (88)
.....+.||++.|.+++.. +.|+++++|+.||++++|.+.+++++..+. ..+.|.+++|+|.+.
T Consensus 391 ~~~lvyrGHtg~Vr~iSvd---p~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~ 454 (733)
T KOG0650|consen 391 RCALVYRGHTGLVRSISVD---PSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSD 454 (733)
T ss_pred eeeeeEeccCCeEEEEEec---CCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCC
Confidence 3456788999999999999 799999999999999999999999988877 346899999999765
No 129
>KOG0772|consensus
Probab=99.14 E-value=1.5e-10 Score=68.65 Aligned_cols=77 Identities=14% Similarity=0.175 Sum_probs=62.0
Q ss_pred EecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC-EEEEec-----CCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 10 TCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD-WIGTFE-----GHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 10 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
..+||...+.|-.|+| .+.+.+.+++.|+++++|++.+.+ ....++ +..-.+...+|++++.+|+.++.||+
T Consensus 263 nTKGHia~lt~g~whP--~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGS 340 (641)
T KOG0772|consen 263 NTKGHIAELTCGCWHP--DNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGS 340 (641)
T ss_pred ccCCceeeeecccccc--CcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCc
Confidence 4578999999999998 777899999999999999997654 222222 12224467799999999999999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
|.+|+
T Consensus 341 IQ~W~ 345 (641)
T KOG0772|consen 341 IQIWD 345 (641)
T ss_pred eeeee
Confidence 99996
No 130
>KOG2445|consensus
Probab=99.13 E-value=7.4e-10 Score=62.26 Aligned_cols=81 Identities=21% Similarity=0.286 Sum_probs=64.7
Q ss_pred eeEEecCCCCCEEEEEEEecCCCC-cEEEEEeCCCCEEEEECCCC--------------------CEEEEecCCCCeEEE
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESG-YFLISACKDGKPMLRQGDTG--------------------DWIGTFEGHKGCVWG 65 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~i~~ 65 (88)
.+..|.+|+.+|.+++|+|+..-. ..++.+++|| |.+|.+... ..+..+..|.+.++.
T Consensus 215 kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWr 293 (361)
T KOG2445|consen 215 KVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWR 293 (361)
T ss_pred eehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEE
Confidence 456677899999999999732222 4688899999 999977520 123456789999999
Q ss_pred EEECCCCCeEEEecCCCeEEEcC
Q psy6444 66 VDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 66 ~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
++|+-.|..+++.+.||.+|+|.
T Consensus 294 v~wNmtGtiLsStGdDG~VRLWk 316 (361)
T KOG2445|consen 294 VRWNMTGTILSSTGDDGCVRLWK 316 (361)
T ss_pred EEEeeeeeEEeecCCCceeeehh
Confidence 99999999999999999999994
No 131
>KOG0300|consensus
Probab=99.13 E-value=1.9e-10 Score=65.21 Aligned_cols=78 Identities=18% Similarity=0.254 Sum_probs=70.7
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEE
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
.++-+.||+..|..++.. .....+.+++.|..-++|.+.++.++..+.+|.+.+.++.|++.+.++++++.|++--+
T Consensus 140 lvre~~GHkDGiW~Vaa~---~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHI 216 (481)
T KOG0300|consen 140 LVRELEGHKDGIWHVAAD---STQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHI 216 (481)
T ss_pred ehhhhcccccceeeehhh---cCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHH
Confidence 455678899999999887 56678889999999999999999999999999999999999999999999999998777
Q ss_pred c
Q psy6444 87 L 87 (88)
Q Consensus 87 ~ 87 (88)
|
T Consensus 217 W 217 (481)
T KOG0300|consen 217 W 217 (481)
T ss_pred H
Confidence 7
No 132
>KOG0643|consensus
Probab=99.12 E-value=1e-09 Score=60.79 Aligned_cols=81 Identities=17% Similarity=0.230 Sum_probs=70.4
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCE-EEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDW-IGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
..|...+..+...+....|. +.++.++++..+|.|..||+.++.. +..-..|...|..++++++..++++++.|.+
T Consensus 137 ~ep~~kI~t~~skit~a~Wg---~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dtt 213 (327)
T KOG0643|consen 137 EEPYLKIPTPDSKITSALWG---PLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTT 213 (327)
T ss_pred cCceEEecCCccceeeeeec---ccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCcc
Confidence 44566777777888899999 7899999999999999999998764 4555678899999999999999999999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
-++||
T Consensus 214 akl~D 218 (327)
T KOG0643|consen 214 AKLVD 218 (327)
T ss_pred ceeee
Confidence 88886
No 133
>KOG2445|consensus
Probab=99.11 E-value=2.3e-09 Score=60.37 Aligned_cols=74 Identities=16% Similarity=0.267 Sum_probs=62.6
Q ss_pred cCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCC--C--EEEEecCCCCeEEEEEECC--CCCeEEEecCCCeEE
Q psy6444 12 SGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTG--D--WIGTFEGHKGCVWGVDINK--DASKAASGAADFQAK 85 (88)
Q Consensus 12 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~d~~i~ 85 (88)
.+|..-+.++.|. .-|+.+++++.|+.+++|+.... . +......|.+.|+.+.|.+ =|+.+++++.|+++.
T Consensus 10 s~h~DlihdVs~D---~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~ 86 (361)
T KOG2445|consen 10 SGHKDLIHDVSFD---FYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVS 86 (361)
T ss_pred cCCcceeeeeeec---ccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCcee
Confidence 3688889999999 79999999999999999996432 2 3456678999999999965 378889999999999
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
+|.
T Consensus 87 iWE 89 (361)
T KOG2445|consen 87 IWE 89 (361)
T ss_pred eee
Confidence 994
No 134
>KOG0641|consensus
Probab=99.09 E-value=2.8e-09 Score=58.19 Aligned_cols=70 Identities=24% Similarity=0.237 Sum_probs=64.4
Q ss_pred CCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 16 RPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
..|..++.. |.|++++++-.|....+||++-++.++.+..|...|++++|+|...++++++.|..|++-|
T Consensus 232 savaav~vd---psgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltd 301 (350)
T KOG0641|consen 232 SAVAAVAVD---PSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTD 301 (350)
T ss_pred ceeEEEEEC---CCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEee
Confidence 467888888 7999999999999999999999999999999999999999999999999999999998743
No 135
>KOG0288|consensus
Probab=99.09 E-value=9.6e-10 Score=63.68 Aligned_cols=68 Identities=15% Similarity=0.145 Sum_probs=60.6
Q ss_pred EEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCC--CeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 18 VVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHK--GCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 18 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
+..+.|+ |++.++++|+.|+.+.+|++.+++....+.... ..|.++.|+|.|..+++++.+..+.+|.
T Consensus 390 wtrvvfS---pd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 390 WTRVVFS---PDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred cceeEEC---CCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 6678899 799999999999999999999999887776644 3699999999999999999999999994
No 136
>KOG0301|consensus
Probab=99.07 E-value=4.3e-10 Score=68.41 Aligned_cols=76 Identities=25% Similarity=0.376 Sum_probs=41.5
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEE
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK 85 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 85 (88)
+....+.+|+..|.++..- +++ .+++|+.|+.|++|.- +..+..+.+|...|+++++-+++. +++++.|+.|+
T Consensus 131 ~l~~~l~gH~asVWAv~~l---~e~-~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~~-flScsNDg~Ir 203 (745)
T KOG0301|consen 131 ELVYSLQGHTASVWAVASL---PEN-TYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDSH-FLSCSNDGSIR 203 (745)
T ss_pred hhhcccCCcchheeeeeec---CCC-cEEeccCcceeeeccC--CchhhhhccchhheeeeEEecCCC-eEeecCCceEE
Confidence 3344455565555555554 222 5555666666666543 555566666666666665554333 44556666666
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
.|+
T Consensus 204 ~w~ 206 (745)
T KOG0301|consen 204 LWD 206 (745)
T ss_pred EEe
Confidence 664
No 137
>KOG0268|consensus
Probab=99.04 E-value=2.1e-10 Score=65.58 Aligned_cols=76 Identities=22% Similarity=0.215 Sum_probs=66.8
Q ss_pred eEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEc
Q psy6444 8 PLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKAL 87 (88)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 87 (88)
+-.|.||...|.+++=+| ..-..+++|+.||.+++|++....++..++.|.+.|..+++.. .-+++++.|.+++.|
T Consensus 59 v~~L~gHrdGV~~lakhp--~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~w 134 (433)
T KOG0268|consen 59 VGSLDGHRDGVSCLAKHP--NKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQW 134 (433)
T ss_pred hhhccccccccchhhcCc--chhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeee
Confidence 456789999999999985 4447899999999999999998888999999999999998876 567799999999988
No 138
>KOG0974|consensus
Probab=99.04 E-value=4e-09 Score=66.44 Aligned_cols=74 Identities=20% Similarity=0.293 Sum_probs=67.1
Q ss_pred EecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEE-EecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 10 TCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIG-TFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 10 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
.+.+|.+.+..+.++ .+|..+++.+.|..+++|++.+.+... ..-+|..+++...+.+. .+++++.|.++++|+
T Consensus 170 ~l~GHeG~iF~i~~s---~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~ 244 (967)
T KOG0974|consen 170 RLKGHEGSIFSIVTS---LDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWG 244 (967)
T ss_pred eecccCCceEEEEEc---cCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEe
Confidence 678999999999999 899999999999999999999877655 56679999999999987 889999999999993
No 139
>KOG1332|consensus
Probab=99.01 E-value=1.6e-09 Score=59.42 Aligned_cols=75 Identities=20% Similarity=0.213 Sum_probs=65.0
Q ss_pred ecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCC---CEEEEecCCCCeEEEEEECC--CCCeEEEecCCCeEE
Q psy6444 11 CSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTG---DWIGTFEGHKGCVWGVDINK--DASKAASGAADFQAK 85 (88)
Q Consensus 11 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~d~~i~ 85 (88)
-..|...|..+... .-|..+++++.|+.|++|.+.++ ..+..+.+|.+.++.++|.+ -|..+++++.|+.+.
T Consensus 7 dt~H~D~IHda~lD---yygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVI 83 (299)
T KOG1332|consen 7 DTQHEDMIHDAQLD---YYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVI 83 (299)
T ss_pred hhhhhhhhhHhhhh---hhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEE
Confidence 34588888888877 68999999999999999998764 36788999999999999966 688999999999999
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
+|.
T Consensus 84 iWk 86 (299)
T KOG1332|consen 84 IWK 86 (299)
T ss_pred EEe
Confidence 984
No 140
>KOG0289|consensus
Probab=99.01 E-value=9.7e-09 Score=60.09 Aligned_cols=76 Identities=20% Similarity=0.252 Sum_probs=65.6
Q ss_pred EecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecC--CCCeEEEEEECCCCCeEEEecCCCeEEEc
Q psy6444 10 TCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEG--HKGCVWGVDINKDASKAASGAADFQAKAL 87 (88)
Q Consensus 10 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 87 (88)
....|.++|..+..+ +.|++++++++|+...+.++.++..+..... ..-.+.+.+|+|||..+.++..|+.+++|
T Consensus 298 ~~~~h~~~V~~ls~h---~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiw 374 (506)
T KOG0289|consen 298 SSRPHEEPVTGLSLH---PTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIW 374 (506)
T ss_pred ccccccccceeeeec---cCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEE
Confidence 455688999999999 7999999999999999999998887655543 23356889999999999999999999999
Q ss_pred C
Q psy6444 88 K 88 (88)
Q Consensus 88 ~ 88 (88)
|
T Consensus 375 d 375 (506)
T KOG0289|consen 375 D 375 (506)
T ss_pred E
Confidence 7
No 141
>KOG1407|consensus
Probab=99.01 E-value=5.2e-09 Score=57.89 Aligned_cols=76 Identities=17% Similarity=0.191 Sum_probs=63.5
Q ss_pred EecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 10 TCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 10 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
..++|++.|..+.|+| +..+.+++++.|+.+++||+..++++.......+. ..+.|+|++.+++.+..|..|...|
T Consensus 59 ~~~gh~~svdql~w~~--~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~en-i~i~wsp~g~~~~~~~kdD~it~id 134 (313)
T KOG1407|consen 59 VYRGHTDSVDQLCWDP--KHPDLFATASGDKTIRIWDIRSGKCTARIETKGEN-INITWSPDGEYIAVGNKDDRITFID 134 (313)
T ss_pred cccCCCcchhhheeCC--CCCcceEEecCCceEEEEEeccCcEEEEeeccCcc-eEEEEcCCCCEEEEecCcccEEEEE
Confidence 4567999999999997 77899999999999999999999988877755444 4578999999999999887776543
No 142
>KOG0641|consensus
Probab=99.00 E-value=1.4e-08 Score=55.57 Aligned_cols=81 Identities=23% Similarity=0.248 Sum_probs=65.5
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecC--C-----CCeEEEEEECCCCCeEE
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEG--H-----KGCVWGVDINKDASKAA 76 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~i~~~~~~~~~~~~~ 76 (88)
.++....+.+|++.+..+ ++ =++-.+++++.|+.+++||++....+..+.. | ...+..++..|.|++++
T Consensus 172 ~g~~~~a~sghtghilal-ys---wn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~ 247 (350)
T KOG0641|consen 172 RGQGFHALSGHTGHILAL-YS---WNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLA 247 (350)
T ss_pred CCCcceeecCCcccEEEE-EE---ecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceee
Confidence 567788899999998775 34 4588999999999999999987766665532 1 26788999999999999
Q ss_pred EecCCCeEEEcC
Q psy6444 77 SGAADFQAKALK 88 (88)
Q Consensus 77 ~~~~d~~i~~~~ 88 (88)
++-.|.++.+||
T Consensus 248 sg~~dssc~lyd 259 (350)
T KOG0641|consen 248 SGHADSSCMLYD 259 (350)
T ss_pred eccCCCceEEEE
Confidence 999998887765
No 143
>KOG0639|consensus
Probab=98.99 E-value=8.2e-10 Score=65.69 Aligned_cols=82 Identities=17% Similarity=0.132 Sum_probs=69.0
Q ss_pred CccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEE---------------------------
Q psy6444 3 SIRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGT--------------------------- 55 (88)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 55 (88)
.+...++.|+||+..+.||+.+ .+|..+-+|+.|..++.||++.++.+..
T Consensus 539 hnq~~VrqfqGhtDGascIdis---~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~ 615 (705)
T KOG0639|consen 539 HNQTLVRQFQGHTDGASCIDIS---KDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSN 615 (705)
T ss_pred ccceeeecccCCCCCceeEEec---CCCceeecCCCccceeehhhhhhhhhhhhhhhhhheecccCCCccceeeecccCc
Confidence 3567889999999999999999 8999999999999999999875532211
Q ss_pred -------------ecCCCCeEEEEEECCCCCeEEEecCCCeEEEc
Q psy6444 56 -------------FEGHKGCVWGVDINKDASKAASGAADFQAKAL 87 (88)
Q Consensus 56 -------------~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 87 (88)
+--|..+|.++.|.+.|.++++.++|..+..|
T Consensus 616 vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnaw 660 (705)
T KOG0639|consen 616 VEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAW 660 (705)
T ss_pred EEEEecCCccceeecccccEEEEEEecccCceeeecCchhhhhhc
Confidence 11357889999999999999999999988877
No 144
>KOG0288|consensus
Probab=98.99 E-value=3.4e-10 Score=65.49 Aligned_cols=79 Identities=23% Similarity=0.245 Sum_probs=71.3
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEE
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
...+|.|..+.+..+.|. .++..+++++.|+.+.+|++........+.+|...+.++.|......+++++.|.+++.
T Consensus 211 ~~~tLaGs~g~it~~d~d---~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~ 287 (459)
T KOG0288|consen 211 LISTLAGSLGNITSIDFD---SDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKL 287 (459)
T ss_pred hhhhhhccCCCcceeeec---CCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhh
Confidence 455677888899999999 78999999999999999999988888999999999999999887777889999999999
Q ss_pred cC
Q psy6444 87 LK 88 (88)
Q Consensus 87 ~~ 88 (88)
||
T Consensus 288 WD 289 (459)
T KOG0288|consen 288 WD 289 (459)
T ss_pred hh
Confidence 97
No 145
>KOG1408|consensus
Probab=98.98 E-value=6.1e-09 Score=64.38 Aligned_cols=83 Identities=20% Similarity=0.297 Sum_probs=74.9
Q ss_pred CccceeEEecC---CCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEec
Q psy6444 3 SIRQIPLTCSG---HTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGA 79 (88)
Q Consensus 3 ~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 79 (88)
..++..+.+++ |.+....+... |.|.++++.+.|+.+.++|+.+++++..+.+|...|+.+.|.+|-.++++.+
T Consensus 626 ~sgKq~k~FKgs~~~eG~lIKv~lD---PSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvs 702 (1080)
T KOG1408|consen 626 ESGKQVKSFKGSRDHEGDLIKVILD---PSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVS 702 (1080)
T ss_pred cccceeeeecccccCCCceEEEEEC---CCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccchhheeec
Confidence 36778888887 44667788888 7999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEcC
Q psy6444 80 ADFQAKALK 88 (88)
Q Consensus 80 ~d~~i~~~~ 88 (88)
.|+-|.+|.
T Consensus 703 gDgCIFvW~ 711 (1080)
T KOG1408|consen 703 GDGCIFVWK 711 (1080)
T ss_pred CCceEEEEE
Confidence 999999994
No 146
>KOG0644|consensus
Probab=98.98 E-value=1.6e-10 Score=71.85 Aligned_cols=78 Identities=21% Similarity=0.316 Sum_probs=69.9
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
+...+..+.||.+.+..++.+ .+.-.+++++.|..|++|.++.+..+..+.+|.+.|++++|+|.. +.+.|++
T Consensus 221 t~~~lAs~rGhs~ditdlavs---~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt 293 (1113)
T KOG0644|consen 221 TARCLASCRGHSGDITDLAVS---SNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGT 293 (1113)
T ss_pred chhhhccCCCCccccchhccc---hhhhhhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccc----cCCCCCc
Confidence 455677889999999999988 677788999999999999999999999999999999999999964 6789999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
+++||
T Consensus 294 ~~~wd 298 (1113)
T KOG0644|consen 294 CRIWD 298 (1113)
T ss_pred eEecc
Confidence 99997
No 147
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.98 E-value=3e-08 Score=53.28 Aligned_cols=69 Identities=25% Similarity=0.240 Sum_probs=52.5
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCC---CCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecC------CCeEE
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKD---GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAA------DFQAK 85 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------d~~i~ 85 (88)
+..+..+.|+ |+|+.++.++.+ |.+.+||..+...+..... ..+..++|+|+|++++++.. |..++
T Consensus 100 ~~~~n~i~ws---P~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~--~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~ 174 (194)
T PF08662_consen 100 TQPRNTISWS---PDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEH--SDATDVEWSPDGRYLATATTSPRLRVDNGFK 174 (194)
T ss_pred CCCceEEEEC---CCCCEEEEEEccCCCcEEEEEECCCCEEeecccc--CcEEEEEEcCCCCEEEEEEeccceeccccEE
Confidence 4566789999 799999987654 5699999987777666543 34688999999999997653 55666
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
+|+
T Consensus 175 Iw~ 177 (194)
T PF08662_consen 175 IWS 177 (194)
T ss_pred EEE
Confidence 663
No 148
>KOG0321|consensus
Probab=98.97 E-value=1.6e-09 Score=65.58 Aligned_cols=77 Identities=18% Similarity=0.157 Sum_probs=66.5
Q ss_pred EEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEE--ecCCCCeEEEEEECCCCC-eEEEecCCCeEE
Q psy6444 9 LTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGT--FEGHKGCVWGVDINKDAS-KAASGAADFQAK 85 (88)
Q Consensus 9 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~ 85 (88)
+-...|...|.++.|. +....|++++-|..+++||+..+..+.. +.+|.+.+..++|.+... .+.+++.|+.+.
T Consensus 94 k~~~aH~nAifDl~wa---pge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~il 170 (720)
T KOG0321|consen 94 KKPLAHKNAIFDLKWA---PGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEIL 170 (720)
T ss_pred cccccccceeEeeccC---CCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEE
Confidence 3445699999999999 6667889999999999999998887766 899999999999999644 667899999999
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
+||
T Consensus 171 lWD 173 (720)
T KOG0321|consen 171 LWD 173 (720)
T ss_pred EEE
Confidence 997
No 149
>KOG1063|consensus
Probab=98.97 E-value=3.2e-09 Score=64.81 Aligned_cols=78 Identities=24% Similarity=0.207 Sum_probs=67.7
Q ss_pred eEEecCCCCCEEEEEEEecCCCCcEEEEEeCCC-----CEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCC
Q psy6444 8 PLTCSGHTRPVVHLAFSDITESGYFLISACKDG-----KPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADF 82 (88)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~ 82 (88)
+..|.||.-.|.+++.+ ++|+.++++++.. .|.+|+..+-.....+.+|.-.|..++|+|+++++++.+.|.
T Consensus 518 v~KLYGHGyEv~~l~~s---~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDR 594 (764)
T KOG1063|consen 518 VHKLYGHGYEVYALAIS---PTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDR 594 (764)
T ss_pred hHHhccCceeEEEEEec---CCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCc
Confidence 45678999999999999 7999999988754 477888876566677899999999999999999999999999
Q ss_pred eEEEcC
Q psy6444 83 QAKALK 88 (88)
Q Consensus 83 ~i~~~~ 88 (88)
+..+|.
T Consensus 595 t~sl~~ 600 (764)
T KOG1063|consen 595 TVSLYE 600 (764)
T ss_pred eEEeee
Confidence 998874
No 150
>KOG2919|consensus
Probab=98.97 E-value=5.6e-09 Score=59.30 Aligned_cols=82 Identities=23% Similarity=0.202 Sum_probs=63.9
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeC-CCCEEEEECCCCC-EEEEecCCC---CeEEEEEECCCCCeEEEe
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACK-DGKPMLRQGDTGD-WIGTFEGHK---GCVWGVDINKDASKAASG 78 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~---~~i~~~~~~~~~~~~~~~ 78 (88)
++.++..+-+|.+.|..+.|+ ++|+.++++.. +-.|..||++... .+..+..|. +.-.-.+..|+++.++++
T Consensus 239 ~~~pl~llggh~gGvThL~~~---edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG 315 (406)
T KOG2919|consen 239 GRRPLQLLGGHGGGVTHLQWC---EDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASG 315 (406)
T ss_pred CCCceeeecccCCCeeeEEec---cCcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeecc
Confidence 456788888999999999999 89999888665 5679999998654 344444443 333344678899999999
Q ss_pred cCCCeEEEcC
Q psy6444 79 AADFQAKALK 88 (88)
Q Consensus 79 ~~d~~i~~~~ 88 (88)
+.||.|++||
T Consensus 316 ~tdG~V~vwd 325 (406)
T KOG2919|consen 316 DTDGSVRVWD 325 (406)
T ss_pred CCCccEEEEe
Confidence 9999999997
No 151
>KOG2048|consensus
Probab=98.96 E-value=2.5e-08 Score=60.79 Aligned_cols=83 Identities=14% Similarity=0.119 Sum_probs=68.8
Q ss_pred CccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEE--EecCCCCeEEEEEECCCCCeEEEecC
Q psy6444 3 SIRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIG--TFEGHKGCVWGVDINKDASKAASGAA 80 (88)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~ 80 (88)
.+.+++..+....+.+..++.+ +.+..++.++.||.+.+++...+.... .+...++++.+++|++++..+++|+.
T Consensus 98 ~~lk~~~~~d~~gg~IWsiai~---p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~ 174 (691)
T KOG2048|consen 98 HTLKQKYNIDSNGGAIWSIAIN---PENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSI 174 (691)
T ss_pred ccCceeEEecCCCcceeEEEeC---CccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEeccc
Confidence 3566777777778899999999 678888999999988788877665443 34556789999999999999999999
Q ss_pred CCeEEEcC
Q psy6444 81 DFQAKALK 88 (88)
Q Consensus 81 d~~i~~~~ 88 (88)
|+.|++||
T Consensus 175 Dg~Iriwd 182 (691)
T KOG2048|consen 175 DGVIRIWD 182 (691)
T ss_pred CceEEEEE
Confidence 99999997
No 152
>KOG0299|consensus
Probab=98.95 E-value=2.1e-09 Score=62.88 Aligned_cols=82 Identities=24% Similarity=0.250 Sum_probs=68.7
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
+..+++++.+|.+.|.+++|- ..-..+++++.|..+++|+++.-..+..+.+|...|..+......+.+-.++.|.+
T Consensus 233 t~ehv~~~~ghr~~V~~L~fr---~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT 309 (479)
T KOG0299|consen 233 TLEHVKVFKGHRGAVSSLAFR---KGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGGRDRT 309 (479)
T ss_pred ccchhhcccccccceeeeeee---cCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcccceEEeccccce
Confidence 456778899999999999997 55678999999999999999876677788899999998877666666656669999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
+++|+
T Consensus 310 ~rlwK 314 (479)
T KOG0299|consen 310 VRLWK 314 (479)
T ss_pred eEEEe
Confidence 99985
No 153
>KOG1274|consensus
Probab=98.93 E-value=1.6e-08 Score=63.34 Aligned_cols=71 Identities=21% Similarity=0.223 Sum_probs=66.4
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
+-++.+++++ .+|.+++.|+.|..|++-+.........+.+|...|.++.++|++.++++.+-||.+++||
T Consensus 96 tlp~r~~~v~---g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~ 166 (933)
T KOG1274|consen 96 TLPIRDLAVS---GSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWD 166 (933)
T ss_pred eccceEEEEe---cCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEE
Confidence 4577889999 8999999999999999999988888899999999999999999999999999999999996
No 154
>KOG1524|consensus
Probab=98.93 E-value=2.6e-09 Score=64.03 Aligned_cols=81 Identities=22% Similarity=0.302 Sum_probs=65.1
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECC---------CCCE-----------------------
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGD---------TGDW----------------------- 52 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~----------------------- 52 (88)
+...+....|.+.+.+-+|+ ++|.-+++++.||.+++|.-. .+..
T Consensus 94 ~rVE~sv~AH~~A~~~gRW~---~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~h~~I 170 (737)
T KOG1524|consen 94 ARVERSISAHAAAISSGRWS---PDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPNSNSIVFCQGGHISI 170 (737)
T ss_pred chhhhhhhhhhhhhhhcccC---CCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECCCCCceEEecCCeEEE
Confidence 34455667788999999999 799999999999999999532 1111
Q ss_pred --------EEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 53 --------IGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 53 --------~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
+-....|.+.|.+++|++.+..++++++|...++||
T Consensus 171 KpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD 214 (737)
T KOG1524|consen 171 KPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWD 214 (737)
T ss_pred eecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeec
Confidence 112357899999999999999999999999999998
No 155
>KOG1036|consensus
Probab=98.93 E-value=2.2e-08 Score=56.31 Aligned_cols=72 Identities=18% Similarity=0.218 Sum_probs=62.7
Q ss_pred cCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 12 SGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 12 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
-.|.+++.+++|. +...+++++-|+.++.+|+..+. ...+..|...+.++..++....+++++.|++|++||
T Consensus 51 ~~~~~plL~c~F~----d~~~~~~G~~dg~vr~~Dln~~~-~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD 122 (323)
T KOG1036|consen 51 FKHGAPLLDCAFA----DESTIVTGGLDGQVRRYDLNTGN-EDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWD 122 (323)
T ss_pred eecCCceeeeecc----CCceEEEeccCceEEEEEecCCc-ceeeccCCCceEEEEeeccCCeEEEcccCccEEEEe
Confidence 3478999999996 57788999999999999997655 466677999999999999888999999999999997
No 156
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.92 E-value=5e-08 Score=52.44 Aligned_cols=68 Identities=15% Similarity=0.061 Sum_probs=51.5
Q ss_pred CCCEEEEEEEecCCCCcEEEE--EeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCC---CeEEEcC
Q psy6444 15 TRPVVHLAFSDITESGYFLIS--ACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAAD---FQAKALK 88 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d---~~i~~~~ 88 (88)
.++|.+++|+ |+|+.++. +..+..+.+|++. ...+..+. ...+..+.|+|+|++++.++.+ |.+.+||
T Consensus 59 ~~~I~~~~Ws---P~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd 131 (194)
T PF08662_consen 59 EGPIHDVAWS---PNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWD 131 (194)
T ss_pred CCceEEEEEC---cCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEE
Confidence 4579999999 68876543 3345689999996 66666664 3566789999999999987643 5699997
No 157
>KOG1445|consensus
Probab=98.92 E-value=9.9e-09 Score=62.85 Aligned_cols=73 Identities=19% Similarity=0.192 Sum_probs=62.9
Q ss_pred CCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 13 GHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 13 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
+....|.++.|+| ..+.+......+.+.+||+.+++.+..+.+|...|.+..|+.||.+++++++|..|++||
T Consensus 126 ~~~~~vE~l~fHp---TaDgil~s~a~g~v~i~D~stqk~~~el~~h~d~vQSa~WseDG~llatscKdkqirifD 198 (1012)
T KOG1445|consen 126 GGNVIVECLRFHP---TADGILASGAHGSVYITDISTQKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFD 198 (1012)
T ss_pred CCceEEEEeeccc---CcCceEEeccCceEEEEEcccCceeecccCCchhhhccccccCCceEeeecCCcceEEeC
Confidence 3445688999994 555555555678999999999999999999999999999999999999999999999997
No 158
>KOG0771|consensus
Probab=98.91 E-value=4.1e-09 Score=60.93 Aligned_cols=66 Identities=24% Similarity=0.136 Sum_probs=58.3
Q ss_pred EEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 19 VHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
..++|+ .+|..+++++.||.+++|+.++-..+.....|.+.|..++|+||+..+++.+.| ..+||+
T Consensus 148 k~vaf~---~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~ 213 (398)
T KOG0771|consen 148 KVVAFN---GDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWS 213 (398)
T ss_pred eEEEEc---CCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEE
Confidence 457788 899999999999999999977666666677789999999999999999999998 899996
No 159
>KOG0290|consensus
Probab=98.89 E-value=5.3e-08 Score=54.80 Aligned_cols=79 Identities=18% Similarity=0.218 Sum_probs=61.8
Q ss_pred eeEEecCCCCCEEEEEEEecCCCC-cEEEEEeCCCCEEEEECCCCC----------------------------------
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESG-YFLISACKDGKPMLRQGDTGD---------------------------------- 51 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------------------------------- 51 (88)
....|-.|...|.+++|. ..+ +.+++.+.||++++||++.-+
T Consensus 188 vkTQLIAHDKEV~DIaf~---~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~d 264 (364)
T KOG0290|consen 188 VKTQLIAHDKEVYDIAFL---KGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMD 264 (364)
T ss_pred eeeEEEecCcceeEEEec---cCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcC
Confidence 455667799999999998 444 789999999999999876311
Q ss_pred --------------EEEEecCCCCeEEEEEECCCCC-eEEEecCCCeEEEcC
Q psy6444 52 --------------WIGTFEGHKGCVWGVDINKDAS-KAASGAADFQAKALK 88 (88)
Q Consensus 52 --------------~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~ 88 (88)
.+..+.+|.+.|.+++|.|... .+.+++.|....+||
T Consensus 265 S~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWD 316 (364)
T KOG0290|consen 265 SNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWD 316 (364)
T ss_pred CceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEe
Confidence 0112247899999999999755 666888999999997
No 160
>KOG1538|consensus
Probab=98.88 E-value=3.6e-09 Score=65.01 Aligned_cols=44 Identities=18% Similarity=0.249 Sum_probs=40.1
Q ss_pred CCccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECC
Q psy6444 2 ASIRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGD 48 (88)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 48 (88)
+.+|..++++++|+..|.+++|+ .+|+.+++|+.|+.+.+|...
T Consensus 40 ~ndG~llqtLKgHKDtVycVAys---~dGkrFASG~aDK~VI~W~~k 83 (1081)
T KOG1538|consen 40 TSDGTLLQPLKGHKDTVYCVAYA---KDGKRFASGSADKSVIIWTSK 83 (1081)
T ss_pred CCCcccccccccccceEEEEEEc---cCCceeccCCCceeEEEeccc
Confidence 34678899999999999999999 899999999999999999754
No 161
>KOG4328|consensus
Probab=98.88 E-value=9.3e-09 Score=60.34 Aligned_cols=82 Identities=12% Similarity=0.102 Sum_probs=65.5
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCC--CCE--EEEecCCCCeEEEEEECCCCCeEEEecC
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDT--GDW--IGTFEGHKGCVWGVDINKDASKAASGAA 80 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 80 (88)
+.....++-|...|..++++| -+-..+++++.|+..+|||.+. ++. +-....|...|.+..|+|.+-.+++.+.
T Consensus 312 ~s~~~~~~lh~kKI~sv~~NP--~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~ 389 (498)
T KOG4328|consen 312 GSEYENLRLHKKKITSVALNP--VCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQ 389 (498)
T ss_pred CccchhhhhhhcccceeecCC--CCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeecc
Confidence 333455666888999999996 5557899999999999999874 222 2334458899999999998888999999
Q ss_pred CCeEEEcC
Q psy6444 81 DFQAKALK 88 (88)
Q Consensus 81 d~~i~~~~ 88 (88)
|..||+||
T Consensus 390 D~~IRv~d 397 (498)
T KOG4328|consen 390 DNEIRVFD 397 (498)
T ss_pred CCceEEee
Confidence 99999997
No 162
>KOG0307|consensus
Probab=98.85 E-value=5.3e-09 Score=66.43 Aligned_cols=81 Identities=17% Similarity=0.253 Sum_probs=71.8
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCC-eEEEecCCCe
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDAS-KAASGAADFQ 83 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~ 83 (88)
..+++++++|...|.++.|++ .+..+++++++|+.+.+|+..+++.+..+....+.++.+.|+|... .++.++.||.
T Consensus 243 ssP~k~~~~H~~GilslsWc~--~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgk 320 (1049)
T KOG0307|consen 243 SSPLKILEGHQRGILSLSWCP--QDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGK 320 (1049)
T ss_pred CCchhhhcccccceeeeccCC--CCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccc
Confidence 457788899999999999996 6668999999999999999999999999998889999999999655 7778889998
Q ss_pred EEEc
Q psy6444 84 AKAL 87 (88)
Q Consensus 84 i~~~ 87 (88)
|-++
T Consensus 321 I~I~ 324 (1049)
T KOG0307|consen 321 ISIY 324 (1049)
T ss_pred eeee
Confidence 8775
No 163
>KOG0649|consensus
Probab=98.85 E-value=4.6e-08 Score=53.97 Aligned_cols=68 Identities=19% Similarity=0.174 Sum_probs=55.5
Q ss_pred EEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 18 VVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 18 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
|.+.-.. |..+-++.++-|+.+..||+.+++.-+.+.+|..-+.++.......+++++++||++|+||
T Consensus 117 INam~ld---P~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd 184 (325)
T KOG0649|consen 117 INAMWLD---PSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWD 184 (325)
T ss_pred cceeEec---cCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEe
Confidence 5566666 4454455555788999999999999899999999999998755666788999999999997
No 164
>KOG0642|consensus
Probab=98.83 E-value=1.5e-08 Score=60.72 Aligned_cols=79 Identities=29% Similarity=0.306 Sum_probs=68.9
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCC--------CCEEEEecCCCCeEEEEEECCCCCeEEEe
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDT--------GDWIGTFEGHKGCVWGVDINKDASKAASG 78 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 78 (88)
+..++..|...+....|+ +....+++++.++.+.+|.++. -+.+..+.+|.+.|.++++...+.+..++
T Consensus 286 ik~tl~s~~d~ir~l~~~---~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysg 362 (577)
T KOG0642|consen 286 IKFTLRSHDDCIRALAFH---PSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSG 362 (577)
T ss_pred eeeeeecchhhhhhhhcC---CCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEee
Confidence 445778888889999998 6778999999999999998832 23678899999999999999999999999
Q ss_pred cCCCeEEEcC
Q psy6444 79 AADFQAKALK 88 (88)
Q Consensus 79 ~~d~~i~~~~ 88 (88)
+.|++|+.|+
T Consensus 363 g~Dg~I~~w~ 372 (577)
T KOG0642|consen 363 GIDGTIRCWN 372 (577)
T ss_pred ccCceeeeec
Confidence 9999999994
No 165
>KOG2139|consensus
Probab=98.82 E-value=1.1e-07 Score=54.97 Aligned_cols=77 Identities=22% Similarity=0.264 Sum_probs=60.9
Q ss_pred eEEecCCCCCEEEEEEEecCCCCcEEEEEeCC-CCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEE
Q psy6444 8 PLTCSGHTRPVVHLAFSDITESGYFLISACKD-GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
+..-.+| .+|..++|+ ++|..+++++.+ ..+.+||.+.+..+.......+.+.-+.|+||+.++..+.-|+..++
T Consensus 189 vl~~pgh-~pVtsmqwn---~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrl 264 (445)
T KOG2139|consen 189 VLQDPGH-NPVTSMQWN---EDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRL 264 (445)
T ss_pred heeCCCC-ceeeEEEEc---CCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeee
Confidence 3444455 789999999 789888877664 56999999887755444445567788999999999999999999999
Q ss_pred cC
Q psy6444 87 LK 88 (88)
Q Consensus 87 ~~ 88 (88)
|+
T Consensus 265 w~ 266 (445)
T KOG2139|consen 265 WQ 266 (445)
T ss_pred eh
Confidence 94
No 166
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.82 E-value=2.8e-07 Score=52.62 Aligned_cols=80 Identities=31% Similarity=0.395 Sum_probs=68.3
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeC-CCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCC-eEEEecCCCe
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACK-DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDAS-KAASGAADFQ 83 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~ 83 (88)
.....+..|...+..+.|+ +++..++.++. ++.+.+|+...+..+..+.+|...+..++|+|++. .+++++.|+.
