Query psy6445
Match_columns 134
No_of_seqs 121 out of 2012
Neff 11.8
Searched_HMMs 29240
Date Fri Aug 16 18:05:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6445.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6445hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 1.8E-36 6.2E-41 176.2 15.8 129 1-129 34-164 (169)
2 4gpm_A Engineered protein OR26 100.0 1.8E-34 6.2E-39 167.8 16.1 129 6-134 6-136 (169)
3 4b93_B Ankyrin repeat domain-c 100.0 1.6E-34 5.4E-39 179.0 15.1 134 1-134 83-218 (269)
4 2rfm_A Putative ankyrin repeat 100.0 6.2E-34 2.1E-38 168.5 15.7 134 1-134 32-167 (192)
5 1bi7_B P16INK4A, MTS1, multipl 100.0 1.4E-34 4.7E-39 166.4 12.2 133 1-134 9-144 (156)
6 1d9s_A Cyclin-dependent kinase 100.0 4E-34 1.4E-38 161.1 13.5 125 1-126 9-136 (136)
7 3v31_A Ankyrin repeat family A 100.0 3.5E-33 1.2E-37 162.0 15.9 132 3-134 2-135 (167)
8 1awc_B Protein (GA binding pro 100.0 6.2E-33 2.1E-37 159.0 15.1 131 4-134 2-133 (153)
9 1n0r_A 4ANK, 4 ankyrin repeats 100.0 1.3E-32 4.6E-37 152.7 15.9 124 3-126 1-126 (126)
10 3twr_A Tankyrase-2; ankyrin re 100.0 4.1E-33 1.4E-37 161.5 14.2 134 1-134 5-141 (165)
11 3v30_A DNA-binding protein rfx 100.0 4E-33 1.4E-37 162.5 13.6 129 2-130 34-164 (172)
12 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.4E-32 4.6E-37 159.9 15.4 133 2-134 12-146 (169)
13 3f6q_A Integrin-linked protein 100.0 3.2E-32 1.1E-36 159.7 15.9 133 2-134 3-138 (179)
14 3aji_A 26S proteasome non-ATPa 100.0 4.7E-32 1.6E-36 164.3 17.0 133 2-134 71-205 (231)
15 3f6q_A Integrin-linked protein 100.0 2E-32 6.9E-37 160.5 14.7 133 1-133 36-170 (179)
16 2jab_A H10-2-G3; HER2, darpin, 100.0 2.3E-32 7.8E-37 153.9 13.9 123 2-124 12-136 (136)
17 1yyh_A HN1;, notch 1, ankyrin 100.0 4.3E-32 1.5E-36 166.7 15.8 133 2-134 88-223 (253)
18 3v30_A DNA-binding protein rfx 100.0 6E-32 2E-36 157.5 15.4 131 4-134 2-135 (172)
19 3aji_A 26S proteasome non-ATPa 100.0 1.2E-31 4.1E-36 162.6 16.9 134 1-134 37-172 (231)
20 1yyh_A HN1;, notch 1, ankyrin 100.0 7.2E-32 2.5E-36 165.7 15.4 134 1-134 54-190 (253)
21 2f8y_A Notch homolog 1, transl 100.0 2E-31 6.9E-36 160.8 17.0 133 2-134 56-191 (223)
22 2f8y_A Notch homolog 1, transl 100.0 2E-31 6.7E-36 160.9 16.9 134 1-134 22-158 (223)
23 1ihb_A P18-INK4C(INK6), cyclin 100.0 5.1E-32 1.7E-36 156.4 13.6 129 4-133 5-136 (162)
24 2dzn_A Probable 26S proteasome 100.0 1.9E-31 6.4E-36 161.4 16.6 134 1-134 69-208 (228)
25 2xai_A ASB-9, ankyrin repeat a 100.0 1.6E-31 5.6E-36 164.8 16.3 133 1-134 66-199 (261)
26 3hra_A Ankyrin repeat family p 100.0 2.1E-31 7.2E-36 158.5 16.3 134 1-134 36-178 (201)
27 1ikn_D Protein (I-kappa-B-alph 100.0 5.6E-32 1.9E-36 164.6 14.0 133 2-134 43-184 (236)
28 1oy3_D Transcription factor in 100.0 7.5E-32 2.6E-36 167.4 14.8 134 1-134 75-258 (282)
29 1s70_B 130 kDa myosin-binding 100.0 2.2E-31 7.5E-36 166.7 16.9 134 1-134 70-265 (299)
30 2rfa_A Transient receptor pote 100.0 1.6E-31 5.5E-36 162.1 15.7 132 3-134 2-154 (232)
31 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.8E-31 9.5E-36 154.4 15.8 124 1-124 44-169 (169)
32 1oy3_D Transcription factor in 100.0 1.3E-31 4.3E-36 166.4 15.2 90 1-90 6-99 (282)
33 2vge_A RELA-associated inhibit 100.0 1.8E-32 6.1E-37 166.4 11.1 132 2-133 19-155 (229)
34 3twr_A Tankyrase-2; ankyrin re 100.0 1.7E-31 5.9E-36 154.6 14.6 124 1-125 39-164 (165)
35 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.6E-31 5.5E-36 154.3 13.8 125 1-126 35-162 (162)
36 3v31_A Ankyrin repeat family A 100.0 1.6E-31 5.6E-36 155.0 13.7 128 1-128 33-162 (167)
37 2rfa_A Transient receptor pote 100.0 5.3E-31 1.8E-35 159.9 16.5 134 1-134 34-197 (232)
38 3b7b_A Euchromatic histone-lys 100.0 5.2E-31 1.8E-35 160.3 16.5 134 1-134 74-210 (237)
39 1k1a_A B-cell lymphoma 3-encod 100.0 6.3E-31 2.1E-35 160.1 16.8 133 2-134 77-216 (241)
40 2xai_A ASB-9, ankyrin repeat a 100.0 5.3E-31 1.8E-35 162.5 16.6 131 3-134 2-134 (261)
41 1awc_B Protein (GA binding pro 100.0 5.5E-31 1.9E-35 150.9 15.3 120 1-120 31-152 (153)
42 3d9h_A CDNA FLJ77766, highly s 100.0 7.7E-31 2.6E-35 163.7 17.0 133 1-134 56-190 (285)
43 4hbd_A KN motif and ankyrin re 100.0 2.6E-31 9E-36 165.2 14.7 134 1-134 108-250 (276)
44 2rfm_A Putative ankyrin repeat 100.0 4.9E-31 1.7E-35 156.1 15.1 124 1-124 65-190 (192)
45 3b7b_A Euchromatic histone-lys 100.0 1E-30 3.5E-35 159.0 16.6 133 1-133 8-143 (237)
46 3d9h_A CDNA FLJ77766, highly s 100.0 9.9E-31 3.4E-35 163.2 16.7 133 1-134 122-255 (285)
47 1bd8_A P19INK4D CDK4/6 inhibit 100.0 5.5E-31 1.9E-35 151.2 14.1 129 4-134 2-133 (156)
48 2dzn_A Probable 26S proteasome 100.0 1.5E-30 5E-35 157.4 16.7 134 1-134 33-174 (228)
49 1k1a_A B-cell lymphoma 3-encod 100.0 1.9E-30 6.3E-35 158.1 16.9 131 3-133 45-182 (241)
50 3c5r_A BARD-1, BRCA1-associate 100.0 8.8E-32 3E-36 151.6 10.0 126 1-126 7-134 (137)
51 1ikn_D Protein (I-kappa-B-alph 100.0 1.1E-30 3.7E-35 159.0 15.1 128 1-128 75-211 (236)
52 2etb_A Transient receptor pote 100.0 1.9E-31 6.6E-36 163.9 11.5 134 1-134 40-221 (256)
53 1n11_A Ankyrin; clathrin, BAND 100.0 1.7E-30 5.9E-35 170.0 16.0 134 1-134 242-377 (437)
54 2pnn_A Transient receptor pote 100.0 6.5E-31 2.2E-35 163.0 13.2 131 1-131 98-264 (273)
55 3ehr_A Osteoclast-stimulating 100.0 1.2E-31 4E-36 162.0 9.1 133 2-134 71-206 (222)
56 1sw6_A Regulatory protein SWI6 100.0 3.4E-31 1.2E-35 168.1 11.4 134 1-134 128-316 (327)
57 1bd8_A P19INK4D CDK4/6 inhibit 100.0 3.9E-30 1.3E-34 147.6 14.1 122 1-123 33-155 (156)
58 3hra_A Ankyrin repeat family p 100.0 1.3E-29 4.6E-34 150.7 16.3 134 1-134 2-140 (201)
59 3ljn_A Hypothetical protein; a 100.0 4.1E-30 1.4E-34 165.0 15.1 103 32-134 134-244 (364)
60 3utm_A Tankyrase-1; tankyrase, 100.0 1.2E-29 4E-34 161.6 17.1 74 61-134 239-313 (351)
61 3jxi_A Vanilloid receptor-rela 100.0 7.9E-31 2.7E-35 161.5 11.1 134 1-134 43-225 (260)
62 1ycs_B 53BP2, P53BP2; ankyrin 100.0 6.5E-31 2.2E-35 160.4 10.5 128 4-131 37-169 (239)
63 1n11_A Ankyrin; clathrin, BAND 100.0 7.5E-30 2.6E-34 167.0 16.2 133 1-133 11-145 (437)
64 1wdy_A 2-5A-dependent ribonucl 100.0 1.5E-29 5.2E-34 157.0 16.6 132 1-132 145-284 (285)
65 2etb_A Transient receptor pote 100.0 2.2E-30 7.6E-35 159.2 12.6 126 2-127 88-247 (256)
66 3jxi_A Vanilloid receptor-rela 100.0 1.7E-30 5.7E-35 160.0 11.9 126 2-127 91-251 (260)
67 2pnn_A Transient receptor pote 100.0 2.3E-30 7.7E-35 160.5 12.0 129 1-129 51-221 (273)
68 1ycs_B 53BP2, P53BP2; ankyrin 100.0 9.5E-31 3.2E-35 159.7 10.1 133 2-134 3-136 (239)
69 1s70_B 130 kDa myosin-binding 100.0 9.8E-30 3.4E-34 159.2 14.7 132 3-134 39-232 (299)
70 1wdy_A 2-5A-dependent ribonucl 100.0 3.6E-29 1.2E-33 155.3 17.0 132 2-133 37-181 (285)
71 3kea_A K1L; tropism, ANK repea 100.0 6.5E-31 2.2E-35 164.0 9.2 125 1-127 28-155 (285)
72 3kea_A K1L; tropism, ANK repea 100.0 8.4E-30 2.9E-34 159.0 13.5 133 2-134 60-194 (285)
73 3ljn_A Hypothetical protein; a 100.0 3.7E-30 1.3E-34 165.1 12.1 128 2-129 136-272 (364)
74 3aaa_C Myotrophin, protein V-1 100.0 6.4E-30 2.2E-34 141.6 10.6 112 1-112 4-117 (123)
75 4b93_B Ankyrin repeat domain-c 100.0 6.6E-30 2.3E-34 158.3 11.8 134 1-134 49-185 (269)
76 3eu9_A Huntingtin-interacting 100.0 8.7E-29 3E-33 150.4 15.7 134 1-134 6-142 (240)
77 3t8k_A Uncharacterized protein 100.0 1.4E-30 4.9E-35 153.5 7.3 128 3-130 37-183 (186)
78 2fo1_E LIN-12 protein; beta-ba 100.0 5.1E-29 1.8E-33 160.5 14.5 132 3-134 198-346 (373)
79 3utm_A Tankyrase-1; tankyrase, 100.0 3.7E-29 1.3E-33 159.3 13.1 133 2-134 22-157 (351)
80 3eu9_A Huntingtin-interacting 100.0 1.7E-28 5.8E-33 149.1 15.1 131 4-134 76-210 (240)
81 2fo1_E LIN-12 protein; beta-ba 100.0 1.1E-28 3.9E-33 158.9 13.9 134 1-134 163-313 (373)
82 4hbd_A KN motif and ankyrin re 100.0 1.1E-28 3.7E-33 153.4 13.0 124 1-124 142-273 (276)
83 4g8k_A 2-5A-dependent ribonucl 100.0 3.8E-28 1.3E-32 154.5 15.5 131 1-131 165-303 (337)
84 3t8k_A Uncharacterized protein 100.0 4.5E-29 1.5E-33 147.1 10.4 131 4-134 6-154 (186)
85 3deo_A Signal recognition part 100.0 8.6E-29 2.9E-33 145.6 10.3 110 2-111 42-153 (183)
86 3ui2_A Signal recognition part 100.0 6.8E-29 2.3E-33 151.9 8.5 123 3-126 44-185 (244)
87 3lvq_E ARF-GAP with SH3 domain 100.0 1.6E-27 5.6E-32 158.4 14.8 127 5-131 133-270 (497)
88 1dcq_A PYK2-associated protein 100.0 9.3E-27 3.2E-31 144.8 14.4 124 5-128 131-265 (278)
89 2b0o_E UPLC1; arfgap, structur 99.9 4.4E-27 1.5E-31 147.7 12.3 124 4-127 151-285 (301)
90 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.4E-26 4.8E-31 122.3 11.9 90 36-125 2-92 (93)
91 3jue_A Arfgap with coiled-coil 99.9 7.6E-27 2.6E-31 149.9 12.9 123 4-126 199-326 (368)
92 3c5r_A BARD-1, BRCA1-associate 99.9 1.7E-26 5.7E-31 130.0 12.3 104 31-134 5-109 (137)
93 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3E-26 1E-30 121.0 11.5 90 3-92 1-91 (93)
94 4g8k_A 2-5A-dependent ribonucl 99.9 8.5E-26 2.9E-30 143.6 15.2 129 3-131 24-155 (337)
95 2l6b_A NR1C; ankyrin, consensu 99.9 1.5E-26 5.1E-31 126.6 9.3 103 32-134 5-108 (115)
96 3aaa_C Myotrophin, protein V-1 99.9 1E-25 3.4E-30 124.7 11.5 102 33-134 4-106 (123)
97 2l6b_A NR1C; ankyrin, consensu 99.9 2.2E-26 7.4E-31 126.0 8.7 105 1-105 6-112 (115)
98 1d9s_A Cyclin-dependent kinase 99.9 5E-26 1.7E-30 127.9 10.4 106 28-134 4-111 (136)
99 2jab_A H10-2-G3; HER2, darpin, 99.9 7.3E-25 2.5E-29 123.2 10.9 102 33-134 11-113 (136)
100 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.6E-24 8.7E-29 119.1 12.6 100 35-134 1-101 (126)
101 2b0o_E UPLC1; arfgap, structur 99.9 3.7E-25 1.3E-29 139.0 9.9 109 1-114 187-299 (301)
102 2vge_A RELA-associated inhibit 99.9 9.3E-25 3.2E-29 132.5 11.1 112 20-131 1-117 (229)
103 3ehr_A Osteoclast-stimulating 99.9 2.9E-24 1E-28 129.5 11.3 103 32-134 69-173 (222)
104 1bi7_B P16INK4A, MTS1, multipl 99.9 2.1E-24 7.1E-29 123.9 9.6 103 31-134 7-111 (156)
105 2aja_A Ankyrin repeat family p 99.9 1.2E-26 4.2E-31 149.3 0.1 121 3-124 91-222 (376)
106 3deo_A Signal recognition part 99.9 2E-24 7E-29 126.9 9.2 101 33-134 41-143 (183)
107 2aja_A Ankyrin repeat family p 99.9 3E-27 1E-31 152.2 -4.7 122 3-131 127-255 (376)
108 1sw6_A Regulatory protein SWI6 99.9 1.2E-24 4E-29 138.1 6.4 116 8-123 101-227 (327)
109 3ui2_A Signal recognition part 99.9 6.8E-24 2.3E-28 129.8 8.8 101 33-134 42-144 (244)
110 2zgd_A 3 repeat synthetic anky 99.9 4.9E-23 1.7E-27 111.8 10.1 90 31-120 19-109 (110)
111 1dcq_A PYK2-associated protein 99.9 9.4E-23 3.2E-27 126.8 11.0 93 1-93 166-262 (278)
112 3lvq_E ARF-GAP with SH3 domain 99.9 2.2E-22 7.6E-27 133.9 11.6 96 1-96 168-268 (497)
113 2zgd_A 3 repeat synthetic anky 99.9 3.1E-22 1E-26 108.7 9.7 88 1-88 21-109 (110)
114 3jue_A Arfgap with coiled-coil 99.9 4E-22 1.4E-26 128.0 10.9 127 2-128 233-366 (368)
115 1gp8_A Protein (scaffolding pr 83.0 1.2 4.2E-05 18.6 2.1 19 7-25 16-34 (40)
116 3zrh_A Ubiquitin thioesterase 49.1 58 0.002 21.9 6.6 47 44-90 30-90 (454)
117 3qil_A Clathrin heavy chain 1; 38.6 17 0.00058 19.8 1.6 32 61-92 27-58 (125)
118 3mkq_B Coatomer subunit alpha; 36.5 63 0.0022 18.7 5.4 108 5-122 9-139 (177)
119 2vxg_A LD41624, GE-1, CG6181-P 24.4 88 0.003 17.3 3.0 25 6-30 18-42 (139)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.8e-36 Score=176.20 Aligned_cols=129 Identities=34% Similarity=0.511 Sum_probs=110.6
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
|+.|.||||.|+..++.+++++|++.+ +.+.++..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..
