Query psy6446
Match_columns 134
No_of_seqs 279 out of 1031
Neff 12.3
Searched_HMMs 46136
Date Fri Aug 16 18:06:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6446.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6446hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0272|consensus 100.0 1.1E-31 2.4E-36 162.3 8.7 133 1-134 242-376 (459)
2 KOG0315|consensus 100.0 9E-30 2E-34 145.7 14.3 133 1-134 21-155 (311)
3 KOG0271|consensus 100.0 9.2E-30 2E-34 153.0 13.6 133 1-133 138-276 (480)
4 KOG0272|consensus 100.0 2.6E-30 5.7E-35 156.4 9.1 132 2-134 285-419 (459)
5 KOG0263|consensus 100.0 2.9E-29 6.2E-34 160.9 14.0 133 1-134 474-608 (707)
6 KOG0263|consensus 100.0 1.5E-29 3.3E-34 162.2 11.7 132 1-133 516-649 (707)
7 KOG0279|consensus 100.0 3.9E-28 8.5E-33 140.6 15.0 132 1-134 128-263 (315)
8 KOG0279|consensus 100.0 4.2E-28 9.1E-33 140.5 13.7 132 1-133 86-222 (315)
9 KOG0266|consensus 100.0 2.4E-27 5.3E-32 151.4 16.2 134 1-134 182-319 (456)
10 KOG0286|consensus 100.0 7.3E-27 1.6E-31 136.3 15.1 131 1-132 167-302 (343)
11 KOG0266|consensus 100.0 1.2E-26 2.6E-31 148.3 17.3 132 1-133 226-364 (456)
12 PTZ00420 coronin; Provisional 100.0 8.5E-26 1.8E-30 145.9 19.4 133 2-134 56-198 (568)
13 KOG0295|consensus 99.9 1.2E-25 2.7E-30 134.3 14.7 133 1-134 216-365 (406)
14 KOG0271|consensus 99.9 1.2E-26 2.6E-31 139.8 10.4 130 1-131 347-479 (480)
15 KOG0285|consensus 99.9 2E-25 4.4E-30 133.6 13.1 132 1-133 174-307 (460)
16 PTZ00421 coronin; Provisional 99.9 6.3E-24 1.4E-28 136.2 19.4 119 16-134 71-199 (493)
17 PTZ00421 coronin; Provisional 99.9 7.9E-24 1.7E-28 135.8 18.6 133 1-134 99-246 (493)
18 KOG0291|consensus 99.9 1.5E-24 3.3E-29 139.7 15.2 130 2-132 332-507 (893)
19 KOG0278|consensus 99.9 3.7E-26 8.1E-31 131.3 6.9 133 1-134 82-214 (334)
20 KOG0273|consensus 99.9 2.6E-24 5.6E-29 132.4 14.8 132 2-134 341-483 (524)
21 KOG0291|consensus 99.9 3.6E-24 7.9E-29 138.1 15.6 132 2-133 374-550 (893)
22 KOG0315|consensus 99.9 7.3E-24 1.6E-28 121.7 15.0 130 2-133 63-197 (311)
23 KOG0286|consensus 99.9 3.4E-24 7.5E-29 125.3 13.6 130 1-131 210-343 (343)
24 KOG0284|consensus 99.9 1.8E-25 3.8E-30 135.4 7.6 132 1-134 161-295 (464)
25 KOG0276|consensus 99.9 3.8E-24 8.2E-29 135.8 12.2 133 1-134 120-258 (794)
26 KOG0276|consensus 99.9 9.3E-23 2E-27 129.6 15.2 134 1-134 78-216 (794)
27 KOG0319|consensus 99.9 1.9E-23 4.1E-28 134.2 12.1 133 1-134 435-578 (775)
28 KOG0645|consensus 99.9 2.8E-22 6.2E-27 116.2 15.7 132 1-132 38-179 (312)
29 KOG0264|consensus 99.9 6.2E-23 1.3E-27 125.3 13.7 132 2-133 252-404 (422)
30 KOG0319|consensus 99.9 5.2E-23 1.1E-27 132.2 13.8 130 1-131 486-617 (775)
31 KOG0282|consensus 99.9 4.3E-24 9.4E-29 131.5 8.5 124 11-134 205-331 (503)
32 KOG0295|consensus 99.9 7.7E-23 1.7E-27 122.6 13.0 131 1-132 258-405 (406)
33 KOG0302|consensus 99.9 9.6E-23 2.1E-27 122.8 12.7 131 2-133 236-378 (440)
34 KOG0283|consensus 99.9 2.9E-23 6.2E-28 134.4 11.1 115 18-133 265-440 (712)
35 KOG0275|consensus 99.9 1.7E-24 3.7E-29 128.9 5.1 133 2-134 237-379 (508)
36 KOG0269|consensus 99.9 2.1E-23 4.6E-28 134.6 10.4 133 1-133 157-296 (839)
37 KOG0273|consensus 99.9 1.5E-22 3.3E-27 124.7 13.2 132 1-134 382-524 (524)
38 KOG0265|consensus 99.9 1.3E-22 2.8E-27 119.0 12.1 120 14-133 41-163 (338)
39 KOG0284|consensus 99.9 1.3E-23 2.7E-28 127.5 8.1 132 1-133 203-337 (464)
40 KOG0310|consensus 99.9 7.6E-23 1.6E-27 126.1 11.6 131 2-133 92-225 (487)
41 KOG1407|consensus 99.9 4.8E-22 1E-26 114.9 13.7 132 1-133 88-261 (313)
42 KOG0296|consensus 99.9 1.2E-21 2.7E-26 117.5 15.8 132 2-134 88-221 (399)
43 KOG0283|consensus 99.9 4.4E-22 9.6E-27 129.0 14.8 130 1-133 391-532 (712)
44 KOG0264|consensus 99.9 3.8E-22 8.3E-27 121.9 13.6 133 1-133 201-347 (422)
45 PTZ00420 coronin; Provisional 99.9 3.5E-21 7.6E-26 124.8 18.4 131 1-133 98-248 (568)
46 cd00200 WD40 WD40 domain, foun 99.9 2.9E-21 6.3E-26 116.1 17.1 132 1-133 116-249 (289)
47 KOG0282|consensus 99.9 1.4E-22 3E-27 125.0 11.1 132 1-134 281-463 (503)
48 KOG0292|consensus 99.9 1E-22 2.2E-27 133.7 11.0 131 1-133 32-165 (1202)
49 KOG0269|consensus 99.9 5.5E-23 1.2E-27 132.8 9.6 131 2-133 112-250 (839)
50 KOG0281|consensus 99.9 3E-23 6.5E-28 124.4 7.8 127 1-133 258-388 (499)
51 KOG0277|consensus 99.9 2.4E-22 5.3E-27 115.7 11.1 132 1-133 128-265 (311)
52 KOG0294|consensus 99.9 1E-21 2.3E-26 116.0 13.7 132 1-133 64-197 (362)
53 KOG0313|consensus 99.9 2.9E-22 6.4E-27 120.6 11.3 130 1-132 282-417 (423)
54 KOG0285|consensus 99.9 1.5E-22 3.3E-27 121.5 10.1 131 1-132 216-347 (460)
55 KOG0277|consensus 99.9 4.3E-22 9.2E-27 114.8 11.4 132 1-134 84-222 (311)
56 cd00200 WD40 WD40 domain, foun 99.9 1.1E-20 2.4E-25 113.5 18.3 132 1-133 32-165 (289)
57 PLN00181 protein SPA1-RELATED; 99.9 9.1E-21 2E-25 128.5 19.6 131 1-133 599-738 (793)
58 KOG0316|consensus 99.9 1.7E-21 3.8E-26 111.4 13.6 129 2-133 83-213 (307)
59 KOG0292|consensus 99.9 9.1E-22 2E-26 129.4 14.0 133 1-133 116-280 (1202)
60 PLN00181 protein SPA1-RELATED; 99.9 5.2E-21 1.1E-25 129.7 18.1 130 1-133 556-690 (793)
61 KOG0289|consensus 99.9 3.3E-21 7.2E-26 118.0 15.3 128 3-131 328-460 (506)
62 KOG0289|consensus 99.9 1.6E-21 3.4E-26 119.4 13.2 133 1-134 284-420 (506)
63 KOG0268|consensus 99.9 9.9E-23 2.1E-27 122.3 7.6 132 1-133 211-345 (433)
64 KOG0318|consensus 99.9 1.1E-20 2.3E-25 118.1 16.2 120 13-133 183-350 (603)
65 KOG0645|consensus 99.9 1.1E-20 2.5E-25 109.7 15.1 131 2-132 85-224 (312)
66 KOG0265|consensus 99.9 2.5E-21 5.4E-26 113.7 11.9 131 1-133 113-246 (338)
67 KOG1446|consensus 99.9 4.7E-20 1E-24 108.8 17.3 132 1-134 123-263 (311)
68 KOG0278|consensus 99.9 9.1E-21 2E-25 109.4 13.9 129 1-133 166-297 (334)
69 KOG0267|consensus 99.9 8.7E-23 1.9E-27 131.2 5.8 132 1-134 93-227 (825)
70 KOG1446|consensus 99.9 3.3E-20 7.1E-25 109.4 15.4 132 1-134 37-171 (311)
71 KOG0316|consensus 99.9 7.7E-21 1.7E-25 108.8 12.2 121 13-134 10-132 (307)
72 KOG0772|consensus 99.9 2.7E-21 5.9E-26 120.7 10.3 134 1-134 292-446 (641)
73 KOG0647|consensus 99.9 1.1E-20 2.3E-25 111.2 12.2 117 18-134 25-146 (347)
74 KOG0274|consensus 99.9 4.5E-20 9.8E-25 119.2 15.3 128 1-134 272-401 (537)
75 KOG0305|consensus 99.9 5.7E-21 1.2E-25 120.5 10.9 132 1-134 240-377 (484)
76 KOG1407|consensus 99.9 4.3E-20 9.3E-25 106.9 13.2 130 2-133 171-311 (313)
77 KOG0973|consensus 99.9 1.7E-20 3.7E-25 124.6 13.2 121 13-133 62-201 (942)
78 KOG0281|consensus 99.9 1.2E-21 2.6E-26 117.6 7.1 127 1-133 341-477 (499)
79 KOG0639|consensus 99.9 8.1E-22 1.8E-26 123.0 6.3 131 1-132 488-621 (705)
80 KOG0305|consensus 99.9 2.2E-20 4.7E-25 117.9 12.6 131 2-133 282-419 (484)
81 KOG0772|consensus 99.9 8.9E-21 1.9E-25 118.5 10.5 116 18-133 266-394 (641)
82 KOG2110|consensus 99.9 1.1E-19 2.5E-24 109.3 14.8 132 1-133 107-248 (391)
83 KOG1539|consensus 99.9 6.7E-20 1.5E-24 119.6 14.8 130 1-131 471-646 (910)
84 KOG4283|consensus 99.9 3.7E-20 8E-25 109.1 12.2 131 1-133 125-276 (397)
85 KOG0310|consensus 99.9 1.6E-19 3.5E-24 111.7 14.6 128 1-130 177-306 (487)
86 KOG0318|consensus 99.8 1.8E-19 4E-24 112.7 14.8 127 7-134 134-266 (603)
87 KOG0646|consensus 99.8 7.8E-20 1.7E-24 112.6 13.0 133 1-133 104-247 (476)
88 KOG0300|consensus 99.8 8.4E-20 1.8E-24 108.8 12.7 132 1-133 295-428 (481)
89 KOG0308|consensus 99.8 4.3E-20 9.2E-25 117.9 12.1 133 1-133 96-243 (735)
90 KOG0647|consensus 99.8 1.6E-19 3.5E-24 106.4 13.5 129 1-133 51-184 (347)
91 KOG0293|consensus 99.8 2.8E-20 6.1E-25 113.6 9.9 119 15-133 219-342 (519)
92 KOG0275|consensus 99.8 1.3E-20 2.8E-25 112.6 8.0 132 1-133 286-423 (508)
93 KOG0640|consensus 99.8 1.2E-20 2.6E-25 111.8 7.8 133 1-134 195-336 (430)
94 KOG0643|consensus 99.8 4.7E-19 1E-23 103.1 13.5 117 16-133 6-128 (327)
95 KOG0640|consensus 99.8 5E-20 1.1E-24 109.3 9.2 117 18-134 110-247 (430)
96 KOG0306|consensus 99.8 1.7E-19 3.6E-24 116.9 12.2 131 1-132 531-663 (888)
97 KOG1273|consensus 99.8 1E-19 2.3E-24 108.0 10.4 100 14-116 19-118 (405)
98 KOG0274|consensus 99.8 1.2E-18 2.5E-23 112.8 15.5 129 1-134 229-360 (537)
99 KOG0296|consensus 99.8 2.2E-18 4.7E-23 103.7 15.0 119 13-133 57-178 (399)
100 KOG0302|consensus 99.8 3.2E-19 6.8E-24 107.9 11.3 124 10-134 201-333 (440)
101 KOG0288|consensus 99.8 8.3E-19 1.8E-23 107.0 13.0 128 1-130 323-458 (459)
102 KOG0303|consensus 99.8 1.7E-19 3.7E-24 109.6 10.0 116 18-134 80-204 (472)
103 KOG1274|consensus 99.8 1.2E-18 2.5E-23 114.8 14.5 132 2-134 120-263 (933)
104 KOG0306|consensus 99.8 4.8E-19 1E-23 114.9 12.4 130 1-132 88-218 (888)
105 KOG0294|consensus 99.8 9.8E-19 2.1E-23 103.6 12.3 118 13-133 36-157 (362)
106 KOG0270|consensus 99.8 5.1E-18 1.1E-22 104.3 15.3 132 1-133 267-404 (463)
107 KOG0313|consensus 99.8 1.1E-18 2.3E-23 105.5 12.0 133 1-134 170-331 (423)
108 KOG0293|consensus 99.8 1E-18 2.2E-23 107.0 11.7 130 2-133 293-425 (519)
109 KOG0288|consensus 99.8 2E-18 4.3E-23 105.4 11.8 129 1-134 284-418 (459)
110 KOG0300|consensus 99.8 3E-19 6.4E-24 106.5 8.0 133 1-133 171-344 (481)
111 KOG1036|consensus 99.8 7.4E-18 1.6E-22 99.5 13.5 128 1-134 36-164 (323)
112 PF08662 eIF2A: Eukaryotic tra 99.8 2.8E-17 6.1E-22 94.7 15.8 118 11-133 49-179 (194)
113 KOG1445|consensus 99.8 6.1E-19 1.3E-23 113.3 8.8 113 21-134 629-751 (1012)
114 KOG0643|consensus 99.8 4E-18 8.7E-23 99.2 11.3 121 2-122 122-249 (327)
115 KOG0639|consensus 99.8 1.5E-18 3.3E-23 108.6 10.0 132 1-132 532-703 (705)
116 KOG2111|consensus 99.8 6.3E-17 1.4E-21 96.1 16.2 132 2-133 115-256 (346)
117 TIGR03866 PQQ_ABC_repeats PQQ- 99.8 1.7E-16 3.8E-21 96.8 17.2 130 1-133 12-145 (300)
118 KOG0299|consensus 99.8 5.6E-18 1.2E-22 104.5 10.1 131 2-133 226-356 (479)
119 KOG4378|consensus 99.8 2.9E-17 6.3E-22 102.9 13.0 132 3-134 146-281 (673)
120 KOG0308|consensus 99.8 4.2E-17 9.1E-22 104.5 13.9 131 2-133 142-285 (735)
121 KOG0270|consensus 99.8 1.6E-17 3.5E-22 102.1 11.4 109 25-134 248-361 (463)
122 TIGR03866 PQQ_ABC_repeats PQQ- 99.8 4.7E-16 1E-20 94.9 18.0 131 2-134 139-280 (300)
123 KOG1063|consensus 99.8 1.6E-17 3.6E-22 106.9 11.7 132 2-133 554-699 (764)
124 KOG0301|consensus 99.8 5E-17 1.1E-21 104.7 13.8 126 1-133 162-288 (745)
125 KOG0267|consensus 99.8 1.3E-18 2.9E-23 112.4 6.7 129 4-133 54-184 (825)
126 KOG1034|consensus 99.8 7E-17 1.5E-21 96.4 13.4 114 18-133 88-211 (385)
127 KOG2096|consensus 99.8 4.2E-17 9.2E-22 97.3 12.4 132 1-133 210-360 (420)
128 KOG1188|consensus 99.8 2.9E-17 6.4E-22 98.3 11.6 133 1-133 51-196 (376)
129 KOG1332|consensus 99.8 1.6E-17 3.4E-22 95.7 8.7 113 21-133 12-134 (299)
130 KOG0641|consensus 99.7 5.9E-16 1.3E-20 88.9 14.9 132 1-133 205-349 (350)
131 KOG0641|consensus 99.7 4.3E-16 9.3E-21 89.4 14.2 130 2-133 165-303 (350)
132 KOG0973|consensus 99.7 3.1E-17 6.8E-22 109.5 10.3 110 11-122 120-237 (942)
133 KOG1007|consensus 99.7 7.5E-17 1.6E-21 95.0 10.7 131 1-132 194-360 (370)
134 KOG1274|consensus 99.7 2.5E-16 5.5E-21 104.1 14.2 132 1-133 77-218 (933)
135 KOG0303|consensus 99.7 1.7E-16 3.6E-21 96.9 11.9 131 1-133 105-249 (472)
136 KOG2055|consensus 99.7 4.8E-16 1E-20 96.3 13.4 130 2-133 282-417 (514)
137 KOG2055|consensus 99.7 9.7E-17 2.1E-21 99.3 10.3 132 2-133 368-512 (514)
138 KOG0268|consensus 99.7 4.8E-17 1E-21 98.2 8.7 130 2-133 169-302 (433)
139 KOG1009|consensus 99.7 3.8E-17 8.2E-22 99.6 7.8 129 2-130 38-192 (434)
140 KOG1188|consensus 99.7 2E-16 4.3E-21 94.8 10.5 133 1-133 95-242 (376)
141 KOG2048|consensus 99.7 1.5E-15 3.2E-20 97.8 15.0 133 1-133 91-233 (691)
142 KOG0321|consensus 99.7 2.7E-16 5.8E-21 100.7 11.5 134 1-134 123-302 (720)
143 KOG1332|consensus 99.7 1.2E-15 2.7E-20 88.1 12.2 133 1-133 34-193 (299)
144 KOG0301|consensus 99.7 2.1E-16 4.5E-21 101.9 9.3 126 1-133 82-208 (745)
145 KOG0646|consensus 99.7 5.4E-16 1.2E-20 96.0 10.8 131 2-133 63-206 (476)
146 KOG0322|consensus 99.7 3.1E-16 6.8E-21 91.4 9.1 130 2-132 177-322 (323)
147 KOG1273|consensus 99.7 1.9E-15 4.1E-20 90.2 12.4 131 2-134 47-184 (405)
148 KOG2048|consensus 99.7 1.1E-14 2.5E-19 93.8 16.7 132 1-134 48-185 (691)
149 KOG4283|consensus 99.7 1.6E-15 3.6E-20 89.8 11.7 113 19-133 100-219 (397)
150 KOG1036|consensus 99.7 2E-15 4.3E-20 89.4 12.0 113 18-133 11-124 (323)
151 KOG1408|consensus 99.7 5E-16 1.1E-20 101.2 10.3 131 2-133 60-194 (1080)
152 KOG2394|consensus 99.7 3.7E-16 8.1E-21 98.6 9.4 102 11-113 281-383 (636)
153 KOG4378|consensus 99.7 8.6E-16 1.9E-20 96.4 10.8 133 1-134 102-240 (673)
154 KOG0771|consensus 99.7 7.1E-16 1.5E-20 94.3 10.1 108 24-133 148-311 (398)
155 KOG1034|consensus 99.7 1.8E-16 4E-21 94.7 7.4 92 2-93 117-211 (385)
156 KOG1445|consensus 99.7 2.5E-16 5.3E-21 101.6 8.3 131 2-133 652-798 (1012)
157 KOG1310|consensus 99.7 3.5E-16 7.6E-21 99.2 8.6 121 13-133 43-178 (758)
158 KOG2919|consensus 99.7 3.7E-15 7.9E-20 89.2 11.7 131 2-133 135-281 (406)
159 KOG1517|consensus 99.7 5.7E-15 1.2E-19 99.7 13.8 133 1-133 1188-1333(1387)
160 KOG0649|consensus 99.7 7E-15 1.5E-19 85.1 12.4 113 21-134 115-236 (325)
161 KOG1007|consensus 99.7 1.1E-15 2.5E-20 90.1 9.3 130 2-132 146-288 (370)
162 KOG2919|consensus 99.7 3.1E-15 6.8E-20 89.5 11.1 133 1-134 180-328 (406)
163 KOG2096|consensus 99.7 2.4E-15 5.2E-20 89.9 10.4 129 2-131 252-400 (420)
164 KOG0299|consensus 99.7 9.1E-16 2E-20 94.9 8.9 111 22-133 204-316 (479)
165 KOG0290|consensus 99.7 1.5E-14 3.2E-19 85.6 13.0 129 1-130 174-362 (364)
166 KOG2445|consensus 99.7 2.3E-14 5E-19 85.2 13.8 118 15-132 7-143 (361)
167 KOG0307|consensus 99.7 4.6E-16 1E-20 104.7 7.1 132 1-133 91-240 (1049)
168 KOG2106|consensus 99.7 4.9E-14 1.1E-18 88.7 15.4 125 1-131 391-519 (626)
169 KOG0307|consensus 99.6 1.5E-15 3.2E-20 102.4 9.0 132 2-133 186-327 (1049)
170 KOG4328|consensus 99.6 1.5E-15 3.2E-20 94.1 8.3 132 1-132 258-398 (498)
171 PRK01742 tolB translocation pr 99.6 3.5E-14 7.6E-19 91.0 14.2 127 2-132 186-321 (429)
172 KOG1963|consensus 99.6 4.2E-14 9E-19 93.3 14.6 131 2-132 183-321 (792)
173 KOG1063|consensus 99.6 4.1E-15 8.9E-20 96.2 9.3 118 15-133 520-648 (764)
174 KOG2110|consensus 99.6 3E-13 6.5E-18 82.1 16.5 94 1-94 154-249 (391)
175 KOG1009|consensus 99.6 4.8E-14 1E-18 86.4 13.1 116 18-133 11-153 (434)
176 KOG1408|consensus 99.6 1.8E-14 3.9E-19 94.2 11.8 133 1-133 482-671 (1080)
177 KOG0321|consensus 99.6 6.1E-15 1.3E-19 94.7 9.1 116 18-134 99-249 (720)
178 KOG0650|consensus 99.6 2.6E-15 5.5E-20 96.0 7.2 130 1-130 588-732 (733)
179 PRK01742 tolB translocation pr 99.6 7.1E-14 1.5E-18 89.6 13.9 127 2-133 230-361 (429)
180 KOG1272|consensus 99.6 1.9E-15 4.2E-20 93.9 6.4 125 4-130 235-359 (545)
181 KOG2394|consensus 99.6 1.1E-14 2.4E-19 92.1 9.7 113 21-133 220-362 (636)
182 KOG0771|consensus 99.6 2.1E-14 4.6E-19 88.0 10.1 128 1-130 167-351 (398)
183 PRK11028 6-phosphogluconolacto 99.6 5.6E-13 1.2E-17 82.9 16.7 132 1-133 13-156 (330)
184 KOG0290|consensus 99.6 1.2E-13 2.6E-18 81.8 12.7 114 20-133 150-318 (364)
185 KOG3881|consensus 99.6 1.3E-13 2.8E-18 84.2 13.1 133 2-134 175-321 (412)
186 KOG2139|consensus 99.6 1.3E-13 2.9E-18 83.8 12.7 129 1-132 121-267 (445)
187 PF08662 eIF2A: Eukaryotic tra 99.6 3.4E-13 7.3E-18 77.9 13.9 106 26-133 11-133 (194)
188 COG2319 FOG: WD40 repeat [Gene 99.6 1.1E-12 2.4E-17 82.7 17.4 131 1-133 135-271 (466)
189 KOG0642|consensus 99.6 8.6E-14 1.9E-18 88.3 11.6 94 1-94 317-427 (577)
190 PRK05137 tolB translocation pr 99.6 6.2E-13 1.3E-17 85.5 15.8 128 2-133 184-322 (435)
191 KOG4328|consensus 99.6 1.1E-13 2.5E-18 85.9 11.4 131 2-133 303-450 (498)
192 KOG1538|consensus 99.6 7E-15 1.5E-19 95.6 6.3 125 2-131 35-160 (1081)
193 KOG1272|consensus 99.6 9.5E-15 2E-19 91.0 6.6 130 2-134 193-324 (545)
194 PRK02889 tolB translocation pr 99.6 1.1E-12 2.4E-17 84.2 15.9 131 2-133 222-360 (427)
195 KOG1539|consensus 99.6 7.2E-13 1.6E-17 87.6 15.1 129 2-131 184-316 (910)
196 COG2319 FOG: WD40 repeat [Gene 99.6 2E-12 4.4E-17 81.5 16.8 132 1-133 179-314 (466)
197 KOG4227|consensus 99.6 1E-13 2.2E-18 85.3 10.3 116 18-133 54-179 (609)
198 PRK03629 tolB translocation pr 99.6 1.8E-12 3.9E-17 83.2 16.1 129 2-133 181-319 (429)
199 KOG0649|consensus 99.6 1.1E-12 2.5E-17 76.2 13.6 126 2-132 138-273 (325)
200 PRK04922 tolB translocation pr 99.6 8.3E-13 1.8E-17 84.9 14.5 129 2-133 186-324 (433)
201 KOG1523|consensus 99.5 2.8E-13 6E-18 81.1 10.9 130 2-131 34-174 (361)
202 KOG2106|consensus 99.5 8.1E-13 1.8E-17 83.4 12.4 129 2-131 182-314 (626)
203 KOG0642|consensus 99.5 1.6E-13 3.5E-18 87.1 9.3 119 15-133 289-426 (577)
204 KOG1524|consensus 99.5 8.3E-14 1.8E-18 88.5 7.5 85 10-94 94-217 (737)
205 PRK11028 6-phosphogluconolacto 99.5 9.7E-12 2.1E-16 77.4 16.5 131 2-133 59-205 (330)
206 PRK05137 tolB translocation pr 99.5 4.5E-12 9.8E-17 81.6 15.3 130 1-133 227-366 (435)
207 KOG0644|consensus 99.5 1.3E-14 2.8E-19 96.0 3.3 112 18-133 188-300 (1113)
208 KOG3881|consensus 99.5 3.1E-13 6.7E-18 82.6 8.9 115 1-115 227-342 (412)
209 KOG2111|consensus 99.5 1.2E-11 2.5E-16 74.2 15.2 93 2-94 161-257 (346)
210 PRK03629 tolB translocation pr 99.5 1.1E-11 2.4E-16 79.7 15.7 129 2-133 225-363 (429)
211 KOG2321|consensus 99.5 9.3E-13 2E-17 84.3 10.5 132 2-133 157-302 (703)
212 PF02239 Cytochrom_D1: Cytochr 99.5 3.1E-11 6.7E-16 76.0 17.3 131 1-133 17-158 (369)
213 KOG2139|consensus 99.5 3.1E-12 6.7E-17 78.0 11.9 112 18-131 194-307 (445)
214 KOG1523|consensus 99.5 5.7E-12 1.2E-16 75.6 12.7 119 15-133 5-130 (361)
215 TIGR02800 propeller_TolB tol-p 99.5 1.8E-11 3.9E-16 78.4 15.6 129 2-133 216-354 (417)
216 PRK00178 tolB translocation pr 99.5 2.4E-11 5.2E-16 78.2 15.8 129 2-133 181-319 (430)
217 PRK04922 tolB translocation pr 99.5 2.4E-11 5.3E-16 78.2 15.5 129 2-133 230-368 (433)
218 KOG0322|consensus 99.4 4.3E-13 9.3E-18 78.5 6.6 75 17-92 248-322 (323)
219 KOG0650|consensus 99.4 1.7E-11 3.7E-16 79.0 14.0 131 1-133 423-595 (733)
220 PRK02889 tolB translocation pr 99.4 1.2E-11 2.7E-16 79.4 13.7 125 2-131 178-312 (427)
221 KOG0974|consensus 99.4 3.6E-12 7.7E-17 85.9 11.4 127 2-133 157-288 (967)
222 KOG2445|consensus 99.4 3.2E-11 6.8E-16 72.2 13.9 131 1-132 36-206 (361)
223 KOG1538|consensus 99.4 6.4E-13 1.4E-17 86.7 7.2 99 21-123 14-112 (1081)
224 KOG0974|consensus 99.4 1.4E-11 2.9E-16 83.2 13.3 129 2-132 111-245 (967)
225 TIGR02800 propeller_TolB tol-p 99.4 5.9E-11 1.3E-15 76.1 15.3 129 2-133 172-310 (417)
226 KOG1240|consensus 99.4 8.2E-12 1.8E-16 85.9 11.6 124 9-133 1037-1225(1431)
227 PRK04792 tolB translocation pr 99.4 8.8E-11 1.9E-15 75.9 15.3 129 2-133 200-338 (448)
228 PRK01029 tolB translocation pr 99.4 1.6E-10 3.5E-15 74.3 16.3 130 4-133 261-403 (428)
229 KOG4547|consensus 99.4 9E-11 2E-15 75.2 14.0 128 1-131 81-218 (541)
230 PRK00178 tolB translocation pr 99.4 2.5E-10 5.4E-15 73.6 15.4 130 2-134 225-364 (430)
231 KOG3914|consensus 99.3 5.2E-12 1.1E-16 77.5 7.0 98 3-102 135-232 (390)
232 PRK04792 tolB translocation pr 99.3 4E-10 8.8E-15 72.9 16.0 129 2-133 244-382 (448)
233 PF02239 Cytochrom_D1: Cytochr 99.3 1.1E-10 2.4E-15 73.6 12.9 101 33-134 6-109 (369)
234 KOG1587|consensus 99.3 2.9E-10 6.2E-15 74.5 14.5 127 2-129 224-374 (555)
235 KOG1587|consensus 99.3 2.4E-11 5.1E-16 79.4 9.5 114 20-133 398-516 (555)
236 KOG1310|consensus 99.3 9E-12 2E-16 79.7 7.2 131 2-132 74-230 (758)
237 PRK01029 tolB translocation pr 99.3 7.3E-10 1.6E-14 71.3 15.7 132 2-134 213-360 (428)
238 KOG3914|consensus 99.3 1.4E-10 2.9E-15 71.4 11.1 107 26-134 113-224 (390)
239 KOG4227|consensus 99.3 2.3E-10 4.9E-15 71.0 12.1 131 2-133 80-225 (609)
240 KOG4714|consensus 99.3 2.8E-11 6.1E-16 71.0 7.8 72 23-94 182-255 (319)
241 KOG2321|consensus 99.3 1.1E-10 2.3E-15 75.1 10.9 129 2-131 199-341 (703)
242 KOG2315|consensus 99.3 8.3E-10 1.8E-14 70.7 14.7 126 2-133 253-390 (566)
243 KOG4497|consensus 99.3 3.1E-10 6.8E-15 68.9 12.0 128 2-131 73-238 (447)
244 KOG1517|consensus 99.3 1.6E-10 3.4E-15 79.1 11.6 130 1-133 1232-1381(1387)
245 COG4946 Uncharacterized protei 99.2 1E-09 2.2E-14 69.6 13.1 117 2-120 384-504 (668)
246 KOG4532|consensus 99.2 3.6E-09 7.9E-14 62.7 14.4 112 23-134 161-283 (344)
247 PF11768 DUF3312: Protein of u 99.2 3.9E-09 8.5E-14 68.2 15.2 119 13-133 199-329 (545)
248 PF00400 WD40: WD domain, G-be 99.2 1.2E-10 2.6E-15 49.9 5.9 39 10-48 1-39 (39)
249 PF00400 WD40: WD domain, G-be 99.2 7.5E-11 1.6E-15 50.6 5.0 36 56-91 4-39 (39)
250 KOG4547|consensus 99.2 4E-09 8.7E-14 67.9 14.5 132 2-134 17-173 (541)
251 KOG0644|consensus 99.2 7.2E-12 1.6E-16 83.5 2.2 87 2-93 214-300 (1113)
252 KOG0280|consensus 99.2 2.4E-10 5.2E-15 68.2 8.2 101 16-116 161-265 (339)
253 KOG1334|consensus 99.2 1.7E-10 3.6E-15 72.9 7.2 120 14-133 136-263 (559)
254 KOG1963|consensus 99.1 8.5E-09 1.8E-13 69.1 13.9 117 15-134 246-376 (792)
255 KOG1524|consensus 99.1 2.7E-09 5.7E-14 68.7 10.8 99 17-129 183-282 (737)
256 KOG4497|consensus 99.1 3.1E-09 6.8E-14 64.7 9.8 130 2-132 193-390 (447)
257 KOG2695|consensus 99.1 1.6E-09 3.4E-14 66.2 8.5 114 18-133 251-376 (425)
258 KOG0280|consensus 99.1 5.1E-09 1.1E-13 62.7 10.3 109 26-134 127-242 (339)
259 PF11768 DUF3312: Protein of u 99.1 1E-08 2.3E-13 66.3 12.2 88 3-94 239-330 (545)
260 KOG1409|consensus 99.1 4.1E-09 8.8E-14 64.3 9.8 86 9-94 186-271 (404)
261 PRK04043 tolB translocation pr 99.1 5.7E-08 1.2E-12 62.5 15.5 111 20-133 188-309 (419)
262 PLN02919 haloacid dehalogenase 99.1 7.6E-08 1.7E-12 68.2 17.2 109 26-134 745-889 (1057)
263 TIGR02658 TTQ_MADH_Hv methylam 99.1 1.2E-07 2.7E-12 59.4 16.2 103 1-105 28-148 (352)
264 KOG2041|consensus 99.0 3.1E-09 6.6E-14 70.7 8.8 110 20-129 14-141 (1189)
265 PRK04043 tolB translocation pr 99.0 1E-07 2.2E-12 61.5 15.5 127 2-133 215-357 (419)
266 PF10282 Lactonase: Lactonase, 99.0 1.2E-07 2.6E-12 59.7 15.4 130 2-132 168-321 (345)
267 COG4946 Uncharacterized protei 99.0 1.5E-07 3.2E-12 60.2 15.3 113 18-133 358-477 (668)
268 KOG1240|consensus 99.0 1.5E-08 3.2E-13 70.7 11.5 132 2-133 1175-1334(1431)
269 KOG1064|consensus 99.0 8.2E-09 1.8E-13 74.4 9.6 129 1-133 2231-2366(2439)
270 KOG2314|consensus 98.9 3.8E-08 8.3E-13 63.7 9.8 108 22-133 212-334 (698)
271 KOG1354|consensus 98.9 6.1E-08 1.3E-12 59.5 10.0 116 18-133 23-193 (433)
272 KOG2315|consensus 98.9 3.7E-08 8.1E-13 63.4 9.3 106 2-114 296-410 (566)
273 TIGR02658 TTQ_MADH_Hv methylam 98.9 7.6E-07 1.7E-11 55.9 14.4 103 31-134 205-331 (352)
274 COG0823 TolB Periplasmic compo 98.9 1.6E-07 3.5E-12 60.4 11.8 128 2-132 220-357 (425)
275 COG2706 3-carboxymuconate cycl 98.8 2.5E-06 5.4E-11 52.7 15.7 130 2-132 169-320 (346)
276 PF10282 Lactonase: Lactonase, 98.8 2.2E-06 4.8E-11 54.1 16.2 131 2-133 15-174 (345)
277 KOG1275|consensus 98.8 2.7E-07 5.9E-12 63.0 12.5 124 3-131 160-340 (1118)
278 KOG1064|consensus 98.8 9.8E-09 2.1E-13 74.0 6.0 92 33-133 2303-2398(2439)
279 PF07433 DUF1513: Protein of u 98.8 4E-06 8.7E-11 51.4 16.0 80 2-81 30-116 (305)
280 COG2706 3-carboxymuconate cycl 98.8 1.8E-06 4E-11 53.2 14.0 131 2-133 18-175 (346)
281 KOG1354|consensus 98.8 1.3E-07 2.9E-12 58.1 8.9 114 19-133 163-301 (433)
282 PF08553 VID27: VID27 cytoplas 98.8 1.2E-06 2.5E-11 60.1 14.2 129 2-132 506-646 (794)
283 PRK02888 nitrous-oxide reducta 98.8 3.1E-06 6.7E-11 56.5 15.3 130 2-133 217-404 (635)
284 PF13360 PQQ_2: PQQ-like domai 98.8 2.2E-06 4.8E-11 51.1 13.7 131 1-134 4-141 (238)
285 KOG3621|consensus 98.7 1.4E-07 3E-12 62.5 8.6 107 26-132 39-153 (726)
286 PF15492 Nbas_N: Neuroblastoma 98.7 3.1E-06 6.6E-11 50.9 13.2 111 23-133 46-259 (282)
287 PF04762 IKI3: IKI3 family; I 98.7 1.5E-06 3.2E-11 61.1 13.7 129 2-132 239-378 (928)
288 KOG4714|consensus 98.7 3.2E-08 7E-13 58.5 4.7 90 43-133 160-254 (319)
289 TIGR03300 assembly_YfgL outer 98.7 2.4E-06 5.1E-11 54.5 13.5 122 2-130 253-376 (377)
290 COG5354 Uncharacterized protei 98.7 2.4E-06 5.3E-11 55.0 13.2 110 19-133 274-395 (561)
291 KOG0309|consensus 98.7 6.6E-08 1.4E-12 64.7 6.4 130 4-133 95-232 (1081)
292 KOG1334|consensus 98.7 7E-08 1.5E-12 61.5 5.9 132 1-133 165-312 (559)
293 KOG2695|consensus 98.7 2.8E-07 6.2E-12 56.7 7.9 111 2-113 276-401 (425)
294 PLN02919 haloacid dehalogenase 98.7 1.6E-05 3.5E-10 56.9 17.5 107 25-133 687-833 (1057)
295 KOG4190|consensus 98.7 2.8E-07 6.1E-12 60.2 8.0 132 1-134 758-907 (1034)
296 KOG4640|consensus 98.6 4.2E-07 9.1E-12 59.8 8.6 91 21-114 22-115 (665)
297 KOG4532|consensus 98.6 8.8E-06 1.9E-10 48.8 12.7 102 20-122 204-320 (344)
298 KOG1912|consensus 98.6 3.7E-06 8E-11 57.0 12.4 129 2-131 37-184 (1062)
299 KOG1409|consensus 98.6 1.8E-06 3.8E-11 53.2 9.9 79 55-133 189-270 (404)
300 KOG1645|consensus 98.6 5.1E-07 1.1E-11 56.6 7.6 89 44-133 175-266 (463)
301 PF13360 PQQ_2: PQQ-like domai 98.6 2.1E-05 4.5E-10 47.0 14.5 100 2-103 48-150 (238)
302 KOG2066|consensus 98.6 5.4E-06 1.2E-10 56.1 12.3 100 30-134 81-188 (846)
303 COG5354 Uncharacterized protei 98.5 2.4E-05 5.2E-10 50.7 13.8 128 1-133 203-348 (561)
304 KOG2314|consensus 98.5 6.6E-06 1.4E-10 53.8 11.0 119 13-132 439-572 (698)
305 KOG2041|consensus 98.5 4.4E-07 9.5E-12 61.0 5.6 119 14-133 65-186 (1189)
306 KOG0309|consensus 98.5 1.2E-06 2.6E-11 59.0 7.6 115 2-117 139-258 (1081)
307 KOG4640|consensus 98.5 1.9E-06 4.2E-11 56.8 8.3 71 63-134 20-93 (665)
308 PF08450 SGL: SMP-30/Gluconola 98.5 5E-05 1.1E-09 45.8 15.2 125 2-133 24-164 (246)
309 PF08450 SGL: SMP-30/Gluconola 98.5 5.5E-05 1.2E-09 45.6 16.1 116 3-121 118-242 (246)
310 KOG1832|consensus 98.4 3.2E-07 6.9E-12 63.0 4.5 118 13-134 1094-1215(1516)
311 TIGR03300 assembly_YfgL outer 98.4 5.6E-05 1.2E-09 48.4 14.4 126 2-133 77-208 (377)
312 smart00320 WD40 WD40 repeats. 98.4 2.7E-06 5.7E-11 35.2 5.7 39 10-48 2-40 (40)
313 COG5170 CDC55 Serine/threonine 98.4 3.6E-06 7.9E-11 51.5 7.8 112 21-133 173-309 (460)
314 PRK02888 nitrous-oxide reducta 98.3 7.2E-05 1.6E-09 50.3 12.8 92 2-94 298-405 (635)
315 smart00320 WD40 WD40 repeats. 98.3 2.6E-06 5.7E-11 35.2 4.4 35 57-91 6-40 (40)
316 KOG3621|consensus 98.3 1E-05 2.2E-10 54.1 8.7 93 2-94 57-155 (726)
317 KOG1645|consensus 98.3 6.1E-06 1.3E-10 51.9 7.0 92 3-96 176-269 (463)
318 KOG2066|consensus 98.3 0.00014 3.1E-09 49.7 13.6 124 4-133 97-233 (846)
319 KOG0882|consensus 98.3 8.2E-05 1.8E-09 47.8 11.5 97 38-134 118-232 (558)
320 PF14783 BBS2_Mid: Ciliary BBS 98.2 9.8E-05 2.1E-09 38.7 9.9 65 66-132 2-70 (111)
321 COG0823 TolB Periplasmic compo 98.2 3.6E-05 7.8E-10 50.0 9.8 117 2-121 264-386 (425)
322 KOG2395|consensus 98.2 0.00012 2.7E-09 48.0 11.9 129 2-132 358-499 (644)
323 PRK11138 outer membrane biogen 98.2 0.00034 7.3E-09 45.2 13.4 124 2-132 268-393 (394)
324 COG3391 Uncharacterized conser 98.2 0.00052 1.1E-08 44.2 15.8 129 2-133 98-239 (381)
325 PRK13616 lipoprotein LpqB; Pro 98.2 9.9E-05 2.1E-09 49.9 11.0 101 23-129 352-472 (591)
326 KOG4190|consensus 98.1 6.6E-06 1.4E-10 54.1 5.2 107 26-134 741-860 (1034)
327 KOG2114|consensus 98.1 0.001 2.2E-08 46.2 15.4 132 2-133 94-243 (933)
328 KOG3617|consensus 98.1 3.5E-06 7.6E-11 57.9 3.9 84 8-93 48-131 (1416)
329 KOG1008|consensus 98.1 4.4E-07 9.5E-12 60.0 -0.3 112 20-131 102-223 (783)
330 KOG1912|consensus 98.1 0.00043 9.3E-09 47.7 12.8 132 1-132 136-303 (1062)
331 COG5170 CDC55 Serine/threonine 98.1 0.0001 2.2E-09 45.5 8.9 114 20-133 26-201 (460)
332 PF14783 BBS2_Mid: Ciliary BBS 98.1 0.00026 5.7E-09 37.1 14.1 90 33-129 16-110 (111)
333 PF04762 IKI3: IKI3 family; I 98.1 0.00015 3.3E-09 51.5 10.8 108 21-132 211-332 (928)
334 KOG1008|consensus 98.0 1.5E-06 3.3E-11 57.5 0.5 130 1-133 130-275 (783)
335 KOG3617|consensus 98.0 4.9E-05 1.1E-09 52.6 7.2 109 21-132 16-130 (1416)
336 KOG1920|consensus 98.0 0.00047 1E-08 49.3 11.7 129 2-132 224-364 (1265)
337 PRK11138 outer membrane biogen 97.9 0.00064 1.4E-08 43.9 11.5 97 2-102 132-232 (394)
338 PF08553 VID27: VID27 cytoplas 97.9 0.00019 4.1E-09 49.8 9.2 88 2-92 554-646 (794)
339 COG3490 Uncharacterized protei 97.9 0.0015 3.1E-08 40.2 11.4 120 3-122 94-243 (366)
340 KOG4649|consensus 97.9 0.0016 3.4E-08 39.5 13.3 94 31-125 62-157 (354)
341 PF12234 Rav1p_C: RAVE protein 97.9 0.0033 7.1E-08 43.0 14.8 105 26-131 35-154 (631)
342 KOG2079|consensus 97.9 0.00014 3E-09 51.3 7.6 92 31-122 98-193 (1206)
343 PF04053 Coatomer_WDAD: Coatom 97.8 0.00039 8.6E-09 45.5 9.3 56 75-132 117-172 (443)
344 KOG2114|consensus 97.8 0.00064 1.4E-08 47.1 10.3 104 26-131 29-153 (933)
345 COG3391 Uncharacterized conser 97.8 0.0027 5.8E-08 41.0 14.0 106 26-133 79-190 (381)
346 PF12894 Apc4_WD40: Anaphase-p 97.8 0.00014 3.1E-09 32.2 5.1 34 63-97 11-44 (47)
347 COG3386 Gluconolactonase [Carb 97.8 0.0028 6E-08 39.7 14.9 112 9-121 151-272 (307)
348 KOG0882|consensus 97.8 0.0015 3.2E-08 42.4 10.6 115 18-133 143-305 (558)
349 PF06433 Me-amine-dh_H: Methyl 97.8 0.0033 7.1E-08 39.7 13.1 128 2-132 19-164 (342)
350 PF00930 DPPIV_N: Dipeptidyl p 97.7 0.00024 5.2E-09 45.2 7.1 98 29-129 1-127 (353)
351 PF08596 Lgl_C: Lethal giant l 97.7 0.004 8.7E-08 40.4 12.4 108 24-132 5-172 (395)
352 KOG1275|consensus 97.7 0.0001 2.3E-09 51.2 5.3 89 2-91 248-340 (1118)
353 PF10313 DUF2415: Uncharacteri 97.7 0.00024 5.2E-09 30.6 4.6 28 106-133 2-33 (43)
354 KOG1920|consensus 97.7 0.0063 1.4E-07 44.1 13.5 68 20-90 69-136 (1265)
355 PF15492 Nbas_N: Neuroblastoma 97.7 0.0034 7.3E-08 38.3 10.8 42 63-104 229-270 (282)
356 KOG4649|consensus 97.7 0.0035 7.5E-08 38.2 11.3 101 31-134 22-124 (354)
357 PF02897 Peptidase_S9_N: Proly 97.7 0.0028 6.1E-08 41.3 11.3 107 25-133 128-260 (414)
358 KOG1832|consensus 97.6 3.2E-05 6.9E-10 53.8 2.2 115 2-120 1125-1246(1516)
359 PF12894 Apc4_WD40: Anaphase-p 97.6 0.00038 8.2E-09 30.8 4.8 28 23-50 14-41 (47)
360 PF05694 SBP56: 56kDa selenium 97.6 0.0062 1.3E-07 39.7 11.8 121 1-122 223-391 (461)
361 PF00780 CNH: CNH domain; Int 97.6 0.0049 1.1E-07 37.8 10.8 98 31-132 6-121 (275)
362 PF04053 Coatomer_WDAD: Coatom 97.6 0.0088 1.9E-07 39.5 12.3 123 2-132 128-261 (443)
363 PF06977 SdiA-regulated: SdiA- 97.5 0.0064 1.4E-07 37.0 12.5 109 21-130 118-247 (248)
364 PF03178 CPSF_A: CPSF A subuni 97.5 0.0084 1.8E-07 37.8 14.2 127 2-129 109-261 (321)
365 PRK13616 lipoprotein LpqB; Pro 97.5 0.013 2.8E-07 40.2 12.6 97 23-124 399-516 (591)
366 PF07569 Hira: TUP1-like enhan 97.5 0.0026 5.7E-08 37.9 8.2 63 71-133 18-95 (219)
367 PF00780 CNH: CNH domain; Int 97.4 0.012 2.6E-07 36.2 15.2 128 2-133 18-165 (275)
368 PF07433 DUF1513: Protein of u 97.4 0.013 2.8E-07 36.6 13.9 125 2-129 140-281 (305)
369 PF03178 CPSF_A: CPSF A subuni 97.3 0.015 3.2E-07 36.7 15.6 125 2-132 64-201 (321)
370 KOG2444|consensus 97.3 0.0062 1.3E-07 36.2 8.4 102 32-133 70-177 (238)
371 PF05096 Glu_cyclase_2: Glutam 97.3 0.014 3E-07 35.7 15.9 120 12-134 35-158 (264)
372 KOG2079|consensus 97.3 0.0038 8.2E-08 44.7 8.2 67 19-86 129-198 (1206)
373 KOG2395|consensus 97.2 0.0055 1.2E-07 40.8 8.0 67 23-92 433-499 (644)
374 PF00930 DPPIV_N: Dipeptidyl p 97.1 0.002 4.3E-08 41.2 5.5 49 85-133 23-71 (353)
375 PF04841 Vps16_N: Vps16, N-ter 97.1 0.037 8.1E-07 36.3 15.5 46 2-50 63-109 (410)
376 PF07569 Hira: TUP1-like enhan 97.0 0.017 3.7E-07 34.5 8.5 69 28-97 18-99 (219)
377 PF14655 RAB3GAP2_N: Rab3 GTPa 97.0 0.047 1E-06 35.8 11.8 87 16-103 303-408 (415)
378 PF02897 Peptidase_S9_N: Proly 97.0 0.046 1E-06 35.8 16.0 132 1-133 151-309 (414)
379 PF06433 Me-amine-dh_H: Methyl 97.0 0.042 9E-07 35.0 14.7 49 86-134 270-321 (342)
380 PF06977 SdiA-regulated: SdiA- 97.0 0.035 7.5E-07 33.9 12.0 109 20-130 21-144 (248)
381 PF10168 Nup88: Nuclear pore c 96.9 0.04 8.6E-07 38.8 10.5 69 64-133 85-179 (717)
382 COG5167 VID27 Protein involved 96.9 0.064 1.4E-06 36.1 10.7 127 3-132 493-631 (776)
383 PF10313 DUF2415: Uncharacteri 96.9 0.0081 1.8E-07 25.9 4.6 31 64-94 1-34 (43)
384 PF14761 HPS3_N: Hermansky-Pud 96.9 0.037 8.1E-07 32.8 14.3 100 33-133 29-163 (215)
385 cd00216 PQQ_DH Dehydrogenases 96.8 0.071 1.5E-06 35.9 13.5 127 2-134 258-425 (488)
386 PF10647 Gmad1: Lipoprotein Lp 96.8 0.047 1E-06 33.4 11.7 104 23-130 26-141 (253)
387 COG3204 Uncharacterized protei 96.8 0.053 1.1E-06 33.7 10.7 110 21-131 86-208 (316)
388 PF14781 BBS2_N: Ciliary BBSom 96.7 0.033 7.1E-07 30.5 12.2 105 26-132 4-124 (136)
389 COG3490 Uncharacterized protei 96.7 0.063 1.4E-06 33.4 11.7 113 9-123 57-180 (366)
390 PF14870 PSII_BNR: Photosynthe 96.7 0.07 1.5E-06 33.6 14.5 107 21-129 145-257 (302)
391 PF15390 DUF4613: Domain of un 96.6 0.11 2.4E-06 35.5 10.4 109 24-132 60-185 (671)
392 COG3386 Gluconolactonase [Carb 96.6 0.081 1.7E-06 33.4 12.4 70 64-133 111-193 (307)
393 KOG4460|consensus 96.6 0.11 2.5E-06 35.1 10.3 69 65-133 105-198 (741)
394 PF11715 Nup160: Nucleoporin N 96.5 0.046 1E-06 37.2 8.5 71 31-101 157-256 (547)
395 TIGR03075 PQQ_enz_alc_DH PQQ-d 96.5 0.15 3.2E-06 34.8 15.0 52 2-54 273-337 (527)
396 PF12234 Rav1p_C: RAVE protein 96.4 0.13 2.8E-06 35.7 9.9 89 1-92 52-155 (631)
397 TIGR02276 beta_rpt_yvtn 40-res 96.4 0.022 4.7E-07 24.1 6.1 41 73-113 1-42 (42)
398 cd00216 PQQ_DH Dehydrogenases 96.2 0.2 4.3E-06 33.8 12.4 82 40-121 364-454 (488)
399 PHA02713 hypothetical protein; 96.2 0.14 2.9E-06 35.2 9.6 60 74-134 463-534 (557)
400 KOG1916|consensus 96.1 0.012 2.7E-07 41.8 4.1 66 26-93 186-265 (1283)
401 PF10168 Nup88: Nuclear pore c 96.0 0.31 6.7E-06 34.6 10.5 74 23-96 87-182 (717)
402 TIGR03075 PQQ_enz_alc_DH PQQ-d 95.9 0.14 3E-06 35.0 8.5 55 2-57 443-497 (527)
403 PF14583 Pectate_lyase22: Olig 95.9 0.25 5.5E-06 32.2 9.8 113 5-120 15-140 (386)
404 PF10214 Rrn6: RNA polymerase 95.9 0.41 9E-06 34.3 13.7 108 23-132 148-275 (765)
405 COG3204 Uncharacterized protei 95.9 0.19 4.2E-06 31.4 8.1 72 61-132 83-157 (316)
406 KOG4499|consensus 95.8 0.2 4.4E-06 30.4 11.1 98 18-115 155-264 (310)
407 PRK10115 protease 2; Provision 95.8 0.41 9E-06 33.9 15.6 107 23-132 129-254 (686)
408 PF14583 Pectate_lyase22: Olig 95.8 0.3 6.4E-06 31.9 13.7 118 2-121 170-299 (386)
409 COG4590 ABC-type uncharacteriz 95.8 0.26 5.6E-06 33.0 8.8 102 32-133 280-386 (733)
410 KOG2247|consensus 95.8 0.00067 1.5E-08 44.5 -2.5 111 10-122 65-177 (615)
411 KOG3630|consensus 95.7 0.042 9E-07 40.2 5.6 96 24-121 159-260 (1405)
412 KOG2377|consensus 95.7 0.38 8.2E-06 32.2 9.8 89 26-115 28-123 (657)
413 PF04841 Vps16_N: Vps16, N-ter 95.5 0.4 8.6E-06 31.7 14.1 54 63-116 216-271 (410)
414 PF03088 Str_synth: Strictosid 95.5 0.13 2.9E-06 26.1 6.3 52 81-132 33-86 (89)
415 TIGR02171 Fb_sc_TIGR02171 Fibr 95.4 0.23 5.1E-06 35.8 8.1 77 2-79 331-414 (912)
416 KOG3630|consensus 95.2 0.11 2.3E-06 38.3 6.2 106 26-131 106-226 (1405)
417 PF14781 BBS2_N: Ciliary BBSom 95.2 0.24 5.3E-06 27.2 9.0 64 70-133 5-81 (136)
418 PF14870 PSII_BNR: Photosynthe 95.2 0.46 9.9E-06 30.1 11.9 72 60-131 141-213 (302)
419 PF08596 Lgl_C: Lethal giant l 95.1 0.57 1.2E-05 30.9 9.9 95 35-130 228-332 (395)
420 PF13570 PQQ_3: PQQ-like domai 95.0 0.1 2.2E-06 21.9 5.5 40 10-51 1-40 (40)
421 PF08728 CRT10: CRT10; InterP 94.8 0.95 2.1E-05 32.2 10.9 102 31-132 113-245 (717)
422 KOG4441|consensus 94.8 0.87 1.9E-05 31.6 11.7 129 2-134 303-453 (571)
423 PF05096 Glu_cyclase_2: Glutam 94.8 0.55 1.2E-05 29.1 16.0 97 1-102 69-166 (264)
424 KOG2444|consensus 94.4 0.15 3.2E-06 30.6 4.5 62 31-93 113-177 (238)
425 PF10214 Rrn6: RNA polymerase 94.2 0.97 2.1E-05 32.6 8.8 71 64-134 146-233 (765)
426 COG5167 VID27 Protein involved 94.1 1 2.3E-05 30.8 8.3 61 31-93 572-632 (776)
427 PRK13684 Ycf48-like protein; P 94.1 0.94 2E-05 29.1 12.2 103 23-128 175-283 (334)
428 PF15390 DUF4613: Domain of un 94.1 1.3 2.9E-05 30.7 9.2 69 26-94 118-187 (671)
429 PF12768 Rax2: Cortical protei 94.1 0.88 1.9E-05 28.5 9.9 95 2-98 18-128 (281)
430 PHA03098 kelch-like protein; P 94.0 1.3 2.8E-05 30.3 11.9 101 31-134 389-512 (534)
431 PF12657 TFIIIC_delta: Transcr 93.9 0.67 1.4E-05 26.7 8.2 28 105-132 86-120 (173)
432 PF07995 GSDH: Glucose / Sorbo 93.8 1.1 2.3E-05 28.8 10.3 96 25-121 6-130 (331)
433 PF13570 PQQ_3: PQQ-like domai 93.8 0.22 4.9E-06 20.8 4.6 20 115-134 21-40 (40)
434 KOG1897|consensus 93.8 2 4.3E-05 31.7 13.2 107 26-132 493-612 (1096)
435 PF14655 RAB3GAP2_N: Rab3 GTPa 93.2 1.6 3.6E-05 29.0 11.5 88 26-113 7-117 (415)
436 COG1520 FOG: WD40-like repeat 93.2 1.5 3.3E-05 28.5 10.6 72 33-105 69-141 (370)
437 PF14761 HPS3_N: Hermansky-Pud 93.1 1.1 2.4E-05 26.9 6.5 47 76-122 29-77 (215)
438 PHA02713 hypothetical protein; 93.0 2.1 4.6E-05 29.7 11.5 22 31-52 351-377 (557)
439 KOG2377|consensus 92.9 2 4.3E-05 29.1 8.1 97 22-120 68-169 (657)
440 PF07250 Glyoxal_oxid_N: Glyox 92.9 1.4 3E-05 27.1 11.1 122 3-124 49-189 (243)
441 PF07676 PD40: WD40-like Beta 92.8 0.34 7.5E-06 20.0 4.4 25 23-47 11-38 (39)
442 KOG1916|consensus 92.8 0.24 5.2E-06 35.9 4.1 72 26-98 241-328 (1283)
443 PF02333 Phytase: Phytase; In 92.5 2 4.4E-05 28.3 15.1 129 2-133 80-237 (381)
444 TIGR02604 Piru_Ver_Nterm putat 92.3 2.1 4.6E-05 27.9 13.8 95 25-122 76-201 (367)
445 COG3823 Glutamine cyclotransfe 92.2 1.6 3.5E-05 26.3 7.7 117 13-132 37-157 (262)
446 PF10647 Gmad1: Lipoprotein Lp 92.0 1.8 4E-05 26.6 13.1 101 22-122 67-183 (253)
447 KOG4460|consensus 91.9 2.9 6.2E-05 28.9 7.9 74 26-99 109-204 (741)
448 TIGR03074 PQQ_membr_DH membran 91.9 3.7 8E-05 29.8 9.1 75 2-77 643-738 (764)
449 KOG1897|consensus 91.7 4.3 9.4E-05 30.2 13.3 97 31-130 839-939 (1096)
450 COG5276 Uncharacterized conser 91.5 2.4 5.2E-05 27.0 15.1 95 27-123 133-232 (370)
451 KOG2280|consensus 91.0 1.3 2.9E-05 31.5 5.9 47 2-51 66-113 (829)
452 PLN00033 photosystem II stabil 90.9 3.4 7.4E-05 27.5 11.1 100 26-129 244-352 (398)
453 smart00564 PQQ beta-propeller 90.6 0.59 1.3E-05 18.3 3.8 24 77-100 8-31 (33)
454 COG5290 IkappaB kinase complex 90.6 2 4.2E-05 31.2 6.5 101 26-127 252-360 (1243)
455 TIGR03606 non_repeat_PQQ dehyd 90.5 4 8.6E-05 27.7 13.5 106 18-124 28-165 (454)
456 KOG4441|consensus 90.3 4.8 0.0001 28.2 11.7 101 31-134 427-547 (571)
457 TIGR03074 PQQ_membr_DH membran 90.1 5.7 0.00012 28.9 13.7 71 32-103 194-288 (764)
458 PF11715 Nup160: Nucleoporin N 90.1 1.1 2.4E-05 30.8 5.1 29 26-54 220-252 (547)
459 PHA03098 kelch-like protein; P 89.9 4.8 0.0001 27.7 11.6 65 31-97 342-418 (534)
460 PF13449 Phytase-like: Esteras 89.8 3.8 8.2E-05 26.3 11.7 99 21-120 20-162 (326)
461 PF12768 Rax2: Cortical protei 89.7 3.6 7.8E-05 26.0 8.8 92 40-132 14-122 (281)
462 KOG4499|consensus 89.6 3.4 7.3E-05 25.5 7.1 47 26-73 217-263 (310)
463 TIGR02604 Piru_Ver_Nterm putat 89.4 4.3 9.4E-05 26.5 14.3 98 21-121 15-140 (367)
464 TIGR02171 Fb_sc_TIGR02171 Fibr 89.3 7.2 0.00016 28.9 9.9 78 41-119 328-413 (912)
465 PF01011 PQQ: PQQ enzyme repea 89.0 1 2.2E-05 18.6 4.2 29 77-105 2-30 (38)
466 PF14779 BBS1: Ciliary BBSome 88.2 4.5 9.9E-05 25.1 8.8 68 63-130 176-255 (257)
467 COG4880 Secreted protein conta 88.0 6.3 0.00014 26.6 8.6 87 9-96 414-506 (603)
468 PRK13684 Ycf48-like protein; P 88.0 5.4 0.00012 25.8 11.3 108 22-132 216-330 (334)
469 KOG1900|consensus 87.6 4.8 0.0001 30.8 6.9 88 39-127 96-201 (1311)
470 KOG3616|consensus 87.6 1.9 4.1E-05 31.2 4.8 34 64-97 15-48 (1636)
471 PF03088 Str_synth: Strictosid 87.4 2.6 5.7E-05 21.5 6.2 36 2-38 39-74 (89)
472 KOG1520|consensus 86.5 7.2 0.00016 25.7 8.1 48 83-130 197-246 (376)
473 KOG2247|consensus 86.5 0.36 7.8E-06 32.5 1.0 74 2-78 99-174 (615)
474 PF01436 NHL: NHL repeat; Int 86.3 1.3 2.8E-05 16.9 4.0 23 67-89 5-27 (28)
475 PF05935 Arylsulfotrans: Aryls 85.8 9.1 0.0002 26.2 13.4 125 3-133 131-301 (477)
476 PF14727 PHTB1_N: PTHB1 N-term 84.7 9.9 0.00021 25.6 13.3 103 31-133 36-163 (418)
477 PHA02790 Kelch-like protein; P 84.6 11 0.00023 25.9 10.3 66 30-97 317-388 (480)
478 PF01731 Arylesterase: Arylest 83.8 4.2 9E-05 20.6 6.7 29 105-133 54-84 (86)
479 smart00036 CNH Domain found in 83.5 9.2 0.0002 24.4 7.5 57 75-132 13-72 (302)
480 TIGR03118 PEPCTERM_chp_1 conse 83.4 9.7 0.00021 24.5 12.7 108 25-132 27-169 (336)
481 PF08728 CRT10: CRT10; InterP 83.1 15 0.00033 26.6 8.6 70 23-92 166-245 (717)
482 PRK13615 lipoprotein LpqB; Pro 81.6 16 0.00034 25.8 11.2 99 25-129 338-445 (557)
483 PRK10115 protease 2; Provision 81.5 18 0.00038 26.2 14.8 88 2-92 155-254 (686)
484 TIGR03032 conserved hypothetic 80.5 13 0.00028 24.1 6.4 47 74-122 212-258 (335)
485 PF14269 Arylsulfotran_2: Aryl 80.5 12 0.00027 23.8 7.9 39 65-103 145-183 (299)
486 KOG3616|consensus 79.8 9.4 0.0002 28.0 5.6 94 8-107 326-419 (1636)
487 PF05694 SBP56: 56kDa selenium 79.7 17 0.00036 24.8 13.6 108 26-133 186-342 (461)
488 PF14339 DUF4394: Domain of un 79.0 13 0.00027 23.0 8.1 77 19-96 26-106 (236)
489 PF05787 DUF839: Bacterial pro 78.4 15 0.00033 25.6 6.2 20 103-122 500-519 (524)
490 PLN00033 photosystem II stabil 78.3 18 0.00038 24.3 13.7 105 23-131 283-397 (398)
491 PF10433 MMS1_N: Mono-function 77.6 20 0.00044 24.7 8.7 102 29-130 219-339 (504)
492 PF14727 PHTB1_N: PTHB1 N-term 77.1 20 0.00043 24.3 8.3 59 74-132 36-104 (418)
493 TIGR03118 PEPCTERM_chp_1 conse 76.8 18 0.00038 23.5 8.2 68 65-132 24-117 (336)
494 PF11635 Med16: Mediator compl 76.6 28 0.0006 25.6 7.6 63 26-88 265-345 (753)
495 PF07995 GSDH: Glucose / Sorbo 76.4 18 0.00039 23.4 8.2 49 65-115 3-59 (331)
496 TIGR03548 mutarot_permut cycli 76.0 18 0.00038 23.2 12.1 65 31-97 123-198 (323)
497 KOG1900|consensus 76.0 36 0.00078 26.7 11.9 129 2-133 101-272 (1311)
498 TIGR03032 conserved hypothetic 74.2 21 0.00046 23.2 11.8 83 31-117 212-317 (335)
499 PF05935 Arylsulfotrans: Aryls 72.7 28 0.00061 24.0 10.6 38 65-102 272-310 (477)
500 KOG3522|consensus 70.7 21 0.00045 26.5 5.4 67 64-133 627-697 (925)
No 1
>KOG0272|consensus
Probab=99.97 E-value=1.1e-31 Score=162.35 Aligned_cols=133 Identities=20% Similarity=0.253 Sum_probs=121.2
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
++++|++.+..++..++++..-+..++|+|+|++|++++.|.+-++||+.++.... ...+|...|.+++|+|||..+++
T Consensus 242 tvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL-~QEGHs~~v~~iaf~~DGSL~~t 320 (459)
T KOG0272|consen 242 TVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELL-LQEGHSKGVFSIAFQPDGSLAAT 320 (459)
T ss_pred ceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhH-hhcccccccceeEecCCCceeec
Confidence 58999999889999999666666669999999999999999999999999976554 57899999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
|+.|..-+|||+++++++..+. |..+|.++.|+|+|..+++| +|++++|||++.
T Consensus 321 GGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~ 376 (459)
T KOG0272|consen 321 GGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRM 376 (459)
T ss_pred cCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecc
Confidence 9999999999999999999887 67899999999999999986 689999999973
No 2
>KOG0315|consensus
Probab=99.97 E-value=9e-30 Score=145.66 Aligned_cols=133 Identities=21% Similarity=0.415 Sum_probs=122.8
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCC-CCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDA-EPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
|||+|...+|.+..+++|.+..++++...|+++.|++++. ..|++||+++... +...+.+|.+.|..+.|..+|++++
T Consensus 21 TIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMy 99 (311)
T KOG0315|consen 21 TIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMY 99 (311)
T ss_pred eeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEE
Confidence 6999999999999999999999999999999999999876 5799999998765 6778999999999999999999999
Q ss_pred EeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
+|++||+++|||++...+.+.+.+.++|+++..+|+...|+++ .+|.|++||+..
T Consensus 100 TgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~ 155 (311)
T KOG0315|consen 100 TGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGE 155 (311)
T ss_pred ecCCCceEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccC
Confidence 9999999999999999999999999999999999998877777 679999999863
No 3
>KOG0271|consensus
Probab=99.97 E-value=9.2e-30 Score=153.03 Aligned_cols=133 Identities=22% Similarity=0.329 Sum_probs=118.1
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee-----CC
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK-----NN 75 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~ 75 (134)
|+|+||+.+..++.+.+++..-+.|++|+|||+.|++|+.||.|++||..++++....+.+|...|++++|.| ..
T Consensus 138 TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~ 217 (480)
T KOG0271|consen 138 TVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPC 217 (480)
T ss_pred eEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCc
Confidence 6899999999999999966666666999999999999999999999999999988889999999999999986 56
Q ss_pred CEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 76 TRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 76 ~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
++|++++.||.++|||+..+.++..+. |..+|+|++|--+|-....+.|++|++|+..