T Consensus 146 ~~~~~~~~~~~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~ 222 (466)
T COG2319 146 KLIRTLEGHSESVTSLAFS---PDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGT 222 (466)
T ss_pred eEEEEEecCcccEEEEEEC---CCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCc
Confidence 5566778899999999999 78888888875 99999999988788888888999999999999887 5556689999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
+++||
T Consensus 223 i~~wd 227 (466)
T COG2319 223 IRLWD 227 (466)
T ss_pred EEEEE
Confidence 99884
No 167
>KOG1272|consensus
Probab=98.81 E-value=2.9e-09 Score=62.68 Aligned_cols=82 Identities=10% Similarity=0.070 Sum_probs=66.4
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
.|+.+..+....+.+....-+| -.-.+-.|..+|.|.+|.....+.+..+..|.+.|.++++.++|+++++++.|..
T Consensus 240 ~GklVa~~~t~~G~~~vm~qNP---~NaVih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~ 316 (545)
T KOG1272|consen 240 TGKLVASIRTGAGRTDVMKQNP---YNAVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRK 316 (545)
T ss_pred hhhhhHHHHccCCccchhhcCC---ccceEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccc
Confidence 3445555555556666666663 3446677888999999998888888889999999999999999999999999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
++|||
T Consensus 317 ~kIWD 321 (545)
T KOG1272|consen 317 VKIWD 321 (545)
T ss_pred eeEee
Confidence 99998
No 168
>KOG0270|consensus
Probab=98.81 E-value=9.3e-08 Score=56.04 Aligned_cols=85 Identities=15% Similarity=0.070 Sum_probs=65.4
Q ss_pred CCccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCC-eEEEecC
Q psy6444 2 ASIRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDAS-KAASGAA 80 (88)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~ 80 (88)
+..+++..++..|...|.++.|+| .....+++|+.|+++.+.|.+........=...+.|-.++|.|... .++++..
T Consensus 273 ~~~g~p~~s~~~~~k~Vq~l~wh~--~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~td 350 (463)
T KOG0270|consen 273 VDTGKPKSSITHHGKKVQTLEWHP--YEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVSTD 350 (463)
T ss_pred cCCCCcceehhhcCCceeEEEecC--CCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEEEecC
Confidence 457788899999999999999998 7889999999999999999874222111111346788889988655 4457778
Q ss_pred CCeEEEcC
Q psy6444 81 DFQAKALK 88 (88)
Q Consensus 81 d~~i~~~~ 88 (88)
||+++-+|
T Consensus 351 dG~v~~~D 358 (463)
T KOG0270|consen 351 DGTVYYFD 358 (463)
T ss_pred CceEEeee
Confidence 99998765
No 169
>KOG1538|consensus
Probab=98.78 E-value=5.3e-08 Score=60.13 Aligned_cols=67 Identities=25% Similarity=0.396 Sum_probs=58.9
Q ss_pred CEEEEEEEecCCCCcE-EEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 17 PVVHLAFSDITESGYF-LISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 17 ~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
.|..++|. |+|.. ++.++ ..+.+||...|..++.+++|+..|.+++|+.+|..+++++.|..+.+|+
T Consensus 14 ci~d~afk---PDGsqL~lAAg--~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~ 81 (1081)
T KOG1538|consen 14 CINDIAFK---PDGTQLILAAG--SRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWT 81 (1081)
T ss_pred chheeEEC---CCCceEEEecC--CEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEec
Confidence 67889999 68854 44443 4688999999999999999999999999999999999999999999995
No 170
>KOG0644|consensus
Probab=98.75 E-value=2.1e-09 Score=67.09 Aligned_cols=79 Identities=16% Similarity=0.279 Sum_probs=72.2
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEE
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
.++.+.+|..+|.|..|. ..|..++++++|..+++|...+..++..+.||.+.|..++.+.....+++++.|.-|++
T Consensus 182 ~ikrLlgH~naVyca~fD---rtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrv 258 (1113)
T KOG0644|consen 182 NIKRLLGHRNAVYCAIFD---RTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRV 258 (1113)
T ss_pred HHHHHHhhhhheeeeeec---cccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEE
Confidence 455678999999999999 79999999999999999999999999999999999999998888888899999999999
Q ss_pred cC
Q psy6444 87 LK 88 (88)
Q Consensus 87 ~~ 88 (88)
|.
T Consensus 259 Wr 260 (1113)
T KOG0644|consen 259 WR 260 (1113)
T ss_pred Ee
Confidence 93
No 171
>KOG2106|consensus
Probab=98.74 E-value=4.4e-07 Score=54.40 Aligned_cols=73 Identities=16% Similarity=0.242 Sum_probs=59.9
Q ss_pred ecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC-E---EEEecCCCCeEEEEEECCCCCeEEEecCCCeEEE
Q psy6444 11 CSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD-W---IGTFEGHKGCVWGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 11 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
+...++++.+++|+ ++|..++.++.|+.+.+|.+..+. . ...+.+ ..|.+++|++|++++.+.+.|-.|..
T Consensus 443 ~~~d~~~ls~v~ys---p~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~g--s~ithLDwS~Ds~~~~~~S~d~eiLy 517 (626)
T KOG2106|consen 443 IHTDNEQLSVVRYS---PDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSG--SPITHLDWSSDSQFLVSNSGDYEILY 517 (626)
T ss_pred EEecCCceEEEEEc---CCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecC--ceeEEeeecCCCceEEeccCceEEEE
Confidence 33347889999999 799999999999999999886543 2 233344 78999999999999999999999988
Q ss_pred cC
Q psy6444 87 LK 88 (88)
Q Consensus 87 ~~ 88 (88)
|.
T Consensus 518 W~ 519 (626)
T KOG2106|consen 518 WK 519 (626)
T ss_pred Ec
Confidence 83
No 172
>KOG3881|consensus
Probab=98.74 E-value=2.1e-07 Score=53.92 Aligned_cols=81 Identities=16% Similarity=0.211 Sum_probs=68.7
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEE-ecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGT-FEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
..|+..+.-...++.++... +.++.++.+...+.+..||.+.+..+.. +.+..+.+..+..+|.+.++++++-|..
T Consensus 237 RRPV~~fd~~E~~is~~~l~---p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRy 313 (412)
T KOG3881|consen 237 RRPVAQFDFLENPISSTGLT---PSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRY 313 (412)
T ss_pred CcceeEeccccCcceeeeec---CCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeecccee
Confidence 34555555556677777777 7899999999999999999998887766 8888999999999999999999999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
+|++|
T Consensus 314 vRIhD 318 (412)
T KOG3881|consen 314 VRIHD 318 (412)
T ss_pred EEEee
Confidence 99987
No 173
>KOG1036|consensus
Probab=98.73 E-value=4.4e-08 Score=55.11 Aligned_cols=60 Identities=15% Similarity=0.103 Sum_probs=54.1
Q ss_pred CEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEec
Q psy6444 17 PVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGA 79 (88)
Q Consensus 17 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 79 (88)
+|..++|+ +-.+.+++|+.||.|.+|+..+.+.+..+......|..++|+.+|..+|.++
T Consensus 234 PVNai~Fh---p~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~ 293 (323)
T KOG1036|consen 234 PVNAIAFH---PIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIAS 293 (323)
T ss_pred EeceeEec---cccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEe
Confidence 68889999 5688999999999999999999999999988888899999999999998654
No 174
>KOG0307|consensus
Probab=98.73 E-value=7.7e-09 Score=65.71 Aligned_cols=80 Identities=25% Similarity=0.212 Sum_probs=63.5
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEec--CCCCeEEEEEECCCCC-eEEEecCCCe
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFE--GHKGCVWGVDINKDAS-KAASGAADFQ 83 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~-~~~~~~~d~~ 83 (88)
.+.++..|++.|..++|++ ..++++++|..+|.|.|||+.+-....... .....|.+++|+..-. .+++++.+++
T Consensus 108 ~la~~~~h~G~V~gLDfN~--~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~ 185 (1049)
T KOG0307|consen 108 VLATKSKHTGPVLGLDFNP--FQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGR 185 (1049)
T ss_pred HHhhhcccCCceeeeeccc--cCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCC
Confidence 4566778999999999996 666799999999999999998654333332 2457899999988644 5567888889
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
..+||
T Consensus 186 ~~iWD 190 (1049)
T KOG0307|consen 186 AVIWD 190 (1049)
T ss_pred ceecc
Confidence 99998
No 175
>KOG1034|consensus
Probab=98.70 E-value=1.3e-07 Score=53.91 Aligned_cols=75 Identities=17% Similarity=0.243 Sum_probs=60.2
Q ss_pred CCCCEEEEEEEecCCCC-cEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCC-CeEEEecCCCeEEEcC
Q psy6444 14 HTRPVVHLAFSDITESG-YFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDA-SKAASGAADFQAKALK 88 (88)
Q Consensus 14 ~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~~~ 88 (88)
|.+...-++|+....++ .+++.++.-|.|++.|+.++.....+.+|.+.|..+.+.|+. ++++++++|.++|+||
T Consensus 88 ~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwn 164 (385)
T KOG1034|consen 88 HDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWN 164 (385)
T ss_pred CCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEe
Confidence 44455666776322333 477888888999999998888889999999999999999965 5677999999999996
No 176
>KOG0650|consensus
Probab=98.70 E-value=4.5e-08 Score=59.43 Aligned_cols=82 Identities=17% Similarity=0.094 Sum_probs=66.0
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEE------CCCCC---EEEEecCCCCe----EEEEEECC
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQ------GDTGD---WIGTFEGHKGC----VWGVDINK 70 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~---~~~~~~~~~~~----i~~~~~~~ 70 (88)
..++.+++.-|...+..++|+ ..-.++++++.|+.+.+|- +-... .+..+.+|... |....|+|
T Consensus 639 sskPyk~lr~H~~avr~Va~H---~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP 715 (733)
T KOG0650|consen 639 SSKPYKTLRLHEKAVRSVAFH---KRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHP 715 (733)
T ss_pred CcchhHHhhhhhhhhhhhhhc---cccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccC
Confidence 457888889999999999999 6778999999999988872 21122 34556677554 88889999
Q ss_pred CCCeEEEecCCCeEEEcC
Q psy6444 71 DASKAASGAADFQAKALK 88 (88)
Q Consensus 71 ~~~~~~~~~~d~~i~~~~ 88 (88)
..-++.+++.|++|++|-
T Consensus 716 ~qpWLfsAGAd~tirlfT 733 (733)
T KOG0650|consen 716 RQPWLFSAGADGTIRLFT 733 (733)
T ss_pred CCceEEecCCCceEEeeC
Confidence 999999999999999983
No 177
>KOG0321|consensus
Probab=98.69 E-value=5.6e-08 Score=59.25 Aligned_cols=77 Identities=23% Similarity=0.272 Sum_probs=58.4
Q ss_pred EecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC---------------------------EEEEecCCCCe
Q psy6444 10 TCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD---------------------------WIGTFEGHKGC 62 (88)
Q Consensus 10 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~ 62 (88)
.+.||++.|-.++|+| .+...+++|+.|+.+.+||+.-.. .+.....+.+.
T Consensus 139 ~~~GH~~SvkS~cf~~--~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~t 216 (720)
T KOG0321|consen 139 LNLGHTGSVKSECFMP--TNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNT 216 (720)
T ss_pred eecccccccchhhhcc--CCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCc
Confidence 3778999999999998 888899999999999999875221 11112233344
Q ss_pred EEE---EEECCCCCeEEEecC-CCeEEEcC
Q psy6444 63 VWG---VDINKDASKAASGAA-DFQAKALK 88 (88)
Q Consensus 63 i~~---~~~~~~~~~~~~~~~-d~~i~~~~ 88 (88)
|.. +-+..|...+++++. |+.|+|||
T Consensus 217 i~ssvTvv~fkDe~tlaSaga~D~~iKVWD 246 (720)
T KOG0321|consen 217 IFSSVTVVLFKDESTLASAGAADSTIKVWD 246 (720)
T ss_pred eeeeeEEEEEeccceeeeccCCCcceEEEe
Confidence 544 566778889998776 99999998
No 178
>KOG2394|consensus
Probab=98.69 E-value=1.9e-07 Score=56.17 Aligned_cols=53 Identities=15% Similarity=0.206 Sum_probs=48.8
Q ss_pred CCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEEC
Q psy6444 14 HTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDIN 69 (88)
Q Consensus 14 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 69 (88)
.-+...|++|+ +||++++++++|-.+.+|.+...+.+..-.+|+.+|..++|.
T Consensus 331 YFGGLLCvcWS---PDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFD 383 (636)
T KOG2394|consen 331 YFGGLLCVCWS---PDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFD 383 (636)
T ss_pred hccceEEEEEc---CCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeec
Confidence 34678899999 899999999999999999999888889999999999999998
No 179
>KOG1408|consensus
Probab=98.68 E-value=1.2e-07 Score=58.88 Aligned_cols=75 Identities=16% Similarity=0.183 Sum_probs=63.2
Q ss_pred ecCCCCCEEEEEEEecCCCCcEEEEEe--CCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEec--CCCeEEE
Q psy6444 11 CSGHTRPVVHLAFSDITESGYFLISAC--KDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGA--ADFQAKA 86 (88)
Q Consensus 11 ~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~d~~i~~ 86 (88)
+..++.++.+++|+ ++|+++++|- ....+++|++.....+..+..|+-.+.+++|+|.+.++.+.+ +|..+.+
T Consensus 74 vnssRk~~t~vAfS---~~GryvatGEcG~~pa~kVw~la~h~vVAEfvdHKY~vtcvaFsp~~kyvvSVGsQHDMIVnv 150 (1080)
T KOG1408|consen 74 VNSSRKPLTCVAFS---QNGRYVATGECGRTPASKVWSLAFHGVVAEFVDHKYNVTCVAFSPGNKYVVSVGSQHDMIVNV 150 (1080)
T ss_pred ecccCcceeEEEEc---CCCcEEEecccCCCccceeeeeccccchhhhhhccccceeeeecCCCcEEEeeccccceEEEh
Confidence 44577899999999 7999999865 455799999988778888999999999999999999998765 6667777
Q ss_pred cC
Q psy6444 87 LK 88 (88)
Q Consensus 87 ~~ 88 (88)
||
T Consensus 151 ~d 152 (1080)
T KOG1408|consen 151 ND 152 (1080)
T ss_pred hh
Confidence 74
No 180
>KOG1409|consensus
Probab=98.68 E-value=1.3e-07 Score=54.19 Aligned_cols=81 Identities=19% Similarity=0.167 Sum_probs=67.8
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC-EEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD-WIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
-.++.++.+|.+.+.++.|. +....++++..|..+.+||+.-.+ ......+|...+..+..-+.-.++.+++.|+.
T Consensus 187 ~~~i~~~~~h~~~~~~l~Wd---~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~ 263 (404)
T KOG1409|consen 187 CQLITTFNGHTGEVTCLKWD---PGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGG 263 (404)
T ss_pred CceEEEEcCcccceEEEEEc---CCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCe
Confidence 34677889999999999999 677899999999999999997443 34567788888887777667778889999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
|-+||
T Consensus 264 i~~w~ 268 (404)
T KOG1409|consen 264 IVVWN 268 (404)
T ss_pred EEEEe
Confidence 99996
No 181
>KOG1188|consensus
Probab=98.68 E-value=2.3e-07 Score=53.08 Aligned_cols=83 Identities=19% Similarity=0.099 Sum_probs=60.2
Q ss_pred ccceeEEecCCCCCEEEEEEEecCC-CCcEEEEEeCCCCEEEEECCCCCEEEE---------------------------
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITE-SGYFLISACKDGKPMLRQGDTGDWIGT--------------------------- 55 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 55 (88)
.++.+..++++...+..++|.. . ....+.+++.||.|++||++.......
T Consensus 59 tg~~l~~fk~~~~~~N~vrf~~--~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~Gt 136 (376)
T KOG1188|consen 59 TGQLLEEFKGPPATTNGVRFIS--CDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGT 136 (376)
T ss_pred chhhhheecCCCCcccceEEec--CCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEecc
Confidence 3566777888888888888872 2 346788999999999998763211000
Q ss_pred ------------------------ecCCCCeEEEEEECC-CCCeEEEecCCCeEEEcC
Q psy6444 56 ------------------------FEGHKGCVWGVDINK-DASKAASGAADFQAKALK 88 (88)
Q Consensus 56 ------------------------~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~~~~ 88 (88)
...|..-|+.++|+| +...+++++.||.+.++|
T Consensus 137 E~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD 194 (376)
T KOG1188|consen 137 ELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFD 194 (376)
T ss_pred ccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeee
Confidence 024667788899998 466888999999998886
No 182
>KOG1273|consensus
Probab=98.67 E-value=1.6e-07 Score=53.46 Aligned_cols=64 Identities=23% Similarity=0.355 Sum_probs=52.7
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCC
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDAS 73 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 73 (88)
.+.+++.+|..+|.+++|+ ++|..+++++.|..+.+||+..+..+..+. ....|+...|+|..+
T Consensus 56 ~iar~lsaH~~pi~sl~WS---~dgr~LltsS~D~si~lwDl~~gs~l~rir-f~spv~~~q~hp~k~ 119 (405)
T KOG1273|consen 56 RIARMLSAHVRPITSLCWS---RDGRKLLTSSRDWSIKLWDLLKGSPLKRIR-FDSPVWGAQWHPRKR 119 (405)
T ss_pred chhhhhhccccceeEEEec---CCCCEeeeecCCceeEEEeccCCCceeEEE-ccCccceeeeccccC
Confidence 3556788999999999999 899999999999999999999888766655 345677777777543
No 183
>KOG2110|consensus
Probab=98.67 E-value=6.1e-07 Score=51.79 Aligned_cols=60 Identities=15% Similarity=0.189 Sum_probs=49.4
Q ss_pred CCCcEEEEEe-C-CCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe-EEEc
Q psy6444 28 ESGYFLISAC-K-DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ-AKAL 87 (88)
Q Consensus 28 ~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~-i~~~ 87 (88)
.+..+++..+ . .|.|.+||..+-..+..+..|++.+.+++|+++|.++++++..|+ |||+
T Consensus 139 ~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf 201 (391)
T KOG2110|consen 139 NANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVF 201 (391)
T ss_pred CCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEE
Confidence 3444555433 2 478999999988888999999999999999999999999999988 6665
No 184
>KOG0280|consensus
Probab=98.67 E-value=3.5e-07 Score=51.58 Aligned_cols=79 Identities=18% Similarity=0.107 Sum_probs=61.4
Q ss_pred eEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECC-CCCEEEE-ecCCCCeEEEEEECC-CCCeEEEecCCCeE
Q psy6444 8 PLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGD-TGDWIGT-FEGHKGCVWGVDINK-DASKAASGAADFQA 84 (88)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i 84 (88)
++..+.|.-+..-..|+. .+.+.+++|+.|+.+..||++ .+..+.. .+.|...|.++.-+| ++.++++++.|..|
T Consensus 158 vq~wk~He~E~Wta~f~~--~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i 235 (339)
T KOG0280|consen 158 VQTWKVHEFEAWTAKFSD--KEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECI 235 (339)
T ss_pred cccccccceeeeeeeccc--CCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccce
Confidence 345677887777788874 444789999999999999997 3344433 566888888887766 56788999999999
Q ss_pred EEcC
Q psy6444 85 KALK 88 (88)
Q Consensus 85 ~~~~ 88 (88)
++||
T Consensus 236 ~~~D 239 (339)
T KOG0280|consen 236 RVLD 239 (339)
T ss_pred eeee
Confidence 9997
No 185
>KOG0290|consensus
Probab=98.66 E-value=3.1e-07 Score=51.80 Aligned_cols=73 Identities=15% Similarity=0.155 Sum_probs=60.3
Q ss_pred CCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC---EEEEecCCCCeEEEEEECCCCC-eEEEecCCCeEEEcC
Q psy6444 14 HTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD---WIGTFEGHKGCVWGVDINKDAS-KAASGAADFQAKALK 88 (88)
Q Consensus 14 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~ 88 (88)
+.+++...+|+. .+-+++.+.+-|.+..+|++..+. .-.++..|.+.|..++|...+. .+++.+.||++|+||
T Consensus 149 ~~aPlTSFDWne--~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFD 225 (364)
T KOG0290|consen 149 FCAPLTSFDWNE--VDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFD 225 (364)
T ss_pred cCCccccccccc--CCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEE
Confidence 457888899984 566888899999999999998763 3456778999999999988655 667999999999987
No 186
>KOG4328|consensus
Probab=98.65 E-value=4.5e-07 Score=53.57 Aligned_cols=77 Identities=22% Similarity=0.195 Sum_probs=60.0
Q ss_pred EecCCCCCEEEEEEEecCCCC-cEEEEEeCCCCEEEEECCC----CCEEEEecCCCCeEEEEEECCC-CCeEEEecCCCe
Q psy6444 10 TCSGHTRPVVHLAFSDITESG-YFLISACKDGKPMLRQGDT----GDWIGTFEGHKGCVWGVDINKD-ASKAASGAADFQ 83 (88)
Q Consensus 10 ~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~ 83 (88)
..+-+.+++.+++|+| ... ..+++|.+.|.|-+|++.. ..-+..+..|...|.++.|+|. ...+.+.+.||+
T Consensus 181 v~kv~~~Rit~l~fHP--t~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGt 258 (498)
T KOG4328|consen 181 VAKVTDRRITSLAFHP--TENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGT 258 (498)
T ss_pred eeEecccceEEEEecc--cCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCce
Confidence 3444778999999996 444 5788888899999999952 2244566778899999999995 457789999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
||.-|
T Consensus 259 iR~~D 263 (498)
T KOG4328|consen 259 IRLQD 263 (498)
T ss_pred eeeee
Confidence 99754
No 187
>KOG1009|consensus
Probab=98.65 E-value=4.8e-08 Score=56.72 Aligned_cols=75 Identities=24% Similarity=0.322 Sum_probs=68.4
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
...+.+.+|...+..++|+ +++..+++++-|..+.+||+..+..+..+..|..-+..++|.|.++++++-+.|..
T Consensus 114 ~v~k~lr~h~~diydL~Ws---~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~ 188 (434)
T KOG1009|consen 114 VVKKVLRGHRDDIYDLAWS---PDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRH 188 (434)
T ss_pred EEEEEecccccchhhhhcc---CCCceeeeeeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcc
Confidence 4577888999999999999 79999999999999999999999999999999999999999999999988777763
No 188
>KOG2096|consensus
Probab=98.63 E-value=6.8e-07 Score=51.12 Aligned_cols=72 Identities=14% Similarity=0.243 Sum_probs=60.2
Q ss_pred CCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 13 GHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 13 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
.|...+..+... .++.++.+++.|..|++|+.. |..+..+......-...+.+|+|+++++++....+++|.
T Consensus 185 kh~v~~i~iGiA---~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE 256 (420)
T KOG2096|consen 185 KHQVDIINIGIA---GNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWE 256 (420)
T ss_pred hcccceEEEeec---CCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEE
Confidence 355667777777 677899999999999999997 888888877766666778899999999999888888883
No 189
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.61 E-value=7.3e-07 Score=53.97 Aligned_cols=70 Identities=17% Similarity=0.117 Sum_probs=56.4
Q ss_pred CCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 14 HTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 14 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
....+.+.+++ ++.++++.|+.||.+.+||...+.. ......-....++|+|+|..++.++..|.+.+||
T Consensus 258 L~s~v~~ca~s---p~E~kLvlGC~DgSiiLyD~~~~~t--~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD 327 (545)
T PF11768_consen 258 LPSQVICCARS---PSEDKLVLGCEDGSIILYDTTRGVT--LLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFD 327 (545)
T ss_pred cCCcceEEecC---cccceEEEEecCCeEEEEEcCCCee--eeeeecccceEEEEcCCCcEEEEEcCCceEEEEE
Confidence 45678888999 7999999999999999999865432 2222333457889999999999999999999987
No 190
>KOG2055|consensus
Probab=98.61 E-value=1.2e-06 Score=51.92 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=58.2
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeE--EEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCV--WGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
.+.|..+.|+ .++..++..+.+|.|.+|++....+++.+.-. +.+ ..++.++++.++++++..|.+.+||
T Consensus 344 eG~v~~~~fs---Sdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~-G~v~gts~~~S~ng~ylA~GS~~GiVNIYd 415 (514)
T KOG2055|consen 344 EGVVSDFTFS---SDSKELLASGGTGEVYVWNLRQNSCLHRFVDD-GSVHGTSLCISLNGSYLATGSDSGIVNIYD 415 (514)
T ss_pred ccEEeeEEEe---cCCcEEEEEcCCceEEEEecCCcceEEEEeec-CccceeeeeecCCCceEEeccCcceEEEec
Confidence 3678889999 89999998888999999999888777777643 334 4667789999999999999999986
No 191
>KOG2048|consensus
Probab=98.60 E-value=2.8e-06 Score=52.29 Aligned_cols=75 Identities=21% Similarity=0.226 Sum_probs=63.9
Q ss_pred eEEecCCC-CCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEE
Q psy6444 8 PLTCSGHT-RPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 8 ~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
...+.++. +.+..++|+ ++..|++.+-+|.+..||+.+.+....+....+.|+.++.+|.+..++-+|+||-+..
T Consensus 61 ~~vi~g~~drsIE~L~W~----e~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~ 136 (691)
T KOG2048|consen 61 EPVIHGPEDRSIESLAWA----EGGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYD 136 (691)
T ss_pred eEEEecCCCCceeeEEEc----cCCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEE
Confidence 34455654 559999998 5778889999999999999999999999999999999999999999988999996554
No 192
>KOG2919|consensus
Probab=98.59 E-value=6.9e-07 Score=51.10 Aligned_cols=72 Identities=21% Similarity=0.157 Sum_probs=62.9
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEec-CCCeEEEcC
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGA-ADFQAKALK 88 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~~~ 88 (88)
.+-+.+++|+| .+...++.++....+=+|.-.....+..+-+|.+.|+.++|.++|..+.++. .|-.|..||
T Consensus 207 ~giisc~a~sP--~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WD 279 (406)
T KOG2919|consen 207 KGIISCFAFSP--MDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWD 279 (406)
T ss_pred cceeeeeeccC--CCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEe
Confidence 56788999998 8888999999888888888777888888889999999999999999998765 677898987
No 193
>KOG1523|consensus
Probab=98.59 E-value=6.7e-07 Score=50.93 Aligned_cols=80 Identities=13% Similarity=0.068 Sum_probs=66.2
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCC-C--EEEEecCCCCeEEEEEECCCCCeEEEecCC
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTG-D--WIGTFEGHKGCVWGVDINKDASKAASGAAD 81 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d 81 (88)
-++..+++.|...|..++|+ +..+.+++++.|..-.+|....+ . ..-.+..+.++..++.|+|..+.++.++..
T Consensus 45 w~~~htls~Hd~~vtgvdWa---p~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSga 121 (361)
T KOG1523|consen 45 WEPAHTLSEHDKIVTGVDWA---PKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGA 121 (361)
T ss_pred ceeceehhhhCcceeEEeec---CCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCc
Confidence 35678899999999999999 78999999999999999988443 3 233445577889999999999999999888
Q ss_pred CeEEEc
Q psy6444 82 FQAKAL 87 (88)
Q Consensus 82 ~~i~~~ 87 (88)
..+-+|
T Consensus 122 r~isVc 127 (361)
T KOG1523|consen 122 RLISVC 127 (361)
T ss_pred cEEEEE
Confidence 777665
No 194
>KOG1310|consensus
Probab=98.59 E-value=2.9e-07 Score=55.77 Aligned_cols=77 Identities=16% Similarity=0.153 Sum_probs=62.4
Q ss_pred EecCCCCCEEEEEEEecCCCC-cEEEEEeCCCCEEEEECCC----------CCEEEEecCCCCeEEEEEECCCC-CeEEE
Q psy6444 10 TCSGHTRPVVHLAFSDITESG-YFLISACKDGKPMLRQGDT----------GDWIGTFEGHKGCVWGVDINKDA-SKAAS 77 (88)
Q Consensus 10 ~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~i~~~~~~~~~-~~~~~ 77 (88)
.-.||++.|.++.|-| ..+ +.++++..|+.|++||+.. ....+.+.-|..++..++-.|++ ..+++
T Consensus 88 I~TgHtaNIFsvKFvP--~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~Phtfws 165 (758)
T KOG1310|consen 88 ISTGHTANIFSVKFVP--YTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWS 165 (758)
T ss_pred eecccccceeEEeeec--cCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEE
Confidence 3457999999999987 555 5778888899999999874 12345567788889889888887 78889
Q ss_pred ecCCCeEEEcC
Q psy6444 78 GAADFQAKALK 88 (88)
Q Consensus 78 ~~~d~~i~~~~ 88 (88)
+++||++|.+|
T Consensus 166 asEDGtirQyD 176 (758)
T KOG1310|consen 166 ASEDGTIRQYD 176 (758)
T ss_pred ecCCcceeeec
Confidence 99999999876
No 195
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.58 E-value=3e-06 Score=47.38 Aligned_cols=80 Identities=14% Similarity=0.115 Sum_probs=57.3
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEE-EEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEE-EecCC
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFL-ISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAA-SGAAD 81 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d 81 (88)
.++.+..+..+. .+..++|+ ++++.+ +++..++.+.+|+..+++.+..+..+.. +..+.++|++..++ ++..+
T Consensus 20 t~~~~~~~~~~~-~~~~l~~~---~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~ 94 (300)
T TIGR03866 20 TLEVTRTFPVGQ-RPRGITLS---KDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELFALHPNGKILYIANEDD 94 (300)
T ss_pred CCceEEEEECCC-CCCceEEC---CCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEEEECCCCCEEEEEcCCC
Confidence 345666666553 35678899 688765 5667788999999988777666654433 45678999998765 44568
Q ss_pred CeEEEcC
Q psy6444 82 FQAKALK 88 (88)
Q Consensus 82 ~~i~~~~ 88 (88)
+.+++||
T Consensus 95 ~~l~~~d 101 (300)
T TIGR03866 95 NLVTVID 101 (300)
T ss_pred CeEEEEE
Confidence 8999986
No 196
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.58 E-value=4.4e-06 Score=47.74 Aligned_cols=80 Identities=34% Similarity=0.412 Sum_probs=64.3
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCc-EEEEEeCCCCEEEEECCCCCEEE-EecCCCCeEEEEEECCCCCeEEEecCCC
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGY-FLISACKDGKPMLRQGDTGDWIG-TFEGHKGCVWGVDINKDASKAASGAADF 82 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~d~ 82 (88)
+..+..+.+|...+.+++|+ +++. .+++++.++.+.+|+...+..+. .+.+|.... ...|++++..+++++.|+
T Consensus 188 ~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~ 263 (466)
T COG2319 188 GKPLSTLAGHTDPVSSLAFS---PDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDG 263 (466)
T ss_pred CceEEeeccCCCceEEEEEc---CCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCC
Confidence 35667778899999999999 6777 55555899999999887677766 577777664 337899988888999999
Q ss_pred eEEEcC
Q psy6444 83 QAKALK 88 (88)
Q Consensus 83 ~i~~~~ 88 (88)
.+++|+
T Consensus 264 ~~~~~~ 269 (466)
T COG2319 264 TIRLWD 269 (466)
T ss_pred cEEEee
Confidence 999986
No 197
>KOG4714|consensus
Probab=98.57 E-value=5.2e-08 Score=54.08 Aligned_cols=70 Identities=14% Similarity=0.155 Sum_probs=58.9
Q ss_pred CEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC-EEEEecCCCCeEEEEEECC-CCCeEEEecCCCeEEEcC
Q psy6444 17 PVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD-WIGTFEGHKGCVWGVDINK-DASKAASGAADFQAKALK 88 (88)
Q Consensus 17 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~~~~ 88 (88)
.|.+++-+| .+...+++|+.+|.+-+||.++.. ....++.|+..++.+-|+| ++..+++++.||.+..||
T Consensus 181 ~v~~l~~hp--~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wd 252 (319)
T KOG4714|consen 181 AVTALCSHP--AQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWD 252 (319)
T ss_pred cchhhhCCc--ccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEc
Confidence 377888886 677888899999999999998765 3355678999999999999 577899999999999986
No 198
>KOG4227|consensus
Probab=98.54 E-value=4.8e-07 Score=53.05 Aligned_cols=77 Identities=21% Similarity=0.192 Sum_probs=62.3
Q ss_pred EEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCC------CCEEEEecC-CCCeEEEEEECCCCCeEEEecCC
Q psy6444 9 LTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDT------GDWIGTFEG-HKGCVWGVDINKDASKAASGAAD 81 (88)
Q Consensus 9 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~d 81 (88)
+-+.+|++-|.++.|+ .++++|++|+.|-.+.+|.+.. .+.+..... |...|.+++|......+.++..+
T Consensus 50 KD~~~H~GCiNAlqFS---~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~ 126 (609)
T KOG4227|consen 50 KDVREHTGCINALQFS---HNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERW 126 (609)
T ss_pred hhhhhhccccceeeec---cCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCc
Confidence 3456799999999999 8999999999999999998752 244444433 56889999999988899999999
Q ss_pred CeEEEcC
Q psy6444 82 FQAKALK 88 (88)
Q Consensus 82 ~~i~~~~ 88 (88)
+++...|
T Consensus 127 ~~VI~HD 133 (609)
T KOG4227|consen 127 GTVIKHD 133 (609)
T ss_pred ceeEeee
Confidence 8876653
No 199
>KOG1524|consensus
Probab=98.52 E-value=4.8e-07 Score=54.73 Aligned_cols=73 Identities=18% Similarity=0.241 Sum_probs=52.7
Q ss_pred eEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecC-----------------------------
Q psy6444 8 PLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEG----------------------------- 58 (88)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------- 58 (88)
+...+.|.+-|.+++|+ +..+.+++++.|-..++||.. |..++....
