RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6445
(134 letters)
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 95.8 bits (237), Expect = 1e-25
Identities = 32/137 (23%), Positives = 57/137 (41%), Gaps = 8/137 (5%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESNRCSLENK------MKKTPLHLAAQEGYVDMCKLLIK 57
G++ L AA+K +++ KIL++ + L + + LL+
Sbjct: 148 GATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLD 207
Query: 58 HQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESNRCSLE--NKMKKTPLHLAAQEGHVD 115
H DVN + G +PL A +K L + + L+E + + KT L LA +
Sbjct: 208 HGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKK 267
Query: 116 MCKLLIKHQIDVNAQDI 132
+ +LL K + D+
Sbjct: 268 IAELLCKRGASTDCGDL 284
Score = 63.1 bits (152), Expect = 2e-13
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESNRCSLE--NKMKKTPLHLAAQEGYVDMCKLLIKHQID 61
G +PL A +K L + + L+E + + KT L LA + + +LL K
Sbjct: 219 GKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS 278
Query: 62 VNAQDIV 68
+ D+V
Sbjct: 279 TDCGDLV 285
Score = 59.2 bits (142), Expect = 5e-12
Identities = 41/175 (23%), Positives = 60/175 (34%), Gaps = 47/175 (26%)
Query: 4 GSSPLHYAAKKNKLDIAKILIES--NRCSLENKMKKTPLHLAAQEGYVDMCKLLI----- 56
+ L A + +D+ + L+E N E + TPLH A Q D+ +LL+
Sbjct: 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD 64
Query: 57 ----------------------------KHQIDVNAQDIVGSSPLHYAAKKNKLDIAKIL 88
DVN D G + AA K+ K L
Sbjct: 65 PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFL 124
Query: 89 IES-----------NRCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQ-IDVNAQD 131
+ K T L AA++GHV++ K+L+ DVNA D
Sbjct: 125 YKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACD 179
Score = 58.4 bits (140), Expect = 9e-12
Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 27 NRCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQ-IDVNAQDIVGSSPLHYAAKKNK---- 81
K T L AA++G+V++ K+L+ DVNA D +G + L +A +
Sbjct: 139 EDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDV 198
Query: 82 LDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQ-IDVNAQDIE 133
I +L++ ++ + KTPL LA ++ H+ + + L++ + I++N D +
Sbjct: 199 EAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSD 252
Score = 46.5 bits (109), Expect = 1e-07
Identities = 33/180 (18%), Positives = 56/180 (31%), Gaps = 50/180 (27%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESNRCS--------------------------------- 30
G +PLH A + ++ DI ++L+
Sbjct: 39 GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV 98
Query: 31 -LENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIV----------GSSPLHYAAKK 79
+ T AA G V K L K +VN + G++ L AA+K
Sbjct: 99 NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 158
Query: 80 NKLDIAKILIESNRCSLENK------MKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIE 133
+++ KIL++ + L + + LL+ H DVN +
Sbjct: 159 GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGER 218
Score = 38.4 bits (88), Expect = 9e-05
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 103 TPLHLAAQEGHVDMCKLLIKHQIDVNAQDIE 133
L A Q VD+ + L++ +VN Q+ E
Sbjct: 7 HLLIKAVQNEDVDLVQQLLEGGANVNFQEEE 37
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 91.6 bits (226), Expect = 2e-23
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 35/160 (21%)
Query: 7 PLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQ 65
PLH A+ L I K L++ ++ N +TPLH+AA+ G+ ++ K L++++ VNA+
Sbjct: 3 PLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAK 62
Query: 66 DIVGSSPLHYAAKKNKLDIAKILIESN--------------------------------- 92
+PLH AA+ ++ K+L+E+N
Sbjct: 63 AKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKE 122
Query: 93 -RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQD 131
+ K TPLH+AA+ G V + +LL++ NA
Sbjct: 123 ASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAG 162
Score = 89.6 bits (221), Expect = 8e-23
Identities = 31/92 (33%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 38 TPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN-RCSL 96
TPLH+A+ G++ + K L++ N ++ +PLH AA+ ++AK L+++ + +
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61
Query: 97 ENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVN 128
+ K +TPLH AA+ GH +M KLL+++ + N
Sbjct: 62 KAKDDQTPLHCAARIGHTNMVKLLLENNANPN 93
Score = 85.4 bits (210), Expect = 3e-21
Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESNRC-SLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDV 62
G +PLH AA++ ++ +L+ +L NK TPLHL AQEG+V + +LIKH + V
Sbjct: 231 GVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMV 290
Query: 63 NAQDIVGSSPLHYAAKKNKLDIAKILIESNRC-SLENKMKKTPLHLAAQEGHVDMCKLLI 121
+A +G +PLH A+ + + K L++ + + K+ +PLH AAQ+GH D+ LL+
Sbjct: 291 DATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLL 350
Query: 122 KHQIDVNAQDIE 133
K+ N +
Sbjct: 351 KNGASPNEVSSD 362
Score = 80.4 bits (197), Expect = 2e-19
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 35/165 (21%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDV 62
+PLH AA+ ++AK L+++ + + + K +TPLH AA+ G+ +M KLL+++ +
Sbjct: 33 VETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANP 92