T Consensus 218 r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~ 276 (480)
T KOG0271|consen 218 RRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRAL 276 (480)
T ss_pred cceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceEEecCCCceEEEEEcc
Confidence 889999999999999999999988887 6889999999866543334579999999864
No 4
>KOG0272|consensus
Probab=99.97 E-value=2.6e-30 Score=156.41 Aligned_cols=132 Identities=22% Similarity=0.306 Sum_probs=116.8
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEe
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISC 81 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 81 (134)
-++||+.+++.+...+++...+.+++|.|||.++++|+.|..-+|||++++.++ ..+.+|..+|.+++|+|+|..++||
T Consensus 285 WRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~i-m~L~gH~k~I~~V~fsPNGy~lATg 363 (459)
T KOG0272|consen 285 WRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCI-MFLAGHIKEILSVAFSPNGYHLATG 363 (459)
T ss_pred hhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEE-EEecccccceeeEeECCCceEEeec
Confidence 479999999988777755555555999999999999999999999999998866 5788999999999999999999999
Q ss_pred eCCCcEEEEecCCCceeEEEe-cCCCCeEEEEcc-CCcEEEEe-cCCeEEEEeCCC
Q psy6446 82 AEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISR-DGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 82 ~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~-~~~~l~~~-~~~~i~i~d~~t 134 (134)
+.|++++|||++..+++.+++ |.+.|..++|+| .|.+|+++ .|+++++|..++
T Consensus 364 s~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~ 419 (459)
T KOG0272|consen 364 SSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRT 419 (459)
T ss_pred CCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCC
Confidence 999999999999999988887 678899999999 56777765 799999998653
No 5
>KOG0263|consensus
Probab=99.97 E-value=2.9e-29 Score=160.92 Aligned_cols=133 Identities=23% Similarity=0.371 Sum_probs=124.0
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
|+|+|.+.+..++..++++...+..+.|+|.|-+|++++.|++.++|...... +.+.+.+|.+.|.|++|+|+..++++
T Consensus 474 svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~-PlRifaghlsDV~cv~FHPNs~Y~aT 552 (707)
T KOG0263|consen 474 SVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNK-PLRIFAGHLSDVDCVSFHPNSNYVAT 552 (707)
T ss_pred ceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCC-chhhhcccccccceEEECCccccccc
Confidence 68999999999999999888888889999999999999999999999988744 55788999999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
|+.|.++++||..+|..++.+. |..+|.+++|+|+|++|+++ .||.|.+||+.+
T Consensus 553 GSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~ 608 (707)
T KOG0263|consen 553 GSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLAN 608 (707)
T ss_pred CCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCC
Confidence 9999999999999999999887 68999999999999999997 679999999863
No 6
>KOG0263|consensus
Probab=99.97 E-value=1.5e-29 Score=162.17 Aligned_cols=132 Identities=24% Similarity=0.445 Sum_probs=120.9
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
|.++|......+++.+.++..-+.|+.|+|+++++++||.|..+++||..++.. .+.+.||.++|.+++|+|+|++|++
T Consensus 516 tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~-VRiF~GH~~~V~al~~Sp~Gr~LaS 594 (707)
T KOG0263|consen 516 TARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNS-VRIFTGHKGPVTALAFSPCGRYLAS 594 (707)
T ss_pred eeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcE-EEEecCCCCceEEEEEcCCCceEee
Confidence 468999999999999997777777899999999999999999999999999775 4688999999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
|+.|+.|.+||+.+++.+..+. |.+.+.++.|+.+|..|+++ .|.+|++||+.
T Consensus 595 g~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~ 649 (707)
T KOG0263|consen 595 GDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLT 649 (707)
T ss_pred cccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEch
Confidence 9999999999999998887765 67889999999999999986 68999999985
No 7
>KOG0279|consensus
Probab=99.96 E-value=3.9e-28 Score=140.62 Aligned_cols=132 Identities=20% Similarity=0.304 Sum_probs=116.8
Q ss_pred CeeEeecCCCceeeEEe-eC-CCceeeEEEccC--CcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCC
Q psy6446 1 MGTVWDAVSGEELHSFQ-HP-HIVKSSVHFATD--SYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNT 76 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~-~~-~~~~~~~~~~~~--~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 76 (134)
||.+||+. +.+..++. +. ...++|+.|+|+ ...|++++.|+.+++||+++- +....+.+|.+.++.++++|||.
T Consensus 128 Tiklwnt~-g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~-~l~~~~~gh~~~v~t~~vSpDGs 205 (315)
T KOG0279|consen 128 TIKLWNTL-GVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNC-QLRTTFIGHSGYVNTVTVSPDGS 205 (315)
T ss_pred eeeeeeec-ccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCc-chhhccccccccEEEEEECCCCC
Confidence 68899987 55555554 33 677888999997 688999999999999999984 45677899999999999999999
Q ss_pred EEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 77 RLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
.+++|+.||.+.+||++.++....+.+...|.+++|+|+..+|+.+.+..|+|||+++
T Consensus 206 lcasGgkdg~~~LwdL~~~k~lysl~a~~~v~sl~fspnrywL~~at~~sIkIwdl~~ 263 (315)
T KOG0279|consen 206 LCASGGKDGEAMLWDLNEGKNLYSLEAFDIVNSLCFSPNRYWLCAATATSIKIWDLES 263 (315)
T ss_pred EEecCCCCceEEEEEccCCceeEeccCCCeEeeEEecCCceeEeeccCCceEEEeccc
Confidence 9999999999999999999999999999999999999999888888788899999864
No 8
>KOG0279|consensus
Probab=99.96 E-value=4.2e-28 Score=140.50 Aligned_cols=132 Identities=25% Similarity=0.371 Sum_probs=112.3
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEe-CCCCCEeEEEEeeC--CCE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYR-GHSSGIKHVQFFKN--NTR 77 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~-~~~~~v~~~~~~~~--~~~ 77 (134)
++++||+.+++....|.++...+.+++|++|.+++++|+.|.++++|+....... .... .+.+.|+++.|+|+ ..+
T Consensus 86 ~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~-t~~~~~~~~WVscvrfsP~~~~p~ 164 (315)
T KOG0279|consen 86 TLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKY-TIHEDSHREWVSCVRFSPNESNPI 164 (315)
T ss_pred eEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEE-EEecCCCcCcEEEEEEcCCCCCcE
Confidence 5899999999999999966666656999999999999999999999998764332 2222 23788999999997 678
Q ss_pred EEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 78 LISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+++++.|+++++||+++.+....+. +...++.++++|||...+.| .||.+.+||++
T Consensus 165 Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~ 222 (315)
T KOG0279|consen 165 IVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLN 222 (315)
T ss_pred EEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEcc
Confidence 9999999999999999888776665 57889999999999999986 68999999986
No 9
>KOG0266|consensus
Probab=99.96 E-value=2.4e-27 Score=151.40 Aligned_cols=134 Identities=28% Similarity=0.432 Sum_probs=117.9
Q ss_pred CeeEeecCCCc--eeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGE--ELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
.+++|++.+++ .+..+..+...+..++|+|++.++++++.|+++++||+.........+++|...|++++|+|+++.+
T Consensus 182 ~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i 261 (456)
T KOG0266|consen 182 LIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLL 261 (456)
T ss_pred cEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEE
Confidence 47889987777 6666665666666699999999999999999999999955545667889999999999999999999
Q ss_pred EEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++|+.|++|++||++++++...+. |...|.+++|++++.+++++ .|+.|++||+.+
T Consensus 262 ~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~ 319 (456)
T KOG0266|consen 262 VSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLET 319 (456)
T ss_pred EEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCC
Confidence 999999999999999999999888 57799999999999999986 589999999864
No 10
>KOG0286|consensus
Probab=99.96 E-value=7.3e-27 Score=136.30 Aligned_cols=131 Identities=21% Similarity=0.400 Sum_probs=117.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
|..+||+++|+.+..|.++..-+-++.++| +++.+++|+.|+..++||++.+.. .+.+.+|...|++++|.|+|.-++
T Consensus 167 TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c-~qtF~ghesDINsv~ffP~G~afa 245 (343)
T KOG0286|consen 167 TCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQC-VQTFEGHESDINSVRFFPSGDAFA 245 (343)
T ss_pred eEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcce-eEeecccccccceEEEccCCCeee
Confidence 457999999999999995444444499999 999999999999999999999754 578999999999999999999999
Q ss_pred EeeCCCcEEEEecCCCceeEEEecC---CCCeEEEEccCCcEEEEe-cCCeEEEEeC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLEFG---AVPNSLEISRDGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~-~~~~i~i~d~ 132 (134)
+|+.|++.++||++..+.+..+.++ .+|++++|+..|++|++| .|.++.+||.
T Consensus 246 tGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDt 302 (343)
T KOG0286|consen 246 TGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDT 302 (343)
T ss_pred ecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeec
Confidence 9999999999999999999888864 578999999999999997 6799999996
No 11
>KOG0266|consensus
Probab=99.96 E-value=1.2e-26 Score=148.27 Aligned_cols=132 Identities=25% Similarity=0.449 Sum_probs=114.4
Q ss_pred CeeEeec-CCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDA-VSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+|+|||+ ..+..+++++++...+.+++|+|+++.+++|+.|+.|++||+++++. ...+.+|.+.|+.++|+++++.++
T Consensus 226 tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~-~~~l~~hs~~is~~~f~~d~~~l~ 304 (456)
T KOG0266|consen 226 TLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGEC-VRKLKGHSDGISGLAFSPDGNLLV 304 (456)
T ss_pred eEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeE-EEeeeccCCceEEEEECCCCCEEE
Confidence 5899999 55688999986666667799999999999999999999999999654 467899999999999999999999
Q ss_pred EeeCCCcEEEEecCCCc--eeEEEec-C-C-CCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 80 SCAEDKTVRLWDVSASA--EVQKLEF-G-A-VPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~--~~~~~~~-~-~-~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+++.|+.+++||+.++. +...+.. . . ++.+++|+|++.+++++ .|+.+++||+.
T Consensus 305 s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~ 364 (456)
T KOG0266|consen 305 SASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLR 364 (456)
T ss_pred EcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEcc
Confidence 99999999999999998 4455442 2 2 58999999999999987 57899999986
No 12
>PTZ00420 coronin; Provisional
Probab=99.95 E-value=8.5e-26 Score=145.89 Aligned_cols=133 Identities=19% Similarity=0.293 Sum_probs=110.7
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccC-CcEEEEecCCCeEEEEECCCCCC-------CCeEEeCCCCCEeEEEEee
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATD-SYRLATGSNDKNIRIYDLNKPDA-------EPTVYRGHSSGIKHVQFFK 73 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~v~i~~~~~~~~-------~~~~~~~~~~~v~~~~~~~ 73 (134)
|++|+.....++..+.++...+.+++|+|+ +++|++|+.|+.|++||+.+... +...+.+|...|.+++|+|
T Consensus 56 I~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P 135 (568)
T PTZ00420 56 IRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNP 135 (568)
T ss_pred EEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECC
Confidence 567777666677777766666666999996 78999999999999999976421 2235678999999999999
Q ss_pred CCCEE-EEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 74 NNTRL-ISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 74 ~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++..+ ++++.|+.|++||+++++....+.+...+.+++|+|+|.+++++ .|+.|++||+++
T Consensus 136 ~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rs 198 (568)
T PTZ00420 136 MNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRK 198 (568)
T ss_pred CCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCEEEEEECCC
Confidence 88764 68899999999999999887777777889999999999999876 689999999874
No 13
>KOG0295|consensus
Probab=99.94 E-value=1.2e-25 Score=134.32 Aligned_cols=133 Identities=20% Similarity=0.298 Sum_probs=117.7
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCC-----
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNN----- 75 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----- 75 (134)
+|+.||..+|.+++++.++..-+..++.+.||..+++++.|..+++|-+.++.+. ..+++|..+|.+++|.|..
T Consensus 216 tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k-~~lR~hEh~vEci~wap~~~~~~i 294 (406)
T KOG0295|consen 216 TIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCK-AELREHEHPVECIAWAPESSYPSI 294 (406)
T ss_pred ceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhh-hhhhccccceEEEEecccccCcch
Confidence 6899999999999999966666666999999999999999999999999986544 4678999999999997631
Q ss_pred ----------CEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 76 ----------TRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 76 ----------~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
+++.+++.|++|++||+.++.++.++. |.+.|+.++|+|.|+||+++ .|+++++||+++
T Consensus 295 ~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~ 365 (406)
T KOG0295|consen 295 SEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKN 365 (406)
T ss_pred hhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEecc
Confidence 588899999999999999999999887 68899999999999999986 579999999864
No 14
>KOG0271|consensus
Probab=99.94 E-value=1.2e-26 Score=139.80 Aligned_cols=130 Identities=20% Similarity=0.366 Sum_probs=115.1
Q ss_pred CeeEeecC-CCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAV-SGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
++.+|+.. +.+++....++...++.+.|+||++++++++.|..|++|+.++++.+ ..+++|-+.|..++|+.|.+.|+
T Consensus 347 tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~l-asfRGHv~~VYqvawsaDsRLlV 425 (480)
T KOG0271|consen 347 TLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFL-ASFRGHVAAVYQVAWSADSRLLV 425 (480)
T ss_pred eEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchh-hhhhhccceeEEEEeccCccEEE
Confidence 46789876 45577777755555555999999999999999999999999998765 57899999999999999999999
Q ss_pred EeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEe
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLD 131 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d 131 (134)
+|+.|.++++||+++.+....++ |..+|.++.|+|||..++++ .|..+++|.
T Consensus 426 S~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 426 SGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred EcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence 99999999999999999988888 78999999999999999986 578899884
No 15
>KOG0285|consensus
Probab=99.94 E-value=2e-25 Score=133.64 Aligned_cols=132 Identities=21% Similarity=0.338 Sum_probs=118.2
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
||.|||+.+|+...++.++-..+..+++++...++++++.|+.|+.||+...+ ..+.+.+|-..|.+++.+|.-+.|++
T Consensus 174 tikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nk-vIR~YhGHlS~V~~L~lhPTldvl~t 252 (460)
T KOG0285|consen 174 TIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNK-VIRHYHGHLSGVYCLDLHPTLDVLVT 252 (460)
T ss_pred eeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhh-hHHHhccccceeEEEeccccceeEEe
Confidence 68999999999999999666666669999999999999999999999998855 45678999999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEE-ecCCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITV-THGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d~~ 133 (134)
++.|.++++||+++...+..+. |..+|..+.+.|....+++ +.|++|++||++
T Consensus 253 ~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~ 307 (460)
T KOG0285|consen 253 GGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLR 307 (460)
T ss_pred cCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeec
Confidence 9999999999999999998888 7899999999886655555 579999999985
No 16
>PTZ00421 coronin; Provisional
Probab=99.94 E-value=6.3e-24 Score=136.22 Aligned_cols=119 Identities=23% Similarity=0.319 Sum_probs=100.9
Q ss_pred EeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCC------CCCeEEeCCCCCEeEEEEeeCC-CEEEEeeCCCcE
Q psy6446 16 FQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPD------AEPTVYRGHSSGIKHVQFFKNN-TRLISCAEDKTV 87 (134)
Q Consensus 16 ~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i 87 (134)
+.++...+.+++|+| ++++|++++.|+.|++||+.+.. .....+.+|...|.+++|+|++ +.|++++.|+.|
T Consensus 71 l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtV 150 (493)
T PTZ00421 71 LLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVV 150 (493)
T ss_pred EeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEE
Confidence 444455566699999 88999999999999999997642 2345678999999999999975 689999999999
Q ss_pred EEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 88 RLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 88 ~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++||+.+++....+. +...|.+++|+|+|.+++++ .|+.|++||+++
T Consensus 151 rIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rs 199 (493)
T PTZ00421 151 NVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRD 199 (493)
T ss_pred EEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCC
Confidence 999999998877776 56789999999999988876 689999999874
No 17
>PTZ00421 coronin; Provisional
Probab=99.93 E-value=7.9e-24 Score=135.75 Aligned_cols=133 Identities=16% Similarity=0.218 Sum_probs=107.5
Q ss_pred CeeEeecCCC-------ceeeEEeeCCCceeeEEEccCC-cEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEe
Q psy6446 1 MGTVWDAVSG-------EELHSFQHPHIVKSSVHFATDS-YRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFF 72 (134)
Q Consensus 1 ~i~v~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~ 72 (134)
+|++||+.++ +++..+.++...+.+++|+|++ +.|++++.|+.|++||+.++.. ...+.+|...|.+++|+
T Consensus 99 tIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~-~~~l~~h~~~V~sla~s 177 (493)
T PTZ00421 99 TIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKA-VEVIKCHSDQITSLEWN 177 (493)
T ss_pred EEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeE-EEEEcCCCCceEEEEEE
Confidence 5899999765 3466677555666669999975 6899999999999999998654 35677899999999999
Q ss_pred eCCCEEEEeeCCCcEEEEecCCCceeEEEec-CC-CCeEEEEccCCcEEEE-e----cCCeEEEEeCCC
Q psy6446 73 KNNTRLISCAEDKTVRLWDVSASAEVQKLEF-GA-VPNSLEISRDGTTITV-T----HGSCVTFLDANS 134 (134)
Q Consensus 73 ~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~-~v~~~~~~~~~~~l~~-~----~~~~i~i~d~~t 134 (134)
|++..|++++.|+.|++||+++++.+..+.. .. ....+.|.+++..+++ + .|+.|++||+++
T Consensus 178 pdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~ 246 (493)
T PTZ00421 178 LDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRK 246 (493)
T ss_pred CCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCC
Confidence 9999999999999999999999988877653 32 3457788888776664 3 268999999863
No 18
>KOG0291|consensus
Probab=99.93 E-value=1.5e-24 Score=139.74 Aligned_cols=130 Identities=23% Similarity=0.345 Sum_probs=110.8
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEe
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISC 81 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 81 (134)
+.||++++...+.+.+++...+++++++|||+++++|+.||.|++||...+.+. .++..|...|+.+.|+..++.+++.
T Consensus 332 LlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~-vTFteHts~Vt~v~f~~~g~~llss 410 (893)
T KOG0291|consen 332 LLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCF-VTFTEHTSGVTAVQFTARGNVLLSS 410 (893)
T ss_pred EEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEE-EEeccCCCceEEEEEEecCCEEEEe
Confidence 679999999888888866666667999999999999999999999999988776 4789999999999999999999999
Q ss_pred eCCCcEEEEecCCCceeEEEe---------------------------------------------cCCCCeEEEEccCC
Q psy6446 82 AEDKTVRLWDVSASAEVQKLE---------------------------------------------FGAVPNSLEISRDG 116 (134)
Q Consensus 82 ~~d~~i~~~d~~~~~~~~~~~---------------------------------------------~~~~v~~~~~~~~~ 116 (134)
+-||+|+.||+...+..+++. |+++|.+++|+|++
T Consensus 411 SLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~ 490 (893)
T KOG0291|consen 411 SLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDG 490 (893)
T ss_pred ecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEcccc
Confidence 999999999986544322221 45688889999999
Q ss_pred cEEEEe-cCCeEEEEeC
Q psy6446 117 TTITVT-HGSCVTFLDA 132 (134)
Q Consensus 117 ~~l~~~-~~~~i~i~d~ 132 (134)
..|+++ .|.+|++||+
T Consensus 491 ~~LaS~SWDkTVRiW~i 507 (893)
T KOG0291|consen 491 SLLASGSWDKTVRIWDI 507 (893)
T ss_pred CeEEeccccceEEEEEe
Confidence 888876 5889999986
No 19
>KOG0278|consensus
Probab=99.93 E-value=3.7e-26 Score=131.28 Aligned_cols=133 Identities=50% Similarity=0.841 Sum_probs=123.9
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
|.++||.-+|..+..|+|...+.. ++|+.|.+.|++|+.+..+++||++..+.+...+.+|.+.|..+-|....+.+++
T Consensus 82 takvw~a~tgdelhsf~hkhivk~-~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLS 160 (334)
T KOG0278|consen 82 TAKVWDAVTGDELHSFEHKHIVKA-VAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILS 160 (334)
T ss_pred hhhhhhhhhhhhhhhhhhhheeee-EEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEe
Confidence 357899999999999998876666 9999999999999999999999999988888889999999999999998889999
Q ss_pred eeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
++.|++|++||.+++..+..+....+|.++.++++|+++.++..+.|.+||.++
T Consensus 161 Sadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~gssV~Fwdaks 214 (334)
T KOG0278|consen 161 SADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAYGSSVKFWDAKS 214 (334)
T ss_pred eccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEecCceeEEecccc
Confidence 999999999999999999999999999999999999999999999999999864
No 20
>KOG0273|consensus
Probab=99.93 E-value=2.6e-24 Score=132.37 Aligned_cols=132 Identities=20% Similarity=0.325 Sum_probs=117.1
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCC------
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNN------ 75 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------ 75 (134)
|+|+-+....|+.++.++...+.++.|+|.+.+|++++.|+++++|.+...... .-+.+|...|..+.|+|.+
T Consensus 341 i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~-~~l~~Hskei~t~~wsp~g~v~~n~ 419 (524)
T KOG0273|consen 341 IHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSV-HDLQAHSKEIYTIKWSPTGPVTSNP 419 (524)
T ss_pred EEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcch-hhhhhhccceeeEeecCCCCccCCC
Confidence 678888888899999977777777999999999999999999999998775544 4578899999999999865
Q ss_pred ---CEEEEeeCCCcEEEEecCCCceeEEE-ecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 76 ---TRLISCAEDKTVRLWDVSASAEVQKL-EFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 76 ---~~l~~~~~d~~i~~~d~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
..+++++.|+++++||...+.++..+ .|..+|.+++|+|+|+++++| .||.|++|++++
T Consensus 420 ~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~ 483 (524)
T KOG0273|consen 420 NMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKT 483 (524)
T ss_pred cCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccc
Confidence 46889999999999999999999988 689999999999999999998 589999999864
No 21
>KOG0291|consensus
Probab=99.93 E-value=3.6e-24 Score=138.06 Aligned_cols=132 Identities=27% Similarity=0.417 Sum_probs=114.0
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCC----------------------------
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPD---------------------------- 53 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~---------------------------- 53 (134)
|+|||..+|-|..+|..+...++++.|+..++.+++.+.||+|+.||+....
T Consensus 374 VKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG 453 (893)
T KOG0291|consen 374 VKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAG 453 (893)
T ss_pred EEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEee
Confidence 7999999999999999666667779999999999999999999999986211
Q ss_pred ---------------CCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCC-ceeEEEecCCCCeEEEEccCCc
Q psy6446 54 ---------------AEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSAS-AEVQKLEFGAVPNSLEISRDGT 117 (134)
Q Consensus 54 ---------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-~~~~~~~~~~~v~~~~~~~~~~ 117 (134)
++...+.+|.++|.+++|+|++..|++++.|.+|++||+-.. ....++.....+..++|+|+|+
T Consensus 454 ~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~sdvl~vsfrPdG~ 533 (893)
T KOG0291|consen 454 AQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEIRSDVLAVSFRPDGK 533 (893)
T ss_pred ccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEeeccceeEEEEcCCCC
Confidence 112246789999999999999999999999999999998643 4667777888999999999999
Q ss_pred EEEEe-cCCeEEEEeCC
Q psy6446 118 TITVT-HGSCVTFLDAN 133 (134)
Q Consensus 118 ~l~~~-~~~~i~i~d~~ 133 (134)
.++++ .||+|.+||++
T Consensus 534 elaVaTldgqItf~d~~ 550 (893)
T KOG0291|consen 534 ELAVATLDGQITFFDIK 550 (893)
T ss_pred eEEEEEecceEEEEEhh
Confidence 88875 79999999975
No 22
>KOG0315|consensus
Probab=99.93 E-value=7.3e-24 Score=121.70 Aligned_cols=130 Identities=22% Similarity=0.334 Sum_probs=110.4
Q ss_pred eeEeecCCCc--eeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 2 GTVWDAVSGE--ELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 2 i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
||+||+.+++ ++.+|+++..-+.++.|..+|+.+++|+.||.++|||++..... +. -.|..+|+++..+|+...|+
T Consensus 63 vRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~q-R~-~~~~spVn~vvlhpnQteLi 140 (311)
T KOG0315|consen 63 VRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQ-RN-YQHNSPVNTVVLHPNQTELI 140 (311)
T ss_pred eEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccc-hh-ccCCCCcceEEecCCcceEE
Confidence 8999999876 58889966555555999999999999999999999999985443 33 35779999999999999999
Q ss_pred EeeCCCcEEEEecCCCceeEEEe--cCCCCeEEEEccCCcEEEEec-CCeEEEEeCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLE--FGAVPNSLEISRDGTTITVTH-GSCVTFLDAN 133 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~ 133 (134)
++..+|.|++||+.+..+...+- ....+.++...|||..+++.. .|+..+|++-
T Consensus 141 s~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~ 197 (311)
T KOG0315|consen 141 SGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLL 197 (311)
T ss_pred eecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEcc
Confidence 99999999999999886665554 256789999999999998874 5999999974
No 23
>KOG0286|consensus
Probab=99.93 E-value=3.4e-24 Score=125.26 Aligned_cols=130 Identities=28% Similarity=0.414 Sum_probs=113.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeC--CCCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRG--HSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l 78 (134)
+.++||++++.+++.|.+++.-++++.|.|+|.-|++|+.|+..++||++...++ ..+.. ...+|++++|+..|++|
T Consensus 210 ~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~-a~ys~~~~~~gitSv~FS~SGRlL 288 (343)
T KOG0286|consen 210 SAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQEL-AVYSHDSIICGITSVAFSKSGRLL 288 (343)
T ss_pred ceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEE-eeeccCcccCCceeEEEcccccEE
Confidence 3589999999999999976666667999999999999999999999999986544 33332 23579999999999999
Q ss_pred EEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEe
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLD 131 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d 131 (134)
++|..|..+.+||.-.++....+. |+..|.|+..+|||..++++ .|..++||.
T Consensus 289 fagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 289 FAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred EeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 999999999999999888887776 78999999999999999987 589999994
No 24
>KOG0284|consensus
Probab=99.93 E-value=1.8e-25 Score=135.42 Aligned_cols=132 Identities=21% Similarity=0.388 Sum_probs=114.3
Q ss_pred CeeEeecCCCceeeEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
.|++|+.. ...++.++ ++...+.+++|+|+...|++++.||.|+|||....++. ..+.+|.-.|.+++|+|....++
T Consensus 161 ~iKyWqpn-mnnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee-~vL~GHgwdVksvdWHP~kgLia 238 (464)
T KOG0284|consen 161 MIKYWQPN-MNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEE-RVLRGHGWDVKSVDWHPTKGLIA 238 (464)
T ss_pred eEEecccc-hhhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchh-heeccCCCCcceeccCCccceeE
Confidence 36778864 44455555 66566666999999999999999999999999987655 46799999999999999999999
Q ss_pred EeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
+++.|+.|++||.+++.++.++. |...|..+.|.|++.+|+++ .|..+++||+++
T Consensus 239 sgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~ 295 (464)
T KOG0284|consen 239 SGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRT 295 (464)
T ss_pred EccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhH
Confidence 99999999999999999999887 68899999999999999975 689999999873
No 25
>KOG0276|consensus
Probab=99.92 E-value=3.8e-24 Score=135.81 Aligned_cols=133 Identities=22% Similarity=0.380 Sum_probs=115.2
Q ss_pred CeeEeecCCC-ceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee--CCC
Q psy6446 1 MGTVWDAVSG-EELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK--NNT 76 (134)
Q Consensus 1 ~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~ 76 (134)
+|++||++.+ .+.++|+++...+-.++|+| |.+.+++++.|++|++|.+....+ ..++.+|...|+++++-+ |..
T Consensus 120 ~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~-nfTl~gHekGVN~Vdyy~~gdkp 198 (794)
T KOG0276|consen 120 TIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHP-NFTLEGHEKGVNCVDYYTGGDKP 198 (794)
T ss_pred EEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCC-ceeeeccccCcceEEeccCCCcc
Confidence 5899999854 57788885555544499999 788999999999999999988654 467899999999999987 447
Q ss_pred EEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 77 RLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
+|++|+.|.++++||.++..|++++. |...|..+.|+|.=..+++| .||+++||+..|
T Consensus 199 ylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~T 258 (794)
T KOG0276|consen 199 YLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKT 258 (794)
T ss_pred eEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcc
Confidence 99999999999999999999999998 77889999999999988886 689999998754
No 26
>KOG0276|consensus
Probab=99.91 E-value=9.3e-23 Score=129.60 Aligned_cols=134 Identities=19% Similarity=0.277 Sum_probs=119.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee-CCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK-NNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~ 79 (134)
.|+||+..+++.++.|+.+...+.|++.+|...+++++|.|-.|++||.+..-...+.+.+|..-|.+++|+| |.+.++
T Consensus 78 ~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFa 157 (794)
T KOG0276|consen 78 QIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFA 157 (794)
T ss_pred eEEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCcccee
Confidence 3899999999999999955566666999999999999999999999999987777789999999999999999 778999
Q ss_pred EeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCC--cEEEEe-cCCeEEEEeCCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDG--TTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~--~~l~~~-~~~~i~i~d~~t 134 (134)
+++-|++|++|.+....+..++. |...|+|+.+-+-| ++++++ .|..|++||..|
T Consensus 158 S~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQt 216 (794)
T KOG0276|consen 158 SASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQT 216 (794)
T ss_pred eeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecch
Confidence 99999999999999988888887 67889999998755 688887 468999999864
No 27
>KOG0319|consensus
Probab=99.91 E-value=1.9e-23 Score=134.21 Aligned_cols=133 Identities=25% Similarity=0.404 Sum_probs=112.7
Q ss_pred CeeEeecCCCce-----eeE----EeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEE
Q psy6446 1 MGTVWDAVSGEE-----LHS----FQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQF 71 (134)
Q Consensus 1 ~i~v~d~~~~~~-----~~~----~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~ 71 (134)
|+++|++...+. +.+ ...++.-++|++.+|+.+++++||.|.+.++|++.. ......+.+|...|.++.|
T Consensus 435 tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~-~~l~~vLsGH~RGvw~V~F 513 (775)
T KOG0319|consen 435 TLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQ-LRLLGVLSGHTRGVWCVSF 513 (775)
T ss_pred eEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccC-ceEEEEeeCCccceEEEEe
Confidence 588999875221 111 123344455599999999999999999999999985 4455689999999999999
Q ss_pred eeCCCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEE-ecCCeEEEEeCCC
Q psy6446 72 FKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITV-THGSCVTFLDANS 134 (134)
Q Consensus 72 ~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d~~t 134 (134)
+|..+.++|++.|.+|+||.+.+..+++++. |...|..+.|-.+|..+++ ++||-|++|++++
T Consensus 514 s~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt 578 (775)
T KOG0319|consen 514 SKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKT 578 (775)
T ss_pred ccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccc
Confidence 9999999999999999999999999999998 7899999999999988776 4799999999875
No 28
>KOG0645|consensus
Probab=99.91 E-value=2.8e-22 Score=116.22 Aligned_cols=132 Identities=16% Similarity=0.244 Sum_probs=106.0
Q ss_pred CeeEeecCC---CceeeEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCC-CCCeEEeCCCCCEeEEEEeeCC
Q psy6446 1 MGTVWDAVS---GEELHSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPD-AEPTVYRGHSSGIKHVQFFKNN 75 (134)
Q Consensus 1 ~i~v~d~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~ 75 (134)
+|++|+..+ -.+...+. .+...+..++|+|.|++|+++|.|.++.||.-..+. .....+.+|...|.+++|+++|
T Consensus 38 ~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG 117 (312)
T KOG0645|consen 38 AVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASG 117 (312)
T ss_pred eEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCC
Confidence 489999874 33444444 344455559999999999999999999999865432 3346788999999999999999
Q ss_pred CEEEEeeCCCcEEEEecCCCcee---EEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeC
Q psy6446 76 TRLISCAEDKTVRLWDVSASAEV---QKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 76 ~~l~~~~~d~~i~~~d~~~~~~~---~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~ 132 (134)
++|+++++|+.+.+|.+..+... ..+. |...|..+.|+|...+|+++ .|++|++|.-
T Consensus 118 ~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~ 179 (312)
T KOG0645|consen 118 NYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRD 179 (312)
T ss_pred CEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEee
Confidence 99999999999999998865543 3333 67889999999998888875 7999999974
No 29
>KOG0264|consensus
Probab=99.91 E-value=6.2e-23 Score=125.34 Aligned_cols=132 Identities=20% Similarity=0.352 Sum_probs=108.2
Q ss_pred eeEeecC--CCceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeC-CCE
Q psy6446 2 GTVWDAV--SGEELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKN-NTR 77 (134)
Q Consensus 2 i~v~d~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~ 77 (134)
+.|||++ +.++.+..+.+...+.|++|+| ++..||+|+.|++|++||++........+.+|...|.++.|+|+ ...
T Consensus 252 L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etv 331 (422)
T KOG0264|consen 252 LMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETV 331 (422)
T ss_pred EEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCce
Confidence 6799999 5556666676667777799999 77888999999999999999988778889999999999999995 567
Q ss_pred EEEeeCCCcEEEEecCCCce------------eEEEe---cCCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 78 LISCAEDKTVRLWDVSASAE------------VQKLE---FGAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~~~~~------------~~~~~---~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
|++++.|+.+.+||+..-.. ...+. |...|..+.|+|+..+++++ .|+.+.||++.
T Consensus 332 LASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 332 LASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred eEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 78999999999999864221 12233 45788999999999887765 67999999864
No 30
>KOG0319|consensus
Probab=99.91 E-value=5.2e-23 Score=132.22 Aligned_cols=130 Identities=21% Similarity=0.332 Sum_probs=120.1
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+.+||+++....+..+.++.+.+.|+.|+|..+.++++|.|.+|+||.+.+..+. .++.||...|....|-.++..|++
T Consensus 486 taKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSCl-kT~eGH~~aVlra~F~~~~~qliS 564 (775)
T KOG0319|consen 486 TAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCL-KTFEGHTSAVLRASFIRNGKQLIS 564 (775)
T ss_pred ceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceee-eeecCccceeEeeeeeeCCcEEEe
Confidence 5689999999999999988888888999999999999999999999999997765 678999999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEe
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLD 131 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d 131 (134)
++.||.+++|++.++.|.+++. |...|.+++-+|....++++ +||.|.+|-
T Consensus 565 ~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 565 AGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWK 617 (775)
T ss_pred ccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEee
Confidence 9999999999999999999997 68899999999999877765 789999994
No 31
>KOG0282|consensus
Probab=99.91 E-value=4.3e-24 Score=131.53 Aligned_cols=124 Identities=16% Similarity=0.324 Sum_probs=110.6
Q ss_pred ceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEE
Q psy6446 11 EELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRL 89 (134)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 89 (134)
+.+..+.++...++++.|.| .+.+|++++.|+.|++|++.......+.+.+|..+|..++|+++|..+++++-|+.+++
T Consensus 205 k~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKl 284 (503)
T KOG0282|consen 205 KLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKL 284 (503)
T ss_pred hheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeee
Confidence 34566676666777799999 88999999999999999998866677889999999999999999999999999999999
Q ss_pred EecCCCceeEEEecCCCCeEEEEccCC-cEEEEe-cCCeEEEEeCCC
Q psy6446 90 WDVSASAEVQKLEFGAVPNSLEISRDG-TTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 90 ~d~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~-~~~~i~i~d~~t 134 (134)
||+.+|++...+..+..+.|+.|+|++ +.+++| .|+.|+.||+++
T Consensus 285 wDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs 331 (503)
T KOG0282|consen 285 WDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRS 331 (503)
T ss_pred eccccceEEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccc
Confidence 999999999999999999999999998 555554 789999999975
No 32
>KOG0295|consensus
Probab=99.91 E-value=7.7e-23 Score=122.55 Aligned_cols=131 Identities=22% Similarity=0.383 Sum_probs=115.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccC---------------CcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCC
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATD---------------SYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSG 65 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~ 65 (134)
++++|-+.++++...++.++.++-|++|.|. ++.+.+++.|+.|++||+.++.++ .++.+|...
T Consensus 258 tl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL-~tL~ghdnw 336 (406)
T KOG0295|consen 258 TLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCL-FTLVGHDNW 336 (406)
T ss_pred eEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEE-EEEecccce
Confidence 5899999999888888866777777888764 258999999999999999998765 578999999
Q ss_pred EeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeC
Q psy6446 66 IKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 66 v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~ 132 (134)
|..++|+|.|++|+++..|+++++||+++.++...+. ++.-+.++.|+.+-.++++| -|..+++|.-
T Consensus 337 Vr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 337 VRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred eeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence 9999999999999999999999999999999998887 56778999999999999887 4899999964
No 33
>KOG0302|consensus
Probab=99.91 E-value=9.6e-23 Score=122.77 Aligned_cols=131 Identities=21% Similarity=0.362 Sum_probs=102.6
Q ss_pred eeEeecCCCceee---EEe-eCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCC-CCeEEeCCCCCEeEEEEeeCC
Q psy6446 2 GTVWDAVSGEELH---SFQ-HPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDA-EPTVYRGHSSGIKHVQFFKNN 75 (134)
Q Consensus 2 i~v~d~~~~~~~~---~~~-~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~ 75 (134)
|++|...+|.-.. .+. |...+-. +.|+| ....|++++.||.|+|||++.+.. .....+.|.+.|+.++|+.+.
T Consensus 236 I~lw~~~~g~W~vd~~Pf~gH~~SVED-LqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~ 314 (440)
T KOG0302|consen 236 IHLWEPSTGSWKVDQRPFTGHTKSVED-LQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRRE 314 (440)
T ss_pred eEeeeeccCceeecCccccccccchhh-hccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCc
Confidence 6777777665321 222 4444555 99999 567899999999999999998732 333458899999999999988
Q ss_pred CEEEEeeCCCcEEEEecCC---CceeEEEe-cCCCCeEEEEccCCc-EEE-EecCCeEEEEeCC
Q psy6446 76 TRLISCAEDKTVRLWDVSA---SAEVQKLE-FGAVPNSLEISRDGT-TIT-VTHGSCVTFLDAN 133 (134)
Q Consensus 76 ~~l~~~~~d~~i~~~d~~~---~~~~~~~~-~~~~v~~~~~~~~~~-~l~-~~~~~~i~i~d~~ 133 (134)
.+|++|+.||+++|||+++ ++++..+. |..+|+++.|+|... .++ +|.|.+|.+||+.
T Consensus 315 ~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDls 378 (440)
T KOG0302|consen 315 PLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLS 378 (440)
T ss_pred ceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEee
Confidence 8999999999999999986 45666776 689999999999753 444 4578999999984
No 34
>KOG0283|consensus
Probab=99.90 E-value=2.9e-23 Score=134.43 Aligned_cols=115 Identities=19% Similarity=0.282 Sum_probs=98.1
Q ss_pred eCCCceeeEEEccCCcEEEEecCCCeEEEEECCC--------------------------------C-------------
Q psy6446 18 HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNK--------------------------------P------------- 52 (134)
Q Consensus 18 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~--------------------------------~------------- 52 (134)
.+...+.++.|++||++||+|+.|+.|+||.+.. .
T Consensus 265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~ 344 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQ 344 (712)
T ss_pred ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccC
Confidence 5566777799999999999999999999998754 0
Q ss_pred --------------CCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccC-Cc
Q psy6446 53 --------------DAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRD-GT 117 (134)
Q Consensus 53 --------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~-~~ 117 (134)
..+...+.||.+.|.++.|+. .++|++++.|.++++|++....++..+.|...|+|++|+|. .+
T Consensus 345 s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK-n~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFnPvDDr 423 (712)
T KOG0283|consen 345 SPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK-NNFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFNPVDDR 423 (712)
T ss_pred CccccCCCccccccccchhhhhccchhheeccccc-CCeeEeccccccEEeecCCCcceeeEEecCCeeEEEEecccCCC
Confidence 001124678999999999995 56899999999999999999999999999999999999994 57
Q ss_pred EEEEe-cCCeEEEEeCC
Q psy6446 118 TITVT-HGSCVTFLDAN 133 (134)
Q Consensus 118 ~l~~~-~~~~i~i~d~~ 133 (134)
|+++| -|+.++||++.
T Consensus 424 yFiSGSLD~KvRiWsI~ 440 (712)
T KOG0283|consen 424 YFISGSLDGKVRLWSIS 440 (712)
T ss_pred cEeecccccceEEeecC
Confidence 78776 59999999873
No 35
>KOG0275|consensus
Probab=99.90 E-value=1.7e-24 Score=128.86 Aligned_cols=133 Identities=20% Similarity=0.380 Sum_probs=117.7
Q ss_pred eeEeecCCCceeeEEe--------eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee
Q psy6446 2 GTVWDAVSGEELHSFQ--------HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK 73 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~ 73 (134)
|.+||..+|+..+.++ -....+.|+.|+.|...+++|+.||.|++|.+.++.++.+.-++|...|+++.|+.
T Consensus 237 iEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSr 316 (508)
T KOG0275|consen 237 IEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSR 316 (508)
T ss_pred eeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEcc
Confidence 6799999998766553 12345556999999999999999999999999999988777779999999999999
Q ss_pred CCCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEE-ecCCeEEEEeCCC
Q psy6446 74 NNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITV-THGSCVTFLDANS 134 (134)
Q Consensus 74 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d~~t 134 (134)
|+..+++++.|.++++.-+..|++++.+. |.+.|+...|.++|..+++ ++||+|++|+.+|
T Consensus 317 D~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~Kt 379 (508)
T KOG0275|consen 317 DNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKT 379 (508)
T ss_pred CcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcc
Confidence 99999999999999999999999999887 6788999999999988876 4799999999875
No 36
>KOG0269|consensus
Probab=99.90 E-value=2.1e-23 Score=134.63 Aligned_cols=133 Identities=17% Similarity=0.295 Sum_probs=112.4
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+|++||++..+-..++......+.-+.|+| .+..|+++...|.+.+||++........+.+|.++|.++.|+|++.+|+
T Consensus 157 ~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lA 236 (839)
T KOG0269|consen 157 TVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLA 236 (839)
T ss_pred eEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceee
Confidence 589999998888888875444444499999 7889999999999999999998877777899999999999999999999
Q ss_pred EeeCCCcEEEEecCCCce--eEEEecCCCCeEEEEccCCcE-EEEe---cCCeEEEEeCC
Q psy6446 80 SCAEDKTVRLWDVSASAE--VQKLEFGAVPNSLEISRDGTT-ITVT---HGSCVTFLDAN 133 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~--~~~~~~~~~v~~~~~~~~~~~-l~~~---~~~~i~i~d~~ 133 (134)
||++|+.++|||..+++. ..++....++.+++|-|..++ |+++ .|..|+|||++
T Consensus 237 TGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvr 296 (839)
T KOG0269|consen 237 TGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVR 296 (839)
T ss_pred ecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeec
Confidence 999999999999986654 344456789999999999865 4443 46899999986
No 37
>KOG0273|consensus
Probab=99.90 E-value=1.5e-22 Score=124.71 Aligned_cols=132 Identities=18% Similarity=0.279 Sum_probs=117.6
Q ss_pred CeeEeecCCCceeeEEe-eCCCceeeEEEccCC---------cEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEE
Q psy6446 1 MGTVWDAVSGEELHSFQ-HPHIVKSSVHFATDS---------YRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQ 70 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~ 70 (134)
|++||+.........++ |...+++ +.|+|.| ..+++++.|+.|++||+..+.++ ..+..|+.+|.+++
T Consensus 382 TlkiWs~~~~~~~~~l~~Hskei~t-~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i-~~f~kH~~pVysva 459 (524)
T KOG0273|consen 382 TLKIWSMGQSNSVHDLQAHSKEIYT-IKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPI-HTLMKHQEPVYSVA 459 (524)
T ss_pred eeEeeecCCCcchhhhhhhccceee-EeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCcee-EeeccCCCceEEEE
Confidence 68999988888888887 6667777 9999865 46899999999999999987765 56788999999999
Q ss_pred EeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 71 FFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 71 ~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
|+|+++++++|+.||.|.+|++++++..+.......|..++|+.+|..+.++ +|+.+.+.|++.
T Consensus 460 fS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr~ 524 (524)
T KOG0273|consen 460 FSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQGTGGIFELCWNAAGDKLGACASDGSVCVLDLRK 524 (524)
T ss_pred ecCCCcEEEecCCCCeeEeccccchheeEeecCCCeEEEEEEcCCCCEEEEEecCCCceEEEecC
Confidence 9999999999999999999999999999999888889999999999888876 789999999863
No 38
>KOG0265|consensus
Probab=99.90 E-value=1.3e-22 Score=118.99 Aligned_cols=120 Identities=23% Similarity=0.404 Sum_probs=101.9
Q ss_pred eEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecC
Q psy6446 14 HSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVS 93 (134)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 93 (134)
..+.+++..+..+.|+|+|..|++|+.|..|.+|+.....+-...+++|.+.|..+.|++|+..+++++.|.+++.||.+
T Consensus 41 m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~ 120 (338)
T KOG0265|consen 41 MLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAE 120 (338)
T ss_pred hhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecc
Confidence 34456666666699999999999999999999999776555556788999999999999999999999999999999999
Q ss_pred CCceeEEEe-cCCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 94 ASAEVQKLE-FGAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 94 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
+|++.+.++ +...++.+..+.-|..++++ .|+++++||++
T Consensus 121 tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R 163 (338)
T KOG0265|consen 121 TGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIR 163 (338)
T ss_pred cceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeec
Confidence 999999887 45667777766667777764 46999999997
No 39
>KOG0284|consensus
Probab=99.90 E-value=1.3e-23 Score=127.49 Aligned_cols=132 Identities=17% Similarity=0.233 Sum_probs=116.7
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|+|||....+....+.+++.-+.++.|+|...++++|+.|+.|++||.+++.++. .+.+|+..|..+.|+|++++|++
T Consensus 203 ~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~-tlh~HKntVl~~~f~~n~N~Llt 281 (464)
T KOG0284|consen 203 TIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLA-TLHGHKNTVLAVKFNPNGNWLLT 281 (464)
T ss_pred eEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhh-hhhhccceEEEEEEcCCCCeeEE
Confidence 58999999888888889777777779999999999999999999999999988764 67899999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCc-EEEE-ecCCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGT-TITV-THGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~~-~~~~~i~i~d~~ 133 (134)
++.|..++++|+++.+.++.+. |...+.++.|+|-.. ++++ |.||.|..|.+.
T Consensus 282 ~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~ 337 (464)
T KOG0284|consen 282 GSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVG 337 (464)
T ss_pred ccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEecc
Confidence 9999999999999888888777 788999999999664 4444 478999999763
No 40
>KOG0310|consensus
Probab=99.90 E-value=7.6e-23 Score=126.14 Aligned_cols=131 Identities=23% Similarity=0.335 Sum_probs=112.6
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeC-CCEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKN-NTRLI 79 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~ 79 (134)
|+|||..+...+..++.+...+....|+| ++..|++|+.|+.+++||+.+... ...+.+|...|.+.+++|. +..++
T Consensus 92 V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v-~~~l~~htDYVR~g~~~~~~~hivv 170 (487)
T KOG0310|consen 92 VKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYV-QAELSGHTDYVRCGDISPANDHIVV 170 (487)
T ss_pred EEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEE-EEEecCCcceeEeeccccCCCeEEE
Confidence 68899776666777775556666699999 556778888999999999998653 4567899999999999995 55788
Q ss_pred EeeCCCcEEEEecCCC-ceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 80 SCAEDKTVRLWDVSAS-AEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
+|+.||.|++||++.. ..+..+.|+.+|..+.+-|.|..+++++...|++||+-
T Consensus 171 tGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasAgGn~vkVWDl~ 225 (487)
T KOG0310|consen 171 TGSYDGKVRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASAGGNSVKVWDLT 225 (487)
T ss_pred ecCCCceEEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEcCCCeEEEEEec
Confidence 9999999999999987 78889999999999999999999999999999999985
No 41
>KOG1407|consensus
Probab=99.90 E-value=4.8e-22 Score=114.87 Aligned_cols=132 Identities=17% Similarity=0.276 Sum_probs=112.3
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCC--------------------------
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDA-------------------------- 54 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~-------------------------- 54 (134)
+|++||.+++++...+.....-+. +.|+|+|+++++++.|..|.+.|.++.+.
T Consensus 88 ~ir~wd~r~~k~~~~i~~~~eni~-i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~ 166 (313)
T KOG1407|consen 88 TIRIWDIRSGKCTARIETKGENIN-ITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTN 166 (313)
T ss_pred eEEEEEeccCcEEEEeeccCcceE-EEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEec
Confidence 589999999999999998777888 99999999999999999999998864211
Q ss_pred --------------CCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEE
Q psy6446 55 --------------EPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTI 119 (134)
Q Consensus 55 --------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l 119 (134)
+...+++|.....++.|+|+|+++++|+.|..+.+||+...-+.+.+. ++-+|+.++|+.+|++|
T Consensus 167 GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~l 246 (313)
T KOG1407|consen 167 GLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRML 246 (313)
T ss_pred CCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCccee
Confidence 122456788889999999999999999999999999999888888776 58899999999999999
Q ss_pred EEe-cCCeEEEEeCC
Q psy6446 120 TVT-HGSCVTFLDAN 133 (134)
Q Consensus 120 ~~~-~~~~i~i~d~~ 133 (134)
+++ .|..|-|=+++
T Consensus 247 ASaSEDh~IDIA~ve 261 (313)
T KOG1407|consen 247 ASASEDHFIDIAEVE 261 (313)
T ss_pred eccCccceEEeEecc
Confidence 986 56666554443
No 42
>KOG0296|consensus
Probab=99.90 E-value=1.2e-21 Score=117.45 Aligned_cols=132 Identities=15% Similarity=0.269 Sum_probs=113.0
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEe
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISC 81 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 81 (134)
..+|+..++.....+.+++.-+.++.|+.+|.+|++|..+|.|++|+..++.... .+......+.=+.|+|.+..|+.|
T Consensus 88 AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~-~~~~e~~dieWl~WHp~a~illAG 166 (399)
T KOG0296|consen 88 AFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQW-KLDQEVEDIEWLKWHPRAHILLAG 166 (399)
T ss_pred EEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEE-EeecccCceEEEEecccccEEEee
Confidence 3699999999888888666666669999999999999999999999999876543 344456778899999999999999
Q ss_pred eCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 82 AEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 82 ~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
+.||.+.+|.+.+....+.+. +..++++-.|.|+|+.++++ .||+|++||++|
T Consensus 167 ~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~kt 221 (399)
T KOG0296|consen 167 STDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKT 221 (399)
T ss_pred cCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCC
Confidence 999999999999866555555 67889999999999999987 679999999875
No 43
>KOG0283|consensus
Probab=99.90 E-value=4.4e-22 Score=129.03 Aligned_cols=130 Identities=17% Similarity=0.276 Sum_probs=109.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
||++|++...+++..|.|.+.+.+ ++|+| |.++|++|+.|+.++||++...+ . .....-..-|++++|.|||+..+
T Consensus 391 TVRLWh~~~~~CL~~F~HndfVTc-VaFnPvDDryFiSGSLD~KvRiWsI~d~~-V-v~W~Dl~~lITAvcy~PdGk~av 467 (712)
T KOG0283|consen 391 TVRLWHPGRKECLKVFSHNDFVTC-VAFNPVDDRYFISGSLDGKVRLWSISDKK-V-VDWNDLRDLITAVCYSPDGKGAV 467 (712)
T ss_pred cEEeecCCCcceeeEEecCCeeEE-EEecccCCCcEeecccccceEEeecCcCe-e-EeehhhhhhheeEEeccCCceEE
Confidence 799999999999999999877666 99999 89999999999999999997633 2 23344457899999999999999
Q ss_pred EeeCCCcEEEEecCCCceeEEEec---------CCCCeEEEEccCC--cEEEEecCCeEEEEeCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLEF---------GAVPNSLEISRDG--TTITVTHGSCVTFLDAN 133 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~~---------~~~v~~~~~~~~~--~~l~~~~~~~i~i~d~~ 133 (134)
.|+.+|..++|+....+....... ...|+++.|.|.. +.|+++.|.+|+|||.+
T Consensus 468 IGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~ 532 (712)
T KOG0283|consen 468 IGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGR 532 (712)
T ss_pred EEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEecc
Confidence 999999999999988776655441 2369999999865 37788899999999984
No 44
>KOG0264|consensus
Probab=99.90 E-value=3.8e-22 Score=121.94 Aligned_cols=133 Identities=20% Similarity=0.274 Sum_probs=105.1
Q ss_pred CeeEeecCCCc-------eeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCC-CCCCCeEEeCCCCCEeEEEE
Q psy6446 1 MGTVWDAVSGE-------ELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNK-PDAEPTVYRGHSSGIKHVQF 71 (134)
Q Consensus 1 ~i~v~d~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~-~~~~~~~~~~~~~~v~~~~~ 71 (134)
+|++||+.... +...+.++..++.-++|++ +...|++++.|+.+.|||+++ ..++.....+|.+++.+++|
T Consensus 201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~f 280 (422)
T KOG0264|consen 201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAF 280 (422)
T ss_pred cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEe
Confidence 57899986432 2445566666776699999 667889999999999999996 33445567899999999999
Q ss_pred ee-CCCEEEEeeCCCcEEEEecCCCce-eEEEe-cCCCCeEEEEccCCcEE-EEe-cCCeEEEEeCC
Q psy6446 72 FK-NNTRLISCAEDKTVRLWDVSASAE-VQKLE-FGAVPNSLEISRDGTTI-TVT-HGSCVTFLDAN 133 (134)
Q Consensus 72 ~~-~~~~l~~~~~d~~i~~~d~~~~~~-~~~~~-~~~~v~~~~~~~~~~~l-~~~-~~~~i~i~d~~ 133 (134)
+| ++..|++++.|++|.+||+++.+. +..+. |...|.++.|+|+...+ +++ .|+.+.+||+.
T Consensus 281 np~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls 347 (422)
T KOG0264|consen 281 NPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLS 347 (422)
T ss_pred CCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEecc
Confidence 99 667788999999999999997543 33333 67899999999988554 443 68999999985
No 45
>PTZ00420 coronin; Provisional
Probab=99.90 E-value=3.5e-21 Score=124.79 Aligned_cols=131 Identities=11% Similarity=0.137 Sum_probs=99.8
Q ss_pred CeeEeecCCCc--------eeeEEeeCCCceeeEEEccCCcE-EEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEE
Q psy6446 1 MGTVWDAVSGE--------ELHSFQHPHIVKSSVHFATDSYR-LATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQF 71 (134)
Q Consensus 1 ~i~v~d~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~ 71 (134)
+|++||+.++. ++..+.++...+.+++|+|++.. |++++.|+.|++||++++... ..+. |...|.+++|
T Consensus 98 tIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~-~~i~-~~~~V~Slsw 175 (568)
T PTZ00420 98 TIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRA-FQIN-MPKKLSSLKW 175 (568)
T ss_pred eEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEE-EEEe-cCCcEEEEEE
Confidence 58999997642 33456655566666999998875 578899999999999986543 2333 5678999999
Q ss_pred eeCCCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCe-----EEEEccCCcEEEE-ecC----CeEEEEeCC
Q psy6446 72 FKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPN-----SLEISRDGTTITV-THG----SCVTFLDAN 133 (134)
Q Consensus 72 ~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~-----~~~~~~~~~~l~~-~~~----~~i~i~d~~ 133 (134)
+|+|..|++++.|+.|++||+++++.+..+. |.+.+. ...|++++.++++ |.+ ++|++||++
T Consensus 176 spdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr 248 (568)
T PTZ00420 176 NIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLK 248 (568)
T ss_pred CCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECC
Confidence 9999999999999999999999998887776 333332 2345688887776 444 479999986
No 46
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.90 E-value=2.9e-21 Score=116.11 Aligned_cols=132 Identities=26% Similarity=0.422 Sum_probs=113.3
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
.|.+||+.+++....+..+...+.++.|+|++.++++++.++.+++||++..... ..+..|...+.++.|+|+++.+++
T Consensus 116 ~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~ 194 (289)
T cd00200 116 TIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCV-ATLTGHTGEVNSVAFSPDGEKLLS 194 (289)
T ss_pred eEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccc-eeEecCccccceEEECCCcCEEEE
Confidence 3789999988888888844445556999999889998888999999999875543 456788889999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEE-ecCCCCeEEEEccCCcEEEEec-CCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKL-EFGAVPNSLEISRDGTTITVTH-GSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~ 133 (134)
++.++.+.+||++.++....+ .+...+.++.|+|++.+++++. ++.|.+||++
T Consensus 195 ~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~ 249 (289)
T cd00200 195 SSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLR 249 (289)
T ss_pred ecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcC
Confidence 999999999999988888877 4677899999999988888876 8999999986
No 47
>KOG0282|consensus
Probab=99.90 E-value=1.4e-22 Score=125.02 Aligned_cols=132 Identities=25% Similarity=0.485 Sum_probs=108.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCC-cEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDS-YRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+|++||+++|+++..+....... |+.|+|++ +.+++|+.|+.|+.||+++++ ..+.+..|-+.|..+.|-++++.++
T Consensus 281 ~lKlwDtETG~~~~~f~~~~~~~-cvkf~pd~~n~fl~G~sd~ki~~wDiRs~k-vvqeYd~hLg~i~~i~F~~~g~rFi 358 (503)
T KOG0282|consen 281 FLKLWDTETGQVLSRFHLDKVPT-CVKFHPDNQNIFLVGGSDKKIRQWDIRSGK-VVQEYDRHLGAILDITFVDEGRRFI 358 (503)
T ss_pred eeeeeccccceEEEEEecCCCce-eeecCCCCCcEEEEecCCCcEEEEeccchH-HHHHHHhhhhheeeeEEccCCceEe
Confidence 47899999999999987655444 59999987 889999999999999999976 4567888999999999999999999
Q ss_pred EeeCCCcEEEEecCCCceeEE--------------------------------Ee-----------------cCCCCeEE
Q psy6446 80 SCAEDKTVRLWDVSASAEVQK--------------------------------LE-----------------FGAVPNSL 110 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~--------------------------------~~-----------------~~~~v~~~ 110 (134)
+.+.|+.+++|+.+.+-.+.. +. ..+.-..+
T Consensus 359 ssSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v 438 (503)
T KOG0282|consen 359 SSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQV 438 (503)
T ss_pred eeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeE
Confidence 999999999998765332111 00 01234578
Q ss_pred EEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 111 EISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 111 ~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
.|||||.+|++| ++|.+.+||.+|
T Consensus 439 ~fSpDG~~l~SGdsdG~v~~wdwkt 463 (503)
T KOG0282|consen 439 DFSPDGRTLCSGDSDGKVNFWDWKT 463 (503)
T ss_pred EEcCCCCeEEeecCCccEEEeechh
Confidence 999999999998 689999999864
No 48
>KOG0292|consensus
Probab=99.90 E-value=1e-22 Score=133.73 Aligned_cols=131 Identities=18% Similarity=0.341 Sum_probs=117.9
Q ss_pred CeeEeecCCCceeeEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+|++||.+=+.++..|. |.+++.. +.|+|++.++++|+.|-.|++|+..+..++ ..+.+|-.-|..+.|++...+++
T Consensus 32 ~IQlWDYRM~tli~rFdeHdGpVRg-v~FH~~qplFVSGGDDykIkVWnYk~rrcl-ftL~GHlDYVRt~~FHheyPWIl 109 (1202)
T KOG0292|consen 32 VIQLWDYRMGTLIDRFDEHDGPVRG-VDFHPTQPLFVSGGDDYKIKVWNYKTRRCL-FTLLGHLDYVRTVFFHHEYPWIL 109 (1202)
T ss_pred eeeeehhhhhhHHhhhhccCCccce-eeecCCCCeEEecCCccEEEEEecccceeh-hhhccccceeEEeeccCCCceEE
Confidence 48899999999999998 5555555 999999999999999999999999986655 57889999999999999999999
Q ss_pred EeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+++.|-+|+||+..+++++..+. |...|.|..|+|....++++ -|.+|++||+.
T Consensus 110 SASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDis 165 (1202)
T KOG0292|consen 110 SASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDIS 165 (1202)
T ss_pred EccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeec
Confidence 99999999999999999999987 67889999999988888875 69999999984
No 49
>KOG0269|consensus
Probab=99.89 E-value=5.5e-23 Score=132.76 Aligned_cols=131 Identities=20% Similarity=0.368 Sum_probs=109.3
Q ss_pred eeEeecCC---CceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee-CCC
Q psy6446 2 GTVWDAVS---GEELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK-NNT 76 (134)
Q Consensus 2 i~v~d~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 76 (134)
|.+||+.. .+.+..|..+.+.+.++.|++ ..++|++|+.||.|++||++..+.. ..+.+....|..++|+| .+.
T Consensus 112 i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~-~t~~~nSESiRDV~fsp~~~~ 190 (839)
T KOG0269|consen 112 ISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSK-STFRSNSESIRDVKFSPGYGN 190 (839)
T ss_pred EEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccccc-ccccccchhhhceeeccCCCc
Confidence 78999976 455666776666666699998 6788999999999999999986654 45677888999999999 678
Q ss_pred EEEEeeCCCcEEEEecCCCce-eEEE-ecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 77 RLISCAEDKTVRLWDVSASAE-VQKL-EFGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~-~~~~-~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+++++...|.+++||++.... ...+ .|.++|.|+.|+|++.+|++| .|+.|+|||+.
T Consensus 191 ~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t 250 (839)
T KOG0269|consen 191 KFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMT 250 (839)
T ss_pred eEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEecc
Confidence 899999999999999997643 3333 378999999999999999986 68999999975
No 50
>KOG0281|consensus
Probab=99.89 E-value=3e-23 Score=124.38 Aligned_cols=127 Identities=22% Similarity=0.421 Sum_probs=101.8
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCC--CCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDA--EPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
||+|||+++|+++.++-|+...+--+.|+ ..++++++.|..+.+||+..+.. ....+.+|...|+.++| +.+++
T Consensus 258 TvrvWDv~tge~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdf--d~kyI 333 (499)
T KOG0281|consen 258 TVRVWDVNTGEPLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYI 333 (499)
T ss_pred eEEEEeccCCchhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeecc--ccceE
Confidence 68999999999999887554444338886 56899999999999999987542 22456799999999999 56799
Q ss_pred EEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
++++.|.+|++|++.+++.++++. |...|.|+.+. ++++++| +|.+|++||++
T Consensus 334 VsASgDRTikvW~~st~efvRtl~gHkRGIAClQYr--~rlvVSGSSDntIRlwdi~ 388 (499)
T KOG0281|consen 334 VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE 388 (499)
T ss_pred EEecCCceEEEEeccceeeehhhhcccccceehhcc--CeEEEecCCCceEEEEecc
Confidence 999999999999999999888876 56667777654 6777776 57888888875
No 51
>KOG0277|consensus
Probab=99.89 E-value=2.4e-22 Score=115.75 Aligned_cols=132 Identities=20% Similarity=0.306 Sum_probs=110.8
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee-CCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK-NNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l 78 (134)
||++||..-++-+.++.++...+-...|+| .++.++++|.|+.+++||++...... .+..|..++.++.|+. +.+.+
T Consensus 128 TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~-~i~ah~~Eil~cdw~ky~~~vl 206 (311)
T KOG0277|consen 128 TIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFM-SIEAHNSEILCCDWSKYNHNVL 206 (311)
T ss_pred ceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCcee-EEEeccceeEeecccccCCcEE
Confidence 689999999999999997766665599999 78899999999999999999876554 4788999999999998 77888
Q ss_pred EEeeCCCcEEEEecCCCc-eeEEEe-cCCCCeEEEEccCCc-EEEE-ecCCeEEEEeCC
Q psy6446 79 ISCAEDKTVRLWDVSASA-EVQKLE-FGAVPNSLEISRDGT-TITV-THGSCVTFLDAN 133 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~-~~~~~~-~~~~v~~~~~~~~~~-~l~~-~~~~~i~i~d~~ 133 (134)
+|++.|+.|+.||+++-+ ++..+. ++-.|+.++|+|... .|++ +.|-++++||.+
T Consensus 207 ~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~ 265 (311)
T KOG0277|consen 207 ATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPE 265 (311)
T ss_pred EecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccc
Confidence 999999999999998754 344443 567899999999875 4444 368999999975
No 52
>KOG0294|consensus
Probab=99.89 E-value=1e-21 Score=115.98 Aligned_cols=132 Identities=14% Similarity=0.215 Sum_probs=115.2
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCc--EEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSY--RLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
+|+|||+++.+.+..+-.+...++++.|.++.. .|++|+.||.|.+|+..... ....+++|.+.|+.++.+|.++..
T Consensus 64 tI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~-~~~slK~H~~~Vt~lsiHPS~KLA 142 (362)
T KOG0294|consen 64 TIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWE-LLKSLKAHKGQVTDLSIHPSGKLA 142 (362)
T ss_pred cEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeE-EeeeecccccccceeEecCCCceE
Confidence 689999999998888876677777799998665 89999999999999998864 456789999999999999999999
Q ss_pred EEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
++.+.|+.+++||+-.|+.-..+........+.|+|.|.+++.+....|-+|.++
T Consensus 143 LsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~~i~i~q~d 197 (362)
T KOG0294|consen 143 LSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRNKIDIYQLD 197 (362)
T ss_pred EEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEeccEEEEEecc
Confidence 9999999999999999998887777766677999999988888777788888764
No 53
>KOG0313|consensus
Probab=99.89 E-value=2.9e-22 Score=120.64 Aligned_cols=130 Identities=22% Similarity=0.363 Sum_probs=109.9
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCC--CCCeEEeCCCCCEeEEEEee-CCCE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPD--AEPTVYRGHSSGIKHVQFFK-NNTR 77 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~--~~~~~~~~~~~~v~~~~~~~-~~~~ 77 (134)
||+.||+.++..+..+.......+ +..+|..++|++|+.|..+++||.+++. .....+.+|.+.|.++.|+| +...
T Consensus 282 TIk~WDletg~~~~~~~~~ksl~~-i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~ 360 (423)
T KOG0313|consen 282 TIKVWDLETGGLKSTLTTNKSLNC-ISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQ 360 (423)
T ss_pred eEEEEEeecccceeeeecCcceeE-eecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceE
Confidence 689999999999988887766655 9999999999999999999999999864 34456789999999999999 5566
Q ss_pred EEEeeCCCcEEEEecCCCc-eeEEEe-cCCCCeEEEEccCCcEEEE-ecCCeEEEEeC
Q psy6446 78 LISCAEDKTVRLWDVSASA-EVQKLE-FGAVPNSLEISRDGTTITV-THGSCVTFLDA 132 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~~~~-~~~~~~-~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d~ 132 (134)
|++++.|+++++||+++.+ ++..+. |...|.++.|... ..+++ |.|.+|+++..