T Consensus 179 ~i~WkAHDGiiL~~~W~---~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd~~~~v~S~nt~R~~~p 254 (737)
T KOG1524|consen 179 IIRWRAHDGLVLSLSWS---TQSNIIASGGEDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNPEKDYLLWSYNTARFSSP 254 (737)
T ss_pred eeEEeccCcEEEEeecC---ccccceeecCCceeEEeeccc-CcccccCChhccceeeeeeccccceeeeeeeeeeecCC
Confidence 33457899999999999 799999999999999999875 333333222
Q ss_pred CCCeEEEEEECCCCCeEEEecCCCeE
Q psy6444 59 HKGCVWGVDINKDASKAASGAADFQA 84 (88)
Q Consensus 59 ~~~~i~~~~~~~~~~~~~~~~~d~~i 84 (88)
..+.|..++|++||.++++++..|.+
T Consensus 255 ~~GSifnlsWS~DGTQ~a~gt~~G~v 280 (737)
T KOG1524|consen 255 RVGSIFNLSWSADGTQATCGTSTGQL 280 (737)
T ss_pred CccceEEEEEcCCCceeeccccCceE
Confidence 34566666777777766666655554
No 200
>KOG3914|consensus
Probab=98.52 E-value=4e-07 Score=52.80 Aligned_cols=76 Identities=22% Similarity=0.224 Sum_probs=60.7
Q ss_pred EEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEE-ecCCCCeEEEEEECCCCCeEEEecCCCeEEEc
Q psy6444 9 LTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGT-FEGHKGCVWGVDINKDASKAASGAADFQAKAL 87 (88)
Q Consensus 9 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 87 (88)
...-||-..+.+++++ ++.++++++..|..|++=.++....+.. +.||+.-|..++.-+ ++.+++++.|+++++|
T Consensus 145 ~~~lGhvSml~dVavS---~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~-~~~LlS~sGD~tlr~W 220 (390)
T KOG3914|consen 145 EPILGHVSMLLDVAVS---PDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTD-NYLLLSGSGDKTLRLW 220 (390)
T ss_pred chhhhhhhhhheeeec---CCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeecc-CceeeecCCCCcEEEE
Confidence 3456788889999999 7999999999999999866654444433 467888888888765 4558899999999999
Q ss_pred C
Q psy6444 88 K 88 (88)
Q Consensus 88 ~ 88 (88)
|
T Consensus 221 d 221 (390)
T KOG3914|consen 221 D 221 (390)
T ss_pred e
Confidence 7
No 201
>KOG1240|consensus
Probab=98.51 E-value=1.9e-06 Score=56.22 Aligned_cols=82 Identities=18% Similarity=0.130 Sum_probs=63.8
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCC-------CEEEEecCCCCeEEEEEECCCCCeEE
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTG-------DWIGTFEGHKGCVWGVDINKDASKAA 76 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~~ 76 (88)
.|..+..+..|...+..++.++ +.+.++++++.||.|++|+...- +....+......+..+.+.+.+.+++
T Consensus 1037 ~G~lVAhL~Ehs~~v~k~a~s~--~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~A 1114 (1431)
T KOG1240|consen 1037 RGILVAHLHEHSSAVIKLAVSS--EHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFA 1114 (1431)
T ss_pred cceEeehhhhccccccceeecC--CCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEE
Confidence 4566777888888888888885 66699999999999999987531 12223333456778888888999999
Q ss_pred EecCCCeEEEc
Q psy6444 77 SGAADFQAKAL 87 (88)
Q Consensus 77 ~~~~d~~i~~~ 87 (88)
.++.||.+++.
T Consensus 1115 v~t~DG~v~~~ 1125 (1431)
T KOG1240|consen 1115 VSTKDGSVRVL 1125 (1431)
T ss_pred EEcCCCeEEEE
Confidence 99999999875
No 202
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.51 E-value=1.5e-06 Score=33.45 Aligned_cols=37 Identities=30% Similarity=0.326 Sum_probs=31.6
Q ss_pred EEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 52 WIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 52 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
.+..+..+...+.++.|.+.+..+++++.|+.+++|+
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 4 LLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 3455567778899999999889999999999999997
No 203
>KOG1272|consensus
Probab=98.51 E-value=3.1e-07 Score=54.45 Aligned_cols=79 Identities=13% Similarity=0.087 Sum_probs=57.4
Q ss_pred CccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCC
Q psy6444 3 SIRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADF 82 (88)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~ 82 (88)
....++..+.+|.++|.++++. ++|.++++.+.|..+++||+++-..+..+.. .-....+++|..+.+.++ ...
T Consensus 281 ~skePLvKiLcH~g~V~siAv~---~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~SqkglLA~~--~G~ 354 (545)
T KOG1272|consen 281 NSKEPLVKILCHRGPVSSIAVD---RGGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQKGLLALS--YGD 354 (545)
T ss_pred CCcchHHHHHhcCCCcceEEEC---CCCcEEeecccccceeEeeeccccccceeec-CCCccccccccccceeee--cCC
Confidence 3455677788899999999999 7999999999999999999987665555544 233455677766654433 333
Q ss_pred eEEEc
Q psy6444 83 QAKAL 87 (88)
Q Consensus 83 ~i~~~ 87 (88)
.+.+|
T Consensus 355 ~v~iw 359 (545)
T KOG1272|consen 355 HVQIW 359 (545)
T ss_pred eeeee
Confidence 45555
No 204
>KOG0649|consensus
Probab=98.50 E-value=5.2e-06 Score=46.14 Aligned_cols=79 Identities=15% Similarity=0.121 Sum_probs=55.6
Q ss_pred CccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCC----------CeEEEEEECCCC
Q psy6444 3 SIRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHK----------GCVWGVDINKDA 72 (88)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~i~~~~~~~~~ 72 (88)
.+++..+.++||+..+.++.-- .....+++++.||.+++||..+++.+..+...+ +.|-+ +..+.
T Consensus 144 E~G~i~r~~rGHtDYvH~vv~R---~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wiga--la~~e 218 (325)
T KOG0649|consen 144 EDGRIQREYRGHTDYVHSVVGR---NANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGA--LAVNE 218 (325)
T ss_pred cCCEEEEEEcCCcceeeeeeec---ccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEE--EeccC
Confidence 3678889999999999999874 345578899999999999999988777664332 22333 33445
Q ss_pred CeEEEecCCCeEEEc
Q psy6444 73 SKAASGAADFQAKAL 87 (88)
Q Consensus 73 ~~~~~~~~d~~i~~~ 87 (88)
.++++++. ..+.+|
T Consensus 219 dWlvCGgG-p~lslw 232 (325)
T KOG0649|consen 219 DWLVCGGG-PKLSLW 232 (325)
T ss_pred ceEEecCC-CceeEE
Confidence 57766543 344444
No 205
>KOG1007|consensus
Probab=98.44 E-value=6.5e-07 Score=50.56 Aligned_cols=72 Identities=14% Similarity=0.102 Sum_probs=51.2
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEe-cCCCCeEEEEEECCCCCeE-EEecCCCeEEEcC
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTF-EGHKGCVWGVDINKDASKA-ASGAADFQAKALK 88 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~-~~~~~d~~i~~~~ 88 (88)
+.....-+|+|- .++..+ ....++.+..||+++-.....+ ..|...+..++|+|+.+++ ++++.|+.+++||
T Consensus 170 ~~~ftsg~WspH-Hdgnqv-~tt~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD 243 (370)
T KOG1007|consen 170 RHSFTSGAWSPH-HDGNQV-ATTSDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWD 243 (370)
T ss_pred cceecccccCCC-CccceE-EEeCCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEe
Confidence 344555667741 234444 4555789999999865554444 3578889999999987655 5888999999997
No 206
>KOG1523|consensus
Probab=98.44 E-value=1.5e-06 Score=49.53 Aligned_cols=79 Identities=11% Similarity=0.133 Sum_probs=61.3
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC--EEEEe--cCCCCeEEEEEECCCCCeEEEecCC
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD--WIGTF--EGHKGCVWGVDINKDASKAASGAAD 81 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~d 81 (88)
++...+..+.+.+.++.|+ +.++.++.++....+.+|-+.... .+.+. +.....|.+++|+|++-+++.++.|
T Consensus 91 kptlvLlRiNrAAt~V~Ws---P~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D 167 (361)
T KOG1523|consen 91 KPTLVLLRINRAATCVKWS---PKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTD 167 (361)
T ss_pred ccceeEEEeccceeeEeec---CcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccC
Confidence 4556677788999999999 789999999988877776554322 33222 2245778999999999999999999
Q ss_pred CeEEEc
Q psy6444 82 FQAKAL 87 (88)
Q Consensus 82 ~~i~~~ 87 (88)
+.+|++
T Consensus 168 ~k~rVf 173 (361)
T KOG1523|consen 168 GKCRVF 173 (361)
T ss_pred cceeEE
Confidence 999986
No 207
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.44 E-value=5.9e-06 Score=49.29 Aligned_cols=78 Identities=17% Similarity=0.189 Sum_probs=53.6
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCC---CCEEEEECCCCCE--EEEecCCCCeEEEEEECCCCCeEEEe
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKD---GKPMLRQGDTGDW--IGTFEGHKGCVWGVDINKDASKAASG 78 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~ 78 (88)
++...+.+..|...+..+.|+ ++|+.++..+.+ ..+.+|++.++.. +..+.++ ...++|+|+++.++.+
T Consensus 192 dg~~~~~lt~~~~~v~~p~wS---PDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wSPDG~~La~~ 265 (429)
T PRK01742 192 DGFNQFIVNRSSQPLMSPAWS---PDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFSPDGSRLAFA 265 (429)
T ss_pred CCCCceEeccCCCccccceEc---CCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeECCCCCEEEEE
Confidence 344455667777889999999 799888876643 3588999876653 2333333 3457999999988764
Q ss_pred -cCCCeEEEc
Q psy6444 79 -AADFQAKAL 87 (88)
Q Consensus 79 -~~d~~i~~~ 87 (88)
..++...+|
T Consensus 266 ~~~~g~~~Iy 275 (429)
T PRK01742 266 SSKDGVLNIY 275 (429)
T ss_pred EecCCcEEEE
Confidence 467765554
No 208
>KOG4378|consensus
Probab=98.41 E-value=3.7e-06 Score=50.66 Aligned_cols=79 Identities=11% Similarity=0.074 Sum_probs=63.9
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCC-CCeEEEEEECCCCCeEE-EecCCCeE
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGH-KGCVWGVDINKDASKAA-SGAADFQA 84 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~-~~~~d~~i 84 (88)
..+.+++|+..|.++.|+ -..+++++++..|.|.+..+.++.....+.-. ...++.+++++-.+.++ +++.+|.+
T Consensus 113 ~hr~lkdh~stvt~v~YN---~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~V 189 (673)
T KOG4378|consen 113 IHRFLKDHQSTVTYVDYN---NTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAV 189 (673)
T ss_pred HhhhccCCcceeEEEEec---CCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeE
Confidence 456788999999999998 67789999999999999988776655555433 45567889999777555 78899999
Q ss_pred EEcC
Q psy6444 85 KALK 88 (88)
Q Consensus 85 ~~~~ 88 (88)
.+||
T Consensus 190 tlwD 193 (673)
T KOG4378|consen 190 TLWD 193 (673)
T ss_pred EEEe
Confidence 9997
No 209
>KOG4227|consensus
Probab=98.39 E-value=7.1e-06 Score=48.36 Aligned_cols=80 Identities=15% Similarity=0.098 Sum_probs=65.6
Q ss_pred ceeEEecC-CCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecC--CCCeEEEEEECCCCCeEEEecCCC
Q psy6444 6 QIPLTCSG-HTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEG--HKGCVWGVDINKDASKAASGAADF 82 (88)
Q Consensus 6 ~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~d~ 82 (88)
+++..... |...+.|+.|. ....++++|..++.+...|+.+...+..+.. ..+.|.++..+|....+++.+.++
T Consensus 95 KPI~~~~~~H~SNIF~L~F~---~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~ 171 (609)
T KOG4227|consen 95 KPIGVMEHPHRSNIFSLEFD---LENRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAK 171 (609)
T ss_pred CCceeccCccccceEEEEEc---cCCeeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCc
Confidence 55555555 45789999998 7778999999999999999987776655543 456899999999988999999999
Q ss_pred eEEEcC
Q psy6444 83 QAKALK 88 (88)
Q Consensus 83 ~i~~~~ 88 (88)
.+.+||
T Consensus 172 ~V~~~D 177 (609)
T KOG4227|consen 172 LVSFID 177 (609)
T ss_pred eEEEEe
Confidence 999997
No 210
>KOG2111|consensus
Probab=98.38 E-value=6e-06 Score=47.12 Aligned_cols=55 Identities=11% Similarity=0.104 Sum_probs=45.0
Q ss_pred EEEeCCCCEEEEECCCCCE--EEEecCCCCeEEEEEECCCCCeEEEecCCCe-EEEcC
Q psy6444 34 ISACKDGKPMLRQGDTGDW--IGTFEGHKGCVWGVDINKDASKAASGAADFQ-AKALK 88 (88)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~-i~~~~ 88 (88)
+.+.+-|.+.+-++..... ...+..|.+.|.+++++.+|..+++++..|+ ||+||
T Consensus 153 fPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFd 210 (346)
T KOG2111|consen 153 FPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFD 210 (346)
T ss_pred cCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEE
Confidence 3566678898888764443 4677889999999999999999999998887 88886
No 211
>KOG1188|consensus
Probab=98.37 E-value=1.8e-06 Score=49.57 Aligned_cols=58 Identities=17% Similarity=0.196 Sum_probs=49.5
Q ss_pred cEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECC--CCCeEEEecCCCeEEEcC
Q psy6444 31 YFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINK--DASKAASGAADFQAKALK 88 (88)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~d~~i~~~~ 88 (88)
..++.+..++.+++|+..++..+..++++...+..++|.- ....+.+++.||+|++||
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD 100 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWD 100 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEE
Confidence 3477788889999999998888999999888888888765 466778999999999997
No 212
>KOG4378|consensus
Probab=98.36 E-value=2.2e-06 Score=51.56 Aligned_cols=76 Identities=14% Similarity=0.112 Sum_probs=61.2
Q ss_pred EecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 10 TCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 10 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
..+.|..+...++|+| .+...+++.+.|+.|.+||.........+. .......++|.++|.+++.+...|.+..||
T Consensus 203 ~~~~HsAP~~gicfsp--sne~l~vsVG~Dkki~~yD~~s~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s~G~~i~YD 278 (673)
T KOG4378|consen 203 ASEAHSAPCRGICFSP--SNEALLVSVGYDKKINIYDIRSQASTDRLT-YSHPLSTVAFSECGTYLCAGNSKGELIAYD 278 (673)
T ss_pred hhhhccCCcCcceecC--CccceEEEecccceEEEeecccccccceee-ecCCcceeeecCCceEEEeecCCceEEEEe
Confidence 3455888889999997 777889999999999999997555444443 345667899999999999999999988776
No 213
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.32 E-value=4.3e-06 Score=32.06 Aligned_cols=39 Identities=41% Similarity=0.575 Sum_probs=33.1
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEE
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQ 46 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 46 (88)
.++...+..|...+.++.|. +.+..+++++.++.+.+|+
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFS---PDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEEC---CCCCEEEEecCCCeEEEcC
Confidence 35667778899999999999 6778999999999999885
No 214
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.32 E-value=4.1e-05 Score=45.11 Aligned_cols=81 Identities=19% Similarity=0.230 Sum_probs=55.6
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEec-CCC
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGA-ADF 82 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~ 82 (88)
+.+.+..+......-..+.++ ++|++++..+.|+.+.++|+.+.+.+..+... .....++++++|++++.++ .++
T Consensus 25 t~~~~~~i~~~~~~h~~~~~s---~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G-~~~~~i~~s~DG~~~~v~n~~~~ 100 (369)
T PF02239_consen 25 TNKVVARIPTGGAPHAGLKFS---PDGRYLYVANRDGTVSVIDLATGKVVATIKVG-GNPRGIAVSPDGKYVYVANYEPG 100 (369)
T ss_dssp T-SEEEEEE-STTEEEEEE-T---T-SSEEEEEETTSEEEEEETTSSSEEEEEE-S-SEEEEEEE--TTTEEEEEEEETT
T ss_pred CCeEEEEEcCCCCceeEEEec---CCCCEEEEEcCCCeEEEEECCcccEEEEEecC-CCcceEEEcCCCCEEEEEecCCC
Confidence 345566666543333345677 79999999999999999999999988888754 4567899999999998665 667
Q ss_pred eEEEcC
Q psy6444 83 QAKALK 88 (88)
Q Consensus 83 ~i~~~~ 88 (88)
.+.++|
T Consensus 101 ~v~v~D 106 (369)
T PF02239_consen 101 TVSVID 106 (369)
T ss_dssp EEEEEE
T ss_pred ceeEec
Confidence 777764
No 215
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.31 E-value=2.2e-05 Score=46.91 Aligned_cols=76 Identities=13% Similarity=0.017 Sum_probs=54.2
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeC---CCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEE-Eec
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACK---DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAA-SGA 79 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~ 79 (88)
++...+.+..+...+..++|+ ++|+.++..+. +..+.+|++..+.. ..+....+.+...+|+|++..++ +.+
T Consensus 190 dg~~~~~lt~~~~~v~~p~wS---pDG~~lay~s~~~g~~~i~~~dl~~g~~-~~l~~~~g~~~~~~~SPDG~~la~~~~ 265 (435)
T PRK05137 190 DGANVRYLTDGSSLVLTPRFS---PNRQEITYMSYANGRPRVYLLDLETGQR-ELVGNFPGMTFAPRFSPDGRKVVMSLS 265 (435)
T ss_pred CCCCcEEEecCCCCeEeeEEC---CCCCEEEEEEecCCCCEEEEEECCCCcE-EEeecCCCcccCcEECCCCCEEEEEEe
Confidence 344556677788889999999 79988877653 35688999976654 34444555667889999999775 555
Q ss_pred CCCe
Q psy6444 80 ADFQ 83 (88)
Q Consensus 80 ~d~~ 83 (88)
.++.
T Consensus 266 ~~g~ 269 (435)
T PRK05137 266 QGGN 269 (435)
T ss_pred cCCC
Confidence 5554
No 216
>KOG1587|consensus
Probab=98.31 E-value=3.5e-06 Score=51.67 Aligned_cols=78 Identities=14% Similarity=0.003 Sum_probs=60.9
Q ss_pred eEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECC-CCCEEEEecCCCCeEEEEEECCCCC-eEEEecCCCeEE
Q psy6444 8 PLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGD-TGDWIGTFEGHKGCVWGVDINKDAS-KAASGAADFQAK 85 (88)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~ 85 (88)
...+..|-++|..+.++| .-...+.+++ |-.+++|.-. ....+..+..+...+..++|||... .++++..||.+.
T Consensus 391 ~~~~~~h~g~v~~v~~nP--F~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~ 467 (555)
T KOG1587|consen 391 HSTFITHIGPVYAVSRNP--FYPKNFLSVG-DWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLD 467 (555)
T ss_pred cccccccCcceEeeecCC--Cccceeeeec-cceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCcee
Confidence 345566889999999996 5555566666 8899999876 5566777777777899999999654 667888899999
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
+||
T Consensus 468 iWD 470 (555)
T KOG1587|consen 468 IWD 470 (555)
T ss_pred hhh
Confidence 998
No 217
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.31 E-value=9.1e-06 Score=45.47 Aligned_cols=57 Identities=16% Similarity=0.107 Sum_probs=45.9
Q ss_pred cEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeE-EEecCCCeEEEcC
Q psy6444 31 YFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKA-ASGAADFQAKALK 88 (88)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~~i~~~~ 88 (88)
..+++++.++.+.+|+..++..+..+..+. .+..+.|+|++..+ +++..++.+++||
T Consensus 2 ~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d 59 (300)
T TIGR03866 2 KAYVSNEKDNTISVIDTATLEVTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVID 59 (300)
T ss_pred cEEEEecCCCEEEEEECCCCceEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEE
Confidence 467888999999999998888777777553 35678999999866 5667888999986
No 218
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.30 E-value=2.4e-05 Score=46.72 Aligned_cols=80 Identities=16% Similarity=0.092 Sum_probs=54.5
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCC---CCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEE-Eec
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKD---GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAA-SGA 79 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~ 79 (88)
++...+.+..+...+...+|+ ++|+.++..+.. ..+.+|++..+... .+....+.....+|+|++..++ +.+
T Consensus 184 dG~~~~~l~~~~~~v~~p~wS---PDG~~la~~s~~~~~~~I~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~la~~~~ 259 (427)
T PRK02889 184 DGQNAQSALSSPEPIISPAWS---PDGTKLAYVSFESKKPVVYVHDLATGRRR-VVANFKGSNSAPAWSPDGRTLAVALS 259 (427)
T ss_pred CCCCceEeccCCCCcccceEc---CCCCEEEEEEccCCCcEEEEEECCCCCEE-EeecCCCCccceEECCCCCEEEEEEc
Confidence 344445556677788899999 799888766543 34888999877643 3333334556789999999876 566
Q ss_pred CCCeEEEc
Q psy6444 80 ADFQAKAL 87 (88)
Q Consensus 80 ~d~~i~~~ 87 (88)
.++...+|
T Consensus 260 ~~g~~~Iy 267 (427)
T PRK02889 260 RDGNSQIY 267 (427)
T ss_pred cCCCceEE
Confidence 67665554
No 219
>KOG2321|consensus
Probab=98.26 E-value=9.3e-06 Score=49.67 Aligned_cols=81 Identities=14% Similarity=0.156 Sum_probs=61.9
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEec------CC-----CCeEEEEEECCCCC
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFE------GH-----KGCVWGVDINKDAS 73 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-----~~~i~~~~~~~~~~ 73 (88)
|.-+..+....+.+.++..+ +...++++|+.+|.+.+||.+.......+. .+ ...|.++.|+-+|-
T Consensus 165 GrfL~P~~~~~~~lN~v~in---~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL 241 (703)
T KOG2321|consen 165 GRFLNPFETDSGELNVVSIN---EEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGL 241 (703)
T ss_pred cccccccccccccceeeeec---CccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCce
Confidence 33445555556788899998 788899999999999999987654433332 12 23489999999999
Q ss_pred eEEEecCCCeEEEcC
Q psy6444 74 KAASGAADFQAKALK 88 (88)
Q Consensus 74 ~~~~~~~d~~i~~~~ 88 (88)
.++.+..+|.+.++|
T Consensus 242 ~~aVGts~G~v~iyD 256 (703)
T KOG2321|consen 242 HVAVGTSTGSVLIYD 256 (703)
T ss_pred eEEeeccCCcEEEEE
Confidence 999999999998886
No 220
>KOG1587|consensus
Probab=98.23 E-value=4e-05 Score=47.22 Aligned_cols=80 Identities=18% Similarity=0.073 Sum_probs=60.8
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCE--E----EEecCCCCeEEEEEECCCCCe--EEE
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDW--I----GTFEGHKGCVWGVDINKDASK--AAS 77 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~i~~~~~~~~~~~--~~~ 77 (88)
.+...+. ....|.++.|+| .+...++.|..+|.|.+||...+.. . .....|...+..+.|..+..- +++
T Consensus 234 ~Pe~~~~-~~s~v~~~~f~p--~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s 310 (555)
T KOG1587|consen 234 TPELVLE-SPSEVTCLKFCP--FDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFS 310 (555)
T ss_pred CceEEEe-cCCceeEEEecc--CCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEE
Confidence 3444444 357899999998 8889999999999999999976543 1 122347788888888775554 888
Q ss_pred ecCCCeEEEcC
Q psy6444 78 GAADFQAKALK 88 (88)
Q Consensus 78 ~~~d~~i~~~~ 88 (88)
++.||.|..|+
T Consensus 311 ~ssDG~i~~W~ 321 (555)
T KOG1587|consen 311 LSSDGSICSWD 321 (555)
T ss_pred EecCCcEeeee
Confidence 88999999884
No 221
>KOG2106|consensus
Probab=98.22 E-value=6e-05 Score=45.71 Aligned_cols=67 Identities=18% Similarity=0.188 Sum_probs=44.4
Q ss_pred CCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEc
Q psy6444 16 RPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKAL 87 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 87 (88)
.++.|.+|+ +.| .++.+...|.-.+.|..+...+..-. ....+..++|+|+|..++.+++|+.|.+|
T Consensus 408 d~~~~~~fh---psg-~va~Gt~~G~w~V~d~e~~~lv~~~~-d~~~ls~v~ysp~G~~lAvgs~d~~iyiy 474 (626)
T KOG2106|consen 408 DPAECADFH---PSG-VVAVGTATGRWFVLDTETQDLVTIHT-DNEQLSVVRYSPDGAFLAVGSHDNHIYIY 474 (626)
T ss_pred CceeEeecc---Ccc-eEEEeeccceEEEEecccceeEEEEe-cCCceEEEEEcCCCCEEEEecCCCeEEEE
Confidence 344555555 344 55555555555555554433222222 36788999999999999999999999876
No 222
>KOG1963|consensus
Probab=98.19 E-value=2.4e-05 Score=49.41 Aligned_cols=69 Identities=23% Similarity=0.263 Sum_probs=58.9
Q ss_pred CCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEE
Q psy6444 14 HTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 14 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
|...|.++.|+ ++|..+++|+..+.+.+|...++. -.-+..-.+.|..+.++||+...+....|..|-+
T Consensus 250 H~~~V~~L~fS---~~G~~LlSGG~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~l 318 (792)
T KOG1963|consen 250 HHDEVNSLSFS---SDGAYLLSGGREGVLVLWQLETGK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHL 318 (792)
T ss_pred cccccceeEEe---cCCceEeecccceEEEEEeecCCC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEE
Confidence 77899999999 899999999999999999998777 2344455678899999999999988888887654
No 223
>KOG1963|consensus
Probab=98.17 E-value=2e-05 Score=49.74 Aligned_cols=72 Identities=17% Similarity=0.166 Sum_probs=60.4
Q ss_pred CCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCC----CCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 14 HTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDT----GDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 14 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
|+-.+.+.+++ ++++.++++..+|.|.+|.--. ......+.+|-..|.++.|+++|.++.+|+..+-+-+|.
T Consensus 204 Htf~~t~~~~s---pn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq 279 (792)
T KOG1963|consen 204 HTFNITCVALS---PNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQ 279 (792)
T ss_pred hcccceeEEec---cccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEe
Confidence 55667889999 7999999999999999995322 124466788889999999999999999999999888884
No 224
>KOG4190|consensus
Probab=98.16 E-value=2.5e-06 Score=52.21 Aligned_cols=78 Identities=21% Similarity=0.139 Sum_probs=61.9
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCC-------CEEEEecCCCCeEEEEEECCCCCeEEEe
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTG-------DWIGTFEGHKGCVWGVDINKDASKAASG 78 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 78 (88)
..+..+.||+..|..+..- .+.+-++++++|+++++|.+... .+...+..|+..|..+.|-.+.+.+++
T Consensus 726 irL~nf~GH~~~iRai~Ai---dNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S- 801 (1034)
T KOG4190|consen 726 IRLCNFTGHQEKIRAIAAI---DNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS- 801 (1034)
T ss_pred eeeecccCcHHHhHHHHhc---ccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeee-
Confidence 3567788999998888765 67889999999999999988632 245667789999999988887777764
Q ss_pred cCCCeEEEcC
Q psy6444 79 AADFQAKALK 88 (88)
Q Consensus 79 ~~d~~i~~~~ 88 (88)
-|+-+.+||
T Consensus 802 -cD~giHlWD 810 (1034)
T KOG4190|consen 802 -CDGGIHLWD 810 (1034)
T ss_pred -ccCcceeec
Confidence 467788887
No 225
>KOG1334|consensus
Probab=98.15 E-value=1.9e-06 Score=51.52 Aligned_cols=77 Identities=21% Similarity=0.292 Sum_probs=64.1
Q ss_pred EecCCCCC--EEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEc
Q psy6444 10 TCSGHTRP--VVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKAL 87 (88)
Q Consensus 10 ~~~~~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 87 (88)
.++||+.. |-.+-|-- |..+++++|+.-|.|.||+-.++..++.+.+...-|.++.-+|.-..+++++-|..|+||
T Consensus 386 vYKGHrN~~TVKgVNFfG--PrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIW 463 (559)
T KOG1334|consen 386 VYKGHRNSRTVKGVNFFG--PRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIW 463 (559)
T ss_pred hhcccccccccceeeecc--CccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeee
Confidence 37888753 44554432 677899999999999999999888888899887788999989988899999999999999
Q ss_pred C
Q psy6444 88 K 88 (88)
Q Consensus 88 ~ 88 (88)
-
T Consensus 464 T 464 (559)
T KOG1334|consen 464 T 464 (559)
T ss_pred c
Confidence 3
No 226
>KOG0322|consensus
Probab=98.14 E-value=4.5e-06 Score=46.75 Aligned_cols=80 Identities=10% Similarity=-0.041 Sum_probs=62.7
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEec-CCCCeEEEEEECCCCCeEEEecCCC
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFE-GHKGCVWGVDINKDASKAASGAADF 82 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~d~ 82 (88)
...|...|+.|.+.+.++.|. +++ .+.++...|.+.+|.+++.+....+. .+...|..+..-|+ ..+.+.+.|.
T Consensus 3 pPdP~fvLRp~~~~v~s~~fq---a~~-rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~ 77 (323)
T KOG0322|consen 3 PPDPFFVLRPHSSSVTSVLFQ---ANE-RLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDP 77 (323)
T ss_pred CCCCeeEeccccchheehhhc---cch-hhhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCc
Confidence 456778889999999999997 444 58999999999999998877666666 35567777776665 4566778888
Q ss_pred eEEEcC
Q psy6444 83 QAKALK 88 (88)
Q Consensus 83 ~i~~~~ 88 (88)
++.+|+
T Consensus 78 ~L~lw~ 83 (323)
T KOG0322|consen 78 LLILWT 83 (323)
T ss_pred eEEEEE
Confidence 888874
No 227
>KOG0771|consensus
Probab=98.13 E-value=3.6e-05 Score=45.20 Aligned_cols=68 Identities=26% Similarity=0.349 Sum_probs=56.2
Q ss_pred CCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEe-cCCCCeEEEEEECCCCCeEEEecCCCeEEE
Q psy6444 16 RPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTF-EGHKGCVWGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
..+.+++.+ .+|++++-++.+|.|.+++..+-..+... ..|...|+.+.|+|+.+.+++.+.+.+..+
T Consensus 282 ~siSsl~VS---~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v 350 (398)
T KOG0771|consen 282 KSISSLAVS---DDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAV 350 (398)
T ss_pred CcceeEEEc---CCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeE
Confidence 468888888 89999999999999999998765554444 358889999999999999988877776554
No 228
>KOG1517|consensus
Probab=98.12 E-value=3.9e-05 Score=50.07 Aligned_cols=83 Identities=24% Similarity=0.245 Sum_probs=61.9
Q ss_pred CCccceeEEecCCCCC--EEEEEEEecCCCC-cEEEEEeCCCCEEEEECCCCCEE--EEecCC--CC-eEEEEEECCCCC
Q psy6444 2 ASIRQIPLTCSGHTRP--VVHLAFSDITESG-YFLISACKDGKPMLRQGDTGDWI--GTFEGH--KG-CVWGVDINKDAS 73 (88)
Q Consensus 2 ~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~-~i~~~~~~~~~~ 73 (88)
+.....+...+.|... |..+.+. .+| ..+++++.+|.|.+||++....+ .....+ .+ ..+++..+++..
T Consensus 1241 a~~ds~v~~~R~h~~~~~Iv~~slq---~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hap 1317 (1387)
T KOG1517|consen 1241 APPDSLVCVYREHNDVEPIVHLSLQ---RQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAP 1317 (1387)
T ss_pred CCccccceeecccCCcccceeEEee---cCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCC
Confidence 3344567778888877 9999998 556 56999999999999999864322 222222 13 588899999999
Q ss_pred eEEEecCCCeEEEcC
Q psy6444 74 KAASGAADFQAKALK 88 (88)
Q Consensus 74 ~~~~~~~d~~i~~~~ 88 (88)
.+++++. +.|.+|+
T Consensus 1318 iiAsGs~-q~ikIy~ 1331 (1387)
T KOG1517|consen 1318 IIASGSA-QLIKIYS 1331 (1387)
T ss_pred eeeecCc-ceEEEEe
Confidence 9998887 8899985
No 229
>KOG2055|consensus
Probab=98.08 E-value=6.4e-05 Score=45.00 Aligned_cols=71 Identities=11% Similarity=0.047 Sum_probs=57.5
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCC--CCEEEEecCCCCeEEEEEECCCCC-eEEEecCCCeEEEcC
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQGDT--GDWIGTFEGHKGCVWGVDINKDAS-KAASGAADFQAKALK 88 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~ 88 (88)
.+.+.++.|+ +..+.+..++.|+.+.+|.++- ...+..+.-..-.|....|.|+|. .+++++....+..||
T Consensus 213 ~~~I~sv~FH---p~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyD 286 (514)
T KOG2055|consen 213 HGGITSVQFH---PTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYD 286 (514)
T ss_pred cCCceEEEec---CCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEee
Confidence 4679999999 7889999999999999998863 234555555567888889999999 777888877788876
No 230
>KOG4547|consensus
Probab=98.07 E-value=5e-05 Score=46.23 Aligned_cols=71 Identities=18% Similarity=0.048 Sum_probs=61.4
Q ss_pred CCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 13 GHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 13 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
+|-+.|.++.++ .+-..+.+++.|..+..|+......++.+......+..++.+||+..+++++ ++|.+||
T Consensus 100 ~h~~~v~~~~~~---~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as--~~ik~~~ 170 (541)
T KOG4547|consen 100 KHYGNVNEILDA---QRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTAS--RQIKVLD 170 (541)
T ss_pred CCCCcceeeecc---cccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEecc--ceEEEEE
Confidence 488899999988 6778999999999999999998888888998888999999999988887765 4677664
No 231
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.03 E-value=9.2e-05 Score=44.34 Aligned_cols=80 Identities=16% Similarity=0.136 Sum_probs=52.2
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCC---CCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEE-EecC
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKD---GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAA-SGAA 80 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~ 80 (88)
+...+.+..+...+..++|+ ++|+.++..+.. ..+.+|++..+... .+....+.....+|+|++..++ +.+.
T Consensus 193 g~~~~~lt~~~~~v~~p~wS---pDg~~la~~s~~~~~~~l~~~dl~~g~~~-~l~~~~g~~~~~~~SpDG~~l~~~~s~ 268 (433)
T PRK04922 193 GYNPQTILRSAEPILSPAWS---PDGKKLAYVSFERGRSAIYVQDLATGQRE-LVASFRGINGAPSFSPDGRRLALTLSR 268 (433)
T ss_pred CCCceEeecCCCccccccCC---CCCCEEEEEecCCCCcEEEEEECCCCCEE-EeccCCCCccCceECCCCCEEEEEEeC
Confidence 34445566667778899999 799888876643 35888898766542 3333334445679999999775 4444
Q ss_pred CC--eEEEcC
Q psy6444 81 DF--QAKALK 88 (88)
Q Consensus 81 d~--~i~~~~ 88 (88)
++ .|.+||
T Consensus 269 ~g~~~Iy~~d 278 (433)
T PRK04922 269 DGNPEIYVMD 278 (433)
T ss_pred CCCceEEEEE
Confidence 44 466554
No 232
>KOG0974|consensus
Probab=97.96 E-value=9.4e-05 Score=47.73 Aligned_cols=61 Identities=15% Similarity=0.205 Sum_probs=51.1
Q ss_pred CCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 28 ESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
++.-.+++++..+.+.+|...-......+.+|.+.|..+.++-+|+++++.+.|.++|+|+
T Consensus 143 ~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~ 203 (967)
T KOG0974|consen 143 AEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWP 203 (967)
T ss_pred CcEEEEEeccccccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeee
Confidence 5566788888889999998762222235889999999999999999999999999999995
No 233
>KOG1645|consensus
Probab=97.96 E-value=3.2e-05 Score=45.60 Aligned_cols=78 Identities=15% Similarity=0.115 Sum_probs=62.0
Q ss_pred eEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEE-EecCCCeEEE
Q psy6444 8 PLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAA-SGAADFQAKA 86 (88)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d~~i~~ 86 (88)
...+.++...+..++|+| .+..++..++.+..+++.|+.+...+..+..+ +.+++.+|..+...++ .+-..|.+.+
T Consensus 186 sq~lp~~g~~IrdlafSp--~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~Vlv 262 (463)
T KOG1645|consen 186 SQILPGEGSFIRDLAFSP--FNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLV 262 (463)
T ss_pred hhcccccchhhhhhccCc--cccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEE
Confidence 445566777899999996 66668889999999999999988877777766 8899999988766555 5557788888
Q ss_pred cC
Q psy6444 87 LK 88 (88)
Q Consensus 87 ~~ 88 (88)
+|
T Consensus 263 yD 264 (463)
T KOG1645|consen 263 YD 264 (463)
T ss_pred EE
Confidence 76
No 234
>PRK00178 tolB translocation protein TolB; Provisional
Probab=97.90 E-value=0.00047 Score=41.23 Aligned_cols=80 Identities=16% Similarity=0.111 Sum_probs=50.5
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCC---CCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEE-Eec
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKD---GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAA-SGA 79 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~ 79 (88)
++...+.+..+...+....|+ ++|+.++..+.+ ..+.+|++.++.. ..+....+......|+|++..++ +..