Query: 63 ---------------------------------NAQDIVGSSPLHYAAKKNKLDIAKILI 89
G +PLH AAK K+ +A++L+
Sbjct: 93 NLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLL 152
Query: 90 ESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIE 133
E + + K TPLH+A ++D+ KLL+ ++
Sbjct: 153 ERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWN 197
Score = 78.9 bits (193), Expect = 8e-19
Identities = 41/133 (30%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDV 62
G +PLH A++ + +A +LI+ +M TPLH+A+ G + + K L++HQ DV
Sbjct: 264 GLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADV 323
Query: 63 NAQDIVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLL- 120
NA+ +G SPLH AA++ DI +L+++ + + TPL +A + G++ + +L
Sbjct: 324 NAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLK 383
Query: 121 --IKHQIDVNAQD 131
V D
Sbjct: 384 VVTDETSFVLVSD 396
Score = 76.2 bits (186), Expect = 6e-18
Identities = 48/129 (37%), Positives = 74/129 (57%), Gaps = 2/129 (1%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDV 62
G +PLH A N LDI K+L+ TPLH+AA++ V++ + L+++
Sbjct: 165 GLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSA 224
Query: 63 NAQDIVGSSPLHYAAKKNKLDIAKILIESNRC-SLENKMKKTPLHLAAQEGHVDMCKLLI 121
NA+ + G +PLH AA++ ++ +L+ +L NK TPLHL AQEGHV + +LI
Sbjct: 225 NAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLI 284
Query: 122 KHQIDVNAQ 130
KH + V+A
Sbjct: 285 KHGVMVDAT 293
Score = 75.4 bits (184), Expect = 1e-17
Identities = 48/132 (36%), Positives = 77/132 (58%), Gaps = 2/132 (1%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDV 62
G +PLH AAK K+ +A++L+E + + K TPLH+A +D+ KLL+
Sbjct: 132 GFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSP 191
Query: 63 NAQDIVGSSPLHYAAKKNKLDIAKILIESNRCS-LENKMKKTPLHLAAQEGHVDMCKLLI 121
++ G +PLH AAK+N++++A+ L++ + E+ TPLHLAAQEGH +M LL+
Sbjct: 192 HSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLL 251
Query: 122 KHQIDVNAQDIE 133
Q + N +
Sbjct: 252 SKQANGNLGNKS 263
Score = 65.8 bits (159), Expect = 3e-14
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 35/164 (21%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESN----------------------------------RC 29
+PLH AA+ ++ K+L+E+N
Sbjct: 66 DQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQ 125
Query: 30 SLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILI 89
+ K TPLH+AA+ G V + +LL++ NA G +PLH A N LDI K+L+
Sbjct: 126 ACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLL 185
Query: 90 ESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDI 132
TPLH+AA++ V++ + L+++ NA+ +
Sbjct: 186 PRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESV 229
Score = 63.1 bits (152), Expect = 2e-13
Identities = 49/130 (37%), Positives = 81/130 (62%), Gaps = 2/130 (1%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESNRCS-LENKMKKTPLHLAAQEGYVDMCKLLIKHQIDV 62
G +PLH AAK+N++++A+ L++ + E+ TPLHLAAQEG+ +M LL+ Q +
Sbjct: 198 GYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANG 257
Query: 63 NAQDIVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLI 121
N + G +PLH A++ + +A +LI+ +M TPLH+A+ G++ + K L+
Sbjct: 258 NLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLL 317
Query: 122 KHQIDVNAQD 131
+HQ DVNA+
Sbjct: 318 QHQADVNAKT 327
Score = 43.8 bits (102), Expect = 1e-06
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 103 TPLHLAAQEGHVDMCKLLIKHQIDVNAQDIE 133
TPLH+A+ GH+ + K L++ N +++
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVK 32
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 70.0 bits (170), Expect = 3e-16
Identities = 41/121 (33%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDV 62
G +PLHYAA KN+ +IA +L+E ++ + T +H AA +G + M +L+ ++
Sbjct: 103 GCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKAST 162
Query: 63 NAQDIVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLI 121
N QD G++PLH A + +++ AK+L+ +ENK +KTPL +A G + K ++
Sbjct: 163 NIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAK-GGLGLILKRMV 221
Query: 122 K 122
+
Sbjct: 222 E 222
Score = 66.1 bits (160), Expect = 8e-15
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 33 NKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN 92
N+ TPLH AA + ++ +L++ + +A+D ++ +H AA K L + IL+
Sbjct: 100 NQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYK 159
Query: 93 RC-SLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIE 133
++++ TPLHLA E V+ KLL+ + ++ E
Sbjct: 160 ASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKE 201
Score = 58.8 bits (141), Expect = 4e-12
Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 8 LHYAAKKNKLDIAKILIESNRCSLENKMK--KTPLHLAAQEGYVDMCKLLIKHQIDVNAQ 65
+ A KL+ K I +++ + +T LH A G+ ++ + L++ + VN +
Sbjct: 7 VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66
Query: 66 DIVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQ 124
D G SPLH AA + +I K L+ + + N+ TPLH AA + ++ +L++
Sbjct: 67 DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 126
Query: 125 IDVNAQD 131
+ +A+D
Sbjct: 127 ANPDAKD 133
Score = 56.1 bits (134), Expect = 4e-11
Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 2/132 (1%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESNRCSLE-NKMKKTPLHLAAQEGYVDMCKLLIKHQIDV 62