T Consensus 361 ~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~~-~~IvSGGaD~~l~i~~~ 417 (423)
T KOG0313|consen 361 LVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNEG-GLIVSGGADNKLRIFKG 417 (423)
T ss_pred EEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccCC-ceEEeccCcceEEEecc
Confidence 8899999999999999877 777665 6788999999855 45555 57999999864
No 54
>KOG0285|consensus
Probab=99.89 E-value=1.5e-22 Score=121.50 Aligned_cols=131 Identities=18% Similarity=0.291 Sum_probs=115.9
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|+-||++..+.++.+.++-..+.|++.+|.-..|++|+.|..+++||+++... ...+.+|...|.++.+.|-...+++
T Consensus 216 ~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~-V~~l~GH~~~V~~V~~~~~dpqvit 294 (460)
T KOG0285|consen 216 QVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRAS-VHVLSGHTNPVASVMCQPTDPQVIT 294 (460)
T ss_pred eeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccce-EEEecCCCCcceeEEeecCCCceEE
Confidence 478899999999999986666666699999999999999999999999999654 4678999999999999998888999
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEecCCeEEEEeC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~ 132 (134)
++.|++|++||++.++....+. +...+++++.+|....+++++...|+-|++
T Consensus 295 ~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dnik~w~~ 347 (460)
T KOG0285|consen 295 GSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDNIKQWKL 347 (460)
T ss_pred ecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCccceeccC
Confidence 9999999999999999888777 467899999999988888877778888876
No 55
>KOG0277|consensus
Probab=99.89 E-value=4.3e-22 Score=114.77 Aligned_cols=132 Identities=24% Similarity=0.360 Sum_probs=106.6
Q ss_pred CeeEeecC-CCceeeEEe-eCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee-CCC
Q psy6446 1 MGTVWDAV-SGEELHSFQ-HPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK-NNT 76 (134)
Q Consensus 1 ~i~v~d~~-~~~~~~~~~-~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 76 (134)
++++||+. ..+++..++ |...+.+ +.|++ +...++++|-|++|++|+..-+.. ..++.+|..-|.+..|+| ..+
T Consensus 84 SLrl~d~~~~s~Pi~~~kEH~~EV~S-vdwn~~~r~~~ltsSWD~TiKLW~~~r~~S-v~Tf~gh~~~Iy~a~~sp~~~n 161 (311)
T KOG0277|consen 84 SLRLFDLTMPSKPIHKFKEHKREVYS-VDWNTVRRRIFLTSSWDGTIKLWDPNRPNS-VQTFNGHNSCIYQAAFSPHIPN 161 (311)
T ss_pred eEEEeccCCCCcchhHHHhhhhheEE-eccccccceeEEeeccCCceEeecCCCCcc-eEeecCCccEEEEEecCCCCCC
Confidence 57899965 446788888 5555555 99999 677788899999999999987554 467999999999999999 678
Q ss_pred EEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEE-EEe-cCCeEEEEeCCC
Q psy6446 77 RLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTI-TVT-HGSCVTFLDANS 134 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l-~~~-~~~~i~i~d~~t 134 (134)
.+++++.|+.+++||++.......+. +..++.++.|+.-...+ +++ .|+.|+.||+++
T Consensus 162 lfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~ 222 (311)
T KOG0277|consen 162 LFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRN 222 (311)
T ss_pred eEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhh
Confidence 89999999999999998643333344 66799999999876554 454 589999999874
No 56
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.89 E-value=1.1e-20 Score=113.55 Aligned_cols=132 Identities=30% Similarity=0.448 Sum_probs=112.9
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
.+++||+.+++....+..+...+..+.|+|+++.+++++.++.+++|++..... ...+..|...+.++.|+|+++.+++
T Consensus 32 ~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~ 110 (289)
T cd00200 32 TIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGEC-VRTLTGHTSYVSSVAFSPDGRILSS 110 (289)
T ss_pred EEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccc-eEEEeccCCcEEEEEEcCCCCEEEE
Confidence 378999998888777775555554599999999999999999999999987543 4566788889999999999888888
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEec-CCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVTH-GSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~ 133 (134)
++.++.+.+||+.+++....+. +...+.+++|+|++.+++++. ++.|.+||++
T Consensus 111 ~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~ 165 (289)
T cd00200 111 SSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLR 165 (289)
T ss_pred ecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEcc
Confidence 8889999999999888777776 567899999999999988886 8999999985
No 57
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.89 E-value=9.1e-21 Score=128.50 Aligned_cols=131 Identities=24% Similarity=0.396 Sum_probs=108.5
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEc-cCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFA-TDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+|++||+.++..+..+.+...+. ++.|+ +++..|++|+.||.|++||++........+.+|...|..+.|. ++..++
T Consensus 599 ~v~iWd~~~~~~~~~~~~~~~v~-~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lv 676 (793)
T PLN00181 599 SVKLWSINQGVSIGTIKTKANIC-CVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLV 676 (793)
T ss_pred EEEEEECCCCcEEEEEecCCCeE-EEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEE
Confidence 48999999999988888655444 48885 4799999999999999999987654455678899999999997 788999
Q ss_pred EeeCCCcEEEEecCCC------ceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 80 SCAEDKTVRLWDVSAS------AEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~------~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+++.|+.|++||++.+ ..+..+. +...+..++|+|++.+++++ .|+.|++|+..
T Consensus 677 s~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~ 738 (793)
T PLN00181 677 SSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKA 738 (793)
T ss_pred EEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECC
Confidence 9999999999999743 3444444 46678899999999999986 68999999963
No 58
>KOG0316|consensus
Probab=99.89 E-value=1.7e-21 Score=111.38 Aligned_cols=129 Identities=22% Similarity=0.386 Sum_probs=110.9
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCC-CCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPD-AEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+.+||+.+|+.++.+.++...+++++|+.+...+++|+.|..+++||-+... .+.+.+......|.++..+ +..+++
T Consensus 83 v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heIva 160 (307)
T KOG0316|consen 83 VQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEIVA 160 (307)
T ss_pred EEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEEEe
Confidence 6899999999999999777777779999999999999999999999988743 4556677778889998884 678999
Q ss_pred eeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
|+.||+++.||++.|+..... ...+|++++|+++++..+++ -++++++.|-+
T Consensus 161 GS~DGtvRtydiR~G~l~sDy-~g~pit~vs~s~d~nc~La~~l~stlrLlDk~ 213 (307)
T KOG0316|consen 161 GSVDGTVRTYDIRKGTLSSDY-FGHPITSVSFSKDGNCSLASSLDSTLRLLDKE 213 (307)
T ss_pred eccCCcEEEEEeecceeehhh-cCCcceeEEecCCCCEEEEeeccceeeecccc
Confidence 999999999999988765432 47899999999999987765 78999998854
No 59
>KOG0292|consensus
Probab=99.89 E-value=9.1e-22 Score=129.37 Aligned_cols=133 Identities=16% Similarity=0.270 Sum_probs=110.9
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCC---------------------------
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPD--------------------------- 53 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~--------------------------- 53 (134)
||+||++++++++..+.+++..+-|..|+|....++++|.|.+|++||+..-.
T Consensus 116 TIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~D 195 (1202)
T KOG0292|consen 116 TIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTD 195 (1202)
T ss_pred eEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcC
Confidence 79999999999999999777777779999999999999999999999985210
Q ss_pred -CCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCcee--EEE-ecCCCCeEEEEccCCcEEEE-ecCCeEE
Q psy6446 54 -AEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEV--QKL-EFGAVPNSLEISRDGTTITV-THGSCVT 128 (134)
Q Consensus 54 -~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~--~~~-~~~~~v~~~~~~~~~~~l~~-~~~~~i~ 128 (134)
.....+.+|...|+-++|+|.-..+++|+.|+.|++|.+...+.- .+. .|.+.|.++-|+|....+++ +.|+.|+
T Consensus 196 aVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksir 275 (1202)
T KOG0292|consen 196 AVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIR 275 (1202)
T ss_pred eeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEE
Confidence 011246789999999999999999999999999999988654321 122 26788999999999988887 5789999
Q ss_pred EEeCC
Q psy6446 129 FLDAN 133 (134)
Q Consensus 129 i~d~~ 133 (134)
+||+.
T Consensus 276 VwDm~ 280 (1202)
T KOG0292|consen 276 VWDMT 280 (1202)
T ss_pred EEecc
Confidence 99986
No 60
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.89 E-value=5.2e-21 Score=129.66 Aligned_cols=130 Identities=17% Similarity=0.297 Sum_probs=104.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee-CCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK-NNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l 78 (134)
+|++||+.+++.+..+..+...+.+++|+| ++.+|++|+.|+.|++||++++... ..+.. ...+.++.|++ ++..+
T Consensus 556 ~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~-~~~~~-~~~v~~v~~~~~~g~~l 633 (793)
T PLN00181 556 VVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSI-GTIKT-KANICCVQFPSESGRSL 633 (793)
T ss_pred eEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEE-EEEec-CCCeEEEEEeCCCCCEE
Confidence 489999999999988885555566699997 7899999999999999999876543 34443 36789999964 78999
Q ss_pred EEeeCCCcEEEEecCCCc-eeEEEe-cCCCCeEEEEccCCcEEEE-ecCCeEEEEeCC
Q psy6446 79 ISCAEDKTVRLWDVSASA-EVQKLE-FGAVPNSLEISRDGTTITV-THGSCVTFLDAN 133 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~-~~~~~~-~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d~~ 133 (134)
++|+.|+.|++||+++.+ ....+. +...|.++.|. ++.++++ +.|+.|++||++
T Consensus 634 atgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~ 690 (793)
T PLN00181 634 AFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLS 690 (793)
T ss_pred EEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCC
Confidence 999999999999998765 333333 66789999997 5556655 578999999985
No 61
>KOG0289|consensus
Probab=99.89 E-value=3.3e-21 Score=117.99 Aligned_cols=128 Identities=24% Similarity=0.424 Sum_probs=108.0
Q ss_pred eEeecCCCceeeEEeeC--CCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 3 TVWDAVSGEELHSFQHP--HIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 3 ~v~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
...|.+++..+....+. .-.+++.+|+|||..|.+|..|+.+++||+..+... ..+.+|.++|..++|+.+|-+|++
T Consensus 328 ~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~-a~Fpght~~vk~i~FsENGY~Lat 406 (506)
T KOG0289|consen 328 AFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNV-AKFPGHTGPVKAISFSENGYWLAT 406 (506)
T ss_pred EEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCcccc-ccCCCCCCceeEEEeccCceEEEE
Confidence 45678888887777653 344667999999999999999999999999987744 568899999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEecC--CCCeEEEEccCCcEEEEe-cCCeEEEEe
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLEFG--AVPNSLEISRDGTTITVT-HGSCVTFLD 131 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~-~~~~i~i~d 131 (134)
+..|+.|++||++..+...++... .++.++.|++.|.+|+++ .+=.|++++
T Consensus 407 ~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~ 460 (506)
T KOG0289|consen 407 AADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICK 460 (506)
T ss_pred EecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEe
Confidence 999999999999998888887754 469999999999999886 345565554
No 62
>KOG0289|consensus
Probab=99.89 E-value=1.6e-21 Score=119.38 Aligned_cols=133 Identities=17% Similarity=0.257 Sum_probs=109.9
Q ss_pred CeeEeecCCCceeeEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEe-CCCCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYR-GHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l 78 (134)
.|+||............ |...+.. +..+|.|.+|++++.|+...+.|++++........ ...-.+++.+|+|||..+
T Consensus 284 ~i~vws~~~~s~~~~~~~h~~~V~~-ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLif 362 (506)
T KOG0289|consen 284 IIRVWSVPLSSEPTSSRPHEEPVTG-LSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIF 362 (506)
T ss_pred eEEeeccccccCcccccccccccee-eeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEE
Confidence 37889887666655555 5555555 99999999999999999999999998765533222 123458999999999999
Q ss_pred EEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
.+|..|+.+++||+..+.....++ |.++|..++|+.+|.+|+++ .|+.|++||++.
T Consensus 363 gtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRK 420 (506)
T KOG0289|consen 363 GTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRK 420 (506)
T ss_pred eccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehh
Confidence 999999999999999988887777 68899999999999999986 668899999973
No 63
>KOG0268|consensus
Probab=99.88 E-value=9.9e-23 Score=122.26 Aligned_cols=132 Identities=16% Similarity=0.238 Sum_probs=115.0
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|.+||++.+.+++.+-..-.... ++|+|++-.+.+|+.|..++.+|++....+.....+|.+.|.+++|+|.|+.+++
T Consensus 211 sIvLyD~R~~~Pl~KVi~~mRTN~-IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~Efvs 289 (433)
T KOG0268|consen 211 SIVLYDLRQASPLKKVILTMRTNT-ICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVS 289 (433)
T ss_pred ceEEEecccCCccceeeeeccccc-eecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhcc
Confidence 578999999999988876555555 9999988889999999999999999988888889999999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEec--CCCCeEEEEccCCcEEEEec-CCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLEF--GAVPNSLEISRDGTTITVTH-GSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~ 133 (134)
|+.|.+|+||....+........ -..|.|++|+.|.+++++|+ |+.|++|-.+
T Consensus 290 gsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~ 345 (433)
T KOG0268|consen 290 GSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAK 345 (433)
T ss_pred ccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecc
Confidence 99999999999987765444332 35789999999999999986 5999999653
No 64
>KOG0318|consensus
Probab=99.88 E-value=1.1e-20 Score=118.10 Aligned_cols=120 Identities=25% Similarity=0.392 Sum_probs=99.0
Q ss_pred eeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEe---CCCCCEeEEEEeeCCCEEEEeeCCCcEEE
Q psy6446 13 LHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYR---GHSSGIKHVQFFKNNTRLISCAEDKTVRL 89 (134)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 89 (134)
...++.+...+.|+.|+|||.++++.+.||.+.+||=.+++.. ..+. +|.+.|.+++|+||++.+++++.|.++++
T Consensus 183 k~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~v-g~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KI 261 (603)
T KOG0318|consen 183 KSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKV-GELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKI 261 (603)
T ss_pred eecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEE-EEecCCCCccccEEEEEECCCCceEEEecCCceEEE
Confidence 3344555567778999999999999999999999998887644 3344 89999999999999999999999999999
Q ss_pred EecCCCceeEEEe--------------------------------------------cCCCCeEEEEccCCcEEEEe-cC
Q psy6446 90 WDVSASAEVQKLE--------------------------------------------FGAVPNSLEISRDGTTITVT-HG 124 (134)
Q Consensus 90 ~d~~~~~~~~~~~--------------------------------------------~~~~v~~~~~~~~~~~l~~~-~~ 124 (134)
||..+.++.+++. |...|+++..+|++.++.++ .|
T Consensus 262 WdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyD 341 (603)
T KOG0318|consen 262 WDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYD 341 (603)
T ss_pred EEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccC
Confidence 9998876654443 12267889999999988876 68
Q ss_pred CeEEEEeCC
Q psy6446 125 SCVTFLDAN 133 (134)
Q Consensus 125 ~~i~i~d~~ 133 (134)
|.|.-||..
T Consensus 342 G~I~~W~~~ 350 (603)
T KOG0318|consen 342 GHINSWDSG 350 (603)
T ss_pred ceEEEEecC
Confidence 999999875
No 65
>KOG0645|consensus
Probab=99.88 E-value=1.1e-20 Score=109.66 Aligned_cols=131 Identities=22% Similarity=0.352 Sum_probs=107.8
Q ss_pred eeEeecCCC--ceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCC--CCeEEeCCCCCEeEEEEeeCCCE
Q psy6446 2 GTVWDAVSG--EELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDA--EPTVYRGHSSGIKHVQFFKNNTR 77 (134)
Q Consensus 2 i~v~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~ 77 (134)
+.||.-..+ +++..+++++..+.|++|+++|++||++++|..|-+|.+..... ....+.+|...|..+.|+|....
T Consensus 85 ~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dl 164 (312)
T KOG0645|consen 85 VVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDL 164 (312)
T ss_pred EEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcce
Confidence 456654433 57888997777777799999999999999999999999986442 34567899999999999999999
Q ss_pred EEEeeCCCcEEEEecC---CCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeC
Q psy6446 78 LISCAEDKTVRLWDVS---ASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~---~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~ 132 (134)
|++++.|++|++|+-. ...+.+++. +...+.+++|+|.|..|+++ .|++++||-.
T Consensus 165 L~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~ 224 (312)
T KOG0645|consen 165 LFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRL 224 (312)
T ss_pred eEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeee
Confidence 9999999999999866 234566665 45689999999999888876 5799999963
No 66
>KOG0265|consensus
Probab=99.88 E-value=2.5e-21 Score=113.68 Aligned_cols=131 Identities=19% Similarity=0.365 Sum_probs=111.8
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCC-cEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDS-YRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+++.||+++|+.++.++.+...++++..+.-| .++.+++.|+++++||+++.... ..+ ..+-+++++.|..++..+.
T Consensus 113 ~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~-~t~-~~kyqltAv~f~d~s~qv~ 190 (338)
T KOG0265|consen 113 TVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAI-KTF-ENKYQLTAVGFKDTSDQVI 190 (338)
T ss_pred eEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchh-hcc-ccceeEEEEEeccccccee
Confidence 58999999999999999888888877755544 56678899999999999986544 232 3456899999999999999
Q ss_pred EeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEE-ecCCeEEEEeCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITV-THGSCVTFLDAN 133 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d~~ 133 (134)
+|+-|+.|++||++.......+. +...|..+..+|+|.++.+ +.|.++++||++
T Consensus 191 sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~r 246 (338)
T KOG0265|consen 191 SGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVR 246 (338)
T ss_pred eccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEec
Confidence 99999999999999998888887 6789999999999999887 479999999986
No 67
>KOG1446|consensus
Probab=99.88 E-value=4.7e-20 Score=108.76 Aligned_cols=132 Identities=11% Similarity=0.160 Sum_probs=106.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCC-CCCCeEEe---CCCCCEeEEEEeeCCC
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKP-DAEPTVYR---GHSSGIKHVQFFKNNT 76 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~-~~~~~~~~---~~~~~v~~~~~~~~~~ 76 (134)
+|++||++..++...+.-....+ ++|+|+|-.+|++.....|++||++.- +.+...+. +...+.+.+.|+|||+
T Consensus 123 tvrLWDlR~~~cqg~l~~~~~pi--~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK 200 (311)
T KOG1446|consen 123 TVRLWDLRVKKCQGLLNLSGRPI--AAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGK 200 (311)
T ss_pred eEEeeEecCCCCceEEecCCCcc--eeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCC
Confidence 68999999888877776444433 889999999999988889999999874 33333333 3356789999999999
Q ss_pred EEEEeeCCCcEEEEecCCCceeEEEecC---C-CCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 77 RLISCAEDKTVRLWDVSASAEVQKLEFG---A-VPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~---~-~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
.++.+...+.+.+.|--+|..+..+... . .....+|.||++++++| .||+|++|++++
T Consensus 201 ~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~t 263 (311)
T KOG1446|consen 201 SILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLET 263 (311)
T ss_pred EEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCC
Confidence 9999999999999999999988777632 2 22578899999999998 469999999874
No 68
>KOG0278|consensus
Probab=99.88 E-value=9.1e-21 Score=109.36 Aligned_cols=129 Identities=15% Similarity=0.251 Sum_probs=109.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+||+||.+++..++.++....+.+ +..+++|.+|.++. .+.|.+||..+-..+ ..+ .-...|.+...+|+...+++
T Consensus 166 tVRLWD~rTgt~v~sL~~~s~VtS-lEvs~dG~ilTia~-gssV~Fwdaksf~~l-Ks~-k~P~nV~SASL~P~k~~fVa 241 (334)
T KOG0278|consen 166 TVRLWDHRTGTEVQSLEFNSPVTS-LEVSQDGRILTIAY-GSSVKFWDAKSFGLL-KSY-KMPCNVESASLHPKKEFFVA 241 (334)
T ss_pred ceEEEEeccCcEEEEEecCCCCcc-eeeccCCCEEEEec-CceeEEeccccccce-eec-cCccccccccccCCCceEEe
Confidence 689999999999999998888877 99999998776654 468999999875533 222 24567899999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEE--ecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKL--EFGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
|++|..++.||..++..+..+ .+.++|.|+.|+|+|...++| .||+|++|.+.
T Consensus 242 Gged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~ 297 (334)
T KOG0278|consen 242 GGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTT 297 (334)
T ss_pred cCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEec
Confidence 999999999999999988775 367999999999999998887 68999999864
No 69
>KOG0267|consensus
Probab=99.88 E-value=8.7e-23 Score=131.20 Aligned_cols=132 Identities=22% Similarity=0.376 Sum_probs=117.2
Q ss_pred CeeEeecCCCceeeEEee-CCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQH-PHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+|++||+..++.++++.+ ...+.. +.|+|.+.+.+.|+.|..+++||.+...+. ..+.+|...+..+.|+|+|++++
T Consensus 93 tiK~wDleeAk~vrtLtgh~~~~~s-v~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~-~~~~s~~~vv~~l~lsP~Gr~v~ 170 (825)
T KOG0267|consen 93 TIKVWDLEEAKIVRTLTGHLLNITS-VDFHPYGEFFASGSTDTDLKIWDIRKKGCS-HTYKSHTRVVDVLRLSPDGRWVA 170 (825)
T ss_pred ceeeeehhhhhhhhhhhccccCcce-eeeccceEEeccccccccceehhhhccCce-eeecCCcceeEEEeecCCCceee
Confidence 689999999999998884 445555 999999999999999999999999965544 56888999999999999999999
Q ss_pred EeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
.++.|..+++||...|+....+. +...+..+.|+|..-+++.| .|+++++||++|
T Consensus 171 ~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dlet 227 (825)
T KOG0267|consen 171 SGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLET 227 (825)
T ss_pred ccCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccce
Confidence 99999999999999999998888 78889999999998777765 689999999974
No 70
>KOG1446|consensus
Probab=99.87 E-value=3.3e-20 Score=109.42 Aligned_cols=132 Identities=20% Similarity=0.345 Sum_probs=113.5
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecC--CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSN--DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
++++||..+++.++++..++..+..+.|....+.++.++. |..|+..++.+.+.+ +-+.||...|..++.+|-+..+
T Consensus 37 sl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkyl-RYF~GH~~~V~sL~~sP~~d~F 115 (311)
T KOG1446|consen 37 SLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYL-RYFPGHKKRVNSLSVSPKDDTF 115 (311)
T ss_pred eEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceE-EEcCCCCceEEEEEecCCCCeE
Confidence 5899999999999999988777777889887778877776 889999999986654 6789999999999999988999
Q ss_pred EEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecC-CeEEEEeCCC
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHG-SCVTFLDANS 134 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~i~i~d~~t 134 (134)
++++.|++|++||++..++.-.+.... -...+|+|+|-+++++.+ ..|++||+++
T Consensus 116 lS~S~D~tvrLWDlR~~~cqg~l~~~~-~pi~AfDp~GLifA~~~~~~~IkLyD~Rs 171 (311)
T KOG1446|consen 116 LSSSLDKTVRLWDLRVKKCQGLLNLSG-RPIAAFDPEGLIFALANGSELIKLYDLRS 171 (311)
T ss_pred EecccCCeEEeeEecCCCCceEEecCC-CcceeECCCCcEEEEecCCCeEEEEEecc
Confidence 999999999999999888877665443 346889999999998754 5999999874
No 71
>KOG0316|consensus
Probab=99.87 E-value=7.7e-21 Score=108.77 Aligned_cols=121 Identities=20% Similarity=0.375 Sum_probs=108.4
Q ss_pred eeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEec
Q psy6446 13 LHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDV 92 (134)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 92 (134)
+..+......+.++.|+-+|++.++++.|..+++|+...+. ...++.+|..+|..++.+.|...+++++.|..+.+||.
T Consensus 10 ~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~-liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV 88 (307)
T KOG0316|consen 10 LSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGA-LIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDV 88 (307)
T ss_pred ceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccc-eeeeecCCCceeeeccccccccccccCCCCceEEEEEc
Confidence 45566666667779999999999999999999999988765 45789999999999999999999999999999999999
Q ss_pred CCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 93 SASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 93 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
.+|+..+.+. |..+|+.++|+.+...++++ .|..+++||.++
T Consensus 89 ~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS 132 (307)
T KOG0316|consen 89 NTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRS 132 (307)
T ss_pred ccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEccc
Confidence 9999999998 67899999999999888886 699999999864
No 72
>KOG0772|consensus
Probab=99.87 E-value=2.7e-21 Score=120.70 Aligned_cols=134 Identities=19% Similarity=0.284 Sum_probs=101.6
Q ss_pred CeeEeecCCCc-eeeEEe-----eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCC--CCCeEEeCCCC--CEeEEE
Q psy6446 1 MGTVWDAVSGE-ELHSFQ-----HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPD--AEPTVYRGHSS--GIKHVQ 70 (134)
Q Consensus 1 ~i~v~d~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~--~~~~~~~~~~~--~v~~~~ 70 (134)
|+||||+...+ .+..++ +.....+.++|+++|+.||+|+.||.|.+|+..... .......+|.. .|+++.
T Consensus 292 tlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~ 371 (641)
T KOG0772|consen 292 TLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSIS 371 (641)
T ss_pred cEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEE
Confidence 68999997544 344444 222334559999999999999999999999976532 12233457776 899999
Q ss_pred EeeCCCEEEEeeCCCcEEEEecCCCceeEEEe----cCCCCeEEEEccCCcEEEEec-------CCeEEEEeCCC
Q psy6446 71 FFKNNTRLISCAEDKTVRLWDVSASAEVQKLE----FGAVPNSLEISRDGTTITVTH-------GSCVTFLDANS 134 (134)
Q Consensus 71 ~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~-------~~~i~i~d~~t 134 (134)
|+++|++|++-+.|+++++||+++.+...... ...+-..++|+|+.++|++|. .|.+.+||..|
T Consensus 372 FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t 446 (641)
T KOG0772|consen 372 FSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMT 446 (641)
T ss_pred eccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccc
Confidence 99999999999999999999999865433222 345667899999999998762 26899988653
No 73
>KOG0647|consensus
Probab=99.87 E-value=1.1e-20 Score=111.25 Aligned_cols=117 Identities=21% Similarity=0.326 Sum_probs=99.7
Q ss_pred eCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCC-CCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCC
Q psy6446 18 HPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKP-DAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSAS 95 (134)
Q Consensus 18 ~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 95 (134)
.++..+++++||| ...+++++|.||.||+|+++.. .........|.++|.+++|+.+|..+++++.|+.+++||+.++
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~ 104 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG 104 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC
Confidence 5566677799999 6667779999999999999873 3333455679999999999999999999999999999999999
Q ss_pred ceeEEEecCCCCeEEEEccCCc--EEEEe-cCCeEEEEeCCC
Q psy6446 96 AEVQKLEFGAVPNSLEISRDGT--TITVT-HGSCVTFLDANS 134 (134)
Q Consensus 96 ~~~~~~~~~~~v~~~~~~~~~~--~l~~~-~~~~i~i~d~~t 134 (134)
+....-.|..+|.++.|-+... .|++| .|.+|+.||++.
T Consensus 105 Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~ 146 (347)
T KOG0647|consen 105 QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRS 146 (347)
T ss_pred CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCC
Confidence 8887777999999999987665 67776 589999999874
No 74
>KOG0274|consensus
Probab=99.86 E-value=4.5e-20 Score=119.22 Aligned_cols=128 Identities=23% Similarity=0.420 Sum_probs=109.5
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
|+++||..+|++...+.++...+.++.. ....+.+|+.|.+|++|++.++..+ ..+.+|.++|.++..+ +..+++
T Consensus 272 t~rvWd~~sg~C~~~l~gh~stv~~~~~--~~~~~~sgs~D~tVkVW~v~n~~~l-~l~~~h~~~V~~v~~~--~~~lvs 346 (537)
T KOG0274|consen 272 TERVWDCSTGECTHSLQGHTSSVRCLTI--DPFLLVSGSRDNTVKVWDVTNGACL-NLLRGHTGPVNCVQLD--EPLLVS 346 (537)
T ss_pred cEEeEecCCCcEEEEecCCCceEEEEEc--cCceEeeccCCceEEEEeccCcceE-EEeccccccEEEEEec--CCEEEE
Confidence 6899999999999999977777665655 4567888999999999999986654 5677799999999996 889999
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEE-ecCCeEEEEeCCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITV-THGSCVTFLDANS 134 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d~~t 134 (134)
|+.|++|++||+.+++++..+. |...|.++.+.+. ..++. +.|+.|++||+++
T Consensus 347 gs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~ 401 (537)
T KOG0274|consen 347 GSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRT 401 (537)
T ss_pred EecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCc
Confidence 9999999999999999999887 6788999988876 45554 5799999999874
No 75
>KOG0305|consensus
Probab=99.86 E-value=5.7e-21 Score=120.50 Aligned_cols=132 Identities=17% Similarity=0.277 Sum_probs=113.1
Q ss_pred CeeEeecCCCceeeEEee-CCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQH-PHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+|.|||..+.+.+..+.+ +..-+.+++|+ +..+.+|+.|+.|..+|++........+.+|...|+.++|++|+++++
T Consensus 240 ~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lA 317 (484)
T KOG0305|consen 240 TVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLA 317 (484)
T ss_pred eEEEEehhhccccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeec
Confidence 478999999988888885 77777779997 778999999999999999987766555789999999999999999999
Q ss_pred EeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCC-cEEEEe---cCCeEEEEeCCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDG-TTITVT---HGSCVTFLDANS 134 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~-~~l~~~---~~~~i~i~d~~t 134 (134)
+|+.|+.+.|||.....++..+. |...|..++|+|-. ..|++| .|+.|++||+.+
T Consensus 318 SGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~ 377 (484)
T KOG0305|consen 318 SGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNT 377 (484)
T ss_pred cCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCC
Confidence 99999999999997766666554 78999999999976 466664 379999999863
No 76
>KOG1407|consensus
Probab=99.86 E-value=4.3e-20 Score=106.92 Aligned_cols=130 Identities=17% Similarity=0.251 Sum_probs=110.1
Q ss_pred eeEeecCCCceeeEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 2 GTVWDAVSGEELHSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
|.|....+-+++..++ |+...++ +.|+|+|++|++|+.|-.+.+||++..-+. +.+.-+.-+|..+.|+.+|++|++
T Consensus 171 v~ILsypsLkpv~si~AH~snCic-I~f~p~GryfA~GsADAlvSLWD~~ELiC~-R~isRldwpVRTlSFS~dg~~lAS 248 (313)
T KOG1407|consen 171 VEILSYPSLKPVQSIKAHPSNCIC-IEFDPDGRYFATGSADALVSLWDVDELICE-RCISRLDWPVRTLSFSHDGRMLAS 248 (313)
T ss_pred EEEEeccccccccccccCCcceEE-EEECCCCceEeeccccceeeccChhHhhhh-eeeccccCceEEEEeccCcceeec
Confidence 4555566677888888 5545554 999999999999999999999999986554 567778899999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-c---C------CeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-H---G------SCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~---~------~~i~i~d~~ 133 (134)
+++|..|-|=++.+|..+..+++.++...++|+|...+|+.. . + |.+++|-+.
T Consensus 249 aSEDh~IDIA~vetGd~~~eI~~~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiFG~~ 311 (313)
T KOG1407|consen 249 ASEDHFIDIAEVETGDRVWEIPCEGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIFGLS 311 (313)
T ss_pred cCccceEEeEecccCCeEEEeeccCCceeEEecCCCceeeEEecCCCCccccccceeEEecCC
Confidence 999999999999999999999999999999999999888743 2 2 577777543
No 77
>KOG0973|consensus
Probab=99.86 E-value=1.7e-20 Score=124.60 Aligned_cols=121 Identities=18% Similarity=0.323 Sum_probs=103.2
Q ss_pred eeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCC------C----C-------CCCeEEeCCCCCEeEEEEeeCC
Q psy6446 13 LHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNK------P----D-------AEPTVYRGHSSGIKHVQFFKNN 75 (134)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~------~----~-------~~~~~~~~~~~~v~~~~~~~~~ 75 (134)
+.+...+...++|+.|+|||++||+|+.|+.|.+|.... . . .....+.+|.+.|..+.|+|++
T Consensus 62 l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~ 141 (942)
T KOG0973|consen 62 LCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDD 141 (942)
T ss_pred heeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCc
Confidence 344445566677799999999999999999999999873 0 0 1223578999999999999999
Q ss_pred CEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEE-ecCCeEEEEeCC
Q psy6446 76 TRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITV-THGSCVTFLDAN 133 (134)
Q Consensus 76 ~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d~~ 133 (134)
.++++++.|++|.+||.++.+....+. |.+.|-.+.|+|-|+|+++ +.|++|++|++.
T Consensus 142 ~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~ 201 (942)
T KOG0973|consen 142 SLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTS 201 (942)
T ss_pred cEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcc
Confidence 999999999999999999998888777 6889999999999999998 578999999853
No 78
>KOG0281|consensus
Probab=99.86 E-value=1.2e-21 Score=117.63 Aligned_cols=127 Identities=21% Similarity=0.393 Sum_probs=105.5
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
||++|++.+++.+.++.++...+.|+.+ .++++++|+.|.+|++||+..+.++ +++.+|..-|.++.| |.+.+++
T Consensus 341 TikvW~~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cL-RvLeGHEeLvRciRF--d~krIVS 415 (499)
T KOG0281|consen 341 TIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACL-RVLEGHEELVRCIRF--DNKRIVS 415 (499)
T ss_pred eEEEEeccceeeehhhhcccccceehhc--cCeEEEecCCCceEEEEeccccHHH-HHHhchHHhhhheee--cCceeee
Confidence 6899999999999999988888877776 5899999999999999999998765 578999999999999 6889999
Q ss_pred eeCCCcEEEEecCCCceeEE---------E-ecCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQK---------L-EFGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~---------~-~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
|+.||+|++||+..+...+. + .+.+.|..+.|+.- +.+.++.|.+|.+||..
T Consensus 416 GaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD~f-qIvsssHddtILiWdFl 477 (499)
T KOG0281|consen 416 GAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEF-QIISSSHDDTILIWDFL 477 (499)
T ss_pred ccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeecce-EEEeccCCCeEEEEEcC
Confidence 99999999999987543321 1 24568888988632 44455689999999973
No 79
>KOG0639|consensus
Probab=99.86 E-value=8.1e-22 Score=123.00 Aligned_cols=131 Identities=22% Similarity=0.342 Sum_probs=112.3
Q ss_pred CeeEeecCCCceeeEEe--eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQ--HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
++.|||+.+..+....+ .......+++.+||.+..+++..||+|.|||+.... ..+.+.+|...+.++..++||..|
T Consensus 488 tlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~-~VrqfqGhtDGascIdis~dGtkl 566 (705)
T KOG0639|consen 488 TLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQT-LVRQFQGHTDGASCIDISKDGTKL 566 (705)
T ss_pred eeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccce-eeecccCCCCCceeEEecCCCcee
Confidence 57899998766543333 444555569999999999999999999999999854 456789999999999999999999
Q ss_pred EEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeC
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~ 132 (134)
.+|+-|++++-||+++++.+......+.|.++..+|++.+++.| .++.+.+...
T Consensus 567 WTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~ 621 (705)
T KOG0639|consen 567 WTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHT 621 (705)
T ss_pred ecCCCccceeehhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEec
Confidence 99999999999999999998888888999999999999999998 4677777543
No 80
>KOG0305|consensus
Probab=99.86 E-value=2.2e-20 Score=117.94 Aligned_cols=131 Identities=18% Similarity=0.302 Sum_probs=110.1
Q ss_pred eeEeecCCCceeeE-EeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee-CCCEEE
Q psy6446 2 GTVWDAVSGEELHS-FQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK-NNTRLI 79 (134)
Q Consensus 2 i~v~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~ 79 (134)
|..+|++..+.... +.++...++.+.|+++++++++|+.|+.+.|||..... +...+..|...|..++|+| ....|+
T Consensus 282 I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~-p~~~~~~H~aAVKA~awcP~q~~lLA 360 (484)
T KOG0305|consen 282 ILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPE-PKFTFTEHTAAVKALAWCPWQSGLLA 360 (484)
T ss_pred EEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCcc-ccEEEeccceeeeEeeeCCCccCceE
Confidence 66788887766544 66566666669999999999999999999999996644 4567889999999999999 566777
Q ss_pred Eee--CCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe---cCCeEEEEeCC
Q psy6446 80 SCA--EDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT---HGSCVTFLDAN 133 (134)
Q Consensus 80 ~~~--~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~---~~~~i~i~d~~ 133 (134)
+|+ .|+.|++||..+++.+......+.|..+.|++..+-++++ .++.|.||+..
T Consensus 361 sGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~p 419 (484)
T KOG0305|consen 361 TGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYP 419 (484)
T ss_pred EcCCCcccEEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEecc
Confidence 754 5899999999999999999999999999999999777764 45899999874
No 81
>KOG0772|consensus
Probab=99.86 E-value=8.9e-21 Score=118.45 Aligned_cols=116 Identities=17% Similarity=0.289 Sum_probs=91.8
Q ss_pred eCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEe-----CCCCCEeEEEEeeCCCEEEEeeCCCcEEEEe
Q psy6446 18 HPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYR-----GHSSGIKHVQFFKNNTRLISCAEDKTVRLWD 91 (134)
Q Consensus 18 ~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 91 (134)
++-..++|..|+| +...+++++.||++++|+++..+.....++ +.+-+++..+|+++++.++++..||.|.+|+
T Consensus 266 GHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~ 345 (641)
T KOG0772|consen 266 GHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWD 345 (641)
T ss_pred CceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeee
Confidence 4455567799999 556789999999999999988665544443 2344689999999999999999999999999
Q ss_pred cCCCce--eEEEe--c--CCCCeEEEEccCCcEEEE-ecCCeEEEEeCC
Q psy6446 92 VSASAE--VQKLE--F--GAVPNSLEISRDGTTITV-THGSCVTFLDAN 133 (134)
Q Consensus 92 ~~~~~~--~~~~~--~--~~~v~~~~~~~~~~~l~~-~~~~~i~i~d~~ 133 (134)
...... ..... | ...|+|++|+++|++|++ +.|+++++||++
T Consensus 346 ~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLr 394 (641)
T KOG0772|consen 346 KGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLR 394 (641)
T ss_pred cCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecc
Confidence 754322 22222 3 358999999999999987 789999999986
No 82
>KOG2110|consensus
Probab=99.86 E-value=1.1e-19 Score=109.27 Aligned_cols=132 Identities=16% Similarity=0.240 Sum_probs=107.4
Q ss_pred CeeEeecCCCceeeEEee--CCCc-eeeEEEccCCcEEEEe--cCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCC
Q psy6446 1 MGTVWDAVSGEELHSFQH--PHIV-KSSVHFATDSYRLATG--SNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNN 75 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~l~~~--~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 75 (134)
+|+|||+.+.+.+++++. +++. +.++.+++.+.+++.- ...|.|.+||..+-.. ...+..|.+.+.+++|+++|
T Consensus 107 ~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~-v~~I~aH~~~lAalafs~~G 185 (391)
T KOG2110|consen 107 SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQP-VNTINAHKGPLAALAFSPDG 185 (391)
T ss_pred cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEccccee-eeEEEecCCceeEEEECCCC
Confidence 489999999999999872 2322 3335555556677753 3368999999987554 45778999999999999999
Q ss_pred CEEEEeeCCCc-EEEEecCCCceeEEEecC---CCCeEEEEccCCcEEEEec-CCeEEEEeCC
Q psy6446 76 TRLISCAEDKT-VRLWDVSASAEVQKLEFG---AVPNSLEISRDGTTITVTH-GSCVTFLDAN 133 (134)
Q Consensus 76 ~~l~~~~~d~~-i~~~d~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~ 133 (134)
..|+|++..|+ |+++.+.+|+.+..+..+ ..|.+++|+|++++|++++ .++|+++-++
T Consensus 186 ~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~ 248 (391)
T KOG2110|consen 186 TLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLE 248 (391)
T ss_pred CEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEec
Confidence 99999999997 899999999999999853 5678999999999999865 5999999875
No 83
>KOG1539|consensus
Probab=99.86 E-value=6.7e-20 Score=119.63 Aligned_cols=130 Identities=21% Similarity=0.309 Sum_probs=112.3
Q ss_pred CeeEeecCCCceeeEE----eeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCC----------------------
Q psy6446 1 MGTVWDAVSGEELHSF----QHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDA---------------------- 54 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~---------------------- 54 (134)
+|.+||+++|-....| .|...+.. ++...-++.+++++.+|.+.+||+.+...
T Consensus 471 ~Id~fNmQSGi~r~sf~~~~ah~~~V~g-la~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~ 549 (910)
T KOG1539|consen 471 TIDRFNMQSGIHRKSFGDSPAHKGEVTG-LAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLL 549 (910)
T ss_pred eEEEEEcccCeeecccccCccccCceeE-EEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhh
Confidence 4789999999999888 25555555 99988888999999999999999875320
Q ss_pred ------------------CCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCC
Q psy6446 55 ------------------EPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDG 116 (134)
Q Consensus 55 ------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~ 116 (134)
..+.+.+|.+.+++++|||||++|++++.|++|++||+.++.++..+..+.+...+.|+|+|
T Consensus 550 a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~vd~~~~sls~SPng 629 (910)
T KOG1539|consen 550 AIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLVDSPCTSLSFSPNG 629 (910)
T ss_pred hhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEecCCcceeeEECCCC
Confidence 11235689999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEe-cC-CeEEEEe
Q psy6446 117 TTITVT-HG-SCVTFLD 131 (134)
Q Consensus 117 ~~l~~~-~~-~~i~i~d 131 (134)
.+|++. .| ..|.+|-
T Consensus 630 D~LAT~Hvd~~gIylWs 646 (910)
T KOG1539|consen 630 DFLATVHVDQNGIYLWS 646 (910)
T ss_pred CEEEEEEecCceEEEEE
Confidence 999987 44 7888885
No 84
>KOG4283|consensus
Probab=99.86 E-value=3.7e-20 Score=109.10 Aligned_cols=131 Identities=20% Similarity=0.333 Sum_probs=108.8
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEcc---CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFAT---DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTR 77 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 77 (134)
+++|||..+-+....|+-++.+.+ -+++| ...++++|..+-.|++.|+..+... ..+.+|.+.|.++.|+|...+
T Consensus 125 tlKVWDtnTlQ~a~~F~me~~VYs-hamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~s-H~LsGHr~~vlaV~Wsp~~e~ 202 (397)
T KOG4283|consen 125 TLKVWDTNTLQEAVDFKMEGKVYS-HAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFS-HTLSGHRDGVLAVEWSPSSEW 202 (397)
T ss_pred eEEEeecccceeeEEeecCceeeh-hhcChhhhcceEEEEecCCCcEEEEeccCCcce-eeeccccCceEEEEeccCcee
Confidence 589999999999989988888877 88888 3457888999999999999997654 678999999999999997776
Q ss_pred -EEEeeCCCcEEEEecCCC-ceeEEEe---------------cCCCCeEEEEccCCcEEEE-ecCCeEEEEeCC
Q psy6446 78 -LISCAEDKTVRLWDVSAS-AEVQKLE---------------FGAVPNSLEISRDGTTITV-THGSCVTFLDAN 133 (134)
Q Consensus 78 -l~~~~~d~~i~~~d~~~~-~~~~~~~---------------~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d~~ 133 (134)
|++++.||.+++||++.. .++..+. +.+.+.+++|..++.+++. +.|..+++|+.+
T Consensus 203 vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~ 276 (397)
T KOG4283|consen 203 VLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNME 276 (397)
T ss_pred EEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecc
Confidence 578999999999999754 3333332 3467889999999998886 578999999975
No 85
>KOG0310|consensus
Probab=99.85 E-value=1.6e-19 Score=111.68 Aligned_cols=128 Identities=20% Similarity=0.302 Sum_probs=112.4
Q ss_pred CeeEeecCCC-ceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSG-EELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+|++||+++. ..+..+.|..++-. +.+-|.|..|++++. +.+++||+.++.+.......|...|+|+++..++..|+
T Consensus 177 ~vrl~DtR~~~~~v~elnhg~pVe~-vl~lpsgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLl 254 (487)
T KOG0310|consen 177 KVRLWDTRSLTSRVVELNHGCPVES-VLALPSGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLL 254 (487)
T ss_pred eEEEEEeccCCceeEEecCCCceee-EEEcCCCCEEEEcCC-CeEEEEEecCCceehhhhhcccceEEEEEeecCCceEe
Confidence 5899999976 77888888888877 888899999998875 57999999987766666666999999999999999999
Q ss_pred EeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEE
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFL 130 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~ 130 (134)
+++-|+.+++||+.+-+.+..+..+++|.+++.+|+++.+++| ++|.+.+-
T Consensus 255 S~sLD~~VKVfd~t~~Kvv~s~~~~~pvLsiavs~dd~t~viGmsnGlv~~r 306 (487)
T KOG0310|consen 255 SGSLDRHVKVFDTTNYKVVHSWKYPGPVLSIAVSPDDQTVVIGMSNGLVSIR 306 (487)
T ss_pred ecccccceEEEEccceEEEEeeecccceeeEEecCCCceEEEecccceeeee
Confidence 9999999999999999999999999999999999999999987 56766553
No 86
>KOG0318|consensus
Probab=99.85 E-value=1.8e-19 Score=112.71 Aligned_cols=127 Identities=20% Similarity=0.311 Sum_probs=106.4
Q ss_pred cCCCceeeEEeeCCCceeeEEEccC-CcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCC
Q psy6446 7 AVSGEELHSFQHPHIVKSSVHFATD-SYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDK 85 (134)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 85 (134)
+.+|.-+-.+.++...+.++.|.|. .-++++|+.|+.|.+|.=.. -+....+..|..-|.++.|+|||.++++.+.||
T Consensus 134 ~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPP-FKFk~s~r~HskFV~~VRysPDG~~Fat~gsDg 212 (603)
T KOG0318|consen 134 WDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPP-FKFKSSFREHSKFVNCVRYSPDGSRFATAGSDG 212 (603)
T ss_pred ecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCC-eeeeecccccccceeeEEECCCCCeEEEecCCc
Confidence 3457777778877777877999994 45689999999999997432 223345678999999999999999999999999
Q ss_pred cEEEEecCCCceeEEEe----cCCCCeEEEEccCCcEEEE-ecCCeEEEEeCCC
Q psy6446 86 TVRLWDVSASAEVQKLE----FGAVPNSLEISRDGTTITV-THGSCVTFLDANS 134 (134)
Q Consensus 86 ~i~~~d~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d~~t 134 (134)
.+.+||-.+++.+..+. |.+.|.+++|+||+..+++ +.|.+++|||+.+
T Consensus 213 ki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~ 266 (603)
T KOG0318|consen 213 KIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVST 266 (603)
T ss_pred cEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeec
Confidence 99999999999988886 6788999999999987776 5799999999864
No 87
>KOG0646|consensus
Probab=99.85 E-value=7.8e-20 Score=112.60 Aligned_cols=133 Identities=19% Similarity=0.304 Sum_probs=115.9
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCC--------CCCCCeEEeCCCCCEeEEEEe
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNK--------PDAEPTVYRGHSSGIKHVQFF 72 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~--------~~~~~~~~~~~~~~v~~~~~~ 72 (134)
.|++|.+.+|+.+..+..+...++|+.|+-||.+|++|+.||.|.+|++.. ...+...+..|.-+|+++...
T Consensus 104 ~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig 183 (476)
T KOG0646|consen 104 NLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIG 183 (476)
T ss_pred cEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEec
Confidence 378999999999999887777777899999999999999999999998642 123445678999999999987
Q ss_pred eC--CCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 73 KN--NTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 73 ~~--~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+. ..++++++.|.++++||+..+..+..+..+..+.+++.+|-++.+.+| .+|.|.+.++.
T Consensus 184 ~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~ 247 (476)
T KOG0646|consen 184 SGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLF 247 (476)
T ss_pred CCCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehh
Confidence 64 468999999999999999999999999999999999999999888887 67999887764
No 88
>KOG0300|consensus
Probab=99.85 E-value=8.4e-20 Score=108.81 Aligned_cols=132 Identities=21% Similarity=0.437 Sum_probs=114.4
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
|..+||+++|+++..+.++....+-+.-+|..+++++++.|...++||++..-.....+.+|...|++..|..+ ..+++
T Consensus 295 TAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~d-d~vVS 373 (481)
T KOG0300|consen 295 TANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTD-DRVVS 373 (481)
T ss_pred cceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecC-Cceee
Confidence 34689999999999999666666558888999999999999999999999766666789999999999999854 45789
Q ss_pred eeCCCcEEEEecCCC-ceeEEEecCCCCeEEEEccCCcEEEEecC-CeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSAS-AEVQKLEFGAVPNSLEISRDGTTITVTHG-SCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~i~i~d~~ 133 (134)
++.|.+|++||+++. .++.++...++++.++.+..++.++.-.| ..|++||+.
T Consensus 374 gSDDrTvKvWdLrNMRsplATIRtdS~~NRvavs~g~~iIAiPhDNRqvRlfDln 428 (481)
T KOG0300|consen 374 GSDDRTVKVWDLRNMRSPLATIRTDSPANRVAVSKGHPIIAIPHDNRQVRLFDLN 428 (481)
T ss_pred cCCCceEEEeeeccccCcceeeecCCccceeEeecCCceEEeccCCceEEEEecC
Confidence 999999999999875 46778888999999999998889999765 899999985
No 89
>KOG0308|consensus
Probab=99.85 E-value=4.3e-20 Score=117.89 Aligned_cols=133 Identities=20% Similarity=0.340 Sum_probs=110.9
Q ss_pred CeeEeecCCC--ceeeEEeeCCCceeeEEE-ccCCcEEEEecCCCeEEEEECCCCCC---------CCeEE-eCCCCCEe
Q psy6446 1 MGTVWDAVSG--EELHSFQHPHIVKSSVHF-ATDSYRLATGSNDKNIRIYDLNKPDA---------EPTVY-RGHSSGIK 67 (134)
Q Consensus 1 ~i~v~d~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~d~~v~i~~~~~~~~---------~~~~~-~~~~~~v~ 67 (134)
||++|+...+ -+..++..+...+.|++. .++...+++|+.|+.|.+||++++.. ....+ .++...|.
T Consensus 96 TVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siY 175 (735)
T KOG0308|consen 96 TVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIY 175 (735)
T ss_pred eEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCcccee
Confidence 6899999877 567778755556666998 77888999999999999999997632 11112 27888999
Q ss_pred EEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEE-ecCCeEEEEeCC
Q psy6446 68 HVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITV-THGSCVTFLDAN 133 (134)
Q Consensus 68 ~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d~~ 133 (134)
+++.++.+..+++|+-++.+++||.++++.+..+. |...|..+..++||..+++ ++||+|++||+.
T Consensus 176 SLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLg 243 (735)
T KOG0308|consen 176 SLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLG 243 (735)
T ss_pred eeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecc
Confidence 99999999999999999999999999998887776 6788999999999987776 579999999985
No 90
>KOG0647|consensus
Probab=99.85 E-value=1.6e-19 Score=106.36 Aligned_cols=129 Identities=18% Similarity=0.340 Sum_probs=104.3
Q ss_pred CeeEeecCC-CceeeE--EeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCC--
Q psy6446 1 MGTVWDAVS-GEELHS--FQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNN-- 75 (134)
Q Consensus 1 ~i~v~d~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-- 75 (134)
+||+|+++. |..+-+ ..+..+++. ++|+.+|..+++|+.|+.+++||+.+++ ......|.++|..+.|-+..
T Consensus 51 tVR~wevq~~g~~~~ka~~~~~~PvL~-v~WsddgskVf~g~~Dk~~k~wDL~S~Q--~~~v~~Hd~pvkt~~wv~~~~~ 127 (347)
T KOG0647|consen 51 TVRIWEVQNSGQLVPKAQQSHDGPVLD-VCWSDDGSKVFSGGCDKQAKLWDLASGQ--VSQVAAHDAPVKTCHWVPGMNY 127 (347)
T ss_pred ceEEEEEecCCcccchhhhccCCCeEE-EEEccCCceEEeeccCCceEEEEccCCC--eeeeeecccceeEEEEecCCCc
Confidence 689999985 454433 236666666 9999999999999999999999999874 34567899999999998754
Q ss_pred CEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 76 TRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 76 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
+.|+||+.|.+|+.||++...++.++..+..+.++..-.. ..+++..+..|.+|+++
T Consensus 128 ~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~p-m~vVata~r~i~vynL~ 184 (347)
T KOG0647|consen 128 QCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYP-MAVVATAERHIAVYNLE 184 (347)
T ss_pred ceeEecccccceeecccCCCCeeeeeeccceeeehhccCc-eeEEEecCCcEEEEEcC
Confidence 4899999999999999999999999988888877765322 33344578999999985
No 91
>KOG0293|consensus
Probab=99.84 E-value=2.8e-20 Score=113.61 Aligned_cols=119 Identities=18% Similarity=0.229 Sum_probs=101.2
Q ss_pred EEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCC--CCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEec
Q psy6446 15 SFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDA--EPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDV 92 (134)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 92 (134)
.+..+...+..+.|+++|++||+++.|.+..+|++..... +..++.+|..+|..+.|+||.++|++|+.+..+.+||.
T Consensus 219 il~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv 298 (519)
T KOG0293|consen 219 ILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDV 298 (519)
T ss_pred hHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccC
Confidence 3343444555599999999999999999999998765433 34567899999999999999999999999999999999
Q ss_pred CCCceeEEEecC--CCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 93 SASAEVQKLEFG--AVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 93 ~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
.+|.....++.. ..+.+.+|.|||..+++| .|+.+..||+.
T Consensus 299 ~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD 342 (519)
T KOG0293|consen 299 DTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD 342 (519)
T ss_pred CcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCC
Confidence 999988888754 778999999999888876 68999999975
No 92
>KOG0275|consensus
Probab=99.84 E-value=1.3e-20 Score=112.56 Aligned_cols=132 Identities=21% Similarity=0.348 Sum_probs=112.9
Q ss_pred CeeEeecCCCceeeEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
.|++|-+.+|.+++.|+ .+...++|+.|+.|+..+++++.|..+++.-+..++.+ ..+++|..-|+...|.++|..++
T Consensus 286 kIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~L-KEfrGHsSyvn~a~ft~dG~~ii 364 (508)
T KOG0275|consen 286 KIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCL-KEFRGHSSYVNEATFTDDGHHII 364 (508)
T ss_pred cEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhH-HHhcCccccccceEEcCCCCeEE
Confidence 37899999999999998 45555666999999999999999999999999998765 56899999999999999999999
Q ss_pred EeeCCCcEEEEecCCCceeEEEec---CCCCeEEEEccCC-c-EEEEecCCeEEEEeCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLEF---GAVPNSLEISRDG-T-TITVTHGSCVTFLDAN 133 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~~---~~~v~~~~~~~~~-~-~l~~~~~~~i~i~d~~ 133 (134)
+++.||++++|+..+.++..+++. +.+|.++..-|.+ . ++++...+++.+-++.
T Consensus 365 saSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q 423 (508)
T KOG0275|consen 365 SASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ 423 (508)
T ss_pred EecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc
Confidence 999999999999999999888873 5678888887765 3 4445567888887763
No 93
>KOG0640|consensus
Probab=99.84 E-value=1.2e-20 Score=111.84 Aligned_cols=133 Identities=20% Similarity=0.353 Sum_probs=108.0
Q ss_pred CeeEeecCCCceeeE---EeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCe--EEeCCCCCEeEEEEeeCC
Q psy6446 1 MGTVWDAVSGEELHS---FQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPT--VYRGHSSGIKHVQFFKNN 75 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~ 75 (134)
+|+++|.......+. ++....+ .++.|+|.|.+|++|.....+++||+++.++... .-..|.+.|+++.+++.+
T Consensus 195 tvKlFDfsK~saKrA~K~~qd~~~v-rsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~ 273 (430)
T KOG0640|consen 195 TVKLFDFSKTSAKRAFKVFQDTEPV-RSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTG 273 (430)
T ss_pred eEEEEecccHHHHHHHHHhhcccee-eeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCc
Confidence 467788765433332 3333444 4499999999999999999999999998654322 234688999999999999
Q ss_pred CEEEEeeCCCcEEEEecCCCceeEEEe--c-CCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 76 TRLISCAEDKTVRLWDVSASAEVQKLE--F-GAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 76 ~~l~~~~~d~~i~~~d~~~~~~~~~~~--~-~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
+..++++.||.|++||--.++++.++. | +..|.+..|..+|++++++ .|..+++|.+-|
T Consensus 274 ~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t 336 (430)
T KOG0640|consen 274 SLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEIST 336 (430)
T ss_pred cEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecC
Confidence 999999999999999999999998886 2 5789999999999999975 689999998753
No 94
>KOG0643|consensus
Probab=99.84 E-value=4.7e-19 Score=103.05 Aligned_cols=117 Identities=16% Similarity=0.276 Sum_probs=104.0
Q ss_pred EeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCC
Q psy6446 16 FQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSAS 95 (134)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 95 (134)
++++++.++-+.++.+|.+|++++.|..+.+|--.+++.+ -.+.+|.+.|.+++..-+.+.+++|+.|.++++||+.+|
T Consensus 6 l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerl-Gty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tG 84 (327)
T KOG0643|consen 6 LQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERL-GTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETG 84 (327)
T ss_pred cccCccccceEEecCCCcEEEEecCCCCceEEEecCCcee-eeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCC
Confidence 4455555555999999999999999999999998777765 579999999999999999999999999999999999999
Q ss_pred ceeEEEecCCCCeEEEEccCCcEEEEec------CCeEEEEeCC
Q psy6446 96 AEVQKLEFGAVPNSLEISRDGTTITVTH------GSCVTFLDAN 133 (134)
Q Consensus 96 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~~~i~i~d~~ 133 (134)
+++..++.+.+|..+.|+++|.+++.+. .+.|.++|++
T Consensus 85 k~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~ 128 (327)
T KOG0643|consen 85 KQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIR 128 (327)
T ss_pred cEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEcc
Confidence 9999999999999999999998877653 2689999886
No 95
>KOG0640|consensus
Probab=99.83 E-value=5e-20 Score=109.29 Aligned_cols=117 Identities=23% Similarity=0.334 Sum_probs=96.8
Q ss_pred eCCCceeeEEEccCCcEEEEecCCCeEEEEECCC-----------------CCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 18 HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNK-----------------PDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 18 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~-----------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
.++.+..+.+|++||.++++|+.|-.|++.|... ..+..+.+-.|..+|+++.|+|....|++
T Consensus 110 ~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS 189 (430)
T KOG0640|consen 110 SHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILIS 189 (430)
T ss_pred ecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEe
Confidence 4455566699999999999999999999999861 01233456678899999999999999999
Q ss_pred eeCCCcEEEEecCCCceeE---EEecCCCCeEEEEccCCcEEEEecC-CeEEEEeCCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQ---KLEFGAVPNSLEISRDGTTITVTHG-SCVTFLDANS 134 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~-~~i~i~d~~t 134 (134)
++.|+++++||+......+ .+....++.+++|+|.|.+++++.| ..+++||++|
T Consensus 190 ~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T 247 (430)
T KOG0640|consen 190 GSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNT 247 (430)
T ss_pred ccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccc
Confidence 9999999999998654433 3335678999999999999999977 7999999875
No 96
>KOG0306|consensus
Probab=99.83 E-value=1.7e-19 Score=116.92 Aligned_cols=131 Identities=24% Similarity=0.382 Sum_probs=114.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
|+.||-+.+-+.-..+.++.-++.|+..+||++.+++||.|.+|++|-++-+.+. ..+.+|...|.++.|.|+...+.+
T Consensus 531 TVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCH-KS~fAHdDSvm~V~F~P~~~~FFt 609 (888)
T KOG0306|consen 531 TVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCH-KSFFAHDDSVMSVQFLPKTHLFFT 609 (888)
T ss_pred eEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhh-hhhhcccCceeEEEEcccceeEEE
Confidence 5778888887776666655555555999999999999999999999999988765 457789999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~ 132 (134)
++.|+.++-||-.....++.+. |...++|++.+|+|.+++++ .|..|++|..
T Consensus 610 ~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~ 663 (888)
T KOG0306|consen 610 CGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWER 663 (888)
T ss_pred ecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeEeeec
Confidence 9999999999998888888887 67899999999999999986 6899999974
No 97
>KOG1273|consensus
Probab=99.83 E-value=1e-19 Score=107.96 Aligned_cols=100 Identities=17% Similarity=0.374 Sum_probs=90.0
Q ss_pred eEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecC
Q psy6446 14 HSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVS 93 (134)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 93 (134)
.++++.. ..|+.|++.|.+|++|+.||.+-|||+.+.. +.+++.+|..+|++++|+++|+.|++++.|..+.+||+.
T Consensus 19 ~tld~~~--a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~-iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~ 95 (405)
T KOG1273|consen 19 HTLDNPL--AECCQFSRWGDYLAVGCANGRVVIYDFDTFR-IARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLL 95 (405)
T ss_pred eeccCCc--cceEEeccCcceeeeeccCCcEEEEEccccc-hhhhhhccccceeEEEecCCCCEeeeecCCceeEEEecc
Confidence 3444444 4559999999999999999999999999854 567889999999999999999999999999999999999
Q ss_pred CCceeEEEecCCCCeEEEEccCC
Q psy6446 94 ASAEVQKLEFGAVPNSLEISRDG 116 (134)
Q Consensus 94 ~~~~~~~~~~~~~v~~~~~~~~~ 116 (134)
.|.+...+...++|....|+|..
T Consensus 96 ~gs~l~rirf~spv~~~q~hp~k 118 (405)
T KOG1273|consen 96 KGSPLKRIRFDSPVWGAQWHPRK 118 (405)
T ss_pred CCCceeEEEccCccceeeecccc
Confidence 99999999999999999999965
No 98
>KOG0274|consensus
Probab=99.83 E-value=1.2e-18 Score=112.79 Aligned_cols=129 Identities=21% Similarity=0.362 Sum_probs=111.5
Q ss_pred CeeEeecCCCceeeE-EeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHS-FQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+|++||..++..+.. +.++...+.++++..-+..+++|+.|.++++||..++.+. ..+.+|.+.+.++.. ....++
T Consensus 229 tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~-~~l~gh~stv~~~~~--~~~~~~ 305 (537)
T KOG0274|consen 229 TLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECT-HSLQGHTSSVRCLTI--DPFLLV 305 (537)
T ss_pred eeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEE-EEecCCCceEEEEEc--cCceEe
Confidence 468999999999887 8877777777999877899999999999999999988765 578899999999887 456778
Q ss_pred EeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEE-ecCCeEEEEeCCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITV-THGSCVTFLDANS 134 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d~~t 134 (134)
+|+.|.+|++|++.+++.+..+. +..+|.++..+ +.++++ +.|+.|.+||+.+
T Consensus 306 sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~ 360 (537)
T KOG0274|consen 306 SGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRT 360 (537)
T ss_pred eccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhh
Confidence 88999999999999999999999 89999999988 566665 4789999999853
No 99
>KOG0296|consensus
Probab=99.83 E-value=2.2e-18 Score=103.74 Aligned_cols=119 Identities=19% Similarity=0.219 Sum_probs=103.9
Q ss_pred eeEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEe
Q psy6446 13 LHSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWD 91 (134)
Q Consensus 13 ~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 91 (134)
+..|. |...++. ++.+|+.+++++|+.|...++|++.++. ....+.+|+..|.++.|+.++.+|+||+.+|.|++|+
T Consensus 57 ~~tF~~H~~svFa-vsl~P~~~l~aTGGgDD~AflW~~~~ge-~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~ 134 (399)
T KOG0296|consen 57 LVTFDKHTDSVFA-VSLHPNNNLVATGGGDDLAFLWDISTGE-FAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFK 134 (399)
T ss_pred eeehhhcCCceEE-EEeCCCCceEEecCCCceEEEEEccCCc-ceeEecCCCCceEEEEEccCceEEEecCCCccEEEEE
Confidence 44555 5555555 9999999999999999999999999977 4567899999999999999999999999999999999
Q ss_pred cCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 92 VSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 92 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
..++.....+. .-..+.=++|+|-+..+++| .||.+.+|.+.
T Consensus 135 ~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip 178 (399)
T KOG0296|consen 135 VSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIP 178 (399)
T ss_pred cccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECC
Confidence 99999888876 34667789999999988887 68999999875
No 100
>KOG0302|consensus
Probab=99.82 E-value=3.2e-19 Score=107.86 Aligned_cols=124 Identities=18% Similarity=0.348 Sum_probs=97.7
Q ss_pred CceeeEEe-eCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCC--CCeEEeCCCCCEeEEEEeeC-CCEEEEeeCC
Q psy6446 10 GEELHSFQ-HPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDA--EPTVYRGHSSGIKHVQFFKN-NTRLISCAED 84 (134)
Q Consensus 10 ~~~~~~~~-~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~--~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d 84 (134)
.+++.++. |...... +.||| ....|++|..-+.|++|...++.- -...+.+|...|-.++|+|. ...+++|+.|
T Consensus 201 ~~Pl~t~~ghk~EGy~-LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~D 279 (440)
T KOG0302|consen 201 FRPLFTFNGHKGEGYG-LDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCD 279 (440)
T ss_pred cCceEEecccCcccee-eecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecC
Confidence 34677777 5555555 99999 334588888889999999877531 12346679999999999994 5678899999
Q ss_pred CcEEEEecCCC---ceeEEEecCCCCeEEEEccCCcEEEEec-CCeEEEEeCCC
Q psy6446 85 KTVRLWDVSAS---AEVQKLEFGAVPNSLEISRDGTTITVTH-GSCVTFLDANS 134 (134)
Q Consensus 85 ~~i~~~d~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~t 134 (134)
++|+|||++.+ .++..-.+.+.|+-+.|+..-.+|++|. ||+++|||++.
T Consensus 280 gsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~ 333 (440)
T KOG0302|consen 280 GSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQ 333 (440)
T ss_pred ceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhh
Confidence 99999999988 4555555788999999999888888875 59999999974
No 101
>KOG0288|consensus
Probab=99.82 E-value=8.3e-19 Score=106.98 Aligned_cols=128 Identities=20% Similarity=0.318 Sum_probs=107.4
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCC----CCCEeEEEEeeCCC
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGH----SSGIKHVQFFKNNT 76 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~ 76 (134)
+|+.||.++..+....+..+.+.+ +..++++..+++++.|..+.+.|+++.. +...+... ....+.+.|||++.
T Consensus 323 kvRfwD~Rs~~~~~sv~~gg~vtS-l~ls~~g~~lLsssRDdtl~viDlRt~e-I~~~~sA~g~k~asDwtrvvfSpd~~ 400 (459)
T KOG0288|consen 323 KVRFWDIRSADKTRSVPLGGRVTS-LDLSMDGLELLSSSRDDTLKVIDLRTKE-IRQTFSAEGFKCASDWTRVVFSPDGS 400 (459)
T ss_pred ceEEEeccCCceeeEeecCcceee-EeeccCCeEEeeecCCCceeeeeccccc-EEEEeeccccccccccceeEECCCCc
Confidence 489999999999999987766655 9999999999999999999999999854 23333321 23488999999999
Q ss_pred EEEEeeCCCcEEEEecCCCceeEEEec---CCCCeEEEEccCCcEEEEe-cCCeEEEE
Q psy6446 77 RLISCAEDKTVRLWDVSASAEVQKLEF---GAVPNSLEISRDGTTITVT-HGSCVTFL 130 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~-~~~~i~i~ 130 (134)
|+++|+.||.|+||++.++++...+.. ...|.+++|+|.|..++++ .++.+.+|
T Consensus 401 YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 401 YVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred eeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence 999999999999999999999888874 2369999999999888865 57888888
No 102
>KOG0303|consensus
Probab=99.82 E-value=1.7e-19 Score=109.60 Aligned_cols=116 Identities=22% Similarity=0.415 Sum_probs=101.0
Q ss_pred eCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCC------CCCeEEeCCCCCEeEEEEee-CCCEEEEeeCCCcEEE
Q psy6446 18 HPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPD------AEPTVYRGHSSGIKHVQFFK-NNTRLISCAEDKTVRL 89 (134)
Q Consensus 18 ~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~ 89 (134)
|...+.. ++|+| +.+.|++||.|..|.+|++.... .+...+.+|...|..++|+| -.+.|++++.|++|.+
T Consensus 80 Ht~~vLD-i~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~i 158 (472)
T KOG0303|consen 80 HTAPVLD-IDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSI 158 (472)
T ss_pred ccccccc-cccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEE
Confidence 4455555 99999 77889999999999999986532 34557889999999999999 4678899999999999
Q ss_pred EecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 90 WDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 90 ~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
||+.+++.+..+.|...|.+++|+.||.+++++ .|..|+|||.++
T Consensus 159 Wnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~ 204 (472)
T KOG0303|consen 159 WNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRR 204 (472)
T ss_pred EeccCCceeeecCCCCeEEEEEeccCCceeeeecccceeEEEcCCC
Confidence 999999999999999999999999999998874 799999999874
No 103
>KOG1274|consensus
Probab=99.82 E-value=1.2e-18 Score=114.84 Aligned_cols=132 Identities=14% Similarity=0.144 Sum_probs=108.7
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeC--------CCCCEeEEEEee
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRG--------HSSGIKHVQFFK 73 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~--------~~~~v~~~~~~~ 73 (134)
|++-++.+......++++...+.++.|+|++++|++.+.||.|++|++.++... .++.+ ....+..++|+|
T Consensus 120 vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~-~tl~~v~k~n~~~~s~i~~~~aW~P 198 (933)
T KOG1274|consen 120 VKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILS-KTLTGVDKDNEFILSRICTRLAWHP 198 (933)
T ss_pred EEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhh-hhcccCCccccccccceeeeeeecC
Confidence 567777777788888866666666999999999999999999999999875432 22211 145678999999
Q ss_pred CCCEEEEeeCCCcEEEEecCCCceeEEEec---CCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 74 NNTRLISCAEDKTVRLWDVSASAEVQKLEF---GAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 74 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++..++....|+.|++|+..++.....+.. .+.+..+.|+|+|+||+++ -+|.|.|||.+|
T Consensus 199 k~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 199 KGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDT 263 (933)
T ss_pred CCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEeccc
Confidence 999999999999999999999888877762 4458999999999999987 689999999874
No 104
>KOG0306|consensus
Probab=99.82 E-value=4.8e-19 Score=114.86 Aligned_cols=130 Identities=21% Similarity=0.327 Sum_probs=114.4
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|+||+..++....++.++...++++.|+..|..|++|+.|+.|.+||+-... -...+.+|...|+.+-|..+.+++++
T Consensus 88 sVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~-Gl~rL~GHkd~iT~~~F~~~~~~lvS 166 (888)
T KOG0306|consen 88 SVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEE-GLFRLRGHKDSITQALFLNGDSFLVS 166 (888)
T ss_pred eEEeeccCCCceeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccce-eeEEeecchHHHhHHhccCCCeEEEE
Confidence 48999999998888998777778779999999999999999999999997633 34568999999999999988999999
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEecCCeEEEEeC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~ 132 (134)
.+.|+.|++||+.+..+..+.- +...+..+++++ ...++++.|+.+.+|++
T Consensus 167 ~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~-~~lvt~~~dse~~v~~L 218 (888)
T KOG0306|consen 167 VSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDE-KLLVTAGTDSELKVWEL 218 (888)
T ss_pred eccCceEEEEecccceeeeEEecccceEEEEEEec-ceEEEEecCCceEEEEe
Confidence 9999999999999999988765 678999999997 34555668999999987
No 105
>KOG0294|consensus
Probab=99.82 E-value=9.8e-19 Score=103.63 Aligned_cols=118 Identities=20% Similarity=0.333 Sum_probs=99.7
Q ss_pred eeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCC--EEEEeeCCCcEEEE
Q psy6446 13 LHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNT--RLISCAEDKTVRLW 90 (134)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~~~ 90 (134)
+..+..+...++++++ ++.++++|+.|-+|+|||++...+. ..+..|.+.|+++.|.+... .|++|+.||.|.+|
T Consensus 36 lF~~~aH~~sitavAV--s~~~~aSGssDetI~IYDm~k~~ql-g~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw 112 (362)
T KOG0294|consen 36 LFAFSAHAGSITALAV--SGPYVASGSSDETIHIYDMRKRKQL-GILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIW 112 (362)
T ss_pred cccccccccceeEEEe--cceeEeccCCCCcEEEEeccchhhh-cceeccccceEEEEecCCcchhheeeecCCCcEEEE
Confidence 4455555556666888 5899999999999999999986655 45678999999999998664 89999999999999
Q ss_pred ecCCCceeEEEe-cCCCCeEEEEccCCcEEE-EecCCeEEEEeCC
Q psy6446 91 DVSASAEVQKLE-FGAVPNSLEISRDGTTIT-VTHGSCVTFLDAN 133 (134)
Q Consensus 91 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~-~~~~~~i~i~d~~ 133 (134)
+.....++..+. |...|+.++.+|.+++.+ ++.|+.+++||+-
T Consensus 113 ~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV 157 (362)
T KOG0294|consen 113 RVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLV 157 (362)
T ss_pred EcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhh
Confidence 999998888887 567799999999998755 5789999999973
No 106
>KOG0270|consensus
Probab=99.82 E-value=5.1e-18 Score=104.28 Aligned_cols=132 Identities=15% Similarity=0.279 Sum_probs=108.8
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCC-CEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNN-TRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l 78 (134)
||.+||+.+|++...+.+++..++++.|+| .+..|++|+.|++|.+.|.+.........+ -.+.|-.++|.|.. ..+
T Consensus 267 TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk-~~g~VEkv~w~~~se~~f 345 (463)
T KOG0270|consen 267 TVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWK-FDGEVEKVAWDPHSENSF 345 (463)
T ss_pred eEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEE-eccceEEEEecCCCceeE
Confidence 689999999999999997777777799999 678899999999999999996444433333 45789999999955 556
Q ss_pred EEeeCCCcEEEEecCCC-ceeEEEe-cCCCCeEEEEccCCcEEE-E-ecCCeEEEEeCC
Q psy6446 79 ISCAEDKTVRLWDVSAS-AEVQKLE-FGAVPNSLEISRDGTTIT-V-THGSCVTFLDAN 133 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~-~~~~~~~-~~~~v~~~~~~~~~~~l~-~-~~~~~i~i~d~~ 133 (134)
+++..||.++-+|+|.. +++.++. |..+|.++++++....++ + +.++.+++|++.