T Consensus 187 ~g~~~~~l~~~~~~~~~p~wS---pDG~~la~~s~~~~~~~l~~~~l~~g~~-~~l~~~~g~~~~~~~SpDG~~la~~~~ 262 (430)
T PRK00178 187 DGARAVTLLQSREPILSPRWS---PDGKRIAYVSFEQKRPRIFVQNLDTGRR-EQITNFEGLNGAPAWSPDGSKLAFVLS 262 (430)
T ss_pred CCCCceEEecCCCceeeeeEC---CCCCEEEEEEcCCCCCEEEEEECCCCCE-EEccCCCCCcCCeEECCCCCEEEEEEc
Confidence 344445555666778899999 799887765543 2477788876654 22332333445679999999776 444
Q ss_pred CCC--eEEEc
Q psy6444 80 ADF--QAKAL 87 (88)
Q Consensus 80 ~d~--~i~~~ 87 (88)
.++ .|.++
T Consensus 263 ~~g~~~Iy~~ 272 (430)
T PRK00178 263 KDGNPEIYVM 272 (430)
T ss_pred cCCCceEEEE
Confidence 444 35444
No 235
>PRK03629 tolB translocation protein TolB; Provisional
Probab=97.88 E-value=0.00053 Score=41.19 Aligned_cols=80 Identities=13% Similarity=0.027 Sum_probs=50.1
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeC---CCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEE-ecC
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACK---DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAAS-GAA 80 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~ 80 (88)
+...+.+..+...+...+|+ ++|+.++..+. +..+.++++..+.. ..+....+......|+|++..++. ...
T Consensus 188 g~~~~~lt~~~~~~~~p~wS---PDG~~la~~s~~~g~~~i~i~dl~~G~~-~~l~~~~~~~~~~~~SPDG~~La~~~~~ 263 (429)
T PRK03629 188 GYNQFVVHRSPQPLMSPAWS---PDGSKLAYVTFESGRSALVIQTLANGAV-RQVASFPRHNGAPAFSPDGSKLAFALSK 263 (429)
T ss_pred CCCCEEeecCCCceeeeEEc---CCCCEEEEEEecCCCcEEEEEECCCCCe-EEccCCCCCcCCeEECCCCCEEEEEEcC
Confidence 33344455566788999999 79988876542 34578888876653 222222233445799999998874 344
Q ss_pred CC--eEEEcC
Q psy6444 81 DF--QAKALK 88 (88)
Q Consensus 81 d~--~i~~~~ 88 (88)
++ .|.+||
T Consensus 264 ~g~~~I~~~d 273 (429)
T PRK03629 264 TGSLNLYVMD 273 (429)
T ss_pred CCCcEEEEEE
Confidence 44 355553
No 236
>KOG4497|consensus
Probab=97.81 E-value=0.00026 Score=41.18 Aligned_cols=68 Identities=12% Similarity=0.208 Sum_probs=54.2
Q ss_pred CEEEEEEEecCCCCcEEE-EEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEE-EecCCCeEEEc
Q psy6444 17 PVVHLAFSDITESGYFLI-SACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAA-SGAADFQAKAL 87 (88)
Q Consensus 17 ~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d~~i~~~ 87 (88)
.|.-+.|. .+...++ ...+++.+.+|++...+.-.++......+..++|+|+|+.++ +...+-+|.+|
T Consensus 50 ki~yieW~---ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVW 119 (447)
T KOG4497|consen 50 KIVYIEWK---ADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVW 119 (447)
T ss_pred Hhhheeee---ccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEE
Confidence 45567787 7776544 567788999999987777788887778889999999998776 56688889888
No 237
>KOG2041|consensus
Probab=97.81 E-value=6.2e-05 Score=47.66 Aligned_cols=74 Identities=20% Similarity=0.219 Sum_probs=59.8
Q ss_pred eEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEec--CCCCeEEEEEECCCCCeEEEecCCCeE
Q psy6444 8 PLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFE--GHKGCVWGVDINKDASKAASGAADFQA 84 (88)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~d~~i 84 (88)
-+++.||.+.|..+.|+ .+.+.+-+...+|.|.+|-+.++.+...+. ..++-|.+++|+.+|..+.-.-.||.+
T Consensus 64 NQtLeGH~~sV~vvTWN---e~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGav 139 (1189)
T KOG2041|consen 64 NQTLEGHNASVMVVTWN---ENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAV 139 (1189)
T ss_pred hhhhccCcceEEEEEec---cccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCE
Confidence 45789999999999999 788999999999999999988877554443 245677899999999987666666654
No 238
>KOG4640|consensus
Probab=97.80 E-value=0.00027 Score=43.88 Aligned_cols=69 Identities=10% Similarity=0.037 Sum_probs=56.2
Q ss_pred CCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEE-EEEECCCCCeEEEecCCCeEEEcC
Q psy6444 16 RPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVW-GVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
..+-.+.|+ |..+.++.+..+|.+.++.+. -.++-.+.-+...+. +.+|.|||..++.+-.||+|++.|
T Consensus 21 ~~i~~~ewn---P~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~D 90 (665)
T KOG4640|consen 21 INIKRIEWN---PKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHD 90 (665)
T ss_pred cceEEEEEc---CccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEE
Confidence 346678899 788999999999999988886 445666665554454 999999999999999999999876
No 239
>KOG2139|consensus
Probab=97.80 E-value=0.00083 Score=39.56 Aligned_cols=64 Identities=17% Similarity=-0.046 Sum_probs=46.5
Q ss_pred CCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC-EEEEecCCCCeEEEEEECCCCCeEE-EecCC
Q psy6444 14 HTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD-WIGTFEGHKGCVWGVDINKDASKAA-SGAAD 81 (88)
Q Consensus 14 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d 81 (88)
..+.+..+.|+ |++.+++++..|...++|...... .+...- ..+.|..-.|+|+|+.++ +++..
T Consensus 237 glgg~slLkwS---Pdgd~lfaAt~davfrlw~e~q~wt~erw~l-gsgrvqtacWspcGsfLLf~~sgs 302 (445)
T KOG2139|consen 237 GLGGFSLLKWS---PDGDVLFAATCDAVFRLWQENQSWTKERWIL-GSGRVQTACWSPCGSFLLFACSGS 302 (445)
T ss_pred CCCceeeEEEc---CCCCEEEEecccceeeeehhcccceecceec-cCCceeeeeecCCCCEEEEEEcCC
Confidence 45678889999 799999999999999999654332 222222 234888889999999765 44433
No 240
>PRK01742 tolB translocation protein TolB; Provisional
Probab=97.77 E-value=0.00042 Score=41.56 Aligned_cols=66 Identities=18% Similarity=0.080 Sum_probs=44.4
Q ss_pred EEEEEEEecCCCCcEEEEEe-CCCCEEEE--ECCCCCEEEEecCCCCeEEEEEECCCCCeEEE-ecCCCeEEEc
Q psy6444 18 VVHLAFSDITESGYFLISAC-KDGKPMLR--QGDTGDWIGTFEGHKGCVWGVDINKDASKAAS-GAADFQAKAL 87 (88)
Q Consensus 18 v~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d~~i~~~ 87 (88)
...++|+ ++|+.++.+. .++...+| +...+. +..+..+...+....|+|++..++. +..++...+|
T Consensus 250 ~~~~~wS---PDG~~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~ 319 (429)
T PRK01742 250 NGAPAFS---PDGSRLAFASSKDGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVY 319 (429)
T ss_pred cCceeEC---CCCCEEEEEEecCCcEEEEEEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEE
Confidence 3467899 7998777654 67766655 554444 4455555566778899999997764 4456666665
No 241
>KOG4547|consensus
Probab=97.76 E-value=0.00056 Score=41.93 Aligned_cols=68 Identities=21% Similarity=0.179 Sum_probs=55.0
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCC-----CCeEEE
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKD-----ASKAAS 77 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~ 77 (88)
....+..++.+..+..+..+ ++|..+++++ +.+++|++.+.+.+..|.+|.+.|..+.|.-. |.++++
T Consensus 134 ~~~~~~~~~~~~~~~sl~is---~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLs 206 (541)
T KOG4547|consen 134 KVIIRIWKEQKPLVSSLCIS---PDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLS 206 (541)
T ss_pred ceeeeeeccCCCccceEEEc---CCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeee
Confidence 34455666667778889999 7898998887 67999999999999999999999999888665 555554
No 242
>KOG1064|consensus
Probab=97.76 E-value=3.2e-05 Score=52.84 Aligned_cols=64 Identities=19% Similarity=0.239 Sum_probs=50.9
Q ss_pred cCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 12 SGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 12 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
++|.+.+.++++. |..+.+++|+++|.+++||++....++.++. +. ...++.+++..|.+++|.
T Consensus 2333 ~~H~~gaT~l~~~---P~~qllisggr~G~v~l~D~rqrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~ 2396 (2439)
T KOG1064|consen 2333 TCHDGGATVLAYA---PKHQLLISGGRKGEVCLFDIRQRQLRHTFQA---------LD-TREYFVTGSSEGNIKIWR 2396 (2439)
T ss_pred eecCCCceEEEEc---CcceEEEecCCcCcEEEeehHHHHHHHHhhh---------hh-hhheeeccCcccceEEEE
Confidence 6799999999999 7899999999999999999986665555554 22 345667777778888874
No 243
>KOG1832|consensus
Probab=97.69 E-value=0.00026 Score=46.08 Aligned_cols=70 Identities=17% Similarity=0.128 Sum_probs=62.2
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEec
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGA 79 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 79 (88)
+.+++..|+....|++|+ ...++++.|+..|.+++|++.+|........|...++.+.-+.+|..+++.+
T Consensus 1093 ~w~~frd~~~~fTc~afs---~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltss 1162 (1516)
T KOG1832|consen 1093 SWRSFRDETALFTCIAFS---GGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSS 1162 (1516)
T ss_pred cchhhhccccceeeEEee---cCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeec
Confidence 456778888999999999 7889999999999999999999998889999999999999999999877544
No 244
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=97.68 E-value=0.0011 Score=39.39 Aligned_cols=78 Identities=21% Similarity=0.162 Sum_probs=50.5
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCC---CCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEE-EecCC
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKD---GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAA-SGAAD 81 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d 81 (88)
...+.+..+...+...+|+ ++|+.++..... ..+.+|++.++... .+....+......|+|++..++ +...+
T Consensus 180 ~~~~~l~~~~~~~~~p~~S---pdg~~la~~~~~~~~~~i~v~d~~~g~~~-~~~~~~~~~~~~~~spDg~~l~~~~~~~ 255 (417)
T TIGR02800 180 ANPQTITRSREPILSPAWS---PDGQKLAYVSFESGKPEIYVQDLATGQRE-KVASFPGMNGAPAFSPDGSKLAVSLSKD 255 (417)
T ss_pred CCCEEeecCCCceecccCC---CCCCEEEEEEcCCCCcEEEEEECCCCCEE-EeecCCCCccceEECCCCCEEEEEECCC
Confidence 3344555566678888999 799888876543 36888998776542 2333444556689999998775 44444
Q ss_pred C--eEEEc
Q psy6444 82 F--QAKAL 87 (88)
Q Consensus 82 ~--~i~~~ 87 (88)
+ .+.+|
T Consensus 256 ~~~~i~~~ 263 (417)
T TIGR02800 256 GNPDIYVM 263 (417)
T ss_pred CCccEEEE
Confidence 3 35554
No 245
>KOG2315|consensus
Probab=97.66 E-value=0.0013 Score=40.40 Aligned_cols=67 Identities=13% Similarity=0.088 Sum_probs=48.0
Q ss_pred CCEEEEEEEecCCCCcEEEEEeC---CCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCC------CeEEE
Q psy6444 16 RPVVHLAFSDITESGYFLISACK---DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAAD------FQAKA 86 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d------~~i~~ 86 (88)
++=.++-|+ +.|+.++-++- .|.+.+||+.+.+.+..+..... .-..|+|+|++++++... +.+++
T Consensus 312 gpRN~~~fn---p~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~t--t~~eW~PdGe~flTATTaPRlrvdNg~Ki 386 (566)
T KOG2315|consen 312 GPRNTAFFN---PHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAANT--TVFEWSPDGEYFLTATTAPRLRVDNGIKI 386 (566)
T ss_pred CCccceEEC---CCCCEEEEeecCCCCCceEEEeccchhhccccccCCc--eEEEEcCCCcEEEEEeccccEEecCCeEE
Confidence 444457788 68887776655 36899999998777777765433 345899999999987644 45555
Q ss_pred c
Q psy6444 87 L 87 (88)
Q Consensus 87 ~ 87 (88)
|
T Consensus 387 w 387 (566)
T KOG2315|consen 387 W 387 (566)
T ss_pred E
Confidence 5
No 246
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=97.64 E-value=0.0045 Score=37.96 Aligned_cols=70 Identities=11% Similarity=-0.034 Sum_probs=55.9
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEec
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGA 79 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 79 (88)
.++.....-+.+.++..+ ++|..++.+.....+.+.|+.++.....-+...+.|....|+|++++++-+-
T Consensus 393 e~kr~e~~lg~I~av~vs---~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYaf 462 (668)
T COG4946 393 EVKRIEKDLGNIEAVKVS---PDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAF 462 (668)
T ss_pred eEEEeeCCccceEEEEEc---CCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEec
Confidence 344555666888999999 7999999888877888889998886555566778999999999999998543
No 247
>KOG1334|consensus
Probab=97.64 E-value=0.00012 Score=44.27 Aligned_cols=75 Identities=17% Similarity=0.114 Sum_probs=58.3
Q ss_pred EEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEE-ecCCCCeEEEEEECCC--CCeEEEecCCCeEE
Q psy6444 9 LTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGT-FEGHKGCVWGVDINKD--ASKAASGAADFQAK 85 (88)
Q Consensus 9 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~--~~~~~~~~~d~~i~ 85 (88)
..|..|.+-|..+.|+ ..|..+++++.|..+.+|+-..+..... ..+|...+.--.|-|. -+.+++++.|+.++
T Consensus 136 ~kL~~H~GcVntV~FN---~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr 212 (559)
T KOG1334|consen 136 KKLNKHKGCVNTVHFN---QRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVR 212 (559)
T ss_pred hcccCCCCccceeeec---ccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCcee
Confidence 4577899999999999 8999999999999999999766654433 4567776665566663 44677888888877
Q ss_pred E
Q psy6444 86 A 86 (88)
Q Consensus 86 ~ 86 (88)
+
T Consensus 213 ~ 213 (559)
T KOG1334|consen 213 V 213 (559)
T ss_pred e
Confidence 5
No 248
>PRK04792 tolB translocation protein TolB; Provisional
Probab=97.63 E-value=0.0013 Score=39.85 Aligned_cols=71 Identities=17% Similarity=0.042 Sum_probs=44.4
Q ss_pred EEecCCCCCEEEEEEEecCCCCcEEEEEeC-CC--CEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEE-EecCCCe
Q psy6444 9 LTCSGHTRPVVHLAFSDITESGYFLISACK-DG--KPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAA-SGAADFQ 83 (88)
Q Consensus 9 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d~~ 83 (88)
+.+..+...+....|+ ++|+.++..+. ++ .+.++++..+... .+....+......|+|++..++ +...++.
T Consensus 211 ~~l~~~~~~~~~p~wS---PDG~~La~~s~~~g~~~L~~~dl~tg~~~-~lt~~~g~~~~~~wSPDG~~La~~~~~~g~ 285 (448)
T PRK04792 211 QMLLRSPEPLMSPAWS---PDGRKLAYVSFENRKAEIFVQDIYTQVRE-KVTSFPGINGAPRFSPDGKKLALVLSKDGQ 285 (448)
T ss_pred eEeecCCCcccCceEC---CCCCEEEEEEecCCCcEEEEEECCCCCeE-EecCCCCCcCCeeECCCCCEEEEEEeCCCC
Confidence 3444455667789999 79988776543 33 4777788766532 2222223334678999999776 4455554
No 249
>KOG1517|consensus
Probab=97.61 E-value=0.0013 Score=43.57 Aligned_cols=61 Identities=13% Similarity=0.242 Sum_probs=49.6
Q ss_pred CCCcEEEEEeCCCCEEEEECCCCC---EEEEecCCCCe--EEEEEECCCCCe-EEEecCCCeEEEcC
Q psy6444 28 ESGYFLISACKDGKPMLRQGDTGD---WIGTFEGHKGC--VWGVDINKDASK-AASGAADFQAKALK 88 (88)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--i~~~~~~~~~~~-~~~~~~d~~i~~~~ 88 (88)
..|+.++.|..||.+++||.+... .+.....|... |.++.+.+.|.. +++++.+|.|++||
T Consensus 1219 ~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~D 1285 (1387)
T KOG1517|consen 1219 VHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLD 1285 (1387)
T ss_pred cCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEe
Confidence 457899999999999999986432 45666667666 889999887665 88999999999997
No 250
>PRK02889 tolB translocation protein TolB; Provisional
Probab=97.54 E-value=0.0015 Score=39.28 Aligned_cols=77 Identities=12% Similarity=-0.053 Sum_probs=44.5
Q ss_pred eEEecCCCCCEEEEEEEecCCCCcEEEEEeC-CCCEEEEEC--CCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCC--
Q psy6444 8 PLTCSGHTRPVVHLAFSDITESGYFLISACK-DGKPMLRQG--DTGDWIGTFEGHKGCVWGVDINKDASKAASGAADF-- 82 (88)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~-- 82 (88)
...+..+.+......|+ ++|+.++..+. ++...+|.+ ..+.. ..+...........|+|++++++..+.++
T Consensus 276 ~~~lt~~~~~~~~~~wS---pDG~~l~f~s~~~g~~~Iy~~~~~~g~~-~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~ 351 (427)
T PRK02889 276 LRRLTQSSGIDTEPFFS---PDGRSIYFTSDRGGAPQIYRMPASGGAA-QRVTFTGSYNTSPRISPDGKLLAYISRVGGA 351 (427)
T ss_pred cEECCCCCCCCcCeEEc---CCCCEEEEEecCCCCcEEEEEECCCCce-EEEecCCCCcCceEECCCCCEEEEEEccCCc
Confidence 34444455555677899 79987776554 456666654 33332 22222222334578999999987554332
Q ss_pred -eEEEcC
Q psy6444 83 -QAKALK 88 (88)
Q Consensus 83 -~i~~~~ 88 (88)
.|.+||
T Consensus 352 ~~I~v~d 358 (427)
T PRK02889 352 FKLYVQD 358 (427)
T ss_pred EEEEEEE
Confidence 466654
No 251
>KOG2695|consensus
Probab=97.51 E-value=0.0005 Score=40.20 Aligned_cols=73 Identities=18% Similarity=0.151 Sum_probs=52.0
Q ss_pred CCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCE---EEEecCCCCeEEEE--EECCCCCeEEEecCCCeEEEcC
Q psy6444 14 HTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDW---IGTFEGHKGCVWGV--DINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 14 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~--~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
|...|.++..-. .+++.+.+.+-+|.|.+||.+-.++ +..+.+|.+...-+ ...+....+++++.|.-.|+|.
T Consensus 297 h~Ssvtslq~Lq--~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWs 374 (425)
T KOG2695|consen 297 HDSSVTSLQILQ--FSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWS 374 (425)
T ss_pred cCcchhhhhhhc--cccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEe
Confidence 556666655432 3577888888899999999875554 88888886654322 3345555777899999999993
No 252
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=97.47 E-value=0.0025 Score=36.82 Aligned_cols=69 Identities=6% Similarity=-0.086 Sum_probs=45.4
Q ss_pred CEEEEEEEecCCCCcEEEE-EeCCCCEEEEECCCCCEEEE-----ec-CCCCeEEEEEECCCCCeEEEecC-CCeEEEcC
Q psy6444 17 PVVHLAFSDITESGYFLIS-ACKDGKPMLRQGDTGDWIGT-----FE-GHKGCVWGVDINKDASKAASGAA-DFQAKALK 88 (88)
Q Consensus 17 ~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~i~~~~~~~~~~~~~~~~~-d~~i~~~~ 88 (88)
....+.++ ++++.++. ...++.+.+|++.....+.. .. ........+.|+|++.++.++.. ++++.+|+
T Consensus 127 ~~~~~~~~---p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~ 203 (330)
T PRK11028 127 GCHSANID---PDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQ 203 (330)
T ss_pred cccEeEeC---CCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEE
Confidence 34567788 68877754 44568899999875322211 11 11234567899999998876654 78888875
No 253
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=97.46 E-value=0.0014 Score=37.92 Aligned_cols=64 Identities=8% Similarity=0.090 Sum_probs=43.5
Q ss_pred EEEEEecCCCCcEEEEEeC-CCCEEEEECCCCC----EEEEecCCCCeEEEEEECCCCCeEEEec-CCCeEEEc
Q psy6444 20 HLAFSDITESGYFLISACK-DGKPMLRQGDTGD----WIGTFEGHKGCVWGVDINKDASKAASGA-ADFQAKAL 87 (88)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~~ 87 (88)
.+.++ +++++++.+.. ++.+.+|++.... .+..... ......+.++|++.+++++. .++.+.+|
T Consensus 232 ~i~~~---pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~-~~~p~~~~~~~dg~~l~va~~~~~~v~v~ 301 (330)
T PRK11028 232 DIHIT---PDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPT-ETQPRGFNIDHSGKYLIAAGQKSHHISVY 301 (330)
T ss_pred eEEEC---CCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEec-cccCCceEECCCCCEEEEEEccCCcEEEE
Confidence 57788 78988887754 5789999885432 1222221 12445789999999888655 57888887
No 254
>KOG0309|consensus
Probab=97.39 E-value=0.00088 Score=42.84 Aligned_cols=83 Identities=11% Similarity=0.076 Sum_probs=60.9
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC-EEEEecCCCCeEEEEEECCCCCeEEEecCCC
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD-WIGTFEGHKGCVWGVDINKDASKAASGAADF 82 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~ 82 (88)
+...-..+-+|...+..+-|+| .....+++++-|..+..|+.++.. .+..+..-.....-++|+.....+...++..
T Consensus 103 ~~aIef~lhghsraitd~n~~~--q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~ 180 (1081)
T KOG0309|consen 103 SNAIEFVLHGHSRAITDINFNP--QHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGN 180 (1081)
T ss_pred ccceEEEEecCccceeccccCC--CCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCC
Confidence 4556778889999999999996 556789999999999999997654 3333333334456678877655555566777
Q ss_pred eEEEcC
Q psy6444 83 QAKALK 88 (88)
Q Consensus 83 ~i~~~~ 88 (88)
.+++||
T Consensus 181 ~i~vwd 186 (1081)
T KOG0309|consen 181 DIFVWD 186 (1081)
T ss_pred ceEEEe
Confidence 788886
No 255
>KOG1064|consensus
Probab=97.36 E-value=0.0009 Score=46.43 Aligned_cols=78 Identities=12% Similarity=0.057 Sum_probs=59.8
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEe---CCCCEEEEECCCC--C-EEEEecCCCCeEEEEEECCCCCeEEE
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISAC---KDGKPMLRQGDTG--D-WIGTFEGHKGCVWGVDINKDASKAAS 77 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~-~~~~~~~~~~~i~~~~~~~~~~~~~~ 77 (88)
..++....++|.....+++|- . ..+++++ .++.+.+||.... . .+. ..|.+.++.+++.|+.+.+++
T Consensus 2281 ~pk~~~s~qchnk~~~Df~Fi---~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~P~~qllis 2353 (2439)
T KOG1064|consen 2281 SPKPYTSWQCHNKALSDFRFI---G--SLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYAPKHQLLIS 2353 (2439)
T ss_pred CCcceeccccCCccccceeee---e--hhhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEEcCcceEEEe
Confidence 356777778888888888886 3 4555443 3567999986422 2 333 778899999999999999999
Q ss_pred ecCCCeEEEcC
Q psy6444 78 GAADFQAKALK 88 (88)
Q Consensus 78 ~~~d~~i~~~~ 88 (88)
++.+|.+.+||
T Consensus 2354 ggr~G~v~l~D 2364 (2439)
T KOG1064|consen 2354 GGRKGEVCLFD 2364 (2439)
T ss_pred cCCcCcEEEee
Confidence 99999999997
No 256
>KOG2321|consensus
Probab=97.34 E-value=0.0015 Score=40.63 Aligned_cols=66 Identities=17% Similarity=0.188 Sum_probs=51.3
Q ss_pred EEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 20 HLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
++.++. + ..-++.++....+.-+++..|+.+..+....+.++.+..++.+.++++++.++.+..||
T Consensus 138 Dm~y~~--~-scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwD 203 (703)
T KOG2321|consen 138 DMKYHK--P-SCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWD 203 (703)
T ss_pred cccccC--C-CccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEec
Confidence 445552 3 33344455455677778888998888888889999999999999999999999999997
No 257
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.27 E-value=0.0026 Score=26.64 Aligned_cols=31 Identities=10% Similarity=0.199 Sum_probs=27.6
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECC
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQGD 48 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 48 (88)
...|.+++|+ |..+.++.+..+|.+.++.+.
T Consensus 11 ~~~v~~~~w~---P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 11 PSRVSCMSWC---PTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCcEEEEEEC---CCCCEEEEEECCCeEEEEECC
Confidence 3568999999 799999999999999999983
No 258
>KOG1409|consensus
Probab=97.25 E-value=0.0055 Score=36.04 Aligned_cols=78 Identities=24% Similarity=0.277 Sum_probs=55.5
Q ss_pred eEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCC-------------------------------------
Q psy6444 8 PLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTG------------------------------------- 50 (88)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------- 50 (88)
++....|..++..+.|+ ...+++++.+.|+.+.---...+
T Consensus 107 ~r~~~~h~~~v~~~if~---~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~ 183 (404)
T KOG1409|consen 107 LKDYLAHQARVSAIVFS---LTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYAFVGDHSGQITMLKLE 183 (404)
T ss_pred hhhhhhhhcceeeEEec---CCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEEEecccccceEEEEEe
Confidence 34455678888888888 67778888777765432111110
Q ss_pred ----CEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 51 ----DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 51 ----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
..+..+.+|.+.+.+..|.+....+.++..|.++.+||
T Consensus 184 ~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wd 225 (404)
T KOG1409|consen 184 QNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWD 225 (404)
T ss_pred ecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEe
Confidence 12234467889999999999888999999999999996
No 259
>KOG2695|consensus
Probab=97.25 E-value=0.00025 Score=41.43 Aligned_cols=70 Identities=17% Similarity=0.258 Sum_probs=52.7
Q ss_pred CCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCC----CEEEEecCCCCeEEEEEECC-CCCeEEEecCCCeEEEcC
Q psy6444 16 RPVVHLAFSDITESGYFLISACKDGKPMLRQGDTG----DWIGTFEGHKGCVWGVDINK-DASKAASGAADFQAKALK 88 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~~~~ 88 (88)
+.|.++.|+ ..++.++.|+.+|.|...|++.+ .+-...-.|...++++..-. .++++.+.+.+++|++||
T Consensus 253 sDVfAlQf~---~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD 327 (425)
T KOG2695|consen 253 SDVFALQFA---GSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYD 327 (425)
T ss_pred hhHHHHHhc---ccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhccccceEeeccCcCceeEee
Confidence 557778887 66889999999999999998754 22233345778888775433 566777888999999997
No 260
>KOG4532|consensus
Probab=97.22 E-value=0.0092 Score=34.18 Aligned_cols=68 Identities=10% Similarity=-0.032 Sum_probs=51.7
Q ss_pred EEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC--EEEEec-CCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 18 VVHLAFSDITESGYFLISACKDGKPMLRQGDTGD--WIGTFE-GHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 18 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
+..+.++ +++.++++.+....+.+|.++... .+.... .....-....|+....+++.+.-|+++.+||
T Consensus 161 ~ns~~~s---nd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~D 231 (344)
T KOG4532|consen 161 QNSLHYS---NDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYD 231 (344)
T ss_pred eeeeEEc---CCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEE
Confidence 4566777 799999999999999999887543 223222 2334446678999999999999999999997
No 261
>PRK03629 tolB translocation protein TolB; Provisional
Probab=97.22 E-value=0.01 Score=35.88 Aligned_cols=67 Identities=9% Similarity=0.014 Sum_probs=41.3
Q ss_pred EEecCCCCCEEEEEEEecCCCCcEEEEEeCC-CCEEEE--ECCCCCEEEEecCCCCeEEEEEECCCCCeEEEec
Q psy6444 9 LTCSGHTRPVVHLAFSDITESGYFLISACKD-GKPMLR--QGDTGDWIGTFEGHKGCVWGVDINKDASKAASGA 79 (88)
Q Consensus 9 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 79 (88)
..+..+...+....|+ ++|+.++..+.+ +...+| +...+.. ..+...........|+|++.+++..+
T Consensus 280 ~~lt~~~~~~~~~~wS---PDG~~I~f~s~~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~SpDG~~Ia~~~ 349 (429)
T PRK03629 280 RQVTDGRSNNTEPTWF---PDSQNLAYTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVS 349 (429)
T ss_pred EEccCCCCCcCceEEC---CCCCEEEEEeCCCCCceEEEEECCCCCe-EEeecCCCCccCEEECCCCCEEEEEE
Confidence 3344444566788999 799877766553 444555 5554433 33333334455678999999887544
No 262
>PRK05137 tolB translocation protein TolB; Provisional
Probab=97.18 E-value=0.01 Score=35.80 Aligned_cols=68 Identities=9% Similarity=-0.017 Sum_probs=43.2
Q ss_pred eEEecCCCCCEEEEEEEecCCCCcEEEEEeC-CC--CEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEec
Q psy6444 8 PLTCSGHTRPVVHLAFSDITESGYFLISACK-DG--KPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGA 79 (88)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 79 (88)
...+..+........|+ ++|+.++..+. ++ .+.+++...+. ...+....+......|+|++..++...
T Consensus 282 ~~~Lt~~~~~~~~~~~s---pDG~~i~f~s~~~g~~~Iy~~d~~g~~-~~~lt~~~~~~~~~~~SpdG~~ia~~~ 352 (435)
T PRK05137 282 TTRLTDSPAIDTSPSYS---PDGSQIVFESDRSGSPQLYVMNADGSN-PRRISFGGGRYSTPVWSPRGDLIAFTK 352 (435)
T ss_pred eEEccCCCCccCceeEc---CCCCEEEEEECCCCCCeEEEEECCCCC-eEEeecCCCcccCeEECCCCCEEEEEE
Confidence 34455555556678899 78987776553 33 46666765444 333433344456678999999887544
No 263
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.16 E-value=0.012 Score=33.60 Aligned_cols=60 Identities=15% Similarity=0.082 Sum_probs=41.8
Q ss_pred CCCcEEEEEeCCCCEEEEECCCCC--EEEEecCCC---CeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 28 ESGYFLISACKDGKPMLRQGDTGD--WIGTFEGHK---GCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
.+|+.++ ...|..+.+....... .+.+.+..+ .+=+.++|+||+..++.+...|+|+++|
T Consensus 7 ~~Gk~lA-i~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfd 71 (282)
T PF15492_consen 7 SDGKLLA-ILQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFD 71 (282)
T ss_pred CCCcEEE-EEeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEe
Confidence 5665555 5567788888765432 334443322 3336789999999999999999999986
No 264
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=97.15 E-value=0.018 Score=34.27 Aligned_cols=74 Identities=11% Similarity=0.039 Sum_probs=44.3
Q ss_pred EecCCCCCEEEEEEEecCCCCcEEEEEeC-CC--CEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCC---e
Q psy6444 10 TCSGHTRPVVHLAFSDITESGYFLISACK-DG--KPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADF---Q 83 (88)
Q Consensus 10 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~---~ 83 (88)
.+..+........|+ ++|+.++..+. .+ .+.+++...+.. ..+...........|+|++.+++....+. .
T Consensus 272 ~l~~~~~~~~~~~~s---~dg~~l~~~s~~~g~~~iy~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~ 347 (417)
T TIGR02800 272 RLTNGPGIDTEPSWS---PDGKSIAFTSDRGGSPQIYMMDADGGEV-RRLTFRGGYNASPSWSPDGDLIAFVHREGGGFN 347 (417)
T ss_pred ECCCCCCCCCCEEEC---CCCCEEEEEECCCCCceEEEEECCCCCE-EEeecCCCCccCeEECCCCCEEEEEEccCCceE
Confidence 333444444567888 78887765544 33 355667665443 33443445566778999999887665543 4
Q ss_pred EEEc
Q psy6444 84 AKAL 87 (88)
Q Consensus 84 i~~~ 87 (88)
+.++
T Consensus 348 i~~~ 351 (417)
T TIGR02800 348 IAVM 351 (417)
T ss_pred EEEE
Confidence 4444
No 265
>PRK04922 tolB translocation protein TolB; Provisional
Probab=97.14 E-value=0.0093 Score=36.00 Aligned_cols=76 Identities=9% Similarity=0.023 Sum_probs=43.7
Q ss_pred EEecCCCCCEEEEEEEecCCCCcEEEEEeC-CCC--EEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEec-CCC--
Q psy6444 9 LTCSGHTRPVVHLAFSDITESGYFLISACK-DGK--PMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGA-ADF-- 82 (88)
Q Consensus 9 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~-- 82 (88)
..+..+......++|+ ++|+.++..+. ++. +..+++..+.. ..+..........+|+|++.+++..+ .++
T Consensus 285 ~~lt~~~~~~~~~~~s---pDG~~l~f~sd~~g~~~iy~~dl~~g~~-~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~ 360 (433)
T PRK04922 285 TRLTNHFGIDTEPTWA---PDGKSIYFTSDRGGRPQIYRVAASGGSA-ERLTFQGNYNARASVSPDGKKIAMVHGSGGQY 360 (433)
T ss_pred EECccCCCCccceEEC---CCCCEEEEEECCCCCceEEEEECCCCCe-EEeecCCCCccCEEECCCCCEEEEEECCCCce
Confidence 3444444445678899 78987776553 444 44556554443 22222223344679999999887543 222
Q ss_pred eEEEcC
Q psy6444 83 QAKALK 88 (88)
Q Consensus 83 ~i~~~~ 88 (88)
.+.+||
T Consensus 361 ~I~v~d 366 (433)
T PRK04922 361 RIAVMD 366 (433)
T ss_pred eEEEEE
Confidence 466654
No 266
>KOG2079|consensus
Probab=97.12 E-value=0.0069 Score=40.30 Aligned_cols=67 Identities=19% Similarity=0.227 Sum_probs=50.3
Q ss_pred CCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCC---eEEEEEECCCCCeEEEecCCCe
Q psy6444 14 HTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKG---CVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 14 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
-+++|.+++|+ .+|..++.|..+|.|.+||..+++.+..+..+.. .+..+.+..++..++++-..|.
T Consensus 129 v~~~Vtsvafn---~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs 198 (1206)
T KOG2079|consen 129 VQGPVTSVAFN---QDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS 198 (1206)
T ss_pred cCCcceeeEec---CCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc
Confidence 35789999999 8999999999999999999998887777655433 3344455555666667655554
No 267
>KOG3881|consensus
Probab=97.08 E-value=0.0068 Score=36.03 Aligned_cols=68 Identities=10% Similarity=0.113 Sum_probs=53.6
Q ss_pred EEEEEEEecCCC--CcEEEEEeCCCCEEEEECCCCC-EEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 18 VVHLAFSDITES--GYFLISACKDGKPMLRQGDTGD-WIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 18 v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
+..+.|- +. ...++++..-+.+++||...++ ++.++......+.++...|.+.++.++...+.+..+|
T Consensus 205 ~tdi~Fl---~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD 275 (412)
T KOG3881|consen 205 ITDIRFL---EGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFD 275 (412)
T ss_pred eccceec---CCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheec
Confidence 3456676 33 5788999999999999998765 5677777788999999999999999887766665554
No 268
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=97.06 E-value=0.01 Score=35.31 Aligned_cols=59 Identities=12% Similarity=0.135 Sum_probs=42.7
Q ss_pred CcEE-EEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 30 GYFL-ISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 30 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
++++ +....++.+.+.|..+.+.+..+.........+.+++|++++..++.|+.+.++|
T Consensus 5 ~~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD 64 (369)
T PF02239_consen 5 GNLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVID 64 (369)
T ss_dssp GGEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEE
T ss_pred ccEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEE
Confidence 3444 4556678999999998888888886555555678899999988888899988875
No 269
>KOG0309|consensus
Probab=97.04 E-value=0.0011 Score=42.46 Aligned_cols=83 Identities=14% Similarity=0.134 Sum_probs=57.1
Q ss_pred CccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC-EEEEecCCCCeEEEEEECCC-CCeEEEecC
Q psy6444 3 SIRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD-WIGTFEGHKGCVWGVDINKD-ASKAASGAA 80 (88)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~ 80 (88)
+...++.....-......+.|+ .....+...+....+.+|+.+.+. .+..+++|...+..++|+.. ...+.+++.