+ LH+A +I + L++ + + +PLH+AA G ++ K L+ V
Sbjct: 37 SRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQV 96
Query: 63 NAQDIVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLI 121
NA + G +PLHYAA KN+ +IA +L+E ++ + T +H AA +G++ M +L+
Sbjct: 97 NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILL 156
Query: 122 KHQIDVNAQDIE 133
++ N QD E
Sbjct: 157 YYKASTNIQDTE 168
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 68.0 bits (165), Expect = 4e-15
Identities = 25/148 (16%), Positives = 46/148 (31%), Gaps = 18/148 (12%)
Query: 5 SSPLHYAAKKNKLDIAKILI----ESNRCSLE--------NKMKKTPLHLAAQEGY---V 49
+ + KN + ++L NR + + + +AA G +
Sbjct: 47 AIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSAL 106
Query: 50 DMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIE---SNRCSLENKMKKTPLH 106
D LL+ V AA+ L + L E + ++
Sbjct: 107 DTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFR 166
Query: 107 LAAQEGHVDMCKLLIKHQIDVNAQDIEA 134
LAA+ GH+ + L + I+A
Sbjct: 167 LAAENGHLHVLNRLCELAPTEATAMIQA 194
Score = 64.9 bits (157), Expect = 5e-14
Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 10/141 (7%)
Query: 4 GSSPLHYAAKKNKLDIAKILIE--SNRCSLE--NKMKKTPLHLAAQEGYVDMCKLLIKHQ 59
AA L ++ ++ LAA+ G++ + L +
Sbjct: 90 SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELA 149
Query: 60 IDVNAQDI--VGSSPLHYAAKKNKLDIAKILIES----NRCSLENKMKKTPLHLAAQEGH 113
I AA+ L + L E ++ + A GH
Sbjct: 150 PTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGH 209
Query: 114 VDMCKLLIKHQIDVNAQDIEA 134
++ L+ + + +I
Sbjct: 210 HNVINFLLDCPVMLAYAEIHE 230
Score = 56.8 bits (136), Expect = 4e-11
Identities = 16/123 (13%), Positives = 30/123 (24%), Gaps = 15/123 (12%)
Query: 7 PLHYAAKKNKLDIAKILIESNRCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQD 66
+ + + + + E L+ +G D+ Q
Sbjct: 226 AEIHEFEYGEKYVNPFIARHVNRLKEMH---DAFKLSNPDGVFDL------VTKSECLQG 276
Query: 67 IVGSSPLHYAAKKNKLDIAKILIESNRCSLE------NKMKKTPLHLAAQEGHVDMCKLL 120
L + LD + L+ L LA + G+ C LL
Sbjct: 277 FYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALL 336
Query: 121 IKH 123
+
Sbjct: 337 LSI 339
Score = 54.9 bits (131), Expect = 2e-10
Identities = 21/144 (14%), Positives = 39/144 (27%), Gaps = 17/144 (11%)
Query: 6 SPLHYAAKKNKLDIAKILIESNRCSLENKMKK--TPLHLAAQEGYVDMCKLLIKHQIDVN 63
L ++ + I +N SL K + L + + +LL + N
Sbjct: 14 PQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYN 73
Query: 64 A-----------QDIVGSSPLHYAAKKNKLDIAKILIE--SNRCSLE--NKMKKTPLHLA 108
+ I AA L ++ ++ LA
Sbjct: 74 RNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLA 133
Query: 109 AQEGHVDMCKLLIKHQIDVNAQDI 132
A+ GH+ + L + I
Sbjct: 134 AENGHLHVLNRLCELAPTEIMAMI 157
Score = 54.5 bits (130), Expect = 3e-10
Identities = 15/127 (11%), Positives = 35/127 (27%), Gaps = 12/127 (9%)
Query: 4 GSSPLHYAAKKNKLDIAKILIE---SNRCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQI 60
AA+ L + L E + ++ LAA+ G++ + L +
Sbjct: 126 NYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAP 185
Query: 61 DVN---AQDIVGSSPLHYAAKKNKLDIAKILIESNRCSLENKMKKTPLHLAAQEGHVDMC 117
Q + A + ++ L++ + G +
Sbjct: 186 TEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM------LAYAEIHEFEYGEKYVN 239
Query: 118 KLLIKHQ 124
+ +H
Sbjct: 240 PFIARHV 246
Score = 53.4 bits (127), Expect = 6e-10
Identities = 16/155 (10%), Positives = 34/155 (21%), Gaps = 21/155 (13%)
Query: 1 RQVGSSPLHYAAKKNKLDIAKILIES----NRCSLENKMKKTPLHLAAQEGYVDMCKLLI 56
+ AA+ L + L E ++ + A G+ ++ L+
Sbjct: 158 QAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLL 217
Query: 57 KHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESNRC-----------------SLENK 99
+ + +I L E + L+
Sbjct: 218 DCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGF 277
Query: 100 MKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134
L E +D + L+
Sbjct: 278 YMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTAT 312
Score = 26.8 bits (58), Expect = 1.0
Identities = 3/22 (13%), Positives = 7/22 (31%)
Query: 4 GSSPLHYAAKKNKLDIAKILIE 25
+ L A + +L+
Sbjct: 317 ANELLRLALRLGNQGACALLLS 338
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 67.1 bits (162), Expect = 6e-15
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 4 GSSPLHYAAKKNKLDIAKI--LIESNRCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQID 61
G + LHYAA+ + + I K + + +++ KTP+ LAAQEG +++ LI+
Sbjct: 187 GRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS 246
Query: 62 VNAQDIVGSSPLHYAAKKNKLDIAKILIE 90
V A D + A N +I I
Sbjct: 247 VEAVDATDHTARQLAQANNHHNIVDIFDR 275
Score = 57.1 bits (136), Expect = 2e-11
Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Query: 32 ENKMKKTPLHLAAQEGYVDMCKLLIKHQ-IDVNAQDIVGSSPLHYAAKKNKLDIAKILIE 90
E +T LH AAQ + + K L+ + + + QD G +P+ AA++ ++++ LI+
Sbjct: 183 EKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQ 242
Query: 91 SN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQ 124
+ T LA H ++ + + +
Sbjct: 243 QGASVEAVDATDHTARQLAQANNHHNIVDIFDRCR 277
Score = 52.0 bits (123), Expect = 1e-09
Identities = 21/128 (16%), Positives = 43/128 (33%), Gaps = 10/128 (7%)
Query: 6 SPLH-YAAKKNKLDIAKILIESNRCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQI---- 60