T Consensus 34 d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~ 113 (169)
T 4gpm_A 34 DSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAEN 113 (169)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHc
Confidence 567899999999999999999999888 5577888899999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCc
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNA 129 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~ 129 (134)
++.+++++|++.| +++.++..|.|||++|+..++.+++++|+++|++++-
T Consensus 114 g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 114 GHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred CCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 9999999999988 8888888899999999999999999999999998864
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.8e-34 Score=167.76 Aligned_cols=129 Identities=38% Similarity=0.535 Sum_probs=124.2
Q ss_pred cHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCcHHH
Q psy6445 6 SPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDI 84 (134)
Q Consensus 6 ~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 84 (134)
++|+.|++.|+.++|+.|++.| +++.++..|.|||++|+..++.++++++++.|.+++.++..|.||||+|+..++.++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence 4799999999999999999999 568899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 85 AKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 85 ~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
+++|++.| +++.++..|+|||++|+..|+.+++++|+++|++++.+|.+|
T Consensus 86 v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G 136 (169)
T 4gpm_A 86 VKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDG 136 (169)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCC
Confidence 99999999 899999999999999999999999999999999999998876
No 3
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-34 Score=179.05 Aligned_cols=134 Identities=31% Similarity=0.470 Sum_probs=128.7
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
|++|.||||+|+..|+.+++++|++.+ +....+..|.+|++.|+..++.+++++|++.|.+++.++..|.||||+|+..
T Consensus 83 d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~ 162 (269)
T 4b93_B 83 SQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSG 162 (269)
T ss_dssp CTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Confidence 578999999999999999999999999 5577889999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
|+.+++++|++.| +++..+..|.||||+|+..|+.+++++|+++|++++.+|.+|
T Consensus 163 g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G 218 (269)
T 4b93_B 163 GHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQ 218 (269)
T ss_dssp TCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTS
T ss_pred CCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC
Confidence 9999999999999 889999999999999999999999999999999999999876
No 4
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=6.2e-34 Score=168.54 Aligned_cols=134 Identities=21% Similarity=0.303 Sum_probs=127.3
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
|..|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+..
T Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 111 (192)
T 2rfm_A 32 DSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIF 111 (192)
T ss_dssp CTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence 578999999999999999999999998 4577888999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
++.+++++|++.+ +++..+..|.||||+|+..++.+++++|+++|++++.+|..|
T Consensus 112 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 167 (192)
T 2rfm_A 112 GYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTG 167 (192)
T ss_dssp TCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTS
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC
Confidence 9999999999999 888999999999999999999999999999999999988765
No 5
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=100.00 E-value=1.4e-34 Score=166.42 Aligned_cols=133 Identities=21% Similarity=0.325 Sum_probs=116.9
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCc-HHHHHHH
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSS-PLHYAAK 78 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t-~l~~a~~ 78 (134)
++.|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+ .|+.+++++|++.|.+++.++..|.| |||+|+.
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~ 87 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAR 87 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHH
Confidence 467999999999999999999999998 55778899999999985 99999999999999999999999999 9999999
Q ss_pred hCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 79 KNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 79 ~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
.++.+++++|+++| +++..+..|.|||++|+..++.+++++|+++|++++.+|..|
T Consensus 88 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 144 (156)
T 1bi7_B 88 EGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHAR 144 (156)
T ss_dssp HTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------
T ss_pred CCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCc
Confidence 99999999999999 888999999999999999999999999999999999988765
No 6
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=100.00 E-value=4e-34 Score=161.13 Aligned_cols=125 Identities=23% Similarity=0.374 Sum_probs=119.6
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCC-CCcHHHHHHH
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIV-GSSPLHYAAK 78 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~-~~t~l~~a~~ 78 (134)
|..|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+. ++.+++++|++.|.+++.++.. |.||+|+|+.
T Consensus 9 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 87 (136)
T 1d9s_A 9 GGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAR 87 (136)
T ss_dssp CCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHH
T ss_pred CCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHH
Confidence 578999999999999999999999999 557788999999999999 9999999999999999999999 9999999999
Q ss_pred hCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCC
Q psy6445 79 KNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQID 126 (134)
Q Consensus 79 ~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~ 126 (134)
.++.+++++|++.+ +++..+..+.|||++|+..++.+++++|+++|+|
T Consensus 88 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 88 EGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999 8889999999999999999999999999999986
No 7
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=3.5e-33 Score=162.04 Aligned_cols=132 Identities=23% Similarity=0.252 Sum_probs=122.3
Q ss_pred CCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCc
Q psy6445 3 VGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNK 81 (134)
Q Consensus 3 ~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~ 81 (134)
.|.||||.|+..|+.+++++|++.+ ..+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+..++
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 5889999999999999999999988 457788899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 82 LDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 82 ~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
.+++++|++.+ +.+..+..+.|||++|+..++.+++++|+++|++++.+|..|
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 135 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSG 135 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 99999999999 888889999999999999999999999999999999888765
No 8
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=100.00 E-value=6.2e-33 Score=159.00 Aligned_cols=131 Identities=28% Similarity=0.399 Sum_probs=123.1
Q ss_pred CccHHHHHHHhCCHHHHHHHHhhCcccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCcHH
Q psy6445 4 GSSPLHYAAKKNKLDIAKILIESNRCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLD 83 (134)
Q Consensus 4 g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~ 83 (134)
..+||+.|++.|+.+++++|++.+.....+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+..++.+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 81 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN 81 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHH
Confidence 46899999999999999999999965557888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 84 IAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 84 ~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
++++|++.| +++..+..|.|||++|+..++.+++++|+++|++++.+|..|
T Consensus 82 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 133 (153)
T 1awc_B 82 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFC 133 (153)
T ss_dssp HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCC
Confidence 999999999 888899999999999999999999999999999999988765
No 9
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=100.00 E-value=1.3e-32 Score=152.66 Aligned_cols=124 Identities=40% Similarity=0.710 Sum_probs=118.7
Q ss_pred CCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCc
Q psy6445 3 VGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNK 81 (134)
Q Consensus 3 ~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~ 81 (134)
+|.||||.|+..|+.+++++|++.+ +.+..+..|.+|||+|+..++.+++++|++.|.+++..+..|.||+|+|+..++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 5899999999999999999999998 457788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCC
Q psy6445 82 LDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQID 126 (134)
Q Consensus 82 ~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~ 126 (134)
.+++++|++.+ +.+..+..+.||+++|+..++.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999 8888999999999999999999999999999986
No 10
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=4.1e-33 Score=161.47 Aligned_cols=134 Identities=31% Similarity=0.467 Sum_probs=122.5
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhCc--ccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESNR--CSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAK 78 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~~--~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 78 (134)
|+.|.+||+.|++.|+.+++++|++.+. ....+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS 84 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 4678899999999999999999998663 35667778899999999999999999999999999999999999999999
Q ss_pred hCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 79 KNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 79 ~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
.++.+++++|++.+ +++..+..+.|||++|+..++.+++++|+++|++++.+|..|
T Consensus 85 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 141 (165)
T 3twr_A 85 YGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDG 141 (165)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred cCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC
Confidence 99999999999999 888889999999999999999999999999999999988765
No 11
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=4e-33 Score=162.49 Aligned_cols=129 Identities=25% Similarity=0.431 Sum_probs=64.7
Q ss_pred CCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhC
Q psy6445 2 QVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKN 80 (134)
Q Consensus 2 ~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~ 80 (134)
..|.||||+|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+..+
T Consensus 34 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 113 (172)
T 3v30_A 34 ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGN 113 (172)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 34455555555555555555555544 23444444555555555555555555555555555555555555555555555
Q ss_pred cHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcc
Q psy6445 81 KLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQ 130 (134)
Q Consensus 81 ~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~ 130 (134)
+.+++++|++.| +.+..+..+.||+++|+..++.+++++|+++|+++..+
T Consensus 114 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~ 164 (172)
T 3v30_A 114 HVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQS 164 (172)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred CHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcc
Confidence 555555555554 44444445555555555555555555555554444433
No 12
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=1.4e-32 Score=159.94 Aligned_cols=133 Identities=35% Similarity=0.489 Sum_probs=122.9
Q ss_pred CCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhC
Q psy6445 2 QVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKN 80 (134)
Q Consensus 2 ~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~ 80 (134)
..+.+||+.|++.|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+..+
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 91 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFG 91 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 34678999999999999999999998 55778889999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 81 KLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 81 ~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
+.+++++|++.+ +.+..+..+.|||++|+..++.+++++|+++|++++.+|..|
T Consensus 92 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 146 (169)
T 2y1l_E 92 HLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFG 146 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 999999999999 888889999999999999999999999999999999888765
No 13
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=3.2e-32 Score=159.65 Aligned_cols=133 Identities=19% Similarity=0.253 Sum_probs=96.7
Q ss_pred CCCccHHHHHHHhCCHHHHHHHHhhC--cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 2 QVGSSPLHYAAKKNKLDIAKILIESN--RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 2 ~~g~~~l~~a~~~~~~~~~~~ll~~~--~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
.++.++|+.|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 45667777777777777777777764 3456667777777777777777777777777777777777777777777777
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
++.+++++|++.| +++..+..|.|||++|+..++.+++++|+++|++++.+|..|
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 138 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYG 138 (179)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTS
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCC
Confidence 7777777777777 666777777777777777777777777777777777776654
No 14
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=4.7e-32 Score=164.34 Aligned_cols=133 Identities=29% Similarity=0.426 Sum_probs=86.2
Q ss_pred CCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhC
Q psy6445 2 QVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKN 80 (134)
Q Consensus 2 ~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~ 80 (134)
..|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..++.+++++|++.|.+++..+..|.||+|+|+..+
T Consensus 71 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 150 (231)
T 3aji_A 71 DAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKG 150 (231)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 45566666666666666666666655 33455556666666666666666666666666666666666666666666666
Q ss_pred cHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 81 KLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 81 ~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
+.+++++|++.+ +.+..+..|.|||++|+..++.+++++|+++|++++.+|..|
T Consensus 151 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 205 (231)
T 3aji_A 151 NLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEE 205 (231)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTS
T ss_pred CHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
Confidence 666666666666 566666666777777777777777777777777766666544
No 15
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=2e-32 Score=160.48 Aligned_cols=133 Identities=29% Similarity=0.387 Sum_probs=126.2
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
|..|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+..
T Consensus 36 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 115 (179)
T 3f6q_A 36 DDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFW 115 (179)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 568999999999999999999999999 5677889999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCccccc
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIE 133 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~ 133 (134)
++.+++++|++.| +++..+..|.||+++|+..++.+++++|++.|++++..+..
T Consensus 116 ~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~~ 170 (179)
T 3f6q_A 116 GQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYK 170 (179)
T ss_dssp TCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBCCC
T ss_pred CCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCCcc
Confidence 9999999999999 88899999999999999999999999999999999876654
No 16
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=100.00 E-value=2.3e-32 Score=153.92 Aligned_cols=123 Identities=29% Similarity=0.452 Sum_probs=116.3
Q ss_pred CCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhC
Q psy6445 2 QVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKN 80 (134)
Q Consensus 2 ~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~ 80 (134)
..+.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..++.+++++|++.|.+++..+..|.||+|+|+..+
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~ 91 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIG 91 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence 35789999999999999999999999 55778899999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcC
Q psy6445 81 KLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQ 124 (134)
Q Consensus 81 ~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g 124 (134)
+.+++++|++.| +.+..+..|.|||++|+..++.+++++|+++|
T Consensus 92 ~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 92 HLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999 88889999999999999999999999999876
No 17
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=4.3e-32 Score=166.71 Aligned_cols=133 Identities=34% Similarity=0.470 Sum_probs=95.5
Q ss_pred CCCccHHHHHHHhCCHHHHHHHHhhCc--ccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 2 QVGSSPLHYAAKKNKLDIAKILIESNR--CSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 2 ~~g~~~l~~a~~~~~~~~~~~ll~~~~--~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
..|.||||.|+..++.+++++|++.+. .+..+..|.||||+|+..++.+++++|++.|.+++..+..|.||||+|+..
T Consensus 88 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 167 (253)
T 1yyh_A 88 NMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAV 167 (253)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 456666666666666666666666552 345556667777777777777777777777777777777777777777777
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
++.+++++|++.| +++..+..|.|||++|+..++.+++++|+++|++++.+|..|
T Consensus 168 ~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g 223 (253)
T 1yyh_A 168 NNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMD 223 (253)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCC
Confidence 7777777777777 677777777788888877777788888887777777777654
No 18
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=6e-32 Score=157.51 Aligned_cols=131 Identities=21% Similarity=0.255 Sum_probs=123.1
Q ss_pred CccHHHHHHHhCCHHHHHHHHhhCc--ccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCc
Q psy6445 4 GSSPLHYAAKKNKLDIAKILIESNR--CSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNK 81 (134)
Q Consensus 4 g~~~l~~a~~~~~~~~~~~ll~~~~--~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~ 81 (134)
+.+|||.|+..|+.++++.|++.+. .+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+..++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 5689999999999999999999984 46778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 82 LDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 82 ~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
.+++++|++.+ +.+..+..+.||||+|+..++.+++++|+++|++++.+|..|
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 135 (172)
T 3v30_A 82 TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSG 135 (172)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCC
Confidence 99999999999 888899999999999999999999999999999999988765
No 19
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.2e-31 Score=162.55 Aligned_cols=134 Identities=31% Similarity=0.483 Sum_probs=122.0
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
|..|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+..
T Consensus 37 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 116 (231)
T 3aji_A 37 DQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASK 116 (231)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 567899999999999999999999988 5577788899999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
++.+++++|++.+ +++..+..+.|||++|+..++.+++++|+++|++++.+|..|
T Consensus 117 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 172 (231)
T 3aji_A 117 NRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEG 172 (231)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTS
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCC
Confidence 9999999999998 788888899999999999999999999999999999888765
No 20
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=7.2e-32 Score=165.72 Aligned_cols=134 Identities=28% Similarity=0.434 Sum_probs=127.0
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCC-CCCCCCCCCCcHHHHHHH
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQI-DVNAQDIVGSSPLHYAAK 78 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~-~~~~~~~~~~t~l~~a~~ 78 (134)
|..|.||||+|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.+. +++..+..|.||+|+|+.
T Consensus 54 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 133 (253)
T 1yyh_A 54 DRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR 133 (253)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHH
Confidence 578999999999999999999999999 567888999999999999999999999999986 888999999999999999
Q ss_pred hCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 79 KNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 79 ~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
.++.+++++|++.| +++..+..|.||||+|+..++.+++++|+++|++++.+|..|
T Consensus 134 ~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 190 (253)
T 1yyh_A 134 LAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNRE 190 (253)
T ss_dssp HTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred cChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 99999999999999 888899999999999999999999999999999999988765
No 21
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2e-31 Score=160.80 Aligned_cols=133 Identities=34% Similarity=0.470 Sum_probs=76.9
Q ss_pred CCCccHHHHHHHhCCHHHHHHHHhhCc--ccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 2 QVGSSPLHYAAKKNKLDIAKILIESNR--CSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 2 ~~g~~~l~~a~~~~~~~~~~~ll~~~~--~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
..|.||||.|+..++.+++++|++.+. ....+..|.+|||+|+..++.+++++|++.+.+++..+..|.||+|+|+..
T Consensus 56 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 135 (223)
T 2f8y_A 56 NMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAV 135 (223)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHc
Confidence 345555555555555555555555442 234445555555555555555555655555555555555566666666666
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
++.+++++|++.| +++..+..+.|||++|+..++.+++++|+++|++++.+|..|
T Consensus 136 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 191 (223)
T 2f8y_A 136 NNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMD 191 (223)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccC
Confidence 6666666666665 555555666666666666666666666666666666555443
No 22
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2e-31 Score=160.86 Aligned_cols=134 Identities=28% Similarity=0.434 Sum_probs=110.1
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCC-CCCCCCCCCCcHHHHHHH
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQI-DVNAQDIVGSSPLHYAAK 78 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~-~~~~~~~~~~t~l~~a~~ 78 (134)
|..|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.+. .++..+..+.||+|+|+.
T Consensus 22 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 101 (223)
T 2f8y_A 22 DRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR 101 (223)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHH
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHH
Confidence 467888888888888888888888887 456677888888888888888888888888865 777777888888888888
Q ss_pred hCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 79 KNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 79 ~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
.++.+++++|++.+ +++..+..+.|||++|+..++.+++++|+++|++++.+|..|
T Consensus 102 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 158 (223)
T 2f8y_A 102 LAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNRE 158 (223)
T ss_dssp HTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred hCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 88888888888887 777778888888888888888888888888888888777654
No 23
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=5.1e-32 Score=156.36 Aligned_cols=129 Identities=26% Similarity=0.420 Sum_probs=73.0
Q ss_pred CccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCcH
Q psy6445 4 GSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKL 82 (134)
Q Consensus 4 g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~ 82 (134)
..+|||.|+..|+.+++++|++.+ +.+..+..|.||||+|+. |+.+++++|++.|.+++.++..|.||+|+|+..++.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 83 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFL 83 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 445556666666666666555555 334445555555555555 555555555555555555555555555555555555
Q ss_pred HHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCC-CCccccc
Q psy6445 83 DIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQID-VNAQDIE 133 (134)
Q Consensus 83 ~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~-~~~~~~~ 133 (134)
+++++|++.+ +++..+..|.|||++|+..++.+++++|+++|++ ++.+|..