T Consensus 146 Sp~~p~ys~~~w~s~asqVkwn---yk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~ 222 (1081)
T KOG0309|consen 146 SPHRPFYSTSSWRSAASQVKWN---YKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSN 222 (1081)
T ss_pred CCCcceeeeecccccCceeeec---ccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCC
Confidence 3344444444444555678888 444444445556679999987654 67888889888888888653 345678889
Q ss_pred CCeEEEcC
Q psy6444 81 DFQAKALK 88 (88)
Q Consensus 81 d~~i~~~~ 88 (88)
|++++.||
T Consensus 223 d~tvkfw~ 230 (1081)
T KOG0309|consen 223 DGTVKFWD 230 (1081)
T ss_pred CCceeeec
Confidence 99999996
No 270
>KOG3914|consensus
Probab=97.04 E-value=0.0047 Score=36.62 Aligned_cols=50 Identities=14% Similarity=0.088 Sum_probs=36.7
Q ss_pred EeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEE
Q psy6444 36 ACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
.++.+.+.+|.... .....+.+|-+.+..++++||++.++++-.|..||+
T Consensus 128 agD~~~~di~s~~~-~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRv 177 (390)
T KOG3914|consen 128 AGDVYSFDILSADS-GRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRV 177 (390)
T ss_pred cCCceeeeeecccc-cCcchhhhhhhhhheeeecCCCCEEEEecCCceEEE
Confidence 33334444555443 223456788899999999999999999999999986
No 271
>PRK01029 tolB translocation protein TolB; Provisional
Probab=97.03 E-value=0.023 Score=34.43 Aligned_cols=64 Identities=11% Similarity=-0.110 Sum_probs=42.1
Q ss_pred EEecCCCCCEEEEEEEecCCCCcEEEEEeCC---CCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEE
Q psy6444 9 LTCSGHTRPVVHLAFSDITESGYFLISACKD---GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAA 76 (88)
Q Consensus 9 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 76 (88)
..+..+...+....|+ ++|+.++....+ ..+.+|++..+.. ..+......+....|+|+++.++
T Consensus 320 ~~lt~~~~~~~~p~wS---PDG~~Laf~~~~~g~~~I~v~dl~~g~~-~~Lt~~~~~~~~p~wSpDG~~L~ 386 (428)
T PRK01029 320 RLLTKKYRNSSCPAWS---PDGKKIAFCSVIKGVRQICVYDLATGRD-YQLTTSPENKESPSWAIDSLHLV 386 (428)
T ss_pred EEeccCCCCccceeEC---CCCCEEEEEEcCCCCcEEEEEECCCCCe-EEccCCCCCccceEECCCCCEEE
Confidence 3344444556778899 799887765443 3578889876664 33333334556789999998776
No 272
>KOG2315|consensus
Probab=97.01 E-value=0.024 Score=35.22 Aligned_cols=68 Identities=15% Similarity=0.035 Sum_probs=48.1
Q ss_pred CCCEEEEEEEecCCCCcEEEE--EeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCC---CeEEEcC
Q psy6444 15 TRPVVHLAFSDITESGYFLIS--ACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAAD---FQAKALK 88 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d---~~i~~~~ 88 (88)
.++|.++.|+ +++.-++. |----.+.+|+.+ +..+..+.. +.-..+-|+|.|++++-++.+ |.+.+||
T Consensus 270 ~GPVhdv~W~---~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~e--gpRN~~~fnp~g~ii~lAGFGNL~G~mEvwD 342 (566)
T KOG2315|consen 270 EGPVHDVTWS---PSGREFAVVYGFMPAKVTIFNLR-GKPVFDFPE--GPRNTAFFNPHGNIILLAGFGNLPGDMEVWD 342 (566)
T ss_pred CCCceEEEEC---CCCCEEEEEEecccceEEEEcCC-CCEeEeCCC--CCccceEECCCCCEEEEeecCCCCCceEEEe
Confidence 6899999999 67754443 2223457788875 666666654 334567889999988877655 6788887
No 273
>KOG0280|consensus
Probab=97.01 E-value=0.015 Score=33.66 Aligned_cols=68 Identities=15% Similarity=0.123 Sum_probs=50.2
Q ss_pred EEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC--EEEEecCCCCeEEEEEECC-CCCeEEEecCCCeEEEcC
Q psy6444 18 VVHLAFSDITESGYFLISACKDGKPMLRQGDTGD--WIGTFEGHKGCVWGVDINK-DASKAASGAADFQAKALK 88 (88)
Q Consensus 18 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~~~~ 88 (88)
..++.|+ +.+..+++...+|.+.+-+..... ..+..+.|.-.++...|+. +.+.+.+++.|+.+..||
T Consensus 124 ~lslD~~---~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D 194 (339)
T KOG0280|consen 124 ALSLDIS---TSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWD 194 (339)
T ss_pred eeEEEee---ccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEE
Confidence 4467788 678888888888888854433332 2346788888888888865 455778999999999987
No 274
>KOG2066|consensus
Probab=97.00 E-value=0.014 Score=37.74 Aligned_cols=73 Identities=19% Similarity=0.215 Sum_probs=49.6
Q ss_pred EEecCCCCCEEEEEEEec----------CCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCC-----CC
Q psy6444 9 LTCSGHTRPVVHLAFSDI----------TESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKD-----AS 73 (88)
Q Consensus 9 ~~~~~~~~~v~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~ 73 (88)
..+..|.+.|....+.-+ ..+|+.+++++.||.+.+..+.+......+. ....+..++++|+ ..
T Consensus 52 ~~~GtH~g~v~~~~~~~~~~~~~~~s~~~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~rpiksial~Pd~~~~~sk 130 (846)
T KOG2066|consen 52 FALGTHRGAVYLTTCQGNPKTNFDHSSSILEGEYVASCSDDGKVVIGSLFTDDEITQYD-FKRPIKSIALHPDFSRQQSK 130 (846)
T ss_pred eeeccccceEEEEecCCcccccccccccccCCceEEEecCCCcEEEeeccCCccceeEe-cCCcceeEEeccchhhhhhh
Confidence 345556666665555410 0249999999999999998887777655554 3356788888887 34
Q ss_pred eEEEecCCC
Q psy6444 74 KAASGAADF 82 (88)
Q Consensus 74 ~~~~~~~d~ 82 (88)
++++++..|
T Consensus 131 ~fv~GG~ag 139 (846)
T KOG2066|consen 131 QFVSGGMAG 139 (846)
T ss_pred heeecCcce
Confidence 666666655
No 275
>KOG1354|consensus
Probab=96.92 E-value=0.011 Score=34.88 Aligned_cols=70 Identities=17% Similarity=0.173 Sum_probs=49.6
Q ss_pred CCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC-----EEEEecCC------------CCeEEEEEECCCCC--eEE
Q psy6444 16 RPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD-----WIGTFEGH------------KGCVWGVDINKDAS--KAA 76 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~------------~~~i~~~~~~~~~~--~~~ 76 (88)
..+.++.|. ..|+.|++|..+|.+.+|.-.... ....++.| ...|..++|.+++. .++
T Consensus 26 diis~vef~---~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FL 102 (433)
T KOG1354|consen 26 DIISAVEFD---HYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFL 102 (433)
T ss_pred cceeeEEee---cccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEE
Confidence 457889999 899999999999999988533211 11223323 24567788877654 566
Q ss_pred EecCCCeEEEcC
Q psy6444 77 SGAADFQAKALK 88 (88)
Q Consensus 77 ~~~~d~~i~~~~ 88 (88)
....|.++++|.
T Consensus 103 lstNdktiKlWK 114 (433)
T KOG1354|consen 103 LSTNDKTIKLWK 114 (433)
T ss_pred EecCCcceeeee
Confidence 777899999983
No 276
>KOG4714|consensus
Probab=96.92 E-value=0.0028 Score=35.97 Aligned_cols=40 Identities=13% Similarity=0.142 Sum_probs=35.2
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECC
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGD 48 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 48 (88)
+...++.|+.++..+-|+| .+++.|+++++||.+..||..
T Consensus 215 p~S~l~ahk~~i~eV~FHp--k~p~~Lft~sedGslw~wdas 254 (319)
T KOG4714|consen 215 PVSLLKAHKAEIWEVHFHP--KNPEHLFTCSEDGSLWHWDAS 254 (319)
T ss_pred hHHHHHHhhhhhhheeccC--CCchheeEecCCCcEEEEcCC
Confidence 4455677999999999998 899999999999999999876
No 277
>KOG2041|consensus
Probab=96.84 E-value=0.012 Score=37.99 Aligned_cols=69 Identities=16% Similarity=0.134 Sum_probs=56.1
Q ss_pred CCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC---------------EEEEecCCCCeEEEEEECCCCCeEEEecC
Q psy6444 16 RPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD---------------WIGTFEGHKGCVWGVDINKDASKAASGAA 80 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 80 (88)
....|+.|+ .+..+++.++.||.+++..+.+.. .-+.+.+|...|..+.|+...+.+-++..
T Consensus 15 vkL~c~~WN---ke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt 91 (1189)
T KOG2041|consen 15 VKLHCAEWN---KESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDT 91 (1189)
T ss_pred ceEEEEEEc---ccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCC
Confidence 567899999 788899999999999988654211 01346789999999999998888877788
Q ss_pred CCeEEEc
Q psy6444 81 DFQAKAL 87 (88)
Q Consensus 81 d~~i~~~ 87 (88)
+|.|-+|
T Consensus 92 ~GlIiVW 98 (1189)
T KOG2041|consen 92 SGLIIVW 98 (1189)
T ss_pred CceEEEE
Confidence 9999998
No 278
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=96.82 E-value=0.022 Score=38.29 Aligned_cols=66 Identities=11% Similarity=0.102 Sum_probs=49.7
Q ss_pred EEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecC--------------CCCeEEEEEECCCCCeEEEecCCCeE
Q psy6444 19 VHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEG--------------HKGCVWGVDINKDASKAASGAADFQA 84 (88)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~i~~~~~~~~~~~~~~~~~d~~i 84 (88)
..++++ ++|..+++-..++.|.+|+..++... .+.+ .......++++++++.+++-+.++.|
T Consensus 807 ~Gvavd---~dG~LYVADs~N~rIrviD~~tg~v~-tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~I 882 (1057)
T PLN02919 807 LGVLCA---KDGQIYVADSYNHKIKKLDPATKRVT-TLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLI 882 (1057)
T ss_pred ceeeEe---CCCcEEEEECCCCEEEEEECCCCeEE-EEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEE
Confidence 356777 78888888888899999998755432 2221 12356788999999988888889999
Q ss_pred EEcC
Q psy6444 85 KALK 88 (88)
Q Consensus 85 ~~~~ 88 (88)
++||
T Consensus 883 rvid 886 (1057)
T PLN02919 883 RYLD 886 (1057)
T ss_pred EEEE
Confidence 9986
No 279
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=96.80 E-value=0.0083 Score=25.09 Aligned_cols=27 Identities=15% Similarity=-0.023 Sum_probs=23.8
Q ss_pred CeEEEEEECCCCCeEEEecCCCeEEEc
Q psy6444 61 GCVWGVDINKDASKAASGAADFQAKAL 87 (88)
Q Consensus 61 ~~i~~~~~~~~~~~~~~~~~d~~i~~~ 87 (88)
..|..++|+|...+++.+..+|.+.++
T Consensus 12 ~~v~~~~w~P~mdLiA~~t~~g~v~v~ 38 (47)
T PF12894_consen 12 SRVSCMSWCPTMDLIALGTEDGEVLVY 38 (47)
T ss_pred CcEEEEEECCCCCEEEEEECCCeEEEE
Confidence 458899999999999999999998765
No 280
>PRK01029 tolB translocation protein TolB; Provisional
Probab=96.66 E-value=0.029 Score=34.06 Aligned_cols=71 Identities=10% Similarity=-0.124 Sum_probs=42.0
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcE--E-EEEeCCCC--EEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEe
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYF--L-ISACKDGK--PMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASG 78 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 78 (88)
++...+.+..........+|+ |+|+. + +....++. |.+.++..+.. ..+....+.....+|+|||+.++-.
T Consensus 173 dG~~~~~lt~~~~~~~sP~wS---PDG~~~~~~y~S~~~g~~~I~~~~l~~g~~-~~lt~~~g~~~~p~wSPDG~~Laf~ 248 (428)
T PRK01029 173 DGQNLRPLTQEHSLSITPTWM---HIGSGFPYLYVSYKLGVPKIFLGSLENPAG-KKILALQGNQLMPTFSPRKKLLAFI 248 (428)
T ss_pred CCCCceEcccCCCCcccceEc---cCCCceEEEEEEccCCCceEEEEECCCCCc-eEeecCCCCccceEECCCCCEEEEE
Confidence 344444555555667788999 78864 3 23444443 55667765543 2222233344567999999888743
No 281
>PRK04043 tolB translocation protein TolB; Provisional
Probab=96.59 E-value=0.07 Score=32.41 Aligned_cols=73 Identities=12% Similarity=-0.016 Sum_probs=43.5
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcE-EEEEeCC---CCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEE-Ee
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYF-LISACKD---GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAA-SG 78 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~ 78 (88)
++...+.+.... ......|+ ++|+. ++..+.. ..+.++++.+++... +....+......|+||+..++ +.
T Consensus 177 dg~~~~~~~~~~-~~~~p~wS---pDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~-lt~~~g~~~~~~~SPDG~~la~~~ 251 (419)
T PRK04043 177 TLTYQKVIVKGG-LNIFPKWA---NKEQTAFYYTSYGERKPTLYKYNLYTGKKEK-IASSQGMLVVSDVSKDGSKLLLTM 251 (419)
T ss_pred CCCceeEEccCC-CeEeEEEC---CCCCcEEEEEEccCCCCEEEEEECCCCcEEE-EecCCCcEEeeEECCCCCEEEEEE
Confidence 344344344333 67788999 78874 5544433 347777887665433 333445556678999998775 44
Q ss_pred cCC
Q psy6444 79 AAD 81 (88)
Q Consensus 79 ~~d 81 (88)
..+
T Consensus 252 ~~~ 254 (419)
T PRK04043 252 APK 254 (419)
T ss_pred ccC
Confidence 333
No 282
>KOG1240|consensus
Probab=96.57 E-value=0.041 Score=37.50 Aligned_cols=71 Identities=13% Similarity=0.063 Sum_probs=50.9
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecC-CCCeEEEEEECCC---CCeEEEec--CCCeEEEcC
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEG-HKGCVWGVDINKD---ASKAASGA--ADFQAKALK 88 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~---~~~~~~~~--~d~~i~~~~ 88 (88)
.+.|..++.+ +.++|++.|...|.+.+||++-+..+..+.. +...+.++..+|- ....++++ ..+.+.+|+
T Consensus 1195 hG~vTSi~id---p~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn 1271 (1431)
T KOG1240|consen 1195 HGLVTSIVID---PWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWN 1271 (1431)
T ss_pred ccceeEEEec---CCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeee
Confidence 4778999999 7899999999999999999987766655532 4466666666653 23444433 456677775
No 283
>KOG1354|consensus
Probab=96.57 E-value=0.029 Score=33.26 Aligned_cols=69 Identities=14% Similarity=0.214 Sum_probs=50.1
Q ss_pred CCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCC-CCEEEEecCC------------CCeE---EEEEECCCCCeEEEec
Q psy6444 16 RPVVHLAFSDITESGYFLISACKDGKPMLRQGDT-GDWIGTFEGH------------KGCV---WGVDINKDASKAASGA 79 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------------~~~i---~~~~~~~~~~~~~~~~ 79 (88)
..|.++.|+ .+|+++.+-.. -++++||+.. .+.+..++.| ..+| ...+|+.++..+.+|+
T Consensus 273 sSISDvKFs---~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGs 348 (433)
T KOG1354|consen 273 SSISDVKFS---HSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGS 348 (433)
T ss_pred hhhhceEEc---cCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEeccc
Confidence 567889999 89999887764 3699999853 3444444332 2333 4568898888999999
Q ss_pred CCCeEEEcC
Q psy6444 80 ADFQAKALK 88 (88)
Q Consensus 80 ~d~~i~~~~ 88 (88)
.....++++
T Consensus 349 y~n~frvf~ 357 (433)
T KOG1354|consen 349 YNNVFRVFN 357 (433)
T ss_pred ccceEEEec
Confidence 988888874
No 284
>PRK00178 tolB translocation protein TolB; Provisional
Probab=96.40 E-value=0.088 Score=31.79 Aligned_cols=60 Identities=17% Similarity=0.003 Sum_probs=38.4
Q ss_pred CCCEEEEEEEecCCCCcEEE-EEeCCC--CEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEe
Q psy6444 15 TRPVVHLAFSDITESGYFLI-SACKDG--KPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASG 78 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 78 (88)
.+.+....|+ ++|+.++ +...++ .+.++++.++.. ..+..+........|+|++..++-.
T Consensus 242 ~g~~~~~~~S---pDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~~spDg~~i~f~ 304 (430)
T PRK00178 242 EGLNGAPAWS---PDGSKLAFVLSKDGNPEIYVMDLASRQL-SRVTNHPAIDTEPFWGKDGRTLYFT 304 (430)
T ss_pred CCCcCCeEEC---CCCCEEEEEEccCCCceEEEEECCCCCe-EEcccCCCCcCCeEECCCCCEEEEE
Confidence 3444568899 7887766 455555 466778876553 3344444445567899999877643
No 285
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=96.39 E-value=0.026 Score=36.83 Aligned_cols=63 Identities=13% Similarity=0.162 Sum_probs=45.4
Q ss_pred CEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCE-EEEecCCCCeEEEEEECCCCCeEEEecCCCeE
Q psy6444 17 PVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDW-IGTFEGHKGCVWGVDINKDASKAASGAADFQA 84 (88)
Q Consensus 17 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 84 (88)
...|++- .....++.|+.+|.|++|+-. +.. -..+.+-...|.+++.+.||++++..|....+
T Consensus 579 ~Fs~~aT----t~~G~iavgs~~G~IRLyd~~-g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~tyLl 642 (794)
T PF08553_consen 579 NFSCFAT----TEDGYIAVGSNKGDIRLYDRL-GKRAKTALPGLGDPIIGIDVTADGKWILATCKTYLL 642 (794)
T ss_pred CceEEEe----cCCceEEEEeCCCcEEeeccc-chhhhhcCCCCCCCeeEEEecCCCcEEEEeecceEE
Confidence 3555543 345688999999999999843 332 23355667899999999999999877665444
No 286
>PRK04792 tolB translocation protein TolB; Provisional
Probab=96.37 E-value=0.088 Score=32.20 Aligned_cols=58 Identities=17% Similarity=0.035 Sum_probs=37.4
Q ss_pred CEEEEEEEecCCCCcEEE-EEeCCCC--EEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEe
Q psy6444 17 PVVHLAFSDITESGYFLI-SACKDGK--PMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASG 78 (88)
Q Consensus 17 ~v~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 78 (88)
......|+ ++|+.++ +...++. +.++++.++.. ..+..+........|+|++..++..
T Consensus 263 ~~~~~~wS---PDG~~La~~~~~~g~~~Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~ 323 (448)
T PRK04792 263 INGAPRFS---PDGKKLALVLSKDGQPEIYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFT 323 (448)
T ss_pred CcCCeeEC---CCCCEEEEEEeCCCCeEEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEE
Confidence 34467899 7898665 4555665 55667765543 4444444455677899999977643
No 287
>KOG1912|consensus
Probab=96.35 E-value=0.023 Score=37.05 Aligned_cols=83 Identities=13% Similarity=0.037 Sum_probs=57.1
Q ss_pred ceeEEecCCCCCEEEEEEEec-------C-C-CCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECC---CC-
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDI-------T-E-SGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINK---DA- 72 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~-------~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~- 72 (88)
+.+++++-|...|..++|.|. + + ..-.++++.-.|.|.+||+..+..+..+..+...+..+.|-+ +.
T Consensus 46 q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Sr 125 (1062)
T KOG1912|consen 46 QLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSR 125 (1062)
T ss_pred hhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcch
Confidence 456677889999999999864 1 1 123466777789999999987777777777777777776654 33
Q ss_pred CeEEEecCCCeEEEcC
Q psy6444 73 SKAASGAADFQAKALK 88 (88)
Q Consensus 73 ~~~~~~~~d~~i~~~~ 88 (88)
..++.-....++-+||
T Consensus 126 d~LlaIh~ss~lvLwn 141 (1062)
T KOG1912|consen 126 DVLLAIHGSSTLVLWN 141 (1062)
T ss_pred heeEEecCCcEEEEEE
Confidence 2444444556677763
No 288
>KOG3617|consensus
Probab=96.32 E-value=0.0056 Score=40.14 Aligned_cols=67 Identities=13% Similarity=0.150 Sum_probs=52.7
Q ss_pred EEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEc
Q psy6444 18 VVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKAL 87 (88)
Q Consensus 18 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 87 (88)
+.+++|+ |..-.++++..-+.+.+|...+.+.-.....|...|..+.|+++|..+.++-.-+.+.+|
T Consensus 62 atSLCWH---pe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lw 128 (1416)
T KOG3617|consen 62 ATSLCWH---PEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLW 128 (1416)
T ss_pred hhhhccC---hHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEE
Confidence 4457888 566677888888889999876554433345688999999999999999998888888887
No 289
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.28 E-value=0.023 Score=23.34 Aligned_cols=32 Identities=25% Similarity=0.258 Sum_probs=25.2
Q ss_pred CCEEEEEEEecCCCC--cEEEEEeCCCCEEEEECCC
Q psy6444 16 RPVVHLAFSDITESG--YFLISACKDGKPMLRQGDT 49 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 49 (88)
+.+.++.|+| ..+ ++|+-+=..+.+.++|.++
T Consensus 1 GAvR~~kFsP--~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSP--EPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCC--CCCcccEEEEEccCCeEEEEEccc
Confidence 4688999996 555 6777777778899999975
No 290
>KOG0882|consensus
Probab=96.19 E-value=0.028 Score=34.43 Aligned_cols=72 Identities=14% Similarity=0.170 Sum_probs=56.3
Q ss_pred CCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCC------CCE---------EEEecCCCCeEEEEEECCCCCeEEE
Q psy6444 13 GHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDT------GDW---------IGTFEGHKGCVWGVDINKDASKAAS 77 (88)
Q Consensus 13 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---------~~~~~~~~~~i~~~~~~~~~~~~~~ 77 (88)
-|..+|.++.+. +.+....+....|.|..|.... .+. +..+...+....++.++|++.++.+
T Consensus 142 lH~sPV~~i~y~---qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qist 218 (558)
T KOG0882|consen 142 LHFSPVKKIRYN---QAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQIST 218 (558)
T ss_pred cccCceEEEEee---ccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccc
Confidence 388999999999 7899999999999999998752 111 1122334566678899999999999
Q ss_pred ecCCCeEEEc
Q psy6444 78 GAADFQAKAL 87 (88)
Q Consensus 78 ~~~d~~i~~~ 87 (88)
-+.|..+|++
T Consensus 219 l~~DrkVR~F 228 (558)
T KOG0882|consen 219 LNPDRKVRGF 228 (558)
T ss_pred cCcccEEEEE
Confidence 8899998876
No 291
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=96.19 E-value=0.14 Score=34.31 Aligned_cols=68 Identities=13% Similarity=0.059 Sum_probs=48.6
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEE----ECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEE
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLR----QGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
...|..+.|- ++.+-++.+..+|.+.+. +.... .+.....-...|.+++||||...++-...++++.+
T Consensus 75 ~~~ivs~~yl---~d~~~l~~~~~~Gdi~~~~~~~~~~~~-~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~ 146 (928)
T PF04762_consen 75 NDKIVSFQYL---ADSESLCIALASGDIILVREDPDPDED-EIEIVGSVDSGILAASWSPDEELLALVTGEGNLLL 146 (928)
T ss_pred CCcEEEEEec---cCCCcEEEEECCceEEEEEccCCCCCc-eeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEE
Confidence 3568888888 688888888989998887 33222 22222334568999999999999987776666543
No 292
>KOG4532|consensus
Probab=96.19 E-value=0.1 Score=30.11 Aligned_cols=56 Identities=14% Similarity=0.023 Sum_probs=41.7
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEE-----EEecCCCCeEEEEEECCCCC
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWI-----GTFEGHKGCVWGVDINKDAS 73 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~~~~~~~~ 73 (88)
+..-.+..|+ .....++.+..|+++.+||++.-... ..-..|.+.++...|++.|.
T Consensus 203 ~D~gF~~S~s---~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~ 263 (344)
T KOG4532|consen 203 SDHGFYNSFS---ENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGL 263 (344)
T ss_pred CCCceeeeec---cCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCc
Confidence 3446678888 77788999999999999999753321 22234788999999997554
No 293
>KOG1275|consensus
Probab=96.19 E-value=0.094 Score=34.93 Aligned_cols=53 Identities=17% Similarity=0.221 Sum_probs=44.7
Q ss_pred CCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCC
Q psy6444 28 ESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADF 82 (88)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~ 82 (88)
.+++.+++|...|.|.+.|..+.+.++.+..|.+.+..+ .-+|+.+++++...
T Consensus 185 ~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDf--Dv~GNlLitCG~S~ 237 (1118)
T KOG1275|consen 185 YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDF--DVQGNLLITCGYSM 237 (1118)
T ss_pred ecCcEEEeecccceEEeecCCcCceeeeeeccccceeee--eccCCeEEEeeccc
Confidence 468899999999999999999889999999999988754 55688898876543
No 294
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=96.14 E-value=0.12 Score=30.42 Aligned_cols=68 Identities=13% Similarity=0.097 Sum_probs=45.3
Q ss_pred CEEEEEEEecCCCCcEEEEEeC-CCCEEEEECCC--CC--EEEEecCCCCeEEEEEECCCCCeEEEec-CCCeEEEc
Q psy6444 17 PVVHLAFSDITESGYFLISACK-DGKPMLRQGDT--GD--WIGTFEGHKGCVWGVDINKDASKAASGA-ADFQAKAL 87 (88)
Q Consensus 17 ~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~~ 87 (88)
....+.++ ++|++++.... ...|.+|++.. +. .+..+.......+.+.++|++++++.+. .++.+.+|
T Consensus 246 ~~~~i~is---pdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf 319 (345)
T PF10282_consen 246 APAEIAIS---PDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVF 319 (345)
T ss_dssp SEEEEEE----TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEE
T ss_pred CceeEEEe---cCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEE
Confidence 56788899 79988776554 45688999832 33 3333443345578899999999888665 55667665
No 295
>KOG2314|consensus
Probab=96.10 E-value=0.06 Score=33.89 Aligned_cols=63 Identities=16% Similarity=0.144 Sum_probs=45.3
Q ss_pred CCEEEEEEEecCCCCcEEEEEeC-----------CCCEEEEECCCCCEEEEecC--CCCeEE-EEEECCCCCeEEEecCC
Q psy6444 16 RPVVHLAFSDITESGYFLISACK-----------DGKPMLRQGDTGDWIGTFEG--HKGCVW-GVDINKDASKAASGAAD 81 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~--~~~~i~-~~~~~~~~~~~~~~~~d 81 (88)
..|..+.|+ |+..+|++-+. ...+++||+.+|...+.+.. ....++ -.+||+|..+++....+
T Consensus 250 p~Vq~idfS---P~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~ 326 (698)
T KOG2314|consen 250 PGVQFIDFS---PNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGN 326 (698)
T ss_pred CCceeeecC---CccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEeccc
Confidence 457788999 78889887543 24689999999987666654 333333 35899999998865543
No 296
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=96.07 E-value=0.043 Score=31.51 Aligned_cols=29 Identities=10% Similarity=0.038 Sum_probs=26.7
Q ss_pred CCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 60 KGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 60 ~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
...|..+.++|++..+++...+|.|.+|+
T Consensus 229 ~d~i~kmSlSPdg~~La~ih~sG~lsLW~ 257 (282)
T PF15492_consen 229 QDGIFKMSLSPDGSLLACIHFSGSLSLWE 257 (282)
T ss_pred CCceEEEEECCCCCEEEEEEcCCeEEEEe
Confidence 57889999999999999999999999995
No 297
>KOG3621|consensus
Probab=95.96 E-value=0.037 Score=35.41 Aligned_cols=67 Identities=16% Similarity=0.058 Sum_probs=48.8
Q ss_pred CCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCE---E---EEecCCCCeEEEEEECCCCCeEEEecCCCeEE
Q psy6444 16 RPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDW---I---GTFEGHKGCVWGVDINKDASKAASGAADFQAK 85 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 85 (88)
+.+.....+ .....++.++..+.|.++.+..+.. . ..-+.|...|++++|++++..+.+|-..|.+-
T Consensus 77 ~~~~~~~vs---~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~ 149 (726)
T KOG3621|consen 77 GITCVRSVS---SVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVV 149 (726)
T ss_pred ceEEEEEec---chhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEE
Confidence 344445566 6778888899999999997765321 1 11234678999999999999999988777754
No 298
>KOG4640|consensus
Probab=95.89 E-value=0.083 Score=33.60 Aligned_cols=59 Identities=19% Similarity=0.106 Sum_probs=41.1
Q ss_pred eEEecCCCCCEE-EEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecC-CCCeEEEEEEC
Q psy6444 8 PLTCSGHTRPVV-HLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEG-HKGCVWGVDIN 69 (88)
Q Consensus 8 ~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~ 69 (88)
+-++.-+...+. +++|. ++|+.++.|.+||.|.+.|+..+..+..... ....|..+.|.
T Consensus 54 lwtip~p~~~v~~sL~W~---~DGkllaVg~kdG~I~L~Dve~~~~l~~~~~s~e~~is~~~w~ 114 (665)
T KOG4640|consen 54 LWTIPIPGENVTASLCWR---PDGKLLAVGFKDGTIRLHDVEKGGRLVSFLFSVETDISKGIWD 114 (665)
T ss_pred eEeccCCCCccceeeeec---CCCCEEEEEecCCeEEEEEccCCCceeccccccccchheeecc
Confidence 334444555566 99999 7999999999999999999988876655321 22344444444
No 299
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=95.41 E-value=0.35 Score=30.27 Aligned_cols=70 Identities=19% Similarity=0.184 Sum_probs=53.2
Q ss_pred CCCCCEEEEEEEecCCCCcEEEEEeCCC-CEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEE
Q psy6444 13 GHTRPVVHLAFSDITESGYFLISACKDG-KPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 13 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
+|.+.|.-..+. .+.+.++.+..|+ .+-+++...++ ...+...-+.|.++..+++|..++.+.....+.+
T Consensus 357 ~~~~~VrY~r~~---~~~e~~vigt~dgD~l~iyd~~~~e-~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~v 427 (668)
T COG4946 357 GKKGGVRYRRIQ---VDPEGDVIGTNDGDKLGIYDKDGGE-VKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWV 427 (668)
T ss_pred CCCCceEEEEEc---cCCcceEEeccCCceEEEEecCCce-EEEeeCCccceEEEEEcCCCcEEEEEcCceEEEE
Confidence 456667777776 6777888899998 68899987544 4667777789999999999998877766555544
No 300
>KOG1275|consensus
Probab=95.40 E-value=0.12 Score=34.49 Aligned_cols=41 Identities=12% Similarity=0.058 Sum_probs=30.4
Q ss_pred ccceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCC---------CCEEEEECCC
Q psy6444 4 IRQIPLTCSGHTRPVVHLAFSDITESGYFLISACKD---------GKPMLRQGDT 49 (88)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 49 (88)
.-+.+.++.+|++.+.+++. .|+.+++++.. ..+++||++.
T Consensus 206 s~~~iht~~aHs~siSDfDv-----~GNlLitCG~S~R~~~l~~D~FvkVYDLRm 255 (1118)
T KOG1275|consen 206 SFETIHTFDAHSGSISDFDV-----QGNLLITCGYSMRRYNLAMDPFVKVYDLRM 255 (1118)
T ss_pred cCceeeeeeccccceeeeec-----cCCeEEEeecccccccccccchhhhhhhhh
Confidence 34578889999999987765 58999988874 3456777653
No 301
>KOG4649|consensus
Probab=95.31 E-value=0.22 Score=28.85 Aligned_cols=59 Identities=22% Similarity=0.180 Sum_probs=39.4
Q ss_pred CcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 30 GYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
|++++.++.++.+.+.++.++..+..+.....-=......+++..+.++++|+.....|
T Consensus 63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD 121 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALD 121 (354)
T ss_pred CCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEec
Confidence 55677788888888888888876655543211111123466788888999998876544
No 302
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=95.31 E-value=0.32 Score=29.13 Aligned_cols=67 Identities=10% Similarity=0.054 Sum_probs=46.6
Q ss_pred EEEEEEEecCCCCcEEEEEe----------CCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCC-eEEEec-CCCeEE
Q psy6444 18 VVHLAFSDITESGYFLISAC----------KDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDAS-KAASGA-ADFQAK 85 (88)
Q Consensus 18 v~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~-~d~~i~ 85 (88)
..-++++ ++++.++... ....+.++|..+.+.+..+.. ...++.+++++++. ++.... .++.+.
T Consensus 250 ~q~ia~~---~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~Vs 325 (352)
T TIGR02658 250 WQQVAYH---RARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLY 325 (352)
T ss_pred ceeEEEc---CCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEE
Confidence 3347888 6776666532 113588889888888777764 35788999999999 766554 566676
Q ss_pred EcC
Q psy6444 86 ALK 88 (88)
Q Consensus 86 ~~~ 88 (88)
+.|
T Consensus 326 ViD 328 (352)
T TIGR02658 326 IFD 328 (352)
T ss_pred EEE
Confidence 654
No 303
>KOG2395|consensus
Probab=95.24 E-value=0.31 Score=30.83 Aligned_cols=57 Identities=11% Similarity=0.092 Sum_probs=43.4
Q ss_pred CCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeE
Q psy6444 28 ESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQA 84 (88)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 84 (88)
+....++.++.+|.|++|+-.....-..+.+-...|.++..+.+|.++++.|..-.+
T Consensus 439 T~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~tyLl 495 (644)
T KOG2395|consen 439 TESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATCKTYLL 495 (644)
T ss_pred cCCceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEecccEEE
Confidence 344688899999999999863223334567778899999999999999877765443
No 304
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=94.91 E-value=0.78 Score=31.49 Aligned_cols=67 Identities=16% Similarity=0.063 Sum_probs=44.7
Q ss_pred EEEEEEecCCCCc-EEEEEeCCCCEEEEECCCCCEEEE-------------ecC--------CCCeEEEEEECCCCCeEE
Q psy6444 19 VHLAFSDITESGY-FLISACKDGKPMLRQGDTGDWIGT-------------FEG--------HKGCVWGVDINKDASKAA 76 (88)
Q Consensus 19 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~--------~~~~i~~~~~~~~~~~~~ 76 (88)
..++++ ++++ .+++-..++.|.+|+..++..... +.. .......+++++++..++
T Consensus 743 ~GIavs---pdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYV 819 (1057)
T PLN02919 743 SGISLS---PDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYV 819 (1057)
T ss_pred cEEEEe---CCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEE
Confidence 457888 6776 555666678899999876542110 000 011235778899999888
Q ss_pred EecCCCeEEEcC
Q psy6444 77 SGAADFQAKALK 88 (88)
Q Consensus 77 ~~~~d~~i~~~~ 88 (88)
+-..++.|++||
T Consensus 820 ADs~N~rIrviD 831 (1057)
T PLN02919 820 ADSYNHKIKKLD 831 (1057)
T ss_pred EECCCCEEEEEE
Confidence 888889999885
No 305
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=94.85 E-value=0.18 Score=29.84 Aligned_cols=71 Identities=18% Similarity=0.301 Sum_probs=47.8
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC-E----EEEecCC------------CCeEEEEEECCCCC--eE
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD-W----IGTFEGH------------KGCVWGVDINKDAS--KA 75 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~------------~~~i~~~~~~~~~~--~~ 75 (88)
...+.++.|. ..|.++++|.+.|.+.+|.-.... + ...+++| ...|..+.|..++. .+
T Consensus 26 ad~ItaVefd---~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hF 102 (460)
T COG5170 26 ADKITAVEFD---ETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHF 102 (460)
T ss_pred cceeeEEEec---cccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceE
Confidence 3568889999 899999999999999988644322 1 1123333 23566777755432 55
Q ss_pred EEecCCCeEEEcC
Q psy6444 76 ASGAADFQAKALK 88 (88)
Q Consensus 76 ~~~~~d~~i~~~~ 88 (88)
+....|.+|++|.