SP+ + I + + + ++ + +T LH A + + LI H+
Sbjct: 2 SPIKLHTEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECI 61
Query: 61 ----DVNAQDIVGSSPLHYAAKKNKLDIAKILIESNRCSLENKMKKTPLHLAAQE-GHVD 115
DVNA D ++PL A + + L+++ + A
Sbjct: 62 AAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFG 121
Query: 116 MCKLLIKH 123
M ++
Sbjct: 122 MMVYMLNS 129
Score = 50.9 bits (120), Expect = 5e-09
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 51 MCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKI--LIESNRCSLENKMKKTPLHLA 108
K+ +++ G + LHYAA+ + + I K + + +++ KTP+ LA
Sbjct: 169 GAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLA 228
Query: 109 AQEGHVDMCKLLIKHQIDVNAQDIE 133
AQEG +++ LI+ V A D
Sbjct: 229 AQEGRIEVVMYLIQQGASVEAVDAT 253
Score = 45.9 bits (107), Expect = 2e-07
Identities = 13/91 (14%), Positives = 33/91 (36%), Gaps = 11/91 (12%)
Query: 37 KTPLHLAAQ-EGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESNRCS 95
++P+ L + G + + + + +++ + LH+ A + + ++ LI
Sbjct: 1 ESPIKLHTEAAGSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEAKE 59
Query: 96 L---------ENKMKKTPLHLAAQEGHVDMC 117
+ + TPL LA +
Sbjct: 60 CIAAGADVNAMDCDENTPLMLAVLARRRRLV 90
Score = 45.1 bits (105), Expect = 4e-07
Identities = 10/57 (17%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 71 SPLH-YAAKKNKLDIAKILIESNRCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQID 126
SP+ + I + + + ++ + +T LH A + + LI H+
Sbjct: 2 SPIKLHTEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAK 58
Score = 26.6 bits (57), Expect = 1.1
Identities = 3/28 (10%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Query: 102 KTPLHLAAQ-EGHVDMCKLLIKHQIDVN 128
++P+ L + G + + + + +++
Sbjct: 1 ESPIKLHTEAAGSYAITEPITRESVNII 28
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 62.8 bits (151), Expect = 3e-13
Identities = 26/183 (14%), Positives = 55/183 (30%), Gaps = 55/183 (30%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESN------------------------------------ 27
G++PLH+ L++ K L++
Sbjct: 107 GNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYL 166
Query: 28 --RCSLENKMKKTPLHLAAQEGY-------------VDMCKLLIKHQIDVNAQDIVGSSP 72
LE+ M +T LH + M ++ K + + S
Sbjct: 167 YPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESK 226
Query: 73 LHYAAKKNKLDIAKILIESNRCSL----ENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVN 128
+ + K I + L + ++ T L++AA+ G++ + L+ + D
Sbjct: 227 PNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPF 286
Query: 129 AQD 131
+
Sbjct: 287 IAN 289
Score = 57.8 bits (138), Expect = 2e-11
Identities = 14/78 (17%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESNRCSL----ENKMKKTPLHLAAQEGYVDMCKLLIKHQ 59
S + + K I + L + ++ T L++AA+ G + + L+ +
Sbjct: 223 KESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYG 282
Query: 60 IDVNAQDIVGSSPLHYAA 77
D + G P+ + A
Sbjct: 283 ADPFIANKSGLRPVDFGA 300
Score = 54.3 bits (129), Expect = 3e-10
Identities = 24/115 (20%), Positives = 39/115 (33%), Gaps = 7/115 (6%)
Query: 2 QVGSSPLHYAAKKNKLDIAKILIESNRCSLENKM---KKTPLHLAAQEGYVDMCKLLIKH 58
AA K LDI I + K++ + E + + L
Sbjct: 186 ITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLK 245
Query: 59 ---QIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAA 109
+NAQD G + L+ AA+ + I L++ + NK P+ A
Sbjct: 246 WIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300
Score = 51.6 bits (122), Expect = 3e-09
Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 5/101 (4%)
Query: 37 KTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIES----- 91
TPLH +++ K L+KH + D +G S L A K +
Sbjct: 108 NTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLY 167
Query: 92 NRCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDI 132
LE+ M +T LH + C K+ +D+ I
Sbjct: 168 PCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWI 208
Score = 44.3 bits (103), Expect = 9e-07
Identities = 20/121 (16%), Positives = 44/121 (36%), Gaps = 4/121 (3%)
Query: 1 RQVGSSPLHYAAKKNKLDIAKILIE--SNRCSLENKMKKTPLHLAAQEGYVDMCKLLIKH 58
+ + L ++ L SNR S + H++ ++
Sbjct: 36 KMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNT 95
Query: 59 QIDVNAQ-DIVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDM 116
Q+++N D G++PLH+ L++ K L++ + M ++ L A + +
Sbjct: 96 QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYD 155
Query: 117 C 117
Sbjct: 156 S 156
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 59.7 bits (143), Expect = 2e-12
Identities = 23/149 (15%), Positives = 45/149 (30%), Gaps = 19/149 (12%)
Query: 4 GSSPLHYAAKKNKLDIAKILIES----NRCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQ 59
G + LH A L+ L+N + +T LHLAA G + L
Sbjct: 9 GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAG 68
Query: 60 IDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN---------------RCSLENKMKKTP 104
V + G + LH A + A +L++ + +
Sbjct: 69 AGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPA 128
Query: 105 LHLAAQEGHVDMCKLLIKHQIDVNAQDIE 133
+ + ++ + A++ +
Sbjct: 129 AVDSQPNPENEEEPRDEDWRLQLEAENYD 157
Score = 55.1 bits (131), Expect = 1e-10