T Consensus 84 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 136 (162)
T 1ihb_A 84 DTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHK 136 (162)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTT
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCC
Confidence 5555555555 5555555555555555555555555555555555 3444433
No 24
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.9e-31 Score=161.35 Aligned_cols=134 Identities=27% Similarity=0.367 Sum_probs=105.7
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC---cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN---RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAA 77 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~---~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~ 77 (134)
|..|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..++.+++++|++.|.+++..+..|.||+|+|+
T Consensus 69 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 148 (228)
T 2dzn_A 69 DDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAA 148 (228)
T ss_dssp CTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 356778888888888888888888776 23556677888888888888888888888888888888888888888888
Q ss_pred HhCcHHHHHHHHhcC--CCCCCCCCCCChhhHHHhhCCHHHHHHHH-hcCCCCCcccccC
Q psy6445 78 KKNKLDIAKILIESN--RCSLENKMKKTPLHLAAQEGHVDMCKLLI-KHQIDVNAQDIEA 134 (134)
Q Consensus 78 ~~~~~~~~~~Ll~~~--~~~~~~~~~~t~l~~a~~~~~~~~~~~L~-~~g~~~~~~~~~g 134 (134)
..++.+++++|++.+ +.+..+..|.|||++|+..++.+++++|+ +.|++++.+|..|
T Consensus 149 ~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g 208 (228)
T 2dzn_A 149 SVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKG 208 (228)
T ss_dssp HTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTS
T ss_pred HcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCC
Confidence 888888888888777 56667778888888888888888888888 7788888877665
No 25
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.6e-31 Score=164.84 Aligned_cols=133 Identities=23% Similarity=0.302 Sum_probs=99.6
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhCcccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhC
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESNRCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKN 80 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~ 80 (134)
|..|.||||.|+..|+.+++++|++.+.....+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+..+
T Consensus 66 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 145 (261)
T 2xai_A 66 TADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQ 145 (261)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhC
Confidence 35566777777777777777777776644334455777777777777777777777777777777777888888888888
Q ss_pred cHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 81 KLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 81 ~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
+.+++++|++.| +.+ .+..|.||||+|+..++.+++++|+++|++++.+|.+|
T Consensus 146 ~~~~v~~Ll~~g~~~~-~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g 199 (261)
T 2xai_A 146 QRACVKKLLESGADVN-QGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEG 199 (261)
T ss_dssp CHHHHHHHHHHTCCTT-CCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CHHHHHHHHHcCCCCC-CCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 888888888887 554 36777888888888888888888888888888887765
No 26
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2.1e-31 Score=158.47 Aligned_cols=134 Identities=27% Similarity=0.421 Sum_probs=108.2
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHH-hcCCCCCCCCCCCCcHHHHHHH
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLI-KHQIDVNAQDIVGSSPLHYAAK 78 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~-~~~~~~~~~~~~~~t~l~~a~~ 78 (134)
|..|.||||+|+..|+.+++++|++.| +.+..+..|.||||+|+..|+.+++++|+ ..+.+++..+..|.||+|+|+.
T Consensus 36 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 115 (201)
T 3hra_A 36 DTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAE 115 (201)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHH
Confidence 457788888888888888888888887 45667778888888888888888888888 4466777788888888888888
Q ss_pred hCcHHHHHHHHhcC--CCCCCCCCCCChhhHHHhhCC-----HHHHHHHHhcCCCCCcccccC
Q psy6445 79 KNKLDIAKILIESN--RCSLENKMKKTPLHLAAQEGH-----VDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 79 ~~~~~~~~~Ll~~~--~~~~~~~~~~t~l~~a~~~~~-----~~~~~~L~~~g~~~~~~~~~g 134 (134)
.++.+++++|++.+ +.+..+..+.||||+|+..+. .+++++|+++|++++.+|..|
T Consensus 116 ~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g 178 (201)
T 3hra_A 116 KGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSG 178 (201)
T ss_dssp TTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTS
T ss_pred cCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCC
Confidence 88888888888876 566777788888888888776 788888888888888877655
No 27
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=5.6e-32 Score=164.63 Aligned_cols=133 Identities=28% Similarity=0.407 Sum_probs=76.8
Q ss_pred CCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCC------CCCCCCCCCcHHH
Q psy6445 2 QVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQID------VNAQDIVGSSPLH 74 (134)
Q Consensus 2 ~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~------~~~~~~~~~t~l~ 74 (134)
..|.||||+|+..|+.+++++|++.| +.+..+..|.||||+|+..|+.+++++|++.+.+ .+..+..|.||||
T Consensus 43 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~ 122 (236)
T 1ikn_D 43 NLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLH 122 (236)
T ss_dssp TTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHH
Confidence 44556666666666666666666655 3344555566666666666666666666665543 2334445556666
Q ss_pred HHHHhCcHHHHHHHHhcC-CCCCCCC-CCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 75 YAAKKNKLDIAKILIESN-RCSLENK-MKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 75 ~a~~~~~~~~~~~Ll~~~-~~~~~~~-~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
+|+..++.+++++|++.| +++..+. .|.||||+|+..++.+++++|+++|++++.+|..|
T Consensus 123 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 184 (236)
T 1ikn_D 123 LASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQG 184 (236)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCC
Confidence 666666666666666655 4555544 55666666666666666666666666665555443
No 28
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=7.5e-32 Score=167.43 Aligned_cols=134 Identities=23% Similarity=0.301 Sum_probs=118.3
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhCc------------------------------------------------cccc
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESNR------------------------------------------------CSLE 32 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~~------------------------------------------------~~~~ 32 (134)
|..|.||||+|+..++.+++++|++.+. .+..
T Consensus 75 ~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (282)
T 1oy3_D 75 ERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAE 154 (282)
T ss_dssp CTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCC
T ss_pred CCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCc
Confidence 4567888888888888888888887652 2345
Q ss_pred ccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCC-CCcHHHHHHHhCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHh
Q psy6445 33 NKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIV-GSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQ 110 (134)
Q Consensus 33 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~-~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~ 110 (134)
+..|.||||+|+..|+.+++++|++.|.+++..+.. |.||||+|+..++.+++++|++.| +++.++..|.|||++|+.
T Consensus 155 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~ 234 (282)
T 1oy3_D 155 NYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALL 234 (282)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHT
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHH
Confidence 678999999999999999999999999999998854 999999999999999999999999 899999999999999999
Q ss_pred hCCHHHHHHHHhcCCCCCcccccC
Q psy6445 111 EGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 111 ~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
.++.+++++|+++|++++.+|..|
T Consensus 235 ~~~~~~v~~Ll~~ga~~~~~~~~g 258 (282)
T 1oy3_D 235 RPNPILARLLRAHGAPEPEDGGDK 258 (282)
T ss_dssp SSCHHHHHHHHHTTCCCCCCC---
T ss_pred cCCcHHHHHHHHcCCCcCcCCCcc
Confidence 999999999999999999998876
No 29
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=2.2e-31 Score=166.74 Aligned_cols=134 Identities=30% Similarity=0.471 Sum_probs=119.3
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCC------------
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDI------------ 67 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~------------ 67 (134)
|..|.||||.|+..|+.+++++|++.| +.+..+..|.||||+|+..|+.+++++|++.|.+++..+.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 149 (299)
T 1s70_B 70 NVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEE 149 (299)
T ss_dssp CTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhc
Confidence 567899999999999999999999998 4577888999999999999999999999999887765542
Q ss_pred ------------------------------------------------CCCcHHHHHHHhCcHHHHHHHHhcC-CCCCCC
Q psy6445 68 ------------------------------------------------VGSSPLHYAAKKNKLDIAKILIESN-RCSLEN 98 (134)
Q Consensus 68 ------------------------------------------------~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~ 98 (134)
.|.||||+|+..++.+++++|++.| +++..+
T Consensus 150 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d 229 (299)
T 1s70_B 150 AMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKD 229 (299)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCC
T ss_pred chHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcC
Confidence 4678888999999999999999999 888889
Q ss_pred CCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 99 KMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 99 ~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
..|.||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 230 ~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g 265 (299)
T 1s70_B 230 YDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVG 265 (299)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 999999999999999999999999999999988776
No 30
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.6e-31 Score=162.11 Aligned_cols=132 Identities=26% Similarity=0.384 Sum_probs=96.5
Q ss_pred CCccHHHHHHHhCCHHHHHHHHhh-C-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCC-----CCCCCCCCcHHHH
Q psy6445 3 VGSSPLHYAAKKNKLDIAKILIES-N-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDV-----NAQDIVGSSPLHY 75 (134)
Q Consensus 3 ~g~~~l~~a~~~~~~~~~~~ll~~-~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~-----~~~~~~~~t~l~~ 75 (134)
.|.||||.|+..|+.+++++|++. + +.+..+..|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 467777777777777777777776 5 44666777777777777777777777777777665 4555667777777
Q ss_pred HHHhCcHHHHHHHHhcC-CCCCCCC-------------CCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 76 AAKKNKLDIAKILIESN-RCSLENK-------------MKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 76 a~~~~~~~~~~~Ll~~~-~~~~~~~-------------~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
|+..++.+++++|++.| +.+..+. .+.||||+|+..++.+++++|+++|++++.+|..|
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g 154 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLG 154 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Confidence 77777777777777777 5544433 57777777777777777777777777777777654
No 31
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=2.8e-31 Score=154.39 Aligned_cols=124 Identities=31% Similarity=0.541 Sum_probs=117.7
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
|..|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+..
T Consensus 44 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 123 (169)
T 2y1l_E 44 DASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMF 123 (169)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 568999999999999999999999999 5577889999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcC
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQ 124 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g 124 (134)
++.+++++|++.| +.+..+..+.||+++|+..++.+++++|++.|
T Consensus 124 ~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 124 GHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9999999999999 88889999999999999999999999999876
No 32
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.3e-31 Score=166.42 Aligned_cols=90 Identities=24% Similarity=0.302 Sum_probs=51.1
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhCc----ccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESNR----CSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYA 76 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~~----~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a 76 (134)
|+.|.||||.|+..|+.+++++|++.+. .+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||||+|
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A 85 (282)
T 1oy3_D 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLA 85 (282)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 4556666666666666666666666552 344555566666666666666666666666655555554445555444
Q ss_pred HHhCcHHHHHHHHh
Q psy6445 77 AKKNKLDIAKILIE 90 (134)
Q Consensus 77 ~~~~~~~~~~~Ll~ 90 (134)
+..++.+++++|++
T Consensus 86 ~~~~~~~~v~~Ll~ 99 (282)
T 1oy3_D 86 CRVRAHTCACVLLQ 99 (282)
T ss_dssp TTTTCHHHHHHHSS
T ss_pred HHcCCcchhHhhhc
Confidence 44444444444444
No 33
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.8e-32 Score=166.36 Aligned_cols=132 Identities=22% Similarity=0.181 Sum_probs=123.5
Q ss_pred CCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhC
Q psy6445 2 QVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKN 80 (134)
Q Consensus 2 ~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~ 80 (134)
..|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||||+|+..+
T Consensus 19 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g 98 (229)
T 2vge_A 19 LNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCN 98 (229)
T ss_dssp SCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred cchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 46788999999999999999999999 56788999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhcC-CCCCCC-CCCCChhhHH--HhhCCHHHHHHHHhcCCCCCccccc
Q psy6445 81 KLDIAKILIESN-RCSLEN-KMKKTPLHLA--AQEGHVDMCKLLIKHQIDVNAQDIE 133 (134)
Q Consensus 81 ~~~~~~~Ll~~~-~~~~~~-~~~~t~l~~a--~~~~~~~~~~~L~~~g~~~~~~~~~ 133 (134)
+.+++++|++.| +.+..+ ..|.|||++| +..++.+++++|++.|++++.+|..
T Consensus 99 ~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~ 155 (229)
T 2vge_A 99 DTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSG 155 (229)
T ss_dssp CHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGG
T ss_pred CHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCC
Confidence 999999999999 777765 6899999999 9999999999999999999888754
No 34
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=1.7e-31 Score=154.61 Aligned_cols=124 Identities=32% Similarity=0.477 Sum_probs=115.9
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
|..|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+..
T Consensus 39 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 118 (165)
T 3twr_A 39 EGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAK 118 (165)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred ccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHc
Confidence 456889999999999999999999999 5678889999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCC
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQI 125 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~ 125 (134)
++.+++++|+++| +++..+..|.||+++|+. ++.+++++|++.|+
T Consensus 119 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 119 GKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 9999999999999 888999999999999877 89999999999885
No 35
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=1.6e-31 Score=154.25 Aligned_cols=125 Identities=26% Similarity=0.378 Sum_probs=117.2
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
|..|.||||.|+. |+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+++.++..|.||+|+|+..
T Consensus 35 ~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 113 (162)
T 1ihb_A 35 NGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKE 113 (162)
T ss_dssp CTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 5689999999999 9999999999999 5577889999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcC-C-CCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCC
Q psy6445 80 NKLDIAKILIESN-R-CSLENKMKKTPLHLAAQEGHVDMCKLLIKHQID 126 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~-~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~ 126 (134)
++.+++++|++.+ + ....+..|.||+++|+..++.+++++|+++|++
T Consensus 114 ~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 114 GHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred CCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 9999999999999 4 578899999999999999999999999999985
No 36
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=1.6e-31 Score=155.00 Aligned_cols=128 Identities=27% Similarity=0.468 Sum_probs=120.8
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
|+.|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+..
T Consensus 33 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 112 (167)
T 3v31_A 33 DEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHG 112 (167)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHc
Confidence 568999999999999999999999998 5577889999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCC
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVN 128 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~ 128 (134)
++.+++++|+++| ++...+..|.||+++|+..++.+++++|++++.++.
T Consensus 113 ~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 113 NHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 9999999999999 888899999999999999999999999999876543
No 37
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.98 E-value=5.3e-31 Score=159.85 Aligned_cols=134 Identities=24% Similarity=0.345 Sum_probs=121.9
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhCcc------cccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCC-------
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESNRC------SLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDI------- 67 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~~~------~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~------- 67 (134)
|..|.||||+|+..|+.+++++|++.+.. ...+..|.||||+|+..|+.+++++|++.|.+++..+.
T Consensus 34 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~ 113 (232)
T 2rfa_A 34 GAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYR 113 (232)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeec
Confidence 57899999999999999999999999843 44567899999999999999999999999999988765
Q ss_pred ------CCCcHHHHHHHhCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHH----HHHHhcCCCCC------cc
Q psy6445 68 ------VGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMC----KLLIKHQIDVN------AQ 130 (134)
Q Consensus 68 ------~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~----~~L~~~g~~~~------~~ 130 (134)
.|.||+|+|+..++.+++++|++.| +++..+..|.||||+|+..++.+++ ++|+++|++.+ .+
T Consensus 114 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~ 193 (232)
T 2rfa_A 114 PHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVP 193 (232)
T ss_dssp TTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCC
T ss_pred ccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccC
Confidence 6999999999999999999999999 8889999999999999999999988 99999999883 56
Q ss_pred cccC
Q psy6445 131 DIEA 134 (134)
Q Consensus 131 ~~~g 134 (134)
|..|
T Consensus 194 ~~~g 197 (232)
T 2rfa_A 194 NNQG 197 (232)
T ss_dssp CTTS
T ss_pred CCCC
Confidence 6554
No 38
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.98 E-value=5.2e-31 Score=160.26 Aligned_cols=134 Identities=31% Similarity=0.416 Sum_probs=101.6
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC--cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN--RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAK 78 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~--~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 78 (134)
|..|.||||.|+..|+.+++++|++.+ ..+..+..|.+|||+|+..++.+++++|++.|.+++..+..|.||+|+|+.
T Consensus 74 ~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 153 (237)
T 3b7b_A 74 DAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAF 153 (237)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHH
Confidence 345677777777777777777777766 235566677777777777777777777777777777777777788888888
Q ss_pred hCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 79 KNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 79 ~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
.++.+++++|++.+ +++..+..|.|||++|+..++.+++++|+++|++++.+|..|
T Consensus 154 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g 210 (237)
T 3b7b_A 154 SGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEG 210 (237)
T ss_dssp HCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTS
T ss_pred CCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCC
Confidence 88888888888777 677777778888888888888888888888888887777665
No 39
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.98 E-value=6.3e-31 Score=160.14 Aligned_cols=133 Identities=22% Similarity=0.345 Sum_probs=93.5
Q ss_pred CCCccHHHHHHHhCCHHHHHHHHhhCc-----ccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCC-CCCCcHHHH
Q psy6445 2 QVGSSPLHYAAKKNKLDIAKILIESNR-----CSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQD-IVGSSPLHY 75 (134)
Q Consensus 2 ~~g~~~l~~a~~~~~~~~~~~ll~~~~-----~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~-~~~~t~l~~ 75 (134)
..|.||||.|+..++.+++++|++.+. .+..+..|.+|||+|+..++.+++++|++.|.+++..+ ..|.||+|+
T Consensus 77 ~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~ 156 (241)
T 1k1a_A 77 RHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIH 156 (241)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHH
Confidence 456666666666666666666666652 24455666777777777777777777777777776666 567777777
Q ss_pred HHHhCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 76 AAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 76 a~~~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
|+..++.+++++|++.| +++..+..|.||||+|+..++.+++++|+++|++++.+|..|
T Consensus 157 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 216 (241)
T 1k1a_A 157 AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHN 216 (241)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCC
Confidence 77777777777777777 666777777777777777777777777777777777776654
No 40
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.98 E-value=5.3e-31 Score=162.53 Aligned_cols=131 Identities=24% Similarity=0.302 Sum_probs=95.5
Q ss_pred CCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCc
Q psy6445 3 VGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNK 81 (134)
Q Consensus 3 ~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~ 81 (134)
+|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+..++
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 81 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 4777777777777777777777777 446667777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 82 LDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 82 ~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
.+++++|++.+ +.. .+..+.|||++|+..++.+++++|+++|++++.+|..|
T Consensus 82 ~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 134 (261)
T 2xai_A 82 WDCVNLLLQHGASVQ-PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHL 134 (261)
T ss_dssp HHHHHHHHHTTCCSS-CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTT
T ss_pred HHHHHHHHHCCCCCC-CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCC
Confidence 77777777777 433 34447777777777777777777777777777666554
No 41
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.98 E-value=5.5e-31 Score=150.89 Aligned_cols=120 Identities=31% Similarity=0.591 Sum_probs=114.7
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
|..|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+..
T Consensus 31 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 110 (153)
T 1awc_B 31 DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEH 110 (153)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 467999999999999999999999998 5577889999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHH
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLL 120 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L 120 (134)
++.+++++|++.| +++..+..|.||+++|+..++.+++++|
T Consensus 111 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 111 NHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999 8888999999999999999999999987
No 42
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.98 E-value=7.7e-31 Score=163.68 Aligned_cols=133 Identities=24% Similarity=0.288 Sum_probs=109.9
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
|..|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+..