T Consensus 346 ~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~ 404 (463)
T KOG0270|consen 346 FVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFD 404 (463)
T ss_pred EEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeec
Confidence 77889999999999975 7787777 789999999998775444 4 368999999874
No 107
>KOG0313|consensus
Probab=99.81 E-value=1.1e-18 Score=105.52 Aligned_cols=133 Identities=17% Similarity=0.275 Sum_probs=110.1
Q ss_pred CeeEeecCCCcee----eEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCC------------------------
Q psy6446 1 MGTVWDAVSGEEL----HSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKP------------------------ 52 (134)
Q Consensus 1 ~i~v~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~------------------------ 52 (134)
++++|-+..++.. +..+++...+.++...++|..+++|+.|..+.+|+..+.
T Consensus 170 tl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~ 249 (423)
T KOG0313|consen 170 TLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGT 249 (423)
T ss_pred eEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccc
Confidence 4677877766542 233366677777999999999999999999999993210
Q ss_pred CCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEe
Q psy6446 53 DAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLD 131 (134)
Q Consensus 53 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d 131 (134)
..+...+.+|..+|.++.|++ ...+++++.|.+|+.||+.++.....+..+....++..+|...++++| .|..|++||
T Consensus 250 r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~D 328 (423)
T KOG0313|consen 250 RTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWD 328 (423)
T ss_pred cCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecC
Confidence 112345789999999999997 778899999999999999999999999999999999999999988886 689999999
Q ss_pred CCC
Q psy6446 132 ANS 134 (134)
Q Consensus 132 ~~t 134 (134)
.++
T Consensus 329 PR~ 331 (423)
T KOG0313|consen 329 PRT 331 (423)
T ss_pred CCC
Confidence 874
No 108
>KOG0293|consensus
Probab=99.81 E-value=1e-18 Score=106.96 Aligned_cols=130 Identities=22% Similarity=0.359 Sum_probs=109.9
Q ss_pred eeEeecCCCceeeEEeeC-CCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCC-CCCEeEEEEeeCCCEEE
Q psy6446 2 GTVWDAVSGEELHSFQHP-HIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGH-SSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~ 79 (134)
+.+||+.+|.....+.+. +..+.+++|.|||..+++|+.|+.+..||++... .....+. ...|.+++..+||++++
T Consensus 293 ~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~--~~~W~gvr~~~v~dlait~Dgk~vl 370 (519)
T KOG0293|consen 293 LSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNI--LGNWEGVRDPKVHDLAITYDGKYVL 370 (519)
T ss_pred eeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcch--hhcccccccceeEEEEEcCCCcEEE
Confidence 679999999999988844 3444559999999999999999999999998633 2222222 25699999999999999
Q ss_pred EeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+...|..+++++..+.........+.++.+.+.+.+++++++. .+..+++||++
T Consensus 371 ~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~ 425 (519)
T KOG0293|consen 371 LVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLE 425 (519)
T ss_pred EEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecc
Confidence 9999999999999887777677788999999999999999887 78999999985
No 109
>KOG0288|consensus
Probab=99.80 E-value=2e-18 Score=105.35 Aligned_cols=129 Identities=14% Similarity=0.191 Sum_probs=104.0
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
||++||+....+.+++-....... +..+ ...+++|..|+.|++||.+...... ....+ +.|+++..++++..+++
T Consensus 284 tiK~WDl~k~~C~kt~l~~S~cnD-I~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~-sv~~g-g~vtSl~ls~~g~~lLs 358 (459)
T KOG0288|consen 284 TIKLWDLQKAYCSKTVLPGSQCND-IVCS--ISDVISGHFDKKVRFWDIRSADKTR-SVPLG-GRVTSLDLSMDGLELLS 358 (459)
T ss_pred hhhhhhhhhhheeccccccccccc-eEec--ceeeeecccccceEEEeccCCceee-EeecC-cceeeEeeccCCeEEee
Confidence 578999999888877654433333 5544 5678899999999999999876543 33444 59999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEec-----CCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLEF-----GAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
++.|.++.+.|+++......+.. ....+.+.|||++.|+++| .||.|+||++.+
T Consensus 359 ssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~t 418 (459)
T KOG0288|consen 359 SSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFT 418 (459)
T ss_pred ecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccC
Confidence 99999999999998877766652 4567899999999999987 689999999864
No 110
>KOG0300|consensus
Probab=99.80 E-value=3e-19 Score=106.51 Aligned_cols=133 Identities=17% Similarity=0.294 Sum_probs=114.0
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECC------CC----------------------
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLN------KP---------------------- 52 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~------~~---------------------- 52 (134)
|.+||.+++|+++.++.++.+.++++.|++.+.++++++.|+...||... ..
T Consensus 171 TA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~ 250 (481)
T KOG0300|consen 171 TARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDT 250 (481)
T ss_pred ceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhccccccccc
Confidence 46899999999999999777777779999999999999999999999721 00
Q ss_pred -----------CCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEE
Q psy6446 53 -----------DAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTIT 120 (134)
Q Consensus 53 -----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~ 120 (134)
..+...+.+|.+.|.+..|-..++.+++++.|.+..+||+.++..+..+. |+.+.+.++-+|..++++
T Consensus 251 d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVv 330 (481)
T KOG0300|consen 251 DSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVV 330 (481)
T ss_pred ccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEE
Confidence 01223467899999999999999999999999999999999999998876 678888888899988888
Q ss_pred Ee-cCCeEEEEeCC
Q psy6446 121 VT-HGSCVTFLDAN 133 (134)
Q Consensus 121 ~~-~~~~i~i~d~~ 133 (134)
++ .|.+.++||++
T Consensus 331 TsSrDtTFRLWDFR 344 (481)
T KOG0300|consen 331 TSSRDTTFRLWDFR 344 (481)
T ss_pred EeccCceeEeccch
Confidence 75 68999999985
No 111
>KOG1036|consensus
Probab=99.80 E-value=7.4e-18 Score=99.47 Aligned_cols=128 Identities=23% Similarity=0.361 Sum_probs=106.5
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
++++||.........+++..+... ++|.+ ...+++|+.||.|+.+|+.++... .+..|..++.++.+++....+++
T Consensus 36 slrlYdv~~~~l~~~~~~~~plL~-c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~--~igth~~~i~ci~~~~~~~~vIs 111 (323)
T KOG1036|consen 36 SLRLYDVPANSLKLKFKHGAPLLD-CAFAD-ESTIVTGGLDGQVRRYDLNTGNED--QIGTHDEGIRCIEYSYEVGCVIS 111 (323)
T ss_pred cEEEEeccchhhhhheecCCceee-eeccC-CceEEEeccCceEEEEEecCCcce--eeccCCCceEEEEeeccCCeEEE
Confidence 478999988877788888888887 88875 568999999999999999986543 46779999999999998899999
Q ss_pred eeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEE-EecCCeEEEEeCCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTIT-VTHGSCVTFLDANS 134 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~i~i~d~~t 134 (134)
|+.|++|++||.+.......+.....|.++... +..|+ .+.+..+.+||+++
T Consensus 112 gsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~v~--g~~LvVg~~~r~v~iyDLRn 164 (323)
T KOG1036|consen 112 GSWDKTIKFWDPRNKVVVGTFDQGKKVYCMDVS--GNRLVVGTSDRKVLIYDLRN 164 (323)
T ss_pred cccCccEEEEeccccccccccccCceEEEEecc--CCEEEEeecCceEEEEEccc
Confidence 999999999999986666666666788888765 44444 56899999999974
No 112
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.80 E-value=2.8e-17 Score=94.67 Aligned_cols=118 Identities=13% Similarity=0.214 Sum_probs=87.2
Q ss_pred ceeeEEee-CCCceeeEEEccCCcEEEEe--cCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeC---C
Q psy6446 11 EELHSFQH-PHIVKSSVHFATDSYRLATG--SNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAE---D 84 (134)
Q Consensus 11 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~--~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d 84 (134)
.+...++. ....+..++|+|+|+.|++. ..++.+.+||++. ... ..-....+..+.|+|+|+++++++. .
T Consensus 49 ~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~~-~~i---~~~~~~~~n~i~wsP~G~~l~~~g~~n~~ 124 (194)
T PF08662_consen 49 IPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVKG-KKI---FSFGTQPRNTISWSPDGRFLVLAGFGNLN 124 (194)
T ss_pred CccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCcc-cEe---EeecCCCceEEEECCCCCEEEEEEccCCC
Confidence 34444442 22235559999999987654 4567999999973 222 2234567889999999999998864 3
Q ss_pred CcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe--c-----CCeEEEEeCC
Q psy6446 85 KTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT--H-----GSCVTFLDAN 133 (134)
Q Consensus 85 ~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~-----~~~i~i~d~~ 133 (134)
|.+.+||.++.+.+....+.. +..++|+|+|++++++ . |+.++||+..
T Consensus 125 G~l~~wd~~~~~~i~~~~~~~-~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~ 179 (194)
T PF08662_consen 125 GDLEFWDVRKKKKISTFEHSD-ATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ 179 (194)
T ss_pred cEEEEEECCCCEEeeccccCc-EEEEEEcCCCCEEEEEEeccceeccccEEEEEec
Confidence 679999999888887776554 6899999999999864 2 6889999864
No 113
>KOG1445|consensus
Probab=99.79 E-value=6.1e-19 Score=113.27 Aligned_cols=113 Identities=21% Similarity=0.369 Sum_probs=97.1
Q ss_pred CceeeEEEcc-CCcEEEEecCCCeEEEEECCCCC------CCCeEEeCCCCCEeEEEEee-CCCEEEEeeCCCcEEEEec
Q psy6446 21 IVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPD------AEPTVYRGHSSGIKHVQFFK-NNTRLISCAEDKTVRLWDV 92 (134)
Q Consensus 21 ~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~ 92 (134)
.+.. +.|+| |...|++++.||.|++|.+..+. .+...+.+|...|+.+.|+| ..+.|++++.|.+|++||+
T Consensus 629 ~vtD-l~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl 707 (1012)
T KOG1445|consen 629 LVTD-LHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDL 707 (1012)
T ss_pred eeee-cccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeeh
Confidence 3444 99999 88899999999999999987532 23456789999999999999 5678899999999999999
Q ss_pred CCCceeEEEe-cCCCCeEEEEccCCcEEEE-ecCCeEEEEeCCC
Q psy6446 93 SASAEVQKLE-FGAVPNSLEISRDGTTITV-THGSCVTFLDANS 134 (134)
Q Consensus 93 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d~~t 134 (134)
++.+....+. |...|..++|+|+|+.+++ +.||+|++|+.++
T Consensus 708 ~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs 751 (1012)
T KOG1445|consen 708 ANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRS 751 (1012)
T ss_pred hhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCC
Confidence 9988777665 6889999999999999986 7899999998763
No 114
>KOG0643|consensus
Probab=99.79 E-value=4e-18 Score=99.24 Aligned_cols=121 Identities=23% Similarity=0.247 Sum_probs=105.8
Q ss_pred eeEeecC-------CCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeC
Q psy6446 2 GTVWDAV-------SGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKN 74 (134)
Q Consensus 2 i~v~d~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 74 (134)
|.++|++ +.++...+..+...+....|.|.+..|++|..||.|..||++++.........|...|+.++++++
T Consensus 122 v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d 201 (327)
T KOG0643|consen 122 VSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRD 201 (327)
T ss_pred EEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCC
Confidence 5677776 456677776444555559999999999999999999999999987777777789999999999999
Q ss_pred CCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe
Q psy6446 75 NTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT 122 (134)
Q Consensus 75 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 122 (134)
..++++++.|.+.++||..+...++++....++++.+++|....++.+
T Consensus 202 ~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~Vilg 249 (327)
T KOG0643|consen 202 RTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILG 249 (327)
T ss_pred cceEEecccCccceeeeccceeeEEEeeecccccceecccccceEEec
Confidence 999999999999999999999999999999999999999988777665
No 115
>KOG0639|consensus
Probab=99.79 E-value=1.5e-18 Score=108.64 Aligned_cols=132 Identities=20% Similarity=0.242 Sum_probs=114.4
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCe-----------------------
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPT----------------------- 57 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~----------------------- 57 (134)
.|.|||+.+...+..|+++....+|+..+++|..|-+|+.|+.|+.||++++..+.+
T Consensus 532 nI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGM 611 (705)
T KOG0639|consen 532 NIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGM 611 (705)
T ss_pred cEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhhhheecccCCCccceeeec
Confidence 378999999999999997777777799999999999999999999999986432211
Q ss_pred ----------------EEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEE
Q psy6446 58 ----------------VYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITV 121 (134)
Q Consensus 58 ----------------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 121 (134)
.+.-|..-|.++.|.+-|+++++.+.|+.+..|....|..+...+..+.|.+..++-|.+++++
T Consensus 612 ens~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE~SsVlsCDIS~ddkyIVT 691 (705)
T KOG0639|consen 612 ENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISFDDKYIVT 691 (705)
T ss_pred ccCcEEEEecCCccceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeeccccCcceeeeeccCceEEEe
Confidence 2234667799999999999999999999999999999999999989999999999999999999
Q ss_pred e-cCCeEEEEeC
Q psy6446 122 T-HGSCVTFLDA 132 (134)
Q Consensus 122 ~-~~~~i~i~d~ 132 (134)
| +|....+|.+
T Consensus 692 GSGdkkATVYeV 703 (705)
T KOG0639|consen 692 GSGDKKATVYEV 703 (705)
T ss_pred cCCCcceEEEEE
Confidence 7 5678888875
No 116
>KOG2111|consensus
Probab=99.79 E-value=6.3e-17 Score=96.10 Aligned_cols=132 Identities=18% Similarity=0.241 Sum_probs=99.2
Q ss_pred eeEeecC-CCceeeEEeeCCCceeeEEEcc--CCcEEEE-ecCCCeEEEEECCCCCC-CCeEEeCCCCCEeEEEEeeCCC
Q psy6446 2 GTVWDAV-SGEELHSFQHPHIVKSSVHFAT--DSYRLAT-GSNDKNIRIYDLNKPDA-EPTVYRGHSSGIKHVQFFKNNT 76 (134)
Q Consensus 2 i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~-~~~d~~v~i~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~ 76 (134)
|+||... +-+.+..++........++..| +...|+. |..-|.|++-|+..... ......+|...|.+++.+-+|.
T Consensus 115 I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt 194 (346)
T KOG2111|consen 115 IYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGT 194 (346)
T ss_pred EEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCcc
Confidence 5566665 4445555542111111233344 3334443 45579999999987554 3467889999999999999999
Q ss_pred EEEEeeCCCc-EEEEecCCCceeEEEec---CCCCeEEEEccCCcEEEEecC-CeEEEEeCC
Q psy6446 77 RLISCAEDKT-VRLWDVSASAEVQKLEF---GAVPNSLEISRDGTTITVTHG-SCVTFLDAN 133 (134)
Q Consensus 77 ~l~~~~~d~~-i~~~d~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~-~~i~i~d~~ 133 (134)
.++|++..|+ |+|||..++..+..+.. ...+.+++|+|+..++++++| |+++|+.++
T Consensus 195 ~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~ 256 (346)
T KOG2111|consen 195 LVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLR 256 (346)
T ss_pred EEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEee
Confidence 9999999997 89999999999999884 467999999999999999876 999999875
No 117
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.78 E-value=1.7e-16 Score=96.78 Aligned_cols=130 Identities=18% Similarity=0.279 Sum_probs=100.2
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEE-EEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRL-ATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+|++||+.+++.+..+.+...+.. +.|+|+++.+ ++++.++.+++||..++... ..+..+ ..+..+.|+|+++.++
T Consensus 12 ~v~~~d~~t~~~~~~~~~~~~~~~-l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~-~~~~~~-~~~~~~~~~~~g~~l~ 88 (300)
T TIGR03866 12 TISVIDTATLEVTRTFPVGQRPRG-ITLSKDGKLLYVCASDSDTIQVIDLATGEVI-GTLPSG-PDPELFALHPNGKILY 88 (300)
T ss_pred EEEEEECCCCceEEEEECCCCCCc-eEECCCCCEEEEEECCCCeEEEEECCCCcEE-EeccCC-CCccEEEECCCCCEEE
Confidence 478999999999888886555555 9999999876 56778899999999876533 223333 3356789999998776
Q ss_pred Ee-eCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEec-C-CeEEEEeCC
Q psy6446 80 SC-AEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH-G-SCVTFLDAN 133 (134)
Q Consensus 80 ~~-~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-~~i~i~d~~ 133 (134)
++ +.++.+.+||+.+.+.+..+.....+.+++|+|++.+++++. + ..+..||.+
T Consensus 89 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~ 145 (300)
T TIGR03866 89 IANEDDNLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTK 145 (300)
T ss_pred EEcCCCCeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEecCCCeEEEEeCC
Confidence 54 568899999999888877776666678999999999888764 3 457777865
No 118
>KOG0299|consensus
Probab=99.77 E-value=5.6e-18 Score=104.49 Aligned_cols=131 Identities=15% Similarity=0.299 Sum_probs=109.6
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEe
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISC 81 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 81 (134)
|.|||..+.+.++.+.++...+.+++|-.....+++++.|+.+++|+++.... ..++.+|+..|.++.....++.+..|
T Consensus 226 v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~-vetlyGHqd~v~~IdaL~reR~vtVG 304 (479)
T KOG0299|consen 226 VQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSY-VETLYGHQDGVLGIDALSRERCVTVG 304 (479)
T ss_pred EEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHH-HHHHhCCccceeeechhcccceEEec
Confidence 57999999999999996666666699998888999999999999999987543 45678999999999998888888788
Q ss_pred eCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 82 AEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 82 ~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
+.|+++++|++.....+-...+...+.|++|-.+..++..+.+|.|.+|++-
T Consensus 305 grDrT~rlwKi~eesqlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~ 356 (479)
T KOG0299|consen 305 GRDRTVRLWKIPEESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLL 356 (479)
T ss_pred cccceeEEEeccccceeeeeCCCCCeeeEEEecccceeeccCCceEEEeeec
Confidence 8999999999965555544456778999999877666666678999999974
No 119
>KOG4378|consensus
Probab=99.77 E-value=2.9e-17 Score=102.85 Aligned_cols=132 Identities=15% Similarity=0.239 Sum_probs=108.7
Q ss_pred eEeecCCCceeeEEeeC-CCceeeEEEccCCcE-EEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee-CCCEEE
Q psy6446 3 TVWDAVSGEELHSFQHP-HIVKSSVHFATDSYR-LATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK-NNTRLI 79 (134)
Q Consensus 3 ~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~ 79 (134)
-|-.+.++.....|.++ +..+.-+.++|..+. |.+++.+|.|.+||.....+.......|..+...++|+| +...|+
T Consensus 146 iih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~v 225 (673)
T KOG4378|consen 146 IIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLV 225 (673)
T ss_pred EEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEE
Confidence 44555666666667654 444544899996655 567899999999999886666666778999999999999 567788
Q ss_pred EeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
+.+.|..|.+||++..+....+....+...++|.++|.+|++| ..|.|..||++.
T Consensus 226 sVG~Dkki~~yD~~s~~s~~~l~y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~ 281 (673)
T KOG4378|consen 226 SVGYDKKINIYDIRSQASTDRLTYSHPLSTVAFSECGTYLCAGNSKGELIAYDMRS 281 (673)
T ss_pred EecccceEEEeecccccccceeeecCCcceeeecCCceEEEeecCCceEEEEeccc
Confidence 9999999999999988888888889999999999999999998 569999999974
No 120
>KOG0308|consensus
Probab=99.77 E-value=4.2e-17 Score=104.54 Aligned_cols=131 Identities=21% Similarity=0.312 Sum_probs=107.9
Q ss_pred eeEeecCCCc--eeeEE--------e-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEE
Q psy6446 2 GTVWDAVSGE--ELHSF--------Q-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQ 70 (134)
Q Consensus 2 i~v~d~~~~~--~~~~~--------~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~ 70 (134)
|.+||+.++. .+..+ . ++...+-+++.++.|..|++|+..+.+++||.++.++. ..+.+|...|..+.
T Consensus 142 IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~ki-mkLrGHTdNVr~ll 220 (735)
T KOG0308|consen 142 IFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKI-MKLRGHTDNVRVLL 220 (735)
T ss_pred EEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccce-eeeeccccceEEEE
Confidence 7899999772 33322 1 33333444999999999999999999999999997765 45789999999999
Q ss_pred EeeCCCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 71 FFKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 71 ~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
.++||..+++++.||+|++||+...+++.++. |...+.++..+|+=..+.+| .||.|..=|++
T Consensus 221 ~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~ 285 (735)
T KOG0308|consen 221 VNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLR 285 (735)
T ss_pred EcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccC
Confidence 99999999999999999999999999998887 56668999988887777776 68888876665
No 121
>KOG0270|consensus
Probab=99.77 E-value=1.6e-17 Score=102.11 Aligned_cols=109 Identities=18% Similarity=0.316 Sum_probs=89.8
Q ss_pred eEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee-CCCEEEEeeCCCcEEEEecCC-CceeEEE
Q psy6446 25 SVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK-NNTRLISCAEDKTVRLWDVSA-SAEVQKL 101 (134)
Q Consensus 25 ~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~-~~~~~~~ 101 (134)
++.|+. ..+.|++|+.|.+|.+||+.++++. ..+..|.+.|.+++|+| ....|++|+.|+++.+.|++. ...-..+
T Consensus 248 ~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~-~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~w 326 (463)
T KOG0270|consen 248 ALSWNRNFRNVLASGSADKTVKLWDVDTGKPK-SSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEW 326 (463)
T ss_pred HHHhccccceeEEecCCCceEEEEEcCCCCcc-eehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceE
Confidence 378877 4567899999999999999997754 56678999999999999 678899999999999999994 3444556
Q ss_pred ecCCCCeEEEEccCCcE-EEEe-cCCeEEEEeCCC
Q psy6446 102 EFGAVPNSLEISRDGTT-ITVT-HGSCVTFLDANS 134 (134)
Q Consensus 102 ~~~~~v~~~~~~~~~~~-l~~~-~~~~i~i~d~~t 134 (134)
...+.|..++|.|.... ++++ .||+++-+|+|.
T Consensus 327 k~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~ 361 (463)
T KOG0270|consen 327 KFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRN 361 (463)
T ss_pred EeccceEEEEecCCCceeEEEecCCceEEeeecCC
Confidence 67889999999998754 3344 679999999874
No 122
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.77 E-value=4.7e-16 Score=94.90 Aligned_cols=131 Identities=12% Similarity=0.088 Sum_probs=95.9
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEe-cCCCeEEEEECCCCCCCCeEEeCC-------CCCEeEEEEee
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATG-SNDKNIRIYDLNKPDAEPTVYRGH-------SSGIKHVQFFK 73 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~v~i~~~~~~~~~~~~~~~~-------~~~v~~~~~~~ 73 (134)
+.+||..+++.+..+........ +.|+|+++.++++ ..++.+++||+.+++... .+..+ ......+.|+|
T Consensus 139 ~~~~d~~~~~~~~~~~~~~~~~~-~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~s~ 216 (300)
T TIGR03866 139 AHFIDTKTYEIVDNVLVDQRPRF-AEFTADGKELWVSSEIGGTVSVIDVATRKVIK-KITFEIPGVHPEAVQPVGIKLTK 216 (300)
T ss_pred EEEEeCCCCeEEEEEEcCCCccE-EEECCCCCEEEEEcCCCCEEEEEEcCcceeee-eeeecccccccccCCccceEECC
Confidence 45678887777665554444444 8999999988654 568999999998765332 22211 11235688999
Q ss_pred CCCEEEE-eeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe--cCCeEEEEeCCC
Q psy6446 74 NNTRLIS-CAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT--HGSCVTFLDANS 134 (134)
Q Consensus 74 ~~~~l~~-~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~t 134 (134)
+++.++. .+.++.+.+||..+++....+.....+.+++|+|+|.+|+++ .++.|.+||+++
T Consensus 217 dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~ 280 (300)
T TIGR03866 217 DGKTAFVALGPANRVAVVDAKTYEVLDYLLVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAA 280 (300)
T ss_pred CCCEEEEEcCCCCeEEEEECCCCcEEEEEEeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCC
Confidence 9998654 455678999999988877766667788999999999988875 379999999864
No 123
>KOG1063|consensus
Probab=99.77 E-value=1.6e-17 Score=106.92 Aligned_cols=132 Identities=12% Similarity=0.283 Sum_probs=106.4
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCe---EEeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPT---VYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l 78 (134)
|++|+..+...++.++.+...++.++||||+++|++.++|..+.+|.......... ..+.|...|.+.+|+|++.++
T Consensus 554 I~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~F 633 (764)
T KOG1063|consen 554 IRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYF 633 (764)
T ss_pred EEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCccccee
Confidence 78999999888888886666666699999999999999999999999865433222 257899999999999999999
Q ss_pred EEeeCCCcEEEEecCCC--ceeEE---EecCCCCeEEEEccC----C-cEEEEe-cCCeEEEEeCC
Q psy6446 79 ISCAEDKTVRLWDVSAS--AEVQK---LEFGAVPNSLEISRD----G-TTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~--~~~~~---~~~~~~v~~~~~~~~----~-~~l~~~-~~~~i~i~d~~ 133 (134)
+|+++|..+++|..... +.+.. +++..+++.+++.|- . ..+++| ..|.|.+|...
T Consensus 634 aTaSRDK~VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~ 699 (764)
T KOG1063|consen 634 ATASRDKKVKVWEEPDLRDKYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRK 699 (764)
T ss_pred EEecCCceEEEEeccCchhhhhhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEecc
Confidence 99999999999998877 43333 346788888888762 2 256667 56999999843
No 124
>KOG0301|consensus
Probab=99.77 E-value=5e-17 Score=104.71 Aligned_cols=126 Identities=20% Similarity=0.329 Sum_probs=106.8
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|++|.- ++.+++|.++...+..+++-++ ..|+++++||.|+.|++. +..+ ....+|..-+.+++..++++.+++
T Consensus 162 tIklWk~--~~~l~tf~gHtD~VRgL~vl~~-~~flScsNDg~Ir~w~~~-ge~l-~~~~ghtn~vYsis~~~~~~~Ivs 236 (745)
T KOG0301|consen 162 TIKLWKG--GTLLKTFSGHTDCVRGLAVLDD-SHFLSCSNDGSIRLWDLD-GEVL-LEMHGHTNFVYSISMALSDGLIVS 236 (745)
T ss_pred eeeeccC--CchhhhhccchhheeeeEEecC-CCeEeecCCceEEEEecc-Ccee-eeeeccceEEEEEEecCCCCeEEE
Confidence 5788874 7888899977777766888765 468899999999999994 4444 467899999999998889999999
Q ss_pred eeCCCcEEEEecCCCceeEEEecCC-CCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLEFGA-VPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
+++|+++++|+.. .+.+.+.++. .+.++++-++|..++.++||.|+||...
T Consensus 237 ~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgDIvvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 237 TGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGDIVVGGSDGRVRVFTVD 288 (745)
T ss_pred ecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCCEEEeccCceEEEEEec
Confidence 9999999999865 7888888765 8999999999999999999999999754
No 125
>KOG0267|consensus
Probab=99.77 E-value=1.3e-18 Score=112.35 Aligned_cols=129 Identities=22% Similarity=0.360 Sum_probs=108.7
Q ss_pred EeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeC
Q psy6446 4 VWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAE 83 (134)
Q Consensus 4 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 83 (134)
+|....-..+..+.++...+.++.|+++..+|++|+.+|.|++||+...+.. +.+.+|...+..++|+|-+.+.+.++.
T Consensus 54 L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~v-rtLtgh~~~~~sv~f~P~~~~~a~gSt 132 (825)
T KOG0267|consen 54 LWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIV-RTLTGHLLNITSVDFHPYGEFFASGST 132 (825)
T ss_pred cccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhh-hhhhccccCcceeeeccceEEeccccc
Confidence 4555444455566766667777999999999999999999999999986644 578899999999999999999999999
Q ss_pred CCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 84 DKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 84 d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
|..+.+||++...+...+. +...+..+.|+|+|++++.+ .|..++|||..
T Consensus 133 dtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~ 184 (825)
T KOG0267|consen 133 DTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLT 184 (825)
T ss_pred cccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeeccc
Confidence 9999999999777777666 55668899999999999987 46999999973
No 126
>KOG1034|consensus
Probab=99.77 E-value=7e-17 Score=96.42 Aligned_cols=114 Identities=24% Similarity=0.389 Sum_probs=96.8
Q ss_pred eCCCceeeEEEccC----CcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeC-CCEEEEeeCCCcEEEEec
Q psy6446 18 HPHIVKSSVHFATD----SYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKN-NTRLISCAEDKTVRLWDV 92 (134)
Q Consensus 18 ~~~~~~~~~~~~~~----~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~ 92 (134)
+++...+ ++|+-+ ..++++|+.-|.|++.|+.+.+.. ..+.+|.+.|+.+.+.|+ .+++++++.|..|++|++
T Consensus 88 ~~Esfyt-csw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~-~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI 165 (385)
T KOG1034|consen 88 HDESFYT-CSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCS-KNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNI 165 (385)
T ss_pred CCcceEE-EEEEecCCCCCeeEEeecceeEEEEEecchhhhc-cceeccCccchhhhcCCCCCcEEEEecCCceEEEEec
Confidence 3344455 777653 347888889999999999886644 568899999999999995 578899999999999999
Q ss_pred CCCceeEEEe----cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 93 SASAEVQKLE----FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 93 ~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
++..++..+. |...|.++.|+++|.+++++ .|..|.+|++.
T Consensus 166 ~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~ 211 (385)
T KOG1034|consen 166 QTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLN 211 (385)
T ss_pred cCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecC
Confidence 9999999886 57889999999999998875 79999999986
No 127
>KOG2096|consensus
Probab=99.77 E-value=4.2e-17 Score=97.26 Aligned_cols=132 Identities=20% Similarity=0.363 Sum_probs=102.7
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCC-------CCCeEEeCCCCCEeEEEEee
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPD-------AEPTVYRGHSSGIKHVQFFK 73 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~-------~~~~~~~~~~~~v~~~~~~~ 73 (134)
+|.+|++. |+.+..+.....-..-.+.+|+|+++++++.--.|++|.+--.+ .-...+++|...|..++|++
T Consensus 210 ~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn 288 (420)
T KOG2096|consen 210 KICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSN 288 (420)
T ss_pred cEEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCC
Confidence 47899998 99998887444444448899999999999988899999863211 11235789999999999999
Q ss_pred CCCEEEEeeCCCcEEEEecCC----Cc---eeEEEe-----cCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 74 NNTRLISCAEDKTVRLWDVSA----SA---EVQKLE-----FGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 74 ~~~~l~~~~~d~~i~~~d~~~----~~---~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
+.+.+++.+.||.+++||+.- ++ .++... ..+....+.++|+|..++.+....+++|..+
T Consensus 289 ~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~se 360 (420)
T KOG2096|consen 289 SSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFASE 360 (420)
T ss_pred CcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEEEcc
Confidence 999999999999999999752 11 122111 2345568999999999999988889988765
No 128
>KOG1188|consensus
Probab=99.76 E-value=2.9e-17 Score=98.28 Aligned_cols=133 Identities=17% Similarity=0.336 Sum_probs=101.9
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEcc--CCcEEEEecCCCeEEEEECCCCCCCCeE-EeCCC-CCEeEEEEeeCCC
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFAT--DSYRLATGSNDKNIRIYDLNKPDAEPTV-YRGHS-SGIKHVQFFKNNT 76 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~d~~v~i~~~~~~~~~~~~-~~~~~-~~v~~~~~~~~~~ 76 (134)
+|++||..+++.+..++++...++-++|.. .+..+.+++.||.|++||++...+..+. ...++ .+..+++.+-+++
T Consensus 51 sv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ 130 (376)
T KOG1188|consen 51 SVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKN 130 (376)
T ss_pred eEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCC
Confidence 589999999999999997666666688876 4677899999999999999986554433 33444 3556666665677
Q ss_pred EEEEeeC----CCcEEEEecCCCce-eEEEe--cCCCCeEEEEccCC-cEEEEe-cCCeEEEEeCC
Q psy6446 77 RLISCAE----DKTVRLWDVSASAE-VQKLE--FGAVPNSLEISRDG-TTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 77 ~l~~~~~----d~~i~~~d~~~~~~-~~~~~--~~~~v~~~~~~~~~-~~l~~~-~~~~i~i~d~~ 133 (134)
.+++|.+ +-.+.+||.+..+. +..+. |...|++++|+|.. ..|++| .||-|.+||++
T Consensus 131 ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~ 196 (376)
T KOG1188|consen 131 IIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTK 196 (376)
T ss_pred eEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecC
Confidence 7777654 56799999998776 44443 67889999999977 455565 58999999986
No 129
>KOG1332|consensus
Probab=99.75 E-value=1.6e-17 Score=95.73 Aligned_cols=113 Identities=21% Similarity=0.269 Sum_probs=91.2
Q ss_pred CceeeEEEccCCcEEEEecCCCeEEEEECCCCC--CCCeEEeCCCCCEeEEEEee--CCCEEEEeeCCCcEEEEecCCCc
Q psy6446 21 IVKSSVHFATDSYRLATGSNDKNIRIYDLNKPD--AEPTVYRGHSSGIKHVQFFK--NNTRLISCAEDKTVRLWDVSASA 96 (134)
Q Consensus 21 ~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~--~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~ 96 (134)
..+..+..+-.|++|++++.|+.|+|+..+... .+...+.+|.++|..++|.. -|..|++++.||.+.||.-.+++
T Consensus 12 D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~ 91 (299)
T KOG1332|consen 12 DMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGR 91 (299)
T ss_pred hhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCc
Confidence 333336666789999999999999999998755 45567899999999999965 78999999999999999988875
Q ss_pred eeEEEe---cCCCCeEEEEccCC--cEEEE-ecCCeEEEEeCC
Q psy6446 97 EVQKLE---FGAVPNSLEISRDG--TTITV-THGSCVTFLDAN 133 (134)
Q Consensus 97 ~~~~~~---~~~~v~~~~~~~~~--~~l~~-~~~~~i~i~d~~ 133 (134)
-.+... |...+++++|.|++ ..|++ ++||.|.+.+.+
T Consensus 92 w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~ 134 (299)
T KOG1332|consen 92 WTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYD 134 (299)
T ss_pred hhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEc
Confidence 433333 57889999999986 35555 479999998765
No 130
>KOG0641|consensus
Probab=99.75 E-value=5.9e-16 Score=88.85 Aligned_cols=132 Identities=19% Similarity=0.269 Sum_probs=106.6
Q ss_pred CeeEeecCCCceeeEEe---eC----CCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee
Q psy6446 1 MGTVWDAVSGEELHSFQ---HP----HIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK 73 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~ 73 (134)
||+.||++-..++.++. +. ...+.++++.|.|++|++|..|....+||++.+. ..+.+..|...|.++.|+|
T Consensus 205 tirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r-~iq~f~phsadir~vrfsp 283 (350)
T KOG0641|consen 205 TIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGR-MIQRFHPHSADIRCVRFSP 283 (350)
T ss_pred eEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCc-eeeeeCCCccceeEEEeCC
Confidence 68999999888887775 21 2456669999999999999999999999999765 4567889999999999999
Q ss_pred CCCEEEEeeCCCcEEEEecCCCc--e---eEEEecCCCCeEEEEccCCc-EEEEecCCeEEEEeCC
Q psy6446 74 NNTRLISCAEDKTVRLWDVSASA--E---VQKLEFGAVPNSLEISRDGT-TITVTHGSCVTFLDAN 133 (134)
Q Consensus 74 ~~~~l~~~~~d~~i~~~d~~~~~--~---~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~i~i~d~~ 133 (134)
...++++++.|..|++-|++..- . ...-.+...+-.+.|+|..- ++.++.|.++.+|-+.
T Consensus 284 ~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 284 GAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred CceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 99999999999999999987421 1 12223677788899999874 4445678999999764
No 131
>KOG0641|consensus
Probab=99.75 E-value=4.3e-16 Score=89.40 Aligned_cols=130 Identities=19% Similarity=0.257 Sum_probs=103.2
Q ss_pred eeEeecCCCceeeEEeeCCC-ceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeE---EeC---CCCCEeEEEEeeC
Q psy6446 2 GTVWDAVSGEELHSFQHPHI-VKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTV---YRG---HSSGIKHVQFFKN 74 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~---~~~---~~~~v~~~~~~~~ 74 (134)
|++=|..+|+..+.+.++.. +..-..| ++-.+++|+.|.+|++||++-..+.... +++ ....|..++..|.
T Consensus 165 iy~tdc~~g~~~~a~sghtghilalysw--n~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdps 242 (350)
T KOG0641|consen 165 IYITDCGRGQGFHALSGHTGHILALYSW--NGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPS 242 (350)
T ss_pred EEEeecCCCCcceeecCCcccEEEEEEe--cCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCC
Confidence 55667778888888874444 4443344 6889999999999999999875443211 111 1257899999999
Q ss_pred CCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 75 NTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 75 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
|+.|++|-.|....+||++.++.++.+. +...|+|+.|+|...+++++ .|..|++=|+.
T Consensus 243 grll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlq 303 (350)
T KOG0641|consen 243 GRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQ 303 (350)
T ss_pred cceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecc
Confidence 9999999999999999999999998876 67899999999999998876 68999998864
No 132
>KOG0973|consensus
Probab=99.74 E-value=3.1e-17 Score=109.50 Aligned_cols=110 Identities=22% Similarity=0.267 Sum_probs=93.5
Q ss_pred ceeeEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEE
Q psy6446 11 EELHSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRL 89 (134)
Q Consensus 11 ~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 89 (134)
++...+. |...+.. +.|+|++.+|++++.|+.|.+|+..+. .....+.+|.+.|..+.|.|-|+++++-+.|++|++
T Consensus 120 k~~~~l~~H~~DV~D-v~Wsp~~~~lvS~s~DnsViiwn~~tF-~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikv 197 (942)
T KOG0973|consen 120 KVVSILRGHDSDVLD-VNWSPDDSLLVSVSLDNSVIIWNAKTF-ELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKV 197 (942)
T ss_pred eEEEEEecCCCccce-eccCCCccEEEEecccceEEEEccccc-eeeeeeecccccccceEECCccCeeeeecCCceEEE
Confidence 3566666 6666666 999999999999999999999999997 455788999999999999999999999999999999
Q ss_pred EecCCCceeEEEec-------CCCCeEEEEccCCcEEEEe
Q psy6446 90 WDVSASAEVQKLEF-------GAVPNSLEISRDGTTITVT 122 (134)
Q Consensus 90 ~d~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~ 122 (134)
|++.+......+.. ......+.|+|||++|++.
T Consensus 198 wrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~ 237 (942)
T KOG0973|consen 198 WRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASP 237 (942)
T ss_pred EEcccceeeEeeccchhhCCCcceeeecccCCCcCeecch
Confidence 99877655555542 3456899999999999974
No 133
>KOG1007|consensus
Probab=99.74 E-value=7.5e-17 Score=95.05 Aligned_cols=131 Identities=21% Similarity=0.248 Sum_probs=104.1
Q ss_pred CeeEeecCCCceeeEEe--eCCCceeeEEEccCCc-EEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee-CCC
Q psy6446 1 MGTVWDAVSGEELHSFQ--HPHIVKSSVHFATDSY-RLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK-NNT 76 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 76 (134)
++..||+++.++...++ |...+.. +.|+|+.+ .|++++.||.|++||.+..+.+...+.+|...|.++.|+| ..+
T Consensus 194 tl~~~D~RT~~~~~sI~dAHgq~vrd-lDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdq 272 (370)
T KOG1007|consen 194 TLQFWDLRTMKKNNSIEDAHGQRVRD-LDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQ 272 (370)
T ss_pred cEEEEEccchhhhcchhhhhcceeee-ccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccce
Confidence 57889999998888887 5556666 99999765 4788999999999999998888888999999999999999 677
Q ss_pred EEEEeeCCCcEEEEecCCCc---------------------e--------eEEEe-cCCCCeEEEEccCCcEEEEe--cC
Q psy6446 77 RLISCAEDKTVRLWDVSASA---------------------E--------VQKLE-FGAVPNSLEISRDGTTITVT--HG 124 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~---------------------~--------~~~~~-~~~~v~~~~~~~~~~~l~~~--~~ 124 (134)
.+++++.|..+.+|....-. . +.++. ++..|.+++|+.-..+++++ .|
T Consensus 273 LiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYD 352 (370)
T KOG1007|consen 273 LILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYD 352 (370)
T ss_pred EEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccC
Confidence 88899999999998543211 0 11111 45679999999988888865 68
Q ss_pred CeEEEEeC
Q psy6446 125 SCVTFLDA 132 (134)
Q Consensus 125 ~~i~i~d~ 132 (134)
|++.|=.+
T Consensus 353 GRviIs~V 360 (370)
T KOG1007|consen 353 GRVIISSV 360 (370)
T ss_pred ceEEeecC
Confidence 98877443
No 134
>KOG1274|consensus
Probab=99.74 E-value=2.5e-16 Score=104.10 Aligned_cols=132 Identities=18% Similarity=0.264 Sum_probs=105.4
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|.+|...+++.-..+..-.-.+.+++|+.+|++++.|+.|-.|++-++...... ..+++|.++|.++.|+|++++|++
T Consensus 77 tv~~y~fps~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~-~~lrgh~apVl~l~~~p~~~fLAv 155 (933)
T KOG1274|consen 77 TVLRYKFPSGEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQE-KVLRGHDAPVLQLSYDPKGNFLAV 155 (933)
T ss_pred eEEEeeCCCCCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchh-eeecccCCceeeeeEcCCCCEEEE
Confidence 3566666666554344333334455999999999999999999999999876544 578999999999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEEEec---------CCCCeEEEEccCC-cEEEEecCCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLEF---------GAVPNSLEISRDG-TTITVTHGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~~---------~~~v~~~~~~~~~-~~l~~~~~~~i~i~d~~ 133 (134)
.+-||.+++||+.++.+...+.. ...+..++|+|+| .+++.+.++.|.+|+.+
T Consensus 156 ss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~ 218 (933)
T KOG1274|consen 156 SSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRK 218 (933)
T ss_pred EecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccC
Confidence 99999999999999887766651 2345788999995 56666889999999865
No 135
>KOG0303|consensus
Probab=99.73 E-value=1.7e-16 Score=96.88 Aligned_cols=131 Identities=19% Similarity=0.260 Sum_probs=106.0
Q ss_pred CeeEeecCCC-------ceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEe
Q psy6446 1 MGTVWDAVSG-------EELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFF 72 (134)
Q Consensus 1 ~i~v~d~~~~-------~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~ 72 (134)
+|.||++..+ +++..+.++..-+..+.|+| -.+.|++++.|..|.+|++.++..... +. |...|.++.|+
T Consensus 105 ~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~-l~-hpd~i~S~sfn 182 (472)
T KOG0303|consen 105 KVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALIT-LD-HPDMVYSMSFN 182 (472)
T ss_pred eEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeee-cC-CCCeEEEEEec
Confidence 5789998643 35667776656565599999 567889999999999999999876653 44 99999999999
Q ss_pred eCCCEEEEeeCCCcEEEEecCCCceeEEEe-c-CCCCeEEEEccCCcEEEEe----cCCeEEEEeCC
Q psy6446 73 KNNTRLISCAEDKTVRLWDVSASAEVQKLE-F-GAVPNSLEISRDGTTITVT----HGSCVTFLDAN 133 (134)
Q Consensus 73 ~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~-~~~v~~~~~~~~~~~l~~~----~~~~i~i~d~~ 133 (134)
.||..+++.+.|..|++||.++++.+..-. | +.....+.|-.+|..+.+| ++.++.+||.+
T Consensus 183 ~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~ 249 (472)
T KOG0303|consen 183 RDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPN 249 (472)
T ss_pred cCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeeccccccccceeccCcc
Confidence 999999999999999999999999887663 3 4456778888888866665 35899999864
No 136
>KOG2055|consensus
Probab=99.73 E-value=4.8e-16 Score=96.34 Aligned_cols=130 Identities=15% Similarity=0.210 Sum_probs=105.3
Q ss_pred eeEeecCCCceeeEEe---eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQ---HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
++.||+.+.+..+.-. .....+....++|++++|+..+..|.|.+....++..+ ..++ ..+.|..+.|+.+++.|
T Consensus 282 ~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli-~s~K-ieG~v~~~~fsSdsk~l 359 (514)
T KOG2055|consen 282 LYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELI-TSFK-IEGVVSDFTFSSDSKEL 359 (514)
T ss_pred EEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhh-heee-eccEEeeEEEecCCcEE
Confidence 4789998877643322 33344445888999999999999999999988875533 3443 45789999999999999
Q ss_pred EEeeCCCcEEEEecCCCceeEEEecCCCC--eEEEEccCCcEEEEecC-CeEEEEeCC
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLEFGAVP--NSLEISRDGTTITVTHG-SCVTFLDAN 133 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~-~~i~i~d~~ 133 (134)
+.++.+|.|.+||++...++..+.-.+.+ .+++.++++.++++|++ |.|.|||.+
T Consensus 360 ~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~ 417 (514)
T KOG2055|consen 360 LASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGN 417 (514)
T ss_pred EEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccc
Confidence 99999999999999999999888876665 56777899999999876 999999965
No 137
>KOG2055|consensus
Probab=99.73 E-value=9.7e-17 Score=99.34 Aligned_cols=132 Identities=20% Similarity=0.262 Sum_probs=103.4
Q ss_pred eeEeecCCCceeeEEeeCCCce-eeEEEccCCcEEEEecCCCeEEEEECCCC-----CCCCeEEeCCCCCEeEEEEeeCC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVK-SSVHFATDSYRLATGSNDKNIRIYDLNKP-----DAEPTVYRGHSSGIKHVQFFKNN 75 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~d~~v~i~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~ 75 (134)
|.+||+....+++.+...+.+. ..++.++++.+||+|+..|.|.|||.++- ..+...+..-...|+.++|+++.
T Consensus 368 V~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~ 447 (514)
T KOG2055|consen 368 VYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDA 447 (514)
T ss_pred EEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcch
Confidence 7899999999999987444432 33788899999999999999999997641 22333334455789999999999
Q ss_pred CEEEEeeC--CCcEEEEecCCCceeEEEecC----CCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 76 TRLISCAE--DKTVRLWDVSASAEVQKLEFG----AVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 76 ~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+.|+.++. ...+++-.+........++.. +.++|++|+|.+-+++.| .+|++.+|-+.
T Consensus 448 qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 448 QILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred hhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence 99987775 467888888777766666632 468999999999999998 46999999864
No 138
>KOG0268|consensus
Probab=99.73 E-value=4.8e-17 Score=98.24 Aligned_cols=130 Identities=16% Similarity=0.259 Sum_probs=103.9
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
|.|||.....++..+.-....+.++.|+| ....|+++..|+.|.+||+++..++.... ..-.-+.++|+|++-.+.+
T Consensus 169 i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi--~~mRTN~IswnPeafnF~~ 246 (433)
T KOG0268|consen 169 IDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVI--LTMRTNTICWNPEAFNFVA 246 (433)
T ss_pred eeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceee--eeccccceecCccccceee
Confidence 67999998899999984445555599999 45567778899999999999977655433 2345688999997778889
Q ss_pred eeCCCcEEEEecCCCceeEEEe--cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE--FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+++|..+..+|++......... |.+.|..+.|+|.|+-++++ .|.+|+||.++
T Consensus 247 a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~ 302 (433)
T KOG0268|consen 247 ANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVN 302 (433)
T ss_pred ccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecC
Confidence 9999999999998765443332 67889999999999888875 69999999864
No 139
>KOG1009|consensus
Probab=99.72 E-value=3.8e-17 Score=99.63 Aligned_cols=129 Identities=20% Similarity=0.313 Sum_probs=102.1
Q ss_pred eeEeecCCCce---------eeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECC--------C-----CC--CCCe
Q psy6446 2 GTVWDAVSGEE---------LHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLN--------K-----PD--AEPT 57 (134)
Q Consensus 2 i~v~d~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~--------~-----~~--~~~~ 57 (134)
|++|-+..+.+ +..+.++...++++.|+|+|..|++|+.+|.+.+|... + .+ ....
T Consensus 38 iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k 117 (434)
T KOG1009|consen 38 IRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKK 117 (434)
T ss_pred eeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEE
Confidence 67887754322 33444667777779999999999999999999999876 2 00 1123
Q ss_pred EEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEE-ecCCeEEEE
Q psy6446 58 VYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITV-THGSCVTFL 130 (134)
Q Consensus 58 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~~~~i~i~ 130 (134)
.+.+|...+..++|+|+++++++++.|+.+++||+..|+....+. +...+..++|+|.+++++. +.|...+.+
T Consensus 118 ~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~ 192 (434)
T KOG1009|consen 118 VLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGF 192 (434)
T ss_pred EecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCccccee
Confidence 456899999999999999999999999999999999999988876 6788999999999998886 455544443
No 140
>KOG1188|consensus
Probab=99.72 E-value=2e-16 Score=94.81 Aligned_cols=133 Identities=15% Similarity=0.271 Sum_probs=103.1
Q ss_pred CeeEeecCCCceeeEEe---eCCCceeeEEEccCCcEEEEecC----CCeEEEEECCCCCC-CCeEEeCCCCCEeEEEEe
Q psy6446 1 MGTVWDAVSGEELHSFQ---HPHIVKSSVHFATDSYRLATGSN----DKNIRIYDLNKPDA-EPTVYRGHSSGIKHVQFF 72 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~----d~~v~i~~~~~~~~-~~~~~~~~~~~v~~~~~~ 72 (134)
+|++||+++......+. ++.....|++-+-.++.+++|.. +-.+.+||.++.+. +......|...|++++|+
T Consensus 95 ~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFH 174 (376)
T KOG1188|consen 95 TVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFH 174 (376)
T ss_pred eEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEec
Confidence 58999999877666554 33335555666657778888754 56799999998776 444457899999999999
Q ss_pred e-CCCEEEEeeCCCcEEEEecCCCce----eEEEecCCCCeEEEEccCC--cEEEEecCCeEEEEeCC
Q psy6446 73 K-NNTRLISCAEDKTVRLWDVSASAE----VQKLEFGAVPNSLEISRDG--TTITVTHGSCVTFLDAN 133 (134)
Q Consensus 73 ~-~~~~l~~~~~d~~i~~~d~~~~~~----~~~~~~~~~v~~~~~~~~~--~~l~~~~~~~i~i~d~~ 133 (134)
| +.+.|++|+.||.+.+||+..... ...+.+.+.|.++.|..++ +.++.+......+|+++
T Consensus 175 P~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele 242 (376)
T KOG1188|consen 175 PSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELE 242 (376)
T ss_pred CCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEcc
Confidence 9 678899999999999999976533 3344467789999999988 66666788999999875
No 141
>KOG2048|consensus
Probab=99.72 E-value=1.5e-15 Score=97.76 Aligned_cols=133 Identities=17% Similarity=0.226 Sum_probs=105.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCC-eEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEP-TVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+|.-||+.+++++..++.....+.+++.+|.+..++.|+.||.+..++...+.... ..+....+.+.+++|+|++..++
T Consensus 91 ~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~ 170 (691)
T KOG2048|consen 91 SITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIA 170 (691)
T ss_pred eEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEE
Confidence 47789999999999999888889889999999999999999988888776654222 22334568899999999999999
Q ss_pred EeeCCCcEEEEecCCCceeEEEe-----c----CCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLE-----F----GAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~-----~----~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
+|+.||.|++||...+....... . ...|.++.|-.++..+..-+.|+|.+||..
T Consensus 171 ~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~ 233 (691)
T KOG2048|consen 171 GGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIASGDSAGTVTFWDSI 233 (691)
T ss_pred ecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCcEEEecCCceEEEEccc
Confidence 99999999999999888766222 1 234677887766554444467999999974
No 142
>KOG0321|consensus
Probab=99.72 E-value=2.7e-16 Score=100.75 Aligned_cols=134 Identities=19% Similarity=0.287 Sum_probs=94.1
Q ss_pred CeeEeecCCCceeeE--EeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCC-------------------CC--
Q psy6446 1 MGTVWDAVSGEELHS--FQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDA-------------------EP-- 56 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~-------------------~~-- 56 (134)
|++.||+.+.+++.. +-++..-+.+++|.| +...|++|+.||.+.|||++.... +.
T Consensus 123 T~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp 202 (720)
T KOG0321|consen 123 TIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKP 202 (720)
T ss_pred eeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCch
Confidence 689999998888765 444444444499999 667889999999999999873220 00
Q ss_pred -----eEEeCCCCCEeE---EEEeeCCCEEEEeeC-CCcEEEEecCCCceeEEEe---------c---CCCCeEEEEccC
Q psy6446 57 -----TVYRGHSSGIKH---VQFFKNNTRLISCAE-DKTVRLWDVSASAEVQKLE---------F---GAVPNSLEISRD 115 (134)
Q Consensus 57 -----~~~~~~~~~v~~---~~~~~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~---------~---~~~v~~~~~~~~ 115 (134)
...+.+...+.+ +-+..|...|++++. |+.|++||++......... + ...+.++..+..
T Consensus 203 ~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDss 282 (720)
T KOG0321|consen 203 LKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSS 282 (720)
T ss_pred hhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCC
Confidence 011234445555 555668889998887 9999999998765433222 1 124567777888
Q ss_pred CcEEEE-ecCCeEEEEeCCC
Q psy6446 116 GTTITV-THGSCVTFLDANS 134 (134)
Q Consensus 116 ~~~l~~-~~~~~i~i~d~~t 134 (134)
|.++++ +.|+.|++||+.+
T Consensus 283 Gt~L~AsCtD~sIy~ynm~s 302 (720)
T KOG0321|consen 283 GTYLFASCTDNSIYFYNMRS 302 (720)
T ss_pred CCeEEEEecCCcEEEEeccc
Confidence 877765 5899999999864
No 143
>KOG1332|consensus
Probab=99.71 E-value=1.2e-15 Score=88.06 Aligned_cols=133 Identities=14% Similarity=0.110 Sum_probs=100.6
Q ss_pred CeeEeecCCC---ceeeEEeeCCCceeeEEEcc--CCcEEEEecCCCeEEEEECCCCCC-CCeEEeCCCCCEeEEEEeeC
Q psy6446 1 MGTVWDAVSG---EELHSFQHPHIVKSSVHFAT--DSYRLATGSNDKNIRIYDLNKPDA-EPTVYRGHSSGIKHVQFFKN 74 (134)
Q Consensus 1 ~i~v~d~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~d~~v~i~~~~~~~~-~~~~~~~~~~~v~~~~~~~~ 74 (134)
+|+|+..++. +++.++.++...+..++|.+ .|+.|++++.||.|.||.-..+.- .......|...|++++|.|+
T Consensus 34 tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~waph 113 (299)
T KOG1332|consen 34 TVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPH 113 (299)
T ss_pred cEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeeccccc
Confidence 5889998754 35677886666666688866 899999999999999999877531 12345679999999999995
Q ss_pred --CCEEEEeeCCCcEEEEecCCC-c-ee--EEEecCCCCeEEEEccC---C-----------cEEEEe-cCCeEEEEeCC
Q psy6446 75 --NTRLISCAEDKTVRLWDVSAS-A-EV--QKLEFGAVPNSLEISRD---G-----------TTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 75 --~~~l~~~~~d~~i~~~d~~~~-~-~~--~~~~~~~~v~~~~~~~~---~-----------~~l~~~-~~~~i~i~d~~ 133 (134)
|-.|+.++.||.|.+.+++.. . .. -...|...+++++|.|- | +.|+++ .|+.|+||+..
T Consensus 114 eygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~ 193 (299)
T KOG1332|consen 114 EYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFD 193 (299)
T ss_pred ccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecC
Confidence 456788999999999998764 1 11 12226778899999985 3 346654 78999999865
No 144
>KOG0301|consensus
Probab=99.70 E-value=2.1e-16 Score=101.94 Aligned_cols=126 Identities=17% Similarity=0.308 Sum_probs=108.1
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|.+|......++..+.++...++|+....++. +++||.|.++++|..... ...+.+|...|.++..-|++ .++|
T Consensus 82 ~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~~l---~~~l~gH~asVWAv~~l~e~-~~vT 156 (745)
T KOG0301|consen 82 TIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIGEL---VYSLQGHTASVWAVASLPEN-TYVT 156 (745)
T ss_pred eEEEEecCCCCchhhhhccccceeeeecCCcCc-eEecccccceEEecchhh---hcccCCcchheeeeeecCCC-cEEe
Confidence 467899999999999997777777688777776 999999999999987652 23478999999999999877 8899
Q ss_pred eeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
|+.|.+|++|.- ++.++++. |...|+.+++-+++.++.++.||.|+.|++.
T Consensus 157 gsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~~ 208 (745)
T KOG0301|consen 157 GSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDLD 208 (745)
T ss_pred ccCcceeeeccC--CchhhhhccchhheeeeEEecCCCeEeecCCceEEEEecc
Confidence 999999999964 66777776 6788999999999999999999999999973
No 145
>KOG0646|consensus
Probab=99.70 E-value=5.4e-16 Score=96.01 Aligned_cols=131 Identities=15% Similarity=0.275 Sum_probs=98.4
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEe
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISC 81 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 81 (134)
|.+|.+..........--.+++.|++-+|+|.+++.|...|.+++|.+.++..+ ..+.+|...|+++.|+.|+.+++++
T Consensus 63 l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL-~v~~aHYQ~ITcL~fs~dgs~iiTg 141 (476)
T KOG0646|consen 63 LHVWEILKKDQVVQYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILL-NVLSAHYQSITCLKFSDDGSHIITG 141 (476)
T ss_pred ccccccCchhhhhhhcccccceeeeecCCCceEEEeecccCcEEEEEeccccHH-HHHHhhccceeEEEEeCCCcEEEec
Confidence 456666544443322222234555999999999999989999999999997754 5678999999999999999999999
Q ss_pred eCCCcEEEEecCC---------CceeEEEe-cCCCCeEEEEccCC--cEEE-EecCCeEEEEeCC
Q psy6446 82 AEDKTVRLWDVSA---------SAEVQKLE-FGAVPNSLEISRDG--TTIT-VTHGSCVTFLDAN 133 (134)
Q Consensus 82 ~~d~~i~~~d~~~---------~~~~~~~~-~~~~v~~~~~~~~~--~~l~-~~~~~~i~i~d~~ 133 (134)
+.||.|.+|++.. .++...+. |.-+|..+...+.| ..++ ++.|.++++||+.
T Consensus 142 skDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS 206 (476)
T KOG0646|consen 142 SKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLS 206 (476)
T ss_pred CCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEec
Confidence 9999999998642 23344443 45678888877653 3444 5689999999974
No 146
>KOG0322|consensus
Probab=99.70 E-value=3.1e-16 Score=91.36 Aligned_cols=130 Identities=18% Similarity=0.311 Sum_probs=101.3
Q ss_pred eeEeecCCCceeeEE----------e-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCC---CCCeEEeCCCCCEe
Q psy6446 2 GTVWDAVSGEELHSF----------Q-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPD---AEPTVYRGHSSGIK 67 (134)
Q Consensus 2 i~v~d~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~---~~~~~~~~~~~~v~ 67 (134)
+.+||+.++..+..+ . |..++.+ +.+.+.-..=++|+.+-.+..|.++... .......-....+.
T Consensus 177 vv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvls-ldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~ 255 (323)
T KOG0322|consen 177 VVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLS-LDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVS 255 (323)
T ss_pred EEEEEccCCceeeccccccccccchhhccCccee-eeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCCcc
Confidence 678999887333222 2 5566666 8888755556778888888889887532 12222333456789
Q ss_pred EEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeC
Q psy6446 68 HVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 68 ~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~ 132 (134)
.+...||++.+++++.|+.|++|..++.+++..+. |...+++++|+|+...++++ .|++|.+|++
T Consensus 256 gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 256 GVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred ceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 99999999999999999999999999999998887 57889999999998888865 7899999986
No 147
>KOG1273|consensus
Probab=99.69 E-value=1.9e-15 Score=90.20 Aligned_cols=131 Identities=15% Similarity=0.147 Sum_probs=95.3
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCC-CEEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNN-TRLIS 80 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~ 80 (134)
|.|||+.+...-+.+..+...+++++|+++|+.|+++|.|..+.+||+..+....+ + ....+|....|+|.. +..+.
T Consensus 47 vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~r-i-rf~spv~~~q~hp~k~n~~va 124 (405)
T KOG1273|consen 47 VVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKR-I-RFDSPVWGAQWHPRKRNKCVA 124 (405)
T ss_pred EEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeE-E-EccCccceeeeccccCCeEEE
Confidence 67999999888888887777777799999999999999999999999999875443 2 256789999999943 44444
Q ss_pred eeCCCcEEEEecCCCceeEEEe-----cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE-----FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
.-.+..-.+-++..++....-. ......+..|++.|+++.+| +.|.+.+||.+|
T Consensus 125 ~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t 184 (405)
T KOG1273|consen 125 TIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAET 184 (405)
T ss_pred EEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecch
Confidence 4444445555555433222111 11223455799999999998 569999999865
No 148
>KOG2048|consensus
Probab=99.69 E-value=1.1e-14 Score=93.80 Aligned_cols=132 Identities=17% Similarity=0.138 Sum_probs=105.0
Q ss_pred CeeEeecCCCcee-eEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGEEL-HSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
+|.+|++..+-.. ..+. +.+.-+..++|. ++..|++.+.+|.|.-||+.+.++. .......+.+.+++.+|.+..+
T Consensus 48 ~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl~~lk~~-~~~d~~gg~IWsiai~p~~~~l 125 (691)
T KOG2048|consen 48 NIEIWNLSNNWFLEPVIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDLHTLKQK-YNIDSNGGAIWSIAINPENTIL 125 (691)
T ss_pred cEEEEccCCCceeeEEEecCCCCceeeEEEc-cCCeEEeecCCceEEEEecccCcee-EEecCCCcceeEEEeCCccceE
Confidence 4789999875543 3444 556667679999 5667888888999999999997654 4567778999999999999999
Q ss_pred EEeeCCCcEEEEecCCCceeEEEe---cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLE---FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
+.++.||.+..++...++...... ..+.+.+++|+|++..+++| .||.|++||..+
T Consensus 126 ~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~ 185 (691)
T KOG2048|consen 126 AIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKS 185 (691)
T ss_pred EeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCC
Confidence 999999988888877666544333 35789999999999988876 689999999864
No 149
>KOG4283|consensus
Probab=99.69 E-value=1.6e-15 Score=89.83 Aligned_cols=113 Identities=15% Similarity=0.159 Sum_probs=90.1
Q ss_pred CCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCC---CEEEEeeCCCcEEEEecCC
Q psy6446 19 PHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNN---TRLISCAEDKTVRLWDVSA 94 (134)
Q Consensus 19 ~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~~~d~~~ 94 (134)
+...+..+.|-| |...+.+++.|..+++||.++.+... .+ .-++.|.+-+++|-. -.+++|..+-.|++.|+..
T Consensus 100 Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~-~F-~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~S 177 (397)
T KOG4283|consen 100 HKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAV-DF-KMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIAS 177 (397)
T ss_pred ceeeeeeeEEeeecCceeecccccceEEEeecccceeeE-Ee-ecCceeehhhcChhhhcceEEEEecCCCcEEEEeccC
Confidence 344555588888 77788899999999999998855432 33 245778888888833 3566778888999999999
Q ss_pred CceeEEEe-cCCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 95 SAEVQKLE-FGAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 95 ~~~~~~~~-~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
|..-..+. |...|.++.|+|...+++++ .||.|++||++
T Consensus 178 Gs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiR 219 (397)
T KOG4283|consen 178 GSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIR 219 (397)
T ss_pred CcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEee
Confidence 99888776 67899999999999887753 58999999986
No 150
>KOG1036|consensus
Probab=99.69 E-value=2e-15 Score=89.39 Aligned_cols=113 Identities=21% Similarity=0.258 Sum_probs=95.8
Q ss_pred eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCce
Q psy6446 18 HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAE 97 (134)
Q Consensus 18 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 97 (134)
.+...++.+.|+|.++.|++++.||.+++|+..... .. ..-.|..++.+.+|.+ ...+++|+.||.|+.+|+.+++.