T Consensus 103 LlstNdktiKlWK 115 (460)
T COG5170 103 LLSTNDKTIKLWK 115 (460)
T ss_pred EEecCCceeeeee
Confidence 5667889999993
No 306
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=94.71 E-value=0.44 Score=29.45 Aligned_cols=50 Identities=22% Similarity=0.090 Sum_probs=32.8
Q ss_pred CcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCC
Q psy6444 30 GYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADF 82 (88)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~ 82 (88)
|..++..+.+ .+.+||..++..++.+... .|..+.|++++.+++-.+.+.
T Consensus 117 G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~~ 166 (443)
T PF04053_consen 117 GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKDS 166 (443)
T ss_dssp SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S-S
T ss_pred CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCCe
Confidence 6666655544 7999999999988888864 488899999999888766654
No 307
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=94.39 E-value=0.74 Score=28.95 Aligned_cols=70 Identities=7% Similarity=-0.049 Sum_probs=44.1
Q ss_pred CCCCCEEEEEEEecCCCCcEEEE--EeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCC---eEEEc
Q psy6444 13 GHTRPVVHLAFSDITESGYFLIS--ACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADF---QAKAL 87 (88)
Q Consensus 13 ~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~---~i~~~ 87 (88)
+.+++|....|. +.++.++. |-....+.+++++ +.....+... .-..+.|+|.+++++.++.|. .+.+|
T Consensus 272 ~~~~pVhdf~W~---p~S~~F~vi~g~~pa~~s~~~lr-~Nl~~~~Pe~--~rNT~~fsp~~r~il~agF~nl~gni~i~ 345 (561)
T COG5354 272 DLKDPVHDFTWE---PLSSRFAVISGYMPASVSVFDLR-GNLRFYFPEQ--KRNTIFFSPHERYILFAGFDNLQGNIEIF 345 (561)
T ss_pred cccccceeeeec---ccCCceeEEecccccceeecccc-cceEEecCCc--ccccccccCcccEEEEecCCccccceEEe
Confidence 557899999999 56654443 3455678888886 4443443332 224456788888888776653 45555
Q ss_pred C
Q psy6444 88 K 88 (88)
Q Consensus 88 ~ 88 (88)
|
T Consensus 346 ~ 346 (561)
T COG5354 346 D 346 (561)
T ss_pred c
Confidence 3
No 308
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=94.17 E-value=0.51 Score=28.98 Aligned_cols=79 Identities=16% Similarity=0.068 Sum_probs=45.8
Q ss_pred cceeEEecCCCCCEEEEEEEecCCCCcEEEEE-eC--C-CCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEE-Eec
Q psy6444 5 RQIPLTCSGHTRPVVHLAFSDITESGYFLISA-CK--D-GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAA-SGA 79 (88)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~--~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~ 79 (88)
+...+.+......+....|+ +++..++.. -. . ..+.++++..+....... ..+.-...+|+|+|+.++ +..
T Consensus 182 g~~~~~l~~~~~~~~~p~ws---~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~ 257 (425)
T COG0823 182 GYNQQKLTDSGSLILTPAWS---PDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKLAFSSS 257 (425)
T ss_pred CcceeEecccCcceeccccC---cCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCCEEEEEEC
Confidence 34444455555667778888 677654433 11 2 347777887666433332 222334458999999886 666
Q ss_pred CCCeEEEc
Q psy6444 80 ADFQAKAL 87 (88)
Q Consensus 80 ~d~~i~~~ 87 (88)
.|+...+|
T Consensus 258 rdg~~~iy 265 (425)
T COG0823 258 RDGSPDIY 265 (425)
T ss_pred CCCCccEE
Confidence 77665443
No 309
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=94.02 E-value=0.75 Score=27.62 Aligned_cols=63 Identities=13% Similarity=0.051 Sum_probs=43.3
Q ss_pred EEecCCCCcEEEEEeC----------CCCEEEEECCCCCEEEEecCCC-------CeEEEEEECCCCCeEEEecC--CCe
Q psy6444 23 FSDITESGYFLISACK----------DGKPMLRQGDTGDWIGTFEGHK-------GCVWGVDINKDASKAASGAA--DFQ 83 (88)
Q Consensus 23 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~~~~~~~--d~~ 83 (88)
++ ++++.++.+.. +..+.+||..+.+.+..+..-. ......+++++++++..... +..
T Consensus 53 ~s---pDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~ 129 (352)
T TIGR02658 53 VA---SDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPA 129 (352)
T ss_pred EC---CCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCE
Confidence 67 78877766555 5689999999988887776421 12235688999998875552 456
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
+.+.|
T Consensus 130 V~VvD 134 (352)
T TIGR02658 130 VGVVD 134 (352)
T ss_pred EEEEE
Confidence 66543
No 310
>PRK04043 tolB translocation protein TolB; Provisional
Probab=94.00 E-value=0.82 Score=27.99 Aligned_cols=59 Identities=15% Similarity=0.132 Sum_probs=35.1
Q ss_pred CCCCEEEEEEEecCCCCcEEE-EEeCCC--CEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEE
Q psy6444 14 HTRPVVHLAFSDITESGYFLI-SACKDG--KPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAA 76 (88)
Q Consensus 14 ~~~~v~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 76 (88)
..+.....+|+ ++|+.++ +...++ .+.++++..+.. ..+...........|+|||+.++
T Consensus 231 ~~g~~~~~~~S---PDG~~la~~~~~~g~~~Iy~~dl~~g~~-~~LT~~~~~d~~p~~SPDG~~I~ 292 (419)
T PRK04043 231 SQGMLVVSDVS---KDGSKLLLTMAPKGQPDIYLYDTNTKTL-TQITNYPGIDVNGNFVEDDKRIV 292 (419)
T ss_pred CCCcEEeeEEC---CCCCEEEEEEccCCCcEEEEEECCCCcE-EEcccCCCccCccEECCCCCEEE
Confidence 34455667899 7886554 444444 466667665553 33433333234558999998765
No 311
>KOG4190|consensus
Probab=93.98 E-value=0.15 Score=32.47 Aligned_cols=77 Identities=19% Similarity=0.230 Sum_probs=46.2
Q ss_pred ceeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecC-----CCCeEEEEEECCCCCeEE-Eec
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEG-----HKGCVWGVDINKDASKAA-SGA 79 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~~~-~~~ 79 (88)
....+++.|+.++..+.|- .+-+.+++ .|+-+.+||.--++.+..+.. ..+.|.++. +.+...++ .++
T Consensus 775 aCQfTY~aHkk~i~~igfL---~~lr~i~S--cD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~-nv~~~iliAgcs 848 (1034)
T KOG4190|consen 775 ACQFTYQAHKKPIHDIGFL---ADLRSIAS--CDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLE-NVDRHILIAGCS 848 (1034)
T ss_pred eeeeEhhhccCcccceeee---eccceeee--ccCcceeecccccchhHhhhcCcccCCCceeEecc-cCcchheeeecc
Confidence 3567888999999999997 55555554 468899999766665543322 223333332 22333333 334
Q ss_pred CCCeEEEcC
Q psy6444 80 ADFQAKALK 88 (88)
Q Consensus 80 ~d~~i~~~~ 88 (88)
...+++++|
T Consensus 849 aeSTVKl~D 857 (1034)
T KOG4190|consen 849 AESTVKLFD 857 (1034)
T ss_pred chhhheeee
Confidence 555666654
No 312
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=93.21 E-value=1.2 Score=27.27 Aligned_cols=46 Identities=11% Similarity=0.164 Sum_probs=35.5
Q ss_pred CEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 41 KPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
.|.+|+.. |..+..+....+.+..+.|+.+.. ++....||.++++|
T Consensus 62 ~I~iys~s-G~ll~~i~w~~~~iv~~~wt~~e~-LvvV~~dG~v~vy~ 107 (410)
T PF04841_consen 62 SIQIYSSS-GKLLSSIPWDSGRIVGMGWTDDEE-LVVVQSDGTVRVYD 107 (410)
T ss_pred EEEEECCC-CCEeEEEEECCCCEEEEEECCCCe-EEEEEcCCEEEEEe
Confidence 47788764 777888777668999999988544 55667899998875
No 313
>KOG2444|consensus
Probab=93.21 E-value=0.6 Score=26.37 Aligned_cols=58 Identities=10% Similarity=-0.026 Sum_probs=35.7
Q ss_pred cEEEEEeCCCCEEEEECCCCCEEEEecCCC-CeEEEEEECCCCCeEEEe--cCCCeEEEcC
Q psy6444 31 YFLISACKDGKPMLRQGDTGDWIGTFEGHK-GCVWGVDINKDASKAASG--AADFQAKALK 88 (88)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~--~~d~~i~~~~ 88 (88)
.+...+..++.++-|.+..++.+.....|. ........+..+..+..+ +.|..++.|+
T Consensus 115 ~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ 175 (238)
T KOG2444|consen 115 SLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWN 175 (238)
T ss_pred ceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcc
Confidence 366677788889888887777665555554 233333334444555544 6777777775
No 314
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=93.16 E-value=1.1 Score=26.81 Aligned_cols=67 Identities=13% Similarity=0.065 Sum_probs=45.4
Q ss_pred EEEEEEEecCCCCcEEEEEeCCC-CEEEEECCCCCEEEE---ecCCCCeEEEEEECCCCCeEEEec-CCCeEEEc
Q psy6444 18 VVHLAFSDITESGYFLISACKDG-KPMLRQGDTGDWIGT---FEGHKGCVWGVDINKDASKAASGA-ADFQAKAL 87 (88)
Q Consensus 18 v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~~ 87 (88)
+....+. |+++.++...... .+.+|++..+..... .......-+++.|+|++.+....+ -+++|.+|
T Consensus 147 ~H~a~~t---P~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~ 218 (346)
T COG2706 147 VHSANFT---PDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVL 218 (346)
T ss_pred cceeeeC---CCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEE
Confidence 6777788 7898888776643 488888886653211 112345568899999999765443 56677766
No 315
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=93.05 E-value=0.094 Score=30.95 Aligned_cols=68 Identities=12% Similarity=0.091 Sum_probs=43.1
Q ss_pred EEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC------EEE----------EecCCCCeEEEEEECCCCCeEEEecCC
Q psy6444 18 VVHLAFSDITESGYFLISACKDGKPMLRQGDTGD------WIG----------TFEGHKGCVWGVDINKDASKAASGAAD 81 (88)
Q Consensus 18 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~----------~~~~~~~~i~~~~~~~~~~~~~~~~~d 81 (88)
+....|+| ..-..+-..+..|.|++.|++... .+. -+.+-.+.|..+.|++.|+++++...
T Consensus 224 ItSaeFhp--~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy- 300 (460)
T COG5170 224 ITSAEFHP--EMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY- 300 (460)
T ss_pred HhhcccCH--hHcceEEEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-
Confidence 45566774 333555566667899998886321 111 11223466778899999999886432
Q ss_pred CeEEEcC
Q psy6444 82 FQAKALK 88 (88)
Q Consensus 82 ~~i~~~~ 88 (88)
-++++||
T Consensus 301 ltvkiwD 307 (460)
T COG5170 301 LTVKIWD 307 (460)
T ss_pred ceEEEEe
Confidence 4688886
No 316
>KOG2079|consensus
Probab=92.87 E-value=0.19 Score=34.11 Aligned_cols=61 Identities=18% Similarity=0.116 Sum_probs=44.3
Q ss_pred CCCcEEEEEeCCCCEEEEECCCC-CEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 28 ESGYFLISACKDGKPMLRQGDTG-DWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
..+-+++.++..|.+...|.... .+...-....+.+.+++|+.+|..+..|-.+|.+.+||
T Consensus 97 ~~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D 158 (1206)
T KOG2079|consen 97 IVVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWD 158 (1206)
T ss_pred eeeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEE
Confidence 34567788888888887776432 11122233457899999999999998888999999997
No 317
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=92.85 E-value=0.63 Score=23.23 Aligned_cols=67 Identities=15% Similarity=0.088 Sum_probs=40.0
Q ss_pred EEEEEEEecCCCC-cEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 18 VVHLAFSDITESG-YFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 18 v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
|.++++.....+| ..|+.++.|..|++|+- ...+..+... ..+..+.-... ..++-+-.+|++-+|+
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~--~e~~~Ei~e~-~~v~~L~~~~~-~~F~Y~l~NGTVGvY~ 69 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKG--DEIVAEITET-DKVTSLCSLGG-GRFAYALANGTVGVYD 69 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeC--CcEEEEEecc-cceEEEEEcCC-CEEEEEecCCEEEEEe
Confidence 3444444311344 67889999999999864 4555555544 34555444433 4566666777776653
No 318
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=92.66 E-value=1.1 Score=26.72 Aligned_cols=56 Identities=11% Similarity=0.087 Sum_probs=37.8
Q ss_pred CcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEE-EEEECCCCCeEEEecCCCeEEEc
Q psy6444 30 GYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVW-GVDINKDASKAASGAADFQAKAL 87 (88)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~d~~i~~~ 87 (88)
++.++.++.++.+.+++..+++.+..+..+...+. ...+. ++ .+..++.|+.+..+
T Consensus 320 g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~-~~-~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 320 GGYLVVGDFEGYLHWLSREDGSFVARLKTDGSGIASPPVVV-GD-GLLVQTRDGDLYAF 376 (377)
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCccccCCEEE-CC-EEEEEeCCceEEEe
Confidence 55778888899999999988988877765543332 22222 23 45567788887654
No 319
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=92.58 E-value=0.71 Score=29.29 Aligned_cols=30 Identities=13% Similarity=-0.032 Sum_probs=26.8
Q ss_pred CCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 59 HKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 59 ~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
....+.+.+++|+...++.|+.|+++.+||
T Consensus 258 L~s~v~~ca~sp~E~kLvlGC~DgSiiLyD 287 (545)
T PF11768_consen 258 LPSQVICCARSPSEDKLVLGCEDGSIILYD 287 (545)
T ss_pred cCCcceEEecCcccceEEEEecCCeEEEEE
Confidence 456788889999999999999999999986
No 320
>KOG2314|consensus
Probab=92.44 E-value=0.66 Score=29.62 Aligned_cols=60 Identities=15% Similarity=0.158 Sum_probs=39.4
Q ss_pred EEEEEEEecCCCCcEEEEEeC---CCCEEEEECCCCCEE-EEecCCCCeEEEEEECCCCCeEEEecCC
Q psy6444 18 VVHLAFSDITESGYFLISACK---DGKPMLRQGDTGDWI-GTFEGHKGCVWGVDINKDASKAASGAAD 81 (88)
Q Consensus 18 v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~d 81 (88)
...+.|+ |.|++++.+.. .+.+.++|....... .....| .....+.|.|.|+++.+++..
T Consensus 495 ~N~vfws---PkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh-~~at~veWDPtGRYvvT~ss~ 558 (698)
T KOG2314|consen 495 ANTVFWS---PKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEH-FAATEVEWDPTGRYVVTSSSS 558 (698)
T ss_pred cceEEEc---CCCcEEEEEEecccccceEEEecchhhhhhccCccc-cccccceECCCCCEEEEeeeh
Confidence 4457889 79998876544 567889887642211 112223 345678999999999876543
No 321
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=92.15 E-value=2 Score=29.24 Aligned_cols=63 Identities=19% Similarity=0.185 Sum_probs=42.9
Q ss_pred EEEEEecCCCCcEEEEEeC---CCCEEEEECCCCCEEEEec----CCCCeEEEEEECCCCCeEEEecCCCeEEEc
Q psy6444 20 HLAFSDITESGYFLISACK---DGKPMLRQGDTGDWIGTFE----GHKGCVWGVDINKDASKAASGAADFQAKAL 87 (88)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 87 (88)
+++|- |.|+++++.-. ...|.+|. ++|-.-..|. .....+..+.|+.++..++....|. +.+|
T Consensus 261 ~l~Wr---PsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLW 330 (928)
T PF04762_consen 261 ALSWR---PSGNLIASSQRLPDRHDVVFFE-RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLW 330 (928)
T ss_pred CccCC---CCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEE
Confidence 57888 79999887655 23466665 3454433332 3456789999999999888765544 7776
No 322
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=92.00 E-value=1.1 Score=28.65 Aligned_cols=56 Identities=9% Similarity=0.150 Sum_probs=41.6
Q ss_pred CCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 28 ESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
....+++.++..|.+++||-...+.-..+.+-...|.++..+.+|.++++.|..-.
T Consensus 571 TesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~yl 626 (776)
T COG5167 571 TESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKNYL 626 (776)
T ss_pred ccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecceE
Confidence 44568899999999999985433333445666778999999999998887776543
No 323
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=91.93 E-value=1.6 Score=25.83 Aligned_cols=67 Identities=12% Similarity=0.050 Sum_probs=44.3
Q ss_pred EEEEEEEecCCCCcEEEEEeCC----CCEEEEECCCC--C--EEEEecCCCCeEEEEEECCCCCeEEEec-CCCeEEEc
Q psy6444 18 VVHLAFSDITESGYFLISACKD----GKPMLRQGDTG--D--WIGTFEGHKGCVWGVDINKDASKAASGA-ADFQAKAL 87 (88)
Q Consensus 18 v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~~ 87 (88)
...+.++ ++++.+++.... +.+..|.+... . .+............+++++++.+++.+. .++.+.++
T Consensus 39 Ps~l~~~---~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~ 114 (345)
T PF10282_consen 39 PSWLAVS---PDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVF 114 (345)
T ss_dssp ECCEEE----TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CceEEEE---eCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEE
Confidence 4456777 788888888773 57887877643 2 3333433445567789999999888765 56666654
No 324
>KOG1912|consensus
Probab=91.87 E-value=2.7 Score=28.28 Aligned_cols=77 Identities=12% Similarity=0.059 Sum_probs=48.8
Q ss_pred eEEecCCCCCEEEEEEEecCCCC-cEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECC-CCCeEEEecCCCeE
Q psy6444 8 PLTCSGHTRPVVHLAFSDITESG-YFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINK-DASKAASGAADFQA 84 (88)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i 84 (88)
+..++.|..++.++.|-+...+. ..++.-.....+.+|+..+|...-+.........++.+.| +.+.+..-+..|.+
T Consensus 102 ~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~v 180 (1062)
T KOG1912|consen 102 INWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFV 180 (1062)
T ss_pred hhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceE
Confidence 34456677788888887644555 5566666667899999888887666665555555566666 44444333333433
No 325
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=91.78 E-value=2 Score=26.52 Aligned_cols=52 Identities=15% Similarity=0.190 Sum_probs=40.5
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCC
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKG 61 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 61 (88)
....+.+....+..+..+ |.+.+.+....-|.|.++|+..+..++.++|...
T Consensus 299 ~r~~l~D~~R~~~~i~~s---P~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRd 350 (415)
T PF14655_consen 299 MRFGLPDSKREGESICLS---PSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRD 350 (415)
T ss_pred eEEeeccCCceEEEEEEC---CCCCEEEEEcCCCcEEEEECCCChhhhhhccCcc
Confidence 345566666778889999 6788888877778999999998887777777543
No 326
>KOG4497|consensus
Probab=91.77 E-value=1.8 Score=26.06 Aligned_cols=67 Identities=6% Similarity=-0.004 Sum_probs=47.5
Q ss_pred CCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeE
Q psy6444 14 HTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQA 84 (88)
Q Consensus 14 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 84 (88)
...+|....|+ |....++.+.....+.+|... +.......+..-.|..+.|...|..++-.++|...
T Consensus 360 Qk~piraf~Wd---P~~prL~vctg~srLY~W~ps-g~~~V~vP~~GF~i~~l~W~~~g~~i~l~~kDafc 426 (447)
T KOG4497|consen 360 QKHPIRAFEWD---PGRPRLVVCTGKSRLYFWAPS-GPRVVGVPKKGFNIQKLQWLQPGEFIVLCGKDAFC 426 (447)
T ss_pred hccceeEEEeC---CCCceEEEEcCCceEEEEcCC-CceEEecCCCCceeeeEEecCCCcEEEEEcCCceE
Confidence 35788999999 455555555545568899765 55444444455678899999999998888888653
No 327
>KOG0882|consensus
Probab=91.68 E-value=0.072 Score=32.75 Aligned_cols=71 Identities=21% Similarity=0.340 Sum_probs=50.2
Q ss_pred CCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCC--CC-EEEEecCCCCeEEEEEECCCCCeEEEecC-CCeEEEcC
Q psy6444 14 HTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDT--GD-WIGTFEGHKGCVWGVDINKDASKAASGAA-DFQAKALK 88 (88)
Q Consensus 14 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~~i~~~~ 88 (88)
|+..+..+.- .-.+.+.+++-||.+++|-... +. -+..+..|-..+.+++.+.++.++.|.+. |..++++|
T Consensus 8 hrd~i~hv~~----tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfD 82 (558)
T KOG0882|consen 8 HRDVITHVFP----TKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFD 82 (558)
T ss_pred ccceeeeEee----ehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEE
Confidence 5566666533 5678999999999999996542 11 22334456667777788888888888776 88888765
No 328
>KOG1920|consensus
Probab=91.45 E-value=3.6 Score=28.86 Aligned_cols=67 Identities=10% Similarity=0.010 Sum_probs=48.2
Q ss_pred CCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEE
Q psy6444 16 RPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
..+..+.|. .+.+-++.+...|.+.+.+..+.. +.....-.+.|.+++|+||...++-....+++.+
T Consensus 69 ~~i~s~~fl---~d~~~i~v~~~~G~iilvd~et~~-~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~ 135 (1265)
T KOG1920|consen 69 DEIVSVQFL---ADTNSICVITALGDIILVDPETLE-LEIVGNVDNGISAASWSPDEELLALITGRQTLLF 135 (1265)
T ss_pred cceEEEEEe---cccceEEEEecCCcEEEEcccccc-eeeeeeccCceEEEeecCCCcEEEEEeCCcEEEE
Confidence 467778887 778888888888988887665433 2222234578899999999998887776666543
No 329
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=91.14 E-value=0.5 Score=18.37 Aligned_cols=28 Identities=7% Similarity=-0.134 Sum_probs=17.2
Q ss_pred CCeEEEEEECCCCCeEE-EecCC--CeEEEc
Q psy6444 60 KGCVWGVDINKDASKAA-SGAAD--FQAKAL 87 (88)
Q Consensus 60 ~~~i~~~~~~~~~~~~~-~~~~d--~~i~~~ 87 (88)
...-....|+|+|+.++ ++..+ +...+|
T Consensus 8 ~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 8 PGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 34556778999999876 44455 554444
No 330
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=91.09 E-value=2.3 Score=26.00 Aligned_cols=77 Identities=13% Similarity=0.017 Sum_probs=44.9
Q ss_pred eeEEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEe--cC------CCCeEEEEEECC-----CC-
Q psy6444 7 IPLTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTF--EG------HKGCVWGVDINK-----DA- 72 (88)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~i~~~~~~~-----~~- 72 (88)
+..-+...+++|.+++.+ +-.+++.+..+|.+.+.|.+....+..- .. ....+..+.|.. |+
T Consensus 78 P~~l~~~~~g~vtal~~S----~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~y 153 (395)
T PF08596_consen 78 PLTLLDAKQGPVTALKNS----DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGY 153 (395)
T ss_dssp EEEEE---S-SEEEEEE-----BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSS
T ss_pred chhheeccCCcEeEEecC----CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcc
Confidence 444555567999999987 6779999999999999999754444431 11 123444555542 22
Q ss_pred --CeEEEecCCCeEEEc
Q psy6444 73 --SKAASGAADFQAKAL 87 (88)
Q Consensus 73 --~~~~~~~~d~~i~~~ 87 (88)
..++++...|.+.+|
T Consensus 154 SSi~L~vGTn~G~v~~f 170 (395)
T PF08596_consen 154 SSICLLVGTNSGNVLTF 170 (395)
T ss_dssp EEEEEEEEETTSEEEEE
T ss_pred cceEEEEEeCCCCEEEE
Confidence 255566666776654
No 331
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=90.84 E-value=2.2 Score=25.25 Aligned_cols=67 Identities=12% Similarity=0.020 Sum_probs=43.2
Q ss_pred EEEEEecCCCCcEEEEEeCCCC-EEEEECCCCCEEEEecCCCCeEE--EEEECCCCCeEEEecCC-----CeEEEcC
Q psy6444 20 HLAFSDITESGYFLISACKDGK-PMLRQGDTGDWIGTFEGHKGCVW--GVDINKDASKAASGAAD-----FQAKALK 88 (88)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~d-----~~i~~~~ 88 (88)
.+..+| ..+..++.+..-|. ..+||..++.....+....+..+ +-.|+++|+++.+.-.| +.|-|||
T Consensus 9 ~~a~~p--~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd 83 (305)
T PF07433_consen 9 GVAAHP--TRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYD 83 (305)
T ss_pred ceeeCC--CCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEE
Confidence 345563 35555555655554 66789888887777665555443 45899999999875433 4566664
No 332
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=90.53 E-value=3.4 Score=26.89 Aligned_cols=65 Identities=8% Similarity=0.009 Sum_probs=36.3
Q ss_pred EEEEecCCCCcEEEEEeCCCCEEEEECCC-CCEEEEecCCCCeEEEEEECCCCCeEEEecCCC-eEEEcC
Q psy6444 21 LAFSDITESGYFLISACKDGKPMLRQGDT-GDWIGTFEGHKGCVWGVDINKDASKAASGAADF-QAKALK 88 (88)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~-~i~~~~ 88 (88)
+.|+ |....++.-.....-.++++.. +.++..-....+.|.+-+|.+||+.++.+-... ...+||
T Consensus 118 CVWH---Pk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd 184 (671)
T PF15390_consen 118 CVWH---PKKAILTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWD 184 (671)
T ss_pred cccc---CCCceEEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEec
Confidence 4566 3444444333222223344432 234444445678999999999999887554333 356776
No 333
>KOG1916|consensus
Probab=90.49 E-value=0.58 Score=31.70 Aligned_cols=73 Identities=14% Similarity=0.072 Sum_probs=43.3
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeE-----------EEEEECCCCCeEEEecCCCe
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCV-----------WGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-----------~~~~~~~~~~~~~~~~~d~~ 83 (88)
...+..+.|.|...+.-.+..+.+++.+.+........ ..+.+|..++ .--.++|||..++.++.||.
T Consensus 180 gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~ 258 (1283)
T KOG1916|consen 180 GSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGS 258 (1283)
T ss_pred CCCcceeeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCc
Confidence 34456666766445555666677777777654432111 1122232211 11137999999999999999
Q ss_pred EEEcC
Q psy6444 84 AKALK 88 (88)
Q Consensus 84 i~~~~ 88 (88)
++.|+
T Consensus 259 v~f~Q 263 (1283)
T KOG1916|consen 259 VGFYQ 263 (1283)
T ss_pred cceee
Confidence 98874
No 334
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=90.23 E-value=1.7 Score=26.82 Aligned_cols=63 Identities=22% Similarity=0.190 Sum_probs=36.9
Q ss_pred EEEEEEEecCCCCcEEE-EEeCCCCEEE--EECCCCCEEEEecCCCCeEEEEEECCCCCeEE-EecCCCeE
Q psy6444 18 VVHLAFSDITESGYFLI-SACKDGKPML--RQGDTGDWIGTFEGHKGCVWGVDINKDASKAA-SGAADFQA 84 (88)
Q Consensus 18 v~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d~~i 84 (88)
....+|+ ++|+.++ +...++...+ +|+..+. ...+....+.-..-.|+|+|+.++ +....+.-
T Consensus 240 ~~~P~fs---pDG~~l~f~~~rdg~~~iy~~dl~~~~-~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p 306 (425)
T COG0823 240 NGAPAFS---PDGSKLAFSSSRDGSPDIYLMDLDGKN-LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRP 306 (425)
T ss_pred cCCccCC---CCCCEEEEEECCCCCccEEEEcCCCCc-ceecccCCccccCccCCCCCCEEEEEeCCCCCc
Confidence 3457788 6886554 5566666554 4665444 333433333334678999999886 44444443
No 335
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=89.62 E-value=4.2 Score=26.63 Aligned_cols=56 Identities=5% Similarity=-0.058 Sum_probs=37.7
Q ss_pred EEEEEeCC-CCEEEEECCCCCEEEEec-CCCCeEEEEEE--CCCCCeEEEecCCCeEEEc
Q psy6444 32 FLISACKD-GKPMLRQGDTGDWIGTFE-GHKGCVWGVDI--NKDASKAASGAADFQAKAL 87 (88)
Q Consensus 32 ~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~d~~i~~~ 87 (88)
.++....+ ..+.+||...+.....-. ...+.|..++| .|+++.+++.+....+.++
T Consensus 42 k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~ 101 (631)
T PF12234_consen 42 KIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLY 101 (631)
T ss_pred cEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEE
Confidence 33433444 468899998766443322 34577888877 5688888898888887765
No 336
>PRK02888 nitrous-oxide reductase; Validated
Probab=89.57 E-value=4.3 Score=26.60 Aligned_cols=48 Identities=13% Similarity=0.094 Sum_probs=30.1
Q ss_pred CCEEEEECCC----C-CEEEEecCCCCeEEEEEECCCCCeEEEec-CCCeEEEcC
Q psy6444 40 GKPMLRQGDT----G-DWIGTFEGHKGCVWGVDINKDASKAASGA-ADFQAKALK 88 (88)
Q Consensus 40 ~~~~~~~~~~----~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~~~ 88 (88)
+.+.+.|..+ + ..+..+. -....+.+.++||+.++..++ .+.++.+.|
T Consensus 296 n~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVID 349 (635)
T PRK02888 296 SKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVID 349 (635)
T ss_pred CEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEE
Confidence 4466667665 2 2333333 345668889999999887654 566676654
No 337
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=88.99 E-value=2.7 Score=23.51 Aligned_cols=59 Identities=7% Similarity=0.049 Sum_probs=40.9
Q ss_pred CCCcEEEEEeCCCCEEEEECCCCCEEEEe-------c-------CCCCeEEEEEECCCCCeEEEecCCCeEEEc
Q psy6444 28 ESGYFLISACKDGKPMLRQGDTGDWIGTF-------E-------GHKGCVWGVDINKDASKAASGAADFQAKAL 87 (88)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-------~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 87 (88)
.++.++.....+|.+.+||+.+.+.+..- . .....|....++.+|..+++-+. +....|
T Consensus 20 ~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsn-g~~y~y 92 (219)
T PF07569_consen 20 CNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSN-GDSYSY 92 (219)
T ss_pred eCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeC-CCEEEe
Confidence 46888999999999999999876643221 1 24466777788888887776542 444444
No 338
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=88.14 E-value=3.4 Score=23.67 Aligned_cols=67 Identities=12% Similarity=0.083 Sum_probs=38.1
Q ss_pred CCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCC---------CCeEEEEEECCCCCeEEEecCCCeEEE
Q psy6444 16 RPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGH---------KGCVWGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~i~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
..+..+.++| ..+.+++-...+..+..+|. .+..+..+.-. ..+.-.+++.++|..+++. +.+...+
T Consensus 171 ~d~S~l~~~p--~t~~lliLS~es~~l~~~d~-~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvs-EpNlfy~ 246 (248)
T PF06977_consen 171 RDLSGLSYDP--RTGHLLILSDESRLLLELDR-QGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVS-EPNLFYR 246 (248)
T ss_dssp S---EEEEET--TTTEEEEEETTTTEEEEE-T-T--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEE-TTTEEEE
T ss_pred ccccceEEcC--CCCeEEEEECCCCeEEEECC-CCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEc-CCceEEE
Confidence 4467888997 67778887777888888884 56655444322 2356789999999877765 4455443
No 339
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=88.08 E-value=4.1 Score=24.56 Aligned_cols=71 Identities=11% Similarity=-0.023 Sum_probs=45.7
Q ss_pred CCCCEEEEEEEecCCCCcEEEEEeCC---CCEEEEECCC--CCE--EEEecCCCCeEEEEEECCCCCeEEEec-CCCeEE
Q psy6444 14 HTRPVVHLAFSDITESGYFLISACKD---GKPMLRQGDT--GDW--IGTFEGHKGCVWGVDINKDASKAASGA-ADFQAK 85 (88)
Q Consensus 14 ~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~ 85 (88)
..+...-+.|+ ++++.|+++..+ +.+.-|.++. |+. +............+++++++++++++. ..+.+.
T Consensus 38 ~~~nptyl~~~---~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~ 114 (346)
T COG2706 38 ELGNPTYLAVN---PDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVS 114 (346)
T ss_pred ccCCCceEEEC---CCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEE
Confidence 44566778888 788888877665 5566666654 442 222233334447889999999888776 445565
Q ss_pred Ec
Q psy6444 86 AL 87 (88)
Q Consensus 86 ~~ 87 (88)
++
T Consensus 115 v~ 116 (346)
T COG2706 115 VY 116 (346)
T ss_pred EE
Confidence 53
No 340
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=88.07 E-value=4 Score=25.84 Aligned_cols=28 Identities=21% Similarity=0.343 Sum_probs=23.8
Q ss_pred CCcEEEEEeCCCCEEEEECCCCCEEEEe
Q psy6444 29 SGYFLISACKDGKPMLRQGDTGDWIGTF 56 (88)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 (88)
+..++++.+.|+.+++|++.++..+...
T Consensus 229 ~~~~l~tl~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 229 DDTFLFTLSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp TTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 5678999999999999999988875543
No 341
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=88.05 E-value=3.8 Score=25.96 Aligned_cols=27 Identities=7% Similarity=0.051 Sum_probs=19.1
Q ss_pred eEEEEEECC----CCCeEEEecCCCeEEEcC
Q psy6444 62 CVWGVDINK----DASKAASGAADFQAKALK 88 (88)
Q Consensus 62 ~i~~~~~~~----~~~~~~~~~~d~~i~~~~ 88 (88)
.....+++. +..++++.+.|+.+|+||
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~ 246 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWS 246 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEE
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEE
Confidence 344555555 567888999999999996
No 342
>KOG3621|consensus
Probab=87.09 E-value=5.5 Score=26.38 Aligned_cols=69 Identities=17% Similarity=0.146 Sum_probs=45.1
Q ss_pred CCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC-EEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEc
Q psy6444 16 RPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD-WIGTFEGHKGCVWGVDINKDASKAASGAADFQAKAL 87 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 87 (88)
..+--.+++ ..++.++.|...|.+.+|+-..+. ......+..+.+.....++...+++.++..+.+-++
T Consensus 34 ~~v~lTc~d---st~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ 103 (726)
T KOG3621|consen 34 ARVKLTCVD---ATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVF 103 (726)
T ss_pred ceEEEEEee---cCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEee
Confidence 334444455 678899999999999999765443 223333455566666777777777767766766654
No 343
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=86.86 E-value=3.2 Score=24.72 Aligned_cols=63 Identities=17% Similarity=0.059 Sum_probs=37.5
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEE-ecCC----------------CCeEEEEEECCCCCeEEE
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGT-FEGH----------------KGCVWGVDINKDASKAAS 77 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----------------~~~i~~~~~~~~~~~~~~ 77 (88)
...+....|+ |+|..++.... +.+.+++...+...+. ..+. -+.-..+-|+|++++++.