T Consensus 56 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~ 135 (285)
T 3d9h_A 56 AVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVS 135 (285)
T ss_dssp SCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHH
T ss_pred CccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 467888899999999888888888888 4577788888888888888888888888888888888888888888888888
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
++.+++++|++.+ +... +..+.|||++|+..|+.+++++|+++|++++.+|..|
T Consensus 136 ~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g 190 (285)
T 3d9h_A 136 GSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHL 190 (285)
T ss_dssp TCHHHHHHHHHTTCCSSC-SCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTT
T ss_pred CHHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC
Confidence 8888888888888 4433 3447888888888888888888888888888777654
No 43
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.98 E-value=2.6e-31 Score=165.16 Aligned_cols=134 Identities=19% Similarity=0.355 Sum_probs=118.6
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhCc--ccccccCCCChhhHHH-----hhCCHHHHHHHHhcCCCCCCCCCCCCcHH
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESNR--CSLENKMKKTPLHLAA-----QEGYVDMCKLLIKHQIDVNAQDIVGSSPL 73 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~~--~~~~~~~~~~~l~~a~-----~~~~~~~~~~l~~~~~~~~~~~~~~~t~l 73 (134)
|..|.||||+|+..|+.+++++|++.+. .+..+..|.||||+|+ ..++.+++++|+..|...+..+..|.|||
T Consensus 108 d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL 187 (276)
T 4hbd_A 108 DSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTAL 187 (276)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHH
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHH
Confidence 6789999999999999999999999994 4777888999999988 66778899999999888888888889999
Q ss_pred HHHHHhCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHh-cCCCCCcccccC
Q psy6445 74 HYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIK-HQIDVNAQDIEA 134 (134)
Q Consensus 74 ~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~-~g~~~~~~~~~g 134 (134)
|+|+..++.+++++|++.| +++..+..|.||||+|+..|+.+++++|++ .|++++.+|..|
T Consensus 188 h~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g 250 (276)
T 4hbd_A 188 MLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDG 250 (276)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTS
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCC
Confidence 9999999999999999988 788888889999999999999999999998 799988888765
No 44
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.98 E-value=4.9e-31 Score=156.07 Aligned_cols=124 Identities=28% Similarity=0.381 Sum_probs=118.3
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
|..|.||||+|+..++.+++++|++.+ +.+..+..|.||||+|+..++.+++++|++.|.+++..+..|.||+|+|+..
T Consensus 65 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 144 (192)
T 2rfm_A 65 DIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKY 144 (192)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHH
T ss_pred cccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 467999999999999999999999999 5577889999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcC
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQ 124 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g 124 (134)
++.+++++|++.| ++...+..|.||+++|+..++.+++++|+++|
T Consensus 145 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 145 GRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp TCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999999 88899999999999999999999999999865
No 45
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.98 E-value=1e-30 Score=158.99 Aligned_cols=133 Identities=32% Similarity=0.455 Sum_probs=84.2
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
|+.|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+..
T Consensus 8 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 87 (237)
T 3b7b_A 8 HQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKK 87 (237)
T ss_dssp SCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHT
T ss_pred cCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Confidence 455666777777777777777666666 3455556666666666666666666666666666666666666666666666
Q ss_pred CcHHHHHHHHhcC--CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCccccc
Q psy6445 80 NKLDIAKILIESN--RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIE 133 (134)
Q Consensus 80 ~~~~~~~~Ll~~~--~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~ 133 (134)
++.+++++|++.+ +....+..+.|||++|+..++.+++++|++.|++++.+|..
T Consensus 88 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 143 (237)
T 3b7b_A 88 GHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNE 143 (237)
T ss_dssp TCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCC
Confidence 6666666666655 34445555666666666666666666666666666555543
No 46
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.98 E-value=9.9e-31 Score=163.19 Aligned_cols=133 Identities=22% Similarity=0.297 Sum_probs=99.3
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhCcccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhC
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESNRCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKN 80 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~ 80 (134)
|..|.||||.|+..|+.+++++|++.+.....+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+..+
T Consensus 122 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~ 201 (285)
T 3d9h_A 122 TADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQ 201 (285)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTT
T ss_pred CCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Confidence 34566777777777777777777776643333445777777777777777777777777777777778888888888888
Q ss_pred cHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 81 KLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 81 ~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
+.+++++|++.| +++ .+..|.|||++|+..++.+++++|+++|++++.+|.+|
T Consensus 202 ~~~~v~~Ll~~ga~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g 255 (285)
T 3d9h_A 202 QRACVKKLLESGADVN-QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEG 255 (285)
T ss_dssp CHHHHHHHHHTTCCTT-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred cHHHHHHHHHCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC
Confidence 888888888887 554 46778888888888888888888888888888877765
No 47
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.98 E-value=5.5e-31 Score=151.21 Aligned_cols=129 Identities=28% Similarity=0.406 Sum_probs=115.8
Q ss_pred CccHHHHHHHhCCHHHHHHHHhhC--cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCc
Q psy6445 4 GSSPLHYAAKKNKLDIAKILIESN--RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNK 81 (134)
Q Consensus 4 g~~~l~~a~~~~~~~~~~~ll~~~--~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~ 81 (134)
|.+||+.|+..|+.+++++|++.. +.+..+..|.||||+ +..|+.+++++|++.|.+++..+..|.||+|+|+..++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 568999999999999999999885 557778889999999 88999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 82 LDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 82 ~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
.+++++|++.| +++..+..|.||||+|+..++.+++++|++. ++++.+|..|
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g 133 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARG 133 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTS
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCC
Confidence 99999999998 8888888999999999999999999999988 8888887765
No 48
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.98 E-value=1.5e-30 Score=157.44 Aligned_cols=134 Identities=28% Similarity=0.403 Sum_probs=114.7
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhCc---ccc-cccCCCChhhHHHhhCCHHHHHHHHhcC--CCCCCCCCCCCcHHH
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESNR---CSL-ENKMKKTPLHLAAQEGYVDMCKLLIKHQ--IDVNAQDIVGSSPLH 74 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~~---~~~-~~~~~~~~l~~a~~~~~~~~~~~l~~~~--~~~~~~~~~~~t~l~ 74 (134)
|..|.||||+|+..|+.+++++|++.+. ... .+..|.||||+|+..|+.+++++|++.| .+++..+..|.||+|
T Consensus 33 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~ 112 (228)
T 2dzn_A 33 DQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLH 112 (228)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHH
Confidence 5678899999999999999999998872 233 6678889999999999999999999887 777888888899999
Q ss_pred HHHHhCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcC-CCCCcccccC
Q psy6445 75 YAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQ-IDVNAQDIEA 134 (134)
Q Consensus 75 ~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g-~~~~~~~~~g 134 (134)
+|+..++.+++++|++.| +.+..+..|.|||++|+..++.+++++|++.| ++++.+|..|
T Consensus 113 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g 174 (228)
T 2dzn_A 113 LAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQG 174 (228)
T ss_dssp HHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTS
T ss_pred HHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCC
Confidence 999999999999999888 78888888999999999999999999999988 8888887665
No 49
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=1.9e-30 Score=158.05 Aligned_cols=131 Identities=23% Similarity=0.359 Sum_probs=65.1
Q ss_pred CCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCC----CCCCCCCCCCcHHHHHH
Q psy6445 3 VGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQI----DVNAQDIVGSSPLHYAA 77 (134)
Q Consensus 3 ~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~----~~~~~~~~~~t~l~~a~ 77 (134)
.|.||||+|+..|+.+++++|++.+ +.+..+..|.+|||+|+..++.+++++|++.+. +++..+..|.||+|+|+
T Consensus 45 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~ 124 (241)
T 1k1a_A 45 LRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAV 124 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHH
T ss_pred cCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHH
Confidence 3444444444444444444444444 223334444444444444444444444444443 34444444555555555
Q ss_pred HhCcHHHHHHHHhcC-CCCCCC-CCCCChhhHHHhhCCHHHHHHHHhcCCCCCccccc
Q psy6445 78 KKNKLDIAKILIESN-RCSLEN-KMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIE 133 (134)
Q Consensus 78 ~~~~~~~~~~Ll~~~-~~~~~~-~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~ 133 (134)
..++.+++++|++.+ +....+ ..+.|||++|+..++.+++++|+++|++++.+|..
T Consensus 125 ~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 182 (241)
T 1k1a_A 125 NTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYS 182 (241)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTT
T ss_pred HcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 555555555555555 444333 44555555555555555555555555555555443
No 50
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.97 E-value=8.8e-32 Score=151.65 Aligned_cols=126 Identities=26% Similarity=0.375 Sum_probs=114.5
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
|+.|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+..
T Consensus 7 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 86 (137)
T 3c5r_A 7 NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKN 86 (137)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHc
Confidence 678999999999999999999999998 5578889999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCC
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQID 126 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~ 126 (134)
++.+++++|++.| +....+..|.||+++|+..+..+++++|.+.+..
T Consensus 87 ~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 87 GHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 9999999999999 8889999999999999999999998888776544
No 51
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=1.1e-30 Score=158.95 Aligned_cols=128 Identities=25% Similarity=0.325 Sum_probs=120.4
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhCc-------ccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCC-CCCcH
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESNR-------CSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDI-VGSSP 72 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~~-------~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-~~~t~ 72 (134)
|..|.||||+|+..|+.+++++|++.+. ....+..|.||||+|+..|+.+++++|++.|.+++..+. .|.||
T Consensus 75 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tp 154 (236)
T 1ikn_D 75 DFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTA 154 (236)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCH
Confidence 5689999999999999999999999884 356678899999999999999999999999999999987 89999
Q ss_pred HHHHHHhCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCC
Q psy6445 73 LHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVN 128 (134)
Q Consensus 73 l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~ 128 (134)
+|+|+..++.+++++|+++| +++..+..|.||+++|+..++.+++++|+++|++..
T Consensus 155 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 155 LHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 99999999999999999999 889999999999999999999999999999999765
No 52
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.9e-31 Score=163.95 Aligned_cols=134 Identities=19% Similarity=0.236 Sum_probs=121.8
Q ss_pred CCCCccHHHHHHHh---CCHHHHHHHHhhCcc-c-----------ccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCC
Q psy6445 1 RQVGSSPLHYAAKK---NKLDIAKILIESNRC-S-----------LENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQ 65 (134)
Q Consensus 1 ~~~g~~~l~~a~~~---~~~~~~~~ll~~~~~-~-----------~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~ 65 (134)
|..|.||||+|+.. |+.+++++|++.+.. . ..+..|.||||+|+..|+.+++++|++.|.+++..
T Consensus 40 d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 119 (256)
T 2etb_A 40 GSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLR 119 (256)
T ss_dssp TTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc
Confidence 56899999999999 999999999998832 2 13467999999999999999999999999999998
Q ss_pred CCC-------------CCcHHHHHHHhCcHHHHHHHHh---cC-CCCCCCCCCCChhhHHHh--hCCHH-------HHHH
Q psy6445 66 DIV-------------GSSPLHYAAKKNKLDIAKILIE---SN-RCSLENKMKKTPLHLAAQ--EGHVD-------MCKL 119 (134)
Q Consensus 66 ~~~-------------~~t~l~~a~~~~~~~~~~~Ll~---~~-~~~~~~~~~~t~l~~a~~--~~~~~-------~~~~ 119 (134)
+.. |.||||+|+..++.+++++|++ .| +++..+..|.||||+|+. .++.+ ++++
T Consensus 120 ~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~ 199 (256)
T 2etb_A 120 ACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDG 199 (256)
T ss_dssp CCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHH
T ss_pred cccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHH
Confidence 876 9999999999999999999999 88 888999999999999998 78888 9999
Q ss_pred HHhcCCCC-------CcccccC
Q psy6445 120 LIKHQIDV-------NAQDIEA 134 (134)
Q Consensus 120 L~~~g~~~-------~~~~~~g 134 (134)
|+++|+++ +.+|..|
T Consensus 200 Ll~~ga~~~~~~~~~~~~d~~g 221 (256)
T 2etb_A 200 LLQMGARLCPTVQLEEISNHQG 221 (256)
T ss_dssp HHHHHHHHSTTCCGGGCCCTTS
T ss_pred HHHcCCCcccccccccccCCCC
Confidence 99999999 7777765
No 53
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=1.7e-30 Score=170.04 Aligned_cols=134 Identities=35% Similarity=0.571 Sum_probs=119.4
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
|..|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||||+|+..
T Consensus 242 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 321 (437)
T 1n11_A 242 SVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHY 321 (437)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHS
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHc
Confidence 356888899999999999999888888 4567788899999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
++.+++++|++.| +++..+..|.|||++|+..++.+++++|+++|++++.+|..|
T Consensus 322 g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g 377 (437)
T 1n11_A 322 GNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDG 377 (437)
T ss_dssp SCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSS
T ss_pred CcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCC
Confidence 9999999999998 888888899999999999999999999999999999888765
No 54
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=6.5e-31 Score=162.97 Aligned_cols=131 Identities=22% Similarity=0.410 Sum_probs=115.4
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-ccccccc--------------CCCChhhHHHhhCCHHHHHHHHh---cCCCC
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENK--------------MKKTPLHLAAQEGYVDMCKLLIK---HQIDV 62 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~--------------~~~~~l~~a~~~~~~~~~~~l~~---~~~~~ 62 (134)
|..|.||||+|+..|+.+++++|++.| +.+..+. .|.||||+|+..|+.+++++|++ .|.++
T Consensus 98 d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~ 177 (273)
T 2pnn_A 98 YYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADI 177 (273)
T ss_dssp TTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCT
T ss_pred cCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCc
Confidence 358999999999999999999999999 4455555 79999999999999999999999 99999
Q ss_pred CCCCCCCCcHHHHHHHhCc---------HHHHHHHHhcC-CCC-------CCCCCCCChhhHHHhhCCHHHHHHHHhcCC
Q psy6445 63 NAQDIVGSSPLHYAAKKNK---------LDIAKILIESN-RCS-------LENKMKKTPLHLAAQEGHVDMCKLLIKHQI 125 (134)
Q Consensus 63 ~~~~~~~~t~l~~a~~~~~---------~~~~~~Ll~~~-~~~-------~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~ 125 (134)
+.++..|.||||+|+..++ .+++++|++.| +++ ..+..|.|||++|+..|+.+++++|+++|+
T Consensus 178 ~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga 257 (273)
T 2pnn_A 178 SARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREI 257 (273)
T ss_dssp TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCC
Confidence 9999999999999999998 89999999998 553 588999999999999999999999999998
Q ss_pred -CCCccc
Q psy6445 126 -DVNAQD 131 (134)
Q Consensus 126 -~~~~~~ 131 (134)
++....
T Consensus 258 ~dp~~~~ 264 (273)
T 2pnn_A 258 HEPECRH 264 (273)
T ss_dssp C------
T ss_pred CCchhhh
Confidence 665543
No 55
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.97 E-value=1.2e-31 Score=161.97 Aligned_cols=133 Identities=26% Similarity=0.328 Sum_probs=112.2
Q ss_pred CCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHh
Q psy6445 2 QVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKH-QIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 2 ~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~-~~~~~~~~~~~~t~l~~a~~~ 79 (134)
..|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++. |.+++.++..|.||||+|+..
T Consensus 71 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~ 150 (222)
T 3ehr_A 71 ESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWK 150 (222)
T ss_dssp EEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHH
T ss_pred cccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHc
Confidence 46789999999999999999999998 5577889999999999999999999999999 999999999999999999999
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
++.+++++|++.| +.+..+..|.||+++|+..+..++++.|+..|+....++.+|
T Consensus 151 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~ 206 (222)
T 3ehr_A 151 GYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAED 206 (222)
T ss_dssp TCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred CCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence 9999999999999 889999999999999999999999999999999998877654
No 56
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=3.4e-31 Score=168.05 Aligned_cols=134 Identities=17% Similarity=0.188 Sum_probs=122.0
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCC---HHHHHHHHhcC-CCCCCCCCCCCcHHHH
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGY---VDMCKLLIKHQ-IDVNAQDIVGSSPLHY 75 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~---~~~~~~l~~~~-~~~~~~~~~~~t~l~~ 75 (134)
|+.|.||||+|+..|+.+++++|+++| +.+..+..|.||||+|+..|+ .++++.|++.+ .+++..+..|.||||+
T Consensus 128 d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~ 207 (327)
T 1sw6_A 128 DEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHH 207 (327)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHH
Confidence 578999999999999999999999999 568889999999999999998 67888888875 6788899999999999
Q ss_pred HHH----hCcHHHHHHHHhcC----------------------------------------------CCCCCCCCCCChh
Q psy6445 76 AAK----KNKLDIAKILIESN----------------------------------------------RCSLENKMKKTPL 105 (134)
Q Consensus 76 a~~----~~~~~~~~~Ll~~~----------------------------------------------~~~~~~~~~~t~l 105 (134)
|+. .++.+++++|++.+ +++..+..|.|||
T Consensus 208 A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpL 287 (327)
T 1sw6_A 208 IIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCL 287 (327)
T ss_dssp HHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHH
T ss_pred HHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHH
Confidence 999 89999999998763 3667788999999
Q ss_pred hHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 106 HLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 106 ~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
|+|+..|+.+++++|+++|++++.+|..|
T Consensus 288 h~A~~~g~~~~v~~Ll~~Gad~~~~d~~G 316 (327)
T 1sw6_A 288 NIAARLGNISIVDALLDYGADPFIANKSG 316 (327)
T ss_dssp HHHHHHCCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCCCC
Confidence 99999999999999999999999999876
No 57
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=3.9e-30 Score=147.65 Aligned_cols=122 Identities=27% Similarity=0.430 Sum_probs=115.4
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
|+.|.||||. +..|+.+++++|++.| +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+..