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 35 MKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIE 90
+TPLHLA + + +LL+K D A+ G +PL A + +A++L
Sbjct: 191 CGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRA 246
Score = 46.2 bits (108), Expect = 1e-07
Identities = 20/127 (15%), Positives = 42/127 (33%), Gaps = 4/127 (3%)
Query: 1 RQVGSSPLHYAAKKNKLDIAKILIESNRCSLENKMKK---TPLHLAAQEGYVDMCKLLIK 57
+P ++ N + + E R LE + + + L
Sbjct: 121 PDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDA 180
Query: 58 HQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDM 116
+ G +PLH A + + ++L+++ + +TPL A + +
Sbjct: 181 GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPIL 240
Query: 117 CKLLIKH 123
+LL H
Sbjct: 241 ARLLRAH 247
Score = 42.0 bits (97), Expect = 5e-06
Identities = 22/140 (15%), Positives = 49/140 (35%), Gaps = 17/140 (12%)
Query: 9 HYAAKKNKLDIAKILIESN---------------RCSLENKMKKTPLHLAAQEGYVDMCK 53
H A + A +L++ + + + +
Sbjct: 83 HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEP 142
Query: 54 LLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESNRCSLE--NKMKKTPLHLAAQE 111
++ + A++ G +PLH A ++ ++L ++ + +TPLHLA +
Sbjct: 143 RDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEA 202
Query: 112 GHVDMCKLLIKHQIDVNAQD 131
+ +LL+K D A+
Sbjct: 203 QAASVLELLLKAGADPTARM 222
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 60.1 bits (144), Expect = 2e-12
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 32 ENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIES 91
K T LH+AA +GY ++ KLLI+ + DVN +D G +PLH AA K + +IL+E+
Sbjct: 195 HAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVEN 254
Query: 92 N-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQI 125
NK+ +T +A ++ + +L K +
Sbjct: 255 LCDMEAVNKVGQTAFDVADEDILGYLEELQKKQNL 289
Score = 59.0 bits (141), Expect = 5e-12
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDV 62
G + LH AA K ++ K+LI++ ++++ TPLH AA G + C++L+++ D+
Sbjct: 199 GGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDM 258
Query: 63 NAQDIVGSSPLHYAAKKNKLDIAKILIESN 92
A + VG + A + + ++ + N
Sbjct: 259 EAVNKVGQTAFDVADEDILGYLEELQKKQN 288
Score = 52.8 bits (125), Expect = 8e-10
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 27 NRCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAK 86
N + + + + D + L I+ G + LH AA K ++ K
Sbjct: 157 NEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLK 216
Query: 87 ILIESN-RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQD 131
+LI++ ++++ TPLH AA G + C++L+++ D+ A +
Sbjct: 217 LLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVN 262
Score = 46.6 bits (109), Expect = 1e-07
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 10/136 (7%)
Query: 8 LHYAAKKNKLDIAKILI-ESNRCSLENKMKK--------TPLHLAAQEGYVDMCKLLIKH 58
+ A +K + + + E++ K KK A G + L++
Sbjct: 3 MADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLER 62
Query: 59 QIDVNAQDIVGSSPLHYAAKKNKLDIAKILIES-NRCSLENKMKKTPLHLAAQEGHVDMC 117
D+N ++ G + LH A + +D+ K L+E+ + + PLH AA G++D+
Sbjct: 63 GADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIA 122
Query: 118 KLLIKHQIDVNAQDIE 133
+ LI V A + E
Sbjct: 123 EYLISQGAHVGAVNSE 138
Score = 40.9 bits (94), Expect = 2e-05
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQI 60
G +PLH AA K + +IL+E+ NK+ +T +A ++ + +L K +
Sbjct: 232 GWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQKKQNL 289
Score = 35.1 bits (79), Expect = 0.001
Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDV 62
+ A + L+E + N T LH A + VDM K L+++ ++
Sbjct: 40 DGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANI 99
Query: 63 NAQDIVGSSPLHYAAKKNKLDIAKILIESNR-CSLENKMKKTPLHLAAQEGHVDMCK 118
N D G PLH AA LDIA+ LI N TPL +A +E ++ +
Sbjct: 100 NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQ 156
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 57.9 bits (138), Expect = 9e-12
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 7 PLHYAAKKNKLDIAKILIESNRCSLENKMK-KTPLHLAAQEGYVDMCKLLIKHQIDVNAQ 65
PL +A + N L + ++L++ + LH A+ G + + + L++ D + +
Sbjct: 147 PLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLK 206
Query: 66 DIVGSSPLHYAAKKNKLDIAK 86
+ +PL A + +DI +
Sbjct: 207 NCHNDTPLMVARSRRVIDILR 227
Score = 53.3 bits (126), Expect = 4e-10
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 22 ILIESNRCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNK 81
+ ++ +++ K ++PL A + + M +LL++H +VNAQ GSS LH A+ +
Sbjct: 130 LERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGL 189
Query: 82 LDIAKILIESN-RCSLENKMKKTPLHLAAQEGHVDMCK 118
L + + L+ S SL+N TPL +A +D+ +
Sbjct: 190 LPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 48.3 bits (113), Expect = 3e-08
Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Query: 37 KTPLHLAAQEGYVDMCKLLIK----HQIDVNAQDIVGSSPLHYAAKKN-KLDIAKILIES 91
TPLH+A +G + L+ +++ + + +PLH A + ++
Sbjct: 4 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAG 63
Query: 92 NRCSLENKMKKTPLHLAAQEGHVDMCKLLIKH 123
++ +T HLA + + L+
Sbjct: 64 ASPMALDRHGQTAAHLACEHRSPTCLRALLDS 95
Score = 42.1 bits (97), Expect = 4e-06
Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 10/133 (7%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESNRCS-----LENKMKKTPLHLAAQEGYVDMCKLLIKH 58