T Consensus 42 ~~~~~~~~~s---P~g~~~~~v~~-~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~ 117 (353)
T PF00930_consen 42 PPKLQDAKWS---PDGKYIAFVRD-NNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAF 117 (353)
T ss_dssp ETTBSEEEE----SSSTEEEEEET-TEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEE
T ss_pred ccccccceee---cCCCeeEEEec-CceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEE
Confidence 4567788999 78988887764 5788877655532211 1110 122245779999999986
Q ss_pred ecCC
Q psy6444 78 GAAD 81 (88)
Q Consensus 78 ~~~d 81 (88)
...|
T Consensus 118 ~~~d 121 (353)
T PF00930_consen 118 LRFD 121 (353)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 5433
No 344
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=86.70 E-value=4.9 Score=23.98 Aligned_cols=57 Identities=12% Similarity=-0.052 Sum_probs=29.0
Q ss_pred CcEEEEEeCCCCEEEEECCCCCEEEEecCCCC-eEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 30 GYFLISACKDGKPMLRQGDTGDWIGTFEGHKG-CVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
++.++.+..++.+..++..+++.+-....... ....... .+..+..++.++.+.++|
T Consensus 279 ~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d 336 (377)
T TIGR03300 279 DNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLS 336 (377)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEE
Confidence 34555566677777777776665433321111 1111111 234555666777766653
No 345
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=86.57 E-value=7.5 Score=25.96 Aligned_cols=68 Identities=16% Similarity=0.079 Sum_probs=44.6
Q ss_pred CEEEEEEEecCCCCcEEEEEeCCCCEEEEECCC----------CC-EE--EEe--------cCCCCeEEEEEECCC---C
Q psy6444 17 PVVHLAFSDITESGYFLISACKDGKPMLRQGDT----------GD-WI--GTF--------EGHKGCVWGVDINKD---A 72 (88)
Q Consensus 17 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~--~~~--------~~~~~~i~~~~~~~~---~ 72 (88)
.|..+..+ ++|..++-.+..+...+. ++. +. .+ +.+ ......|..+.|+|. +
T Consensus 86 ~v~~i~~n---~~g~~lal~G~~~v~V~~-LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~ 161 (717)
T PF10168_consen 86 EVHQISLN---PTGSLLALVGPRGVVVLE-LPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESD 161 (717)
T ss_pred eEEEEEEC---CCCCEEEEEcCCcEEEEE-eccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCC
Confidence 46677788 799999888887654432 221 11 11 111 123457788999996 4
Q ss_pred CeEEEecCCCeEEEcC
Q psy6444 73 SKAASGAADFQAKALK 88 (88)
Q Consensus 73 ~~~~~~~~d~~i~~~~ 88 (88)
..++.-..|+.+|+||
T Consensus 162 ~~l~vLtsdn~lR~y~ 177 (717)
T PF10168_consen 162 SHLVVLTSDNTLRLYD 177 (717)
T ss_pred CeEEEEecCCEEEEEe
Confidence 6777778999999986
No 346
>KOG1645|consensus
Probab=85.78 E-value=4.1 Score=25.22 Aligned_cols=40 Identities=3% Similarity=0.044 Sum_probs=28.6
Q ss_pred EEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC
Q psy6444 9 LTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD 51 (88)
Q Consensus 9 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 51 (88)
.++..+ ..++.++|.- .+...++.|..+|.|.+||++..+
T Consensus 230 ssy~a~-~~~wSC~wDl--de~h~IYaGl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 230 SSYIAY-NQIWSCCWDL--DERHVIYAGLQNGMVLVYDMRQPE 269 (463)
T ss_pred eheecc-CCceeeeecc--CCcceeEEeccCceEEEEEccCCC
Confidence 333444 5678889984 334678888889999999997543
No 347
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=84.74 E-value=3.6 Score=20.63 Aligned_cols=65 Identities=18% Similarity=0.169 Sum_probs=38.1
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEE---CCCCC-eEEEecCCCeEEE
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDI---NKDAS-KAASGAADFQAKA 86 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~-~~~~~~~d~~i~~ 86 (88)
+..+..+.-. .+..++.+..+|+|-+|+-....+ ..+. +..+.++.+ ..+|. -++++..+|.+-+
T Consensus 42 ~~~v~~L~~~----~~~~F~Y~l~NGTVGvY~~~~RlW--RiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 42 TDKVTSLCSL----GGGRFAYALANGTVGVYDRSQRLW--RIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred ccceEEEEEc----CCCEEEEEecCCEEEEEeCcceee--eecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence 3556666554 457789999999999997633222 2222 233444433 22333 5667878887643
No 348
>KOG2114|consensus
Probab=84.66 E-value=4.4 Score=27.47 Aligned_cols=60 Identities=17% Similarity=0.045 Sum_probs=37.3
Q ss_pred CCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCe-EEEEEECCCCCeEEEecCCC-----eEEEcC
Q psy6444 28 ESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGC-VWGVDINKDASKAASGAADF-----QAKALK 88 (88)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~d~-----~i~~~~ 88 (88)
+.+..++-|..+|.|.+.+-. -..+..++.+... +..+-...+...+++.+.|. .+++|+
T Consensus 33 s~~~~vvigt~~G~V~~Ln~s-~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~ 98 (933)
T KOG2114|consen 33 SSTGSVVIGTADGRVVILNSS-FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWD 98 (933)
T ss_pred CCCceEEEeeccccEEEeccc-ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEec
Confidence 678889999999998876542 2334677766655 33333222335666655443 477885
No 349
>PRK02888 nitrous-oxide reductase; Validated
Probab=83.76 E-value=10 Score=25.03 Aligned_cols=67 Identities=12% Similarity=-0.066 Sum_probs=44.3
Q ss_pred EEEEEEEecCCCCcEEEEEeC-CCCEEEEECCCCCE------------EEEecCCCCeEEEEEECCCCCeEEEecCCCeE
Q psy6444 18 VVHLAFSDITESGYFLISACK-DGKPMLRQGDTGDW------------IGTFEGHKGCVWGVDINKDASKAASGAADFQA 84 (88)
Q Consensus 18 v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 84 (88)
...+.++ ++|++++.++. +..+.+.|+.+... ...... ...-.+.+|.++|..+-|---|..+
T Consensus 323 PHGV~vS---PDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsqv 398 (635)
T PRK02888 323 PHGVNTS---PDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQI 398 (635)
T ss_pred ccceEEC---CCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeecc-CCCcceEEECCCCCEEEeEeeccee
Confidence 3457778 79987765554 77899999876432 222222 2233566888888877777778888
Q ss_pred EEcC
Q psy6444 85 KALK 88 (88)
Q Consensus 85 ~~~~ 88 (88)
-.||
T Consensus 399 ~kwn 402 (635)
T PRK02888 399 VKWN 402 (635)
T ss_pred EEEe
Confidence 7775
No 350
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=82.85 E-value=6.5 Score=22.16 Aligned_cols=48 Identities=15% Similarity=0.038 Sum_probs=34.3
Q ss_pred cEEEEEeCCCCEEEEECCCC--CEEEEecCCCCeEEEEEECCCCCeEEEec
Q psy6444 31 YFLISACKDGKPMLRQGDTG--DWIGTFEGHKGCVWGVDINKDASKAASGA 79 (88)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 79 (88)
+.++.+.....|..|++... ..+..+.. -+.|..+.++..|+++++--
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~T-v~~V~~l~y~~~GDYlvTlE 78 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFST-VGRVLQLVYSEAGDYLVTLE 78 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcc-hhheeEEEeccccceEEEEE
Confidence 56655555667999998732 34455553 47888999999999998843
No 351
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=82.35 E-value=5.8 Score=25.32 Aligned_cols=58 Identities=19% Similarity=0.259 Sum_probs=39.2
Q ss_pred CCEEEEEEEecCCCCcEEEEEeCCC---------------CEEEEECCCCCEEEEecCCCCe--EE-EEEECCCCCeEE
Q psy6444 16 RPVVHLAFSDITESGYFLISACKDG---------------KPMLRQGDTGDWIGTFEGHKGC--VW-GVDINKDASKAA 76 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~--i~-~~~~~~~~~~~~ 76 (88)
..|..+.|+ |++.+|.+-...+ .+.+||..++..+..+.+.... .+ .+.|+.+..+.+
T Consensus 72 ~~V~~~~fS---P~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~A 147 (561)
T COG5354 72 PDVKYLDFS---PNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVA 147 (561)
T ss_pred CCceecccC---cccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhh
Confidence 456677888 6888888755433 3889999888888777664433 44 566776655444
No 352
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=82.31 E-value=6.7 Score=21.91 Aligned_cols=69 Identities=19% Similarity=0.150 Sum_probs=41.9
Q ss_pred CCEEEEEEEecCCCCcEEE-EEeCCCCEEEEECCC-CC------EEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEc
Q psy6444 16 RPVVHLAFSDITESGYFLI-SACKDGKPMLRQGDT-GD------WIGTFEGHKGCVWGVDINKDASKAASGAADFQAKAL 87 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 87 (88)
....-++|+ ++++.++ +-+..+.|..+++.. +. ....+....+..-.+++..+++.+++....+.|.++
T Consensus 134 ~~pNGi~~s---~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~ 210 (246)
T PF08450_consen 134 GFPNGIAFS---PDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVF 210 (246)
T ss_dssp SSEEEEEEE---TTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEE
T ss_pred ccccceEEC---CcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEE
Confidence 334568899 7887665 556666777777642 22 111223333456778888889877776666666655
No 353
>PRK13616 lipoprotein LpqB; Provisional
Probab=81.32 E-value=12 Score=24.36 Aligned_cols=61 Identities=10% Similarity=0.041 Sum_probs=34.5
Q ss_pred EEEEEEEecCCCCcEEEEEeCCCCE-EE-----------EECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEE
Q psy6444 18 VVHLAFSDITESGYFLISACKDGKP-ML-----------RQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK 85 (88)
Q Consensus 18 v~~~~~~~~~~~~~~~~~~~~~~~~-~~-----------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 85 (88)
.....|+ ++|+++........+ .+ .++..+.. .. ...+.|..++|+|||..++-.. ++.+.
T Consensus 399 ~t~PsWs---pDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~-~~--~~~g~Issl~wSpDG~RiA~i~-~g~v~ 471 (591)
T PRK13616 399 LTRPSWS---LDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAV-AS--RVPGPISELQLSRDGVRAAMII-GGKVY 471 (591)
T ss_pred CCCceEC---CCCCceEEEecCcceEEEeccCCCceEEEEeccCchh-hh--ccCCCcCeEEECCCCCEEEEEE-CCEEE
Confidence 6678899 788776665433222 12 12221111 11 2245689999999999887543 24443
No 354
>KOG4649|consensus
Probab=81.14 E-value=9 Score=22.63 Aligned_cols=49 Identities=18% Similarity=0.055 Sum_probs=31.8
Q ss_pred CCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECC-CCCeEE
Q psy6444 28 ESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINK-DASKAA 76 (88)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~ 76 (88)
+++..+..++.|+.....|..+...+.+.+-..+-..+..+.+ ++.+++
T Consensus 103 ~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~ 152 (354)
T KOG4649|consen 103 FDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYA 152 (354)
T ss_pred CCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEE
Confidence 6788999999999998888877766665443323223334455 444443
No 355
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=81.09 E-value=10 Score=25.42 Aligned_cols=36 Identities=14% Similarity=0.114 Sum_probs=29.4
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCC
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTG 50 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 50 (88)
...|..+.|+|.+.++..++.-..|+.+++|++...
T Consensus 146 ~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 146 SLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred CceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCC
Confidence 356889999976556788998899999999998653
No 356
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=80.78 E-value=9.3 Score=22.55 Aligned_cols=68 Identities=16% Similarity=0.149 Sum_probs=40.5
Q ss_pred EEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeE-----EEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 18 VVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCV-----WGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 18 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-----~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
+.++... .+|.+|+|...-..|.+.+-.+++.+-.+.+..+.- ...++-++-+.+-....++.|.++|
T Consensus 146 iNsV~~~---~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFD 218 (299)
T PF14269_consen 146 INSVDKD---DDGDYLISSRNTSTIYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFD 218 (299)
T ss_pred eeeeeec---CCccEEEEecccCEEEEEECCCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEc
Confidence 3445555 688899998887778777877777666665441111 1133444444443445666777765
No 357
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=80.06 E-value=9.1 Score=22.01 Aligned_cols=74 Identities=11% Similarity=0.007 Sum_probs=41.0
Q ss_pred EEecCCCCCEEEEEEEecCCCCc-EEEEEeCCCCEEEEECCCCCEEEEecCC-CCeEEEEEECCCCCeEEEecCCCeEEE
Q psy6444 9 LTCSGHTRPVVHLAFSDITESGY-FLISACKDGKPMLRQGDTGDWIGTFEGH-KGCVWGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 9 ~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
+.+.+-...++.++|. ++.+ +++.....+.+..++. .++.++.+.-. .+-.-.+++..++.++++.-.++.+.+
T Consensus 15 ~~l~g~~~e~SGLTy~---pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~ 90 (248)
T PF06977_consen 15 KPLPGILDELSGLTYN---PDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYI 90 (248)
T ss_dssp EE-TT--S-EEEEEEE---TTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEE
T ss_pred eECCCccCCccccEEc---CCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEE
Confidence 3556666679999999 5655 4555555566666675 47777666433 244556677666766666555666544
No 358
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=79.78 E-value=11 Score=22.57 Aligned_cols=59 Identities=17% Similarity=0.217 Sum_probs=37.4
Q ss_pred CCCEEEEEEEecCCCCcEEEE-EeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEec
Q psy6444 15 TRPVVHLAFSDITESGYFLIS-ACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGA 79 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 79 (88)
.+.+.+|+++ .++..++. +-..+.+.+||..++..+....-. .+..++...++ ++++.+
T Consensus 216 ~~Y~gSIa~~---~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l~--D~cGva~~~~~-f~~ssG 275 (305)
T PF07433_consen 216 NGYIGSIAAD---RDGRLIAVTSPRGGRVAVWDAATGRLLGSVPLP--DACGVAPTDDG-FLVSSG 275 (305)
T ss_pred CCceEEEEEe---CCCCEEEEECCCCCEEEEEECCCCCEeeccccC--ceeeeeecCCc-eEEeCC
Confidence 3567889999 78876654 444567889999988876555432 33444444444 444443
No 359
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=79.47 E-value=11 Score=22.60 Aligned_cols=55 Identities=22% Similarity=0.253 Sum_probs=39.6
Q ss_pred EEEecCCCCcEEEEEeCC-----CCEEEEECCCCC-EEEEecCCCCeEEEEEECCCCCeEEEec
Q psy6444 22 AFSDITESGYFLISACKD-----GKPMLRQGDTGD-WIGTFEGHKGCVWGVDINKDASKAASGA 79 (88)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 79 (88)
.|+ ++|.+|+..=+| |.|=+||...+. .+..+..|.-.-..+.+.+||+.++.+.
T Consensus 120 vfs---~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan 180 (366)
T COG3490 120 VFS---PDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN 180 (366)
T ss_pred ccC---CCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeC
Confidence 467 788888865443 456688887543 5677777777778889999999887543
No 360
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=78.29 E-value=12 Score=22.37 Aligned_cols=43 Identities=21% Similarity=0.295 Sum_probs=30.6
Q ss_pred cCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEec
Q psy6444 12 SGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFE 57 (88)
Q Consensus 12 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 57 (88)
.+-+..++.+.|+ ++.+.+++..+...-.++-...|..++.+.
T Consensus 82 ~g~~~nvS~LTyn---p~~rtLFav~n~p~~iVElt~~GdlirtiP 124 (316)
T COG3204 82 LGETANVSSLTYN---PDTRTLFAVTNKPAAIVELTKEGDLIRTIP 124 (316)
T ss_pred ccccccccceeeC---CCcceEEEecCCCceEEEEecCCceEEEec
Confidence 4445668999999 788888888777766565445577666654
No 361
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=78.15 E-value=13 Score=22.57 Aligned_cols=56 Identities=13% Similarity=0.099 Sum_probs=34.2
Q ss_pred CcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEE-EEECCCCCeEEEecCCCeEEEc
Q psy6444 30 GYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWG-VDINKDASKAASGAADFQAKAL 87 (88)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~d~~i~~~ 87 (88)
+..++.+..++.+...+..+++.+.........+.. ..+ .+..+..++.|+.+..+
T Consensus 335 ~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~--~~~~l~v~t~~G~l~~~ 391 (394)
T PRK11138 335 NGYLVVGDSEGYLHWINREDGRFVAQQKVDSSGFLSEPVV--ADDKLLIQARDGTVYAI 391 (394)
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCcceeCCEE--ECCEEEEEeCCceEEEE
Confidence 445667788888888898888876665433222322 122 23355566788877654
No 362
>KOG2066|consensus
Probab=77.91 E-value=19 Score=24.52 Aligned_cols=61 Identities=13% Similarity=0.133 Sum_probs=39.9
Q ss_pred EecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeE------EEEEECCCCCeEE
Q psy6444 10 TCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCV------WGVDINKDASKAA 76 (88)
Q Consensus 10 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i------~~~~~~~~~~~~~ 76 (88)
.+....++|.++.|. |.+++=++..| +++||...+..+..++.....+ ..+.|.+..++++
T Consensus 155 ~l~~~eG~I~~i~W~-----g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LVI 221 (846)
T KOG2066|consen 155 VLSEGEGPIHSIKWR-----GNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLVI 221 (846)
T ss_pred eeecCccceEEEEec-----CcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeEEE
Confidence 345567899999997 77888777665 8889988777666554432222 3456665555443
No 363
>KOG1916|consensus
Probab=77.85 E-value=7.5 Score=26.95 Aligned_cols=21 Identities=24% Similarity=0.094 Sum_probs=18.8
Q ss_pred CCCcEEEEEeCCCCEEEEECC
Q psy6444 28 ESGYFLISACKDGKPMLRQGD 48 (88)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~ 48 (88)
++|..++.+..||.+.+|.+.
T Consensus 245 pDGtv~a~a~~dG~v~f~Qiy 265 (1283)
T KOG1916|consen 245 PDGTVFAWAISDGSVGFYQIY 265 (1283)
T ss_pred CCCcEEEEeecCCccceeeee
Confidence 899999999999999998764
No 364
>KOG2377|consensus
Probab=77.74 E-value=16 Score=23.49 Aligned_cols=35 Identities=14% Similarity=0.022 Sum_probs=27.8
Q ss_pred EEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEc
Q psy6444 53 IGTFEGHKGCVWGVDINKDASKAASGAADFQAKAL 87 (88)
Q Consensus 53 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 87 (88)
+.-.....+.|.++.|++|...++....++++.++
T Consensus 59 iSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~ 93 (657)
T KOG2377|consen 59 ISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFC 93 (657)
T ss_pred ceeeecCCCceeEEEeccCcceEEEEecCceEEEE
Confidence 33344567799999999999999988888887765
No 365
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=77.73 E-value=12 Score=22.20 Aligned_cols=67 Identities=7% Similarity=0.056 Sum_probs=33.2
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEE
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAK 85 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 85 (88)
.+.+..+..+ ++|.+++.+.......-|+-........-.....++..+.|.+++.+.+.+ ..+.++
T Consensus 144 ~gs~~~~~r~---~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~ 210 (302)
T PF14870_consen 144 SGSINDITRS---SDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQ 210 (302)
T ss_dssp ---EEEEEE----TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEE
T ss_pred cceeEeEEEC---CCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEE
Confidence 3556666666 788776666544444456654333333333355889999999998865543 555554
No 366
>KOG3617|consensus
Probab=77.13 E-value=6 Score=27.27 Aligned_cols=34 Identities=26% Similarity=0.388 Sum_probs=30.3
Q ss_pred cCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECC
Q psy6444 12 SGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGD 48 (88)
Q Consensus 12 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 48 (88)
..|+.++.-++|+ ++|..+.++..-|.+.+|...
T Consensus 98 ~th~a~i~~l~wS---~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 98 ETHPAPIQGLDWS---HDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred cCCCCCceeEEec---CCCCeEEEcCCCceeEEEEee
Confidence 3488899999999 899999999999999999765
No 367
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=76.65 E-value=3.8 Score=15.79 Aligned_cols=30 Identities=17% Similarity=0.081 Sum_probs=18.5
Q ss_pred CCcEEE-EEeCCCCEEEEECCCCCEEEEecC
Q psy6444 29 SGYFLI-SACKDGKPMLRQGDTGDWIGTFEG 58 (88)
Q Consensus 29 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 58 (88)
+++.++ +...++.+.++|..+...+..+..
T Consensus 2 d~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 2 DGTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 454444 444567788888876666555543
No 368
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=75.38 E-value=3.6 Score=14.83 Aligned_cols=23 Identities=13% Similarity=0.354 Sum_probs=12.1
Q ss_pred EEEEECCCCCeEEEecCCCeEEE
Q psy6444 64 WGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 64 ~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
..++..+++..+++=.....+.+
T Consensus 5 ~gvav~~~g~i~VaD~~n~rV~v 27 (28)
T PF01436_consen 5 HGVAVDSDGNIYVADSGNHRVQV 27 (28)
T ss_dssp EEEEEETTSEEEEEECCCTEEEE
T ss_pred cEEEEeCCCCEEEEECCCCEEEE
Confidence 44555555665555455555544
No 369
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=75.26 E-value=11 Score=20.21 Aligned_cols=26 Identities=8% Similarity=-0.156 Sum_probs=19.6
Q ss_pred eEEEEEECCCCC------eEEEecCCCeEEEc
Q psy6444 62 CVWGVDINKDAS------KAASGAADFQAKAL 87 (88)
Q Consensus 62 ~i~~~~~~~~~~------~~~~~~~d~~i~~~ 87 (88)
.+..++|+|.|- .++....++.+.+|
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~ 118 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLY 118 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEE
Confidence 788899999533 55667788888876
No 370
>KOG4499|consensus
Probab=74.48 E-value=15 Score=21.48 Aligned_cols=44 Identities=9% Similarity=0.062 Sum_probs=37.4
Q ss_pred CCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCC
Q psy6444 28 ESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKD 71 (88)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 71 (88)
.+|.+.++..+.+.+..+|..+++.+..++--..++.+.+|-..
T Consensus 221 ~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgGk 264 (310)
T KOG4499|consen 221 TEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGGK 264 (310)
T ss_pred cCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEecCC
Confidence 67888888888889999999999998888887888888888554
No 371
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=73.24 E-value=7.4 Score=21.32 Aligned_cols=29 Identities=24% Similarity=0.287 Sum_probs=21.4
Q ss_pred CCcEEEEEeCCCCEEEEECCCCCEEEEec
Q psy6444 29 SGYFLISACKDGKPMLRQGDTGDWIGTFE 57 (88)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 57 (88)
.+..++.+..++.+..+|..+++.+-...
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~ 63 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFD 63 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEee
Confidence 45666767788889999998888665444
No 372
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=72.87 E-value=28 Score=24.19 Aligned_cols=69 Identities=10% Similarity=0.055 Sum_probs=40.2
Q ss_pred cceeEEe-cCCCCCEEEEEEEecCCCCcEEEE-EeCCC-----CEEEEECCCC-CEEEEecCCCCeEEEEEECCCCCeEE
Q psy6444 5 RQIPLTC-SGHTRPVVHLAFSDITESGYFLIS-ACKDG-----KPMLRQGDTG-DWIGTFEGHKGCVWGVDINKDASKAA 76 (88)
Q Consensus 5 ~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~ 76 (88)
+...+.+ ..++.++...+|+ |+|+.++. .+-.+ .|.+.++.+. .-+.++......|..-+..+.|...+
T Consensus 338 G~n~~~ve~~~~~~i~sP~~S---PDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aaiprwrv~e~gdt~i 414 (912)
T TIGR02171 338 KGASRAVEIEDTISVYHPDIS---PDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAAIPRWRVLENGDTVI 414 (912)
T ss_pred CCCceEEEecCCCceecCcCC---CCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccccccceEecCCCCeEE
Confidence 3333334 4467788889999 79988877 43333 3566666543 23344444455665555566666443
No 373
>KOG1008|consensus
Probab=72.26 E-value=0.92 Score=29.52 Aligned_cols=64 Identities=6% Similarity=0.012 Sum_probs=39.9
Q ss_pred EEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECC-CCCeEEEecCCCeEEEcC
Q psy6444 20 HLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINK-DASKAASGAADFQAKALK 88 (88)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~~~~ 88 (88)
.++|- .+.+.+.+|.....+.++|++... .......+..+..+...| .+.++++ ..|+.+.+||
T Consensus 159 s~cwl---rd~klvlaGm~sr~~~ifdlRqs~-~~~~svnTk~vqG~tVdp~~~nY~cs-~~dg~iAiwD 223 (783)
T KOG1008|consen 159 SVCWL---RDTKLVLAGMTSRSVHIFDLRQSL-DSVSSVNTKYVQGITVDPFSPNYFCS-NSDGDIAIWD 223 (783)
T ss_pred ccccc---cCcchhhcccccchhhhhhhhhhh-hhhhhhhhhhcccceecCCCCCceec-cccCceeecc
Confidence 55565 567778888877788888876322 122222334555566666 5555544 4588899987
No 374
>KOG2280|consensus
Probab=71.67 E-value=17 Score=24.61 Aligned_cols=46 Identities=13% Similarity=0.083 Sum_probs=33.3
Q ss_pred CEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 41 KPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
.+++|+.. |..+..+....+.+.++.|+.+.. +++...+|++.+++
T Consensus 65 ~I~If~~s-G~lL~~~~w~~~~lI~mgWs~~ee-LI~v~k~g~v~Vy~ 110 (829)
T KOG2280|consen 65 YIRIFNIS-GQLLGRILWKHGELIGMGWSDDEE-LICVQKDGTVHVYG 110 (829)
T ss_pred eEEEEecc-ccchHHHHhcCCCeeeecccCCce-EEEEeccceEEEee
Confidence 46677663 666666666666888899997655 56778899988874
No 375
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=70.97 E-value=21 Score=21.74 Aligned_cols=54 Identities=19% Similarity=0.140 Sum_probs=33.6
Q ss_pred EEEEEecCCCCcEEEEE-eCCC----CEEEEECCCCCEEEE-ecCCCCeEEEEEECCCCCeEEEe
Q psy6444 20 HLAFSDITESGYFLISA-CKDG----KPMLRQGDTGDWIGT-FEGHKGCVWGVDINKDASKAASG 78 (88)
Q Consensus 20 ~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~ 78 (88)
...++ ++++.++.+ +..| .+.++|+.++..+.. +..... ..+.|.+++..+.-.
T Consensus 128 ~~~~S---pdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~--~~~~W~~d~~~~~y~ 187 (414)
T PF02897_consen 128 GFSVS---PDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKF--SSVSWSDDGKGFFYT 187 (414)
T ss_dssp EEEET---TTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEES--EEEEECTTSSEEEEE
T ss_pred eeeEC---CCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccccc--ceEEEeCCCCEEEEE
Confidence 45566 788876643 4444 488999988865432 222211 238999998876643
No 376
>KOG1008|consensus
Probab=70.20 E-value=4.4 Score=26.71 Aligned_cols=69 Identities=9% Similarity=0.028 Sum_probs=39.1
Q ss_pred CEEEEEEEecCCCCcEEEEEeCCCCEEEEEC-CCCC-EEEEecC----CCCeEEEEEECCCCCe-EEEec-CCCeEEEcC
Q psy6444 17 PVVHLAFSDITESGYFLISACKDGKPMLRQG-DTGD-WIGTFEG----HKGCVWGVDINKDASK-AASGA-ADFQAKALK 88 (88)
Q Consensus 17 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~----~~~~i~~~~~~~~~~~-~~~~~-~d~~i~~~~ 88 (88)
.+..+...| -.++++++.. ++.+-+||- .+-+ .+..+.. ...++..++|.|...- +++.. ..++|+.+|
T Consensus 197 ~vqG~tVdp--~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlyd 273 (783)
T KOG1008|consen 197 YVQGITVDP--FSPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYD 273 (783)
T ss_pred hcccceecC--CCCCceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEec
Confidence 344455564 4667766655 889999993 3222 2222222 2346888999996442 33333 445677654
No 377
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=68.31 E-value=20 Score=20.38 Aligned_cols=57 Identities=11% Similarity=-0.054 Sum_probs=32.4
Q ss_pred CCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEc
Q psy6444 28 ESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQAKAL 87 (88)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 87 (88)
..++.++.|..+| +.+++............ ...|..+...++-..++.-+ |+.+.++
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~-~~~I~ql~vl~~~~~llvLs-d~~l~~~ 61 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRILK-LSSITQLSVLPELNLLLVLS-DGQLYVY 61 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEee-cceEEEEEEecccCEEEEEc-CCccEEE
Confidence 4567888888888 77777732222222221 12277777777666555433 3666554
No 378
>KOG3630|consensus
Probab=67.93 E-value=6.4 Score=27.85 Aligned_cols=65 Identities=6% Similarity=-0.102 Sum_probs=36.1
Q ss_pred EEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC-EEEEecCCCCeEEEEEECCCCCeEEEecCCCeEEE
Q psy6444 19 VHLAFSDITESGYFLISACKDGKPMLRQGDTGD-WIGTFEGHKGCVWGVDINKDASKAASGAADFQAKA 86 (88)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 86 (88)
.++.|+| .-....+....|..+.+..+.... ....+ .-.....+++|+|.|.+++-+-..|++..
T Consensus 159 ~~~~wnP--~vp~n~av~l~dlsl~V~~~~~~~~~v~s~-p~t~~~Tav~WSprGKQl~iG~nnGt~vQ 224 (1405)
T KOG3630|consen 159 LKNVWNP--LVPLNSAVDLSDLSLRVKSTKQLAQNVTSF-PVTNSQTAVLWSPRGKQLFIGRNNGTEVQ 224 (1405)
T ss_pred ccccccC--Cccchhhhhccccchhhhhhhhhhhhhccc-CcccceeeEEeccccceeeEecCCCeEEE
Confidence 3455664 222334444555555554432211 11111 13456789999999999887777776653
No 379
>KOG1920|consensus
Probab=67.68 E-value=34 Score=24.66 Aligned_cols=33 Identities=18% Similarity=0.242 Sum_probs=24.6
Q ss_pred CEEEEEEEecCCCCcEEEE---EeCCCCEEEEECCCCCE
Q psy6444 17 PVVHLAFSDITESGYFLIS---ACKDGKPMLRQGDTGDW 52 (88)
Q Consensus 17 ~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 52 (88)
++..++|+ .++..++. ......+.+|...+-.+
T Consensus 291 ~ve~L~Wn---s~sdiLAv~~~~~e~~~v~lwt~~NyhW 326 (1265)
T KOG1920|consen 291 EVEELAWN---SNSDILAVVTSNLENSLVQLWTTGNYHW 326 (1265)
T ss_pred chheeeec---CCCCceeeeecccccceEEEEEecCeEE
Confidence 37889999 88888887 44455699998876543
No 380
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=65.66 E-value=41 Score=23.13 Aligned_cols=82 Identities=10% Similarity=-0.016 Sum_probs=45.5
Q ss_pred ccceeEEecCCCCC-EEEEEEEecC----CCCcEEEEEeCCCCEEEEECCCCC--EEE-Ee--cCCCCeEEEEEECCCCC
Q psy6444 4 IRQIPLTCSGHTRP-VVHLAFSDIT----ESGYFLISACKDGKPMLRQGDTGD--WIG-TF--EGHKGCVWGVDINKDAS 73 (88)
Q Consensus 4 ~~~~~~~~~~~~~~-v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~--~~~~~~i~~~~~~~~~~ 73 (88)
.|+.+.....+... |..+ .|.+ .+.+.-+.|-.+..+..||.+-.. .+. .. ........+++-+.+|.
T Consensus 513 ~GKVV~eW~~~~~~~v~~~--~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~G~ 590 (794)
T PF08553_consen 513 RGKVVEEWKVHDDIPVVDI--APDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATTEDGY 590 (794)
T ss_pred CCcEEEEeecCCCcceeEe--cccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCceEEEecCCce
Confidence 45566666655433 4443 3210 123344556667788888876432 221 11 11234455666565555
Q ss_pred eEEEecCCCeEEEcC
Q psy6444 74 KAASGAADFQAKALK 88 (88)
Q Consensus 74 ~~~~~~~d~~i~~~~ 88 (88)
++.++.+|.||+||
T Consensus 591 -iavgs~~G~IRLyd 604 (794)
T PF08553_consen 591 -IAVGSNKGDIRLYD 604 (794)
T ss_pred -EEEEeCCCcEEeec
Confidence 77889999999986
No 381
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=63.60 E-value=33 Score=21.29 Aligned_cols=38 Identities=21% Similarity=0.398 Sum_probs=28.2
Q ss_pred CCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEe
Q psy6444 16 RPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTF 56 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 (88)
+++..++.+ ++++.++.-..++.+.+.+.+-.+.+..+
T Consensus 217 ~~i~~iavS---png~~iAl~t~~g~l~v~ssDf~~~~~e~ 254 (410)
T PF04841_consen 217 GPIIKIAVS---PNGKFIALFTDSGNLWVVSSDFSEKLCEF 254 (410)
T ss_pred CCeEEEEEC---CCCCEEEEEECCCCEEEEECcccceeEEe
Confidence 578889999 79999998888888888765544433333
No 382
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=63.26 E-value=29 Score=20.49 Aligned_cols=39 Identities=18% Similarity=0.245 Sum_probs=25.1
Q ss_pred CCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEe
Q psy6444 40 GKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASG 78 (88)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 78 (88)
..+++||..+..+..--.+-.+.|..+.|.-+..+++.+
T Consensus 16 ~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G 54 (281)
T PF12768_consen 16 PGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGG 54 (281)
T ss_pred CEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEE
Confidence 458888887665544444455678888887555555554
No 383
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=62.11 E-value=34 Score=20.93 Aligned_cols=46 Identities=9% Similarity=-0.005 Sum_probs=29.9
Q ss_pred EEEEECCCCCEEEEecCCCCeEEEEEECCCCC-eEEE-ecCCCeEEEcC
Q psy6444 42 PMLRQGDTGDWIGTFEGHKGCVWGVDINKDAS-KAAS-GAADFQAKALK 88 (88)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~-~~~d~~i~~~~ 88 (88)
|.++|..+++++..+... ..+.++..+.+.. ++.. ...++.+.++|
T Consensus 271 VWv~D~~t~krv~Ri~l~-~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D 318 (342)
T PF06433_consen 271 VWVYDLKTHKRVARIPLE-HPIDSIAVSQDDKPLLYALSAGDGTLDVYD 318 (342)
T ss_dssp EEEEETTTTEEEEEEEEE-EEESEEEEESSSS-EEEEEETTTTEEEEEE
T ss_pred EEEEECCCCeEEEEEeCC-CccceEEEccCCCcEEEEEcCCCCeEEEEe
Confidence 555677778877777642 3466777777655 3333 34678888875
No 384
>KOG2395|consensus
Probab=61.93 E-value=41 Score=22.12 Aligned_cols=52 Identities=6% Similarity=-0.003 Sum_probs=27.7
Q ss_pred EeCCCCEEEEECCCC-C-EEEEecCC----CCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 36 ACKDGKPMLRQGDTG-D-WIGTFEGH----KGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 36 ~~~~~~~~~~~~~~~-~-~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
|..+..+.-||.+-. . .+..-+++ .....+.+-..+ -+++.++.+|.||+||
T Consensus 400 GLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT~s-G~IvvgS~~GdIRLYd 457 (644)
T KOG2395|consen 400 GLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATTES-GYIVVGSLKGDIRLYD 457 (644)
T ss_pred eecCCceEEecccccCcceeeeeeccccccccccceeeecCC-ceEEEeecCCcEEeeh
Confidence 555667777776522 2 12222222 122223332333 3577889999999986
No 385
>PRK13616 lipoprotein LpqB; Provisional
Probab=61.08 E-value=45 Score=22.00 Aligned_cols=58 Identities=21% Similarity=0.155 Sum_probs=33.3
Q ss_pred CEEEEEEEecCCCCcEEEEEe------CCCCEEEEECCC-CCEEEEecCCCCeEEEEEECCCCCeEEEec
Q psy6444 17 PVVHLAFSDITESGYFLISAC------KDGKPMLRQGDT-GDWIGTFEGHKGCVWGVDINKDASKAASGA 79 (88)
Q Consensus 17 ~v~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 79 (88)
.+...+.+ ++|+.++... .+..-.+|-... +.......+ .......|+|++..++...
T Consensus 351 ~vsspaiS---pdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~g--~~~t~PsWspDG~~lw~v~ 415 (591)
T PRK13616 351 NITSAALS---RSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLEG--HSLTRPSWSLDADAVWVVV 415 (591)
T ss_pred CcccceEC---CCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeecC--CCCCCceECCCCCceEEEe
Confidence 45667788 7888777655 244444554322 222222222 2367789999988776654
No 386
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=60.87 E-value=41 Score=21.44 Aligned_cols=51 Identities=18% Similarity=0.070 Sum_probs=31.8
Q ss_pred CcEEEEEeCCCCEEEEECCCC------CEEEEecCCCCeEEEEEECCCC-CeEEEecCC
Q psy6444 30 GYFLISACKDGKPMLRQGDTG------DWIGTFEGHKGCVWGVDINKDA-SKAASGAAD 81 (88)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d 81 (88)
+.+|+.+.+.+.+....+... .....+.. .++++.++..||+ ..++.....