T Consensus 33 ~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 111 (156)
T 1bd8_A 33 NRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQE 111 (156)
T ss_dssp CTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHH
T ss_pred CCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHh
Confidence 5689999999 9999999999999999 5678889999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcCCCCCCCCCCCChhhHHHhhCCHHHHHHHHhc
Q psy6445 80 NKLDIAKILIESNRCSLENKMKKTPLHLAAQEGHVDMCKLLIKH 123 (134)
Q Consensus 80 ~~~~~~~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~ 123 (134)
++.+++++|++..+.+..+..|.||+++|+..++.+++++|+++
T Consensus 112 ~~~~~v~~Ll~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 112 GHTAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp TCHHHHHHHHTTSCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred ChHHHHHHHHhccCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 99999999998877778899999999999999999999999864
No 58
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=1.3e-29 Score=150.69 Aligned_cols=134 Identities=23% Similarity=0.365 Sum_probs=124.1
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC--cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN--RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAK 78 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~--~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 78 (134)
+..+.||||.|+..|+.+.++.|+..+ +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 81 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGA 81 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 357899999999999999999999987 457788899999999999999999999999999999999999999999999
Q ss_pred hCcHHHHHHHHh-cC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcC-CCCCcccccC
Q psy6445 79 KNKLDIAKILIE-SN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQ-IDVNAQDIEA 134 (134)
Q Consensus 79 ~~~~~~~~~Ll~-~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g-~~~~~~~~~g 134 (134)
.++.+++++|++ .+ +.+..+..+.|||++|+..++.+++++|++.| ++++.+|..|
T Consensus 82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g 140 (201)
T 3hra_A 82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFG 140 (201)
T ss_dssp TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTS
T ss_pred cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCC
Confidence 999999999995 44 77888999999999999999999999999999 9999888765
No 59
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=4.1e-30 Score=164.96 Aligned_cols=103 Identities=24% Similarity=0.339 Sum_probs=85.7
Q ss_pred cccCCCChhhHHHhhC--CHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhcC-C-----CCCCCCCCCC
Q psy6445 32 ENKMKKTPLHLAAQEG--YVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN-R-----CSLENKMKKT 103 (134)
Q Consensus 32 ~~~~~~~~l~~a~~~~--~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~-----~~~~~~~~~t 103 (134)
.+..|.||||+|+..| +.+++++|++.|.+++..+..|.||||+|+..++.+++++|++.+ + .+..+..|.|
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t 213 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNS 213 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCc
Confidence 5667888888888888 888888888888888888888888888888888888888888877 5 6777788888
Q ss_pred hhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 104 PLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 104 ~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
|||+|+..|+.+++++|+++|++++.+|..|
T Consensus 214 ~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g 244 (364)
T 3ljn_A 214 HLHWAILINWEDVAMRFVEMGIDVNMEDNEH 244 (364)
T ss_dssp TTHHHHTTTCHHHHHHHHTTTCCTTCCCTTS
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Confidence 8888888888888888888888888877665
No 60
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=1.2e-29 Score=161.60 Aligned_cols=74 Identities=27% Similarity=0.449 Sum_probs=45.4
Q ss_pred CCCCCCCCCCcHHHHHHHhCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 61 DVNAQDIVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 61 ~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
+++.++..|.||+|+|+..++.+++++|+++| +++..+..|.|||++|+..++.+++++|+++|++++.+|..|
T Consensus 239 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g 313 (351)
T 3utm_A 239 NVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQG 313 (351)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCC
Confidence 33444455566666666666666666666666 555566666666666666666666666666666666665544
No 61
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=7.9e-31 Score=161.50 Aligned_cols=134 Identities=23% Similarity=0.254 Sum_probs=120.1
Q ss_pred CCCCccHHHHHH---HhCCHHHHHHHHhhCc------------ccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCC
Q psy6445 1 RQVGSSPLHYAA---KKNKLDIAKILIESNR------------CSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQ 65 (134)
Q Consensus 1 ~~~g~~~l~~a~---~~~~~~~~~~ll~~~~------------~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~ 65 (134)
|..|.||||.|+ +.|+.+++++|++.+. ....+..|.||||+|+..|+.+++++|++.|.+++..
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 122 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQ 122 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcc
Confidence 367999999999 7899999999999872 1233458999999999999999999999999999998
Q ss_pred C--------------CCCCcHHHHHHHhCcHHHHHHHHh---cC-CCCCCCCCCCChhhHHHhhCC---------HHHHH
Q psy6445 66 D--------------IVGSSPLHYAAKKNKLDIAKILIE---SN-RCSLENKMKKTPLHLAAQEGH---------VDMCK 118 (134)
Q Consensus 66 ~--------------~~~~t~l~~a~~~~~~~~~~~Ll~---~~-~~~~~~~~~~t~l~~a~~~~~---------~~~~~ 118 (134)
+ ..|.||||+|+..++.+++++|++ .| +++..+..|.||||+|+..++ .++++
T Consensus 123 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~ 202 (260)
T 3jxi_A 123 ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYD 202 (260)
T ss_dssp CEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHH
T ss_pred ccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHH
Confidence 8 579999999999999999999999 88 888999999999999998887 79999
Q ss_pred HHHhcCCCC-------CcccccC
Q psy6445 119 LLIKHQIDV-------NAQDIEA 134 (134)
Q Consensus 119 ~L~~~g~~~-------~~~~~~g 134 (134)
+|+++|+++ +.+|..|
T Consensus 203 ~Ll~~ga~~~~~~~~~~~~d~~g 225 (260)
T 3jxi_A 203 LLLIKCAKLFPDTNLEALLNNDG 225 (260)
T ss_dssp HHHHHHHHHCTTCCGGGCCCTTS
T ss_pred HHHHhCcccccccchhhcccCCC
Confidence 999999988 5677655
No 62
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=6.5e-31 Score=160.38 Aligned_cols=128 Identities=26% Similarity=0.299 Sum_probs=71.4
Q ss_pred CccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCcH
Q psy6445 4 GSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKL 82 (134)
Q Consensus 4 g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~ 82 (134)
|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+++.++..|.||||+|+..++.
T Consensus 37 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~ 116 (239)
T 1ycs_B 37 PLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNV 116 (239)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred hhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 455555555555555555555555 3344555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHhcC-CCCCCCCCCC-ChhhHH--HhhCCHHHHHHHHhcCCCCCccc
Q psy6445 83 DIAKILIESN-RCSLENKMKK-TPLHLA--AQEGHVDMCKLLIKHQIDVNAQD 131 (134)
Q Consensus 83 ~~~~~Ll~~~-~~~~~~~~~~-t~l~~a--~~~~~~~~~~~L~~~g~~~~~~~ 131 (134)
+++++|+++| +.+..+..+. ||+++| +..|+.+++++|++.|++++..+
T Consensus 117 ~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~ 169 (239)
T 1ycs_B 117 QVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMN 169 (239)
T ss_dssp HHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTG
T ss_pred HHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccc
Confidence 5555555555 4444444444 555555 44555555555555555554443
No 63
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=7.5e-30 Score=167.03 Aligned_cols=133 Identities=32% Similarity=0.508 Sum_probs=95.6
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
|+.|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+++.++..|.||||+|+..
T Consensus 11 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 90 (437)
T 1n11_A 11 GESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARI 90 (437)
T ss_dssp ----CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHC
Confidence 456778888888888888888888777 4456667777777777777777777777777777777777777777777777
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCccccc
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIE 133 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~ 133 (134)
|+.+++++|++.| +++..+..+.|||++|+..|+.+++++|++.+++.+..+..
T Consensus 91 g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 145 (437)
T 1n11_A 91 GHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKK 145 (437)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT
T ss_pred CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCC
Confidence 7777777777777 66666667777777777777777777777776666555443
No 64
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=1.5e-29 Score=157.02 Aligned_cols=132 Identities=27% Similarity=0.366 Sum_probs=124.4
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhh-C-cccccccCCCChhhHHHhhCC----HHHHHHHHhcCCCCCCCCCCCCcHHH
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIES-N-RCSLENKMKKTPLHLAAQEGY----VDMCKLLIKHQIDVNAQDIVGSSPLH 74 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~-~-~~~~~~~~~~~~l~~a~~~~~----~~~~~~l~~~~~~~~~~~~~~~t~l~ 74 (134)
|+.|.||||.|+..|+.+++++|++. + +.+..+..|.+|||.|+..++ .+++++|++.|.+++.++..|.||+|
T Consensus 145 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~ 224 (285)
T 1wdy_A 145 RKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLI 224 (285)
T ss_dssp TCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHH
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHH
Confidence 35689999999999999999999997 6 557788999999999999999 89999999999999999999999999
Q ss_pred HHHHhCcHHHHHHHHh-cC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccc
Q psy6445 75 YAAKKNKLDIAKILIE-SN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDI 132 (134)
Q Consensus 75 ~a~~~~~~~~~~~Ll~-~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~ 132 (134)
+|+..++.+++++|++ .+ +++..+..|.|||++|+..++.+++++|+++|++++.+|.
T Consensus 225 ~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d~ 284 (285)
T 1wdy_A 225 LAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284 (285)
T ss_dssp HHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred HHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccc
Confidence 9999999999999999 67 8888999999999999999999999999999999999885
No 65
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=2.2e-30 Score=159.23 Aligned_cols=126 Identities=28% Similarity=0.414 Sum_probs=116.3
Q ss_pred CCCccHHHHHHHhCCHHHHHHHHhhC-cccccccC-------------CCChhhHHHhhCCHHHHHHHHh---cCCCCCC
Q psy6445 2 QVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKM-------------KKTPLHLAAQEGYVDMCKLLIK---HQIDVNA 64 (134)
Q Consensus 2 ~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~-------------~~~~l~~a~~~~~~~~~~~l~~---~~~~~~~ 64 (134)
..|.||||+|+..|+.+++++|++.| +.+..+.. |.||||+|+..|+.+++++|++ .|.+++.
T Consensus 88 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~ 167 (256)
T 2etb_A 88 YQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEA 167 (256)
T ss_dssp TTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC
T ss_pred ccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCc
Confidence 56999999999999999999999999 44555554 9999999999999999999999 9999999
Q ss_pred CCCCCCcHHHHHHH--hCcHH-------HHHHHHhcC-CC-------CCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCC
Q psy6445 65 QDIVGSSPLHYAAK--KNKLD-------IAKILIESN-RC-------SLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDV 127 (134)
Q Consensus 65 ~~~~~~t~l~~a~~--~~~~~-------~~~~Ll~~~-~~-------~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~ 127 (134)
++..|.||||+|+. .++.+ ++++|++.| ++ +..+..|.|||++|+..|+.+++++|+++|.+.
T Consensus 168 ~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 168 TDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 99999999999999 78888 999999999 66 788999999999999999999999999998654
No 66
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=1.7e-30 Score=160.05 Aligned_cols=126 Identities=23% Similarity=0.337 Sum_probs=115.9
Q ss_pred CCCccHHHHHHHhCCHHHHHHHHhhC-cccccc--------------cCCCChhhHHHhhCCHHHHHHHHh---cCCCCC
Q psy6445 2 QVGSSPLHYAAKKNKLDIAKILIESN-RCSLEN--------------KMKKTPLHLAAQEGYVDMCKLLIK---HQIDVN 63 (134)
Q Consensus 2 ~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~--------------~~~~~~l~~a~~~~~~~~~~~l~~---~~~~~~ 63 (134)
..|.||||+|+..|+.+++++|++.| +.+..+ ..|.||||+|+..|+.+++++|++ .|.+++
T Consensus 91 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~ 170 (260)
T 3jxi_A 91 YRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLR 170 (260)
T ss_dssp EESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCc
Confidence 47999999999999999999999999 445555 579999999999999999999999 999999
Q ss_pred CCCCCCCcHHHHHHHhCc---------HHHHHHHHhcC-CC-------CCCCCCCCChhhHHHhhCCHHHHHHHHhcCCC
Q psy6445 64 AQDIVGSSPLHYAAKKNK---------LDIAKILIESN-RC-------SLENKMKKTPLHLAAQEGHVDMCKLLIKHQID 126 (134)
Q Consensus 64 ~~~~~~~t~l~~a~~~~~---------~~~~~~Ll~~~-~~-------~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~ 126 (134)
.++..|.||||+|+..++ .+++++|++.| ++ +..+..|.|||++|+..|+.+++++|+++|.+
T Consensus 171 ~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 250 (260)
T 3jxi_A 171 RQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIA 250 (260)
T ss_dssp CCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence 999999999999999887 79999999998 55 57899999999999999999999999999865
Q ss_pred C
Q psy6445 127 V 127 (134)
Q Consensus 127 ~ 127 (134)
.
T Consensus 251 ~ 251 (260)
T 3jxi_A 251 D 251 (260)
T ss_dssp H
T ss_pred c
Confidence 4
No 67
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=2.3e-30 Score=160.53 Aligned_cols=129 Identities=23% Similarity=0.303 Sum_probs=117.6
Q ss_pred CCCCccHHHHHHHh---CCHHHHHHHHhhCcc--------c----ccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCC
Q psy6445 1 RQVGSSPLHYAAKK---NKLDIAKILIESNRC--------S----LENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQ 65 (134)
Q Consensus 1 ~~~g~~~l~~a~~~---~~~~~~~~ll~~~~~--------~----~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~ 65 (134)
|..|.||||+|+.. |+.+++++|++.+.. + ..+..|.||||+|+..|+.+++++|++.|.+++..
T Consensus 51 ~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~ 130 (273)
T 2pnn_A 51 PETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAA 130 (273)
T ss_dssp TTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcc
Confidence 46899999999987 999999999998731 1 24568999999999999999999999999999998
Q ss_pred CC--------------CCCcHHHHHHHhCcHHHHHHHHh---cC-CCCCCCCCCCChhhHHHhhCC---------HHHHH
Q psy6445 66 DI--------------VGSSPLHYAAKKNKLDIAKILIE---SN-RCSLENKMKKTPLHLAAQEGH---------VDMCK 118 (134)
Q Consensus 66 ~~--------------~~~t~l~~a~~~~~~~~~~~Ll~---~~-~~~~~~~~~~t~l~~a~~~~~---------~~~~~ 118 (134)
+. .|.||||+|+..++.+++++|++ .| +++..+..|.||||+|+..++ .++++
T Consensus 131 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~ 210 (273)
T 2pnn_A 131 ANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYN 210 (273)
T ss_dssp BCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHH
Confidence 86 79999999999999999999999 88 888999999999999999888 79999
Q ss_pred HHHhcCCCCCc
Q psy6445 119 LLIKHQIDVNA 129 (134)
Q Consensus 119 ~L~~~g~~~~~ 129 (134)
+|+++|++++.
T Consensus 211 ~Ll~~ga~~n~ 221 (273)
T 2pnn_A 211 EILILGAKLHP 221 (273)
T ss_dssp HHHHHHHHHCT
T ss_pred HHHHhhhhccc
Confidence 99999999863
No 68
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=9.5e-31 Score=159.65 Aligned_cols=133 Identities=23% Similarity=0.219 Sum_probs=95.3
Q ss_pred CCCccHHHHHHHhCCHHHHHHHHhhCcccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCc
Q psy6445 2 QVGSSPLHYAAKKNKLDIAKILIESNRCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNK 81 (134)
Q Consensus 2 ~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~ 81 (134)
..|.||||.|++.++.+.++.|+++|.....+..+.+|||.|+..|+.+++++|++.|.+++..+..|.||||+|+..++
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~ 82 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGH 82 (239)
T ss_dssp ----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTC
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcccCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 46899999999999999999999999554455778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 82 LDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 82 ~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
.+++++|+++| +++..+..|.||||+|+..++.+++++|+++|++++.++..|
T Consensus 83 ~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~ 136 (239)
T 1ycs_B 83 TEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSD 136 (239)
T ss_dssp HHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSS
T ss_pred HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCC
Confidence 99999999999 888999999999999999999999999999999999888654
No 69
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=9.8e-30 Score=159.25 Aligned_cols=132 Identities=33% Similarity=0.390 Sum_probs=120.8
Q ss_pred CCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCc
Q psy6445 3 VGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNK 81 (134)
Q Consensus 3 ~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~ 81 (134)
.|.|||+.|+..|+.+++++|++.| +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||||+|+..++
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~ 118 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGY 118 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Confidence 5679999999999999999999999 557788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcC-CCCCCC------------------------------------------------------------CC
Q psy6445 82 LDIAKILIESN-RCSLEN------------------------------------------------------------KM 100 (134)
Q Consensus 82 ~~~~~~Ll~~~-~~~~~~------------------------------------------------------------~~ 100 (134)
.+++++|++.| +....+ ..
T Consensus 119 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 198 (299)
T 1s70_B 119 LDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKS 198 (299)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTT
T ss_pred HHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCC
Confidence 99999999988 554433 34
Q ss_pred CCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 101 KKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 101 ~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
+.||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 199 g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g 232 (299)
T 1s70_B 199 GGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDG 232 (299)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTC
T ss_pred CCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCC
Confidence 7788999999999999999999999999998765
No 70
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=3.6e-29 Score=155.32 Aligned_cols=132 Identities=34% Similarity=0.427 Sum_probs=80.5
Q ss_pred CCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhC
Q psy6445 2 QVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKN 80 (134)
Q Consensus 2 ~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~ 80 (134)
..|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+++|+..+
T Consensus 37 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 116 (285)
T 1wdy_A 37 EGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYG 116 (285)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTT
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhC
Confidence 34566666666666666666666666 33455566666666666666666666666666666666666666666666666
Q ss_pred cHHHHHHHHhcC-CCCCC----------CCCCCChhhHHHhhCCHHHHHHHHhc-CCCCCccccc
Q psy6445 81 KLDIAKILIESN-RCSLE----------NKMKKTPLHLAAQEGHVDMCKLLIKH-QIDVNAQDIE 133 (134)
Q Consensus 81 ~~~~~~~Ll~~~-~~~~~----------~~~~~t~l~~a~~~~~~~~~~~L~~~-g~~~~~~~~~ 133 (134)
+.+++++|++.+ +.... +..+.|||++|+..++.+++++|++. |++++.+|..
T Consensus 117 ~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 181 (285)
T 1wdy_A 117 KVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNM 181 (285)
T ss_dssp CHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTT
T ss_pred CHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCC
Confidence 666666666665 44333 44556666666666666666666654 6666555543
No 71
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=6.5e-31 Score=164.03 Aligned_cols=125 Identities=22% Similarity=0.285 Sum_probs=85.7
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhCc-ccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESNR-CSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
|..|.||||+|+..|+.+++++|++.+. .+.. +|.||||+|+..|+.+++++|++.|.+++..+..|.||||+|+..