T Consensus 11 pP~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~-l~-~~~~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~ 87 (323)
T KOG1036|consen 11 PPEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANS-LK-LKFKHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNE 87 (323)
T ss_pred CChhceeeEEEcCcCCcEEEEeccCcEEEEeccchh-hh-hheecCCceeeeeccC-CceEEEeccCceEEEEEecCCcc
Confidence 445667779999999999999999999999998753 22 2335889999999985 66789999999999999999999
Q ss_pred eEEEecCCCCeEEEEccCCcEEEE-ecCCeEEEEeCC
Q psy6446 98 VQKLEFGAVPNSLEISRDGTTITV-THGSCVTFLDAN 133 (134)
Q Consensus 98 ~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d~~ 133 (134)
...-.|..++.|+.+++....+++ +.|++|++||.+
T Consensus 88 ~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R 124 (323)
T KOG1036|consen 88 DQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPR 124 (323)
T ss_pred eeeccCCCceEEEEeeccCCeEEEcccCccEEEEecc
Confidence 888889999999999986655555 579999999987
No 151
>KOG1408|consensus
Probab=99.69 E-value=5e-16 Score=101.25 Aligned_cols=131 Identities=15% Similarity=0.206 Sum_probs=108.3
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEec--CCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGS--NDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
|.+||....+.-+.+......++|++|+++|+++++|- ....+++|++..... ...+..|.-.+++++|+|.+++++
T Consensus 60 VVlfn~~~~tQ~hlvnssRk~~t~vAfS~~GryvatGEcG~~pa~kVw~la~h~v-VAEfvdHKY~vtcvaFsp~~kyvv 138 (1080)
T KOG1408|consen 60 VVLFNVDSCTQSHLVNSSRKPLTCVAFSQNGRYVATGECGRTPASKVWSLAFHGV-VAEFVDHKYNVTCVAFSPGNKYVV 138 (1080)
T ss_pred EEEEcccccchhheecccCcceeEEEEcCCCcEEEecccCCCccceeeeeccccc-hhhhhhccccceeeeecCCCcEEE
Confidence 66888887777666765556778899999999999985 566899999998664 456788999999999999999999
Q ss_pred EeeCC--CcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 80 SCAED--KTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 80 ~~~~d--~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
+.+.. -.|.+||.+.......-+..+.|..++|+.+|.|+++.....|++|.++
T Consensus 139 SVGsQHDMIVnv~dWr~N~~~asnkiss~Vsav~fsEdgSYfvT~gnrHvk~wyl~ 194 (1080)
T KOG1408|consen 139 SVGSQHDMIVNVNDWRVNSSGASNKISSVVSAVAFSEDGSYFVTSGNRHVKLWYLQ 194 (1080)
T ss_pred eeccccceEEEhhhhhhcccccccccceeEEEEEEccCCceeeeeeeeeEEEEEee
Confidence 87764 4688898876665555556778999999999999999999999999874
No 152
>KOG2394|consensus
Probab=99.69 E-value=3.7e-16 Score=98.56 Aligned_cols=102 Identities=18% Similarity=0.257 Sum_probs=81.6
Q ss_pred ceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEE
Q psy6446 11 EELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLW 90 (134)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 90 (134)
.++.........+...+|+|||++||+.+.||.++|||+.+.+ +....+..-+...+++|+|||+++++|++|-.|.||
T Consensus 281 NPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~e-Llg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVw 359 (636)
T KOG2394|consen 281 NPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQE-LLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVW 359 (636)
T ss_pred CccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHH-HHHHHHhhccceEEEEEcCCccEEEecCCcceEEEE
Confidence 3444444223344449999999999999999999999998844 334456666889999999999999999999999999
Q ss_pred ecCCCceeEEEe-cCCCCeEEEEc
Q psy6446 91 DVSASAEVQKLE-FGAVPNSLEIS 113 (134)
Q Consensus 91 d~~~~~~~~~~~-~~~~v~~~~~~ 113 (134)
.+..++.+..=. |.+.|..++|+
T Consensus 360 Sf~erRVVARGqGHkSWVs~VaFD 383 (636)
T KOG2394|consen 360 SFEERRVVARGQGHKSWVSVVAFD 383 (636)
T ss_pred EeccceEEEeccccccceeeEeec
Confidence 999888776543 67788888887
No 153
>KOG4378|consensus
Probab=99.69 E-value=8.6e-16 Score=96.43 Aligned_cols=133 Identities=14% Similarity=0.195 Sum_probs=106.1
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeC-CCCCEeEEEEeeCCCEE-
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRG-HSSGIKHVQFFKNNTRL- 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l- 78 (134)
+|.|||++...+.+.++.+...+.++.++-...+|++++..|.|.+..+.++.... .+.. ....|.-+.|+|..+.+
T Consensus 102 ~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt-~f~~~sgqsvRll~ys~skr~lL 180 (673)
T KOG4378|consen 102 CVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTT-TFTIDSGQSVRLLRYSPSKRFLL 180 (673)
T ss_pred eeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCcccc-ceecCCCCeEEEeecccccceee
Confidence 47899999777777788666777779999989999999999999999998866543 3433 34556799999977665
Q ss_pred EEeeCCCcEEEEecCCCceeEEEe--cCCCCeEEEEccCCcEEEE--ecCCeEEEEeCCC
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLE--FGAVPNSLEISRDGTTITV--THGSCVTFLDANS 134 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~--~~~~~i~i~d~~t 134 (134)
.+++.+|.|.+||+....++..+. |..+...++|+|....|++ |.|.+|.+||+.+
T Consensus 181 ~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s 240 (673)
T KOG4378|consen 181 SIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRS 240 (673)
T ss_pred EeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeeccc
Confidence 578889999999998877776554 6788899999998865553 5799999999863
No 154
>KOG0771|consensus
Probab=99.69 E-value=7.1e-16 Score=94.31 Aligned_cols=108 Identities=25% Similarity=0.374 Sum_probs=87.0
Q ss_pred eeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEE---
Q psy6446 24 SSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQK--- 100 (134)
Q Consensus 24 ~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~--- 100 (134)
.+++|+++|..+++|+.||.+|+|+....... .....|.+.|.+++|+||++.|++.+.| ..++|+..++..+..
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~-l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~ 225 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTI-LEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTP 225 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhh-hhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCC
Confidence 34999999999999999999999996654433 3456788999999999999999999999 899999987621100
Q ss_pred -----------------------Ee----------------c-------------CCCCeEEEEccCCcEEEEe-cCCeE
Q psy6446 101 -----------------------LE----------------F-------------GAVPNSLEISRDGTTITVT-HGSCV 127 (134)
Q Consensus 101 -----------------------~~----------------~-------------~~~v~~~~~~~~~~~l~~~-~~~~i 127 (134)
.. . ...+.+++.+++|++++.| .+|.|
T Consensus 226 ~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsV 305 (398)
T KOG0771|consen 226 FSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSV 305 (398)
T ss_pred cccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcE
Confidence 00 0 1257899999999999987 68999
Q ss_pred EEEeCC
Q psy6446 128 TFLDAN 133 (134)
Q Consensus 128 ~i~d~~ 133 (134)
.||+..
T Consensus 306 ai~~~~ 311 (398)
T KOG0771|consen 306 AIYDAK 311 (398)
T ss_pred EEEEec
Confidence 999875
No 155
>KOG1034|consensus
Probab=99.69 E-value=1.8e-16 Score=94.66 Aligned_cols=92 Identities=21% Similarity=0.402 Sum_probs=81.5
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCe--EEeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPT--VYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l 78 (134)
|+|.|+.++++...+.+++..++.+.+.| +.++++++|.|..|++|++++..+... -+.+|...|.+++|++++.++
T Consensus 117 IrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i 196 (385)
T KOG1034|consen 117 IRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRI 196 (385)
T ss_pred EEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCee
Confidence 78999999999999997777777799999 567899999999999999999765432 146899999999999999999
Q ss_pred EEeeCCCcEEEEecC
Q psy6446 79 ISCAEDKTVRLWDVS 93 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~ 93 (134)
++++.|.++++|++.
T Consensus 197 ~ScGmDhslk~W~l~ 211 (385)
T KOG1034|consen 197 ASCGMDHSLKLWRLN 211 (385)
T ss_pred eccCCcceEEEEecC
Confidence 999999999999987
No 156
>KOG1445|consensus
Probab=99.68 E-value=2.5e-16 Score=101.59 Aligned_cols=131 Identities=18% Similarity=0.257 Sum_probs=100.7
Q ss_pred eeEeecCCC-------ceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee
Q psy6446 2 GTVWDAVSG-------EELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK 73 (134)
Q Consensus 2 i~v~d~~~~-------~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~ 73 (134)
|++|-+..+ .+...+..+..-+.++.|+| -.+.|++++.|.+|++||+++.... ..+.+|.+.|..++|+|
T Consensus 652 i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~-~~l~gHtdqIf~~AWSp 730 (1012)
T KOG1445|consen 652 INLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLY-SRLVGHTDQIFGIAWSP 730 (1012)
T ss_pred EEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhh-heeccCcCceeEEEECC
Confidence 678887543 24555664444555599999 6678999999999999999986643 46789999999999999
Q ss_pred CCCEEEEeeCCCcEEEEecCCCceeEEEe---cCCCCeEEEEccCCcEEEE-ec----CCeEEEEeCC
Q psy6446 74 NNTRLISCAEDKTVRLWDVSASAEVQKLE---FGAVPNSLEISRDGTTITV-TH----GSCVTFLDAN 133 (134)
Q Consensus 74 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~-~~----~~~i~i~d~~ 133 (134)
+|+.+++.+.||++++|+.+.+.....-. .+..-..+.|.-+|+++++ |. ..+|.+||..
T Consensus 731 dGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq 798 (1012)
T KOG1445|consen 731 DGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQ 798 (1012)
T ss_pred CCcceeeeecCceEEEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhh
Confidence 99999999999999999988765432221 1234467889999998876 43 3678888764
No 157
>KOG1310|consensus
Probab=99.68 E-value=3.5e-16 Score=99.23 Aligned_cols=121 Identities=20% Similarity=0.282 Sum_probs=97.4
Q ss_pred eeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee--CCCEEEEeeCCCcEEEE
Q psy6446 13 LHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK--NNTRLISCAEDKTVRLW 90 (134)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~ 90 (134)
.+.+.++.+.++|+.|+.+|.+|++|+.|-.+.|||.-..+....+-.+|...|.++.|-| +.+.+++|+.|..|+++
T Consensus 43 E~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lf 122 (758)
T KOG1310|consen 43 EAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLF 122 (758)
T ss_pred hhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEE
Confidence 3456678888888999999999999999999999999877766667789999999999999 56778899999999999
Q ss_pred ecCCCcee----------EEEe-cCCCCeEEEEccCCc--EEEEecCCeEEEEeCC
Q psy6446 91 DVSASAEV----------QKLE-FGAVPNSLEISRDGT--TITVTHGSCVTFLDAN 133 (134)
Q Consensus 91 d~~~~~~~----------~~~~-~~~~v~~~~~~~~~~--~l~~~~~~~i~i~d~~ 133 (134)
|+...+.- ..+. +...|..++-.|++. +..++.||+|+-||++
T Consensus 123 dl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiR 178 (758)
T KOG1310|consen 123 DLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIR 178 (758)
T ss_pred ecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeeccc
Confidence 99752211 1111 345677888889884 3345689999999986
No 158
>KOG2919|consensus
Probab=99.67 E-value=3.7e-15 Score=89.23 Aligned_cols=131 Identities=21% Similarity=0.293 Sum_probs=100.8
Q ss_pred eeEeecCCCceeeEEe---eCCCc--eeeEEEccCCcEEEEecCCCeEEEEEC-CCCCCC-Ce--E---EeCCCCCEeEE
Q psy6446 2 GTVWDAVSGEELHSFQ---HPHIV--KSSVHFATDSYRLATGSNDKNIRIYDL-NKPDAE-PT--V---YRGHSSGIKHV 69 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~l~~~~~d~~v~i~~~-~~~~~~-~~--~---~~~~~~~v~~~ 69 (134)
|.+||..+|+....+. |...+ ..+++|+|||.+|++|.. ..|+++|+ +.+... .. . ..+..+.+.++
T Consensus 135 Ih~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGyk-rcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~ 213 (406)
T KOG2919|consen 135 IHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYK-RCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCF 213 (406)
T ss_pred eeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeeccc-ceEEEeeccCCCCCCcchhhhhcccccccceeeee
Confidence 7899999999887775 33322 234999999999999865 68999998 443211 11 1 12346789999
Q ss_pred EEee-CCCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 70 QFFK-NNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 70 ~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
+|+| +...++.++....+-|+.-..+.+...+. +.+.|+.++|.++|..+.+| .+..|..||++
T Consensus 214 a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR 281 (406)
T KOG2919|consen 214 AFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIR 281 (406)
T ss_pred eccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeeh
Confidence 9999 55578888888888888877777777665 67899999999999988887 37899999987
No 159
>KOG1517|consensus
Probab=99.67 E-value=5.7e-15 Score=99.67 Aligned_cols=133 Identities=19% Similarity=0.327 Sum_probs=104.0
Q ss_pred CeeEeecCCCceeeEEe-eCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCC--CCeEEeCCCCC--EeEEEEeeC
Q psy6446 1 MGTVWDAVSGEELHSFQ-HPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDA--EPTVYRGHSSG--IKHVQFFKN 74 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~--~~~~~~~~~~~--v~~~~~~~~ 74 (134)
+|+|||.....+++.+. ..+..++++.-+. .|+.+++|..||.+++||.+.... .....+.|... |..+.+.++
T Consensus 1188 ~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~ 1267 (1387)
T KOG1517|consen 1188 SIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQ 1267 (1387)
T ss_pred EEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecC
Confidence 48999999888888777 4444444455544 579999999999999999987543 55667788877 999999986
Q ss_pred CC-EEEEeeCCCcEEEEecCCCceeEEEe------cCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 75 NT-RLISCAEDKTVRLWDVSASAEVQKLE------FGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 75 ~~-~l~~~~~d~~i~~~d~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
|- .|++++.||.|.+||++.......+. .++..+++..+++...+++|+.+.|.||++.
T Consensus 1268 G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~q~ikIy~~~ 1333 (1387)
T KOG1517|consen 1268 GLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSAQLIKIYSLS 1333 (1387)
T ss_pred CCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCcceEEEEecC
Confidence 64 59999999999999999742222111 1345899999999999999877999999974
No 160
>KOG0649|consensus
Probab=99.67 E-value=7e-15 Score=85.13 Aligned_cols=113 Identities=20% Similarity=0.222 Sum_probs=90.9
Q ss_pred CceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEE
Q psy6446 21 IVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQK 100 (134)
Q Consensus 21 ~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 100 (134)
+.++++...|..+.++.++.|+.++.||+.++. ..+.+++|..-+.++.-......+++|++||++++||+++.+++..
T Consensus 115 PeINam~ldP~enSi~~AgGD~~~y~~dlE~G~-i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ 193 (325)
T KOG0649|consen 115 PEINAMWLDPSENSILFAGGDGVIYQVDLEDGR-IQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSM 193 (325)
T ss_pred CccceeEeccCCCcEEEecCCeEEEEEEecCCE-EEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEE
Confidence 446679999988888888899999999999976 4578999999999999866667789999999999999999999888
Q ss_pred Eec---CCC----C--eEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 101 LEF---GAV----P--NSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 101 ~~~---~~~----v--~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
+.. ++. . .-.+..-+..++++|..-.+.+|++++
T Consensus 194 ie~yk~~~~lRp~~g~wigala~~edWlvCGgGp~lslwhLrs 236 (325)
T KOG0649|consen 194 IEPYKNPNLLRPDWGKWIGALAVNEDWLVCGGGPKLSLWHLRS 236 (325)
T ss_pred eccccChhhcCcccCceeEEEeccCceEEecCCCceeEEeccC
Confidence 762 111 1 113444567799999889999999864
No 161
>KOG1007|consensus
Probab=99.67 E-value=1.1e-15 Score=90.14 Aligned_cols=130 Identities=20% Similarity=0.336 Sum_probs=98.0
Q ss_pred eeEeecCCCce-eeEEe-----eCCCceeeEEEcc--CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee
Q psy6446 2 GTVWDAVSGEE-LHSFQ-----HPHIVKSSVHFAT--DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK 73 (134)
Q Consensus 2 i~v~d~~~~~~-~~~~~-----~~~~~~~~~~~~~--~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~ 73 (134)
|.+|++..+.. ++.+. ....-+++-+|+| +++.+++.+ |+++..||+++..+......+|...|..++|+|
T Consensus 146 i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~-d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNp 224 (370)
T KOG1007|consen 146 IVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTS-DSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNP 224 (370)
T ss_pred eEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeC-CCcEEEEEccchhhhcchhhhhcceeeeccCCC
Confidence 67899887665 44443 1122344488998 788888764 689999999998777667788999999999999
Q ss_pred CCC-EEEEeeCCCcEEEEecCCCc-eeEEEe-cCCCCeEEEEccCC-cEEEEe-cCCeEEEEeC
Q psy6446 74 NNT-RLISCAEDKTVRLWDVSASA-EVQKLE-FGAVPNSLEISRDG-TTITVT-HGSCVTFLDA 132 (134)
Q Consensus 74 ~~~-~l~~~~~d~~i~~~d~~~~~-~~~~~~-~~~~v~~~~~~~~~-~~l~~~-~~~~i~i~d~ 132 (134)
+.+ +|++++.||.|++||++..+ ++..+. |...+.++.|+|.- ++++++ +|..|.+|..
T Consensus 225 nkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca 288 (370)
T KOG1007|consen 225 NKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCA 288 (370)
T ss_pred CceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEec
Confidence 766 46799999999999998654 444444 56779999999965 455554 6888888865
No 162
>KOG2919|consensus
Probab=99.67 E-value=3.1e-15 Score=89.51 Aligned_cols=133 Identities=24% Similarity=0.407 Sum_probs=98.6
Q ss_pred CeeEeec-CCCceee---EEe----eCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEE
Q psy6446 1 MGTVWDA-VSGEELH---SFQ----HPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQF 71 (134)
Q Consensus 1 ~i~v~d~-~~~~~~~---~~~----~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~ 71 (134)
+|+++|+ +.|+.-. ++. +...+++|++|+| +.+.++.|+.-..+-||.-.... +...+.+|.+.|+.++|
T Consensus 180 cirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~-pl~llggh~gGvThL~~ 258 (406)
T KOG2919|consen 180 CIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRR-PLQLLGGHGGGVTHLQW 258 (406)
T ss_pred eEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCC-ceeeecccCCCeeeEEe
Confidence 4789998 4554321 111 4467888899999 66789999988888888766544 45677899999999999
Q ss_pred eeCCCEEEEeeC-CCcEEEEecCCCce-eEEEe-c-CCCCeEEE--EccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 72 FKNNTRLISCAE-DKTVRLWDVSASAE-VQKLE-F-GAVPNSLE--ISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 72 ~~~~~~l~~~~~-d~~i~~~d~~~~~~-~~~~~-~-~~~v~~~~--~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
.++|+.|.+|++ +..|..||++..+. +..+. + ...-..+- ..|++++|++| .+|.|++||++.
T Consensus 259 ~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~ 328 (406)
T KOG2919|consen 259 CEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKD 328 (406)
T ss_pred ccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCC
Confidence 999999998876 67899999986543 33332 2 21233444 46788999998 689999999863
No 163
>KOG2096|consensus
Probab=99.66 E-value=2.4e-15 Score=89.94 Aligned_cols=129 Identities=18% Similarity=0.259 Sum_probs=95.3
Q ss_pred eeEeecC---CCc-----eeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCC----C--CCC----eEEeCCC
Q psy6446 2 GTVWDAV---SGE-----ELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKP----D--AEP----TVYRGHS 63 (134)
Q Consensus 2 i~v~d~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~----~--~~~----~~~~~~~ 63 (134)
|++|++- .|. .+..++++...+.+++|++++..+++.+.||.+++||.+-. + ... ..+....
T Consensus 252 VkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag 331 (420)
T KOG2096|consen 252 VKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAG 331 (420)
T ss_pred ceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcC
Confidence 5677752 222 24455666666666999999999999999999999997631 1 011 1122334
Q ss_pred CCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe--cCCCCeEEEEccCCcEEEEecCCeEEEEe
Q psy6446 64 SGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE--FGAVPNSLEISRDGTTITVTHGSCVTFLD 131 (134)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~i~i~d 131 (134)
+....+..+|+++.|+.+.. ..++++..++++....+. +...|.+++|+++|+++++++|..++++-
T Consensus 332 ~~p~RL~lsP~g~~lA~s~g-s~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcGdr~vrv~~ 400 (420)
T KOG2096|consen 332 SEPVRLELSPSGDSLAVSFG-SDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCGDRYVRVIR 400 (420)
T ss_pred CCceEEEeCCCCcEEEeecC-CceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeecceeeeeec
Confidence 55669999999998876543 469999998887766655 68899999999999999999998887763
No 164
>KOG0299|consensus
Probab=99.66 E-value=9.1e-16 Score=94.93 Aligned_cols=111 Identities=21% Similarity=0.384 Sum_probs=96.0
Q ss_pred ceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEE
Q psy6446 22 VKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKL 101 (134)
Q Consensus 22 ~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 101 (134)
.+.+++.++|+++|++|+.|..+.||+.++.... ..+++|.+.|.+++|-.....+++++.|+.+++|++.....+.++
T Consensus 204 eil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv-~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetl 282 (479)
T KOG0299|consen 204 EILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHV-KVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETL 282 (479)
T ss_pred eeEEEEEcCCCcEEEecCCCceEEEecCcccchh-hcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHH
Confidence 3445999999999999999999999999996654 568999999999999988889999999999999999887766655
Q ss_pred e-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 102 E-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 102 ~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
. |...|..+.-..-++.+.++ .|+++++|++.
T Consensus 283 yGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~ 316 (479)
T KOG0299|consen 283 YGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIP 316 (479)
T ss_pred hCCccceeeechhcccceEEeccccceeEEEecc
Confidence 4 67888888877777888776 79999999873
No 165
>KOG0290|consensus
Probab=99.66 E-value=1.5e-14 Score=85.61 Aligned_cols=129 Identities=19% Similarity=0.362 Sum_probs=96.7
Q ss_pred CeeEeecCCCce----eeEEeeCCCceeeEEEccCC-cEEEEecCCCeEEEEECCCCC----------------------
Q psy6446 1 MGTVWDAVSGEE----LHSFQHPHIVKSSVHFATDS-YRLATGSNDKNIRIYDLNKPD---------------------- 53 (134)
Q Consensus 1 ~i~v~d~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~v~i~~~~~~~---------------------- 53 (134)
|-.|||++++.. .+.+.|.+.+.. ++|...+ +.|++.+.||.+++||++...
T Consensus 174 TCTiWdie~~~~~~vkTQLIAHDKEV~D-Iaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnk 252 (364)
T KOG0290|consen 174 TCTIWDIETGVSGTVKTQLIAHDKEVYD-IAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNK 252 (364)
T ss_pred eEEEEEEeeccccceeeEEEecCcceeE-EEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCc
Confidence 457999998733 233447777777 9999854 568899999999999997321
Q ss_pred -------------------------CCCeEEeCCCCCEeEEEEeeC-CCEEEEeeCCCcEEEEecCCCc------eeEEE
Q psy6446 54 -------------------------AEPTVYRGHSSGIKHVQFFKN-NTRLISCAEDKTVRLWDVSASA------EVQKL 101 (134)
Q Consensus 54 -------------------------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~------~~~~~ 101 (134)
.+...+.+|++.|+.++|.|. ...+++++.|..+.+||+.+.. ++...
T Consensus 253 qDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay 332 (364)
T KOG0290|consen 253 QDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAY 332 (364)
T ss_pred CCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhh
Confidence 011235679999999999994 5789999999999999997532 23333
Q ss_pred ecCCCCeEEEEccC-CcEEEEecCCeEEEE
Q psy6446 102 EFGAVPNSLEISRD-GTTITVTHGSCVTFL 130 (134)
Q Consensus 102 ~~~~~v~~~~~~~~-~~~l~~~~~~~i~i~ 130 (134)
..+.+|+.+.|++. +.+++++.++++.+.
T Consensus 333 ~a~~EVNqi~Ws~~~~Dwiai~~~kkleiL 362 (364)
T KOG0290|consen 333 TAGGEVNQIQWSSSQPDWIAICFGKKLEIL 362 (364)
T ss_pred hccceeeeeeecccCCCEEEEEecCeeeEE
Confidence 35788999999964 578998887777654
No 166
>KOG2445|consensus
Probab=99.66 E-value=2.3e-14 Score=85.24 Aligned_cols=118 Identities=18% Similarity=0.320 Sum_probs=89.8
Q ss_pred EEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCC---CCeEEeCCCCCEeEEEEee--CCCEEEEeeCCCcEE
Q psy6446 15 SFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDA---EPTVYRGHSSGIKHVQFFK--NNTRLISCAEDKTVR 88 (134)
Q Consensus 15 ~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~---~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~ 88 (134)
.+. ++...+.++.|++.|+.+++++.|+.++|||.+.... .....+.|.+.|..+.|.+ -|+.+++++.|+++.
T Consensus 7 pi~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~ 86 (361)
T KOG2445|consen 7 PIDSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVS 86 (361)
T ss_pred ccccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCcee
Confidence 344 4557778899999999999999999999999765332 2234678999999999965 589999999999999
Q ss_pred EEecCCC-------c--eeEEEe-cCCCCeEEEEccC--CcEEEE-ecCCeEEEEeC
Q psy6446 89 LWDVSAS-------A--EVQKLE-FGAVPNSLEISRD--GTTITV-THGSCVTFLDA 132 (134)
Q Consensus 89 ~~d~~~~-------~--~~~~~~-~~~~v~~~~~~~~--~~~l~~-~~~~~i~i~d~ 132 (134)
||.-... + ...++. ..+.|..++|.|. |-.+++ +.||.++||+.
T Consensus 87 iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA 143 (361)
T KOG2445|consen 87 IWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEA 143 (361)
T ss_pred eeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEec
Confidence 9975211 1 111222 3678999999995 445555 47999999985
No 167
>KOG0307|consensus
Probab=99.65 E-value=4.6e-16 Score=104.71 Aligned_cols=132 Identities=23% Similarity=0.302 Sum_probs=96.6
Q ss_pred CeeEeecCC---Cc---eeeEEe-eCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeE-EeCCCCCEeEEEE
Q psy6446 1 MGTVWDAVS---GE---ELHSFQ-HPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTV-YRGHSSGIKHVQF 71 (134)
Q Consensus 1 ~i~v~d~~~---~~---~~~~~~-~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~-~~~~~~~v~~~~~ 71 (134)
+|.+||... +. .+.++. |.+.+.. +.|++ .++.|++|+.||.|.|||++....+... -......|.+++|
T Consensus 91 ~I~ly~p~~~~~~~~~~~la~~~~h~G~V~g-LDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsW 169 (1049)
T KOG0307|consen 91 NIVLYDPASIIANASEEVLATKSKHTGPVLG-LDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSW 169 (1049)
T ss_pred ceEEecchhhccCcchHHHhhhcccCCceee-eeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEecc
Confidence 367888754 22 344555 6667777 99999 5569999999999999999985544321 1124578999999
Q ss_pred eeC-CCEEEEeeCCCcEEEEecCCCceeEEEecC---CCCeEEEEccCCc--EEEEec-C--CeEEEEeCC
Q psy6446 72 FKN-NTRLISCAEDKTVRLWDVSASAEVQKLEFG---AVPNSLEISRDGT--TITVTH-G--SCVTFLDAN 133 (134)
Q Consensus 72 ~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~---~~v~~~~~~~~~~--~l~~~~-~--~~i~i~d~~ 133 (134)
+.. ...|++++.+|...+||++..+++-.+... ..+..+.|+|+.. .++++. | -.|.+||+|
T Consensus 170 NrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR 240 (1049)
T KOG0307|consen 170 NRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLR 240 (1049)
T ss_pred chhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeeccc
Confidence 874 456778888999999999988877776643 3477999999973 344443 3 489999976
No 168
>KOG2106|consensus
Probab=99.65 E-value=4.9e-14 Score=88.74 Aligned_cols=125 Identities=13% Similarity=0.167 Sum_probs=100.1
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
++++|+ ..+++....-..+..+ +.|+|.| .++.|...|...+.|..+. ........ ..+++.++|+|+|.+|+.
T Consensus 391 ~v~lW~--~~k~~wt~~~~d~~~~-~~fhpsg-~va~Gt~~G~w~V~d~e~~-~lv~~~~d-~~~ls~v~ysp~G~~lAv 464 (626)
T KOG2106|consen 391 HVRLWN--DHKLEWTKIIEDPAEC-ADFHPSG-VVAVGTATGRWFVLDTETQ-DLVTIHTD-NEQLSVVRYSPDGAFLAV 464 (626)
T ss_pred eEEEcc--CCceeEEEEecCceeE-eeccCcc-eEEEeeccceEEEEecccc-eeEEEEec-CCceEEEEEcCCCCEEEE
Confidence 478899 5677766666666665 9999999 9999999999999998873 33333334 789999999999999999
Q ss_pred eeCCCcEEEEecCCCceeEE-Ee--cCCCCeEEEEccCCcEEEE-ecCCeEEEEe
Q psy6446 81 CAEDKTVRLWDVSASAEVQK-LE--FGAVPNSLEISRDGTTITV-THGSCVTFLD 131 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~-~~--~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d 131 (134)
++.|+.|.+|.+........ .. +.+++..+.|++|++++.+ +.|..|..|.
T Consensus 465 gs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~ 519 (626)
T KOG2106|consen 465 GSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWK 519 (626)
T ss_pred ecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEEc
Confidence 99999999999875543332 22 3588999999999999997 4688999994
No 169
>KOG0307|consensus
Probab=99.65 E-value=1.5e-15 Score=102.38 Aligned_cols=132 Identities=16% Similarity=0.325 Sum_probs=107.9
Q ss_pred eeEeecCCCceeeEEe-eCC-CceeeEEEccC-CcEEEEecCCC---eEEEEECCCCCCCCeEEeCCCCCEeEEEEeeC-
Q psy6446 2 GTVWDAVSGEELHSFQ-HPH-IVKSSVHFATD-SYRLATGSNDK---NIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKN- 74 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~-~~~-~~~~~~~~~~~-~~~l~~~~~d~---~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~- 74 (134)
+.|||++..+++-.+. +.. ...+.+.|+|+ .+.+++++.|. .|.+||++....+.+++.+|...|.++.|++.
T Consensus 186 ~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D 265 (1049)
T KOG0307|consen 186 AVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQD 265 (1049)
T ss_pred ceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCC
Confidence 5699999888877776 333 33566999995 45677776653 68999999888788888999999999999995
Q ss_pred CCEEEEeeCCCcEEEEecCCCceeEEEec-CCCCeEEEEccCCc-EEEE-ecCCeEEEEeCC
Q psy6446 75 NTRLISCAEDKTVRLWDVSASAEVQKLEF-GAVPNSLEISRDGT-TITV-THGSCVTFLDAN 133 (134)
Q Consensus 75 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~v~~~~~~~~~~-~l~~-~~~~~i~i~d~~ 133 (134)
..++++++.|+.+.+|+..+++.+..+.. ...+..+.|.|... .+++ +-+|.|.||.+.
T Consensus 266 ~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~ 327 (1049)
T KOG0307|consen 266 PRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQ 327 (1049)
T ss_pred chhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeee
Confidence 48899999999999999999999998875 56789999999876 4444 468999999875
No 170
>KOG4328|consensus
Probab=99.65 E-value=1.5e-15 Score=94.11 Aligned_cols=132 Identities=22% Similarity=0.243 Sum_probs=100.4
Q ss_pred CeeEeecCCCce--eeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee-CCCE
Q psy6446 1 MGTVWDAVSGEE--LHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK-NNTR 77 (134)
Q Consensus 1 ~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 77 (134)
||+.-|++.+.. +..++.....++.+.|+.+...++.+..=|...+||++++......+.-|...|+.++++| ...+
T Consensus 258 tiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~ 337 (498)
T KOG4328|consen 258 TIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWF 337 (498)
T ss_pred eeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchh
Confidence 355556554432 2223334455666888887778888888789999999998776666777888999999999 5567
Q ss_pred EEEeeCCCcEEEEecCCCce-----eEEEecCCCCeEEEEccCCcEEEE-ecCCeEEEEeC
Q psy6446 78 LISCAEDKTVRLWDVSASAE-----VQKLEFGAVPNSLEISRDGTTITV-THGSCVTFLDA 132 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d~ 132 (134)
++|++.|++.+|||++.-.. +..+.|...|.+..|+|.+-.|++ +.|..|+|||.
T Consensus 338 laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~ds 398 (498)
T KOG4328|consen 338 LATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDS 398 (498)
T ss_pred eeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeec
Confidence 89999999999999986332 445557889999999998865665 58999999996
No 171
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.64 E-value=3.5e-14 Score=91.01 Aligned_cols=127 Identities=16% Similarity=0.114 Sum_probs=85.2
Q ss_pred eeEeecCCCceeeEEe-eCCCceeeEEEccCCcEEEEecCC---CeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCE
Q psy6446 2 GTVWDAVSGEELHSFQ-HPHIVKSSVHFATDSYRLATGSND---KNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTR 77 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d---~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 77 (134)
|.+||..... ...+. +...+.. ..|+|+|+.|+..+.+ ..|++||+.++... .+....+....++|+||++.
T Consensus 186 i~i~d~dg~~-~~~lt~~~~~v~~-p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~--~l~~~~g~~~~~~wSPDG~~ 261 (429)
T PRK01742 186 VRVADYDGFN-QFIVNRSSQPLMS-PAWSPDGSKLAYVSFENKKSQLVVHDLRSGARK--VVASFRGHNGAPAFSPDGSR 261 (429)
T ss_pred EEEECCCCCC-ceEeccCCCcccc-ceEcCCCCEEEEEEecCCCcEEEEEeCCCCceE--EEecCCCccCceeECCCCCE
Confidence 6788876444 44444 4444555 9999999999887643 47999999875422 22223334457899999998
Q ss_pred EEEee-CCCcEEEE--ecCCCceeEEEecCCCCeEEEEccCCcEEEEe--cCCeEEEEeC
Q psy6446 78 LISCA-EDKTVRLW--DVSASAEVQKLEFGAVPNSLEISRDGTTITVT--HGSCVTFLDA 132 (134)
Q Consensus 78 l~~~~-~d~~i~~~--d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~ 132 (134)
|+.+. .++...+| |+.+++......+...+....|+|||+.++.. .++...+|++
T Consensus 262 La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~ 321 (429)
T PRK01742 262 LAFASSKDGVLNIYVMGANGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRM 321 (429)
T ss_pred EEEEEecCCcEEEEEEECCCCCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEE
Confidence 88654 67765554 66666544433345567889999999977754 3577777765
No 172
>KOG1963|consensus
Probab=99.64 E-value=4.2e-14 Score=93.32 Aligned_cols=131 Identities=15% Similarity=0.202 Sum_probs=102.3
Q ss_pred eeEeecCCCceee-EE---eeCCCceeeEEEccCCcEEEEecCCCeEEEEECCC---CCCCCeEEeCCCCCEeEEEEeeC
Q psy6446 2 GTVWDAVSGEELH-SF---QHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNK---PDAEPTVYRGHSSGIKHVQFFKN 74 (134)
Q Consensus 2 i~v~d~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~---~~~~~~~~~~~~~~v~~~~~~~~ 74 (134)
+.+|+..++.... .. .++.-.+.|.+++|++++++++..||+|.+|.--. .......++.|...|.++.|+++
T Consensus 183 ~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~ 262 (792)
T KOG1963|consen 183 IHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSD 262 (792)
T ss_pred EEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecC
Confidence 4577776544111 11 13333367799999999999999999999997433 22344568889999999999999
Q ss_pred CCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEE-ecCCeEEEEeC
Q psy6446 75 NTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITV-THGSCVTFLDA 132 (134)
Q Consensus 75 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d~ 132 (134)
|.+|++|+.++.+.+|.+.+++....-+..++|..+.++||+.+.+. ..|+.|++...
T Consensus 263 G~~LlSGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~ 321 (792)
T KOG1963|consen 263 GAYLLSGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKA 321 (792)
T ss_pred CceEeecccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEEec
Confidence 99999999999999999999985544456899999999999987665 58999988754
No 173
>KOG1063|consensus
Probab=99.63 E-value=4.1e-15 Score=96.18 Aligned_cols=118 Identities=14% Similarity=0.160 Sum_probs=93.7
Q ss_pred EEeeCCCceeeEEEccCCcEEEEecCCC-----eEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEE
Q psy6446 15 SFQHPHIVKSSVHFATDSYRLATGSNDK-----NIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRL 89 (134)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~-----~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 89 (134)
++-+++..+.+++.+|+++++++++... .|++|+..+.... ..+.+|.-.|+.++|+||+++|+++++|+++.+
T Consensus 520 KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~-~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl 598 (764)
T KOG1063|consen 520 KLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQV-QELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSL 598 (764)
T ss_pred HhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhh-heecccceEEEEEEECCCCcEEEEeecCceEEe
Confidence 3445666677799999999999987643 5899998876544 468899999999999999999999999999999
Q ss_pred EecCCCcee----E-EEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 90 WDVSASAEV----Q-KLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 90 ~d~~~~~~~----~-~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
|........ . .-.|..-|....|+|++.+++++ .|.+|.+|...
T Consensus 599 ~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~ 648 (764)
T KOG1063|consen 599 YEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEP 648 (764)
T ss_pred eeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEecc
Confidence 987543211 1 11255668999999999988865 79999999753
No 174
>KOG2110|consensus
Probab=99.63 E-value=3e-13 Score=82.14 Aligned_cols=94 Identities=17% Similarity=0.277 Sum_probs=80.0
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCe-EEEEECCCCCCCCeEEeCC-CCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKN-IRIYDLNKPDAEPTVYRGH-SSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~-v~i~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l 78 (134)
.|.+||+.+-+++..+..++..+.|++|+++|.+||+++..|+ ||++.+.+++.....-+|. ...|.+++|+|++++|
T Consensus 154 dV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L 233 (391)
T KOG2110|consen 154 DVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFL 233 (391)
T ss_pred eEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeE
Confidence 3789999999999999977777888999999999999999996 5899998877665443443 3468899999999999
Q ss_pred EEeeCCCcEEEEecCC
Q psy6446 79 ISCAEDKTVRLWDVSA 94 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~ 94 (134)
.+.+..++|++|.+..
T Consensus 234 ~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 234 AASSNTETVHIFKLEK 249 (391)
T ss_pred EEecCCCeEEEEEecc
Confidence 9999999999998753
No 175
>KOG1009|consensus
Probab=99.62 E-value=4.8e-14 Score=86.41 Aligned_cols=116 Identities=25% Similarity=0.351 Sum_probs=89.5
Q ss_pred eCCCceeeEEEccCCc-EEEEecCCCeEEEEECCCCCCC--------CeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEE
Q psy6446 18 HPHIVKSSVHFATDSY-RLATGSNDKNIRIYDLNKPDAE--------PTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVR 88 (134)
Q Consensus 18 ~~~~~~~~~~~~~~~~-~l~~~~~d~~v~i~~~~~~~~~--------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 88 (134)
|....+..+.|.+++. .+++|+.|..|++|.+...... ...+..|...|+.+.|+|+|..|++|+.+|.+.
T Consensus 11 H~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~ 90 (434)
T KOG1009|consen 11 HDHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVF 90 (434)
T ss_pred cCCCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEE
Confidence 3333343489988665 9999999999999998753321 124567999999999999999999999999999
Q ss_pred EEecC--------C----Cc----eeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 89 LWDVS--------A----SA----EVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 89 ~~d~~--------~----~~----~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+|... + .+ ..+.+. +...+..++|+|++.+++++ .|+.+++||+.
T Consensus 91 lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~ 153 (434)
T KOG1009|consen 91 LWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVH 153 (434)
T ss_pred EEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEec
Confidence 99765 1 01 111111 56789999999999999986 68999999986
No 176
>KOG1408|consensus
Probab=99.62 E-value=1.8e-14 Score=94.19 Aligned_cols=133 Identities=15% Similarity=0.245 Sum_probs=103.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEcc---CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCC--------------
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFAT---DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHS-------------- 63 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~-------------- 63 (134)
+++|||+.+-+....++.++..+.|+.++. ..++|++++.|..|++||....-.+...+.+|.
T Consensus 482 nlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln 561 (1080)
T KOG1408|consen 482 NLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLN 561 (1080)
T ss_pred ceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCc
Confidence 489999998888888885555555699986 346889999999999999863221222222221
Q ss_pred -----------------------------------CCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe----cC
Q psy6446 64 -----------------------------------SGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE----FG 104 (134)
Q Consensus 64 -----------------------------------~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~----~~ 104 (134)
..+..|+..|..+++++++.|+.|+|||+..++..+.++ ++
T Consensus 562 ~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~e 641 (1080)
T KOG1408|consen 562 RKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHE 641 (1080)
T ss_pred eEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCC
Confidence 245677788888889999999999999999999999987 34
Q ss_pred CCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 105 AVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 105 ~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+..-.+..+|.|-|++++ .|.++.++|.-
T Consensus 642 G~lIKv~lDPSgiY~atScsdktl~~~Df~ 671 (1080)
T KOG1408|consen 642 GDLIKVILDPSGIYLATSCSDKTLCFVDFV 671 (1080)
T ss_pred CceEEEEECCCccEEEEeecCCceEEEEec
Confidence 567788999999999986 89999999974
No 177
>KOG0321|consensus
Probab=99.62 E-value=6.1e-15 Score=94.72 Aligned_cols=116 Identities=20% Similarity=0.319 Sum_probs=85.7
Q ss_pred eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCC-eEEeCCCCCEeEEEEee-CCCEEEEeeCCCcEEEEecCCC
Q psy6446 18 HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEP-TVYRGHSSGIKHVQFFK-NNTRLISCAEDKTVRLWDVSAS 95 (134)
Q Consensus 18 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~ 95 (134)
|.+.++. +.|-|....|++++.|.++++||+.+..... ..+.+|.+.|.+++|+| +...+++|+.||.+.|||++..
T Consensus 99 H~nAifD-l~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n 177 (720)
T KOG0321|consen 99 HKNAIFD-LKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCN 177 (720)
T ss_pred ccceeEe-eccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEecc
Confidence 5666666 9999977789999999999999998865332 24789999999999999 5567889999999999998743
Q ss_pred c--------------------eeEEEe--------cCCCCeE---EEEccCCcEEEE-e-cCCeEEEEeCCC
Q psy6446 96 A--------------------EVQKLE--------FGAVPNS---LEISRDGTTITV-T-HGSCVTFLDANS 134 (134)
Q Consensus 96 ~--------------------~~~~~~--------~~~~v~~---~~~~~~~~~l~~-~-~~~~i~i~d~~t 134 (134)
. +...+. ....+.+ +.+..|...|++ | .|+.|++||+++
T Consensus 178 ~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk 249 (720)
T KOG0321|consen 178 GVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRK 249 (720)
T ss_pred chhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecc
Confidence 2 000000 1123333 555567777775 4 489999999974
No 178
>KOG0650|consensus
Probab=99.61 E-value=2.6e-15 Score=95.98 Aligned_cols=130 Identities=16% Similarity=0.174 Sum_probs=106.3
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
.|+|||+..++.++.+......++.++.+|.|..|+.|+.|+.+..+|++....+.+.+.-|...+..++|++.-..+++
T Consensus 588 ~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas 667 (733)
T KOG0650|consen 588 SVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFAS 667 (733)
T ss_pred ceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeee
Confidence 47999999888888877555666669999999999999999999999999887777888899999999999999999999
Q ss_pred eeCCCcEEEEe------cCCCcee---EEEe-c----CCCCeEEEEccCCcEEEE-ecCCeEEEE
Q psy6446 81 CAEDKTVRLWD------VSASAEV---QKLE-F----GAVPNSLEISRDGTTITV-THGSCVTFL 130 (134)
Q Consensus 81 ~~~d~~i~~~d------~~~~~~~---~~~~-~----~~~v~~~~~~~~~~~l~~-~~~~~i~i~ 130 (134)
++.|+++.++- +.....+ ..+. | ...|....|+|...+|++ |.||+|++|
T Consensus 668 ~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 668 GSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred ecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 99999998883 2222222 2222 1 234677889999999887 478999998
No 179
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.61 E-value=7.1e-14 Score=89.60 Aligned_cols=127 Identities=21% Similarity=0.224 Sum_probs=82.6
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEec-CCCeEEEE--ECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGS-NDKNIRIY--DLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~v~i~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
|++||+.+++............ .++|+|||+.|+.++ .+|...+| |+.++. ...+..+...+....|+||++.+
T Consensus 230 i~i~dl~tg~~~~l~~~~g~~~-~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~--~~~lt~~~~~~~~~~wSpDG~~i 306 (429)
T PRK01742 230 LVVHDLRSGARKVVASFRGHNG-APAFSPDGSRLAFASSKDGVLNIYVMGANGGT--PSQLTSGAGNNTEPSWSPDGQSI 306 (429)
T ss_pred EEEEeCCCCceEEEecCCCccC-ceeECCCCCEEEEEEecCCcEEEEEEECCCCC--eEeeccCCCCcCCEEECCCCCEE
Confidence 7899998876533222222233 489999999888764 67765555 555433 23455666778899999999987
Q ss_pred EEee-CCCcEEEEecCCC-ceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 79 ISCA-EDKTVRLWDVSAS-AEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 79 ~~~~-~d~~i~~~d~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
+..+ .++...+|++... .....+.... ....|+|+|+.++......+.+||+.
T Consensus 307 ~f~s~~~g~~~I~~~~~~~~~~~~l~~~~--~~~~~SpDG~~ia~~~~~~i~~~Dl~ 361 (429)
T PRK01742 307 LFTSDRSGSPQVYRMSASGGGASLVGGRG--YSAQISADGKTLVMINGDNVVKQDLT 361 (429)
T ss_pred EEEECCCCCceEEEEECCCCCeEEecCCC--CCccCCCCCCEEEEEcCCCEEEEECC
Confidence 7554 5677888876432 2222222222 45789999998877654556668865
No 180
>KOG1272|consensus
Probab=99.61 E-value=1.9e-15 Score=93.93 Aligned_cols=125 Identities=12% Similarity=0.215 Sum_probs=103.4
Q ss_pred EeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeC
Q psy6446 4 VWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAE 83 (134)
Q Consensus 4 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 83 (134)
--|+.+|+.+..+....+.+..+.-+|-...+-+|...|.|.+|......++. .+..|.++|.++++.++|++++|.+.
T Consensus 235 Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLv-KiLcH~g~V~siAv~~~G~YMaTtG~ 313 (545)
T KOG1272|consen 235 YQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLV-KILCHRGPVSSIAVDRGGRYMATTGL 313 (545)
T ss_pred EEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHH-HHHhcCCCcceEEECCCCcEEeeccc
Confidence 45778888888887555666668889988899999999999999998866554 45689999999999999999999999
Q ss_pred CCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEE
Q psy6446 84 DKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFL 130 (134)
Q Consensus 84 d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~ 130 (134)
|..++|||++.-..+.....+.+...+++|..| .|+++....+.+|
T Consensus 314 Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~Sqkg-lLA~~~G~~v~iw 359 (545)
T KOG1272|consen 314 DRKVKIWDLRNFYQLHTYRTPHPASNLSLSQKG-LLALSYGDHVQIW 359 (545)
T ss_pred ccceeEeeeccccccceeecCCCcccccccccc-ceeeecCCeeeee
Confidence 999999999988877776666777888888664 5666666777777
No 181
>KOG2394|consensus
Probab=99.61 E-value=1.1e-14 Score=92.10 Aligned_cols=113 Identities=13% Similarity=0.137 Sum_probs=85.7
Q ss_pred CceeeEEEcc-CCcEEEEecCCCeEEEEECCCCC---------------------------CCCeEEeCCCCCEeEEEEe
Q psy6446 21 IVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPD---------------------------AEPTVYRGHSSGIKHVQFF 72 (134)
Q Consensus 21 ~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~---------------------------~~~~~~~~~~~~v~~~~~~ 72 (134)
.-++|+.|-| +...++++..+|.+++||..... .+...+..-.+.|...+|+
T Consensus 220 tsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS 299 (636)
T KOG2394|consen 220 SSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFS 299 (636)
T ss_pred cceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeEc
Confidence 3455699988 55667777889999999764210 0111111224578999999
Q ss_pred eCCCEEEEeeCCCcEEEEecCCCceeEEEec-CCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 73 KNNTRLISCAEDKTVRLWDVSASAEVQKLEF-GAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 73 ~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
|||++|++.+.||.++|||..+.+.+..++. -+...|++|+|||++|++| .|.-|.||.+.
T Consensus 300 ~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~ 362 (636)
T KOG2394|consen 300 PDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFE 362 (636)
T ss_pred CCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEec
Confidence 9999999999999999999988776665553 4567899999999999986 68999999864
No 182
>KOG0771|consensus
Probab=99.60 E-value=2.1e-14 Score=88.00 Aligned_cols=128 Identities=18% Similarity=0.171 Sum_probs=99.1
Q ss_pred CeeEeecCCCceeeEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCC-----------------------
Q psy6446 1 MGTVWDAVSGEELHSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEP----------------------- 56 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~----------------------- 56 (134)
++|||++.+...+.... |+..+-. +.|+|||+.|++-+.| ..+||+.+++....
T Consensus 167 ~lRv~~~Ps~~t~l~e~~~~~eV~D-L~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~ 244 (398)
T KOG0771|consen 167 TLRVWEWPSMLTILEEIAHHAEVKD-LDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQE 244 (398)
T ss_pred eEEEEecCcchhhhhhHhhcCcccc-ceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCcccchhhhhceecccCCCc
Confidence 47999988877766665 6655555 9999999999999999 89999998751100
Q ss_pred --eEE---------------eCC-------------CCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe--cC
Q psy6446 57 --TVY---------------RGH-------------SSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE--FG 104 (134)
Q Consensus 57 --~~~---------------~~~-------------~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~--~~ 104 (134)
... ..+ ...+++++.+++|++++.|+.||.|.+++..+.+.....+ |.
T Consensus 245 ~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~ 324 (398)
T KOG0771|consen 245 TLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHL 324 (398)
T ss_pred eEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhhe
Confidence 000 001 2368999999999999999999999999998888877766 57
Q ss_pred CCCeEEEEccCCcEEEE-ecCCeEEEE
Q psy6446 105 AVPNSLEISRDGTTITV-THGSCVTFL 130 (134)
Q Consensus 105 ~~v~~~~~~~~~~~l~~-~~~~~i~i~ 130 (134)
..|+.+.|+|+.++++. +.+.+..+.
T Consensus 325 ~~VT~ltF~Pdsr~~~svSs~~~~~v~ 351 (398)
T KOG0771|consen 325 GFVTGLTFSPDSRYLASVSSDNEAAVT 351 (398)
T ss_pred eeeeeEEEcCCcCcccccccCCceeEE
Confidence 78999999999988875 455555544
No 183
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.60 E-value=5.6e-13 Score=82.90 Aligned_cols=132 Identities=17% Similarity=0.159 Sum_probs=90.2
Q ss_pred CeeEeecCC-Cc--eeeEEeeCCCceeeEEEccCCcEEEEec-CCCeEEEEECCCCCCCCeE-EeCCCCCEeEEEEeeCC
Q psy6446 1 MGTVWDAVS-GE--ELHSFQHPHIVKSSVHFATDSYRLATGS-NDKNIRIYDLNKPDAEPTV-YRGHSSGIKHVQFFKNN 75 (134)
Q Consensus 1 ~i~v~d~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~v~i~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~ 75 (134)
+|++||+.+ ++ .+..++....... +.++|++++|++++ .++.|.+|+++........ .....+....+.++|++
T Consensus 13 ~I~~~~~~~~g~l~~~~~~~~~~~~~~-l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g 91 (330)
T PRK11028 13 QIHVWNLNHEGALTLLQVVDVPGQVQP-MVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGSPTHISTDHQG 91 (330)
T ss_pred CEEEEEECCCCceeeeeEEecCCCCcc-EEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCCceEEEECCCC
Confidence 478999964 43 4455554444455 99999999987764 5788999998732221111 11233457899999999
Q ss_pred CEEEEeeC-CCcEEEEecCC-Cc---eeEEEecCCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 76 TRLISCAE-DKTVRLWDVSA-SA---EVQKLEFGAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 76 ~~l~~~~~-d~~i~~~d~~~-~~---~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
+++++++. ++.+.+|++.+ +. ....+.......+++++|++++++++ .++.|.+||++
T Consensus 92 ~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~ 156 (330)
T PRK11028 92 RFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLS 156 (330)
T ss_pred CEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEEC
Confidence 99887664 78899999864 22 22222233456788999999888654 46999999985
No 184
>KOG0290|consensus
Probab=99.60 E-value=1.2e-13 Score=81.83 Aligned_cols=114 Identities=18% Similarity=0.276 Sum_probs=87.1
Q ss_pred CCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCC--CCeEEeCCCCCEeEEEEeeCC-CEEEEeeCCCcEEEEecCCC
Q psy6446 20 HIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDA--EPTVYRGHSSGIKHVQFFKNN-TRLISCAEDKTVRLWDVSAS 95 (134)
Q Consensus 20 ~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~ 95 (134)
...+++..|+. +.++|.+++-|-+..|||+.++.. ....+-+|..+|..++|...+ +.+++++.||.+++||++..
T Consensus 150 ~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~l 229 (364)
T KOG0290|consen 150 CAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSL 229 (364)
T ss_pred CCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEeccc
Confidence 34455589988 888999999999999999998632 334567899999999999855 56789999999999999752
Q ss_pred ce-------------e-----------------------------------EEE-ecCCCCeEEEEccCC-cEEEEe-cC
Q psy6446 96 AE-------------V-----------------------------------QKL-EFGAVPNSLEISRDG-TTITVT-HG 124 (134)
Q Consensus 96 ~~-------------~-----------------------------------~~~-~~~~~v~~~~~~~~~-~~l~~~-~~ 124 (134)
+. + ..+ .|...|+.++|.|.. ..++++ .|
T Consensus 230 eHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD 309 (364)
T KOG0290|consen 230 EHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDD 309 (364)
T ss_pred ccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCc
Confidence 21 0 001 145678999999987 456654 56
Q ss_pred CeEEEEeCC
Q psy6446 125 SCVTFLDAN 133 (134)
Q Consensus 125 ~~i~i~d~~ 133 (134)
.++.+||+.
T Consensus 310 ~qaliWDl~ 318 (364)
T KOG0290|consen 310 CQALIWDLQ 318 (364)
T ss_pred ceEEEEecc
Confidence 899999985
No 185
>KOG3881|consensus
Probab=99.60 E-value=1.3e-13 Score=84.21 Aligned_cols=133 Identities=13% Similarity=0.208 Sum_probs=109.4
Q ss_pred eeEeecCCCceeeEEee-CCC--------ceeeEEEccC--CcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEE
Q psy6446 2 GTVWDAVSGEELHSFQH-PHI--------VKSSVHFATD--SYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQ 70 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~-~~~--------~~~~~~~~~~--~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~ 70 (134)
+.|||++..+.+..-+. ++. -.+.+.|-+. ...|++++.-+.+++||.+.+..+...+.--..+++++.
T Consensus 175 lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~ 254 (412)
T KOG3881|consen 175 LKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTG 254 (412)
T ss_pred eeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeee
Confidence 57999988766655431 111 1233677765 788999999999999999988888777777788999999
Q ss_pred EeeCCCEEEEeeCCCcEEEEecCCCceeEE-Ee-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 71 FFKNNTRLISCAEDKTVRLWDVSASAEVQK-LE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 71 ~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
..|.++.++++...+.+..||++.++.... +. ..+.++++..+|..++++++ -|..++|+|++|
T Consensus 255 l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~kt 321 (412)
T KOG3881|consen 255 LTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKT 321 (412)
T ss_pred ecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeeccc
Confidence 999999999999999999999999887765 33 46789999999999999975 699999999875
No 186
>KOG2139|consensus
Probab=99.59 E-value=1.3e-13 Score=83.75 Aligned_cols=129 Identities=14% Similarity=0.210 Sum_probs=93.7
Q ss_pred CeeEeecCCCceeeEEe-eCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCC-------------eEEeCCCCC
Q psy6446 1 MGTVWDAVSGEELHSFQ-HPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEP-------------TVYRGHSSG 65 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~-------------~~~~~~~~~ 65 (134)
+|++||-.+ +....++ .....+.|++|.| .++.|++|+.. -|.+|......... ....+| ..
T Consensus 121 vVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~-gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~p 197 (445)
T KOG2139|consen 121 VVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRA-GICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NP 197 (445)
T ss_pred EEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecc-eeEEEEcCcccccccccccccccchhheeCCCC-ce
Confidence 478898665 4444555 3445566799999 55677887765 58999865321111 112344 68
Q ss_pred EeEEEEeeCCCEEEEeeC-CCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeC
Q psy6446 66 IKHVQFFKNNTRLISCAE-DKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 66 v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~ 132 (134)
|++|+|++|+..+++++- +..|.+||..++....... ....+.-+.|+||+.++++. -|+..++|+.
T Consensus 198 Vtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e 267 (445)
T KOG2139|consen 198 VTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQE 267 (445)
T ss_pred eeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehh
Confidence 999999999999998765 5679999999988766553 45677889999999887765 7999999953
No 187
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.59 E-value=3.4e-13 Score=77.87 Aligned_cols=106 Identities=16% Similarity=0.245 Sum_probs=75.3
Q ss_pred EEEccCCcEEEEecC----------CCeEEEEECCCCCCCCeEEe-CCCCCEeEEEEeeCCCEEEEe--eCCCcEEEEec
Q psy6446 26 VHFATDSYRLATGSN----------DKNIRIYDLNKPDAEPTVYR-GHSSGIKHVQFFKNNTRLISC--AEDKTVRLWDV 92 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~----------d~~v~i~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~--~~d~~i~~~d~ 92 (134)
+.|+|+|+.|++-.. -+...+|.++........+. ...++|.+++|+|+++.++.. ..++.+.+||+
T Consensus 11 ~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~ 90 (194)
T PF08662_consen 11 LHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDV 90 (194)
T ss_pred EEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcC
Confidence 889999988765432 23455666644333333332 344579999999999987644 45678999999
Q ss_pred CCCceeEEEecCCCCeEEEEccCCcEEEEec----CCeEEEEeCC
Q psy6446 93 SASAEVQKLEFGAVPNSLEISRDGTTITVTH----GSCVTFLDAN 133 (134)
Q Consensus 93 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~~i~i~d~~ 133 (134)
+ ++.+..+. ...+..+.|+|+|+++++++ .|.|.+||++
T Consensus 91 ~-~~~i~~~~-~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~ 133 (194)
T PF08662_consen 91 K-GKKIFSFG-TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVR 133 (194)
T ss_pred c-ccEeEeec-CCCceEEEECCCCCEEEEEEccCCCcEEEEEECC
Confidence 6 55555554 45678999999999998752 4789999986
No 188
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.59 E-value=1.1e-12 Score=82.69 Aligned_cols=131 Identities=23% Similarity=0.426 Sum_probs=100.7
Q ss_pred CeeEeecCC-CceeeEEeeCCCceeeEEEccCCcEEEEecC-CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCC-E
Q psy6446 1 MGTVWDAVS-GEELHSFQHPHIVKSSVHFATDSYRLATGSN-DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNT-R 77 (134)
Q Consensus 1 ~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 77 (134)
++.+||... ......+..+...+..+.|+|++..++.++. ++.+++|+..... ....+.+|...+.+++|+|++. .
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~ 213 (466)
T COG2319 135 TVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGK-PLSTLAGHTDPVSSLAFSPDGGLL 213 (466)
T ss_pred cEEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCc-eEEeeccCCCceEEEEEcCCcceE
Confidence 478899887 6777777755555556999999998888885 9999999998743 3456677999999999999888 5
Q ss_pred EEEeeCCCcEEEEecCCCceeE-EEe-cCCCCeEEEEccCCcEEEE-ecCCeEEEEeCC
Q psy6446 78 LISCAEDKTVRLWDVSASAEVQ-KLE-FGAVPNSLEISRDGTTITV-THGSCVTFLDAN 133 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~~~~~~~-~~~-~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d~~ 133 (134)
+++++.|+.+.+||...+.... .+. +.... ...|+|++.+++. +.++.+++||++
T Consensus 214 ~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~ 271 (466)
T COG2319 214 IASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLR 271 (466)
T ss_pred EEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeec
Confidence 5555899999999988777666 343 22332 2279999966665 478999999975
No 189
>KOG0642|consensus
Probab=99.58 E-value=8.6e-14 Score=88.28 Aligned_cols=94 Identities=22% Similarity=0.379 Sum_probs=74.7
Q ss_pred CeeEeecCC--------CceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCC---------CCCCeEEeCCC
Q psy6446 1 MGTVWDAVS--------GEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKP---------DAEPTVYRGHS 63 (134)
Q Consensus 1 ~i~v~d~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~---------~~~~~~~~~~~ 63 (134)
+|.+|+++. -+++.+|+.+...+-|+.+.+++..+++|+.||.|+.|++... ......+.||.
T Consensus 317 ~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ght 396 (577)
T KOG0642|consen 317 TLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHT 396 (577)
T ss_pred chhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccc
Confidence 366888822 2467888855555555999999999999999999999966421 12334678999
Q ss_pred CCEeEEEEeeCCCEEEEeeCCCcEEEEecCC
Q psy6446 64 SGIKHVQFFKNNTRLISCAEDKTVRLWDVSA 94 (134)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 94 (134)
..+..+++++....|++++.||++++|+...
T Consensus 397 davw~l~~s~~~~~Llscs~DgTvr~w~~~~ 427 (577)
T KOG0642|consen 397 DAVWLLALSSTKDRLLSCSSDGTVRLWEPTE 427 (577)
T ss_pred cceeeeeecccccceeeecCCceEEeeccCC
Confidence 9999999999888999999999999998754
No 190
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.58 E-value=6.2e-13 Score=85.51 Aligned_cols=128 Identities=13% Similarity=0.183 Sum_probs=89.1
Q ss_pred eeEeecCCCceeeEEe-eCCCceeeEEEccCCcEEEEecC---CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCE
Q psy6446 2 GTVWDAVSGEELHSFQ-HPHIVKSSVHFATDSYRLATGSN---DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTR 77 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~---d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 77 (134)
|.++|... .....+. +...+.. ..|+|||+.|+..+. +..|++||+.++.. ..+..+.+.+...+|+||++.
T Consensus 184 l~~~d~dg-~~~~~lt~~~~~v~~-p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~--~~l~~~~g~~~~~~~SPDG~~ 259 (435)
T PRK05137 184 LAIMDQDG-ANVRYLTDGSSLVLT-PRFSPNRQEITYMSYANGRPRVYLLDLETGQR--ELVGNFPGMTFAPRFSPDGRK 259 (435)
T ss_pred EEEECCCC-CCcEEEecCCCCeEe-eEECCCCCEEEEEEecCCCCEEEEEECCCCcE--EEeecCCCcccCcEECCCCCE
Confidence 56777654 4444444 4444554 999999999887653 46899999987643 334556677888999999998
Q ss_pred EE-EeeCCCc--EEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEec--C--CeEEEEeCC
Q psy6446 78 LI-SCAEDKT--VRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH--G--SCVTFLDAN 133 (134)
Q Consensus 78 l~-~~~~d~~--i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~--~~i~i~d~~ 133 (134)
++ +.+.++. |.++|+.+++...............|+|||+.++..+ + ..|+++|+.
T Consensus 260 la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~ 322 (435)
T PRK05137 260 VVMSLSQGGNTDIYTMDLRSGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNAD 322 (435)
T ss_pred EEEEEecCCCceEEEEECCCCceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECC
Confidence 75 5555554 7778888776654333445567799999999887543 2 378888764
No 191
>KOG4328|consensus
Probab=99.57 E-value=1.1e-13 Score=85.94 Aligned_cols=131 Identities=20% Similarity=0.270 Sum_probs=97.0
Q ss_pred eeEeecCCCce-eeEEe-eCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCC---CeEEeCCCCCEeEEEEeeCC
Q psy6446 2 GTVWDAVSGEE-LHSFQ-HPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAE---PTVYRGHSSGIKHVQFFKNN 75 (134)
Q Consensus 2 i~v~d~~~~~~-~~~~~-~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~ 75 (134)
..+||.+++.- ...+. |...+.+ ++++| ...+|++++.|++.+|||++..... ......|...|.+..|+|.+
T Consensus 303 f~~iD~R~~~s~~~~~~lh~kKI~s-v~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~ 381 (498)
T KOG4328|consen 303 FNVIDLRTDGSEYENLRLHKKKITS-VALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSG 381 (498)
T ss_pred eEEEEeecCCccchhhhhhhcccce-eecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCC
Confidence 35788876554 44555 5555555 99999 6677899999999999999863321 12345799999999999987
Q ss_pred CEEEEeeCCCcEEEEecC----CCceeEEEecCC------CCeEEEEccCCcEEEEec-CCeEEEEeCC
Q psy6446 76 TRLISCAEDKTVRLWDVS----ASAEVQKLEFGA------VPNSLEISRDGTTITVTH-GSCVTFLDAN 133 (134)
Q Consensus 76 ~~l~~~~~d~~i~~~d~~----~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~~-~~~i~i~d~~ 133 (134)
-.|++-+.|..|+|||.. ...+...+.|.. ......|.|+..+++++. -..|-++|-+
T Consensus 382 gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~ 450 (498)
T KOG4328|consen 382 GTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGN 450 (498)
T ss_pred CceEeeccCCceEEeecccccccCCccceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCC
Confidence 779999999999999983 445555666532 235678999999998873 4667777753
No 192
>KOG1538|consensus
Probab=99.57 E-value=7e-15 Score=95.58 Aligned_cols=125 Identities=21% Similarity=0.315 Sum_probs=100.7
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEe
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISC 81 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 81 (134)
+.+||...|..+.+++++...+.|++|+.+|+.+++|+.|..|.+|.-.-... ..-.|...|.+|.|+|-...|+++
T Consensus 35 lliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~---LkYSH~D~IQCMsFNP~~h~LasC 111 (1081)
T KOG1538|consen 35 LLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGI---LKYSHNDAIQCMSFNPITHQLASC 111 (1081)
T ss_pred EEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccce---eeeccCCeeeEeecCchHHHhhhc
Confidence 57999999999999997777777799999999999999999999998654322 234699999999999988889988
Q ss_pred eCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEe
Q psy6446 82 AEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLD 131 (134)
Q Consensus 82 ~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d 131 (134)
+-. ..-+|..... .+...+....+.+.+|..||++++.| .+|+|.+-+
T Consensus 112 sLs-dFglWS~~qK-~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRN 160 (1081)
T KOG1538|consen 112 SLS-DFGLWSPEQK-SVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRN 160 (1081)
T ss_pred chh-hccccChhhh-hHHhhhhheeEEEeeecCCCcEEEEeccCceEEeec
Confidence 764 3567765432 23333345678899999999999998 689998865
No 193
>KOG1272|consensus
Probab=99.57 E-value=9.5e-15 Score=90.96 Aligned_cols=130 Identities=18% Similarity=0.234 Sum_probs=108.9
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEe
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISC 81 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 81 (134)
++||| ..|..++.++....+.. +.|-|..-+|++++..|.++.-|+.+++... .+..-.+.+..|.-+|-+..+-+|
T Consensus 193 ~yvYD-~~GtElHClk~~~~v~r-LeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa-~~~t~~G~~~vm~qNP~NaVih~G 269 (545)
T KOG1272|consen 193 VYVYD-NNGTELHCLKRHIRVAR-LEFLPYHFLLVAASEAGFLKYQDVSTGKLVA-SIRTGAGRTDVMKQNPYNAVIHLG 269 (545)
T ss_pred EEEec-CCCcEEeehhhcCchhh-hcccchhheeeecccCCceEEEeechhhhhH-HHHccCCccchhhcCCccceEEEc
Confidence 57888 45788888887777776 9999998899999999999999999877544 344456788889989988888999
Q ss_pred eCCCcEEEEecCCCceeEEE-ecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 82 AEDKTVRLWDVSASAEVQKL-EFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 82 ~~d~~i~~~d~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
..+|+|.+|.....+++..+ .|.++|.++++.++|++++++ .|..++|||+++
T Consensus 270 hsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~ 324 (545)
T KOG1272|consen 270 HSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRN 324 (545)
T ss_pred CCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeecc
Confidence 99999999998877766544 478999999999999999975 799999999974
No 194
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.57 E-value=1.1e-12 Score=84.16 Aligned_cols=131 Identities=18% Similarity=0.125 Sum_probs=82.8
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEE-EecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLA-TGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
|.+||+.+++........... .+..|+|||+.|+ +.+.++...+|.++........+..+........|+||++.++.