G +PLH A + L L+ + + N +++TPLHLA + +LL+
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 62
Query: 59 QIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESNRCSLENKMK-----KTPLHLAAQEGH 113
A D G + H A + + L++S + T LH+A
Sbjct: 63 GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTEC 122
Query: 114 VDMCKLLIKHQID 126
+ +LL++ D
Sbjct: 123 QETVQLLLERGAD 135
Score = 41.8 bits (96), Expect = 6e-06
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 38 TPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSS-PLHYAAKKNKLDIAKILIESNRCSL 96
T LH+A + +LL++ D++A DI PL +A + N L + ++L++
Sbjct: 112 TALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVN 171
Query: 97 ENKMK-KTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIE 133
+ LH A+ G + + + L++ D + ++
Sbjct: 172 AQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCH 209
Score = 38.7 bits (88), Expect = 7e-05
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Query: 69 GSSPLHYAAKKNKLDIAKILIESNRCS-----LENKMKKTPLHLAAQEGHVDMCKLLIKH 123
G +PLH A + L L+ + + N +++TPLHLA + +LL+
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 62
Query: 124 QIDVN 128
Sbjct: 63 GASPM 67
Score = 37.9 bits (86), Expect = 1e-04
Identities = 7/34 (20%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Query: 102 KTPLHLAAQEGHVDMCKLLIK----HQIDVNAQD 131
TPLH+A +G++ L+ +++ +
Sbjct: 4 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYN 37
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 52.9 bits (125), Expect = 6e-10
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 33 NKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN 92
+ KT LH AA + +L+ H + +AQD +PL AA++ + +K L+++
Sbjct: 120 DNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNF 179
Query: 93 -RCSLENKMKKTPLHLAAQEGHVDMCKLL 120
+ + M + P +A++ H D+ +LL
Sbjct: 180 ANREITDHMDRLPRDVASERLHHDIVRLL 208
Score = 51.7 bits (122), Expect = 1e-09
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESNR-CSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDV 62
G + LH+AA N + IL+ + ++ +TPL LAA+EG + K L+ + +
Sbjct: 123 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 182
Query: 63 NAQDIVGSSPLHYAAKKNKLDIAKIL 88
D + P A+++ DI ++L
Sbjct: 183 EITDHMDRLPRDVASERLHHDIVRLL 208
Score = 47.1 bits (110), Expect = 6e-08
Identities = 41/166 (24%), Positives = 64/166 (38%), Gaps = 36/166 (21%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESNRCS--------------------------------- 30
G + LH AA+ + D AK L+++ +
Sbjct: 23 GETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATN 82
Query: 31 --LENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKIL 88
TPL LAA+ M + LI D+NA D G + LH+AA N + IL
Sbjct: 83 LNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNIL 142
Query: 89 IESNR-CSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIE 133
+ + ++ +TPL LAA+EG + K L+ + + D
Sbjct: 143 LMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHM 188
Score = 37.8 bits (86), Expect = 1e-04
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Query: 19 IAKILIES--NRCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYA 76
+ L+ + +K +T LHLAA+ D K L+ D N+QD G +PLH A
Sbjct: 4 VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAA 63
Query: 77 AKKNKLDIAKI--LIESNRCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIE 133
+ + + +I + + TPL LAA+ M + LI D+NA D
Sbjct: 64 VAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 122
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 49.0 bits (115), Expect = 2e-08
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 23 LIESNRCSLENKMKKTPLHLAAQEGYVDMCKLLIKH-QIDVNAQDIVGSSPLHYAAKKNK 81
+ +++K + PLH AA G + + +LL + VN QD G +PL +A +
Sbjct: 125 IENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGH 184
Query: 82 LDIAKILIESNRCSLE--NKMKKTPLHLAAQEGHVDMCKLLIKHQID 126
D A +L+E + + +A E + K + + +D
Sbjct: 185 GDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLNNVVD 228
Score = 48.7 bits (114), Expect = 2e-08
Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Query: 38 TPLHLAAQEGYVDMCK-LLIKHQIDVNAQDIVGSSPLHYAAKKN 80
PLH A E + LL + +D G PLH++
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQ 45
Score = 47.5 bits (111), Expect = 5e-08
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESNRCSL--ENKMKKTPLHLAAQEGYVDMCKLLI-KHQI 60
PLH AA L + ++L + ++ ++K TPL A EG+ D LL+ K+
Sbjct: 138 NQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGA 197
Query: 61 DVNAQDIVGSSPLHYAAKKNKLDIAKILIE 90
+ + D G+ A + + K +
Sbjct: 198 EYDLVDNKGAKAEDVALNE---QVKKFFLN 224
Score = 43.3 bits (100), Expect = 2e-06
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 7 PLHYAAKKNKLDIAKILIESNRCSLE--NKMKKTPLHLAAQEGYVDMCKLLIKH 58
PLH A +N+ + L+ S L ++ + PLH + ++ L+
Sbjct: 3 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSK 56
Score = 40.6 bits (93), Expect = 1e-05
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 27 NRCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAK 86
+ T LHLA + + ++ + LI++ V +D PLH AA L + +
Sbjct: 96 PDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIE 155