T Consensus 369 g~llv~~L~~~~l~r~~l~~~~~~v~~~~~~~~~~-~~RiRdv~~~pDg~~iy~~td~~ 426 (454)
T TIGR03606 369 NSLLIPSLKRGVIYRIKLDPDYSTVYGDAVPMFKT-NNRYRDVIASPDGNVLYVATDNF 426 (454)
T ss_pred CCEEEEEcCCCeEEEEEecCCcceecceeEEeecC-CCeeEEEEECCCCCEEEEEEcCC
Confidence 567777777777766666433 11223333 5799999999997 544433333
No 387
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=59.90 E-value=41 Score=21.16 Aligned_cols=33 Identities=9% Similarity=-0.088 Sum_probs=23.3
Q ss_pred ecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 56 FEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 56 ~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
+......+..+..+|.+.+.+..-.-|+|.++|
T Consensus 303 l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD 335 (415)
T PF14655_consen 303 LPDSKREGESICLSPSGRLAAVTDSLGRVLLID 335 (415)
T ss_pred eccCCceEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 344456778899999988777765556776665
No 388
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=58.57 E-value=10 Score=13.69 Aligned_cols=22 Identities=18% Similarity=0.286 Sum_probs=15.4
Q ss_pred EEEEEeCCCCEEEEECCCCCEE
Q psy6444 32 FLISACKDGKPMLRQGDTGDWI 53 (88)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~ 53 (88)
.++.+..++.+.-++..+++.+
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~ 29 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEIL 29 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEE
Confidence 5666677788887787766643
No 389
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=56.34 E-value=41 Score=20.10 Aligned_cols=35 Identities=14% Similarity=0.158 Sum_probs=20.9
Q ss_pred EEECC-CCCEEEEecCCCCeEEEEEECCCCCeEEEe
Q psy6444 44 LRQGD-TGDWIGTFEGHKGCVWGVDINKDASKAASG 78 (88)
Q Consensus 44 ~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 78 (88)
+|.+. .+..+.....+-..-+.++|+|++..+..+
T Consensus 145 lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~a 180 (307)
T COG3386 145 LYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVA 180 (307)
T ss_pred EEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEE
Confidence 44444 344444444444555788999999766543
No 390
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=55.25 E-value=12 Score=13.67 Aligned_cols=24 Identities=13% Similarity=0.097 Sum_probs=15.5
Q ss_pred CEEEEEEEecCCCCcEEEEEeCCCCEEEE
Q psy6444 17 PVVHLAFSDITESGYFLISACKDGKPMLR 45 (88)
Q Consensus 17 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (88)
.+.+++.. ..+++.+...+.+++|
T Consensus 3 ~i~aia~g-----~~~vavaTS~~~lRif 26 (27)
T PF12341_consen 3 EIEAIAAG-----DSWVAVATSAGYLRIF 26 (27)
T ss_pred eEEEEEcc-----CCEEEEEeCCCeEEec
Confidence 35555543 4577777777778776
No 391
>KOG1832|consensus
Probab=55.13 E-value=23 Score=24.96 Aligned_cols=36 Identities=11% Similarity=0.130 Sum_probs=29.5
Q ss_pred EEEecCCCCeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 53 IGTFEGHKGCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 53 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
+..+..+....++++|+.+.++++.++..|.+++++
T Consensus 1094 w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~n 1129 (1516)
T KOG1832|consen 1094 WRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFN 1129 (1516)
T ss_pred chhhhccccceeeEEeecCCceEEeeeccceEEEEE
Confidence 445556677888999999999999999999998764
No 392
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=51.54 E-value=72 Score=21.44 Aligned_cols=70 Identities=14% Similarity=0.107 Sum_probs=44.8
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECC-----C-C---CEEEEe--cCCC-CeEEEEEECCCCCeEEEecCCC
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQGD-----T-G---DWIGTF--EGHK-GCVWGVDINKDASKAASGAADF 82 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~---~~~~~~--~~~~-~~i~~~~~~~~~~~~~~~~~d~ 82 (88)
.+.|.+++|... ++++.+.+.+-.+.|.++... + + ..+..+ ..++ ..|....|-++|..++.++ +
T Consensus 72 ~~~I~dLDWtst-~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--N 148 (631)
T PF12234_consen 72 DDPIRDLDWTST-PDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--N 148 (631)
T ss_pred CCceeeceeeec-CCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--C
Confidence 577899999642 778888888888888887432 1 1 122222 2232 4677888888888776543 3
Q ss_pred eEEEc
Q psy6444 83 QAKAL 87 (88)
Q Consensus 83 ~i~~~ 87 (88)
.+.++
T Consensus 149 qlfv~ 153 (631)
T PF12234_consen 149 QLFVF 153 (631)
T ss_pred EEEEE
Confidence 44443
No 393
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=50.58 E-value=4.5 Score=14.24 Aligned_cols=7 Identities=14% Similarity=0.202 Sum_probs=4.3
Q ss_pred ECCCCCe
Q psy6444 68 INKDASK 74 (88)
Q Consensus 68 ~~~~~~~ 74 (88)
|||+|++
T Consensus 8 FSp~Grl 14 (23)
T PF10584_consen 8 FSPDGRL 14 (23)
T ss_dssp BBTTSSB
T ss_pred ECCCCeE
Confidence 5666653
No 394
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=48.14 E-value=88 Score=21.44 Aligned_cols=59 Identities=19% Similarity=0.241 Sum_probs=37.4
Q ss_pred CCCcEEEEEeCCCCEEEEECCC-------C----C---------EEEEecCCCCeEEEEEEC--CCCCeEEEecCCCeEE
Q psy6444 28 ESGYFLISACKDGKPMLRQGDT-------G----D---------WIGTFEGHKGCVWGVDIN--KDASKAASGAADFQAK 85 (88)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~-------~----~---------~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~d~~i~ 85 (88)
...+.|+.+..||.|.+|.... . . +-..+. -...+|+++++ ...+++|.++....|.
T Consensus 112 g~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VT 190 (717)
T PF08728_consen 112 GGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVT 190 (717)
T ss_pred CCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEE
Confidence 3557889999999999995421 0 0 011111 23477888887 6677777666666676
Q ss_pred Ec
Q psy6444 86 AL 87 (88)
Q Consensus 86 ~~ 87 (88)
||
T Consensus 191 VF 192 (717)
T PF08728_consen 191 VF 192 (717)
T ss_pred EE
Confidence 64
No 395
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=46.84 E-value=91 Score=22.04 Aligned_cols=38 Identities=16% Similarity=-0.005 Sum_probs=24.0
Q ss_pred CEEEEECCCCCEEEEe-cCCCCeEEEEEECCCCCeEEE-ec
Q psy6444 41 KPMLRQGDTGDWIGTF-EGHKGCVWGVDINKDASKAAS-GA 79 (88)
Q Consensus 41 ~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~-~~ 79 (88)
.+.+-|.. +...+.+ ..+...+.+.+|+|||+.++= .+
T Consensus 330 ~L~~~D~d-G~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts 369 (912)
T TIGR02171 330 NLAYIDYT-KGASRAVEIEDTISVYHPDISPDGKKVAFCTG 369 (912)
T ss_pred eEEEEecC-CCCceEEEecCCCceecCcCCCCCCEEEEEEe
Confidence 55555654 3223333 335667788899999998874 44
No 396
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=46.62 E-value=63 Score=19.38 Aligned_cols=79 Identities=16% Similarity=0.151 Sum_probs=42.4
Q ss_pred ceeEEecCCCCCEEEEEEEec----CCCCcEEEEEeCCCCEEEEECCCCCEE---EEec-CCCCeEEEEEECCCCCeEEE
Q psy6444 6 QIPLTCSGHTRPVVHLAFSDI----TESGYFLISACKDGKPMLRQGDTGDWI---GTFE-GHKGCVWGVDINKDASKAAS 77 (88)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~i~~~~~~~~~~~~~~ 77 (88)
.++..+..|.++ ..+.|-.- +..+..++.....+.|....+.....+ ..+. ....++..++..|||.++++
T Consensus 244 ~P~~~~~~~~ap-~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~ 322 (331)
T PF07995_consen 244 PPVFAYPPHSAP-TGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVS 322 (331)
T ss_dssp --SEEETTT--E-EEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEE
T ss_pred ccceeecCcccc-CceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEE
Confidence 355556655443 34444310 124556666665566766665433222 2222 33448899999999999988
Q ss_pred ecCCCeEE
Q psy6444 78 GAADFQAK 85 (88)
Q Consensus 78 ~~~d~~i~ 85 (88)
...++.|.
T Consensus 323 ~d~~G~iy 330 (331)
T PF07995_consen 323 DDSDGKIY 330 (331)
T ss_dssp E-TTTTEE
T ss_pred ECCCCeEe
Confidence 77777663
No 397
>KOG3616|consensus
Probab=46.18 E-value=1e+02 Score=21.71 Aligned_cols=33 Identities=15% Similarity=0.062 Sum_probs=26.3
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCC
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTG 50 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 50 (88)
...+..+.-+ |.|+-++.+..|+++.+|+....
T Consensus 14 ~e~~~aiqsh---p~~~s~v~~~~d~si~lfn~~~r 46 (1636)
T KOG3616|consen 14 DEFTTAIQSH---PGGQSFVLAHQDGSIILFNFIPR 46 (1636)
T ss_pred cceeeeeeec---CCCceEEEEecCCcEEEEeeccc
Confidence 3456777777 68899999999999999987543
No 398
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=43.90 E-value=76 Score=19.48 Aligned_cols=65 Identities=18% Similarity=0.187 Sum_probs=40.9
Q ss_pred EEEEEEecCCCCcEEEEEeC---CCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEe-cCCCeEEEc
Q psy6444 19 VHLAFSDITESGYFLISACK---DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASG-AADFQAKAL 87 (88)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~d~~i~~~ 87 (88)
..++++ ++++.++.+.. ++.+.+.|..+...+.....-... ..+++.|++..+... ..++.+.+.
T Consensus 119 ~~~~~~---~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi 187 (381)
T COG3391 119 VGLAVD---PDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVI 187 (381)
T ss_pred ceEEEC---CCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEE
Confidence 456777 56766555544 567777787777766654332222 788999999966544 355666554
No 399
>KOG3630|consensus
Probab=43.62 E-value=1.3e+02 Score=22.18 Aligned_cols=59 Identities=14% Similarity=-0.002 Sum_probs=38.8
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCC--CEEEEecCC-CCeEEEEEECCCCCeEE
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTG--DWIGTFEGH-KGCVWGVDINKDASKAA 76 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~i~~~~~~~~~~~~~ 76 (88)
+..+.++.|+ +.|..++.+...|.+.-|...-. ..+...... ...|.++.|-....+++
T Consensus 198 t~~~Tav~WS---prGKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl~v~Wl~t~eflv 259 (1405)
T KOG3630|consen 198 TNSQTAVLWS---PRGKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEENYRVLSVTWLSTQEFLV 259 (1405)
T ss_pred ccceeeEEec---cccceeeEecCCCeEEEeecccceeecccCCCcCCCcceeEEEEecceeEEE
Confidence 4567899999 78999999999998887754311 122221111 46788888876655554
No 400
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=42.88 E-value=24 Score=13.53 Aligned_cols=19 Identities=16% Similarity=0.102 Sum_probs=12.8
Q ss_pred CcEEEEEeCCCCEEEEECC
Q psy6444 30 GYFLISACKDGKPMLRQGD 48 (88)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~ 48 (88)
+..++.++.++.+..+|..
T Consensus 21 ~g~vyv~~~dg~l~ald~~ 39 (40)
T PF13570_consen 21 GGRVYVGTGDGNLYALDAA 39 (40)
T ss_dssp TSEEEEE-TTSEEEEEETT
T ss_pred CCEEEEEcCCCEEEEEeCC
Confidence 4567777778888777754
No 401
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=42.60 E-value=85 Score=19.70 Aligned_cols=52 Identities=21% Similarity=0.245 Sum_probs=19.3
Q ss_pred EEEecCCCCcE-EEEEeCCCCEEEE--ECCCCCEEEEecCCCCeEEEEEECCCCCeEE
Q psy6444 22 AFSDITESGYF-LISACKDGKPMLR--QGDTGDWIGTFEGHKGCVWGVDINKDASKAA 76 (88)
Q Consensus 22 ~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 76 (88)
.|. .+|+. ++.+..++.-.+| |+.+++..+.-.+.........++++.+.+.
T Consensus 42 ~ft---~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~ 96 (386)
T PF14583_consen 42 CFT---DDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALY 96 (386)
T ss_dssp -B----TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEE
T ss_pred CcC---CCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEE
Confidence 455 67854 4555556655544 6665554333332211122234456555443
No 402
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=40.78 E-value=67 Score=17.97 Aligned_cols=57 Identities=14% Similarity=0.117 Sum_probs=38.6
Q ss_pred EEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEEC-CCCC-eEEEe
Q psy6444 18 VVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDIN-KDAS-KAASG 78 (88)
Q Consensus 18 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~-~~~~~ 78 (88)
.-.+++. .+|+..++....+.|..++.. ++.+..+......+.+++|- ++.. ++++.
T Consensus 186 pDG~~vD---~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 186 PDGLAVD---SDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFGGPDGKTLYVTT 244 (246)
T ss_dssp EEEEEEB---TTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEESTTSSEEEEEE
T ss_pred CCcceEc---CCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEECCCCCEEEEEe
Confidence 4456777 788887777777889898876 88777776655678888883 4433 44443
No 403
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=40.59 E-value=1e+02 Score=20.05 Aligned_cols=48 Identities=19% Similarity=0.207 Sum_probs=30.7
Q ss_pred CCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeE-EEEEECCCCCeEE
Q psy6444 29 SGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCV-WGVDINKDASKAA 76 (88)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~ 76 (88)
.+..++.+..++.+..+|..+++.+-.+....... .-+.+..++++++
T Consensus 471 ~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g~~~~a~P~ty~~~G~qYv 519 (527)
T TIGR03075 471 AGDLVFYGTLEGYFKAFDAKTGEELWKFKTGSGIVGPPVTYEQDGKQYV 519 (527)
T ss_pred CCcEEEEECCCCeEEEEECCCCCEeEEEeCCCCceecCEEEEeCCEEEE
Confidence 45677778889999999999999877665432211 1123334566554
No 404
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=40.20 E-value=27 Score=13.33 Aligned_cols=25 Identities=20% Similarity=0.259 Sum_probs=17.5
Q ss_pred EEEEeCCCCEEEEECCCCCEEEEec
Q psy6444 33 LISACKDGKPMLRQGDTGDWIGTFE 57 (88)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~ 57 (88)
++.+..++.+.-.|..+|+.+-.++
T Consensus 3 v~~~~~~g~l~AlD~~TG~~~W~~~ 27 (38)
T PF01011_consen 3 VYVGTPDGYLYALDAKTGKVLWKFQ 27 (38)
T ss_dssp EEEETTTSEEEEEETTTTSEEEEEE
T ss_pred EEEeCCCCEEEEEECCCCCEEEeee
Confidence 4455777888878888888665554
No 405
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=39.51 E-value=1.2e+02 Score=20.73 Aligned_cols=30 Identities=13% Similarity=0.010 Sum_probs=26.1
Q ss_pred CCEEEEEEEecCCCCcEEEEEeCCCCEEEEEC
Q psy6444 16 RPVVHLAFSDITESGYFLISACKDGKPMLRQG 47 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 47 (88)
.+..+++|+| .+...++.....|.-.+|++
T Consensus 146 ~~~aDv~FnP--~~~~q~AiVD~~G~Wsvw~i 175 (765)
T PF10214_consen 146 FPHADVAFNP--WDQRQFAIVDEKGNWSVWDI 175 (765)
T ss_pred CccceEEecc--CccceEEEEeccCcEEEEEe
Confidence 3567889997 77789999999999999999
No 406
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=38.71 E-value=96 Score=19.21 Aligned_cols=30 Identities=20% Similarity=0.232 Sum_probs=23.8
Q ss_pred CEEEEEEEecCCCCcEEEEEeCCCCEEEEECCC
Q psy6444 17 PVVHLAFSDITESGYFLISACKDGKPMLRQGDT 49 (88)
Q Consensus 17 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 (88)
.+..+... +..+.+++...++.+.+|++..
T Consensus 191 ~I~~v~~d---~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 191 KIVQVAVD---PSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp -EEEEEEE---TTTTEEEEEESSE-EEEEEE-S
T ss_pred ceeeEEec---CCcCEEEEEeCCCcEEEEEEeC
Confidence 38888888 5678999999999999999974
No 407
>KOG2114|consensus
Probab=38.24 E-value=1.4e+02 Score=21.07 Aligned_cols=61 Identities=13% Similarity=0.120 Sum_probs=38.7
Q ss_pred CCCEEEEEEEecCCCCcE-EEEEeCCCCEEEEECCCCC-EEEEecCCCCeEEEEEECCCCCeEEEec
Q psy6444 15 TRPVVHLAFSDITESGYF-LISACKDGKPMLRQGDTGD-WIGTFEGHKGCVWGVDINKDASKAASGA 79 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 79 (88)
.++|+.+.+. .++.. ++.+. ...|..|.+.... .......+.....+..+++....+++++
T Consensus 171 ~~pITgL~~~---~d~~s~lFv~T-t~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~ 233 (933)
T KOG2114|consen 171 KEPITGLALR---SDGKSVLFVAT-TEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG 233 (933)
T ss_pred CCCceeeEEe---cCCceeEEEEe-cceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec
Confidence 4678888887 56655 33333 3568888876333 2344666667778888887666566554
No 408
>KOG4441|consensus
Probab=37.53 E-value=1.2e+02 Score=20.01 Aligned_cols=55 Identities=16% Similarity=0.013 Sum_probs=28.4
Q ss_pred CCcEEEEEeCC-C-----CEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCCe
Q psy6444 29 SGYFLISACKD-G-----KPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADFQ 83 (88)
Q Consensus 29 ~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 83 (88)
++..++.|+.+ + .+..||.....+...-.-...+...-.-.-+|..++.++.|+.
T Consensus 332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~l~g~iYavGG~dg~ 392 (571)
T KOG4441|consen 332 NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAVLDGKLYAVGGFDGE 392 (571)
T ss_pred CCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEEECCEEEEEeccccc
Confidence 56677788887 2 4556776665543311111122211111335667777777753
No 409
>KOG2280|consensus
Probab=37.34 E-value=1.4e+02 Score=20.77 Aligned_cols=57 Identities=18% Similarity=0.225 Sum_probs=33.5
Q ss_pred CCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEE----ecCCCCeEEEEEECCCCCeEEE
Q psy6444 16 RPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGT----FEGHKGCVWGVDINKDASKAAS 77 (88)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~ 77 (88)
+.+....|+ +.+.++...++|.+.+|+.. +..+.. +......|....+.+.|..+.+
T Consensus 84 ~~lI~mgWs----~~eeLI~v~k~g~v~Vy~~~-ge~ie~~svg~e~~~~~I~ec~~f~~GVavlt 144 (829)
T KOG2280|consen 84 GELIGMGWS----DDEELICVQKDGTVHVYGLL-GEFIESNSVGFESQMSDIVECRFFHNGVAVLT 144 (829)
T ss_pred CCeeeeccc----CCceEEEEeccceEEEeecc-hhhhcccccccccccCceeEEEEecCceEEEe
Confidence 366677887 45667778889999999875 332222 1222334555555555554444
No 410
>KOG2247|consensus
Probab=37.19 E-value=56 Score=21.40 Aligned_cols=54 Identities=15% Similarity=0.094 Sum_probs=38.3
Q ss_pred EEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEE
Q psy6444 21 LAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAAS 77 (88)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 77 (88)
..|+ .....++.+...+.+.++.....+.+-..-.|.+++...++.+.+..+..
T Consensus 123 l~ws---Kg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil~ 176 (615)
T KOG2247|consen 123 LAWS---KGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVILC 176 (615)
T ss_pred Hhhc---cCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceeeec
Confidence 5566 45566666677788888887766655555558888888999887776543
No 411
>PHA02713 hypothetical protein; Provisional
Probab=35.39 E-value=1.3e+02 Score=19.72 Aligned_cols=52 Identities=10% Similarity=-0.029 Sum_probs=23.9
Q ss_pred CCcEEEEEeCC------CCEEEEECCC-CCEE--EEecCCCCeEEEEEECCCCCeEEEecCCC
Q psy6444 29 SGYFLISACKD------GKPMLRQGDT-GDWI--GTFEGHKGCVWGVDINKDASKAASGAADF 82 (88)
Q Consensus 29 ~~~~~~~~~~~------~~~~~~~~~~-~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~d~ 82 (88)
++...+.|+.+ ..+..||..+ ..+. ..+...... .+++ ..++..++.++.++
T Consensus 463 ~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~-~~~~-~~~~~iyv~Gg~~~ 523 (557)
T PHA02713 463 KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSA-LHTI-LHDNTIMMLHCYES 523 (557)
T ss_pred CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCccccc-ceeE-EECCEEEEEeeecc
Confidence 45555555543 1355677765 4432 222221111 1111 22566666777665
No 412
>PRK14751 tetracycline resistance determinant leader peptide; Provisional
Probab=32.78 E-value=30 Score=12.42 Aligned_cols=9 Identities=11% Similarity=-0.042 Sum_probs=4.8
Q ss_pred CCCeEEEcC
Q psy6444 80 ADFQAKALK 88 (88)
Q Consensus 80 ~d~~i~~~~ 88 (88)
.|.+|.-||
T Consensus 13 sdksi~hwd 21 (28)
T PRK14751 13 SDKSIYHWD 21 (28)
T ss_pred CcCceeeee
Confidence 445555554
No 413
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=32.12 E-value=1.2e+02 Score=18.31 Aligned_cols=70 Identities=16% Similarity=0.156 Sum_probs=37.0
Q ss_pred ceeEEecCCCCCEE-EEEEEecCCCCc-EEEEEeCC--CCEEEEECCC--CCEEEEecCCCCeEEEEEECCCCCeEEEe
Q psy6444 6 QIPLTCSGHTRPVV-HLAFSDITESGY-FLISACKD--GKPMLRQGDT--GDWIGTFEGHKGCVWGVDINKDASKAASG 78 (88)
Q Consensus 6 ~~~~~~~~~~~~v~-~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 78 (88)
...+.+....-.|. .+.++ ++++ .++.+..+ ..-.+|.+.- +..+..+....+....+.|+|++.+++-.
T Consensus 270 ~~~~~lT~G~~~V~~i~~~d---~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~ 345 (353)
T PF00930_consen 270 GKPRQLTSGDWEVTSILGWD---EDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDT 345 (353)
T ss_dssp SEEEESS-SSS-EEEEEEEE---CTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEEEE
T ss_pred cceeccccCceeecccceEc---CCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEEEE
Confidence 33445555555564 46667 5554 44455543 3455664432 34445554433333688999999988743
No 414
>KOG3616|consensus
Probab=31.77 E-value=92 Score=21.93 Aligned_cols=25 Identities=4% Similarity=-0.073 Sum_probs=14.9
Q ss_pred EEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 64 WGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 64 ~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
.++.-+|.+.-++.+..|+++++++
T Consensus 18 ~aiqshp~~~s~v~~~~d~si~lfn 42 (1636)
T KOG3616|consen 18 TAIQSHPGGQSFVLAHQDGSIILFN 42 (1636)
T ss_pred eeeeecCCCceEEEEecCCcEEEEe
Confidence 4444456666666666666666553
No 415
>KOG3179|consensus
Probab=31.40 E-value=42 Score=19.15 Aligned_cols=44 Identities=20% Similarity=0.241 Sum_probs=22.1
Q ss_pred EEecCCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCCEEEEecCCC
Q psy6444 9 LTCSGHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGDWIGTFEGHK 60 (88)
Q Consensus 9 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 60 (88)
...+.|...|..+ |.+-.+...+.+..+.+|.. .....++++|.
T Consensus 149 ~IikcHqDevle~------PE~a~llasSe~ceve~fs~--~~~~l~fQGHP 192 (245)
T KOG3179|consen 149 NIIKCHQDEVLEL------PEGAELLASSEKCEVEMFSI--EDHLLCFQGHP 192 (245)
T ss_pred hHHhhcccceecC------CchhhhhccccccceEEEEe--cceEEEecCCc
Confidence 3344555554443 45544444455555666655 33445556553
No 416
>PF14782 BBS2_C: Ciliary BBSome complex subunit 2, C-terminal
Probab=31.01 E-value=1.5e+02 Score=19.01 Aligned_cols=26 Identities=15% Similarity=0.097 Sum_probs=17.2
Q ss_pred eEEEEEECCCC-CeEEEecCCCeEEEc
Q psy6444 62 CVWGVDINKDA-SKAASGAADFQAKAL 87 (88)
Q Consensus 62 ~i~~~~~~~~~-~~~~~~~~d~~i~~~ 87 (88)
.+..-++..+| ..+++++.||.++.|
T Consensus 16 ~vv~~DYR~dG~~~lI~csvdGeVrGy 42 (431)
T PF14782_consen 16 GVVVADYRMDGKPQLICCSVDGEVRGY 42 (431)
T ss_pred eeeeeccccCCCceEEEEEcCCEEEEe
Confidence 34444555565 466788888888876
No 417
>KOG2377|consensus
Probab=30.16 E-value=1.7e+02 Score=19.35 Aligned_cols=56 Identities=7% Similarity=0.029 Sum_probs=37.8
Q ss_pred CCCCCEEEEEEEecCCCCcEEEEEeCCCCEEEEECCCCC----EEEEecCCCCeEEEEEECCC
Q psy6444 13 GHTRPVVHLAFSDITESGYFLISACKDGKPMLRQGDTGD----WIGTFEGHKGCVWGVDINKD 71 (88)
Q Consensus 13 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~~~ 71 (88)
...+++..+.|+ ++.+.++.-..+..+.++...... ....++.....|.+..|+..
T Consensus 64 ~d~G~I~SIkFS---lDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s 123 (657)
T KOG2377|consen 64 DDKGEIKSIKFS---LDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS 123 (657)
T ss_pred cCCCceeEEEec---cCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC
Confidence 356789999999 799999999999999988763211 11223333344666666554
No 418
>KOG4460|consensus
Probab=29.92 E-value=1.8e+02 Score=19.61 Aligned_cols=68 Identities=12% Similarity=0.062 Sum_probs=37.7
Q ss_pred EEEEEEEecCCCCcEEEEEeCCCCEEEEE---------CCCCCEE---EE-------ecCC-CCeEEEEEECCCC---Ce
Q psy6444 18 VVHLAFSDITESGYFLISACKDGKPMLRQ---------GDTGDWI---GT-------FEGH-KGCVWGVDINKDA---SK 74 (88)
Q Consensus 18 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~---~~-------~~~~-~~~i~~~~~~~~~---~~ 74 (88)
|..+..+ +.|..++-.+.+|.+.++- +..++.. +. +... .-.+.-.+|+|+. ..
T Consensus 106 V~~vl~s---~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~h 182 (741)
T KOG4460|consen 106 VYQVLLS---PTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPH 182 (741)
T ss_pred EEEEEec---CCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCce
Confidence 4456666 6888888777777655542 1122211 11 1111 1123456888875 24
Q ss_pred EEEecCCCeEEEcC
Q psy6444 75 AASGAADFQAKALK 88 (88)
Q Consensus 75 ~~~~~~d~~i~~~~ 88 (88)
+.--..|..+|+||
T Consensus 183 L~iL~sdnviRiy~ 196 (741)
T KOG4460|consen 183 LVLLTSDNVIRIYS 196 (741)
T ss_pred EEEEecCcEEEEEe
Confidence 44556788899875
No 419
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=28.38 E-value=79 Score=15.06 Aligned_cols=27 Identities=11% Similarity=0.123 Sum_probs=18.5
Q ss_pred CeEEEEEECCCCCeEE-EecCCCeEEEc
Q psy6444 61 GCVWGVDINKDASKAA-SGAADFQAKAL 87 (88)
Q Consensus 61 ~~i~~~~~~~~~~~~~-~~~~d~~i~~~ 87 (88)
.....+.++|++..+. +....+.|.++
T Consensus 54 ~~aNGI~~s~~~k~lyVa~~~~~~I~vy 81 (86)
T PF01731_consen 54 SFANGIAISPDKKYLYVASSLAHSIHVY 81 (86)
T ss_pred CCCceEEEcCCCCEEEEEeccCCeEEEE
Confidence 3446778899888765 44566777765
No 420
>KOG1983|consensus
Probab=27.61 E-value=1.2e+02 Score=21.77 Aligned_cols=24 Identities=21% Similarity=0.336 Sum_probs=20.9
Q ss_pred CCCcEEEEEeCCCCEEEEECCCCC
Q psy6444 28 ESGYFLISACKDGKPMLRQGDTGD 51 (88)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~ 51 (88)
..+..++++..|+.+.+||+..+.
T Consensus 244 ~~~~~~v~~h~Dgs~~fWd~s~g~ 267 (993)
T KOG1983|consen 244 RDGSHFVSYHTDGSYAFWDVSSGK 267 (993)
T ss_pred cCCceEEEEEecCCEEeeecCCCc
Confidence 568899999999999999998764
No 421
>PF09081 DUF1921: Domain of unknown function (DUF1921); InterPro: IPR015165 This domain, which is found in a set of prokaryotic amylases, has no known function []. ; PDB: 1QI5_A 1JDC_A 2AMG_A 1QPK_A 1JDD_A 1QI4_A 1JDA_A 1GCY_A 1QI3_A.
Probab=27.50 E-value=40 Score=14.19 Aligned_cols=8 Identities=13% Similarity=0.032 Sum_probs=5.9
Q ss_pred CCCeEEEc
Q psy6444 80 ADFQAKAL 87 (88)
Q Consensus 80 ~d~~i~~~ 87 (88)
.++.+|+|
T Consensus 43 dnG~vRiW 50 (51)
T PF09081_consen 43 DNGQVRIW 50 (51)
T ss_dssp TTTTEEEE
T ss_pred cCCcEEee
Confidence 45778888
No 422
>KOG1897|consensus
Probab=26.85 E-value=2.5e+02 Score=20.43 Aligned_cols=53 Identities=13% Similarity=-0.002 Sum_probs=33.3
Q ss_pred CCCcEEEEEeCCCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEEecCCC
Q psy6444 28 ESGYFLISACKDGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAASGAADF 82 (88)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~ 82 (88)
.+|..+++-+ ..+++|+..+.+.++.-..+...+..+.+.-.+..++.+---+
T Consensus 838 fngkllA~In--~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~ 890 (1096)
T KOG1897|consen 838 FNGKLLAGIN--QSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMR 890 (1096)
T ss_pred hCCeEEEecC--cEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccc
Confidence 4677776654 5688888876666655555556666666666666666554333
No 423
>PRK10115 protease 2; Provisional
Probab=25.46 E-value=2.3e+02 Score=19.35 Aligned_cols=53 Identities=13% Similarity=0.093 Sum_probs=29.8
Q ss_pred EEEEEEEecCCCCcEEEEEeC-CC----CEEEEECCCCCEEE-EecCCCCeEEEEEECCCCCeEE
Q psy6444 18 VVHLAFSDITESGYFLISACK-DG----KPMLRQGDTGDWIG-TFEGHKGCVWGVDINKDASKAA 76 (88)
Q Consensus 18 v~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~ 76 (88)
+..+.++ +++++++.+.. +| .+.+.++.++..+. .+... . ..+.|.+++..++
T Consensus 129 l~~~~~S---pdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~-~--~~~~w~~D~~~~~ 187 (686)
T PRK10115 129 LGGMAIT---PDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNV-E--PSFVWANDSWTFY 187 (686)
T ss_pred EeEEEEC---CCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCc-c--eEEEEeeCCCEEE
Confidence 4456677 78887665433 23 35566776554221 12211 1 4578988887655
No 424
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=24.74 E-value=97 Score=14.87 Aligned_cols=38 Identities=16% Similarity=0.046 Sum_probs=21.2
Q ss_pred CCCEEEEECCCCCEEEEecCCCCeEEEEEECCCCCeEEE
Q psy6444 39 DGKPMLRQGDTGDWIGTFEGHKGCVWGVDINKDASKAAS 77 (88)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 77 (88)
+|.+.-||..+++. ..+...-.-.+.+++++++..++.
T Consensus 36 ~GRll~ydp~t~~~-~vl~~~L~fpNGVals~d~~~vlv 73 (89)
T PF03088_consen 36 TGRLLRYDPSTKET-TVLLDGLYFPNGVALSPDESFVLV 73 (89)
T ss_dssp -EEEEEEETTTTEE-EEEEEEESSEEEEEE-TTSSEEEE
T ss_pred CcCEEEEECCCCeE-EEehhCCCccCeEEEcCCCCEEEE
Confidence 45677777765543 222222234577899999996653
No 425
>KOG2467|consensus
Probab=24.49 E-value=89 Score=19.79 Aligned_cols=22 Identities=23% Similarity=0.329 Sum_probs=18.8
Q ss_pred CCCcEEEEEeCCCCEEEEECCC
Q psy6444 28 ESGYFLISACKDGKPMLRQGDT 49 (88)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~ 49 (88)
.-|..+++++.|..+.+||+..
T Consensus 339 ~~Gy~lvtgGTDnHlvLvDLr~ 360 (477)
T KOG2467|consen 339 SRGYKLVTGGTDNHLVLVDLRP 360 (477)
T ss_pred HcCceEecCCccceEEEEeccc
Confidence 3577899999999999999874
No 426
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=23.93 E-value=2.5e+02 Score=19.34 Aligned_cols=30 Identities=20% Similarity=0.282 Sum_probs=26.8
Q ss_pred CCCEEEEEEEecCCCCcEEEEEeCCCCEEEEEC
Q psy6444 15 TRPVVHLAFSDITESGYFLISACKDGKPMLRQG 47 (88)
Q Consensus 15 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 47 (88)
...+..+.+. .++..++....+|.+.+|+.
T Consensus 129 ~~kvv~Ik~~---~~~~~I~vvl~nG~i~~~d~ 158 (670)
T PF10395_consen 129 DDKVVGIKFS---SDGKIIYVVLENGSIQIYDF 158 (670)
T ss_pred ccceEEEEEe---cCCCEEEEEEcCCcEEEEec
Confidence 4678888998 78999999999999999998
No 427
>KOG1983|consensus
Probab=23.68 E-value=2.2e+02 Score=20.52 Aligned_cols=20 Identities=20% Similarity=0.036 Sum_probs=17.7
Q ss_pred CCCCCeEEEecCCCeEEEcC
Q psy6444 69 NKDASKAASGAADFQAKALK 88 (88)
Q Consensus 69 ~~~~~~~~~~~~d~~i~~~~ 88 (88)
+.++..+++.-.|+.+..||
T Consensus 243 ~~~~~~~v~~h~Dgs~~fWd 262 (993)
T KOG1983|consen 243 SRDGSHFVSYHTDGSYAFWD 262 (993)
T ss_pred ccCCceEEEEEecCCEEeee
Confidence 66788999999999999997
No 428
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=22.42 E-value=1.8e+02 Score=17.17 Aligned_cols=28 Identities=21% Similarity=0.137 Sum_probs=21.1
Q ss_pred CeEEEEEECCCCCeEEEecCCCeEEEcC
Q psy6444 61 GCVWGVDINKDASKAASGAADFQAKALK 88 (88)
Q Consensus 61 ~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 88 (88)
+....--|+.+|.+++++.-.+.+|..|
T Consensus 259 ~~~~g~i~~~~G~LvAs~~Qegl~r~~~ 286 (286)
T PRK10526 259 GFVRGEFYTQDGVLVASTVQEGVMRNHN 286 (286)
T ss_pred eEEEEEEECCCCCEEEEEEeeEEEEecC
Confidence 3345557889999999998888887643
No 429
>PHA03092 semaphorin-like protein; Provisional
Probab=21.95 E-value=1.1e+02 Score=15.54 Aligned_cols=22 Identities=23% Similarity=0.294 Sum_probs=18.4
Q ss_pred CCCcEEEEEeCCCCEEEEECCC
Q psy6444 28 ESGYFLISACKDGKPMLRQGDT 49 (88)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~ 49 (88)
.+.+.+++|..+|..+.|.++-
T Consensus 70 ed~dtlvcgtnngnpkcwkidg 91 (134)
T PHA03092 70 EDKDTLVCGTNNGNPKCWKIDG 91 (134)
T ss_pred ccCceEEEecCCCCcceEEEcC
Confidence 4678899999999999998763
No 430
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=20.37 E-value=2.5e+02 Score=18.03 Aligned_cols=30 Identities=20% Similarity=0.268 Sum_probs=23.3
Q ss_pred CCcEEEEEeCCCCEEEEECCCCCEEEEecC
Q psy6444 29 SGYFLISACKDGKPMLRQGDTGDWIGTFEG 58 (88)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 58 (88)
.++.++.++.++.+.-+|..+++.+-....
T Consensus 405 ~g~~v~~g~~dG~l~ald~~tG~~lW~~~~ 434 (488)
T cd00216 405 AGNLVFAGAADGYFRAFDATTGKELWKFRT 434 (488)
T ss_pred cCCeEEEECCCCeEEEEECCCCceeeEEEC
Confidence 356777788899999999999987766553
Done!