T Consensus 222 I~~~dl~~g~~~~l~~~~g~~-~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f 300 (427)
T PRK02889 222 VYVHDLATGRRRVVANFKGSN-SAPAWSPDGRTLAVALSRDGNSQIYTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYF 300 (427)
T ss_pred EEEEECCCCCEEEeecCCCCc-cceEECCCCCEEEEEEccCCCceEEEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEE
Confidence 788999888765433233333 3499999999886 45777776666543322222334445555677899999998876
Q ss_pred eeC-CCcEEEEec--CCCceeEEEecCCCCeEEEEccCCcEEEEe-cC---CeEEEEeCC
Q psy6446 81 CAE-DKTVRLWDV--SASAEVQKLEFGAVPNSLEISRDGTTITVT-HG---SCVTFLDAN 133 (134)
Q Consensus 81 ~~~-d~~i~~~d~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~---~~i~i~d~~ 133 (134)
.+. ++...+|.+ .+++...............|+|+|++++.. .+ ..|.+||+.
T Consensus 301 ~s~~~g~~~Iy~~~~~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~ 360 (427)
T PRK02889 301 TSDRGGAPQIYRMPASGGAAQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLA 360 (427)
T ss_pred EecCCCCcEEEEEECCCCceEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECC
Confidence 554 455566654 444433322223334568899999988754 32 379999975
No 195
>KOG1539|consensus
Probab=99.56 E-value=7.2e-13 Score=87.65 Aligned_cols=129 Identities=10% Similarity=0.182 Sum_probs=107.2
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE-EE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL-IS 80 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~ 80 (134)
+.+||+++++.+.++++....++++.-+|--..++.|..+|.|.+++++.++.+ ..++...+.|+.++|.-||..+ ++
T Consensus 184 lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil-~sFk~d~g~VtslSFrtDG~p~las 262 (910)
T KOG1539|consen 184 LQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKIL-MSFKQDWGRVTSLSFRTDGNPLLAS 262 (910)
T ss_pred EEEEEeccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEE-EEEEccccceeEEEeccCCCeeEEe
Confidence 679999999999999977677777999998889999999999999999987654 4565446999999999999765 56
Q ss_pred eeCCCcEEEEecCCCceeEEEe--cCCCCeEEEEccCCcEEEEe-cCCeEEEEe
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLE--FGAVPNSLEISRDGTTITVT-HGSCVTFLD 131 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d 131 (134)
++..|.+.+||+...+....+. |.+.+....|.|....+++. .|+.+++|=
T Consensus 263 ~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~v 316 (910)
T KOG1539|consen 263 GRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWV 316 (910)
T ss_pred ccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEE
Confidence 6667999999999888777665 56788899999988888864 677766663
No 196
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.56 E-value=2e-12 Score=81.47 Aligned_cols=132 Identities=27% Similarity=0.430 Sum_probs=101.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCc-EEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSY-RLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
++++|+...++.+..+..+...+.+++|+|++. .+++++.|+.+++||...+......+.+|.... ...|+|++..++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 257 (466)
T COG2319 179 TIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLA 257 (466)
T ss_pred ceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEE
Confidence 478999998888888886666666699999988 455558999999998875443322466777665 448999998888
Q ss_pred EeeCCCcEEEEecCCCce-eEEE-ecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 80 SCAEDKTVRLWDVSASAE-VQKL-EFGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~-~~~~-~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+++.|+.+++|+...... .... .+...+.++.|+|++..++++ .|+.+.+||.+
T Consensus 258 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~ 314 (466)
T COG2319 258 SGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLE 314 (466)
T ss_pred EecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcC
Confidence 999999999999987664 3333 356789999999977776654 56789999875
No 197
>KOG4227|consensus
Probab=99.56 E-value=1e-13 Score=85.33 Aligned_cols=116 Identities=20% Similarity=0.247 Sum_probs=96.1
Q ss_pred eCCCceeeEEEccCCcEEEEecCCCeEEEEECCC------CCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEe
Q psy6446 18 HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNK------PDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWD 91 (134)
Q Consensus 18 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 91 (134)
.+...++++.|+.++++|++|+.|..+++|.+.. ++++..+-..|...|.+++|....+++++|..++++.+.|
T Consensus 54 ~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HD 133 (609)
T KOG4227|consen 54 EHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHD 133 (609)
T ss_pred hhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeee
Confidence 4556777799999999999999999999999863 2333222344668999999999899999999999999999
Q ss_pred cCCCceeEEEecC---CCCeEEEEccCCcEEEE-ecCCeEEEEeCC
Q psy6446 92 VSASAEVQKLEFG---AVPNSLEISRDGTTITV-THGSCVTFLDAN 133 (134)
Q Consensus 92 ~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~-~~~~~i~i~d~~ 133 (134)
+.+.+.+..+.+. +.|..+..+|....+++ +.++.|.+||.+
T Consensus 134 iEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~R 179 (609)
T KOG4227|consen 134 IETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNR 179 (609)
T ss_pred cccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEecc
Confidence 9999988888764 48999999998776665 567999999975
No 198
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.55 E-value=1.8e-12 Score=83.22 Aligned_cols=129 Identities=13% Similarity=0.073 Sum_probs=86.1
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEec---CCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGS---NDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
|.++|...........+...... .+|+|||+.|+..+ .+..+.++++.++.. ..+....+.+....|+||++.|
T Consensus 181 l~~~d~dg~~~~~lt~~~~~~~~-p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~--~~l~~~~~~~~~~~~SPDG~~L 257 (429)
T PRK03629 181 LRVSDYDGYNQFVVHRSPQPLMS-PAWSPDGSKLAYVTFESGRSALVIQTLANGAV--RQVASFPRHNGAPAFSPDGSKL 257 (429)
T ss_pred EEEEcCCCCCCEEeecCCCceee-eEEcCCCCEEEEEEecCCCcEEEEEECCCCCe--EEccCCCCCcCCeEECCCCCEE
Confidence 66778764444333334444445 99999999988653 345799999987542 2223334445678999999988
Q ss_pred EEe-eCCC--cEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEec--CC--eEEEEeCC
Q psy6446 79 ISC-AEDK--TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH--GS--CVTFLDAN 133 (134)
Q Consensus 79 ~~~-~~d~--~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~--~i~i~d~~ 133 (134)
+.. ..++ .|.+||+.+++..........+....|+|||+.|+... ++ .|.++|+.
T Consensus 258 a~~~~~~g~~~I~~~d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~ 319 (429)
T PRK03629 258 AFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNIN 319 (429)
T ss_pred EEEEcCCCCcEEEEEECCCCCEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECC
Confidence 754 4444 58899998877655444455678899999999887543 23 45555553
No 199
>KOG0649|consensus
Probab=99.55 E-value=1.1e-12 Score=76.16 Aligned_cols=126 Identities=14% Similarity=0.157 Sum_probs=91.1
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeC---------CC-CCEeEEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRG---------HS-SGIKHVQF 71 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~---------~~-~~v~~~~~ 71 (134)
++-||+++|+....++++...+.++.-......+++|+.||.+++||.++.+... ++.. |- ..|-+++.
T Consensus 138 ~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~-~ie~yk~~~~lRp~~g~wigala~ 216 (325)
T KOG0649|consen 138 IYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVS-MIEPYKNPNLLRPDWGKWIGALAV 216 (325)
T ss_pred EEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeE-EeccccChhhcCcccCceeEEEec
Confidence 5789999999999999777777767765556689999999999999999876542 2221 11 22444443
Q ss_pred eeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeC
Q psy6446 72 FKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 72 ~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~ 132 (134)
+..+++.|+ ...+.+|.++..++...++.+..+..+.|..+ ..++.|..+.+.-|.+
T Consensus 217 --~edWlvCGg-Gp~lslwhLrsse~t~vfpipa~v~~v~F~~d-~vl~~G~g~~v~~~~l 273 (325)
T KOG0649|consen 217 --NEDWLVCGG-GPKLSLWHLRSSESTCVFPIPARVHLVDFVDD-CVLIGGEGNHVQSYTL 273 (325)
T ss_pred --cCceEEecC-CCceeEEeccCCCceEEEecccceeEeeeecc-eEEEeccccceeeeee
Confidence 566776654 45689999999999999998999999988754 3344444455555543
No 200
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.55 E-value=8.3e-13 Score=84.87 Aligned_cols=129 Identities=16% Similarity=0.126 Sum_probs=87.2
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecC---CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSN---DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
|.+||...+.+.....+...+.. ..|+|+|+.|+..+. +..+++|++.++.. ..+....+.....+|+||++.+
T Consensus 186 l~i~D~~g~~~~~lt~~~~~v~~-p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~--~~l~~~~g~~~~~~~SpDG~~l 262 (433)
T PRK04922 186 LQVADSDGYNPQTILRSAEPILS-PAWSPDGKKLAYVSFERGRSAIYVQDLATGQR--ELVASFRGINGAPSFSPDGRRL 262 (433)
T ss_pred EEEECCCCCCceEeecCCCcccc-ccCCCCCCEEEEEecCCCCcEEEEEECCCCCE--EEeccCCCCccCceECCCCCEE
Confidence 67888764444433335545555 999999999987763 34699999987543 2233444556688999999987
Q ss_pred E-EeeCCC--cEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEec--CC--eEEEEeCC
Q psy6446 79 I-SCAEDK--TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH--GS--CVTFLDAN 133 (134)
Q Consensus 79 ~-~~~~d~--~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~--~i~i~d~~ 133 (134)
+ +.+.++ .|.+||+.+++......+.......+|+|||+.++.++ +| .|.++|+.
T Consensus 263 ~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~ 324 (433)
T PRK04922 263 ALTLSRDGNPEIYVMDLGSRQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAAS 324 (433)
T ss_pred EEEEeCCCCceEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECC
Confidence 5 445554 59999998877544333344456789999999887653 33 46666653
No 201
>KOG1523|consensus
Probab=99.54 E-value=2.8e-13 Score=81.07 Aligned_cols=130 Identities=10% Similarity=0.154 Sum_probs=99.4
Q ss_pred eeEeecCCCc---eeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCC--CCCeEEeCCCCCEeEEEEeeCCC
Q psy6446 2 GTVWDAVSGE---ELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPD--AEPTVYRGHSSGIKHVQFFKNNT 76 (134)
Q Consensus 2 i~v~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~ 76 (134)
|.||...... ..+++..+...++.+.|+|..+.|.+++.|..-++|....+. .+...+..+....+++.|+|.++
T Consensus 34 vhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~en 113 (361)
T KOG1523|consen 34 VHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKEN 113 (361)
T ss_pred EEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCc
Confidence 4566655433 456677556666669999999999999999999999984432 22234567889999999999999
Q ss_pred EEEEeeCCCcEEEEecCCCceeEE-----EecCCCCeEEEEccCCcEEEEe-cCCeEEEEe
Q psy6446 77 RLISCAEDKTVRLWDVSASAEVQK-----LEFGAVPNSLEISRDGTTITVT-HGSCVTFLD 131 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d 131 (134)
.+++++..+.|.+|-+...+--.. .+..+.|.++.|+|++-++++| .|+..+++.
T Consensus 114 kFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfS 174 (361)
T KOG1523|consen 114 KFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFS 174 (361)
T ss_pred eEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEE
Confidence 999999999999997765432211 1245778999999999988886 589888875
No 202
>KOG2106|consensus
Probab=99.53 E-value=8.1e-13 Score=83.42 Aligned_cols=129 Identities=16% Similarity=0.228 Sum_probs=100.3
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCC--eEEeC-CCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEP--TVYRG-HSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~--~~~~~-~~~~v~~~~~~~~~~~l 78 (134)
+.+||++.+......+..+.++....|+|.+..++.....+.+.+|+++.+.... ..+.. .+..|.+++|.++++ +
T Consensus 182 lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engd-v 260 (626)
T KOG2106|consen 182 LSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGD-V 260 (626)
T ss_pred cchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCCceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCC-E
Confidence 5689999988888888777787779999965555555556899999988754221 11222 236799999999887 5
Q ss_pred EEeeCCCcEEEEecCCCceeEEE-ecCCCCeEEEEccCCcEEEEecCCeEEEEe
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKL-EFGAVPNSLEISRDGTTITVTHGSCVTFLD 131 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d 131 (134)
+++..+|.|.+|+..+.+..+.. .|+..|.+++...+|.++..+.|..|..||
T Consensus 261 iTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllSGgKDRki~~Wd 314 (626)
T KOG2106|consen 261 ITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLSGGKDRKIILWD 314 (626)
T ss_pred EeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEeecCccceEEecc
Confidence 68999999999998776554443 478899999999999988856799999998
No 203
>KOG0642|consensus
Probab=99.52 E-value=1.6e-13 Score=87.09 Aligned_cols=119 Identities=17% Similarity=0.246 Sum_probs=91.7
Q ss_pred EEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCC-------CCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcE
Q psy6446 15 SFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKP-------DAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTV 87 (134)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 87 (134)
++..+...+.++.|.|....|++++.||.+.+|.++.. ..+...+.+|.++|.++.+.++++.+++|+.||+|
T Consensus 289 tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I 368 (577)
T KOG0642|consen 289 TLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTI 368 (577)
T ss_pred eeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCcee
Confidence 33434444555899998899999999999999999431 12345688999999999999999999999999999
Q ss_pred EEEecCCCc------eeE-----EEecCCCCeEEEEccCCcEEEE-ecCCeEEEEeCC
Q psy6446 88 RLWDVSASA------EVQ-----KLEFGAVPNSLEISRDGTTITV-THGSCVTFLDAN 133 (134)
Q Consensus 88 ~~~d~~~~~------~~~-----~~~~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d~~ 133 (134)
+.|++.... -.. ...+...++.+++++....|+. +.||+++.|+..
T Consensus 369 ~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~ 426 (577)
T KOG0642|consen 369 RCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPT 426 (577)
T ss_pred eeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccC
Confidence 999765211 111 1225678899999998877765 479999999864
No 204
>KOG1524|consensus
Probab=99.52 E-value=8.3e-14 Score=88.51 Aligned_cols=85 Identities=19% Similarity=0.274 Sum_probs=65.4
Q ss_pred CceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCC-------------------------------------
Q psy6446 10 GEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKP------------------------------------- 52 (134)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~------------------------------------- 52 (134)
++....+..+...+.|-.|+|+|.-|++++.||.|++|.-...
T Consensus 94 ~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~h~~IKpL 173 (737)
T KOG1524|consen 94 ARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPNSNSIVFCQGGHISIKPL 173 (737)
T ss_pred chhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECCCCCceEEecCCeEEEeec
Confidence 3344444545556666999999999999999999999975310
Q ss_pred --CCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCC
Q psy6446 53 --DAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSA 94 (134)
Q Consensus 53 --~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 94 (134)
.......+.|.+-|.+++|++..+.+++|++|-..++||-..
T Consensus 174 ~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G 217 (737)
T KOG1524|consen 174 AANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQG 217 (737)
T ss_pred ccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccC
Confidence 000113467999999999999999999999999999999654
No 205
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.51 E-value=9.7e-12 Score=77.42 Aligned_cols=131 Identities=13% Similarity=0.094 Sum_probs=87.4
Q ss_pred eeEeecC-CCce--eeEEeeCCCceeeEEEccCCcEEEEecC-CCeEEEEECCCCCCCCeEE--eCCCCCEeEEEEeeCC
Q psy6446 2 GTVWDAV-SGEE--LHSFQHPHIVKSSVHFATDSYRLATGSN-DKNIRIYDLNKPDAEPTVY--RGHSSGIKHVQFFKNN 75 (134)
Q Consensus 2 i~v~d~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~~v~i~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~ 75 (134)
|.+|++. +++. +........... +.++|+++.+++++. ++.+.+|++++........ ..+......++++|++
T Consensus 59 i~~~~~~~~g~l~~~~~~~~~~~p~~-i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g 137 (330)
T PRK11028 59 VLSYRIADDGALTFAAESPLPGSPTH-ISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDN 137 (330)
T ss_pred EEEEEECCCCceEEeeeecCCCCceE-EEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCC
Confidence 5678876 3432 222333334444 999999998887764 7899999997532221111 1222446778899999
Q ss_pred CEEEEe-eCCCcEEEEecCCCceeE-------EEecCCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 76 TRLISC-AEDKTVRLWDVSASAEVQ-------KLEFGAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 76 ~~l~~~-~~d~~i~~~d~~~~~~~~-------~~~~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
++++++ ..++.|.+||+.+...+. ..........+.|+|+|+++++. .++.|.+||++
T Consensus 138 ~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~ 205 (330)
T PRK11028 138 RTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLK 205 (330)
T ss_pred CEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEe
Confidence 988654 456899999997633221 12234557889999999988765 37999999974
No 206
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.51 E-value=4.5e-12 Score=81.59 Aligned_cols=130 Identities=14% Similarity=0.126 Sum_probs=87.5
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEE-EecCCCe--EEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLA-TGSNDKN--IRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTR 77 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~--v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 77 (134)
.|++||+.+++............ ...|+|+|+.|+ +.+.++. |+++|+.++.. ..+..+........|+||++.
T Consensus 227 ~i~~~dl~~g~~~~l~~~~g~~~-~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~--~~Lt~~~~~~~~~~~spDG~~ 303 (435)
T PRK05137 227 RVYLLDLETGQRELVGNFPGMTF-APRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTT--TRLTDSPAIDTSPSYSPDGSQ 303 (435)
T ss_pred EEEEEECCCCcEEEeecCCCccc-CcEECCCCCEEEEEEecCCCceEEEEECCCCce--EEccCCCCccCceeEcCCCCE
Confidence 37899998887643333443334 499999998875 4455554 77778876542 334455566778999999998
Q ss_pred EEEeeC-CC--cEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-c-C--CeEEEEeCC
Q psy6446 78 LISCAE-DK--TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-H-G--SCVTFLDAN 133 (134)
Q Consensus 78 l~~~~~-d~--~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-~--~~i~i~d~~ 133 (134)
++..+. ++ .|.++|+..++...............|+|+|+.++.. . . ..|.+||+.
T Consensus 304 i~f~s~~~g~~~Iy~~d~~g~~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~ 366 (435)
T PRK05137 304 IVFESDRSGSPQLYVMNADGSNPRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPD 366 (435)
T ss_pred EEEEECCCCCCeEEEEECCCCCeEEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECC
Confidence 886653 33 5888887766554433334556678999999988764 2 2 468888863
No 207
>KOG0644|consensus
Probab=99.50 E-value=1.3e-14 Score=95.98 Aligned_cols=112 Identities=21% Similarity=0.364 Sum_probs=97.1
Q ss_pred eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCce
Q psy6446 18 HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAE 97 (134)
Q Consensus 18 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 97 (134)
++...+.|+.|...|.++++|+.|..++||.+.+..+. ....||.+.++.++.+.+...+++++.|..|++|.+.++.+
T Consensus 188 gH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~l-As~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~p 266 (1113)
T KOG0644|consen 188 GHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCL-ASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAP 266 (1113)
T ss_pred hhhhheeeeeeccccceEeecCccceeeeeeccchhhh-ccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCch
Confidence 34445556999999999999999999999998886655 46899999999999998888999999999999999999998
Q ss_pred eEEEe-cCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 98 VQKLE-FGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 98 ~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
+..+. |.+.|++++|+|-. .++.||++++||.+
T Consensus 267 vsvLrghtgavtaiafsP~~---sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 267 VSVLRGHTGAVTAIAFSPRA---SSSDDGTCRIWDAR 300 (1113)
T ss_pred HHHHhccccceeeeccCccc---cCCCCCceEecccc
Confidence 88776 68899999999975 34568999999975
No 208
>KOG3881|consensus
Probab=99.50 E-value=3.1e-13 Score=82.60 Aligned_cols=115 Identities=17% Similarity=0.231 Sum_probs=99.5
Q ss_pred CeeEeecCCC-ceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSG-EELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
.+++||.+.+ +++..+...+..++++...|.++.+++|...+.+..||++.+......+++..+.+.++..+|..++++
T Consensus 227 qvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~la 306 (412)
T KOG3881|consen 227 QVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLA 306 (412)
T ss_pred eEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEE
Confidence 3789999855 578999977777777999999999999999999999999998777666889999999999999999999
Q ss_pred EeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRD 115 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~ 115 (134)
+++-|+.++|+|+.+.+.+......+..+++-+.++
T Consensus 307 s~GLDRyvRIhD~ktrkll~kvYvKs~lt~il~~~~ 342 (412)
T KOG3881|consen 307 SCGLDRYVRIHDIKTRKLLHKVYVKSRLTFILLRDD 342 (412)
T ss_pred eeccceeEEEeecccchhhhhhhhhccccEEEecCC
Confidence 999999999999999777666666677777777554
No 209
>KOG2111|consensus
Probab=99.50 E-value=1.2e-11 Score=74.16 Aligned_cols=93 Identities=18% Similarity=0.218 Sum_probs=74.6
Q ss_pred eeEeecCCCce--eeEEeeCCCceeeEEEccCCcEEEEecCCCe-EEEEECCCCCCCCeEEeCC-CCCEeEEEEeeCCCE
Q psy6446 2 GTVWDAVSGEE--LHSFQHPHIVKSSVHFATDSYRLATGSNDKN-IRIYDLNKPDAEPTVYRGH-SSGIKHVQFFKNNTR 77 (134)
Q Consensus 2 i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~-v~i~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~ 77 (134)
|.|-|+...+. -..+..+...+.|++.+.+|..+|++|..|+ |+|||..++..+...-+|. ...+.+++|+|+..+
T Consensus 161 vQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~ 240 (346)
T KOG2111|consen 161 VQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSW 240 (346)
T ss_pred EEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccE
Confidence 56777765554 2556656666777999999999999999996 6999999987665443443 357999999999999
Q ss_pred EEEeeCCCcEEEEecCC
Q psy6446 78 LISCAEDKTVRLWDVSA 94 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~~ 94 (134)
|+.++.-|++++|.++.
T Consensus 241 LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 241 LAVSSDKGTLHIFSLRD 257 (346)
T ss_pred EEEEcCCCeEEEEEeec
Confidence 99999999999998875
No 210
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.49 E-value=1.1e-11 Score=79.66 Aligned_cols=129 Identities=16% Similarity=0.189 Sum_probs=84.8
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEe-cCCC--eEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATG-SNDK--NIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~--~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
|++||+.+++............. ..|+|||+.|+.. +.+| .|++||+.++.. ..+..+...+....|+||++.|
T Consensus 225 i~i~dl~~G~~~~l~~~~~~~~~-~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~--~~lt~~~~~~~~~~wSPDG~~I 301 (429)
T PRK03629 225 LVIQTLANGAVRQVASFPRHNGA-PAFSPDGSKLAFALSKTGSLNLYVMDLASGQI--RQVTDGRSNNTEPTWFPDSQNL 301 (429)
T ss_pred EEEEECCCCCeEEccCCCCCcCC-eEECCCCCEEEEEEcCCCCcEEEEEECCCCCE--EEccCCCCCcCceEECCCCCEE
Confidence 67888887765443333333334 8999999988764 4444 588899887542 2333444567889999999988
Q ss_pred EEeeCC-Cc--EEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-c-C--CeEEEEeCC
Q psy6446 79 ISCAED-KT--VRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-H-G--SCVTFLDAN 133 (134)
Q Consensus 79 ~~~~~d-~~--i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-~--~~i~i~d~~ 133 (134)
+..+.+ +. |.++|+.+++...............|+|||++++.. . + ..|.+||++
T Consensus 302 ~f~s~~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~ 363 (429)
T PRK03629 302 AYTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA 363 (429)
T ss_pred EEEeCCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECC
Confidence 766653 44 555566666543332234455678999999988753 2 2 468888875
No 211
>KOG2321|consensus
Probab=99.49 E-value=9.3e-13 Score=84.28 Aligned_cols=132 Identities=14% Similarity=0.168 Sum_probs=104.0
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeE-----EeCCCC-----CEeEEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTV-----YRGHSS-----GIKHVQF 71 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~-----~~~~~~-----~v~~~~~ 71 (134)
|+-+++..|..+..+......++++..++...+|++|+.+|.|..||.+........ ...|.+ .|+++.|
T Consensus 157 vYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F 236 (703)
T KOG2321|consen 157 VYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKF 236 (703)
T ss_pred eEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEe
Confidence 455677788888888877677888999998889999999999999999875433211 122333 4999999
Q ss_pred eeCCCEEEEeeCCCcEEEEecCCCceeEEEec--CCCCeEEEEccC--CcEEEEecCCeEEEEeCC
Q psy6446 72 FKNNTRLISCAEDKTVRLWDVSASAEVQKLEF--GAVPNSLEISRD--GTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 72 ~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~--~~~v~~~~~~~~--~~~l~~~~~~~i~i~d~~ 133 (134)
+.+|-.++.|..+|.+.+||+++.+++..-.| ..+|..+.|.+. +..+++.....++|||-.
T Consensus 237 ~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiWd~~ 302 (703)
T KOG2321|consen 237 RDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSMDKRILKIWDEC 302 (703)
T ss_pred cCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEecchHHhhhcccc
Confidence 99999999999999999999999998887776 467788888775 345666666889999853
No 212
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.49 E-value=3.1e-11 Score=76.03 Aligned_cols=131 Identities=12% Similarity=0.141 Sum_probs=91.5
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
+|.+.|..+.+.+..++........+.|+|||+++++.+.||.|.++|+.+.+... ..+ ......++++++||+++++
T Consensus 17 ~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~-~i~-~G~~~~~i~~s~DG~~~~v 94 (369)
T PF02239_consen 17 SVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVA-TIK-VGGNPRGIAVSPDGKYVYV 94 (369)
T ss_dssp EEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEE-EEE--SSEEEEEEE--TTTEEEE
T ss_pred EEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEE-EEe-cCCCcceEEEcCCCCEEEE
Confidence 36789999999999998554443337899999999999999999999999876443 333 2345788999999999886
Q ss_pred ee-CCCcEEEEecCCCceeEEEecC--------CCCeEEEEccCCcEEE-EecC-CeEEEEeCC
Q psy6446 81 CA-EDKTVRLWDVSASAEVQKLEFG--------AVPNSLEISRDGTTIT-VTHG-SCVTFLDAN 133 (134)
Q Consensus 81 ~~-~d~~i~~~d~~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~-~~~~-~~i~i~d~~ 133 (134)
+. .++.+.++|.++.+.++.+... ..+..+..+|....++ .-.+ +.|.+.|..
T Consensus 95 ~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~ 158 (369)
T PF02239_consen 95 ANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYS 158 (369)
T ss_dssp EEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETT
T ss_pred EecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEec
Confidence 64 6889999999999999887632 3456777788887444 4444 888888753
No 213
>KOG2139|consensus
Probab=99.48 E-value=3.1e-12 Score=77.98 Aligned_cols=112 Identities=16% Similarity=0.190 Sum_probs=83.7
Q ss_pred eCCCceeeEEEccCCcEEEEecC-CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecC-CC
Q psy6446 18 HPHIVKSSVHFATDSYRLATGSN-DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVS-AS 95 (134)
Q Consensus 18 ~~~~~~~~~~~~~~~~~l~~~~~-d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~-~~ 95 (134)
++..+.+ +.|++||..+++++. |..|.+||..++...... .--.+.++-+.|+||+.+|+++.-|+..++|+.. +.
T Consensus 194 gh~pVts-mqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~-~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~w 271 (445)
T KOG2139|consen 194 GHNPVTS-MQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLI-PKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSW 271 (445)
T ss_pred CCceeeE-EEEcCCCCEEeecccCcceEEEEcCCCCCccccc-ccCCCceeeEEEcCCCCEEEEecccceeeeehhcccc
Confidence 3444444 999999999998875 568999999987755432 2345778999999999999999999999999654 33
Q ss_pred ceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEe
Q psy6446 96 AEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLD 131 (134)
Q Consensus 96 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d 131 (134)
...+-....+.+...+|+|+|++++....|.=++|.
T Consensus 272 t~erw~lgsgrvqtacWspcGsfLLf~~sgsp~lys 307 (445)
T KOG2139|consen 272 TKERWILGSGRVQTACWSPCGSFLLFACSGSPRLYS 307 (445)
T ss_pred eecceeccCCceeeeeecCCCCEEEEEEcCCceEEE
Confidence 333333345689999999999988765444444443
No 214
>KOG1523|consensus
Probab=99.48 E-value=5.7e-12 Score=75.60 Aligned_cols=119 Identities=13% Similarity=0.281 Sum_probs=94.1
Q ss_pred EEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCC--CCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEec
Q psy6446 15 SFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPD--AEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDV 92 (134)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 92 (134)
.+......+.|.+|++|++.++++.....+.||...... ....++..|...|+.++|+|..+.|++++.|..-.+|..
T Consensus 5 ~~~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~ 84 (361)
T KOG1523|consen 5 VFHRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQ 84 (361)
T ss_pred EeeeccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCcccccc
Confidence 343334456669999999999999999999999987654 344567889999999999999999999999999999988
Q ss_pred C-CCce---eEEEecCCCCeEEEEccCCcEEEEec-CCeEEEEeCC
Q psy6446 93 S-ASAE---VQKLEFGAVPNSLEISRDGTTITVTH-GSCVTFLDAN 133 (134)
Q Consensus 93 ~-~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~ 133 (134)
. .++- +..+.......++.|+|.+..+++++ ...|.+|-++
T Consensus 85 ~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E 130 (361)
T KOG1523|consen 85 PSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYE 130 (361)
T ss_pred CCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEe
Confidence 4 3332 22334678899999999999888875 4677776543
No 215
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.47 E-value=1.8e-11 Score=78.42 Aligned_cols=129 Identities=17% Similarity=0.174 Sum_probs=86.7
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEE-ecCCC--eEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLAT-GSNDK--NIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~d~--~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
|++||+.+++............. +.|+|+++.|+. .+.++ .+++|++.++.. ..+..+........|+|+++.|
T Consensus 216 i~v~d~~~g~~~~~~~~~~~~~~-~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~--~~l~~~~~~~~~~~~s~dg~~l 292 (417)
T TIGR02800 216 IYVQDLATGQREKVASFPGMNGA-PAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQL--TRLTNGPGIDTEPSWSPDGKSI 292 (417)
T ss_pred EEEEECCCCCEEEeecCCCCccc-eEECCCCCEEEEEECCCCCccEEEEECCCCCE--EECCCCCCCCCCEEECCCCCEE
Confidence 78899988766544334433444 899999987764 44444 588888876532 2333444455677899999988
Q ss_pred EEeeC-CC--cEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCC---eEEEEeCC
Q psy6446 79 ISCAE-DK--TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGS---CVTFLDAN 133 (134)
Q Consensus 79 ~~~~~-d~--~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~---~i~i~d~~ 133 (134)
+..+. ++ .|.++|+.+++.............+.|+|+|++++.+ .++ .|.+||+.
T Consensus 293 ~~~s~~~g~~~iy~~d~~~~~~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~ 354 (417)
T TIGR02800 293 AFTSDRGGSPQIYMMDADGGEVRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLD 354 (417)
T ss_pred EEEECCCCCceEEEEECCCCCEEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCC
Confidence 76554 33 5778888776654433345566788999999988865 333 78888875
No 216
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.46 E-value=2.4e-11 Score=78.17 Aligned_cols=129 Identities=16% Similarity=0.139 Sum_probs=84.7
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCC---CeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSND---KNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
|.++|...+.......+...+.. ..|+|+|+.|+..+.+ ..|.+|++.++... .+....+......|+||++.+
T Consensus 181 l~~~d~~g~~~~~l~~~~~~~~~-p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~--~l~~~~g~~~~~~~SpDG~~l 257 (430)
T PRK00178 181 LQRSDYDGARAVTLLQSREPILS-PRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRRE--QITNFEGLNGAPAWSPDGSKL 257 (430)
T ss_pred EEEECCCCCCceEEecCCCceee-eeECCCCCEEEEEEcCCCCCEEEEEECCCCCEE--EccCCCCCcCCeEECCCCCEE
Confidence 55667664444333345444455 9999999998776543 36889999875432 233334455678999999988
Q ss_pred E-EeeCCC--cEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEec--C--CeEEEEeCC
Q psy6446 79 I-SCAEDK--TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH--G--SCVTFLDAN 133 (134)
Q Consensus 79 ~-~~~~d~--~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~--~~i~i~d~~ 133 (134)
+ +...++ .|.++|+.+++...............|+|||+.++... + ..|+++|+.
T Consensus 258 a~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~ 319 (430)
T PRK00178 258 AFVLSKDGNPEIYVMDLASRQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVN 319 (430)
T ss_pred EEEEccCCCceEEEEECCCCCeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECC
Confidence 7 444444 58888998876554333444556789999998776542 2 367777764
No 217
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.45 E-value=2.4e-11 Score=78.22 Aligned_cols=129 Identities=17% Similarity=0.153 Sum_probs=86.0
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEE-ecCCC--eEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLAT-GSNDK--NIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~d~--~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
|++||+.+++......... ...+..|+|+|+.++. .+.+| .|++||+.++.. ..+..+.......+|+||++.+
T Consensus 230 l~~~dl~~g~~~~l~~~~g-~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~--~~lt~~~~~~~~~~~spDG~~l 306 (433)
T PRK04922 230 IYVQDLATGQRELVASFRG-INGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQL--TRLTNHFGIDTEPTWAPDGKSI 306 (433)
T ss_pred EEEEECCCCCEEEeccCCC-CccCceECCCCCEEEEEEeCCCCceEEEEECCCCCe--EECccCCCCccceEECCCCCEE
Confidence 6789998777644333333 3334899999998764 44454 689999887542 2344455556788999999988
Q ss_pred EEeeC-CCc--EEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cC---CeEEEEeCC
Q psy6446 79 ISCAE-DKT--VRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HG---SCVTFLDAN 133 (134)
Q Consensus 79 ~~~~~-d~~--i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~---~~i~i~d~~ 133 (134)
+..+. ++. +.++|+.+++..............+|+|+|+.++.. .+ ..|.+||+.
T Consensus 307 ~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~ 368 (433)
T PRK04922 307 YFTSDRGGRPQIYRVAASGGSAERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLS 368 (433)
T ss_pred EEEECCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECC
Confidence 86653 444 666677666544333333445578999999988764 22 368999975
No 218
>KOG0322|consensus
Probab=99.45 E-value=4.3e-13 Score=78.54 Aligned_cols=75 Identities=25% Similarity=0.391 Sum_probs=65.7
Q ss_pred eeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEec
Q psy6446 17 QHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDV 92 (134)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 92 (134)
+-.+..++-+...||++.+++++.|+.+++|..++...+ ..++-|...|++++|+|+...+++++.|+.|.+|++
T Consensus 248 ~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pL-AVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 248 TLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPL-AVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred EecCCCccceEEccCCcEEeecccCCcEEEEEeccCCch-hhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 334444555889999999999999999999999997654 578899999999999999999999999999999986
No 219
>KOG0650|consensus
Probab=99.45 E-value=1.7e-11 Score=79.03 Aligned_cols=131 Identities=16% Similarity=0.225 Sum_probs=95.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCc--EEEEecCCCeEEEEECCCCC-------------------------
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSY--RLATGSNDKNIRIYDLNKPD------------------------- 53 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~d~~v~i~~~~~~~------------------------- 53 (134)
||+||.+.+|.+++++.....+.+ ++|+|.+. .|+++... .+.+-+..-+.
T Consensus 423 tvriWEi~TgRcvr~~~~d~~I~~-vaw~P~~~~~vLAvA~~~-~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~ 500 (733)
T KOG0650|consen 423 TVRIWEIATGRCVRTVQFDSEIRS-VAWNPLSDLCVLAVAVGE-CVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVV 500 (733)
T ss_pred cEEEEEeecceEEEEEeecceeEE-EEecCCCCceeEEEEecC-ceEEeCccccchhhhcchhhhhhcCCCccCCcccce
Confidence 689999999999999987765555 99999654 34444333 24443321110
Q ss_pred -----------CCCeEEeCCCCCEeEEEEeeCCCEEEEeeCC---CcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcE
Q psy6446 54 -----------AEPTVYRGHSSGIKHVQFFKNNTRLISCAED---KTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTT 118 (134)
Q Consensus 54 -----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~ 118 (134)
.-....-.|...|.++.|+..|.+|++...+ ..|.|.++...+....+. ..+.+.++.|+|...+
T Consensus 501 ~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~ 580 (733)
T KOG0650|consen 501 TWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPY 580 (733)
T ss_pred eechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhhcCCceeEEEecCCCce
Confidence 0001223467889999999999999987664 468999988776655553 4678999999999999
Q ss_pred EEEecCCeEEEEeCC
Q psy6446 119 ITVTHGSCVTFLDAN 133 (134)
Q Consensus 119 l~~~~~~~i~i~d~~ 133 (134)
++++....|++||+.
T Consensus 581 lfVaTq~~vRiYdL~ 595 (733)
T KOG0650|consen 581 LFVATQRSVRIYDLS 595 (733)
T ss_pred EEEEeccceEEEehh
Confidence 999999999999974
No 220
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.44 E-value=1.2e-11 Score=79.42 Aligned_cols=125 Identities=18% Similarity=0.214 Sum_probs=79.6
Q ss_pred eeEeecCCCceeeEE-eeCCCceeeEEEccCCcEEEEecCC---CeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCE
Q psy6446 2 GTVWDAVSGEELHSF-QHPHIVKSSVHFATDSYRLATGSND---KNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTR 77 (134)
Q Consensus 2 i~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d---~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 77 (134)
|.++|.. +.....+ .+...+.. .+|+|+|+.|+..+.+ ..|.+||+.++... .+....+......|+||++.
T Consensus 178 L~~~D~d-G~~~~~l~~~~~~v~~-p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~--~l~~~~g~~~~~~~SPDG~~ 253 (427)
T PRK02889 178 LQISDAD-GQNAQSALSSPEPIIS-PAWSPDGTKLAYVSFESKKPVVYVHDLATGRRR--VVANFKGSNSAPAWSPDGRT 253 (427)
T ss_pred EEEECCC-CCCceEeccCCCCccc-ceEcCCCCEEEEEEccCCCcEEEEEECCCCCEE--EeecCCCCccceEECCCCCE
Confidence 4566654 4443333 34444445 9999999998876542 46999999876532 23334456678999999998
Q ss_pred EE-EeeCCCcEEEEe--cCCCceeEEEe-cCCCCeEEEEccCCcEEEEec--CCeEEEEe
Q psy6446 78 LI-SCAEDKTVRLWD--VSASAEVQKLE-FGAVPNSLEISRDGTTITVTH--GSCVTFLD 131 (134)
Q Consensus 78 l~-~~~~d~~i~~~d--~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d 131 (134)
++ +.+.++...+|. ...+.. ..+. .........|+|||+.++..+ ++...+|.
T Consensus 254 la~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~ 312 (427)
T PRK02889 254 LAVALSRDGNSQIYTVNADGSGL-RRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYR 312 (427)
T ss_pred EEEEEccCCCceEEEEECCCCCc-EECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEE
Confidence 86 556677655554 444443 3333 333456788999999877543 35445553
No 221
>KOG0974|consensus
Probab=99.44 E-value=3.6e-12 Score=85.89 Aligned_cols=127 Identities=21% Similarity=0.351 Sum_probs=98.9
Q ss_pred eeEeecC-CCceeeEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 2 GTVWDAV-SGEELHSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 2 i~v~d~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
|.+|+.. +..++ .+. |.+.++. +.++-+|.++++.|.|..+++|++.+.+......-+|...+.++.|.|+ .++
T Consensus 157 iivW~~~~dn~p~-~l~GHeG~iF~-i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~ 232 (967)
T KOG0974|consen 157 IIVWKPHEDNKPI-RLKGHEGSIFS-IVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RII 232 (967)
T ss_pred EEEEeccccCCcc-eecccCCceEE-EEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeE
Confidence 5678876 23334 344 5555555 9999999999999999999999999977666566789999999999988 999
Q ss_pred EeeCCCcEEEEecCCCceeEEEe-c-CCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLE-F-GAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~-~-~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
++++|-+.++|+... .....+. | ...+..++..++....+++ .|+.+++||+.
T Consensus 233 t~gedctcrvW~~~~-~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~ 288 (967)
T KOG0974|consen 233 TVGEDCTCRVWGVNG-TQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLN 288 (967)
T ss_pred EeccceEEEEEeccc-ceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhh
Confidence 999999999996543 3333333 2 4568889988887777765 68999999874
No 222
>KOG2445|consensus
Probab=99.44 E-value=3.2e-11 Score=72.21 Aligned_cols=131 Identities=17% Similarity=0.233 Sum_probs=91.0
Q ss_pred CeeEeecCCCc----eeeEEe-eCCCceeeEEEcc--CCcEEEEecCCCeEEEEECCCCCC--------CCeEEeCCCCC
Q psy6446 1 MGTVWDAVSGE----ELHSFQ-HPHIVKSSVHFAT--DSYRLATGSNDKNIRIYDLNKPDA--------EPTVYRGHSSG 65 (134)
Q Consensus 1 ~i~v~d~~~~~----~~~~~~-~~~~~~~~~~~~~--~~~~l~~~~~d~~v~i~~~~~~~~--------~~~~~~~~~~~ 65 (134)
+|.|||..+.. +....+ |...+.. +.|-+ -|+.+++++.|+.+.||.-..... ....+...++.
T Consensus 36 ~vkI~d~~~~s~~W~~Ts~Wrah~~Si~r-V~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~Dsrss 114 (361)
T KOG2445|consen 36 TVKIWDSTSDSGTWSCTSSWRAHDGSIWR-VVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSS 114 (361)
T ss_pred cEEEEeccCCCCceEEeeeEEecCCcEEE-EEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcc
Confidence 57899965332 344455 4555555 88865 689999999999999998632111 11234566789
Q ss_pred EeEEEEee--CCCEEEEeeCCCcEEEEecCCCceeEEE------e--------cCCCCeEEEEccCC---cEEEEecCC-
Q psy6446 66 IKHVQFFK--NNTRLISCAEDKTVRLWDVSASAEVQKL------E--------FGAVPNSLEISRDG---TTITVTHGS- 125 (134)
Q Consensus 66 v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~------~--------~~~~v~~~~~~~~~---~~l~~~~~~- 125 (134)
|+.++|.| -|-.+++++.||.++||+....-.+... . +..+..|+.|+|.. +++++|.+.
T Consensus 115 V~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~ 194 (361)
T KOG2445|consen 115 VTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDED 194 (361)
T ss_pred eeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccC
Confidence 99999999 5778899999999999987654332222 1 23456799999753 578877554
Q ss_pred -----eEEEEeC
Q psy6446 126 -----CVTFLDA 132 (134)
Q Consensus 126 -----~i~i~d~ 132 (134)
.+.||..
T Consensus 195 a~~~~~~~Iye~ 206 (361)
T KOG2445|consen 195 APHLNKVKIYEY 206 (361)
T ss_pred CccccceEEEEe
Confidence 8888864
No 223
>KOG1538|consensus
Probab=99.43 E-value=6.4e-13 Score=86.74 Aligned_cols=99 Identities=16% Similarity=0.308 Sum_probs=82.3
Q ss_pred CceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEE
Q psy6446 21 IVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQK 100 (134)
Q Consensus 21 ~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 100 (134)
.+.. ++|.|||..|+.+.. ..+.+||.+.+... ..+++|...|.+++|+.||+.+++|+.|..+.+|..+ .+-...
T Consensus 14 ci~d-~afkPDGsqL~lAAg-~rlliyD~ndG~ll-qtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~k-lEG~Lk 89 (1081)
T KOG1538|consen 14 CIND-IAFKPDGTQLILAAG-SRLLVYDTSDGTLL-QPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSK-LEGILK 89 (1081)
T ss_pred chhe-eEECCCCceEEEecC-CEEEEEeCCCcccc-cccccccceEEEEEEccCCceeccCCCceeEEEeccc-ccceee
Confidence 4445 999999999888754 57999999987754 6789999999999999999999999999999999753 344455
Q ss_pred EecCCCCeEEEEccCCcEEEEec
Q psy6446 101 LEFGAVPNSLEISRDGTTITVTH 123 (134)
Q Consensus 101 ~~~~~~v~~~~~~~~~~~l~~~~ 123 (134)
..|...|.|+.|+|-...+++++
T Consensus 90 YSH~D~IQCMsFNP~~h~LasCs 112 (1081)
T KOG1538|consen 90 YSHNDAIQCMSFNPITHQLASCS 112 (1081)
T ss_pred eccCCeeeEeecCchHHHhhhcc
Confidence 66888999999999887777653
No 224
>KOG0974|consensus
Probab=99.43 E-value=1.4e-11 Score=83.20 Aligned_cols=129 Identities=16% Similarity=0.213 Sum_probs=101.7
Q ss_pred eeEeecCCCceeeEEeeCCCce--ee--EEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVK--SS--VHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTR 77 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 77 (134)
+.+||...+.....+.+.+... ++ +.++++.-++++|+--+.+.+|+......+ ..+.+|.+.+..+.++.|+++
T Consensus 111 ~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p-~~l~GHeG~iF~i~~s~dg~~ 189 (967)
T KOG0974|consen 111 LLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKP-IRLKGHEGSIFSIVTSLDGRY 189 (967)
T ss_pred EEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCc-ceecccCCceEEEEEccCCcE
Confidence 5677877766666666544432 11 445667778899999999999999854444 367899999999999999999
Q ss_pred EEEeeCCCcEEEEecCCCceeE--EEecCCCCeEEEEccCCcEEEEecCCeEEEEeC
Q psy6446 78 LISCAEDKTVRLWDVSASAEVQ--KLEFGAVPNSLEISRDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~ 132 (134)
+++++.|+++++|++.+.+... .+.|...+..++|+|+ ..+..+.|-+.++|+.
T Consensus 190 i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n-~i~t~gedctcrvW~~ 245 (967)
T KOG0974|consen 190 IASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN-RIITVGEDCTCRVWGV 245 (967)
T ss_pred EEEEecCcceeeeecccccccCcccccccceeEEEEeccc-eeEEeccceEEEEEec
Confidence 9999999999999999887665 4557889999999999 5555578999999954
No 225
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.41 E-value=5.9e-11 Score=76.06 Aligned_cols=129 Identities=17% Similarity=0.152 Sum_probs=85.3
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCC---CeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSND---KNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
|.++|...+.......+...+.. ..|+|+|+.|+....+ ..+++|++.++.. ..+..+.+.+..+.|+|+++.|
T Consensus 172 l~~~d~~g~~~~~l~~~~~~~~~-p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~--~~~~~~~~~~~~~~~spDg~~l 248 (417)
T TIGR02800 172 LQVADYDGANPQTITRSREPILS-PAWSPDGQKLAYVSFESGKPEIYVQDLATGQR--EKVASFPGMNGAPAFSPDGSKL 248 (417)
T ss_pred EEEEcCCCCCCEEeecCCCceec-ccCCCCCCEEEEEEcCCCCcEEEEEECCCCCE--EEeecCCCCccceEECCCCCEE
Confidence 56777654443333334434444 8999999999876543 4799999987543 2334455667789999999877
Q ss_pred EE-eeCCC--cEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEec--C--CeEEEEeCC
Q psy6446 79 IS-CAEDK--TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH--G--SCVTFLDAN 133 (134)
Q Consensus 79 ~~-~~~d~--~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~--~~i~i~d~~ 133 (134)
+. .+.++ .|.+||+.+++......+........|+|+|+.++... + ..|.++|+.
T Consensus 249 ~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~ 310 (417)
T TIGR02800 249 AVSLSKDGNPDIYVMDLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDAD 310 (417)
T ss_pred EEEECCCCCccEEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECC
Confidence 64 44443 58889988776544433444455789999998877542 2 367777764
No 226
>KOG1240|consensus
Probab=99.41 E-value=8.2e-12 Score=85.88 Aligned_cols=124 Identities=17% Similarity=0.281 Sum_probs=89.2
Q ss_pred CCceeeEEe-eCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCC------CeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 9 SGEELHSFQ-HPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAE------PTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 9 ~~~~~~~~~-~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
.|..++.+. |...+.. ++.++ ++.++++|+.||.|++|+.+..... ...+......+..+.+.+.++.++.
T Consensus 1037 ~G~lVAhL~Ehs~~v~k-~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av 1115 (1431)
T KOG1240|consen 1037 RGILVAHLHEHSSAVIK-LAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAV 1115 (1431)
T ss_pred cceEeehhhhccccccc-eeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEE
Confidence 367777776 6555665 66665 5599999999999999998763211 1123334577888999999999999
Q ss_pred eeCCCcEEEEecCCCce-------------------e----------------------------------EEEe---cC
Q psy6446 81 CAEDKTVRLWDVSASAE-------------------V----------------------------------QKLE---FG 104 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~-------------------~----------------------------------~~~~---~~ 104 (134)
++.||.|.+.++..... + ..++ ..
T Consensus 1116 ~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~h 1195 (1431)
T KOG1240|consen 1116 STKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRH 1195 (1431)
T ss_pred EcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccc
Confidence 99999999887754100 0 0000 12
Q ss_pred CCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 105 AVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 105 ~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+.|++++.+|.+.++++| ..|.+.+||++
T Consensus 1196 G~vTSi~idp~~~WlviGts~G~l~lWDLR 1225 (1431)
T KOG1240|consen 1196 GLVTSIVIDPWCNWLVIGTSRGQLVLWDLR 1225 (1431)
T ss_pred cceeEEEecCCceEEEEecCCceEEEEEee
Confidence 467889999999999988 56999999986
No 227
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.40 E-value=8.8e-11 Score=75.91 Aligned_cols=129 Identities=16% Similarity=0.143 Sum_probs=81.3
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCC---CeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSND---KNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
|.++|...............+.. ..|+|||+.|+..+.+ ..|+++|+.++... .+....+......|+||++.|
T Consensus 200 l~i~d~dG~~~~~l~~~~~~~~~-p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~--~lt~~~g~~~~~~wSPDG~~L 276 (448)
T PRK04792 200 LMIADYDGYNEQMLLRSPEPLMS-PAWSPDGRKLAYVSFENRKAEIFVQDIYTQVRE--KVTSFPGINGAPRFSPDGKKL 276 (448)
T ss_pred EEEEeCCCCCceEeecCCCcccC-ceECCCCCEEEEEEecCCCcEEEEEECCCCCeE--EecCCCCCcCCeeECCCCCEE
Confidence 34556543333222334444444 9999999998876432 36888898775432 222233444578999999988
Q ss_pred EE-eeCCCc--EEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEec--C--CeEEEEeCC
Q psy6446 79 IS-CAEDKT--VRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH--G--SCVTFLDAN 133 (134)
Q Consensus 79 ~~-~~~d~~--i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~--~~i~i~d~~ 133 (134)
+. ...++. |.++|+.+++...............|+|||+.++... + ..|.++|++
T Consensus 277 a~~~~~~g~~~Iy~~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~ 338 (448)
T PRK04792 277 ALVLSKDGQPEIYVVDIATKALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLA 338 (448)
T ss_pred EEEEeCCCCeEEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECC
Confidence 64 455554 7888888776544333444567789999999887542 2 357666764
No 228
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.40 E-value=1.6e-10 Score=74.27 Aligned_cols=130 Identities=13% Similarity=0.188 Sum_probs=81.6
Q ss_pred EeecCC---CceeeEEeeCCCceeeEEEccCCcEEEEec-CCCeEEEE--ECCCCCCCCeEEeCCCCCEeEEEEeeCCCE
Q psy6446 4 VWDAVS---GEELHSFQHPHIVKSSVHFATDSYRLATGS-NDKNIRIY--DLNKPDAEPTVYRGHSSGIKHVQFFKNNTR 77 (134)
Q Consensus 4 v~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~v~i~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 77 (134)
+||+.+ ++................|+|||+.|+..+ .+|...+| ++.........+..+...+....|+|||+.
T Consensus 261 ~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~ 340 (428)
T PRK01029 261 SFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKK 340 (428)
T ss_pred EeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCE
Confidence 356554 233333333323333489999999877654 45644444 443222222334444456778999999999
Q ss_pred EEEeeCC---CcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-c---CCeEEEEeCC
Q psy6446 78 LISCAED---KTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-H---GSCVTFLDAN 133 (134)
Q Consensus 78 l~~~~~d---~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~---~~~i~i~d~~ 133 (134)
|+..+.+ ..|.+||+.+++..........+....|+|||+.|+.. . ...|.++|+.
T Consensus 341 Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~ 403 (428)
T PRK01029 341 IAFCSVIKGVRQICVYDLATGRDYQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLI 403 (428)
T ss_pred EEEEEcCCCCcEEEEEECCCCCeEEccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECC
Confidence 8866543 36899999888765443334456789999999887743 2 3578888864
No 229
>KOG4547|consensus
Probab=99.38 E-value=9e-11 Score=75.15 Aligned_cols=128 Identities=9% Similarity=0.074 Sum_probs=104.3
Q ss_pred CeeEeecCCCceeeEEe--eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 1 MGTVWDAVSGEELHSFQ--HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
.|.+|+...|+..+.+. .+...+.++.++.+-..|.+++.|..+..|+..... ......+....+.+++.+||+..+
T Consensus 81 ~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~-~~~~~~~~~~~~~sl~is~D~~~l 159 (541)
T KOG4547|consen 81 SVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKV-IIRIWKEQKPLVSSLCISPDGKIL 159 (541)
T ss_pred cEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccce-eeeeeccCCCccceEEEcCCCCEE
Confidence 36788999999888886 344455558888888999999999999999998754 456677888899999999999999
Q ss_pred EEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccC-----CcEEEEec--CCeEEEEe
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRD-----GTTITVTH--GSCVTFLD 131 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~-----~~~l~~~~--~~~i~i~d 131 (134)
++++ ++|++||+.+.+.+..+. |.++|+++.|-.+ |.+++++. +.-+.+|-
T Consensus 160 ~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~ 218 (541)
T KOG4547|consen 160 LTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWV 218 (541)
T ss_pred Eecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEE
Confidence 9887 579999999999999998 5789999999876 67777653 34555554
No 230
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.35 E-value=2.5e-10 Score=73.57 Aligned_cols=130 Identities=16% Similarity=0.136 Sum_probs=84.3
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEE-ecCCC--eEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLAT-GSNDK--NIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~d~--~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
|.+||+.+++.......... .....|+|+|+.|+. .+.++ .|+++|+.++.. ..+..+........|+||++.+
T Consensus 225 l~~~~l~~g~~~~l~~~~g~-~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~--~~lt~~~~~~~~~~~spDg~~i 301 (430)
T PRK00178 225 IFVQNLDTGRREQITNFEGL-NGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQL--SRVTNHPAIDTEPFWGKDGRTL 301 (430)
T ss_pred EEEEECCCCCEEEccCCCCC-cCCeEECCCCCEEEEEEccCCCceEEEEECCCCCe--EEcccCCCCcCCeEECCCCCEE
Confidence 67888887765443322322 334899999998874 44444 688889887542 2344455566778999999988
Q ss_pred EEeeC-CC--cEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-c-CC--eEEEEeCCC
Q psy6446 79 ISCAE-DK--TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-H-GS--CVTFLDANS 134 (134)
Q Consensus 79 ~~~~~-d~--~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-~~--~i~i~d~~t 134 (134)
+..+. ++ .|.++|+.+++...............|+|+|+.++.. . ++ .|.++|+.+
T Consensus 302 ~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~t 364 (430)
T PRK00178 302 YFTSDRGGKPQIYKVNVNGGRAERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQR 364 (430)
T ss_pred EEEECCCCCceEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCC
Confidence 75553 33 5777788777654333223334567899999988764 2 33 688888753
No 231
>KOG3914|consensus
Probab=99.35 E-value=5.2e-12 Score=77.49 Aligned_cols=98 Identities=22% Similarity=0.324 Sum_probs=76.0
Q ss_pred eEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEee
Q psy6446 3 TVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCA 82 (134)
Q Consensus 3 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 82 (134)
.+|....+.+...+.|-..... ++|+||+++|+++.+|..|++-.+.........+.||..-|..++.-++ +.|++++
T Consensus 135 di~s~~~~~~~~~lGhvSml~d-VavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~-~~LlS~s 212 (390)
T KOG3914|consen 135 DILSADSGRCEPILGHVSMLLD-VAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN-YLLLSGS 212 (390)
T ss_pred eeecccccCcchhhhhhhhhhe-eeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccC-ceeeecC
Confidence 3444444555545545555555 9999999999999999999998776655555567799999999998754 4589999
Q ss_pred CCCcEEEEecCCCceeEEEe
Q psy6446 83 EDKTVRLWDVSASAEVQKLE 102 (134)
Q Consensus 83 ~d~~i~~~d~~~~~~~~~~~ 102 (134)
.|+++++||+.+++++..+.
T Consensus 213 GD~tlr~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 213 GDKTLRLWDITSGKLLDTCD 232 (390)
T ss_pred CCCcEEEEecccCCcccccc
Confidence 99999999999999876554
No 232
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.35 E-value=4e-10 Score=72.90 Aligned_cols=129 Identities=17% Similarity=0.142 Sum_probs=81.7
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEE-ecCCCe--EEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLAT-GSNDKN--IRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~d~~--v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
|++||+.+++.......... .....|+|+|+.|+. .+.++. |+++|+.++.. ..+..+........|+||++.+
T Consensus 244 L~~~dl~tg~~~~lt~~~g~-~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~--~~lt~~~~~~~~p~wSpDG~~I 320 (448)
T PRK04792 244 IFVQDIYTQVREKVTSFPGI-NGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKAL--TRITRHRAIDTEPSWHPDGKSL 320 (448)
T ss_pred EEEEECCCCCeEEecCCCCC-cCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCe--EECccCCCCccceEECCCCCEE
Confidence 67888887765433222222 234899999998865 455564 77778876432 2334455566788999999988
Q ss_pred EEeeC-CC--cEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-c-CC--eEEEEeCC
Q psy6446 79 ISCAE-DK--TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-H-GS--CVTFLDAN 133 (134)
Q Consensus 79 ~~~~~-d~--~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-~~--~i~i~d~~ 133 (134)
+..+. ++ .|.++|+.+++..............+|+|||++++.. . ++ .|.++|+.
T Consensus 321 ~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~ 382 (448)
T PRK04792 321 IFTSERGGKPQIYRVNLASGKVSRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLE 382 (448)
T ss_pred EEEECCCCCceEEEEECCCCCEEEEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECC
Confidence 75543 33 4667777777654432233334567899999888754 2 33 56666764
No 233
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.34 E-value=1.1e-10 Score=73.56 Aligned_cols=101 Identities=17% Similarity=0.252 Sum_probs=76.1
Q ss_pred cEE-EEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEE
Q psy6446 33 YRL-ATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLE 111 (134)
Q Consensus 33 ~~l-~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~ 111 (134)
+++ ++-..++.|.+.|..+.+.. ..+......-..+.++||+++++..+.|+.+.++|+.+.+.+..+.......+++
T Consensus 6 ~l~~V~~~~~~~v~viD~~t~~~~-~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~~~i~ 84 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGATNKVV-ARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNPRGIA 84 (369)
T ss_dssp GEEEEEEGGGTEEEEEETTT-SEE-EEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEEEEEE
T ss_pred cEEEEEecCCCEEEEEECCCCeEE-EEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCcceEE
Confidence 444 45566899999999885543 3444333334557899999999999999999999999999999999888889999
Q ss_pred EccCCcEEEEe--cCCeEEEEeCCC
Q psy6446 112 ISRDGTTITVT--HGSCVTFLDANS 134 (134)
Q Consensus 112 ~~~~~~~l~~~--~~~~i~i~d~~t 134 (134)
+++||++++++ ..+.+.++|.+|
T Consensus 85 ~s~DG~~~~v~n~~~~~v~v~D~~t 109 (369)
T PF02239_consen 85 VSPDGKYVYVANYEPGTVSVIDAET 109 (369)
T ss_dssp E--TTTEEEEEEEETTEEEEEETTT
T ss_pred EcCCCCEEEEEecCCCceeEecccc
Confidence 99999998876 469999999865
No 234
>KOG1587|consensus
Probab=99.33 E-value=2.9e-10 Score=74.45 Aligned_cols=127 Identities=20% Similarity=0.260 Sum_probs=90.8
Q ss_pred eeEeecCCC-ceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCC-----CeEEeCCCCCEeEEEEeeC
Q psy6446 2 GTVWDAVSG-EELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAE-----PTVYRGHSSGIKHVQFFKN 74 (134)
Q Consensus 2 i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~ 74 (134)
+.+|++... .+...+.....+.+ +.|+| +.+.++.|..+|+|.+||++.+... ......|..++..+.|..+
T Consensus 224 ~~vW~~~~p~~Pe~~~~~~s~v~~-~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~ 302 (555)
T KOG1587|consen 224 LLVWSLKNPNTPELVLESPSEVTC-LKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQN 302 (555)
T ss_pred EEEEecCCCCCceEEEecCCceeE-EEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEecc
Confidence 679999865 56666666666555 99999 7788899999999999999876542 1223468889999999774
Q ss_pred C--CEEEEeeCCCcEEEEecCCCceeEEE------e-------cCCCCeEEEEccCC--cEEEEecCCeEEE
Q psy6446 75 N--TRLISCAEDKTVRLWDVSASAEVQKL------E-------FGAVPNSLEISRDG--TTITVTHGSCVTF 129 (134)
Q Consensus 75 ~--~~l~~~~~d~~i~~~d~~~~~~~~~~------~-------~~~~v~~~~~~~~~--~~l~~~~~~~i~i 129 (134)
. .-+++++.||.|..|+++.-...... . ....+.+++|.+.. .+++.+.+|.|..
T Consensus 303 ~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~ 374 (555)
T KOG1587|consen 303 EHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYK 374 (555)
T ss_pred CCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEE
Confidence 4 44899999999999988754331111 1 12356889998865 3444446687765
No 235
>KOG1587|consensus
Probab=99.33 E-value=2.4e-11 Score=79.37 Aligned_cols=114 Identities=11% Similarity=0.105 Sum_probs=85.1
Q ss_pred CCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeC-CCEEEEeeCCCcEEEEecCCCc--
Q psy6446 20 HIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKN-NTRLISCAEDKTVRLWDVSASA-- 96 (134)
Q Consensus 20 ~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~-- 96 (134)
...+.++.++|-+..++..+.|..+++|.......+...+..+...+++++|||. ...++++..||.+.+||+....
T Consensus 398 ~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~ 477 (555)
T KOG1587|consen 398 IGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEE 477 (555)
T ss_pred CcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccC
Confidence 3444459999966666555559999999987444455556677778999999994 5667888899999999997544
Q ss_pred eeEEEec-CCCCeEEEEccCCcEEEEec-CCeEEEEeCC
Q psy6446 97 EVQKLEF-GAVPNSLEISRDGTTITVTH-GSCVTFLDAN 133 (134)
Q Consensus 97 ~~~~~~~-~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~ 133 (134)
+...... ......+.|+++|+.+++|. .|++++|++.
T Consensus 478 Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~ 516 (555)
T KOG1587|consen 478 PVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLS 516 (555)
T ss_pred CcccccccccccceeecCCCCcEEEEecCCCcEEEEEcC
Confidence 3333332 34557788899999999985 5999999974
No 236
>KOG1310|consensus
Probab=99.32 E-value=9e-12 Score=79.75 Aligned_cols=131 Identities=22% Similarity=0.300 Sum_probs=97.2
Q ss_pred eeEeecCCCceeeEEe-eCCCceeeEEEcc--CCcEEEEecCCCeEEEEECCC---------CCCCCeEEeCCCCCEeEE
Q psy6446 2 GTVWDAVSGEELHSFQ-HPHIVKSSVHFAT--DSYRLATGSNDKNIRIYDLNK---------PDAEPTVYRGHSSGIKHV 69 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~l~~~~~d~~v~i~~~~~---------~~~~~~~~~~~~~~v~~~ 69 (134)
+.|||....+++..+. ++..-+.++.|-| +.+.+++|..|..|+++|+.. .......+..|...|..+
T Consensus 74 ~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKri 153 (758)
T KOG1310|consen 74 LIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRI 153 (758)
T ss_pred EEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhhe
Confidence 5799999889988887 4444444499988 556788999999999999984 223334566788899999
Q ss_pred EEeeCC-CEEEEeeCCCcEEEEecCCCcee-EE--Ee------c--CCCCeEEEEccCC-cEEEEe-cCCeEEEEeC
Q psy6446 70 QFFKNN-TRLISCAEDKTVRLWDVSASAEV-QK--LE------F--GAVPNSLEISRDG-TTITVT-HGSCVTFLDA 132 (134)
Q Consensus 70 ~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~-~~--~~------~--~~~v~~~~~~~~~-~~l~~~-~~~~i~i~d~ 132 (134)
+-.|++ ..+.++++||+++-+|++....- .. .. + --...|+..+|.. .++++| ++-..++||.
T Consensus 154 a~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~ 230 (758)
T KOG1310|consen 154 ATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDR 230 (758)
T ss_pred ecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhh
Confidence 999987 77889999999999999863211 11 10 1 1234688999976 456666 5678888884
No 237
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.32 E-value=7.3e-10 Score=71.33 Aligned_cols=132 Identities=13% Similarity=0.065 Sum_probs=78.4
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecC-CC--eE--EEEECCCC--CCCCeEEeCCCCCEeEEEEeeC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSN-DK--NI--RIYDLNKP--DAEPTVYRGHSSGIKHVQFFKN 74 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~--~v--~i~~~~~~--~~~~~~~~~~~~~v~~~~~~~~ 74 (134)
|.+.++.+++............. ..|+|||+.|+..+. +| .+ ..|++..+ ...........+.....+|+||
T Consensus 213 I~~~~l~~g~~~~lt~~~g~~~~-p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPD 291 (428)
T PRK01029 213 IFLGSLENPAGKKILALQGNQLM-PTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPD 291 (428)
T ss_pred EEEEECCCCCceEeecCCCCccc-eEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCC
Confidence 56677776665443333333344 899999998876543 23 23 33666542 1222222233334567899999
Q ss_pred CCEEEEee-CCCcEEEE--ecCC-CceeEEEe-cCCCCeEEEEccCCcEEEEe-c---CCeEEEEeCCC
Q psy6446 75 NTRLISCA-EDKTVRLW--DVSA-SAEVQKLE-FGAVPNSLEISRDGTTITVT-H---GSCVTFLDANS 134 (134)
Q Consensus 75 ~~~l~~~~-~d~~i~~~--d~~~-~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~---~~~i~i~d~~t 134 (134)
|+.|+..+ .++...+| ++.. +.....+. ....+....|+|||+.|+.. . ...|.+||+.+
T Consensus 292 G~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~ 360 (428)
T PRK01029 292 GTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLAT 360 (428)
T ss_pred CCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCC
Confidence 99887654 45654455 4432 22233333 23456788999999988754 2 24799999753
No 238
>KOG3914|consensus
Probab=99.30 E-value=1.4e-10 Score=71.44 Aligned_cols=107 Identities=11% Similarity=0.191 Sum_probs=77.8
Q ss_pred EEEccCCcEEEEecCCC---eEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe
Q psy6446 26 VHFATDSYRLATGSNDK---NIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE 102 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~d~---~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 102 (134)
+.|..+......+...| .+.+|....+.. ....+|-.-+.+++++||+++++++..|..|++-.......+..+.