T Consensus 28 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~ 105 (285)
T 3kea_A 28 DVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDS 105 (285)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHc
Confidence 4567777777777777777777777763 2322 467777777777777777777777777777777777777777777
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCC-CChhhHHHhhCCHHHHHHHHhcCCCC
Q psy6445 80 NKLDIAKILIESN-RCSLENKMK-KTPLHLAAQEGHVDMCKLLIKHQIDV 127 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~-~t~l~~a~~~~~~~~~~~L~~~g~~~ 127 (134)
++.+++++|++.| +++..+..+ .|||++|+..++.+++++|+++|++.
T Consensus 106 g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~ 155 (285)
T 3kea_A 106 GNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST 155 (285)
T ss_dssp TCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT
T ss_pred CCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc
Confidence 7777777777776 566666666 56666666666666666666666555
No 72
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=8.4e-30 Score=159.01 Aligned_cols=133 Identities=23% Similarity=0.277 Sum_probs=121.7
Q ss_pred CCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCC-CcHHHHHHHh
Q psy6445 2 QVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVG-SSPLHYAAKK 79 (134)
Q Consensus 2 ~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~-~t~l~~a~~~ 79 (134)
.+|.||||+|+..|+.+++++|++.| +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..| .||+|+|+..
T Consensus 60 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~ 139 (285)
T 3kea_A 60 LENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVML 139 (285)
T ss_dssp CTTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHc
Confidence 35899999999999999999999999 557788999999999999999999999999999999999998 7999999999
Q ss_pred CcHHHHHHHHhcCCCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 80 NKLDIAKILIESNRCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 80 ~~~~~~~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
++.+++++|++.+........|.|||++|+..++.+++++|+++|++++.+|..|
T Consensus 140 ~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g 194 (285)
T 3kea_A 140 NDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLL 194 (285)
T ss_dssp TCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCB
T ss_pred CCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCC
Confidence 9999999999999332222378999999999999999999999999999988765
No 73
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=3.7e-30 Score=165.13 Aligned_cols=128 Identities=23% Similarity=0.290 Sum_probs=121.0
Q ss_pred CCCccHHHHHHHhC--CHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCC-----CCCCCCCCCcHH
Q psy6445 2 QVGSSPLHYAAKKN--KLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQID-----VNAQDIVGSSPL 73 (134)
Q Consensus 2 ~~g~~~l~~a~~~~--~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~-----~~~~~~~~~t~l 73 (134)
..|.||||+|+..| +.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+ ++..+..|.|||
T Consensus 136 ~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L 215 (364)
T 3ljn_A 136 CKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHL 215 (364)
T ss_dssp ESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTT
T ss_pred CCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHH
Confidence 47999999999999 999999999999 5678899999999999999999999999999988 999999999999
Q ss_pred HHHHHhCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCc
Q psy6445 74 HYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNA 129 (134)
Q Consensus 74 ~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~ 129 (134)
|+|+..++.+++++|+++| +++..+..|.|||++|+..|+.+++++|+++|++++.
T Consensus 216 ~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~ 272 (364)
T 3ljn_A 216 HWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLI 272 (364)
T ss_dssp HHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhh
Confidence 9999999999999999999 8899999999999999999999999999999877643
No 74
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.97 E-value=6.4e-30 Score=141.62 Aligned_cols=112 Identities=20% Similarity=0.273 Sum_probs=103.1
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
+..|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..++.+++++|++.|.+++.++..|.||+|+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 357899999999999999999999998 5577889999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhC
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEG 112 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~ 112 (134)
++.+++++|++.+ +.+..+..|.||+++|...+
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHH
Confidence 9999999999999 88899999999999995443
No 75
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=6.6e-30 Score=158.33 Aligned_cols=134 Identities=26% Similarity=0.394 Sum_probs=104.7
Q ss_pred CCCCccHHHHHHHhCCHH-HHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q psy6445 1 RQVGSSPLHYAAKKNKLD-IAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAK 78 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~-~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 78 (134)
|..|.|||+.|+..+..+ ++++|++.| +++..+..|.||||+|+..|+.+++++|++.+.+++..+..|.||+++|+.
T Consensus 49 ~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~ 128 (269)
T 4b93_B 49 DPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQ 128 (269)
T ss_dssp --------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccc
Confidence 356889999999988765 788999999 568889999999999999999999999999999999999999999999999
Q ss_pred hCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 79 KNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 79 ~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
.++.+++++|++.| +++..+..|.|||++|+..|+.+++++|+++|++++.++..|
T Consensus 129 ~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g 185 (269)
T 4b93_B 129 QGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKG 185 (269)
T ss_dssp HTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTS
T ss_pred cChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCC
Confidence 99999999999999 889999999999999999999999999999999999988765
No 76
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=8.7e-29 Score=150.36 Aligned_cols=134 Identities=25% Similarity=0.309 Sum_probs=108.9
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHH
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQD-IVGSSPLHYAAK 78 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~-~~~~t~l~~a~~ 78 (134)
|..|.+||+.|++.|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.+.+++... ..+.||+++|+.
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~ 85 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATR 85 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHH
T ss_pred ccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHH
Confidence 567788888888888888888888887 446677788888888888888888888888887776544 347888888888
Q ss_pred hCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 79 KNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 79 ~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
.++.+++++|++.+ +....+..+.|||++|+..++.+++++|+++|++++.++..|
T Consensus 86 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g 142 (240)
T 3eu9_A 86 QGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNG 142 (240)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred cCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCC
Confidence 88888888888888 777777888888888888888888888888888888776654
No 77
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.97 E-value=1.4e-30 Score=153.48 Aligned_cols=128 Identities=16% Similarity=0.152 Sum_probs=79.4
Q ss_pred CCccHHHHHHHhCCH----HHHHHHHhhC-cccccccCCCChhhHHHhhCC------HHHHHHHHhcCCCCCCCCCCCC-
Q psy6445 3 VGSSPLHYAAKKNKL----DIAKILIESN-RCSLENKMKKTPLHLAAQEGY------VDMCKLLIKHQIDVNAQDIVGS- 70 (134)
Q Consensus 3 ~g~~~l~~a~~~~~~----~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~------~~~~~~l~~~~~~~~~~~~~~~- 70 (134)
.|.||||+|+..++. +++++|++.| +++.++..|.||||+|+..++ .+++++|++.|++++.+|..|.
T Consensus 37 ~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~t 116 (186)
T 3t8k_A 37 LKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKI 116 (186)
T ss_dssp HTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTB
T ss_pred CCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCc
Confidence 466666666666653 3666666666 345566666666666666655 3566666666666666666666
Q ss_pred cHHHHHHHh-----CcHHHHHHHHh-cC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcc
Q psy6445 71 SPLHYAAKK-----NKLDIAKILIE-SN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQ 130 (134)
Q Consensus 71 t~l~~a~~~-----~~~~~~~~Ll~-~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~ 130 (134)
||+|+|+.. +..+++++|++ .| +++.++..|.|||++|+..++.+++++|.++....+.+
T Consensus 117 tpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~ 183 (186)
T 3t8k_A 117 VVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLK 183 (186)
T ss_dssp CTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCC
T ss_pred hHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhcc
Confidence 666666662 23446666666 56 66666666666666666666666666666554433333
No 78
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=5.1e-29 Score=160.51 Aligned_cols=132 Identities=28% Similarity=0.395 Sum_probs=87.2
Q ss_pred CCccHHHHHHHhCCHHHHHHHHhhC----cccccccCCCChhhHHHhhC---CHHHHHHHHhcCCCCCC--------CCC
Q psy6445 3 VGSSPLHYAAKKNKLDIAKILIESN----RCSLENKMKKTPLHLAAQEG---YVDMCKLLIKHQIDVNA--------QDI 67 (134)
Q Consensus 3 ~g~~~l~~a~~~~~~~~~~~ll~~~----~~~~~~~~~~~~l~~a~~~~---~~~~~~~l~~~~~~~~~--------~~~ 67 (134)
.|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..+ +.+++++|++.|.+++. .+.
T Consensus 198 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~ 277 (373)
T 2fo1_E 198 SERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKY 277 (373)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccc
Confidence 3444444444444444444444443 22344555666666666655 56666666666666654 345
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHhcC--CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 68 VGSSPLHYAAKKNKLDIAKILIESN--RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 68 ~~~t~l~~a~~~~~~~~~~~Ll~~~--~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
.|.||||+|+..++.+++++|++.+ +++..+..|.|||++|+..|+.+++++|+++|++++.+|..|
T Consensus 278 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g 346 (373)
T 2fo1_E 278 KGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATD 346 (373)
T ss_dssp CCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSS
T ss_pred cCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCC
Confidence 6777888888888888888887654 666777778888888888888888888888888887777654
No 79
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.96 E-value=3.7e-29 Score=159.26 Aligned_cols=133 Identities=29% Similarity=0.437 Sum_probs=123.9
Q ss_pred CCCccHHHHHHHhCCHHHHHHHHhhC--cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 2 QVGSSPLHYAAKKNKLDIAKILIESN--RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 2 ~~g~~~l~~a~~~~~~~~~~~ll~~~--~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
+.|.++|+.|++.|+.+.++.++... ..+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||||+|+..
T Consensus 22 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 101 (351)
T 3utm_A 22 EYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSY 101 (351)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred cccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHC
Confidence 35789999999999999999999864 4567888999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
++.+++++|++.| +.+..+..+.|||++|+..++.+++++|+++|++++..+..|
T Consensus 102 g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 157 (351)
T 3utm_A 102 GHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHG 157 (351)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCC
Confidence 9999999999999 888899999999999999999999999999999998877654
No 80
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=1.7e-28 Score=149.08 Aligned_cols=131 Identities=32% Similarity=0.470 Sum_probs=66.5
Q ss_pred CccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCc-
Q psy6445 4 GSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNK- 81 (134)
Q Consensus 4 g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~- 81 (134)
|.||||.|+..|+.+++++|++.+ +.+..+..|.+|||+|+..|+.+++++|++.|.+++..+..|.||+++|+..++
T Consensus 76 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~ 155 (240)
T 3eu9_A 76 NSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHS 155 (240)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCS
T ss_pred CCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCh
Confidence 344444444444444444444443 223333444444444444444444444444444444444444444444443332
Q ss_pred HHHHHHHHhcC-CCCCCCC-CCCChhhHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 82 LDIAKILIESN-RCSLENK-MKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 82 ~~~~~~Ll~~~-~~~~~~~-~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
.+++++|++.+ +.+..+. .+.|||++|+..++.+++++|+++|++++.+|..|
T Consensus 156 ~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 210 (240)
T 3eu9_A 156 VDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKG 210 (240)
T ss_dssp STTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTS
T ss_pred HHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 34444444444 3333343 56677777777777777777777777777776554
No 81
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=1.1e-28 Score=158.92 Aligned_cols=134 Identities=23% Similarity=0.328 Sum_probs=123.3
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcC---CCCCCCCCCCCcHHHHH
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQ---IDVNAQDIVGSSPLHYA 76 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~---~~~~~~~~~~~t~l~~a 76 (134)
|..|.||||.|+..|+.+++++|++.| +.+..+..|.||||+|+..|+.+++++|++.+ .+++..+..|.||+|+|
T Consensus 163 d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A 242 (373)
T 2fo1_E 163 DCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIV 242 (373)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHH
T ss_pred CCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHH
Confidence 578999999999999999999999999 55788899999999999999999999999987 78999999999999999
Q ss_pred HHhC---cHHHHHHHHhcC-CCCC--------CCCCCCChhhHHHhhCCHHHHHHHHhcC-CCCCcccccC
Q psy6445 77 AKKN---KLDIAKILIESN-RCSL--------ENKMKKTPLHLAAQEGHVDMCKLLIKHQ-IDVNAQDIEA 134 (134)
Q Consensus 77 ~~~~---~~~~~~~Ll~~~-~~~~--------~~~~~~t~l~~a~~~~~~~~~~~L~~~g-~~~~~~~~~g 134 (134)
+..+ +.+++++|++.| +.+. .+..|.||||+|+..|+.+++++|++.+ ++++.+|..|
T Consensus 243 ~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g 313 (373)
T 2fo1_E 243 AHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDG 313 (373)
T ss_dssp HHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTC
T ss_pred HHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCC
Confidence 9998 899999999998 5554 5668999999999999999999999886 9999988766
No 82
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=1.1e-28 Score=153.40 Aligned_cols=124 Identities=27% Similarity=0.394 Sum_probs=116.5
Q ss_pred CCCCccHHHHHH-----HhCCHHHHHHHHhhCc-ccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q psy6445 1 RQVGSSPLHYAA-----KKNKLDIAKILIESNR-CSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLH 74 (134)
Q Consensus 1 ~~~g~~~l~~a~-----~~~~~~~~~~ll~~~~-~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~ 74 (134)
|..|.||||.|+ ..++.+++++|++.+. ....+..|.||||+|+..|+.+++++|++.|++++.++..|.||||
T Consensus 142 ~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh 221 (276)
T 4hbd_A 142 NRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALM 221 (276)
T ss_dssp CTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHH
Confidence 568999999999 7789999999999995 4667788999999999999999999999999999999999999999
Q ss_pred HHHHhCcHHHHHHHHh-cC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcC
Q psy6445 75 YAAKKNKLDIAKILIE-SN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQ 124 (134)
Q Consensus 75 ~a~~~~~~~~~~~Ll~-~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g 124 (134)
+|+..++.+++++|++ .| +++..+..|.|||++|+..|+.+++++|++++
T Consensus 222 ~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 222 CACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 9999999999999999 78 88899999999999999999999999999875
No 83
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.96 E-value=3.8e-28 Score=154.46 Aligned_cols=131 Identities=27% Similarity=0.362 Sum_probs=104.0
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhh-C-cccccccCCCChhhHHHhhCC----HHHHHHHHhcCCCCCCCCCCCCcHHH
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIES-N-RCSLENKMKKTPLHLAAQEGY----VDMCKLLIKHQIDVNAQDIVGSSPLH 74 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~-~-~~~~~~~~~~~~l~~a~~~~~----~~~~~~l~~~~~~~~~~~~~~~t~l~ 74 (134)
++.|.||||.|++.|+.+++++|+++ | +.+..+..|.++++.++..+. .+++++|++.|++++.++..|.||||
T Consensus 165 ~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~ 244 (337)
T 4g8k_A 165 RKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLI 244 (337)
T ss_dssp TTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHH
T ss_pred cCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 35689999999999999999999975 5 456777788888777665443 35777888888888888888888888
Q ss_pred HHHHhCcHHHHHHHHhc-C-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCccc
Q psy6445 75 YAAKKNKLDIAKILIES-N-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQD 131 (134)
Q Consensus 75 ~a~~~~~~~~~~~Ll~~-~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 131 (134)
+|+..++.+++++|++. + +++.++..|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 245 ~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~ 303 (337)
T 4g8k_A 245 LAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 303 (337)
T ss_dssp HHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTCC
T ss_pred HHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 88888888888888765 4 677777888888888888888888888888888877654
No 84
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=4.5e-29 Score=147.09 Aligned_cols=131 Identities=15% Similarity=0.094 Sum_probs=117.5
Q ss_pred CccHHHHHHHhCCHHHHHHHHhhCcccccccCCCChhhHHHhhCCH----HHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 4 GSSPLHYAAKKNKLDIAKILIESNRCSLENKMKKTPLHLAAQEGYV----DMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 4 g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~l~~a~~~~~~----~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
+.++|+.|++.|+.+.++.++..+.....+..|.||||+|+..++. +++++|++.|++++.++..|.||||+|+..
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~ 85 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQG 85 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence 4689999999999999999998875444447899999999999975 599999999999999999999999999999
Q ss_pred Cc------HHHHHHHHhcC-CCCCCCCCCC-ChhhHHHhhC-----CHHHHHHHHh-cCCCCCcccccC
Q psy6445 80 NK------LDIAKILIESN-RCSLENKMKK-TPLHLAAQEG-----HVDMCKLLIK-HQIDVNAQDIEA 134 (134)
Q Consensus 80 ~~------~~~~~~Ll~~~-~~~~~~~~~~-t~l~~a~~~~-----~~~~~~~L~~-~g~~~~~~~~~g 134 (134)
++ .+++++|++.| +++..+..|. ||||+|+..+ ..+++++|++ +|++++.+|..|
T Consensus 86 ~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G 154 (186)
T 3t8k_A 86 GGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWG 154 (186)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTS
T ss_pred CCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCC
Confidence 87 67899999999 8999999999 9999999844 4569999999 999999999876
No 85
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.96 E-value=8.6e-29 Score=145.56 Aligned_cols=110 Identities=24% Similarity=0.263 Sum_probs=102.3
Q ss_pred CCCccHHHHHHHhCCHHHHHHHHhhCcccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHHhC
Q psy6445 2 QVGSSPLHYAAKKNKLDIAKILIESNRCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQD-IVGSSPLHYAAKKN 80 (134)
Q Consensus 2 ~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~-~~~~t~l~~a~~~~ 80 (134)
..|.||||.|+..|+.++++.|++..+.+..+..|.||||+|+..|+.+++++|++.|.+++..+ ..|.||+|+|+..+
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~ 121 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 121 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTTTSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcC
Confidence 36789999999999999999999933668889999999999999999999999999999999888 88999999999999
Q ss_pred cHHHHHHHHhcC-CCCCCCCCCCChhhHHHhh
Q psy6445 81 KLDIAKILIESN-RCSLENKMKKTPLHLAAQE 111 (134)
Q Consensus 81 ~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~ 111 (134)
+.+++++|+++| +++..+..|.|||++|+..