Query: 87 ILIESNRCSL--ENKMKKTPLHLAAQEGHVDMCKLLI-KHQIDVNAQD 131
+L + ++ ++K TPL A EGH D LL+ K+ + + D
Sbjct: 156 LLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVD 203
Score = 36.7 bits (83), Expect = 3e-04
Identities = 8/32 (25%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Query: 103 TPLHLAAQEGHVDMCK-LLIKHQIDVNAQDIE 133
PLH A E + LL + +D +
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQD 33
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 47.3 bits (110), Expect = 2e-08
Identities = 20/120 (16%), Positives = 45/120 (37%), Gaps = 2/120 (1%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESNRCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVN 63
+ L AA + +++ + L+E+ G + +LL+ H + N
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62
Query: 64 AQDIVGSSPLHYAAKKNKLDIAKILIESNRCSLENKMK--KTPLHLAAQEGHVDMCKLLI 121
D + + A + +++ L+ + + P+ LA + GH D+ + L
Sbjct: 63 CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122
Score = 33.0 bits (73), Expect = 0.004
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 103 TPLHLAAQEGHVDMCKLLIKHQIDVNAQ 130
L AA G V+ + L++ + NA
Sbjct: 5 DWLATAAARGRVEEVRALLEAGANPNAP 32
Score = 29.9 bits (65), Expect = 0.045
Identities = 6/23 (26%), Positives = 11/23 (47%)
Query: 4 GSSPLHYAAKKNKLDIAKILIES 26
G P+ A + D+A+ L +
Sbjct: 102 GRLPVDLAEELGHRDVARYLRAA 124
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 47.5 bits (111), Expect = 3e-08
Identities = 32/154 (20%), Positives = 54/154 (35%), Gaps = 34/154 (22%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESNRCSLENK----------------------------- 34
L AA + + + L+ +
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASP 61
Query: 35 -----MKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILI 89
+P+H AA+ G++D K+L++H DVN D G+ P+H A ++ + L
Sbjct: 62 NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA 121
Query: 90 ESNRCSLENKMKKTPLHLAAQEGHVDMCKLLIKH 123
+ + TPL LA Q G D+ +L H
Sbjct: 122 AESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155
Score = 32.9 bits (73), Expect = 0.006
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 38 TPLHLAAQEGYVDMCK-LLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESNRCSL 96
L AA G V + LL + + +A + G + L + ++L + ++
Sbjct: 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNV 63
Query: 97 ENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIE 133
++ +P+H AA+ G +D K+L++H DVN D
Sbjct: 64 QDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGT 100
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 47.3 bits (111), Expect = 3e-08
Identities = 26/135 (19%), Positives = 54/135 (40%), Gaps = 14/135 (10%)
Query: 4 GSSPLHY---AAKKNKLDIAKILIESN-------RCSLENKMKKTPLHLAAQ---EGYVD 50
++ LH A K + + ++ +T LHLA + +
Sbjct: 3 TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLH 62
Query: 51 MCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAA 109
+ L+++ +++ Q GS+ LHY + + K+L+ + N+ +TPL +A
Sbjct: 63 IVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAK 122
Query: 110 QEGHVDMCKLLIKHQ 124
+ H +LL +
Sbjct: 123 RLKHEHCEELLTQAL 137
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 46.4 bits (108), Expect = 1e-07
Identities = 17/54 (31%), Positives = 23/54 (42%)
Query: 37 KTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIE 90
+T LHLA D+ LL+K DVN G SP + I + L +
Sbjct: 146 RTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQ 199
Score = 43.7 bits (101), Expect = 1e-06
Identities = 19/102 (18%), Positives = 38/102 (37%), Gaps = 2/102 (1%)
Query: 35 MKKTPLHLAAQEGYVDMCKLLIKH-QIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN- 92
T LHLA+ GY+ + +LL+ + G + LH A D+ +L++
Sbjct: 110 NGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGA 169
Query: 93 RCSLENKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQDIEA 134
+ +P L + + L + ++ E+
Sbjct: 170 DVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPES 211
Score = 42.6 bits (98), Expect = 3e-06
Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Query: 37 KTPLHLAAQEGYVDMCKLLIKHQI----DVNAQDIVGSSPLHYA 76
+ LHLA + +I+ +N Q+ + +PLH A
Sbjct: 3 DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLA 46
Score = 40.6 bits (93), Expect = 1e-05
Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 4 GSSPLHYAAKKNKLDIAKILIESN-RCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQID 61
G + LH A D+ +L++ + +P L + + L + ++
Sbjct: 145 GRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203
Score = 36.0 bits (81), Expect = 6e-04
Identities = 7/34 (20%), Positives = 13/34 (38%), Gaps = 4/34 (11%)
Query: 102 KTPLHLAAQEGHVDMCKLLIKHQI----DVNAQD 131
+ LHLA + +I+ +N Q+
Sbjct: 3 DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQN 36
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 43.7 bits (101), Expect = 7e-07
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 34/148 (22%)
Query: 7 PLHYAAKKNKLDIAKILIES---------------------------------NRCSLEN 33
L AA+ + D +IL+ +
Sbjct: 5 KLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDART 64
Query: 34 KMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESNR 93
K+ +TPLH+AA EG+ ++ ++L+KH DVNA+D++ + LH+A + N ++ ++LI+