T Consensus 113 i~~~~~~~sv~v~dkagD~~~~di~s~~~~~~--~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Iesfc 190 (390)
T KOG3914|consen 113 ISFIREDTSVLVADKAGDVYSFDILSADSGRC--EPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFC 190 (390)
T ss_pred eeeeeccceEEEEeecCCceeeeeecccccCc--chhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhc
Confidence 55555555555444444 444444443332 3456899999999999999999999999999998877665555444
Q ss_pred --cCCCCeEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 103 --FGAVPNSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 103 --~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
|..-|..++.-++..++.+|+|++|++||+++
T Consensus 191 lGH~eFVS~isl~~~~~LlS~sGD~tlr~Wd~~s 224 (390)
T KOG3914|consen 191 LGHKEFVSTISLTDNYLLLSGSGDKTLRLWDITS 224 (390)
T ss_pred cccHhheeeeeeccCceeeecCCCCcEEEEeccc
Confidence 67789999988776655567899999999864
No 239
>KOG4227|consensus
Probab=99.30 E-value=2.3e-10 Score=71.01 Aligned_cols=131 Identities=15% Similarity=0.178 Sum_probs=97.4
Q ss_pred eeEeecC------CCceeeEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEe--CCCCCEeEEEEe
Q psy6446 2 GTVWDAV------SGEELHSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYR--GHSSGIKHVQFF 72 (134)
Q Consensus 2 i~v~d~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~--~~~~~v~~~~~~ 72 (134)
+++|++. +.+++.... ++..-+.|++|+...+++++|..+++|...|+.+.+.+. .+. ...+.|..+..+
T Consensus 80 ~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~-V~~~~~~~~~VY~m~~~ 158 (609)
T KOG4227|consen 80 GRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIY-VANENNNRGDVYHMDQH 158 (609)
T ss_pred eeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeecccceeee-eecccCcccceeecccC
Confidence 4688873 346666555 343455559999989999999999999999999865432 222 234589999999
Q ss_pred eCCCEEEEeeCCCcEEEEecCCCc-ee---EEEecCCCCeEEEEccCCcEEE-Ee-cCCeEEEEeCC
Q psy6446 73 KNNTRLISCAEDKTVRLWDVSASA-EV---QKLEFGAVPNSLEISRDGTTIT-VT-HGSCVTFLDAN 133 (134)
Q Consensus 73 ~~~~~l~~~~~d~~i~~~d~~~~~-~~---~~~~~~~~v~~~~~~~~~~~l~-~~-~~~~i~i~d~~ 133 (134)
|..+.+++.+.++.+.+||.+... +. .....+.....+.|+|....|+ +. ..+.+-+||.+
T Consensus 159 P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R 225 (609)
T KOG4227|consen 159 PTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRR 225 (609)
T ss_pred CCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeec
Confidence 999999999999999999998755 22 2222456678899999876544 43 45888899976
No 240
>KOG4714|consensus
Probab=99.30 E-value=2.8e-11 Score=71.02 Aligned_cols=72 Identities=21% Similarity=0.427 Sum_probs=62.6
Q ss_pred eeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee-CCCEEEEeeCCCcEEEEecCC
Q psy6446 23 KSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK-NNTRLISCAEDKTVRLWDVSA 94 (134)
Q Consensus 23 ~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~ 94 (134)
+.+++-+| +...+++|+.||.+-+||.+....+...++.|+.++..+-|+| ++..|+++++||.+..||-.+
T Consensus 182 v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 182 VTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred chhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 55578788 4566788899999999999998777777899999999999999 788999999999999999763
No 241
>KOG2321|consensus
Probab=99.30 E-value=1.1e-10 Score=75.15 Aligned_cols=129 Identities=15% Similarity=0.275 Sum_probs=97.1
Q ss_pred eeEeecCCCceeeEEeeCC-----------CceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPH-----------IVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQ 70 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~ 70 (134)
|..||.++...+..+.... ..++++.|+.+|-.+++|..+|.+.|||++...+....-.+..-+|..+.
T Consensus 199 VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~ 278 (703)
T KOG2321|consen 199 VEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLD 278 (703)
T ss_pred EEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeec
Confidence 6789998877776665221 23566999999999999999999999999997665433334456789999
Q ss_pred EeeC--CCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEe
Q psy6446 71 FFKN--NTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLD 131 (134)
Q Consensus 71 ~~~~--~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d 131 (134)
|.+. +..+++. ....++|||-.+|+....+.....++.+++-|++-.++.+ .+..+..|-
T Consensus 279 ~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiEpt~~lND~C~~p~sGm~f~Ane~~~m~~yy 341 (703)
T KOG2321|consen 279 WQDTDQQNKVVSM-DKRILKIWDECTGKPMASIEPTSDLNDFCFVPGSGMFFTANESSKMHTYY 341 (703)
T ss_pred ccccCCCceEEec-chHHhhhcccccCCceeeccccCCcCceeeecCCceEEEecCCCcceeEE
Confidence 9875 3344433 3357999999999999988888889999999998777766 445555553
No 242
>KOG2315|consensus
Probab=99.29 E-value=8.3e-10 Score=70.72 Aligned_cols=126 Identities=12% Similarity=0.136 Sum_probs=88.7
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEe--cCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATG--SNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+++++++..++.-.+...+++ .++.|+|+++.+++. -.-..+.++|++-. + .+.--.++-+++-|+|.|++++
T Consensus 253 Lyll~t~g~s~~V~L~k~GPV-hdv~W~~s~~EF~VvyGfMPAkvtifnlr~~--~--v~df~egpRN~~~fnp~g~ii~ 327 (566)
T KOG2315|consen 253 LYLLATQGESVSVPLLKEGPV-HDVTWSPSGREFAVVYGFMPAKVTIFNLRGK--P--VFDFPEGPRNTAFFNPHGNIIL 327 (566)
T ss_pred EEEEEecCceEEEecCCCCCc-eEEEECCCCCEEEEEEecccceEEEEcCCCC--E--eEeCCCCCccceEECCCCCEEE
Confidence 455555533344444444444 459999999887664 44568999998752 2 2333557778999999999988
Q ss_pred EeeC---CCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe--c-----CCeEEEEeCC
Q psy6446 80 SCAE---DKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT--H-----GSCVTFLDAN 133 (134)
Q Consensus 80 ~~~~---d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~-----~~~i~i~d~~ 133 (134)
.++- .|.+-+||..+.+++..+.... .+-..|+|||++++++ . |+.++||+..
T Consensus 328 lAGFGNL~G~mEvwDv~n~K~i~~~~a~~-tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt 390 (566)
T KOG2315|consen 328 LAGFGNLPGDMEVWDVPNRKLIAKFKAAN-TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT 390 (566)
T ss_pred EeecCCCCCceEEEeccchhhccccccCC-ceEEEEcCCCcEEEEEeccccEEecCCeEEEEec
Confidence 6654 4789999999977777665432 3567899999988864 2 6889999863
No 243
>KOG4497|consensus
Probab=99.29 E-value=3.1e-10 Score=68.87 Aligned_cols=128 Identities=18% Similarity=0.201 Sum_probs=84.2
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEE-EecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLA-TGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS 80 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 80 (134)
|.+|++...+-...++.....++++.|+|+|+.|+ +...+-.|.+|.+.+.... .+......+..++|+|+|++.+.
T Consensus 73 vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~--~~~~pK~~~kg~~f~~dg~f~ai 150 (447)
T KOG4497|consen 73 VQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGY--LLPHPKTNVKGYAFHPDGQFCAI 150 (447)
T ss_pred EEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeE--EecccccCceeEEECCCCceeee
Confidence 67899887777777775555555699999997665 5556889999999985533 22333455688999999998876
Q ss_pred eeCCC------------------------------------cEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-c
Q psy6446 81 CAEDK------------------------------------TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-H 123 (134)
Q Consensus 81 ~~~d~------------------------------------~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~ 123 (134)
.++.. .+.+||---.-.+.....+-.+..++|+|.++++++| .
T Consensus 151 ~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~~lG~k~v~wsP~~qflavGsy 230 (447)
T KOG4497|consen 151 LSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYERGLGLKFVEWSPCNQFLAVGSY 230 (447)
T ss_pred eecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeeeeccceeEEEeccccceEEeecc
Confidence 65421 1122221111111122223456788899999999887 5
Q ss_pred CCeEEEEe
Q psy6446 124 GSCVTFLD 131 (134)
Q Consensus 124 ~~~i~i~d 131 (134)
|+.+++.|
T Consensus 231 D~~lrvln 238 (447)
T KOG4497|consen 231 DQMLRVLN 238 (447)
T ss_pred chhhhhhc
Confidence 77777654
No 244
>KOG1517|consensus
Probab=99.28 E-value=1.6e-10 Score=79.05 Aligned_cols=130 Identities=12% Similarity=0.226 Sum_probs=93.3
Q ss_pred CeeEeecCCCc---eeeEEe-eCCC--ceeeEEEccCCc-EEEEecCCCeEEEEECCCCC-CCCeEEeCCC--C-CEeEE
Q psy6446 1 MGTVWDAVSGE---ELHSFQ-HPHI--VKSSVHFATDSY-RLATGSNDKNIRIYDLNKPD-AEPTVYRGHS--S-GIKHV 69 (134)
Q Consensus 1 ~i~v~d~~~~~---~~~~~~-~~~~--~~~~~~~~~~~~-~l~~~~~d~~v~i~~~~~~~-~~~~~~~~~~--~-~v~~~ 69 (134)
+|++||.+... .+...+ |... ++. +.+.+.|- .|++|+.+|.|++||++... ........|. + ..+++
T Consensus 1232 svRvyD~R~a~~ds~v~~~R~h~~~~~Iv~-~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal 1310 (1387)
T KOG1517|consen 1232 SVRVYDRRMAPPDSLVCVYREHNDVEPIVH-LSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTAL 1310 (1387)
T ss_pred ceEEeecccCCccccceeecccCCccccee-EEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceee
Confidence 47899987443 344454 4433 666 88888654 49999999999999999842 1111122222 3 59999
Q ss_pred EEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe--------cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 70 QFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE--------FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 70 ~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
..+++...+++|+. +.|+||++...+ +..+. ....+.|++|+|....+++| .|..|.+|..+
T Consensus 1311 ~VH~hapiiAsGs~-q~ikIy~~~G~~-l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~ 1381 (1387)
T KOG1517|consen 1311 TVHEHAPIIASGSA-QLIKIYSLSGEQ-LNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCE 1381 (1387)
T ss_pred eeccCCCeeeecCc-ceEEEEecChhh-hcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecC
Confidence 99999999999998 899999986433 22222 12457899999998888887 57999999754
No 245
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.24 E-value=1e-09 Score=69.64 Aligned_cols=117 Identities=12% Similarity=0.177 Sum_probs=92.4
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEe
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISC 81 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 81 (134)
+-|||..+++.....+.-+.+.. +..+++|+.++++.....+.+.|+.++... ..-+...+-|+...|+|++++++-+
T Consensus 384 l~iyd~~~~e~kr~e~~lg~I~a-v~vs~dGK~~vvaNdr~el~vididngnv~-~idkS~~~lItdf~~~~nsr~iAYa 461 (668)
T COG4946 384 LGIYDKDGGEVKRIEKDLGNIEA-VKVSPDGKKVVVANDRFELWVIDIDNGNVR-LIDKSEYGLITDFDWHPNSRWIAYA 461 (668)
T ss_pred EEEEecCCceEEEeeCCccceEE-EEEcCCCcEEEEEcCceEEEEEEecCCCee-EecccccceeEEEEEcCCceeEEEe
Confidence 56888877765544445555555 999999999999999999999999987643 3345566889999999999999987
Q ss_pred eCCC----cEEEEecCCCceeEEEecCCCCeEEEEccCCcEEE
Q psy6446 82 AEDK----TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTIT 120 (134)
Q Consensus 82 ~~d~----~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 120 (134)
-.+| .|+++|+.+++..........-.+-+|.|++++|.
T Consensus 462 fP~gy~tq~Iklydm~~~Kiy~vTT~ta~DfsPaFD~d~ryLY 504 (668)
T COG4946 462 FPEGYYTQSIKLYDMDGGKIYDVTTPTAYDFSPAFDPDGRYLY 504 (668)
T ss_pred cCcceeeeeEEEEecCCCeEEEecCCcccccCcccCCCCcEEE
Confidence 7665 58999999888877666566667889999998765
No 246
>KOG4532|consensus
Probab=99.24 E-value=3.6e-09 Score=62.72 Aligned_cols=112 Identities=15% Similarity=0.131 Sum_probs=83.9
Q ss_pred eeeEEEccCCcEEEEecCCCeEEEEECCCCCCCC-e-EEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEE
Q psy6446 23 KSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEP-T-VYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQK 100 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~-~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 100 (134)
...+..+++++++++.+....|..|.++...... . ........-.+..|+.....++++..||++.+||++.......
T Consensus 161 ~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~ 240 (344)
T KOG4532|consen 161 QNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMA 240 (344)
T ss_pred eeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchh
Confidence 4449999999999999999999999987644322 2 1223344557888999899999999999999999987543332
Q ss_pred Ee------cCCCCeEEEEccCCc--EEEEec-CCeEEEEeCCC
Q psy6446 101 LE------FGAVPNSLEISRDGT--TITVTH-GSCVTFLDANS 134 (134)
Q Consensus 101 ~~------~~~~v~~~~~~~~~~--~l~~~~-~~~i~i~d~~t 134 (134)
.. +.+.++.+.|++-|. +|+.+. -+.+++.|+++
T Consensus 241 ~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~ 283 (344)
T KOG4532|consen 241 EISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRN 283 (344)
T ss_pred hhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEccc
Confidence 21 567899999998774 555564 48899998874
No 247
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=99.22 E-value=3.9e-09 Score=68.23 Aligned_cols=119 Identities=16% Similarity=0.197 Sum_probs=82.2
Q ss_pred eeEEeeCCCceeeEEEcc-CCcEEEEe----cCCCe----EEEEECCCCCC--CCeEEeCCCCCEeEEEEeeCCCEEEEe
Q psy6446 13 LHSFQHPHIVKSSVHFAT-DSYRLATG----SNDKN----IRIYDLNKPDA--EPTVYRGHSSGIKHVQFFKNNTRLISC 81 (134)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~-~~~~l~~~----~~d~~----v~i~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~ 81 (134)
+..++.+...+. +.|+. +++.+.+. +.+|. -++|+....+. ....--..+..+.+.+++|+...++.|
T Consensus 199 L~yirTE~dPl~-~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlG 277 (545)
T PF11768_consen 199 LSYIRTENDPLD-VEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLG 277 (545)
T ss_pred EEEEEecCCcEE-EEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEE
Confidence 333445556666 88887 45555543 33443 34566544321 111122466789999999999999999
Q ss_pred eCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecC-CeEEEEeCC
Q psy6446 82 AEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHG-SCVTFLDAN 133 (134)
Q Consensus 82 ~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~i~i~d~~ 133 (134)
..||.|.+||...+.... ....-.+..++|+|+|..++++++ |.+.+||+.
T Consensus 278 C~DgSiiLyD~~~~~t~~-~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 278 CEDGSIILYDTTRGVTLL-AKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred ecCCeEEEEEcCCCeeee-eeecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence 999999999987653332 244566789999999999888755 999999973
No 248
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.22 E-value=1.2e-10 Score=49.90 Aligned_cols=39 Identities=31% Similarity=0.536 Sum_probs=34.7
Q ss_pred CceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEE
Q psy6446 10 GEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYD 48 (134)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~ 48 (134)
++++..++++...+.+++|+|+++.|++++.|+.|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 467888997777777799999999999999999999997
No 249
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.21 E-value=7.5e-11 Score=50.55 Aligned_cols=36 Identities=36% Similarity=0.668 Sum_probs=33.7
Q ss_pred CeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEe
Q psy6446 56 PTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWD 91 (134)
Q Consensus 56 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 91 (134)
...+.+|.+.|.+++|+|+++.+++++.|+.|++||
T Consensus 4 ~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 4 VRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred EEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 356889999999999999999999999999999997
No 250
>KOG4547|consensus
Probab=99.21 E-value=4e-09 Score=67.87 Aligned_cols=132 Identities=14% Similarity=0.184 Sum_probs=102.0
Q ss_pred eeEeecCCCceeeEEe---eCCCceeeEEEcc--------------------CCcEEEEecCCCeEEEEECCCCCCCCeE
Q psy6446 2 GTVWDAVSGEELHSFQ---HPHIVKSSVHFAT--------------------DSYRLATGSNDKNIRIYDLNKPDAEPTV 58 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~---~~~~~~~~~~~~~--------------------~~~~l~~~~~d~~v~i~~~~~~~~~~~~ 58 (134)
+++||...++....|. +......+..|.- +-..++-|...|.|.+|+...++.....
T Consensus 17 l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~ys~~~g~it~~~ 96 (541)
T KOG4547|consen 17 LRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLLYSVAGGEITAKL 96 (541)
T ss_pred EEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEEEEecCCeEEEEE
Confidence 7899999998877775 2222222244431 2235778888999999999887644333
Q ss_pred E-eCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEec-CCCCeEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 59 Y-RGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEF-GAVPNSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 59 ~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
. ..|.+.|.++.++.+-..|.+++.|..+..|+....+.++.... ...+.+++.+|||..++++ .++|.+||+++
T Consensus 97 st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~a-s~~ik~~~~~~ 173 (541)
T KOG4547|consen 97 STDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTA-SRQIKVLDIET 173 (541)
T ss_pred ecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEec-cceEEEEEccC
Confidence 2 47899999999998889999999999999999999998888875 4567899999998877664 47899999874
No 251
>KOG0644|consensus
Probab=99.20 E-value=7.2e-12 Score=83.47 Aligned_cols=87 Identities=25% Similarity=0.447 Sum_probs=76.4
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEe
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISC 81 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 81 (134)
++||.+.++.++..+.++..-++-++.+.+..++++++.|..|++|.+..+.. ...+.+|.+.|++++|+|-. +.
T Consensus 214 vKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~p-vsvLrghtgavtaiafsP~~----ss 288 (1113)
T KOG0644|consen 214 VKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAP-VSVLRGHTGAVTAIAFSPRA----SS 288 (1113)
T ss_pred eeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCch-HHHHhccccceeeeccCccc----cC
Confidence 68999999999999996666666699999888999999999999999998654 46789999999999999965 67
Q ss_pred eCCCcEEEEecC
Q psy6446 82 AEDKTVRLWDVS 93 (134)
Q Consensus 82 ~~d~~i~~~d~~ 93 (134)
+.||++++||.+
T Consensus 289 s~dgt~~~wd~r 300 (1113)
T KOG0644|consen 289 SDDGTCRIWDAR 300 (1113)
T ss_pred CCCCceEecccc
Confidence 889999999987
No 252
>KOG0280|consensus
Probab=99.20 E-value=2.4e-10 Score=68.17 Aligned_cols=101 Identities=15% Similarity=0.200 Sum_probs=77.0
Q ss_pred EeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCC-CeEEeCCCCCEeEEEEee-CCCEEEEeeCCCcEEEEec
Q psy6446 16 FQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAE-PTVYRGHSSGIKHVQFFK-NNTRLISCAEDKTVRLWDV 92 (134)
Q Consensus 16 ~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~ 92 (134)
.+.++.......|+. +.+.+.+|+.|+.+..||++.+... ....+.|...|.++.-+| .+.++++|+.|..|++||.
T Consensus 161 wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~Dt 240 (339)
T KOG0280|consen 161 WKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDT 240 (339)
T ss_pred ccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeeh
Confidence 343444444467766 5678899999999999999954322 222456888999999887 6789999999999999999
Q ss_pred C-CCceeEEEecCCCCeEEEEccCC
Q psy6446 93 S-ASAEVQKLEFGAVPNSLEISRDG 116 (134)
Q Consensus 93 ~-~~~~~~~~~~~~~v~~~~~~~~~ 116 (134)
+ -++++..-...+.|..++++|.-
T Consensus 241 Rnm~kPl~~~~v~GGVWRi~~~p~~ 265 (339)
T KOG0280|consen 241 RNMGKPLFKAKVGGGVWRIKHHPEI 265 (339)
T ss_pred hcccCccccCccccceEEEEecchh
Confidence 9 46777766677888899988853
No 253
>KOG1334|consensus
Probab=99.17 E-value=1.7e-10 Score=72.92 Aligned_cols=120 Identities=17% Similarity=0.311 Sum_probs=95.1
Q ss_pred eEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee--CCCEEEEeeCCCcEEEEe
Q psy6446 14 HSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK--NNTRLISCAEDKTVRLWD 91 (134)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d 91 (134)
..+..+.+.+..+.|+..|..|++|+.|..+.+||............+|...|.+..|.| +.+.+++++.||.+++-.
T Consensus 136 ~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~ 215 (559)
T KOG1334|consen 136 KKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSE 215 (559)
T ss_pred hcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeee
Confidence 345544455555999999999999999999999999887777777789999999999999 567899999999999887
Q ss_pred cCCCcee----EEEecCCCCeEEEEccCCcE--EEEecCCeEEEEeCC
Q psy6446 92 VSASAEV----QKLEFGAVPNSLEISRDGTT--ITVTHGSCVTFLDAN 133 (134)
Q Consensus 92 ~~~~~~~----~~~~~~~~v~~~~~~~~~~~--l~~~~~~~i~i~d~~ 133 (134)
+...... +.-+|.+++..++.-|+..+ +.+|.|+.+.-+|++
T Consensus 216 i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr 263 (559)
T KOG1334|consen 216 ILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLR 263 (559)
T ss_pred eccccceecceecccccCccceeeecCCCCCcccccccccceeeeeec
Confidence 7543322 23347889999999998753 445678888888875
No 254
>KOG1963|consensus
Probab=99.13 E-value=8.5e-09 Score=69.07 Aligned_cols=117 Identities=17% Similarity=0.221 Sum_probs=90.3
Q ss_pred EEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecC
Q psy6446 15 SFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVS 93 (134)
Q Consensus 15 ~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 93 (134)
.+. |+..+.. +.|+++|.+|++|+..+.+.+|.+.+++ .+.+.--.++|..+.++||+...+...+|+.|.+....
T Consensus 246 ~lHWH~~~V~~-L~fS~~G~~LlSGG~E~VLv~Wq~~T~~--kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~ 322 (792)
T KOG1963|consen 246 LLHWHHDEVNS-LSFSSDGAYLLSGGREGVLVLWQLETGK--KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKAS 322 (792)
T ss_pred EEEecccccce-eEEecCCceEeecccceEEEEEeecCCC--cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEecc
Confidence 344 5556666 9999999999999999999999999876 34566677899999999999999999999999998776
Q ss_pred CCceeEEEec------------CCCCeEEEEccCC-cEEEEecCCeEEEEeCCC
Q psy6446 94 ASAEVQKLEF------------GAVPNSLEISRDG-TTITVTHGSCVTFLDANS 134 (134)
Q Consensus 94 ~~~~~~~~~~------------~~~v~~~~~~~~~-~~l~~~~~~~i~i~d~~t 134 (134)
+......+.. ..-.+.++++|-. ..++.+..|.|.+||+-+
T Consensus 323 dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~t 376 (792)
T KOG1963|consen 323 DLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYT 376 (792)
T ss_pred chhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccc
Confidence 5444333321 2335678889844 444556789999999753
No 255
>KOG1524|consensus
Probab=99.12 E-value=2.7e-09 Score=68.67 Aligned_cols=99 Identities=19% Similarity=0.150 Sum_probs=71.2
Q ss_pred eeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCc
Q psy6446 17 QHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASA 96 (134)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 96 (134)
+.+.+.+-++.|++..+.+++|+.|-..++||-.. .. ...-..|..+|++++|+|+ ..++.++. ++++
T Consensus 183 kAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G-~~-Lf~S~~~ey~ITSva~npd-~~~~v~S~-nt~R-------- 250 (737)
T KOG1524|consen 183 RAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQG-AN-LFTSAAEEYAITSVAFNPE-KDYLLWSY-NTAR-------- 250 (737)
T ss_pred eccCcEEEEeecCccccceeecCCceeEEeecccC-cc-cccCChhccceeeeeeccc-cceeeeee-eeee--------
Confidence 34556666699999999999999999999999764 22 2344578899999999999 44444443 2333
Q ss_pred eeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEE
Q psy6446 97 EVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTF 129 (134)
Q Consensus 97 ~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i 129 (134)
..-+..+.|..++|++||..++++ +.|.+.+
T Consensus 251 --~~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 251 --FSSPRVGSIFNLSWSADGTQATCGTSTGQLIV 282 (737)
T ss_pred --ecCCCccceEEEEEcCCCceeeccccCceEEE
Confidence 111234668899999999999886 4565543
No 256
>KOG4497|consensus
Probab=99.09 E-value=3.1e-09 Score=64.69 Aligned_cols=130 Identities=18% Similarity=0.202 Sum_probs=89.1
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCC------------------------C--
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDA------------------------E-- 55 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~------------------------~-- 55 (134)
+.|||..-.-.+..++..-++.. +.|+|.+++|++|+.|+.+++.+--+.+. +
T Consensus 193 laVwd~~Leykv~aYe~~lG~k~-v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~q 271 (447)
T KOG4497|consen 193 LAVWDNVLEYKVYAYERGLGLKF-VEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQ 271 (447)
T ss_pred EEEecchhhheeeeeeeccceeE-EEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhh
Confidence 45666443333334444445555 99999999999999999888754211000 0
Q ss_pred ------------------------------Ce---EE------eCCCCCEeEEEEeeCCCEEEEeeC--CCcEEEEecCC
Q psy6446 56 ------------------------------PT---VY------RGHSSGIKHVQFFKNNTRLISCAE--DKTVRLWDVSA 94 (134)
Q Consensus 56 ------------------------------~~---~~------~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~ 94 (134)
.. .+ ......+.-++|++|..+++|-.. -+.+.+||++.
T Consensus 272 l~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~ 351 (447)
T KOG4497|consen 272 LLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQN 351 (447)
T ss_pred hcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechh
Confidence 00 00 011235677999999999987654 35799999998
Q ss_pred CceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeC
Q psy6446 95 SAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 95 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~ 132 (134)
.+....+....+|....|+|....++.+ +..++.+|..
T Consensus 352 l~l~avLiQk~piraf~WdP~~prL~vctg~srLY~W~p 390 (447)
T KOG4497|consen 352 LKLHAVLIQKHPIRAFEWDPGRPRLVVCTGKSRLYFWAP 390 (447)
T ss_pred hhhhhhhhhccceeEEEeCCCCceEEEEcCCceEEEEcC
Confidence 8887777778899999999998766654 5678888864
No 257
>KOG2695|consensus
Probab=99.09 E-value=1.6e-09 Score=66.16 Aligned_cols=114 Identities=15% Similarity=0.188 Sum_probs=82.2
Q ss_pred eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCC----CCCCeEEeCCCCCEeEEEEee-CCCEEEEeeCCCcEEEEec
Q psy6446 18 HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKP----DAEPTVYRGHSSGIKHVQFFK-NNTRLISCAEDKTVRLWDV 92 (134)
Q Consensus 18 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~----~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~ 92 (134)
....++. +.|...++.++.|.++|.|..+|++.. .... ...-|...|++++.-. ++++|++.+.+|.|.+||+
T Consensus 251 sksDVfA-lQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a-~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~ 328 (425)
T KOG2695|consen 251 SKSDVFA-LQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCA-QRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDL 328 (425)
T ss_pred cchhHHH-HHhcccCCeeEecccCCcEEEEEeeecccCCCcce-EEEEcCcchhhhhhhccccceEeeccCcCceeEeee
Confidence 3444554 888888999999999999999999875 2222 2345889999999877 8899999999999999999
Q ss_pred CCCce---eEEEe-cC--CCCeEEEEccCCcEEEE-ecCCeEEEEeCC
Q psy6446 93 SASAE---VQKLE-FG--AVPNSLEISRDGTTITV-THGSCVTFLDAN 133 (134)
Q Consensus 93 ~~~~~---~~~~~-~~--~~v~~~~~~~~~~~l~~-~~~~~i~i~d~~ 133 (134)
+.-++ +.... |- ..-.-+-..+....+++ |.|.-.+||.++
T Consensus 329 R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~ 376 (425)
T KOG2695|consen 329 RATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLD 376 (425)
T ss_pred hhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecc
Confidence 97766 44443 21 11122333455555555 567899999876
No 258
>KOG0280|consensus
Probab=99.09 E-value=5.1e-09 Score=62.68 Aligned_cols=109 Identities=13% Similarity=0.149 Sum_probs=82.5
Q ss_pred EEEccCCcEEEEecCCCeEEEEECCCCC-CCCeEEeCCCCCEeEEEEee-CCCEEEEeeCCCcEEEEecCCC-ceeEE--
Q psy6446 26 VHFATDSYRLATGSNDKNIRIYDLNKPD-AEPTVYRGHSSGIKHVQFFK-NNTRLISCAEDKTVRLWDVSAS-AEVQK-- 100 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~d~~v~i~~~~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~-~~~~~-- 100 (134)
+.|++.+..++++..+|.+.+-+..... +..+..++|.-+.....|+. +.+.+.+|+.|+.+..||++-. +.+..
T Consensus 127 lD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~ 206 (339)
T KOG0280|consen 127 LDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNS 206 (339)
T ss_pred EEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecc
Confidence 8899989999999999998865544322 22236788999999999987 4567889999999999999933 33322
Q ss_pred EecCCCCeEEEEccC-CcEEEEe-cCCeEEEEeCCC
Q psy6446 101 LEFGAVPNSLEISRD-GTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 101 ~~~~~~v~~~~~~~~-~~~l~~~-~~~~i~i~d~~t 134 (134)
..|...|.++.-+|. +.++++| .|..|++||.++
T Consensus 207 kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRn 242 (339)
T KOG0280|consen 207 KVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRN 242 (339)
T ss_pred eeeecceEEEecCCCCCceEEEeccccceeeeehhc
Confidence 225678888887765 5678877 689999999873
No 259
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=99.08 E-value=1e-08 Score=66.34 Aligned_cols=88 Identities=13% Similarity=0.218 Sum_probs=67.1
Q ss_pred eEeecCCCce--e--eEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 3 TVWDAVSGEE--L--HSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 3 ~v~d~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
.+|+....+. + ..+..+..+.+ ++++|+...++.|+.||.|.+||...+.. ......-.++.++|+|+|..+
T Consensus 239 ciYE~~r~klqrvsvtsipL~s~v~~-ca~sp~E~kLvlGC~DgSiiLyD~~~~~t---~~~ka~~~P~~iaWHp~gai~ 314 (545)
T PF11768_consen 239 CIYECSRNKLQRVSVTSIPLPSQVIC-CARSPSEDKLVLGCEDGSIILYDTTRGVT---LLAKAEFIPTLIAWHPDGAIF 314 (545)
T ss_pred EEEEeecCceeEEEEEEEecCCcceE-EecCcccceEEEEecCCeEEEEEcCCCee---eeeeecccceEEEEcCCCcEE
Confidence 4667654442 2 22234455555 99999999999999999999999876432 223344668999999999999
Q ss_pred EEeeCCCcEEEEecCC
Q psy6446 79 ISCAEDKTVRLWDVSA 94 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~ 94 (134)
+.|+..|.+.+||+.-
T Consensus 315 ~V~s~qGelQ~FD~AL 330 (545)
T PF11768_consen 315 VVGSEQGELQCFDMAL 330 (545)
T ss_pred EEEcCCceEEEEEeec
Confidence 9999999999999853
No 260
>KOG1409|consensus
Probab=99.07 E-value=4.1e-09 Score=64.33 Aligned_cols=86 Identities=16% Similarity=0.420 Sum_probs=72.6
Q ss_pred CCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEE
Q psy6446 9 SGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVR 88 (134)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 88 (134)
.-.++.++.++...+.++.|.+....|++|..|..+.+||+.........+.+|...|..+...+.-+.+.+++.||.|.
T Consensus 186 ~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~ 265 (404)
T KOG1409|consen 186 GCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIV 265 (404)
T ss_pred CCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEE
Confidence 34456666755666666999999999999999999999999876666667789999999999988889999999999999
Q ss_pred EEecCC
Q psy6446 89 LWDVSA 94 (134)
Q Consensus 89 ~~d~~~ 94 (134)
+||...
T Consensus 266 ~w~mn~ 271 (404)
T KOG1409|consen 266 VWNMNV 271 (404)
T ss_pred EEeccc
Confidence 999764
No 261
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.07 E-value=5.7e-08 Score=62.55 Aligned_cols=111 Identities=13% Similarity=0.131 Sum_probs=72.4
Q ss_pred CCceeeEEEccCCcE-EEEecC---CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE-eeCC--CcEEEEec
Q psy6446 20 HIVKSSVHFATDSYR-LATGSN---DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS-CAED--KTVRLWDV 92 (134)
Q Consensus 20 ~~~~~~~~~~~~~~~-l~~~~~---d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d--~~i~~~d~ 92 (134)
..... ..|+|+|+. ++..+. +..|+++|+.++... .+....+......|+||++.++. .+.+ ..|.++|+
T Consensus 188 ~~~~~-p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~--~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl 264 (419)
T PRK04043 188 GLNIF-PKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKE--KIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDT 264 (419)
T ss_pred CCeEe-EEECCCCCcEEEEEEccCCCCEEEEEECCCCcEE--EEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEEC
Confidence 33444 999999985 554333 357888998775532 33345566677889999987764 3333 46888888
Q ss_pred CCCceeEEEecCCCCeEEEEccCCcEEEEecC----CeEEEEeCC
Q psy6446 93 SASAEVQKLEFGAVPNSLEISRDGTTITVTHG----SCVTFLDAN 133 (134)
Q Consensus 93 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----~~i~i~d~~ 133 (134)
.+++...............|+|||+.++..++ ..|.++|+.
T Consensus 265 ~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~ 309 (419)
T PRK04043 265 NTKTLTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLN 309 (419)
T ss_pred CCCcEEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECC
Confidence 77764443333333456789999987775432 277777764
No 262
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.07 E-value=7.6e-08 Score=68.17 Aligned_cols=109 Identities=17% Similarity=0.227 Sum_probs=76.7
Q ss_pred EEEccCCcEE-EEecCCCeEEEEECCCCCCCCeE------------Ee--------CCCCCEeEEEEeeCCCEEEEeeCC
Q psy6446 26 VHFATDSYRL-ATGSNDKNIRIYDLNKPDAEPTV------------YR--------GHSSGIKHVQFFKNNTRLISCAED 84 (134)
Q Consensus 26 ~~~~~~~~~l-~~~~~d~~v~i~~~~~~~~~~~~------------~~--------~~~~~v~~~~~~~~~~~l~~~~~d 84 (134)
++++|+++.| ++-+.++.|++||+.++...... +- ..-.....++++++++.+++-..+
T Consensus 745 IavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N 824 (1057)
T PLN02919 745 ISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYN 824 (1057)
T ss_pred EEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCC
Confidence 8899998855 45566789999998764321000 00 001134688999999988888889
Q ss_pred CcEEEEecCCCceeEEEecC--------------CCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 85 KTVRLWDVSASAEVQKLEFG--------------AVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 85 ~~i~~~d~~~~~~~~~~~~~--------------~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
+.|++||..++......... .....++++++|+.+++. .++.|++||+++
T Consensus 825 ~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~ 889 (1057)
T PLN02919 825 HKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNK 889 (1057)
T ss_pred CEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCC
Confidence 99999999876654332211 246789999999877765 679999999864
No 263
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.06 E-value=1.2e-07 Score=59.38 Aligned_cols=103 Identities=15% Similarity=0.078 Sum_probs=77.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecC----------CCeEEEEECCCCCCCCeEEeCC------CC
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSN----------DKNIRIYDLNKPDAEPTVYRGH------SS 64 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------d~~v~i~~~~~~~~~~~~~~~~------~~ 64 (134)
+|.+.|..+++.+.++........ + ++||++.|+++.. +..|.+||..+.+.......+. ..
T Consensus 28 ~v~ViD~~~~~v~g~i~~G~~P~~-~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~ 105 (352)
T TIGR02658 28 QVYTIDGEAGRVLGMTDGGFLPNP-V-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGT 105 (352)
T ss_pred eEEEEECCCCEEEEEEEccCCCce-e-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccC
Confidence 478999999999999985445544 5 9999999887755 6799999999866443222111 12
Q ss_pred CEeEEEEeeCCCEEEEeeC--CCcEEEEecCCCceeEEEecCC
Q psy6446 65 GIKHVQFFKNNTRLISCAE--DKTVRLWDVSASAEVQKLEFGA 105 (134)
Q Consensus 65 ~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~ 105 (134)
....++++|||++++.... +..+.+.|+.+++.+..+..+.
T Consensus 106 ~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~ 148 (352)
T TIGR02658 106 YPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPD 148 (352)
T ss_pred ccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCC
Confidence 3347899999999987663 6889999999999998887544
No 264
>KOG2041|consensus
Probab=99.03 E-value=3.1e-09 Score=70.72 Aligned_cols=110 Identities=17% Similarity=0.292 Sum_probs=87.3
Q ss_pred CCceeeEEEccCCcEEEEecCCCeEEEEECCCCCC--------------CCeEEeCCCCCEeEEEEeeCCCEEEEeeCCC
Q psy6446 20 HIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDA--------------EPTVYRGHSSGIKHVQFFKNNTRLISCAEDK 85 (134)
Q Consensus 20 ~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~--------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 85 (134)
+....|+.|+.+..++++|+.||.+++..+.+... ..+.+.+|...|.-+.|+.+.+.|-++..+|
T Consensus 14 nvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~G 93 (1189)
T KOG2041|consen 14 NVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSG 93 (1189)
T ss_pred CceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCc
Confidence 44567899999999999999999999998865321 1235679999999999999999999999999
Q ss_pred cEEEEecCCCceeEEEe---cCCCCeEEEEccCCcEEEEe-cCCeEEE
Q psy6446 86 TVRLWDVSASAEVQKLE---FGAVPNSLEISRDGTTITVT-HGSCVTF 129 (134)
Q Consensus 86 ~i~~~d~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~-~~~~i~i 129 (134)
.|.+|-+-.+.....+. ..+-|.+++|..+|..+++. .||.|.+
T Consensus 94 lIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIV 141 (1189)
T KOG2041|consen 94 LIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIV 141 (1189)
T ss_pred eEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEE
Confidence 99999887776544332 35678899999999877765 5666654
No 265
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.03 E-value=1e-07 Score=61.46 Aligned_cols=127 Identities=12% Similarity=0.125 Sum_probs=80.3
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEe-cCC--CeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATG-SND--KNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d--~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
|.++|+.+++............ ...|+|||+.++.. +.+ ..+.++++.++.. ..+..+........|+|||+.+
T Consensus 215 Iyv~dl~tg~~~~lt~~~g~~~-~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~--~~LT~~~~~d~~p~~SPDG~~I 291 (419)
T PRK04043 215 LYKYNLYTGKKEKIASSQGMLV-VSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTL--TQITNYPGIDVNGNFVEDDKRI 291 (419)
T ss_pred EEEEECCCCcEEEEecCCCcEE-eeEECCCCCEEEEEEccCCCcEEEEEECCCCcE--EEcccCCCccCccEECCCCCEE
Confidence 6788988887665554333333 48899999877643 333 5677888776542 2233333334566899999988
Q ss_pred EEeeC-CC--cEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-c-C--------CeEEEEeCC
Q psy6446 79 ISCAE-DK--TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-H-G--------SCVTFLDAN 133 (134)
Q Consensus 79 ~~~~~-d~--~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-~--------~~i~i~d~~ 133 (134)
+-.+. .+ .|.+.|+.+++..+....... ...|+|+|+.++.. . . ..|.+.|+.
T Consensus 292 ~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g~~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~ 357 (419)
T PRK04043 292 VFVSDRLGYPNIFMKKLNSGSVEQVVFHGKN--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTN 357 (419)
T ss_pred EEEECCCCCceEEEEECCCCCeEeCccCCCc--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECC
Confidence 75543 33 577888877766443322222 24899999988753 2 1 367777764
No 266
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.02 E-value=1.2e-07 Score=59.69 Aligned_cols=130 Identities=16% Similarity=0.249 Sum_probs=82.3
Q ss_pred eeEeecCCCc--ee--eEEe--eCCCceeeEEEccCCcEEEEe-cCCCeEEEEECCCCCCCCe---EEe----CC--CCC
Q psy6446 2 GTVWDAVSGE--EL--HSFQ--HPHIVKSSVHFATDSYRLATG-SNDKNIRIYDLNKPDAEPT---VYR----GH--SSG 65 (134)
Q Consensus 2 i~v~d~~~~~--~~--~~~~--~~~~~~~~~~~~~~~~~l~~~-~~d~~v~i~~~~~~~~~~~---~~~----~~--~~~ 65 (134)
|.+|++.... .. ..+. ....... +.|+|+++++++. -.++.|.++++........ ... +. ...
T Consensus 168 v~~~~~~~~~~~l~~~~~~~~~~G~GPRh-~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 246 (345)
T PF10282_consen 168 VYVYDIDDDTGKLTPVDSIKVPPGSGPRH-LAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENA 246 (345)
T ss_dssp EEEEEE-TTS-TEEEEEEEECSTTSSEEE-EEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSS
T ss_pred EEEEEEeCCCceEEEeeccccccCCCCcE-EEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCC
Confidence 6677776544 32 2233 3344556 9999999988655 4578899999883221111 111 11 125
Q ss_pred EeEEEEeeCCCEEEEee-CCCcEEEEecC--CCce--eEEEec-CCCCeEEEEccCCcEEEEe--cCCeEEEEeC
Q psy6446 66 IKHVQFFKNNTRLISCA-EDKTVRLWDVS--ASAE--VQKLEF-GAVPNSLEISRDGTTITVT--HGSCVTFLDA 132 (134)
Q Consensus 66 v~~~~~~~~~~~l~~~~-~d~~i~~~d~~--~~~~--~~~~~~-~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~ 132 (134)
...+.++||+++|+.+. ..+.|.+|++. +++. +..... ....+.+.++|+|++|+++ .++.|.+|++
T Consensus 247 ~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~ 321 (345)
T PF10282_consen 247 PAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDI 321 (345)
T ss_dssp EEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEE
T ss_pred ceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEE
Confidence 78999999999987665 45689999983 2332 333333 4457999999999998876 4589999876
No 267
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.02 E-value=1.5e-07 Score=60.20 Aligned_cols=113 Identities=12% Similarity=0.134 Sum_probs=89.0
Q ss_pred eCCCceeeEEEccCCcEEEEecCCC-eEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCc
Q psy6446 18 HPHIVKSSVHFATDSYRLATGSNDK-NIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASA 96 (134)
Q Consensus 18 ~~~~~~~~~~~~~~~~~l~~~~~d~-~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 96 (134)
+...+.- ..+..+++.++.|..|| .+-++|.+++.. ..+...-+.|.++..+++|++++.+.....+.+.|+.+++
T Consensus 358 ~~~~VrY-~r~~~~~e~~vigt~dgD~l~iyd~~~~e~--kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngn 434 (668)
T COG4946 358 KKGGVRY-RRIQVDPEGDVIGTNDGDKLGIYDKDGGEV--KRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGN 434 (668)
T ss_pred CCCceEE-EEEccCCcceEEeccCCceEEEEecCCceE--EEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCC
Confidence 3444333 56666777889999999 899999988652 3345566889999999999999999999999999999988
Q ss_pred eeEEEe-cCCCCeEEEEccCCcEEEEe-c----CCeEEEEeCC
Q psy6446 97 EVQKLE-FGAVPNSLEISRDGTTITVT-H----GSCVTFLDAN 133 (134)
Q Consensus 97 ~~~~~~-~~~~v~~~~~~~~~~~l~~~-~----~~~i~i~d~~ 133 (134)
....-+ ...-|....|+|++++++-+ - ...|++||+.
T Consensus 435 v~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~ 477 (668)
T COG4946 435 VRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMD 477 (668)
T ss_pred eeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecC
Confidence 765443 35678999999999999976 2 2589999875
No 268
>KOG1240|consensus
Probab=99.01 E-value=1.5e-08 Score=70.66 Aligned_cols=132 Identities=13% Similarity=0.126 Sum_probs=90.5
Q ss_pred eeEeecCCCceeeEEe--eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCC---C
Q psy6446 2 GTVWDAVSGEELHSFQ--HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNN---T 76 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~ 76 (134)
|..||+......+.++ ...+.+++++.+|.+++++.|...|.+.+||++-..........+..++..+..+|-. .
T Consensus 1175 iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S 1254 (1431)
T KOG1240|consen 1175 IVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQES 1254 (1431)
T ss_pred eEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCc
Confidence 5678988777776665 3445566699999999999999999999999997665544444566788888887733 3
Q ss_pred EEEEee--CCCcEEEEecCCCceeEEEecCCC--------------------CeEEEEccCCcEEEE-ecCCeEEEEeCC
Q psy6446 77 RLISCA--EDKTVRLWDVSASAEVQKLEFGAV--------------------PNSLEISRDGTTITV-THGSCVTFLDAN 133 (134)
Q Consensus 77 ~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~--------------------v~~~~~~~~~~~l~~-~~~~~i~i~d~~ 133 (134)
..++++ ..+.+.+|++.+|.+...+-.... .....+...+.++.+ +.|..|+.||..
T Consensus 1255 ~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~ 1334 (1431)
T KOG1240|consen 1255 VSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPT 1334 (1431)
T ss_pred eEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCC
Confidence 444443 567899999999876665542211 011122222344454 578999999974
No 269
>KOG1064|consensus
Probab=98.98 E-value=8.2e-09 Score=74.35 Aligned_cols=129 Identities=12% Similarity=0.230 Sum_probs=99.0
Q ss_pred CeeEeecCCCceeeEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+|++|.+..++.+..++ ....-++.+.|+.+|+.+..+..||.+.+|.... .+....+.|........|-. ..++
T Consensus 2231 sv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~p--k~~~s~qchnk~~~Df~Fi~--s~~~ 2306 (2439)
T KOG1064|consen 2231 SVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQASP--KPYTSWQCHNKALSDFRFIG--SLLA 2306 (2439)
T ss_pred eEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccCC--cceeccccCCccccceeeee--hhhh
Confidence 47899999899888887 2224555599999999999999999999999873 34445677888888888864 5566
Q ss_pred EeeC---CCcEEEEecCCCc--eeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 80 SCAE---DKTVRLWDVSASA--EVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 80 ~~~~---d~~i~~~d~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+++. ++.+.+||..-.. ..-...|.+..+++++.|..+.+++| .+|.|.+||++
T Consensus 2307 tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~r 2366 (2439)
T KOG1064|consen 2307 TAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIR 2366 (2439)
T ss_pred ccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehH
Confidence 5543 5679999975322 22223478889999999999888876 57999999985
No 270
>KOG2314|consensus
Probab=98.90 E-value=3.8e-08 Score=63.70 Aligned_cols=108 Identities=14% Similarity=0.277 Sum_probs=81.7
Q ss_pred ceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCC-----------CcEEEE
Q psy6446 22 VKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAED-----------KTVRLW 90 (134)
Q Consensus 22 ~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------~~i~~~ 90 (134)
.-+.+.|||.|.+|++-...| |.+|-=..-....+. .| ..|.-+.|||..++|+|-+.. ..+.||
T Consensus 212 Tetyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF--~H-p~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IW 287 (698)
T KOG2314|consen 212 TETYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRF--YH-PGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIW 287 (698)
T ss_pred eeeeEEecCCceEEEEEeccc-eeeecCccHHHHHhc--cC-CCceeeecCCccceEEEecCCccccCcccCCCceEEEE
Confidence 344599999999999988766 778865443333332 24 468999999999999986531 368999
Q ss_pred ecCCCceeEEEec---CCCC-eEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 91 DVSASAEVQKLEF---GAVP-NSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 91 d~~~~~~~~~~~~---~~~v-~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
|+.+|...+.+.. +..+ .-..||.|+++++.-....|.||+..
T Consensus 288 DI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~sisIyEtp 334 (698)
T KOG2314|consen 288 DIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGNSISIYETP 334 (698)
T ss_pred EccccchhcceeccCCCccccceEEeccCCceeEEeccceEEEEecC
Confidence 9999999888875 2222 45689999999998777889998764
No 271
>KOG1354|consensus
Probab=98.89 E-value=6.1e-08 Score=59.50 Aligned_cols=116 Identities=18% Similarity=0.332 Sum_probs=83.8
Q ss_pred eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCC----CCeEEeCCC------------CCEeEEEEeeCC--CEEE
Q psy6446 18 HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDA----EPTVYRGHS------------SGIKHVQFFKNN--TRLI 79 (134)
Q Consensus 18 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~----~~~~~~~~~------------~~v~~~~~~~~~--~~l~ 79 (134)
....+++++.|...|.+|++|..+|.|-++.-..... ....+..|. ..|..+.|.+++ ..++
T Consensus 23 teadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FL 102 (433)
T KOG1354|consen 23 TEADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFL 102 (433)
T ss_pred chhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEE
Confidence 3456778899999999999999999999987544222 122333343 357889998754 4677
Q ss_pred EeeCCCcEEEEecCCCceeE-----------------------------------EEe--cCCCCeEEEEccCCcEEEEe
Q psy6446 80 SCAEDKTVRLWDVSASAEVQ-----------------------------------KLE--FGAVPNSLEISRDGTTITVT 122 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~-----------------------------------~~~--~~~~v~~~~~~~~~~~l~~~ 122 (134)
....|.+|++|.++...... .+. |..-+++++++.|+..++++
T Consensus 103 lstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA 182 (433)
T KOG1354|consen 103 LSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA 182 (433)
T ss_pred EecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec
Confidence 88999999999876422111 000 23457889999999999999
Q ss_pred cCCeEEEEeCC
Q psy6446 123 HGSCVTFLDAN 133 (134)
Q Consensus 123 ~~~~i~i~d~~ 133 (134)
.|=+|.+|+++
T Consensus 183 DdLRINLWnle 193 (433)
T KOG1354|consen 183 DDLRINLWNLE 193 (433)
T ss_pred cceeeeecccc
Confidence 89999999875
No 272
>KOG2315|consensus
Probab=98.88 E-value=3.7e-08 Score=63.45 Aligned_cols=106 Identities=9% Similarity=0.278 Sum_probs=70.7
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecC---CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSN---DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
+.|||++ +.++..+ .....+++.|+|.|++|+.++. .|.+-+||..+.+.+. .+.. ...+-..|+|||+++
T Consensus 296 vtifnlr-~~~v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~-~~~a--~~tt~~eW~PdGe~f 369 (566)
T KOG2315|consen 296 VTIFNLR-GKPVFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIA-KFKA--ANTTVFEWSPDGEYF 369 (566)
T ss_pred EEEEcCC-CCEeEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhcc-cccc--CCceEEEEcCCCcEE
Confidence 4567754 5555544 3344556999999999887654 4789999998855443 3332 345778999999999
Q ss_pred EEeeC------CCcEEEEecCCCceeEEEecCCCCeEEEEcc
Q psy6446 79 ISCAE------DKTVRLWDVSASAEVQKLEFGAVPNSLEISR 114 (134)
Q Consensus 79 ~~~~~------d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~ 114 (134)
+|+.- |+.++||++. |+.+......++...+.|-|
T Consensus 370 lTATTaPRlrvdNg~Kiwhyt-G~~l~~~~f~sEL~qv~W~P 410 (566)
T KOG2315|consen 370 LTATTAPRLRVDNGIKIWHYT-GSLLHEKMFKSELLQVEWRP 410 (566)
T ss_pred EEEeccccEEecCCeEEEEec-CceeehhhhhHhHhheeeee
Confidence 98754 6789999975 44433332333455566654
No 273
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.86 E-value=7.6e-07 Score=55.92 Aligned_cols=103 Identities=17% Similarity=0.257 Sum_probs=76.1
Q ss_pred CCcEEEEecCCCeEEEEECCCCCC----CCeEE-------eCCCCCEeEEEEeeCCCEEEEee----------CCCcEEE
Q psy6446 31 DSYRLATGSNDKNIRIYDLNKPDA----EPTVY-------RGHSSGIKHVQFFKNNTRLISCA----------EDKTVRL 89 (134)
Q Consensus 31 ~~~~l~~~~~d~~v~i~~~~~~~~----~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~~ 89 (134)
+++++.+... |.|.+.|+..... ....+ ....+...-++++|+++.++... ..+.|.+
T Consensus 205 dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~V 283 (352)
T TIGR02658 205 SGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFV 283 (352)
T ss_pred CCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEE
Confidence 7777777766 9999999644221 11111 11334556699999998887632 1257999
Q ss_pred EecCCCceeEEEecCCCCeEEEEccCCc-EEEEe--cCCeEEEEeCCC
Q psy6446 90 WDVSASAEVQKLEFGAVPNSLEISRDGT-TITVT--HGSCVTFLDANS 134 (134)
Q Consensus 90 ~d~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~--~~~~i~i~d~~t 134 (134)
+|..+++.+..+..+..+..++++||++ ++++. .++.|.++|+.+
T Consensus 284 iD~~t~kvi~~i~vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t 331 (352)
T TIGR02658 284 VDAKTGKRLRKIELGHEIDSINVSQDAKPLLYALSTGDKTLYIFDAET 331 (352)
T ss_pred EECCCCeEEEEEeCCCceeeEEECCCCCeEEEEeCCCCCcEEEEECcC
Confidence 9999999999999899999999999998 77654 468899999864
No 274
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.86 E-value=1.6e-07 Score=60.43 Aligned_cols=128 Identities=16% Similarity=0.138 Sum_probs=79.3
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEE-ecCCCe--EEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLAT-GSNDKN--IRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~d~~--v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
+.++|+.+++....+........ .+|+|||+.++. ...||. |+++|+.... . ..+..-.+.-..-.|+|||+++
T Consensus 220 i~~~~l~~g~~~~i~~~~g~~~~-P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~-~-~~Lt~~~gi~~~Ps~spdG~~i 296 (425)
T COG0823 220 IYYLDLNTGKRPVILNFNGNNGA-PAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN-L-PRLTNGFGINTSPSWSPDGSKI 296 (425)
T ss_pred EEEEeccCCccceeeccCCccCC-ccCCCCCCEEEEEECCCCCccEEEEcCCCCc-c-eecccCCccccCccCCCCCCEE
Confidence 56778887776665554434444 899999988765 455665 5566666544 2 2233334444578899999998
Q ss_pred EEee-CCC--cEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEec--CCe--EEEEeC
Q psy6446 79 ISCA-EDK--TVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH--GSC--VTFLDA 132 (134)
Q Consensus 79 ~~~~-~d~--~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~--i~i~d~ 132 (134)
+-.+ ..| .|.+.|.......+.......-....|+|||++++... +|. |.+.|+
T Consensus 297 vf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~ 357 (425)
T COG0823 297 VFTSDRGGRPQIYLYDLEGSQVTRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDL 357 (425)
T ss_pred EEEeCCCCCcceEEECCCCCceeEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEecc
Confidence 7544 444 46667766655533333333333788999999888643 454 555544
No 275
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.85 E-value=2.5e-06 Score=52.67 Aligned_cols=130 Identities=8% Similarity=0.150 Sum_probs=86.8
Q ss_pred eeEeecCCCceee----EEeeCCCceeeEEEccCCcEEEEec-CCCeEEEEECCCCCCCCeEEeC---------CCCCEe
Q psy6446 2 GTVWDAVSGEELH----SFQHPHIVKSSVHFATDSYRLATGS-NDKNIRIYDLNKPDAEPTVYRG---------HSSGIK 67 (134)
Q Consensus 2 i~v~d~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~v~i~~~~~~~~~~~~~~~---------~~~~v~ 67 (134)
|.+|++..|+... .++....... +.|+|++++..+.. .+++|-+|..+........+.. -.....
T Consensus 169 i~~y~~~dg~L~~~~~~~v~~G~GPRH-i~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~a 247 (346)
T COG2706 169 IFLYDLDDGKLTPADPAEVKPGAGPRH-IVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAA 247 (346)
T ss_pred EEEEEcccCccccccccccCCCCCcce-EEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCcee
Confidence 6788888776533 2334555667 99999999987655 5889999998874211111111 124567
Q ss_pred EEEEeeCCCEEEEeeC-CCcEEEEecCCC-ceeEEEe----cCCCCeEEEEccCCcEEEEe-c-CCeEEEEeC
Q psy6446 68 HVQFFKNNTRLISCAE-DKTVRLWDVSAS-AEVQKLE----FGAVPNSLEISRDGTTITVT-H-GSCVTFLDA 132 (134)
Q Consensus 68 ~~~~~~~~~~l~~~~~-d~~i~~~d~~~~-~~~~~~~----~~~~v~~~~~~~~~~~l~~~-~-~~~i~i~d~ 132 (134)
.+..++||++|.++.+ ...|.+|.+... ..+.... +....+...+++.+++|++. . +..|.+|..
T Consensus 248 aIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~ 320 (346)
T COG2706 248 AIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFER 320 (346)
T ss_pred EEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEE
Confidence 8889999999988765 346888877543 2222222 23447899999999998876 3 367888764
No 276
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.84 E-value=2.2e-06 Score=54.09 Aligned_cols=131 Identities=14% Similarity=0.139 Sum_probs=85.7
Q ss_pred eeEeec--CCCcee--eEEeeCCCceeeEEEccCCcEEEEecC----CCeEEEEECCCCC-CC--CeEEeCCCCCEeEEE
Q psy6446 2 GTVWDA--VSGEEL--HSFQHPHIVKSSVHFATDSYRLATGSN----DKNIRIYDLNKPD-AE--PTVYRGHSSGIKHVQ 70 (134)
Q Consensus 2 i~v~d~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~----d~~v~i~~~~~~~-~~--~~~~~~~~~~v~~~~ 70 (134)
|++|++ .+++.. ..+........ ++++|++++|.+... ++.|..|.+.... .+ ...........+.++
T Consensus 15 I~~~~~d~~~g~l~~~~~~~~~~~Ps~-l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~ 93 (345)
T PF10282_consen 15 IYVFRFDEETGTLTLVQTVAEGENPSW-LAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIA 93 (345)
T ss_dssp EEEEEEETTTTEEEEEEEEEESSSECC-EEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEE
T ss_pred EEEEEEcCCCCCceEeeeecCCCCCce-EEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEE
Confidence 445555 555543 33334444455 999999999988866 5789988887641 11 112222445678999
Q ss_pred EeeCCCEEEEee-CCCcEEEEecCC-CceeEE---Eec-----------CCCCeEEEEccCCcEEEEe--cCCeEEEEeC
Q psy6446 71 FFKNNTRLISCA-EDKTVRLWDVSA-SAEVQK---LEF-----------GAVPNSLEISRDGTTITVT--HGSCVTFLDA 132 (134)
Q Consensus 71 ~~~~~~~l~~~~-~d~~i~~~d~~~-~~~~~~---~~~-----------~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~ 132 (134)
++|++++++++. .+|.+.++++.. +..... ..+ .....++.++|+++++++. +...|.+|++
T Consensus 94 ~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~ 173 (345)
T PF10282_consen 94 VDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDI 173 (345)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE
T ss_pred EecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEE
Confidence 999999988776 588999999986 333222 211 2335789999999988875 4578999987
Q ss_pred C
Q psy6446 133 N 133 (134)
Q Consensus 133 ~ 133 (134)
.
T Consensus 174 ~ 174 (345)
T PF10282_consen 174 D 174 (345)
T ss_dssp -
T ss_pred e
Confidence 4
No 277
>KOG1275|consensus
Probab=98.84 E-value=2.7e-07 Score=63.05 Aligned_cols=124 Identities=17% Similarity=0.254 Sum_probs=88.7
Q ss_pred eEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEee
Q psy6446 3 TVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCA 82 (134)
Q Consensus 3 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 82 (134)
-.+|+.+.+..+...-....+ .....+++.+++|...|+|.+-|.++-+ ....+..|.+.+.+++. .|+.|++++
T Consensus 160 i~~Dl~~~~e~r~~~v~a~~v--~imR~Nnr~lf~G~t~G~V~LrD~~s~~-~iht~~aHs~siSDfDv--~GNlLitCG 234 (1118)
T KOG1275|consen 160 IHIDLNTEKETRTTNVSASGV--TIMRYNNRNLFCGDTRGTVFLRDPNSFE-TIHTFDAHSGSISDFDV--QGNLLITCG 234 (1118)
T ss_pred eeeecccceeeeeeeccCCce--EEEEecCcEEEeecccceEEeecCCcCc-eeeeeeccccceeeeec--cCCeEEEee
Confidence 356777666666555333233 3334578999999999999999998854 45678999999988777 689999887
Q ss_pred C---------CCcEEEEecCCCceeEEE-----------------------------------------------ecCCC
Q psy6446 83 E---------DKTVRLWDVSASAEVQKL-----------------------------------------------EFGAV 106 (134)
Q Consensus 83 ~---------d~~i~~~d~~~~~~~~~~-----------------------------------------------~~~~~ 106 (134)
. |..+++||++.-+.+..+ +..+.
T Consensus 235 ~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~ 314 (1118)
T KOG1275|consen 235 YSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSG 314 (1118)
T ss_pred cccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCc
Confidence 5 456899998863321000 01224
Q ss_pred CeEEEEccCCcEEEEe-cCCeEEEEe
Q psy6446 107 PNSLEISRDGTTITVT-HGSCVTFLD 131 (134)
Q Consensus 107 v~~~~~~~~~~~l~~~-~~~~i~i~d 131 (134)
+..+.+++++..++.+ .+|.|.+|-
T Consensus 315 i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 315 ISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred ceeEEecCCCceEEEecccCcEeeec
Confidence 6788899999999988 579999995
No 278
>KOG1064|consensus
Probab=98.84 E-value=9.8e-09 Score=73.99 Aligned_cols=92 Identities=17% Similarity=0.244 Sum_probs=69.8
Q ss_pred cEEEEe---cCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeE
Q psy6446 33 YRLATG---SNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNS 109 (134)
Q Consensus 33 ~~l~~~---~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~ 109 (134)
..++++ +.++++.+||...........+.|.+.++++++.|..+.|++|+.+|.+++||++..+....++.
T Consensus 2303 s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~------ 2376 (2439)
T KOG1064|consen 2303 SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA------ 2376 (2439)
T ss_pred hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh------
Confidence 445554 34678999997654433334488999999999999999999999999999999998776654432
Q ss_pred EEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 110 LEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 110 ~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
++ ...+++.+ ..|.++||++.
T Consensus 2377 --~~-~~~~f~~~ss~g~ikIw~~s 2398 (2439)
T KOG1064|consen 2377 --LD-TREYFVTGSSEGNIKIWRLS 2398 (2439)
T ss_pred --hh-hhheeeccCcccceEEEEcc
Confidence 44 44566665 56999999875
No 279
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.82 E-value=4e-06 Score=51.44 Aligned_cols=80 Identities=20% Similarity=0.265 Sum_probs=56.2
Q ss_pred eeEeecCCCceeeEEee-CCCc-eeeEEEccCCcEEEEecC-----CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeC
Q psy6446 2 GTVWDAVSGEELHSFQH-PHIV-KSSVHFATDSYRLATGSN-----DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKN 74 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~l~~~~~-----d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 74 (134)
..+||..+++....+.. .+.- ..-..|++||++|++.-+ .|.|-|||....-.....+..+.-....+.+.||
T Consensus 30 ~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pD 109 (305)
T PF07433_consen 30 ALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPD 109 (305)
T ss_pred EEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCC
Confidence 46899999999888863 2222 223889999999998633 5789999998433333455666666677888888
Q ss_pred CCEEEEe
Q psy6446 75 NTRLISC 81 (134)
Q Consensus 75 ~~~l~~~ 81 (134)
++.|+.+
T Consensus 110 G~tLvVA 116 (305)
T PF07433_consen 110 GETLVVA 116 (305)
T ss_pred CCEEEEE
Confidence 8766643
No 280
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.80 E-value=1.8e-06 Score=53.23 Aligned_cols=131 Identities=15% Similarity=0.131 Sum_probs=86.3
Q ss_pred eeEeecCC--Cc--eeeEEeeCCCceeeEEEccCCcEEEEecCC---CeEEEEECCCCCCCCeEE---eCCCCCEeEEEE
Q psy6446 2 GTVWDAVS--GE--ELHSFQHPHIVKSSVHFATDSYRLATGSND---KNIRIYDLNKPDAEPTVY---RGHSSGIKHVQF 71 (134)
Q Consensus 2 i~v~d~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---~~v~i~~~~~~~~~~~~~---~~~~~~v~~~~~ 71 (134)
|++|++.+ |+ .+..+........ ++|+|+++.|.++..+ |.|.-|.++...-....+ .....+.+.+++
T Consensus 18 I~v~~ld~~~g~l~~~~~v~~~~npty-l~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsv 96 (346)
T COG2706 18 IYVFNLDTKTGELSLLQLVAELGNPTY-LAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSV 96 (346)
T ss_pred eEEEEEeCcccccchhhhccccCCCce-EEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEE
Confidence 67787762 22 2333445555556 9999999999887554 667777766421111111 122334489999
Q ss_pred eeCCCEEEEeeC-CCcEEEEecCC-Cce---eEEEecCCC----------CeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 72 FKNNTRLISCAE-DKTVRLWDVSA-SAE---VQKLEFGAV----------PNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 72 ~~~~~~l~~~~~-d~~i~~~d~~~-~~~---~~~~~~~~~----------v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
++++++++++.. -|.|.++.++. |.. .....+... +....+.|+++++++. +..+|.+|++.
T Consensus 97 d~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~ 175 (346)
T COG2706 97 DEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLD 175 (346)
T ss_pred CCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcc
Confidence 999999987765 57899999865 332 233334333 7788999999998876 45789999874
No 281
>KOG1354|consensus
Probab=98.78 E-value=1.3e-07 Score=58.07 Aligned_cols=114 Identities=18% Similarity=0.213 Sum_probs=80.5
Q ss_pred CCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEe--CC-----CCCEeEEEEee-CCCEEEEeeCCCcEEEE
Q psy6446 19 PHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYR--GH-----SSGIKHVQFFK-NNTRLISCAEDKTVRLW 90 (134)
Q Consensus 19 ~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~--~~-----~~~v~~~~~~~-~~~~l~~~~~d~~i~~~ 90 (134)
+...++++.++.|+..++++ .|=.|.+|++.-......... .+ ..-|++..|+| ..+.++..+..|+|++.
T Consensus 163 HtyhiNSIS~NsD~Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLc 241 (433)
T KOG1354|consen 163 HTYHINSISVNSDKETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLC 241 (433)
T ss_pred ceeEeeeeeecCccceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEe
Confidence 44556669999988887776 567899999875443222221 11 23578899999 56788888999999999
Q ss_pred ecCCCce----eEEEe--c-----------CCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 91 DVSASAE----VQKLE--F-----------GAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 91 d~~~~~~----~~~~~--~-----------~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
|++.... ...+. . -..|..++|+++|+++++-.=-+|++||+.
T Consensus 242 DmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDyltvk~wD~n 301 (433)
T KOG1354|consen 242 DMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDYLTVKLWDLN 301 (433)
T ss_pred echhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEeccceeEEEecc
Confidence 9985321 11111 0 135788999999999988655899999984
No 282
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=98.78 E-value=1.2e-06 Score=60.08 Aligned_cols=129 Identities=14% Similarity=0.161 Sum_probs=86.4
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccC-------CcEEEEecCCCeEEEEECCCCCCCCeEEe----CCCCCEeEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATD-------SYRLATGSNDKNIRIYDLNKPDAEPTVYR----GHSSGIKHVQ 70 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~~~d~~v~i~~~~~~~~~~~~~~----~~~~~v~~~~ 70 (134)
|+-.|+..|+.+...+.+.... ...+.|+ ....+.|-.++.+..||.+........-. ......++++
T Consensus 506 ly~mDLe~GKVV~eW~~~~~~~-v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~a 584 (794)
T PF08553_consen 506 LYKMDLERGKVVEEWKVHDDIP-VVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFA 584 (794)
T ss_pred eEEEecCCCcEEEEeecCCCcc-eeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCceEEE
Confidence 5678999999998888433331 1334442 34467777788899999987432111101 1233456666
Q ss_pred EeeCCCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEecCCeEEEEeC
Q psy6446 71 FFKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 71 ~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~ 132 (134)
-+.+ -+++.|+.+|.|++||-...+....++ .+.+|.++..+.||++++++.+.-|.++++
T Consensus 585 Tt~~-G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~tyLlLi~t 646 (794)
T PF08553_consen 585 TTED-GYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCKTYLLLIDT 646 (794)
T ss_pred ecCC-ceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeecceEEEEEE
Confidence 5544 478999999999999943322222333 378999999999999999988887877775
No 283
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.76 E-value=3.1e-06 Score=56.49 Aligned_cols=130 Identities=18% Similarity=0.087 Sum_probs=88.1
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEec----------------------------------------CC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGS----------------------------------------ND 41 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------------------------------------~d 41 (134)
+.+.|..+.+...++.-....-. +.++|+|+++++.+ .+
T Consensus 217 vSvID~etmeV~~qV~Vdgnpd~-v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vkdGK~~~V~g 295 (635)
T PRK02888 217 FTAVDAETMEVAWQVMVDGNLDN-VDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVKAGKFKTIGG 295 (635)
T ss_pred EEEEECccceEEEEEEeCCCccc-ceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhhCCCEEEECC
Confidence 45667777777777775445555 77888888877765 12
Q ss_pred CeEEEEECCC----CCCCCeEEeCCCCCEeEEEEeeCCCEEEEee-CCCcEEEEecCCCce------------eEEEecC
Q psy6446 42 KNIRIYDLNK----PDAEPTVYRGHSSGIKHVQFFKNNTRLISCA-EDKTVRLWDVSASAE------------VQKLEFG 104 (134)
Q Consensus 42 ~~v~i~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~------------~~~~~~~ 104 (134)
+.|.+.|..+ +.... .+-.-......+.++|||++++..+ .++++.+.|+.+.+. .......