T Consensus 122 ~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 122 RPEVVEALVELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred cHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHh
Confidence 999999999999 8889999999999998775
No 86
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.96 E-value=6.8e-29 Score=151.89 Aligned_cols=123 Identities=23% Similarity=0.265 Sum_probs=113.3
Q ss_pred CCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHHhC
Q psy6445 3 VGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQD-IVGSSPLHYAAKKN 80 (134)
Q Consensus 3 ~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~-~~~~t~l~~a~~~~ 80 (134)
.|.||||.|++.|+.++++.|++ + +.+..+..|.||||+|+..|+.+++++|++.|.+++..+ ..|.||||+|+..+
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g 122 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 122 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcC
Confidence 57899999999999999999999 6 668889999999999999999999999999999999888 78999999999999
Q ss_pred cHHHHHHHHhcC-CCCCCCCCCCChhhHHH----------------hhCCHHHHHHHHhcCCC
Q psy6445 81 KLDIAKILIESN-RCSLENKMKKTPLHLAA----------------QEGHVDMCKLLIKHQID 126 (134)
Q Consensus 81 ~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~----------------~~~~~~~~~~L~~~g~~ 126 (134)
+.+++++|+++| +++..+..|.|||++|+ ..|+.+++++|++.+.+
T Consensus 123 ~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 123 RPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 999999999999 88889999999988887 66889999999986443
No 87
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.95 E-value=1.6e-27 Score=158.38 Aligned_cols=127 Identities=22% Similarity=0.248 Sum_probs=113.8
Q ss_pred ccHHHHHHHhCCHHHHHHHHhhCc-cccc------ccCCCChhhHHHh---hCCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q psy6445 5 SSPLHYAAKKNKLDIAKILIESNR-CSLE------NKMKKTPLHLAAQ---EGYVDMCKLLIKHQIDVNAQDIVGSSPLH 74 (134)
Q Consensus 5 ~~~l~~a~~~~~~~~~~~ll~~~~-~~~~------~~~~~~~l~~a~~---~~~~~~~~~l~~~~~~~~~~~~~~~t~l~ 74 (134)
.+.||.|+..|+.+.++.|++.|. .+.. +..|.||||+|+. .|+.+++++|++.|++++.+|..|.||||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh 212 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHH
Confidence 357999999999999999999993 3444 7889999999966 99999999999999999999999999999
Q ss_pred HHHHhCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCccc
Q psy6445 75 YAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQD 131 (134)
Q Consensus 75 ~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 131 (134)
+|+..|+.+++++|+++| +++..+..|.|||++|+..++.+++++|+++|++++...
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~ 270 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFP 270 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC------
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCc
Confidence 999999999999999999 899999999999999999999999999999999987643
No 88
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.95 E-value=9.3e-27 Score=144.82 Aligned_cols=124 Identities=20% Similarity=0.235 Sum_probs=114.7
Q ss_pred ccHHHHHHHhCCHHHHHHHHhhCcc-------cccccCCCChhhHHHhh---CCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q psy6445 5 SSPLHYAAKKNKLDIAKILIESNRC-------SLENKMKKTPLHLAAQE---GYVDMCKLLIKHQIDVNAQDIVGSSPLH 74 (134)
Q Consensus 5 ~~~l~~a~~~~~~~~~~~ll~~~~~-------~~~~~~~~~~l~~a~~~---~~~~~~~~l~~~~~~~~~~~~~~~t~l~ 74 (134)
.++|+.|+..++.+.++.+++.+.. ...+..|.||||+|+.. ++.+++++|++.|++++.++..|.||||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh 210 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHH
Confidence 4689999999999999999998832 23367899999999999 8999999999999999999999999999
Q ss_pred HHHHhCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCC
Q psy6445 75 YAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVN 128 (134)
Q Consensus 75 ~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~ 128 (134)
+|+..++.+++++|+++| +++..+..|.|||++|+..++.+++++|+++|++..
T Consensus 211 ~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRF 265 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 999999999999999999 899999999999999999999999999999988643
No 89
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.95 E-value=4.4e-27 Score=147.73 Aligned_cols=124 Identities=22% Similarity=0.254 Sum_probs=114.6
Q ss_pred CccHHHHHHHhCCHHHHHHHHhhCc-ccc------cccCCCChhhHHHhh---CCHHHHHHHHhcCCCCCCCCCCCCcHH
Q psy6445 4 GSSPLHYAAKKNKLDIAKILIESNR-CSL------ENKMKKTPLHLAAQE---GYVDMCKLLIKHQIDVNAQDIVGSSPL 73 (134)
Q Consensus 4 g~~~l~~a~~~~~~~~~~~ll~~~~-~~~------~~~~~~~~l~~a~~~---~~~~~~~~l~~~~~~~~~~~~~~~t~l 73 (134)
+.++|+.|+..|+.+.++.|++.+. .+. .+..|.||||+|+.. ++.+++++|+++|++++.++..|.|||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 3467999999999999999999884 343 578899999999997 899999999999999999999999999
Q ss_pred HHHHHhCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCC
Q psy6445 74 HYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDV 127 (134)
Q Consensus 74 ~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~ 127 (134)
|+|+..++.+++++|+++| +++..+..|.|||++|+..++.+++++|+++|++.
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~ 285 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGT 285 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence 9999999999999999999 88899999999999999999999999999988653
No 90
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.95 E-value=1.4e-26 Score=122.33 Aligned_cols=90 Identities=43% Similarity=0.751 Sum_probs=48.2
Q ss_pred CCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCH
Q psy6445 36 KKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHV 114 (134)
Q Consensus 36 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~ 114 (134)
|.||||+|+..|+.+++++|++.|.+++.++..|.||+|+|+..++.+++++|++.| +++..+..|.|||++|+..++.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 445555555555555555555555555555555555555555555555555555555 4445555555555555555555
Q ss_pred HHHHHHHhcCC
Q psy6445 115 DMCKLLIKHQI 125 (134)
Q Consensus 115 ~~~~~L~~~g~ 125 (134)
+++++|+++|+
T Consensus 82 ~~~~~Ll~~ga 92 (93)
T 1n0q_A 82 EVVKLLLEAGA 92 (93)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 55555555554
No 91
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.95 E-value=7.6e-27 Score=149.86 Aligned_cols=123 Identities=20% Similarity=0.300 Sum_probs=114.6
Q ss_pred CccHHHHHHHh-CCHHHHHHHHhhC-cccccc--cCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 4 GSSPLHYAAKK-NKLDIAKILIESN-RCSLEN--KMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 4 g~~~l~~a~~~-~~~~~~~~ll~~~-~~~~~~--~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
+.++||.|+.. ++.++++.|++.| +.+..+ ..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~ 278 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL 278 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 45799999999 9999999999999 456666 7899999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCC
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQID 126 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~ 126 (134)
++.+++++|+++| +++..+..|.|||++|+..++.+++++|+..+..
T Consensus 279 g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 279 GHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred CcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 9999999999999 8899999999999999999999999999987643
No 92
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.95 E-value=1.7e-26 Score=129.99 Aligned_cols=104 Identities=31% Similarity=0.473 Sum_probs=100.0
Q ss_pred ccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhcC-CCCCCCCCCCChhhHHH
Q psy6445 31 LENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAA 109 (134)
Q Consensus 31 ~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~ 109 (134)
.++..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+..++.+++++|++.+ +.+..+..+.||||+|+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999 88889999999999999
Q ss_pred hhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 110 QEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 110 ~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
..++.+++++|+++|++++.+|..|
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~~~~~~g 109 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRNAVNIFG 109 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCC
Confidence 9999999999999999999998876
No 93
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.94 E-value=3e-26 Score=121.04 Aligned_cols=90 Identities=41% Similarity=0.737 Sum_probs=85.1
Q ss_pred CCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCc
Q psy6445 3 VGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNK 81 (134)
Q Consensus 3 ~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~ 81 (134)
+|.||||.|+..|+.+++++|++.+ +.+.++..|.||||+|+..|+.+++++|++.|.+++.++..|.||+|+|+..++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 5899999999999999999999999 568889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcC
Q psy6445 82 LDIAKILIESN 92 (134)
Q Consensus 82 ~~~~~~Ll~~~ 92 (134)
.+++++|++.|
T Consensus 81 ~~~~~~Ll~~g 91 (93)
T 1n0q_A 81 LEVVKLLLEAG 91 (93)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 99999999887
No 94
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.94 E-value=8.5e-26 Score=143.64 Aligned_cols=129 Identities=24% Similarity=0.301 Sum_probs=120.0
Q ss_pred CCccHHHHHHHhCCHHHHHHHHhhC-cccccc-cCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhC
Q psy6445 3 VGSSPLHYAAKKNKLDIAKILIESN-RCSLEN-KMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKN 80 (134)
Q Consensus 3 ~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~-~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~ 80 (134)
+|.|||+.|++.|++++|++|+++| +++..+ ..|.||||+|+..|+.+++++|+++|++++..+..+.++++.+...+
T Consensus 24 ~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 103 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAG 103 (337)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcc
Confidence 3679999999999999999999999 455554 56999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCccc
Q psy6445 81 KLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQD 131 (134)
Q Consensus 81 ~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 131 (134)
...+...++..+ +.+..+..|.||+++|+..++.+++++|+++|++++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~ 155 (337)
T 4g8k_A 104 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRR 155 (337)
T ss_dssp CHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred cchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhh
Confidence 999999999988 888999999999999999999999999999999988654
No 95
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.94 E-value=1.5e-26 Score=126.62 Aligned_cols=103 Identities=38% Similarity=0.524 Sum_probs=70.5
Q ss_pred cccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHh
Q psy6445 32 ENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQ 110 (134)
Q Consensus 32 ~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~ 110 (134)
++..|.||||+|+..|+.+++++|++.+.+++..+..|.||||+|+..++.+++++|++.+ +.+..+..+.|||++|+.
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 4566667777777777777777777666666666666677777777777777777777666 566666667777777777
Q ss_pred hCCHHHHHHHHhcCCCCCcccccC
Q psy6445 111 EGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 111 ~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
.++.+++++|+++|++++.++..|
T Consensus 85 ~~~~~~~~~Ll~~ga~~n~~~~~~ 108 (115)
T 2l6b_A 85 NGHHEIVKLLDAKGADVNARSWGS 108 (115)
T ss_dssp TTCHHHHHHHHTTSSSHHHHSCCC
T ss_pred CCCHHHHHHHHHcCCCCCcCCccc
Confidence 777777777777777766665543
No 96
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.94 E-value=1e-25 Score=124.68 Aligned_cols=102 Identities=30% Similarity=0.380 Sum_probs=95.6
Q ss_pred ccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhh
Q psy6445 33 NKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQE 111 (134)
Q Consensus 33 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~ 111 (134)
+..|.+|||.|+..|+.+++++|++.+.+++..+..|.||||+|+..++.+++++|++.+ +++..+..|.||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 456789999999999999999999999999999999999999999999999999999999 8888999999999999999
Q ss_pred CCHHHHHHHHhcCCCCCcccccC
Q psy6445 112 GHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 112 ~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
++.+++++|+++|++++.+|.+|
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~~~g 106 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKGPDG 106 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCHHHHHHHHHcCCCCCCcCCCC
Confidence 99999999999999999998776
No 97
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.94 E-value=2.2e-26 Score=125.96 Aligned_cols=105 Identities=31% Similarity=0.430 Sum_probs=96.5
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
|++|.||||.|+..++.+++++|++.+ +.+..+..|.||||+|+..++.+++++|++.|.+++..+..|.||+++|+..
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~ 85 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKN 85 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHC
Confidence 688999999999999999999999999 5577889999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcC-CCCCCCCCCCChh
Q psy6445 80 NKLDIAKILIESN-RCSLENKMKKTPL 105 (134)
Q Consensus 80 ~~~~~~~~Ll~~~-~~~~~~~~~~t~l 105 (134)
++.+++++|+++| +++..+..+.+|-
T Consensus 86 ~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 86 GHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred CCHHHHHHHHHcCCCCCcCCccccccc
Confidence 9999999999999 7877887777763
No 98
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=5e-26 Score=127.91 Aligned_cols=106 Identities=21% Similarity=0.270 Sum_probs=100.2
Q ss_pred cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhcC-CCCCCCCC-CCChh
Q psy6445 28 RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKM-KKTPL 105 (134)
Q Consensus 28 ~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~-~~t~l 105 (134)
+.+..+..|.||||+|+..|+.+++++|++.|.+++.++..|.||||+|+. ++.+++++|++.+ +++..+.. |.|||
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L 82 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPV 82 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHH
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHH
Confidence 346678899999999999999999999999999999999999999999999 9999999999999 88888998 99999
Q ss_pred hHHHhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 106 HLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 106 ~~a~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
|+|+..++.+++++|+++|++++.+|..|
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g 111 (136)
T 1d9s_A 83 HDAAREGFLDTLVVLHRAGARLDVCDAWG 111 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTCCCCCCCSSSS
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCC
Confidence 99999999999999999999999988765
No 99
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=7.3e-25 Score=123.16 Aligned_cols=102 Identities=35% Similarity=0.492 Sum_probs=96.3
Q ss_pred ccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhh
Q psy6445 33 NKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQE 111 (134)
Q Consensus 33 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~ 111 (134)
...+.+|||.|+..|+.+++++|++.|.+++..+..|.||||+|+..++.+++++|++.+ +++..+..|.||||+|+..
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 456789999999999999999999999999999999999999999999999999999999 8888999999999999999
Q ss_pred CCHHHHHHHHhcCCCCCcccccC
Q psy6445 112 GHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 112 ~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
++.+++++|+++|++++.+|..|
T Consensus 91 ~~~~~v~~Ll~~g~~~~~~~~~g 113 (136)
T 2jab_A 91 GHLEIAEVLLKHGADVNAQDKFG 113 (136)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCHHHHHHHHHcCCCCcCcCCCC
Confidence 99999999999999999988765
No 100
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=2.6e-24 Score=119.09 Aligned_cols=100 Identities=44% Similarity=0.735 Sum_probs=95.6
Q ss_pred CCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhcC-CCCCCCCCCCChhhHHHhhCC
Q psy6445 35 MKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGH 113 (134)
Q Consensus 35 ~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~~~~~ 113 (134)
+|.||||.|+..|+.+++++|++.+.+++..+..|.||+|+|+..++.+++++|++.+ ++...+..+.|||++|+..++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 4889999999999999999999999999999999999999999999999999999999 888899999999999999999
Q ss_pred HHHHHHHHhcCCCCCcccccC
Q psy6445 114 VDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 114 ~~~~~~L~~~g~~~~~~~~~g 134 (134)
.+++++|+++|++++.+|..|
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g 101 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNG 101 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHHHHHHHcCCCCcccCCCC
Confidence 999999999999999888765
No 101
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=3.7e-25 Score=138.98 Aligned_cols=109 Identities=24% Similarity=0.238 Sum_probs=94.1
Q ss_pred CCCCccHHHHHHHh---CCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q psy6445 1 RQVGSSPLHYAAKK---NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYA 76 (134)
Q Consensus 1 ~~~g~~~l~~a~~~---~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a 76 (134)
|..|.||||+|+.. ++.+++++|++.| +.+..+..|.||||+|+..|+.+++++|++.|++++..|..|.|||++|
T Consensus 187 ~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A 266 (301)
T 2b0o_E 187 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIA 266 (301)
T ss_dssp CSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHH
T ss_pred CCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 45789999999997 8999999999999 5678899999999999999999999999999999999999999999999
Q ss_pred HHhCcHHHHHHHHhcCCCCCCCCCCCChhhHHHhhCCH
Q psy6445 77 AKKNKLDIAKILIESNRCSLENKMKKTPLHLAAQEGHV 114 (134)
Q Consensus 77 ~~~~~~~~~~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~ 114 (134)
+..++.+++++|++.+.. .+.|||++|+..|+.