Sbjct: 65 KVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGA 124
Query: 94 C-SLENKMKKTPLHLAAQEGHVDMCKLL 120
++K KT ++ G+ D+ ++L
Sbjct: 125 DVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 37.5 bits (85), Expect = 1e-04
Identities = 6/29 (20%), Positives = 11/29 (37%)
Query: 103 TPLHLAAQEGHVDMCKLLIKHQIDVNAQD 131
L AA+ G D ++L+ +
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFTTDW 32
Score = 35.2 bits (79), Expect = 8e-04
Identities = 6/29 (20%), Positives = 11/29 (37%)
Query: 38 TPLHLAAQEGYVDMCKLLIKHQIDVNAQD 66
L AA+ G D ++L+ +
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFTTDW 32
Score = 29.4 bits (64), Expect = 0.075
Identities = 4/20 (20%), Positives = 8/20 (40%)
Query: 4 GSSPLHYAAKKNKLDIAKIL 23
+ + D+A+IL
Sbjct: 133 CKTAFDISIDNGNEDLAEIL 152
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 43.1 bits (100), Expect = 9e-07
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 6 SPLHYAAKKNKLDIAKILIESNRC-SLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNA 64
+ L ++ + + D+ + +I SL N T LH A G+ ++ K L++ ++VNA
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 65 QDIVGSSPLHYAAKKNKLDIAKILIE--SNRCSLENKMKKTPLHL--AAQEGHVDMCKLL 120
D G +PLH AA N + + K L+E + ++ +T +EG+ + L
Sbjct: 63 ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122
Query: 121 IKHQ 124
Q
Sbjct: 123 YGVQ 126
Score = 32.0 bits (71), Expect = 0.008
Identities = 6/28 (21%), Positives = 12/28 (42%)
Query: 103 TPLHLAAQEGHVDMCKLLIKHQIDVNAQ 130
L ++ EG D+ + +I D +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLP 30
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 42.2 bits (97), Expect = 3e-06
Identities = 33/153 (21%), Positives = 60/153 (39%), Gaps = 35/153 (22%)
Query: 6 SPLHYAAKKNKLDIAKILIESN---------------------------------RCSLE 32
+ L AA + L+ L+++N L+
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62
Query: 33 NKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESN 92
++ +H AA+ G++D + L++ Q DVN +D G+ PLH AAK+ L + + L++
Sbjct: 63 DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122
Query: 93 RC--SLENKMKKTPLHLAAQEGHVDMCKLLIKH 123
N T LA G ++ L+ +
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155
Score = 41.8 bits (96), Expect = 4e-06
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 103 TPLHLAAQEGHVDMCKLLIKHQIDVNAQD 131
L AA G ++ L+++ ++VNAQ+
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQN 31
Score = 41.0 bits (94), Expect = 7e-06
Identities = 25/94 (26%), Positives = 47/94 (50%)
Query: 38 TPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLDIAKILIESNRCSLE 97
L AA G ++ L+++ ++VNAQ+ G + L N ++L+ L+
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62
Query: 98 NKMKKTPLHLAAQEGHVDMCKLLIKHQIDVNAQD 131
++ +H AA+ G +D + L++ Q DVN +D
Sbjct: 63 DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIED 96
Score = 32.2 bits (71), Expect = 0.010
Identities = 2/22 (9%), Positives = 8/22 (36%)
Query: 4 GSSPLHYAAKKNKLDIAKILIE 25
G + A + ++ ++
Sbjct: 133 GDTACDLARLYGRNEVVSLMQA 154
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 36.4 bits (82), Expect = 2e-04
Identities = 18/112 (16%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
Query: 7 PLHYAAKKNKLDIAKILIESNRCSLENKMKKTPLHLAAQEGY-VDMCKLLIKHQIDVNAQ 65
+A K LD K + A + +++ + L+ D+NA
Sbjct: 5 EFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAP 64
Query: 66 DIVGSSPLHYAAKKNKLDIAKILIESNRCS-LENKMKKTPLHLAAQEGHVDM 116
D +PL A + + K+L+ ++ T L + +
Sbjct: 65 DKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQAIKAL 116
Score = 32.2 bits (71), Expect = 0.008
Identities = 5/25 (20%), Positives = 8/25 (32%)
Query: 100 MKKTPLHLAAQEGHVDMCKLLIKHQ 124
M A + G +D K +
Sbjct: 1 MCDKEFMWALKNGDLDEVKDYVAKG 25
Score = 29.9 bits (65), Expect = 0.053
Identities = 5/25 (20%), Positives = 8/25 (32%)
Query: 35 MKKTPLHLAAQEGYVDMCKLLIKHQ 59
M A + G +D K +
Sbjct: 1 MCDKEFMWALKNGDLDEVKDYVAKG 25
Score = 27.6 bits (59), Expect = 0.29
Identities = 6/46 (13%), Positives = 9/46 (19%)
Query: 72 PLHYAAKKNKLDIAKILIESNRCSLENKMKKTPLHLAAQEGHVDMC 117
+A K LD K + A +
Sbjct: 5 EFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEI 50
>d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)
{Escherichia coli, Grx3 [TaxId: 562]}
Length = 82
Score = 23.4 bits (50), Expect = 6.0
Identities = 11/57 (19%), Positives = 21/57 (36%)
Query: 27 NRCSLENKMKKTPLHLAAQEGYVDMCKLLIKHQIDVNAQDIVGSSPLHYAAKKNKLD 83
+ + + + A +E + QI ++AQ I G L+ + LD
Sbjct: 22 SSKGVSFQELPIDGNAAKREEMIKRSGRTTVPQIFIDAQHIGGYDDLYALDARGGLD 78
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.131 0.369
Gapped
Lambda K H
0.267 0.0395 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 455,872
Number of extensions: 18414
Number of successful extensions: 295
Number of sequences better than 10.0: 1
Number of HSP's gapped: 151
Number of HSP's successfully gapped: 114
Length of query: 134
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 58
Effective length of database: 1,364,116
Effective search space: 79118728
Effective search space used: 79118728
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (23.2 bits)