T Consensus 267 ~~~~~~~iv~~Ll~~ga~-----~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 267 RKKHHKECEELLEQAQAG-----TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHTCHHHHHHHHHHHHH-----TTSSCCC--------
T ss_pred HHcCCHHHHHHHHHhcCC-----CCCChhHHHHhcCCc
Confidence 999999999999998832 478999999987753
No 102
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.92 E-value=9.3e-25 Score=132.47 Aligned_cols=112 Identities=21% Similarity=0.216 Sum_probs=95.6
Q ss_pred HHHHHhhCc-c---cccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhcC-CC
Q psy6445 20 AKILIESNR-C---SLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN-RC 94 (134)
Q Consensus 20 ~~~ll~~~~-~---~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~ 94 (134)
++.|++.+. + ...+..+.++||.|+..|+.+++++|++.|.+++..+..|.||||+|+..++.+++++|++.| ++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 456777773 3 234456678899999999999999999999999999999999999999999999999999999 88
Q ss_pred CCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCccc
Q psy6445 95 SLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQD 131 (134)
Q Consensus 95 ~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 131 (134)
+..+..|.|||++|+..|+.+++++|++.|++++.++
T Consensus 81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~ 117 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117 (229)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc
Confidence 8999999999999999999999999999999999875
No 103
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=2.9e-24 Score=129.55 Aligned_cols=103 Identities=29% Similarity=0.455 Sum_probs=97.7
Q ss_pred cccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhc-C-CCCCCCCCCCChhhHHH
Q psy6445 32 ENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIES-N-RCSLENKMKKTPLHLAA 109 (134)
Q Consensus 32 ~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~-~~~~~~~~~~t~l~~a~ 109 (134)
.+..|.||||+|+..|+.+++++|++.|.+++.++..|.||||+|+..++.+++++|++. + +.+..+..|.||||+|+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 355788999999999999999999999999999999999999999999999999999998 7 88889999999999999
Q ss_pred hhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 110 QEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 110 ~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
..|+.+++++|+++|++++.+|.+|
T Consensus 149 ~~~~~~~v~~Ll~~ga~~~~~~~~g 173 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGARTDLRNIEK 173 (222)
T ss_dssp HHTCHHHHHHHHHHTCCSCCCCTTS
T ss_pred HcCCHHHHHHHHHcCCCCccccCCC
Confidence 9999999999999999999998876
No 104
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=2.1e-24 Score=123.87 Aligned_cols=103 Identities=21% Similarity=0.267 Sum_probs=95.6
Q ss_pred ccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhcC-CCCCCCCCCCC-hhhHH
Q psy6445 31 LENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKT-PLHLA 108 (134)
Q Consensus 31 ~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~t-~l~~a 108 (134)
..+..|.+|||+|+..|+.+++++|++.|.+++..+..|.||||+|+ .++.+++++|++.| +++..+..+.| |||+|
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A 85 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDA 85 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 45678899999999999999999999999999999999999999995 99999999999999 88899999999 99999
Q ss_pred HhhCCHHHHHHHHhcCCCCCcccccC
Q psy6445 109 AQEGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 109 ~~~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
+..++.+++++|+++|++++.+|..|
T Consensus 86 ~~~~~~~~v~~Ll~~ga~~~~~d~~g 111 (156)
T 1bi7_B 86 AREGFLDTLVVLHRAGARLDVRDAWG 111 (156)
T ss_dssp HHHTCHHHHHHHHHHTCCSSCCCTTC
T ss_pred HHCCCHHHHHHHHHcCCCCcccCCCC
Confidence 99999999999999999999998765
No 105
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.92 E-value=1.2e-26 Score=149.32 Aligned_cols=121 Identities=16% Similarity=0.076 Sum_probs=94.5
Q ss_pred CCccHHHHHHHhCCHHHHHHHHhhCcc----cccccCCCChhhHHHhhCCHHHHHHHHhcCCCC---CCCCCCCCcHHHH
Q psy6445 3 VGSSPLHYAAKKNKLDIAKILIESNRC----SLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDV---NAQDIVGSSPLHY 75 (134)
Q Consensus 3 ~g~~~l~~a~~~~~~~~~~~ll~~~~~----~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~---~~~~~~~~t~l~~ 75 (134)
++.||||.|++.|+.+++++|++.+.. ...+..+.+|||+|+..|+.+++++|++.|+++ +..+.. .||||+
T Consensus 91 ~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~ 169 (376)
T 2aja_A 91 KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRL 169 (376)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHH
T ss_pred CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHH
Confidence 456899999999999999999988752 133456678999999999999999999998642 222222 789999
Q ss_pred HHHhCcHHHHHHHHhcC-CCCC--CCCCCCChhhHHH-hhCCHHHHHHHHhcC
Q psy6445 76 AAKKNKLDIAKILIESN-RCSL--ENKMKKTPLHLAA-QEGHVDMCKLLIKHQ 124 (134)
Q Consensus 76 a~~~~~~~~~~~Ll~~~-~~~~--~~~~~~t~l~~a~-~~~~~~~~~~L~~~g 124 (134)
|+..|+.+++++|+++| +... .+..|.|||++|+ ..|+.+++++|++.|
T Consensus 170 Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g 222 (376)
T 2aja_A 170 AAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP 222 (376)
T ss_dssp HHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH
T ss_pred HHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCC
Confidence 99999999999999988 5554 6677889999999 999999999988765
No 106
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=2e-24 Score=126.87 Aligned_cols=101 Identities=22% Similarity=0.248 Sum_probs=95.4
Q ss_pred ccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhcC-CCCCCC-CCCCChhhHHHh
Q psy6445 33 NKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN-RCSLEN-KMKKTPLHLAAQ 110 (134)
Q Consensus 33 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~-~~~~t~l~~a~~ 110 (134)
+..|.||||.|+..|+.+++++|++ +.+++..+..|.||||+|+..++.+++++|++.| +++..+ ..|.||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 4578899999999999999999999 9999999999999999999999999999999999 777777 889999999999
Q ss_pred hCCHHHHHHHHhcCCCCCcccccC
Q psy6445 111 EGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 111 ~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
.++.+++++|+++|++++.+|.+|
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~d~~g 143 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVEDERG 143 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTS
T ss_pred cCcHHHHHHHHHcCCCCcCCCCCC
Confidence 999999999999999999998776
No 107
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.91 E-value=3e-27 Score=152.16 Aligned_cols=122 Identities=13% Similarity=0.147 Sum_probs=107.3
Q ss_pred CCccHHHHHHHhCCHHHHHHHHhhCc----ccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCC--CCCCCCcHHHHH
Q psy6445 3 VGSSPLHYAAKKNKLDIAKILIESNR----CSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNA--QDIVGSSPLHYA 76 (134)
Q Consensus 3 ~g~~~l~~a~~~~~~~~~~~ll~~~~----~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~~~~~t~l~~a 76 (134)
.|.||||+|+..|+.++|++|+++++ .+..+.+ .||||+|+..|+.+++++|++.|.+++. .+..|.||||+|
T Consensus 127 ~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~A 205 (376)
T 2aja_A 127 ENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWA 205 (376)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHH
Confidence 46789999999999999999999994 2333334 8999999999999999999999998876 777899999999
Q ss_pred H-HhCcHHHHHHHHhcCCCCCCCCCCCChhhHHHhhCCHHHHHHHHhcCCCCCccc
Q psy6445 77 A-KKNKLDIAKILIESNRCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQD 131 (134)
Q Consensus 77 ~-~~~~~~~~~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 131 (134)
+ ..|+.+++++|++.|. .+.||+++|+..|+.+++++|++.|++++.++
T Consensus 206 a~~~G~~eiv~~Ll~~ga------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~ 255 (376)
T 2aja_A 206 AVGRGHHNVINFLLDCPV------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMH 255 (376)
T ss_dssp HSTTCCHHHHHHHTTSHH------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHhCCC------ccchHHHHHHHCCCHHHHHHHHhcCccccccc
Confidence 9 9999999999998663 27899999999999999999999988775543
No 108
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.91 E-value=1.2e-24 Score=138.14 Aligned_cols=116 Identities=21% Similarity=0.220 Sum_probs=102.5
Q ss_pred HHHHHHhCCHHHHHHHHhhC-cccc-cccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCc---H
Q psy6445 8 LHYAAKKNKLDIAKILIESN-RCSL-ENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNK---L 82 (134)
Q Consensus 8 l~~a~~~~~~~~~~~ll~~~-~~~~-~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~---~ 82 (134)
.|.|+..+..++++.|++.+ +.+. .+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++ .
T Consensus 101 ~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~ 180 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDS 180 (327)
T ss_dssp ---CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHT
T ss_pred hHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccH
Confidence 47777777788889999888 5576 79999999999999999999999999999999999999999999999998 6
Q ss_pred HHHHHHHhcC--CCCCCCCCCCChhhHHHh----hCCHHHHHHHHhc
Q psy6445 83 DIAKILIESN--RCSLENKMKKTPLHLAAQ----EGHVDMCKLLIKH 123 (134)
Q Consensus 83 ~~~~~Ll~~~--~~~~~~~~~~t~l~~a~~----~~~~~~~~~L~~~ 123 (134)
++++.|++.+ +.+..+..|.||||+|+. .++.+++++|++.
T Consensus 181 ~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~ 227 (327)
T 1sw6_A 181 GTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDI 227 (327)
T ss_dssp TCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred HHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHH
Confidence 7777777765 577889999999999999 8999999999987
No 109
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=6.8e-24 Score=129.76 Aligned_cols=101 Identities=22% Similarity=0.248 Sum_probs=95.1
Q ss_pred ccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhcC-CCCCCC-CCCCChhhHHHh
Q psy6445 33 NKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN-RCSLEN-KMKKTPLHLAAQ 110 (134)
Q Consensus 33 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~-~~~~t~l~~a~~ 110 (134)
+..|.||||.|+..|+.+++++|++ +.+++.++..|.||||+|+..++.+++++|+++| +++..+ ..|.||||+|+.
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 4578899999999999999999999 9999999999999999999999999999999999 777777 789999999999
Q ss_pred hCCHHHHHHHHhcCCCCCcccccC
Q psy6445 111 EGHVDMCKLLIKHQIDVNAQDIEA 134 (134)
Q Consensus 111 ~~~~~~~~~L~~~g~~~~~~~~~g 134 (134)
.++.+++++|+++|++++.+|..|
T Consensus 121 ~g~~~~v~~Ll~~ga~~~~~d~~g 144 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIEVEDERG 144 (244)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCC
Confidence 999999999999999999998776
No 110
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.90 E-value=4.9e-23 Score=111.82 Aligned_cols=90 Identities=30% Similarity=0.483 Sum_probs=60.6
Q ss_pred ccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHhcC-CCCCCCCCCCChhhHHH
Q psy6445 31 LENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAA 109 (134)
Q Consensus 31 ~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~t~l~~a~ 109 (134)
..+.+|.++||+|+..|+.+++++|++.|.+++.++..|.||||+|+..++.+++++|++.| +.+..+..|.|||++|+
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 98 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISI 98 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHH
Confidence 34556666777777777777777777777666666666777777777777777777777666 66666666777777777
Q ss_pred hhCCHHHHHHH
Q psy6445 110 QEGHVDMCKLL 120 (134)
Q Consensus 110 ~~~~~~~~~~L 120 (134)
..++.+++++|
T Consensus 99 ~~~~~~~~~~L 109 (110)
T 2zgd_A 99 DNGNEDLAEIL 109 (110)
T ss_dssp HHTCHHHHHHH
T ss_pred HcCCHHHHHHh
Confidence 77777766655
No 111
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=9.4e-23 Score=126.82 Aligned_cols=93 Identities=18% Similarity=0.329 Sum_probs=88.4
Q ss_pred CCCCccHHHHHHHh---CCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q psy6445 1 RQVGSSPLHYAAKK---NKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYA 76 (134)
Q Consensus 1 ~~~g~~~l~~a~~~---~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a 76 (134)
|..|.||||.|+.. ++.+++++|++.| +.+..+..|.||||+|+..|+.+++++|++.|++++.++..|.||+|+|
T Consensus 166 ~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A 245 (278)
T 1dcq_A 166 HEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIA 245 (278)
T ss_dssp SSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred ccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHH
Confidence 46799999999999 8999999999999 5688899999999999999999999999999999999999999999999
Q ss_pred HHhCcHHHHHHHHhcCC
Q psy6445 77 AKKNKLDIAKILIESNR 93 (134)
Q Consensus 77 ~~~~~~~~~~~Ll~~~~ 93 (134)
+..++.+++++|++++.
T Consensus 246 ~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 246 KRLKHEHCEELLTQALS 262 (278)
T ss_dssp HHTTCHHHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHcCC
Confidence 99999999999999883
No 112
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.89 E-value=2.2e-22 Score=133.85 Aligned_cols=96 Identities=24% Similarity=0.271 Sum_probs=88.0
Q ss_pred CCCCccHHHHHHH---hCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q psy6445 1 RQVGSSPLHYAAK---KNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYA 76 (134)
Q Consensus 1 ~~~g~~~l~~a~~---~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a 76 (134)
|..|.||||+||. .|+.+++++|++.| +.+..|..|.||||+|+..|+.+++++|++.|++++..|..|.||+|+|
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 247 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIA 247 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHH
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 4679999999977 89999999999999 5688899999999999999999999999999999999999999999999
Q ss_pred HHhCcHHHHHHHHhcC-CCCC
Q psy6445 77 AKKNKLDIAKILIESN-RCSL 96 (134)
Q Consensus 77 ~~~~~~~~~~~Ll~~~-~~~~ 96 (134)
+..++.+++++|+++| +...
T Consensus 248 ~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 248 RKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp HHTTCHHHHHHHHHTCC----
T ss_pred HHcCCHHHHHHHHHhCCCCCC
Confidence 9999999999999999 5544
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.88 E-value=3.1e-22 Score=108.65 Aligned_cols=88 Identities=32% Similarity=0.437 Sum_probs=83.1
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHh
Q psy6445 1 RQVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKK 79 (134)
Q Consensus 1 ~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 79 (134)
|.+|.||||.|+..|+.+++++|++.+ +.+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+++|+..
T Consensus 21 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 100 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDN 100 (110)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHc
Confidence 568999999999999999999999998 5577889999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHH
Q psy6445 80 NKLDIAKIL 88 (134)
Q Consensus 80 ~~~~~~~~L 88 (134)
++.+++++|
T Consensus 101 ~~~~~~~~L 109 (110)
T 2zgd_A 101 GNEDLAEIL 109 (110)
T ss_dssp TCHHHHHHH
T ss_pred CCHHHHHHh
Confidence 999999987
No 114
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.88 E-value=4e-22 Score=128.04 Aligned_cols=127 Identities=23% Similarity=0.288 Sum_probs=87.1
Q ss_pred CCCccHHHHHHHhCCHHHHHHHHhhC-cccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHhC
Q psy6445 2 QVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKN 80 (134)
Q Consensus 2 ~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~ 80 (134)
..|.||||+|+..|+.+++++|++++ +.+..+..|.||||+|+..|+.+++++|++.|++++..+..|.||+++|+..+
T Consensus 233 ~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g 312 (368)
T 3jue_A 233 QDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETA 312 (368)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCC
Confidence 68999999999999999999999999 56888999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhcC----CCCCCCCCCCChhhHHHhhCC--HHHHHHHHhcCCCCC
Q psy6445 81 KLDIAKILIESN----RCSLENKMKKTPLHLAAQEGH--VDMCKLLIKHQIDVN 128 (134)
Q Consensus 81 ~~~~~~~Ll~~~----~~~~~~~~~~t~l~~a~~~~~--~~~~~~L~~~g~~~~ 128 (134)
+.+++++|+..+ .....+..+.|+++++..... .+-.+.|...+.+++
T Consensus 313 ~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~~~~~~~~ekl~r~~~~~~ 366 (368)
T 3jue_A 313 NADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFSLMASDDPEKLSRRSHDLH 366 (368)
T ss_dssp CHHHHHHHHHHHC-----------------------------------------
T ss_pred CHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHHhhcCCCHHHHHhcCCCcC
Confidence 999999998765 223445567788887655432 234455555555443
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=83.00 E-value=1.2 Score=18.61 Aligned_cols=19 Identities=21% Similarity=0.247 Sum_probs=14.3
Q ss_pred HHHHHHHhCCHHHHHHHHh
Q psy6445 7 PLHYAAKKNKLDIAKILIE 25 (134)
Q Consensus 7 ~l~~a~~~~~~~~~~~ll~ 25 (134)
.+..||+.|+++.++.|-.
T Consensus 16 qiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHH
Confidence 3567888888888887744
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=49.13 E-value=58 Score=21.95 Aligned_cols=47 Identities=23% Similarity=0.239 Sum_probs=27.2
Q ss_pred HhhCCHHHHHHHHhcCCCCCCC--------------CCCCCcHHHHHHHhCcHHHHHHHHh
Q psy6445 44 AQEGYVDMCKLLIKHQIDVNAQ--------------DIVGSSPLHYAAKKNKLDIAKILIE 90 (134)
Q Consensus 44 ~~~~~~~~~~~l~~~~~~~~~~--------------~~~~~t~l~~a~~~~~~~~~~~Ll~ 90 (134)
+..|+...|+..+..|.++..+ -..|.|.+|.|++..+.+++..|+.
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 3455555555555555444321 1236677777777777777766664
No 117
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=38.58 E-value=17 Score=19.75 Aligned_cols=32 Identities=16% Similarity=0.335 Sum_probs=19.1
Q ss_pred CCCCCCCCCCcHHHHHHHhCcHHHHHHHHhcC
Q psy6445 61 DVNAQDIVGSSPLHYAAKKNKLDIAKILIESN 92 (134)
Q Consensus 61 ~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 92 (134)
.+..+|....-++..|+..++.++++=|++..
T Consensus 27 ~L~KkDkLykDAietAa~S~d~elaEeLL~yF 58 (125)
T 3qil_A 27 ELAKKDSLYKDAMQYASESKDTELAEELLQWF 58 (125)
T ss_dssp CCCSCCCCSSHHHHTTTSSCCSHHHHHHHHHH
T ss_pred HHHHhcccHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 33444555556667777777777666665543
No 118
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=36.50 E-value=63 Score=18.73 Aligned_cols=108 Identities=14% Similarity=0.083 Sum_probs=52.7
Q ss_pred ccHHHHHHHhCCHHHHHHHHhhCcccccccCCCChhhHHHhhCCHHHHHHHHhcCCCCCCC-------------------
Q psy6445 5 SSPLHYAAKKNKLDIAKILIESNRCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQ------------------- 65 (134)
Q Consensus 5 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~------------------- 65 (134)
.+=|..|++.|+++....+.+..+... .-...=..|...|+.++++...+.-.+....
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~~l~~~~---~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kla~i 85 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAKKLNDSI---TWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQNI 85 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHCCHH---HHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHhCCHH---HHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHH
Confidence 445778888888887776655432100 0001113345555555555555543332210
Q ss_pred ---CCCCCcHHHHHHHhCcHH-HHHHHHhcCCCCCCCCCCCChhhHHHhhCCHHHHHHHHh
Q psy6445 66 ---DIVGSSPLHYAAKKNKLD-IAKILIESNRCSLENKMKKTPLHLAAQEGHVDMCKLLIK 122 (134)
Q Consensus 66 ---~~~~~t~l~~a~~~~~~~-~~~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~ 122 (134)
.......++.+...|+++ +++.|.+.+. ..-+...|..+|..+..+-+++
T Consensus 86 A~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r-------~~eA~~~A~t~g~~~~a~~~~~ 139 (177)
T 3mkq_B 86 AQTREDFGSMLLNTFYNNSTKERSSIFAEGGS-------LPLAYAVAKANGDEAAASAFLE 139 (177)
T ss_dssp HHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTC-------HHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHCccHHHHHHHHHHcCCHHHHHHHHHHCCC-------hHHHHHHHHHcCcHHHHHHHHH
Confidence 001113445555555544 4455543331 1234445666788887777763
No 119
>2vxg_A LD41624, GE-1, CG6181-PA, isoform A; decapping, EDC4, hedls, mRNA decay, P-BODY, gene regulation; 1.9A {Drosophila melanogaster}
Probab=24.43 E-value=88 Score=17.31 Aligned_cols=25 Identities=16% Similarity=0.292 Sum_probs=21.6
Q ss_pred cHHHHHHHhCCHHHHHHHHhhCccc
Q psy6445 6 SPLHYAAKKNKLDIAKILIESNRCS 30 (134)
Q Consensus 6 ~~l~~a~~~~~~~~~~~ll~~~~~~ 30 (134)
.+++.|...++.+++.+++.+.++.
T Consensus 18 eAf~~aL~ssd~~lv~~lc~~~dp~ 42 (139)
T 2vxg_A 18 KAFHQALLANDLGLVEFTLRHTDSN 42 (139)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHSCHH
T ss_pred HHHHHHHHhCcHHHHHHHHHcCCHH
Confidence 5788999999999999999988653
Done!