T Consensus 296 n~V~VID~~t~~~~~~~v~-~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevG 374 (635)
T PRK02888 296 SKVPVVDGRKAANAGSALT-RYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELG 374 (635)
T ss_pred CEEEEEECCccccCCcceE-EEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccC
Confidence 4467777665 22221 2223445678899999999987655 488999999987553 3333345
Q ss_pred CCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 105 AVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 105 ~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
......+|+++|....+- -|.+|..||+.
T Consensus 375 lGPLHTaFDg~G~aytslf~dsqv~kwn~~ 404 (635)
T PRK02888 375 LGPLHTAFDGRGNAYTTLFLDSQIVKWNIE 404 (635)
T ss_pred CCcceEEECCCCCEEEeEeecceeEEEehH
Confidence 556788999998754443 68899999975
No 284
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.76 E-value=2.2e-06 Score=51.09 Aligned_cols=131 Identities=17% Similarity=0.150 Sum_probs=81.6
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeE-EEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSV-HFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+|..+|..+|+.+.........-..+ ...+++..+++++.++.+..+|..+++.... ... .+.+.... ..++..++
T Consensus 4 ~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~-~~~-~~~~~~~~-~~~~~~v~ 80 (238)
T PF13360_consen 4 TLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWR-FDL-PGPISGAP-VVDGGRVY 80 (238)
T ss_dssp EEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEE-EEC-SSCGGSGE-EEETTEEE
T ss_pred EEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEE-eec-ccccccee-eecccccc
Confidence 47889999999999987422121111 1333567788878999999999988764332 222 22222212 23566667
Q ss_pred EeeCCCcEEEEecCCCceeEEE-ecCCC----CeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKL-EFGAV----PNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~-~~~~~----v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
.+..++.+..+|..+++..... ....+ .........+..++++ .++.|..+|+++
T Consensus 81 v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t 141 (238)
T PF13360_consen 81 VGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKT 141 (238)
T ss_dssp EEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTT
T ss_pred cccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCC
Confidence 7778889999999999998884 32211 1222223335555554 589999998764
No 285
>KOG3621|consensus
Probab=98.74 E-value=1.4e-07 Score=62.53 Aligned_cols=107 Identities=11% Similarity=0.080 Sum_probs=81.1
Q ss_pred EEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe---
Q psy6446 26 VHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE--- 102 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~--- 102 (134)
-+++..+++++.|+..|.+++|+-..+........+..+.+.....+++..+++.++..|.|.++.+..+.+.....
T Consensus 39 Tc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~ 118 (726)
T KOG3621|consen 39 TCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTP 118 (726)
T ss_pred EEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeecc
Confidence 44566789999999999999999877654443344455677778888888888999999999999887643322111
Q ss_pred ----cCCCCeEEEEccCCcEEEEec-CCeEEEEeC
Q psy6446 103 ----FGAVPNSLEISRDGTTITVTH-GSCVTFLDA 132 (134)
Q Consensus 103 ----~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~ 132 (134)
++..|++++|++++..+..|. .|+|..-.+
T Consensus 119 ~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L 153 (726)
T KOG3621|consen 119 CDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTEL 153 (726)
T ss_pred ccccCCceEEEEEecccccEEeecCCCceEEEEEe
Confidence 466799999999999999985 488776543
No 286
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.73 E-value=3.1e-06 Score=50.87 Aligned_cols=111 Identities=14% Similarity=0.240 Sum_probs=73.6
Q ss_pred eeeEEEccCCcEEEEecCCCeEEEEECCCCCC----------------------------------CC--------e---
Q psy6446 23 KSSVHFATDSYRLATGSNDKNIRIYDLNKPDA----------------------------------EP--------T--- 57 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~----------------------------------~~--------~--- 57 (134)
-..++|+||+..|+.+...|.|+++|+..... +. +
T Consensus 46 WRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~ 125 (282)
T PF15492_consen 46 WRKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYL 125 (282)
T ss_pred heEEEECCCCcEEEEEcCCCeEEEEecccceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEE
Confidence 34499999999999999999999999852100 00 0
Q ss_pred ---------------EE-eCCCCCEeEEEEeeCCCEEEEeeCC-C----------cEEEEecCCCceeEE----------
Q psy6446 58 ---------------VY-RGHSSGIKHVQFFKNNTRLISCAED-K----------TVRLWDVSASAEVQK---------- 100 (134)
Q Consensus 58 ---------------~~-~~~~~~v~~~~~~~~~~~l~~~~~d-~----------~i~~~d~~~~~~~~~---------- 100 (134)
.+ ..+...|.++.++|..+.|+.++.. . -+.-|.+-++.+...
T Consensus 126 vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~ 205 (282)
T PF15492_consen 126 VSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDIT 205 (282)
T ss_pred EEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCcccc
Confidence 00 0124578888999887877765532 1 255665433221100
Q ss_pred ----------Ee----------cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 101 ----------LE----------FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 101 ----------~~----------~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
+. ....|..|+.+|||..|++. .+|.|.+|++.
T Consensus 206 ~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iP 259 (282)
T PF15492_consen 206 ASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIP 259 (282)
T ss_pred ccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecC
Confidence 00 13467899999999999976 68999999975
No 287
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.72 E-value=1.5e-06 Score=61.07 Aligned_cols=129 Identities=12% Similarity=0.165 Sum_probs=83.4
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecC---CCeEEEEECCCCCCCCeEEe--CCCCCEeEEEEeeCCC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSN---DKNIRIYDLNKPDAEPTVYR--GHSSGIKHVQFFKNNT 76 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---d~~v~i~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~ 76 (134)
++||+- .|+....-+.-.+.-.+++|.|.|++|++... ...|.+|.-+....-...++ .....|..+.|++++.
T Consensus 239 iRVy~R-eG~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~ 317 (928)
T PF04762_consen 239 IRVYSR-EGELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIELAWNSDSE 317 (928)
T ss_pred EEEECC-CceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEEEECCCCC
Confidence 788984 47766666544444556999999999998765 34566666443221111122 3456799999999999
Q ss_pred EEEEeeCCCcEEEEecCCCceeE--EEe--cCCCCeEEEEccCCc-EEE-EecCCeEEEEeC
Q psy6446 77 RLISCAEDKTVRLWDVSASAEVQ--KLE--FGAVPNSLEISRDGT-TIT-VTHGSCVTFLDA 132 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~~~--~~~--~~~~v~~~~~~~~~~-~l~-~~~~~~i~i~d~ 132 (134)
.|+....|. |.+|-..+-.... .+. ....+..+.|+|... .+. .+.+|.+..++.
T Consensus 318 iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~ 378 (928)
T PF04762_consen 318 ILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDF 378 (928)
T ss_pred EEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEE
Confidence 999877665 9999877655332 222 234456699999753 333 345576666553
No 288
>KOG4714|consensus
Probab=98.71 E-value=3.2e-08 Score=58.54 Aligned_cols=90 Identities=14% Similarity=0.104 Sum_probs=61.2
Q ss_pred eEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCC-EEEEeeCCCcEEEEecCCCceeEEEe--cCCCCeEEEEccCC--c
Q psy6446 43 NIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNT-RLISCAEDKTVRLWDVSASAEVQKLE--FGAVPNSLEISRDG--T 117 (134)
Q Consensus 43 ~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~--~~~~v~~~~~~~~~--~ 117 (134)
..+.|+++..+......+ ....|.+++-+|..+ .+++|+.||.+.+||.++......+. ++.++..+-|+|.. +
T Consensus 160 ~~~a~~~~p~~t~~~~~~-~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~ 238 (319)
T KOG4714|consen 160 NFYANTLDPIKTLIPSKK-ALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEH 238 (319)
T ss_pred ceeeeccccccccccccc-ccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchh
Confidence 445566654332221111 223489999999554 55678889999999998874333222 67899999999965 3
Q ss_pred EEEEecCCeEEEEeCC
Q psy6446 118 TITVTHGSCVTFLDAN 133 (134)
Q Consensus 118 ~l~~~~~~~i~i~d~~ 133 (134)
++.++.||.+..||..
T Consensus 239 Lft~sedGslw~wdas 254 (319)
T KOG4714|consen 239 LFTCSEDGSLWHWDAS 254 (319)
T ss_pred eeEecCCCcEEEEcCC
Confidence 5556689999999975
No 289
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.71 E-value=2.4e-06 Score=54.54 Aligned_cols=122 Identities=11% Similarity=-0.021 Sum_probs=78.6
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEe
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISC 81 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 81 (134)
++.+|..+|+.+...+.... .. .. ..+..++.++.+|.+..+|..+++.................. .+..++++
T Consensus 253 l~a~d~~tG~~~W~~~~~~~-~~-p~--~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~ 326 (377)
T TIGR03300 253 VAALDLRSGRVLWKRDASSY-QG-PA--VDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVG 326 (377)
T ss_pred EEEEECCCCcEEEeeccCCc-cC-ce--EeCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEE
Confidence 56788888888776653221 11 22 246778888899999999998865432110111111222222 46788899
Q ss_pred eCCCcEEEEecCCCceeEEEecCC-CC-eEEEEccCCcEEEEecCCeEEEE
Q psy6446 82 AEDKTVRLWDVSASAEVQKLEFGA-VP-NSLEISRDGTTITVTHGSCVTFL 130 (134)
Q Consensus 82 ~~d~~i~~~d~~~~~~~~~~~~~~-~v-~~~~~~~~~~~l~~~~~~~i~i~ 130 (134)
+.+|.+.++|..+++.+..+.... .+ ....+ .++++++.+.||.|..+
T Consensus 327 ~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~-~~~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 327 DFEGYLHWLSREDGSFVARLKTDGSGIASPPVV-VGDGLLVQTRDGDLYAF 376 (377)
T ss_pred eCCCEEEEEECCCCCEEEEEEcCCCccccCCEE-ECCEEEEEeCCceEEEe
Confidence 999999999999999998887543 33 22333 35566677788988765
No 290
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.71 E-value=2.4e-06 Score=55.03 Aligned_cols=110 Identities=15% Similarity=0.145 Sum_probs=77.6
Q ss_pred CCCceeeEEEccCCcEEEEec--CCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCC---CcEEEEecC
Q psy6446 19 PHIVKSSVHFATDSYRLATGS--NDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAED---KTVRLWDVS 93 (134)
Q Consensus 19 ~~~~~~~~~~~~~~~~l~~~~--~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~~d~~ 93 (134)
.+.+.. ..|+|.++.+++.+ ....+.++|++.. + .+......=+.+-|+|.+++++.++-| |.+.+||..
T Consensus 274 ~~pVhd-f~W~p~S~~F~vi~g~~pa~~s~~~lr~N--l--~~~~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~ 348 (561)
T COG5354 274 KDPVHD-FTWEPLSSRFAVISGYMPASVSVFDLRGN--L--RFYFPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPA 348 (561)
T ss_pred ccccee-eeecccCCceeEEecccccceeecccccc--e--EEecCCcccccccccCcccEEEEecCCccccceEEeccC
Confidence 344444 99999888876654 6678888998863 2 233444556788999999999887654 579999977
Q ss_pred CCceeEEEecCCCCeEEEEccCCcEEEEe-------cCCeEEEEeCC
Q psy6446 94 ASAEVQKLEFGAVPNSLEISRDGTTITVT-------HGSCVTFLDAN 133 (134)
Q Consensus 94 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-------~~~~i~i~d~~ 133 (134)
.......-.......-+.|+|+++++... .|..|.+||+.
T Consensus 349 ~rf~~~~~~~~~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~ 395 (561)
T COG5354 349 GRFKVAGAFNGLNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVY 395 (561)
T ss_pred CceEEEEEeecCCceEeeccCCceEEEecCCCcccccCcceEEEEec
Confidence 65444423334445667899999988753 16789999974
No 291
>KOG0309|consensus
Probab=98.70 E-value=6.6e-08 Score=64.74 Aligned_cols=130 Identities=15% Similarity=0.307 Sum_probs=90.0
Q ss_pred EeecCC--CceeeEE-eeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 4 VWDAVS--GEELHSF-QHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 4 v~d~~~--~~~~~~~-~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
+|++.. .+.+..+ .++...+.-+-|+| ....+++++-|..+..||++....+.............++|+.....+.
T Consensus 95 iwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vl 174 (1081)
T KOG0309|consen 95 IWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVL 174 (1081)
T ss_pred hhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchh
Confidence 566542 2233333 34555555599998 5567899999999999999998776666666667789999998555566
Q ss_pred EeeCCCcEEEEecCCCce-eEEEe-cCCCCeEEEEccC--CcEEEEecCCeEEEEeCC
Q psy6446 80 SCAEDKTVRLWDVSASAE-VQKLE-FGAVPNSLEISRD--GTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~-~~~~~-~~~~v~~~~~~~~--~~~l~~~~~~~i~i~d~~ 133 (134)
+.+..+.+.+||.+.+.. +..++ +-..+..+.|..- +..+.++.|++|+.||..
T Consensus 175 asshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~ 232 (1081)
T KOG0309|consen 175 ASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYS 232 (1081)
T ss_pred hhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccc
Confidence 667777899999987653 33333 3455666666643 344445678999999864
No 292
>KOG1334|consensus
Probab=98.69 E-value=7e-08 Score=61.51 Aligned_cols=132 Identities=20% Similarity=0.281 Sum_probs=97.9
Q ss_pred CeeEeecCCCceeeEEe--eCCCceeeEEEcc--CCcEEEEecCCCeEEEEECCCCCCC--CeEEeCCCCCEeEEEEeeC
Q psy6446 1 MGTVWDAVSGEELHSFQ--HPHIVKSSVHFAT--DSYRLATGSNDKNIRIYDLNKPDAE--PTVYRGHSSGIKHVQFFKN 74 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~l~~~~~d~~v~i~~~~~~~~~--~~~~~~~~~~v~~~~~~~~ 74 (134)
.|.+||+.++++...+. |...+.. ..|-| +..-+++++.||.+++=.+...... ...+..|.++|.-++.-|+
T Consensus 165 ~vv~WdW~~~~~~l~f~SGH~~NvfQ-aKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~ 243 (559)
T KOG1334|consen 165 QVVVWDWVSGSPKLSFESGHCNNVFQ-AKFIPFSGDRTIVTSSRDGQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPD 243 (559)
T ss_pred eEEeehhhccCcccccccccccchhh-hhccCCCCCcCceeccccCceeeeeeccccceecceecccccCccceeeecCC
Confidence 36799999999988887 5666666 66877 4467899999999998776543322 2335578999999999995
Q ss_pred C-CEEEEeeCCCcEEEEecCCCceeEEEec---C-C---CCeEEEEccCCc-EEEEe-cCCeEEEEeCC
Q psy6446 75 N-TRLISCAEDKTVRLWDVSASAEVQKLEF---G-A---VPNSLEISRDGT-TITVT-HGSCVTFLDAN 133 (134)
Q Consensus 75 ~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~---~-~---~v~~~~~~~~~~-~l~~~-~~~~i~i~d~~ 133 (134)
. ..|.++++|+.+.-+|++++.+...+.. . . ....++..|-.. .++++ .|..+++||.+
T Consensus 244 sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R 312 (559)
T KOG1334|consen 244 SPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQR 312 (559)
T ss_pred CCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccccccCChhhhhhhhccc
Confidence 5 5688999999999999998776555442 1 1 346778888665 45554 67888888875
No 293
>KOG2695|consensus
Probab=98.67 E-value=2.8e-07 Score=56.69 Aligned_cols=111 Identities=17% Similarity=0.220 Sum_probs=79.2
Q ss_pred eeEeecCCC-----ceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCC--CCeEEeCCCCCEeEEEE--
Q psy6446 2 GTVWDAVSG-----EELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDA--EPTVYRGHSSGIKHVQF-- 71 (134)
Q Consensus 2 i~v~d~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~--~~~~~~~~~~~v~~~~~-- 71 (134)
|..+|++.+ .+...+-|+..+.+ +..-. ++++|.+.+.+|.|++||++..++ ....+.+|...-..+-+
T Consensus 276 I~~iDLR~rnqG~~~~a~rlyh~Ssvts-lq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v 354 (425)
T KOG2695|consen 276 IFVIDLRCRNQGNGWCAQRLYHDSSVTS-LQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHV 354 (425)
T ss_pred EEEEEeeecccCCCcceEEEEcCcchhh-hhhhccccceEeeccCcCceeEeeehhhhcccceeeeeccccccccccccc
Confidence 567777643 45666667766655 55444 678899999999999999987554 23456777654443333
Q ss_pred eeCCCEEEEeeCCCcEEEEecCCCceeEEEecCC-----CCeEEEEc
Q psy6446 72 FKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGA-----VPNSLEIS 113 (134)
Q Consensus 72 ~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-----~v~~~~~~ 113 (134)
.+....+++++.|-..++|.++.+..+.+++.+. .+.+++|+
T Consensus 355 ~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~s~~e~d~~sv~~~ 401 (425)
T KOG2695|consen 355 KEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPYSASEVDIPSVAFD 401 (425)
T ss_pred ccccceEEEccCeeEEEEEecccCceeeccCCCCccccccccceehh
Confidence 4566788899999999999999999998887532 34556654
No 294
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.67 E-value=1.6e-05 Score=56.95 Aligned_cols=107 Identities=15% Similarity=0.198 Sum_probs=71.8
Q ss_pred eEEEcc-CCcEEEEecCCCeEEEEECCCCCCCCeEEeC---------------CCCCEeEEEEeeCCCEEE-EeeCCCcE
Q psy6446 25 SVHFAT-DSYRLATGSNDKNIRIYDLNKPDAEPTVYRG---------------HSSGIKHVQFFKNNTRLI-SCAEDKTV 87 (134)
Q Consensus 25 ~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~---------------~~~~v~~~~~~~~~~~l~-~~~~d~~i 87 (134)
.++++| ++..+++.+.++.|++||..++.. ..+.+ .-.....++++|+++.|+ +-..++.|
T Consensus 687 gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v--~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~I 764 (1057)
T PLN02919 687 DVCFEPVNEKVYIAMAGQHQIWEYNISDGVT--RVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSI 764 (1057)
T ss_pred EEEEecCCCeEEEEECCCCeEEEEECCCCeE--EEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeE
Confidence 388999 566667777788999999876431 11111 112456799999988554 55567899
Q ss_pred EEEecCCCceeEEEe-----------c-----------CCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 88 RLWDVSASAEVQKLE-----------F-----------GAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 88 ~~~d~~~~~~~~~~~-----------~-----------~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
++||+.++....... . -....+++++++|..+++. .++.|++||..
T Consensus 765 rv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~ 833 (1057)
T PLN02919 765 RALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPA 833 (1057)
T ss_pred EEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECC
Confidence 999998765321110 0 1134689999999876664 67999999975
No 295
>KOG4190|consensus
Probab=98.65 E-value=2.8e-07 Score=60.25 Aligned_cols=132 Identities=17% Similarity=0.336 Sum_probs=87.5
Q ss_pred CeeEeecCC-------CceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeC-CCCCEeEEEEe
Q psy6446 1 MGTVWDAVS-------GEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRG-HSSGIKHVQFF 72 (134)
Q Consensus 1 ~i~v~d~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~~~~v~~~~~~ 72 (134)
||++|.++. ..+..+++.+...+..+.|-.+-+.+++ .||.+.+||.--+....++... ..+.+..+.--
T Consensus 758 TVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S--cD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl 835 (1034)
T KOG4190|consen 758 TVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS--CDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCL 835 (1034)
T ss_pred eEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeee--ccCcceeecccccchhHhhhcCcccCCCceeEec
Confidence 578898753 2255666644444444888777666655 4789999997665544333221 12333333333
Q ss_pred e--CCCEEEE-eeCCCcEEEEecCCCceeEEEec------CCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 73 K--NNTRLIS-CAEDKTVRLWDVSASAEVQKLEF------GAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 73 ~--~~~~l~~-~~~d~~i~~~d~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
+ +...++. ++...+++++|-+.+.....++. ...+++++..+.|+.++++ ++|.|.+.|.++
T Consensus 836 ~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~ 907 (1034)
T KOG4190|consen 836 ENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARN 907 (1034)
T ss_pred ccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCC
Confidence 3 3334444 47788999999998887776663 2457899999999999987 779999998764
No 296
>KOG4640|consensus
Probab=98.65 E-value=4.2e-07 Score=59.75 Aligned_cols=91 Identities=15% Similarity=0.108 Sum_probs=72.9
Q ss_pred CceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEe-EEEEeeCCCEEEEeeCCCcEEEEecCCCceeE
Q psy6446 21 IVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIK-HVQFFKNNTRLISCAEDKTVRLWDVSASAEVQ 99 (134)
Q Consensus 21 ~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 99 (134)
.+.. +.|+|.-..||.+..+|.+-+..++ ..+. ..+.-+...++ +++|.|||+.|+.|-.||+|++.|..++..+.
T Consensus 22 ~i~~-~ewnP~~dLiA~~t~~gelli~R~n-~qRl-wtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~ 98 (665)
T KOG4640|consen 22 NIKR-IEWNPKMDLIATRTEKGELLIHRLN-WQRL-WTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV 98 (665)
T ss_pred ceEE-EEEcCccchhheeccCCcEEEEEec-ccee-EeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence 3344 9999999999999999999988887 3443 34454666666 99999999999999999999999999988777
Q ss_pred E--EecCCCCeEEEEcc
Q psy6446 100 K--LEFGAVPNSLEISR 114 (134)
Q Consensus 100 ~--~~~~~~v~~~~~~~ 114 (134)
. +.....+.++-|++
T Consensus 99 ~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 99 SFLFSVETDISKGIWDR 115 (665)
T ss_pred ccccccccchheeeccc
Confidence 6 34566777777763
No 297
>KOG4532|consensus
Probab=98.61 E-value=8.8e-06 Score=48.85 Aligned_cols=102 Identities=13% Similarity=0.085 Sum_probs=71.3
Q ss_pred CCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCe----EEeCCCCCEeEEEEeeCCC--EEEEeeCCCcEEEEecC
Q psy6446 20 HIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPT----VYRGHSSGIKHVQFFKNNT--RLISCAEDKTVRLWDVS 93 (134)
Q Consensus 20 ~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~~~d~~ 93 (134)
..... ..|+.....+|++..||.+.|||++....+.. ....|.+.+..+.|++.|. .|+..-.-+.+.+.|++
T Consensus 204 D~gF~-~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R 282 (344)
T KOG4532|consen 204 DHGFY-NSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTR 282 (344)
T ss_pred CCcee-eeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcc
Confidence 34444 89999999999999999999999987543221 2345889999999998553 44555556789999999
Q ss_pred CCceeEEEec---------CCCCeEEEEccCCcEEEEe
Q psy6446 94 ASAEVQKLEF---------GAVPNSLEISRDGTTITVT 122 (134)
Q Consensus 94 ~~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~ 122 (134)
+++..+.+.. ...+..-.|+.++.-+.+.
T Consensus 283 ~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~ 320 (344)
T KOG4532|consen 283 NYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVK 320 (344)
T ss_pred cCceeeEEecCccccccccccccccccccCCCcccccc
Confidence 9876655542 1235666676666544443
No 298
>KOG1912|consensus
Probab=98.61 E-value=3.7e-06 Score=57.04 Aligned_cols=129 Identities=12% Similarity=0.183 Sum_probs=94.5
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCC------------cEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDS------------YRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHV 69 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~ 69 (134)
|.+-|..+-+.+..++++...+..+.|.|.. -.|+++...|.|.+||....... ..+..|..++.++
T Consensus 37 V~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~-~~l~~~~~~~qdl 115 (1062)
T KOG1912|consen 37 VSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVI-NWLSHSNDSVQDL 115 (1062)
T ss_pred EEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhh-hhhcCCCcchhhe
Confidence 5677888888888888666666669998731 24677778899999999886543 3566788899999
Q ss_pred EEee---CC-CEEEEeeCCCcEEEEecCCCceeEEEecC-CCCeEEEEccCC-cEE-EEecCCeEEEEe
Q psy6446 70 QFFK---NN-TRLISCAEDKTVRLWDVSASAEVQKLEFG-AVPNSLEISRDG-TTI-TVTHGSCVTFLD 131 (134)
Q Consensus 70 ~~~~---~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~v~~~~~~~~~-~~l-~~~~~~~i~i~d 131 (134)
+|-+ +. ..|+......++.+|+..+|+.+...... ....|+.++|-. +.+ +.+..|.+.+-+
T Consensus 116 ~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~ 184 (1062)
T KOG1912|consen 116 CWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCK 184 (1062)
T ss_pred eeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEe
Confidence 9987 33 45667777789999999999998887754 444668888843 433 345666665543
No 299
>KOG1409|consensus
Probab=98.60 E-value=1.8e-06 Score=53.25 Aligned_cols=79 Identities=15% Similarity=0.280 Sum_probs=63.2
Q ss_pred CCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCcee--EEEecCCCCeEEEEccCCcEEEE-ecCCeEEEEe
Q psy6446 55 EPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEV--QKLEFGAVPNSLEISRDGTTITV-THGSCVTFLD 131 (134)
Q Consensus 55 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d 131 (134)
+...+.+|.+.+.+++|.|..+.|.++..|..+.+||+..++-. ....+...+..+...+.-+.+.+ +.||.|.+||
T Consensus 189 ~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~ 268 (404)
T KOG1409|consen 189 LITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWN 268 (404)
T ss_pred eEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEe
Confidence 34567899999999999999999999999999999999754433 33346677888887777666555 5789999999
Q ss_pred CC
Q psy6446 132 AN 133 (134)
Q Consensus 132 ~~ 133 (134)
++
T Consensus 269 mn 270 (404)
T KOG1409|consen 269 MN 270 (404)
T ss_pred cc
Confidence 75
No 300
>KOG1645|consensus
Probab=98.59 E-value=5.1e-07 Score=56.55 Aligned_cols=89 Identities=16% Similarity=0.101 Sum_probs=70.1
Q ss_pred EEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCC-EEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCc-EEEE
Q psy6446 44 IRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNT-RLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGT-TITV 121 (134)
Q Consensus 44 v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~ 121 (134)
+++.+..+.+. ...+..+...|..++|+|..+ .+..++.+..|++.|+++......+.....+.+.+|+-|.. ++.+
T Consensus 175 v~~l~~~~fks-sq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~~~wSC~wDlde~h~IYa 253 (463)
T KOG1645|consen 175 VQKLESHDFKS-SQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYNQIWSCCWDLDERHVIYA 253 (463)
T ss_pred eEEeccCCcch-hhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheeccCCceeeeeccCCcceeEE
Confidence 44444333332 235667888999999999776 56788889999999999999988888889999999998874 5666
Q ss_pred e-cCCeEEEEeCC
Q psy6446 122 T-HGSCVTFLDAN 133 (134)
Q Consensus 122 ~-~~~~i~i~d~~ 133 (134)
| ..|.|.+||++
T Consensus 254 Gl~nG~VlvyD~R 266 (463)
T KOG1645|consen 254 GLQNGMVLVYDMR 266 (463)
T ss_pred eccCceEEEEEcc
Confidence 6 46999999986
No 301
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.59 E-value=2.1e-05 Score=46.95 Aligned_cols=100 Identities=17% Similarity=0.141 Sum_probs=68.8
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCC---CCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHS---SGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l 78 (134)
+..||..+|+.+..+.......... ...+..+++++.++.++.+|..+++.......... ..........++..+
T Consensus 48 l~~~d~~tG~~~W~~~~~~~~~~~~--~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (238)
T PF13360_consen 48 LYALDAKTGKVLWRFDLPGPISGAP--VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRL 125 (238)
T ss_dssp EEEEETTTSEEEEEEECSSCGGSGE--EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEE
T ss_pred EEEEECCCCCEEEEeecccccccee--eecccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEE
Confidence 6789999999999888655544422 22456667777888999999888775543222221 112233333458888
Q ss_pred EEeeCCCcEEEEecCCCceeEEEec
Q psy6446 79 ISCAEDKTVRLWDVSASAEVQKLEF 103 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~~~~~~~~ 103 (134)
+.+..++.+..+|.++|+.+.....
T Consensus 126 ~~~~~~g~l~~~d~~tG~~~w~~~~ 150 (238)
T PF13360_consen 126 YVGTSSGKLVALDPKTGKLLWKYPV 150 (238)
T ss_dssp EEEETCSEEEEEETTTTEEEEEEES
T ss_pred EEEeccCcEEEEecCCCcEEEEeec
Confidence 8888899999999999999887764
No 302
>KOG2066|consensus
Probab=98.57 E-value=5.4e-06 Score=56.15 Aligned_cols=100 Identities=18% Similarity=0.179 Sum_probs=73.8
Q ss_pred cCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeC-----CCEEEEeeCCCcEEEEecC---CCceeEEE
Q psy6446 30 TDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKN-----NTRLISCAEDKTVRLWDVS---ASAEVQKL 101 (134)
Q Consensus 30 ~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~~~d~~i~~~d~~---~~~~~~~~ 101 (134)
.+|.++++++.||.|.|-.+.+..... .+ ....++.+++++|+ .+.+++|+..| +.++.-+ ....+...
T Consensus 81 ~~Gey~asCS~DGkv~I~sl~~~~~~~-~~-df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~ 157 (846)
T KOG2066|consen 81 LEGEYVASCSDDGKVVIGSLFTDDEIT-QY-DFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLS 157 (846)
T ss_pred cCCceEEEecCCCcEEEeeccCCccce-eE-ecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeee
Confidence 369999999999999999988766442 22 34568999999997 46788898888 7776532 12222222
Q ss_pred ecCCCCeEEEEccCCcEEEEecCCeEEEEeCCC
Q psy6446 102 EFGAVPNSLEISRDGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 102 ~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~t 134 (134)
...++|.+++|. |.+++=+.|-.|++||+.+
T Consensus 158 ~~eG~I~~i~W~--g~lIAWand~Gv~vyd~~~ 188 (846)
T KOG2066|consen 158 EGEGPIHSIKWR--GNLIAWANDDGVKVYDTPT 188 (846)
T ss_pred cCccceEEEEec--CcEEEEecCCCcEEEeccc
Confidence 246889999997 7788888888899999753
No 303
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.52 E-value=2.4e-05 Score=50.70 Aligned_cols=128 Identities=11% Similarity=0.076 Sum_probs=85.6
Q ss_pred CeeEeecCCCceeeEEe-eCCCceeeEEEccCCcEEEEe------cC-----CCeEEEEECCCCCCCCeEEeCCCCCEeE
Q psy6446 1 MGTVWDAVSGEELHSFQ-HPHIVKSSVHFATDSYRLATG------SN-----DKNIRIYDLNKPDAEPTVYRGHSSGIKH 68 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~------~~-----d~~v~i~~~~~~~~~~~~~~~~~~~v~~ 68 (134)
++++|.+..++.+.+-. ..-..+. +.|++.|++|++- +. ..++++++++..... ....-.++|..
T Consensus 203 ~~~i~sIp~~s~l~tk~lfk~~~~q-LkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~--V~~~~~~pVhd 279 (561)
T COG5354 203 MVRILSIPKNSVLVTKNLFKVSGVQ-LKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIP--VEKDLKDPVHD 279 (561)
T ss_pred EEEEEEccCCCeeeeeeeEeecccE-EEEecCCceEEEEEEEeeecccceeccceEEEEeecccccc--eecccccccee
Confidence 36778877666665444 2333445 8999999887642 11 246788888754332 23356789999
Q ss_pred EEEeeCCCEEEE--eeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEE-ec---CCeEEEEeCC
Q psy6446 69 VQFFKNNTRLIS--CAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITV-TH---GSCVTFLDAN 133 (134)
Q Consensus 69 ~~~~~~~~~l~~--~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~---~~~i~i~d~~ 133 (134)
.+|.|.++.+++ |..+-.+.++|++.. +.....+..=+.+.|+|.+++++. |- .|.+.+||..
T Consensus 280 f~W~p~S~~F~vi~g~~pa~~s~~~lr~N--l~~~~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~ 348 (561)
T COG5354 280 FTWEPLSSRFAVISGYMPASVSVFDLRGN--LRFYFPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPA 348 (561)
T ss_pred eeecccCCceeEEecccccceeecccccc--eEEecCCcccccccccCcccEEEEecCCccccceEEeccC
Confidence 999998877664 456778999998865 333333445567888999888775 32 3788888753
No 304
>KOG2314|consensus
Probab=98.50 E-value=6.6e-06 Score=53.85 Aligned_cols=119 Identities=8% Similarity=0.078 Sum_probs=77.8
Q ss_pred eeEEeeCCCceeeEEEccCCcEEEEecC---CCeEEEEECCC-CCCCCeEEeCCCCCEeEEEEeeCCCEEEEe---eCCC
Q psy6446 13 LHSFQHPHIVKSSVHFATDSYRLATGSN---DKNIRIYDLNK-PDAEPTVYRGHSSGIKHVQFFKNNTRLISC---AEDK 85 (134)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~---d~~v~i~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~---~~d~ 85 (134)
+..++-...++. .+|-|.|+.+++-+. ..++.+|.+.+ ...+.....-.....+.+.|+|.|++++.+ +..|
T Consensus 439 ve~velke~vi~-FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk~~~N~vfwsPkG~fvvva~l~s~~g 517 (698)
T KOG2314|consen 439 VEVVELKESVIA-FAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDKKFANTVFWSPKGRFVVVAALVSRRG 517 (698)
T ss_pred ceeeecchheee-eeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcccccceEEEcCCCcEEEEEEeccccc
Confidence 444445566666 999999998876543 35788888874 222211111223557889999999998754 4578
Q ss_pred cEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEec-------CCeEEEEeC
Q psy6446 86 TVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVTH-------GSCVTFLDA 132 (134)
Q Consensus 86 ~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-------~~~i~i~d~ 132 (134)
.+..+|+........-. .....+.+.|+|.|+|+++++ |...++|+.
T Consensus 518 ~l~F~D~~~a~~k~~~~~eh~~at~veWDPtGRYvvT~ss~wrhk~d~GYri~tf 572 (698)
T KOG2314|consen 518 DLEFYDTDYADLKDTASPEHFAATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTF 572 (698)
T ss_pred ceEEEecchhhhhhccCccccccccceECCCCCEEEEeeehhhhccccceEEEEe
Confidence 89999987533222211 234567899999999999752 345666665
No 305
>KOG2041|consensus
Probab=98.48 E-value=4.4e-07 Score=60.96 Aligned_cols=119 Identities=14% Similarity=0.118 Sum_probs=86.2
Q ss_pred eEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEE-eCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEec
Q psy6446 14 HSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVY-RGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDV 92 (134)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 92 (134)
+++++++..+..+.|+.+.+.|-++..+|.|.+|-+-.+.-...+. ....+.|.+|+|+.+|..+....+||.|.+=.+
T Consensus 65 QtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsv 144 (1189)
T KOG2041|consen 65 QTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSV 144 (1189)
T ss_pred hhhccCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEee
Confidence 3456555555559999999999999999999999987754322222 234567899999999999999999998877655
Q ss_pred CCCceeEEEe-cCCCCeEEEEccCCcEEEEe-cCCeEEEEeCC
Q psy6446 93 SASAEVQKLE-FGAVPNSLEISRDGTTITVT-HGSCVTFLDAN 133 (134)
Q Consensus 93 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~ 133 (134)
.. ..+..-. .......+.|++|.+.++.+ ..|.+++||..
T Consensus 145 dG-NRIwgKeLkg~~l~hv~ws~D~~~~Lf~~ange~hlydnq 186 (1189)
T KOG2041|consen 145 DG-NRIWGKELKGQLLAHVLWSEDLEQALFKKANGETHLYDNQ 186 (1189)
T ss_pred cc-ceecchhcchheccceeecccHHHHHhhhcCCcEEEeccc
Confidence 43 3332222 23345688999998877765 67999999864
No 306
>KOG0309|consensus
Probab=98.48 E-value=1.2e-06 Score=59.03 Aligned_cols=115 Identities=20% Similarity=0.283 Sum_probs=84.7
Q ss_pred eeEeecCCC-ceeeEEeeC-CCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee-CCCEE
Q psy6446 2 GTVWDAVSG-EELHSFQHP-HIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK-NNTRL 78 (134)
Q Consensus 2 i~v~d~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l 78 (134)
+..||+++. .++..+... ..... ++|+.....+.+.+....+++||++.+..+...+++|...+..++|.. -...+
T Consensus 139 vh~wd~rSp~~p~ys~~~w~s~asq-Vkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~ 217 (1081)
T KOG0309|consen 139 VHAWDMRSPHRPFYSTSSWRSAASQ-VKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEI 217 (1081)
T ss_pred ceeeeccCCCcceeeeecccccCce-eeecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhh
Confidence 567898764 356555533 33444 999984445555566678999999998888888899999999999976 45568
Q ss_pred EEeeCCCcEEEEecCCCc--eeEEEecCCCCeEEEEccCCc
Q psy6446 79 ISCAEDKTVRLWDVSASA--EVQKLEFGAVPNSLEISRDGT 117 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~~~--~~~~~~~~~~v~~~~~~~~~~ 117 (134)
.+++.|++++.||..... .........++....+-|-|.
T Consensus 218 ~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~ 258 (1081)
T KOG0309|consen 218 MSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGE 258 (1081)
T ss_pred cccCCCCceeeecccccccccceeccccCcceeccccccCc
Confidence 899999999999987543 344445567788788888664
No 307
>KOG4640|consensus
Probab=98.48 E-value=1.9e-06 Score=56.79 Aligned_cols=71 Identities=14% Similarity=0.189 Sum_probs=61.9
Q ss_pred CCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCe-EEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 63 SSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPN-SLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~-~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
...+..+.|+|.-..++++..+|.+.+..+. .+.+..++ ++..+. +++|.|||+.++++ .||+|++-|+++
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~ 93 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEK 93 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccC
Confidence 4568889999999999999999999999887 78888888 555565 99999999999999 789999999864
No 308
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.48 E-value=5e-05 Score=45.76 Aligned_cols=125 Identities=17% Similarity=0.134 Sum_probs=72.9
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEc-cCCcEEEEecCCCeEEEEECCCCCCCCeEEeC-----CCCCEeEEEEeeCC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFA-TDSYRLATGSNDKNIRIYDLNKPDAEPTVYRG-----HSSGIKHVQFFKNN 75 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~ 75 (134)
|..||..+++.. .+.... ... +.+. +++ .++.+...+ +.++|..+++.. ..... .....+.+++.|+|
T Consensus 24 i~~~~~~~~~~~-~~~~~~-~~G-~~~~~~~g-~l~v~~~~~-~~~~d~~~g~~~-~~~~~~~~~~~~~~~ND~~vd~~G 97 (246)
T PF08450_consen 24 IYRVDPDTGEVE-VIDLPG-PNG-MAFDRPDG-RLYVADSGG-IAVVDPDTGKVT-VLADLPDGGVPFNRPNDVAVDPDG 97 (246)
T ss_dssp EEEEETTTTEEE-EEESSS-EEE-EEEECTTS-EEEEEETTC-EEEEETTTTEEE-EEEEEETTCSCTEEEEEEEE-TTS
T ss_pred EEEEECCCCeEE-EEecCC-Cce-EEEEccCC-EEEEEEcCc-eEEEecCCCcEE-EEeeccCCCcccCCCceEEEcCCC
Confidence 444555544332 233222 444 7777 565 455555544 455588775422 12221 33567899999999
Q ss_pred CEEEEeeCC--------CcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 76 TRLISCAED--------KTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 76 ~~l~~~~~d--------~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
+..++.... +.+..++.. ++.......-...+.++|+|+++.|..+ ..+.|..|++.
T Consensus 98 ~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~ 164 (246)
T PF08450_consen 98 NLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLD 164 (246)
T ss_dssp -EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEE
T ss_pred CEEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeecccccceeEEEecc
Confidence 977765543 446666666 4544444344556899999999877654 45888888863
No 309
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.46 E-value=5.5e-05 Score=45.57 Aligned_cols=116 Identities=15% Similarity=0.152 Sum_probs=76.5
Q ss_pred eEeecCCCceeeEEeeCCCceeeEEEccCCcEEE-EecCCCeEEEEECCCCCC-CC--eEE-eCCC--CCEeEEEEeeCC
Q psy6446 3 TVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLA-TGSNDKNIRIYDLNKPDA-EP--TVY-RGHS--SGIKHVQFFKNN 75 (134)
Q Consensus 3 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~v~i~~~~~~~~-~~--~~~-~~~~--~~v~~~~~~~~~ 75 (134)
..++.. ++.......-... +.++|+|+++.|+ +-+..+.|..+++..... .. ..+ .... +..-.+++..+|
T Consensus 118 ~~~~~~-~~~~~~~~~~~~p-NGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G 195 (246)
T PF08450_consen 118 YRIDPD-GKVTVVADGLGFP-NGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDG 195 (246)
T ss_dssp EEEETT-SEEEEEEEEESSE-EEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS
T ss_pred EEECCC-CeEEEEecCcccc-cceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCC
Confidence 344444 4443333343333 4499999998775 557788899999865332 11 112 1122 247789999999
Q ss_pred CEEEEeeCCCcEEEEecCCCceeEEEecC-CCCeEEEEc-cCCcEEEE
Q psy6446 76 TRLISCAEDKTVRLWDVSASAEVQKLEFG-AVPNSLEIS-RDGTTITV 121 (134)
Q Consensus 76 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~v~~~~~~-~~~~~l~~ 121 (134)
+..++....+.|.++|.. ++.+..+..+ ..+.+++|. ++...|.+
T Consensus 196 ~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~v 242 (246)
T PF08450_consen 196 NLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFGGPDGKTLYV 242 (246)
T ss_dssp -EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEESTTSSEEEE
T ss_pred CEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEECCCCCEEEE
Confidence 988888888999999987 8888877765 678999994 66555544
No 310
>KOG1832|consensus
Probab=98.45 E-value=3.2e-07 Score=62.97 Aligned_cols=118 Identities=16% Similarity=0.262 Sum_probs=86.6
Q ss_pred eeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCC--cEEEE
Q psy6446 13 LHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDK--TVRLW 90 (134)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~~ 90 (134)
.+.|..+...++|++|+.+.++|+.|+..|.|++++..++... ....+|..+++.+.-+.+|..+++.+.-. ...+|
T Consensus 1094 w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e-~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW 1172 (1516)
T KOG1832|consen 1094 WRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSME-ESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALW 1172 (1516)
T ss_pred chhhhccccceeeEEeecCCceEEeeeccceEEEEEccCcccc-ccccccccccccccccCCcceeeeeccccCchHHHh
Confidence 4455555677788999999999999999999999999997655 35688999999999999998877655433 46789
Q ss_pred ecCC-CceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 91 DVSA-SAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 91 d~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
+... +..... -..-.+++|+...+.-+.| ......+||+.|
T Consensus 1173 ~~~s~~~~~Hs---f~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT 1215 (1516)
T KOG1832|consen 1173 DASSTGGPRHS---FDEDKAVKFSNSLQFRALGTEADDALLYDVQT 1215 (1516)
T ss_pred ccccccCcccc---ccccceeehhhhHHHHHhcccccceEEEeccc
Confidence 8764 222222 2344678888775544443 456788899875
No 311
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.45 E-value=5.6e-05 Score=48.36 Aligned_cols=126 Identities=16% Similarity=0.124 Sum_probs=77.8
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEe
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISC 81 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 81 (134)
+..+|..+|+.+..++....+...... ++..+++++.++.+..+|..+++..... . ..+.+.+.-.. .+..++.+
T Consensus 77 v~a~d~~tG~~~W~~~~~~~~~~~p~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~-~-~~~~~~~~p~v-~~~~v~v~ 151 (377)
T TIGR03300 77 VVALDAETGKRLWRVDLDERLSGGVGA--DGGLVFVGTEKGEVIALDAEDGKELWRA-K-LSSEVLSPPLV-ANGLVVVR 151 (377)
T ss_pred EEEEEccCCcEeeeecCCCCcccceEE--cCCEEEEEcCCCEEEEEECCCCcEeeee-c-cCceeecCCEE-ECCEEEEE
Confidence 567888899998887744444332333 4678888889999999999887644321 1 11222211111 34567777
Q ss_pred eCCCcEEEEecCCCceeEEEecCCCCe------EEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 82 AEDKTVRLWDVSASAEVQKLEFGAVPN------SLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 82 ~~d~~i~~~d~~~~~~~~~~~~~~~v~------~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
..++.+..+|..+++.+.......+.. +.... ++..++...++.+..+|.+
T Consensus 152 ~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~-~~~v~~~~~~g~v~ald~~ 208 (377)
T TIGR03300 152 TNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIA-DGGVLVGFAGGKLVALDLQ 208 (377)
T ss_pred CCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEE-CCEEEEECCCCEEEEEEcc
Confidence 889999999999999887765433221 11111 2333333356778777764
No 312
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.41 E-value=2.7e-06 Score=35.17 Aligned_cols=39 Identities=33% Similarity=0.489 Sum_probs=31.4
Q ss_pred CceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEE
Q psy6446 10 GEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYD 48 (134)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~ 48 (134)
++++..+..+...+.++.|++++..+++++.|+.+++|+
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 455666775555666699999989999999999999986
No 313
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.41 E-value=3.6e-06 Score=51.52 Aligned_cols=112 Identities=20% Similarity=0.266 Sum_probs=76.9
Q ss_pred CceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEE--eCC-----CCCEeEEEEee-CCCEEEEeeCCCcEEEEec
Q psy6446 21 IVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVY--RGH-----SSGIKHVQFFK-NNTRLISCAEDKTVRLWDV 92 (134)
Q Consensus 21 ~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~--~~~-----~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~ 92 (134)
..+.++.|+.|...++++ .|-.|.+|++.......... +.| ..-|++..|+| ....+...+..|.|++-|+
T Consensus 173 yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~Dl 251 (460)
T COG5170 173 YHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDL 251 (460)
T ss_pred eEeeeeeecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhh
Confidence 344558888877777665 56789999987544322221 222 23578889999 4566777888899999999
Q ss_pred CCCce------eEEEe-----c------CCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 93 SASAE------VQKLE-----F------GAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 93 ~~~~~------~~~~~-----~------~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
+.... ..... + -..|..+.|+++|+++++-.--++.+||++
T Consensus 252 Rq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyltvkiwDvn 309 (460)
T COG5170 252 RQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYLTVKIWDVN 309 (460)
T ss_pred hhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccceEEEEecc
Confidence 85321 11111 0 246788999999999988666899999986
No 314
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.32 E-value=7.2e-05 Score=50.29 Aligned_cols=92 Identities=15% Similarity=0.133 Sum_probs=65.9
Q ss_pred eeEeecCC-----CceeeEEeeCCCceeeEEEccCCcEEEEec-CCCeEEEEECCCCCCCC----------eEEeCCCCC
Q psy6446 2 GTVWDAVS-----GEELHSFQHPHIVKSSVHFATDSYRLATGS-NDKNIRIYDLNKPDAEP----------TVYRGHSSG 65 (134)
Q Consensus 2 i~v~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~v~i~~~~~~~~~~----------~~~~~~~~~ 65 (134)
|.+.|..+ .+.+..+.-....-. +.++|||+++++++ .+..+.+.|+.+.+... .....-...
T Consensus 298 V~VID~~t~~~~~~~v~~yIPVGKsPHG-V~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlG 376 (635)
T PRK02888 298 VPVVDGRKAANAGSALTRYVPVPKNPHG-VNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLG 376 (635)
T ss_pred EEEEECCccccCCcceEEEEECCCCccc-eEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCCC
Confidence 66788877 355666665566666 99999999987765 48899999998744210 000111334
Q ss_pred EeEEEEeeCCCEEEEeeCCCcEEEEecCC
Q psy6446 66 IKHVQFFKNNTRLISCAEDKTVRLWDVSA 94 (134)
Q Consensus 66 v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 94 (134)
....+|.++|....+-.-|..|..||+..
T Consensus 377 PLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 377 PLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred cceEEECCCCCEEEeEeecceeEEEehHH
Confidence 56788888888888888999999999875
No 315
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.31 E-value=2.6e-06 Score=35.18 Aligned_cols=35 Identities=31% Similarity=0.675 Sum_probs=30.7
Q ss_pred eEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEe
Q psy6446 57 TVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWD 91 (134)
Q Consensus 57 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 91 (134)
..+..|...+.++.|.++++.+++++.|+.+++|+
T Consensus 6 ~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 6 KTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 34567888999999999899999999999999996
No 316
>KOG3621|consensus
Probab=98.31 E-value=1e-05 Score=54.13 Aligned_cols=93 Identities=17% Similarity=0.278 Sum_probs=69.2
Q ss_pred eeEeecCCCceee-EEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEE-----eCCCCCEeEEEEeeCC
Q psy6446 2 GTVWDAVSGEELH-SFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVY-----RGHSSGIKHVQFFKNN 75 (134)
Q Consensus 2 i~v~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~ 75 (134)
+++|+-..++... ...+...++.....+++..+.+.|+..|.|.++.++...+....+ +.|...|++++|++++
T Consensus 57 lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~ 136 (726)
T KOG3621|consen 57 VYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNG 136 (726)
T ss_pred EEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccc
Confidence 5666655444322 222455566668889999999999999999999988744333222 2367889999999999
Q ss_pred CEEEEeeCCCcEEEEecCC
Q psy6446 76 TRLISCAEDKTVRLWDVSA 94 (134)
Q Consensus 76 ~~l~~~~~d~~i~~~d~~~ 94 (134)
..+++|...|.|..-.+..
T Consensus 137 ~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 137 MKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred cEEeecCCCceEEEEEech
Confidence 9999999999998887766
No 317
>KOG1645|consensus
Probab=98.29 E-value=6.1e-06 Score=51.93 Aligned_cols=92 Identities=12% Similarity=0.092 Sum_probs=66.6
Q ss_pred eEeecCCCceeeEEeeCCCceeeEEEccCCc-EEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCC-CEEEE
Q psy6446 3 TVWDAVSGEELHSFQHPHIVKSSVHFATDSY-RLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNN-TRLIS 80 (134)
Q Consensus 3 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~ 80 (134)
++.+..+-+....+..+...+..++|+|..+ ++..++.+..|++.|+.+... ...+..+ ..+.+.+|.-|. .++..
T Consensus 176 ~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~-vssy~a~-~~~wSC~wDlde~h~IYa 253 (463)
T KOG1645|consen 176 QKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCV-VSSYIAY-NQIWSCCWDLDERHVIYA 253 (463)
T ss_pred EEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEeccccee-eeheecc-CCceeeeeccCCcceeEE
Confidence 3444444444444444455555599999665 788899999999999998554 3455556 788999998755 56778
Q ss_pred eeCCCcEEEEecCCCc
Q psy6446 81 CAEDKTVRLWDVSASA 96 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~ 96 (134)
|..+|.|.+||++..+
T Consensus 254 Gl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 254 GLQNGMVLVYDMRQPE 269 (463)
T ss_pred eccCceEEEEEccCCC
Confidence 8889999999998644
No 318
>KOG2066|consensus
Probab=98.28 E-value=0.00014 Score=49.71 Aligned_cols=124 Identities=13% Similarity=0.270 Sum_probs=81.5
Q ss_pred EeecCCCceeeEEeeCCCceeeEEEccC-----CcEEEEecCCCeEEEEECCCCCC-CCeEEeCCCCCEeEEEEeeCCCE
Q psy6446 4 VWDAVSGEELHSFQHPHIVKSSVHFATD-----SYRLATGSNDKNIRIYDLNKPDA-EPTVYRGHSSGIKHVQFFKNNTR 77 (134)
Q Consensus 4 v~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~~~d~~v~i~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~ 77 (134)
|-.+-+.+...++..+..+.+ ++++|+ .+++++|+..| +.++.-+.... ....+..-.++|.++.| .|++
T Consensus 97 I~sl~~~~~~~~~df~rpiks-ial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W--~g~l 172 (846)
T KOG2066|consen 97 IGSLFTDDEITQYDFKRPIKS-IALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKW--RGNL 172 (846)
T ss_pred EeeccCCccceeEecCCccee-EEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEe--cCcE
Confidence 333444444444554555555 999987 56799999988 77765443221 12235666789999999 4777
Q ss_pred EEEeeCCCcEEEEecCCCceeEEEecC-------CCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 78 LISCAEDKTVRLWDVSASAEVQKLEFG-------AVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
++=++.+| +++||+.+++.+..++.+ .....+.|.++ ..+++|...+|++..++
T Consensus 173 IAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~-~~LVIGW~d~v~i~~I~ 233 (846)
T KOG2066|consen 173 IAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDE-DRLVIGWGDSVKICSIK 233 (846)
T ss_pred EEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCC-CeEEEecCCeEEEEEEe
Confidence 77776666 899999988887766532 22356777655 56777766777776543
No 319
>KOG0882|consensus
Probab=98.26 E-value=8.2e-05 Score=47.82 Aligned_cols=97 Identities=18% Similarity=0.156 Sum_probs=72.8
Q ss_pred ecCCCeEEEEECCCCCC-CCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCC------CceeEEEe--------
Q psy6446 38 GSNDKNIRIYDLNKPDA-EPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSA------SAEVQKLE-------- 102 (134)
Q Consensus 38 ~~~d~~v~i~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~------~~~~~~~~-------- 102 (134)
...++.+.++|-....+ ......-|..+|..+.+++-+...++....|.|.-|.... .+....++
T Consensus 118 ~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f 197 (558)
T KOG0882|consen 118 LFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGF 197 (558)
T ss_pred cccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcc
Confidence 34578999999776553 3334456889999999999999999999999999998762 11111222
Q ss_pred --cCCCCeEEEEccCCcEEEE-ecCCeEEEEeCCC
Q psy6446 103 --FGAVPNSLEISRDGTTITV-THGSCVTFLDANS 134 (134)
Q Consensus 103 --~~~~v~~~~~~~~~~~l~~-~~~~~i~i~d~~t 134 (134)
......++.|+|++..+.. +.|..|++++.++
T Consensus 198 ~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~Kt 232 (558)
T KOG0882|consen 198 PKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKT 232 (558)
T ss_pred cccccCccceEEccccCcccccCcccEEEEEEecc
Confidence 2456789999999988886 5789999998764
No 320
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=98.24 E-value=9.8e-05 Score=38.69 Aligned_cols=65 Identities=15% Similarity=0.203 Sum_probs=51.0
Q ss_pred EeEEEEee-CC---CEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeC
Q psy6446 66 IKHVQFFK-NN---TRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 66 v~~~~~~~-~~---~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~ 132 (134)
|++|++.. ++ +.|+.|+.|..|++|+ ....+..+.....+.+++-...+++..+-.+|+|-+|+-
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~--~~e~~~Ei~e~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~ 70 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFK--GDEIVAEITETDKVTSLCSLGGGRFAYALANGTVGVYDR 70 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEe--CCcEEEEEecccceEEEEEcCCCEEEEEecCCEEEEEeC
Confidence 56666665 22 6799999999999996 457788888888999999888877666667888888764
No 321
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.23 E-value=3.6e-05 Score=49.97 Aligned_cols=117 Identities=14% Similarity=0.170 Sum_probs=74.0
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEec-CCCe--EEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGS-NDKN--IRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~--v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
|+++|+.++. +..+.+...+...-.|+|+|+.++..+ ..|. |.+++.+.... ..+....+.-....|+|||+++
T Consensus 264 iy~~dl~~~~-~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~--~riT~~~~~~~~p~~SpdG~~i 340 (425)
T COG0823 264 IYLMDLDGKN-LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV--TRLTFSGGGNSNPVWSPDGDKI 340 (425)
T ss_pred EEEEcCCCCc-ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce--eEeeccCCCCcCccCCCCCCEE
Confidence 6788888766 333554444444589999999987654 4454 55555554332 3333343444488899999999
Q ss_pred EEeeCC-Cc--EEEEecCCCceeEEEecCCCCeEEEEccCCcEEEE
Q psy6446 79 ISCAED-KT--VRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITV 121 (134)
Q Consensus 79 ~~~~~d-~~--i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 121 (134)
+..+.. |. |.+.|+.++...+.+..........|.+++..+..
T Consensus 341 ~~~~~~~g~~~i~~~~~~~~~~~~~lt~~~~~e~ps~~~ng~~i~~ 386 (425)
T COG0823 341 VFESSSGGQWDIDKNDLASGGKIRILTSTYLNESPSWAPNGRMIMF 386 (425)
T ss_pred EEEeccCCceeeEEeccCCCCcEEEccccccCCCCCcCCCCceEEE
Confidence 866643 44 66777766654555555555566777888876654
No 322
>KOG2395|consensus
Probab=98.22 E-value=0.00012 Score=48.05 Aligned_cols=129 Identities=14% Similarity=0.178 Sum_probs=83.0
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCc-------EEEEecCCCeEEEEECCCCCC-CCeEEeCCC----CCEeEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSY-------RLATGSNDKNIRIYDLNKPDA-EPTVYRGHS----SGIKHV 69 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~l~~~~~d~~v~i~~~~~~~~-~~~~~~~~~----~~v~~~ 69 (134)
++-.|++.|+.+...+.+.. ++-+.+.|+.+ .-+.|-.|..|+-||++-... ......+|. ....|.
T Consensus 358 l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~ 436 (644)
T KOG2395|consen 358 LYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCF 436 (644)
T ss_pred ceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeecccccccccccee
Confidence 34567888888877774444 33366766542 234566678899999885332 111222221 223333
Q ss_pred EEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEecCCeEEEEeC
Q psy6446 70 QFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 70 ~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~ 132 (134)
+-. ..-+++.|+.+|.|++||-...+....++ .+.+|..+..+.+|.+++++.+..+.+-++
T Consensus 437 aTT-~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~tyLlLi~t 499 (644)
T KOG2395|consen 437 ATT-ESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATCKTYLLLIDT 499 (644)
T ss_pred eec-CCceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEecccEEEEEEE
Confidence 333 34578999999999999963333333333 478999999999999999887777766654
No 323
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.18 E-value=0.00034 Score=45.20 Aligned_cols=124 Identities=9% Similarity=-0.030 Sum_probs=75.2
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEe
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISC 81 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 81 (134)
+..+|..+|+.+...+.... .. +. ..+..++.++.+|.+..+|..+++.................. .+..++.+
T Consensus 268 l~ald~~tG~~~W~~~~~~~-~~-~~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~ 341 (394)
T PRK11138 268 LVALDLRSGQIVWKREYGSV-ND-FA--VDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVG 341 (394)
T ss_pred EEEEECCCCCEEEeecCCCc-cC-cE--EECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEE
Confidence 44567777777665542211 11 11 246678888889999999998765322111000111122222 35677888
Q ss_pred eCCCcEEEEecCCCceeEEEecC-CCCe-EEEEccCCcEEEEecCCeEEEEeC
Q psy6446 82 AEDKTVRLWDVSASAEVQKLEFG-AVPN-SLEISRDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 82 ~~d~~i~~~d~~~~~~~~~~~~~-~~v~-~~~~~~~~~~l~~~~~~~i~i~d~ 132 (134)
+.+|.+...|..+++.+...... ..+. ...+ .+++.++.+.+|.|..++.
T Consensus 342 ~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~-~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 342 DSEGYLHWINREDGRFVAQQKVDSSGFLSEPVV-ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred eCCCEEEEEECCCCCEEEEEEcCCCcceeCCEE-ECCEEEEEeCCceEEEEeC
Confidence 99999999999999988777642 2232 2222 3566666778899988764
No 324
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=98.17 E-value=0.00052 Score=44.20 Aligned_cols=129 Identities=17% Similarity=0.225 Sum_probs=88.3
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecC---CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSN---DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 78 (134)
|.+.|..+.+......-...... ++++|+++.+.++.. ++.+.+.|..+.........+. .+ ..+++.|+++.+
T Consensus 98 v~vid~~~~~~~~~~~vG~~P~~-~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~-~P-~~~a~~p~g~~v 174 (381)
T COG3391 98 VSVIDTATNTVLGSIPVGLGPVG-LAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGN-TP-TGVAVDPDGNKV 174 (381)
T ss_pred EEEEcCcccceeeEeeeccCCce-EEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCC-Cc-ceEEECCCCCeE
Confidence 56677666666666664445556 999999988877655 6788888887765444333332 23 899999999977
Q ss_pred EEee-CCCcEEEEecCCCceeE-----EEecCCCCeEEEEccCCcEEEEe--cC--CeEEEEeCC
Q psy6446 79 ISCA-EDKTVRLWDVSASAEVQ-----KLEFGAVPNSLEISRDGTTITVT--HG--SCVTFLDAN 133 (134)
Q Consensus 79 ~~~~-~d~~i~~~d~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~--~~--~~i~i~d~~ 133 (134)
+... .++.+.+.|........ ..........+.++|+|..+... .+ +.+...|..
T Consensus 175 yv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~ 239 (381)
T COG3391 175 YVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTA 239 (381)
T ss_pred EEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCC
Confidence 6554 67899999976655443 12234556789999999866543 22 577777764
No 325
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.16 E-value=9.9e-05 Score=49.93 Aligned_cols=101 Identities=17% Similarity=0.192 Sum_probs=61.6
Q ss_pred eeeEEEccCCcEEEEec------CCC--eEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCC----------
Q psy6446 23 KSSVHFATDSYRLATGS------NDK--NIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAED---------- 84 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~~------~d~--~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------- 84 (134)
+...+.+|+|+.++... .|. .+.+.+.. ........+ .......|+|+++.+++....
T Consensus 352 vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g--g~~~~lt~g--~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~ 427 (591)
T PRK13616 352 ITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG--GVAVQVLEG--HSLTRPSWSLDADAVWVVVDGNTVVRVIRDP 427 (591)
T ss_pred cccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC--CcceeeecC--CCCCCceECCCCCceEEEecCcceEEEeccC
Confidence 34488999999887654 243 45555542 222222233 247889999998887776432
Q ss_pred --CcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEE
Q psy6446 85 --KTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTF 129 (134)
Q Consensus 85 --~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i 129 (134)
+.+.+.++..+.... ..+..|..+.|+|||..++...+++|.+
T Consensus 428 ~~gql~~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~~g~v~V 472 (591)
T PRK13616 428 ATGQLARTPVDASAVAS--RVPGPISELQLSRDGVRAAMIIGGKVYL 472 (591)
T ss_pred CCceEEEEeccCchhhh--ccCCCcCeEEECCCCCEEEEEECCEEEE
Confidence 223333333332222 2356799999999999887655666655
No 326
>KOG4190|consensus
Probab=98.14 E-value=6.6e-06 Score=54.15 Aligned_cols=107 Identities=18% Similarity=0.325 Sum_probs=73.0
Q ss_pred EEEccCCcEEEEecCCCeEEEEECCCCC------CCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeE
Q psy6446 26 VHFATDSYRLATGSNDKNIRIYDLNKPD------AEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQ 99 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~d~~v~i~~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 99 (134)
+.--.+.+.+++++.|.+|++|.++... ....++..|..+|.++.|-.+-+++++ -|+.|.+||.--++.+.
T Consensus 741 i~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S--cD~giHlWDPFigr~La 818 (1034)
T KOG4190|consen 741 IAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS--CDGGIHLWDPFIGRLLA 818 (1034)
T ss_pred HHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeee--ccCcceeecccccchhH
Confidence 4444467889999999999999987532 123457789999999999988888765 46789999987666665
Q ss_pred EEe---cCCCCeEEEEccC--CcEEEEe--cCCeEEEEeCCC
Q psy6446 100 KLE---FGAVPNSLEISRD--GTTITVT--HGSCVTFLDANS 134 (134)
Q Consensus 100 ~~~---~~~~v~~~~~~~~--~~~l~~~--~~~~i~i~d~~t 134 (134)
.+. ..+.+..+.--|+ ...+.++ ...+|+++|.++
T Consensus 819 q~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRs 860 (1034)
T KOG4190|consen 819 QMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARS 860 (1034)
T ss_pred hhhcCcccCCCceeEecccCcchheeeeccchhhheeeeccc
Confidence 443 1233333333343 3344333 457888888753
No 327
>KOG2114|consensus
Probab=98.13 E-value=0.001 Score=46.21 Aligned_cols=132 Identities=15% Similarity=0.182 Sum_probs=85.3
Q ss_pred eeEeecCCC------cee---eEEeeC----CCceeeEEEccCCcEEEEecCCCeEEEEECCC---CCCCCeEEeCCCCC
Q psy6446 2 GTVWDAVSG------EEL---HSFQHP----HIVKSSVHFATDSYRLATGSNDKNIRIYDLNK---PDAEPTVYRGHSSG 65 (134)
Q Consensus 2 i~v~d~~~~------~~~---~~~~~~----~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~---~~~~~~~~~~~~~~ 65 (134)
++|||++.- .++ ..+.+. ..+.++++.+.+-+.+++|-.+|.|..+.=+- ...-......-..+
T Consensus 94 lkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~p 173 (933)
T KOG2114|consen 94 LKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEP 173 (933)
T ss_pred EEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCC
Confidence 789998532 233 222212 34566699999999999999999999875321 11111112223568
Q ss_pred EeEEEEeeCCCEEEEeeCCCcEEEEecCCCce-eEEEe-cCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 66 IKHVQFFKNNTRLISCAEDKTVRLWDVSASAE-VQKLE-FGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 66 v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
|+.+.+..+++.++-+..-..|.+|.+....+ ...+. ++....|..+++....++++++..+.+||..
T Consensus 174 ITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~e~l~fY~sd 243 (933)
T KOG2114|consen 174 ITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAGSEFLYFYDSD 243 (933)
T ss_pred ceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEecCceEEEEcCC
Confidence 99999998888744344445689998874442 22233 4667889999887665677777778888753
No 328
>KOG3617|consensus
Probab=98.13 E-value=3.5e-06 Score=57.86 Aligned_cols=84 Identities=20% Similarity=0.313 Sum_probs=67.1
Q ss_pred CCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcE
Q psy6446 8 VSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTV 87 (134)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 87 (134)
.+|++...+..+-.+.+ ++|+|..-.|+.|=.-|.+.+|..++.+ .......|..++..+.|+|+|..++++..-|.+
T Consensus 48 dtGEPqr~Vt~P~hatS-LCWHpe~~vLa~gwe~g~~~v~~~~~~e-~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v 125 (1416)
T KOG3617|consen 48 DTGEPQRDVTYPVHATS-LCWHPEEFVLAQGWEMGVSDVQKTNTTE-THTVVETHPAPIQGLDWSHDGTVLMTLDNPGSV 125 (1416)
T ss_pred cCCCCCcccccceehhh-hccChHHHHHhhccccceeEEEecCCce-eeeeccCCCCCceeEEecCCCCeEEEcCCCcee
Confidence 34555444444444455 9999988888999889999999987744 345567799999999999999999999999999
Q ss_pred EEEecC
Q psy6446 88 RLWDVS 93 (134)
Q Consensus 88 ~~~d~~ 93 (134)
.+|.+.
T Consensus 126 ~lwr~d 131 (1416)
T KOG3617|consen 126 HLWRYD 131 (1416)
T ss_pred EEEEee
Confidence 999876
No 329
>KOG1008|consensus
Probab=98.12 E-value=4.4e-07 Score=59.98 Aligned_cols=112 Identities=15% Similarity=0.274 Sum_probs=78.5
Q ss_pred CCceeeEEEcc-CCcEEEEec----CCCeEEEEECCCC----CCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEE
Q psy6446 20 HIVKSSVHFAT-DSYRLATGS----NDKNIRIYDLNKP----DAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLW 90 (134)
Q Consensus 20 ~~~~~~~~~~~-~~~~l~~~~----~d~~v~i~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 90 (134)
....++++|++ |.+.|++|- .|..+.|||+.+. +....+..+.......++|-.+.+.+++|...+.+.++
T Consensus 102 ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~if 181 (783)
T KOG1008|consen 102 ARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIF 181 (783)
T ss_pred cccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccccccCccccccccCcchhhcccccchhhhh
Confidence 34455699998 667777773 3568999999875 11112222244456688888788888899988899999
Q ss_pred ecCCCceeEEEecCCCCeEEEEcc-CCcEEEEecCCeEEEEe
Q psy6446 91 DVSASAEVQKLEFGAVPNSLEISR-DGTTITVTHGSCVTFLD 131 (134)
Q Consensus 91 d~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~i~i~d 131 (134)
|++........-....+..+..+| .+.+++...||.|.+||
T Consensus 182 dlRqs~~~~~svnTk~vqG~tVdp~~~nY~cs~~dg~iAiwD 223 (783)
T KOG1008|consen 182 DLRQSLDSVSSVNTKYVQGITVDPFSPNYFCSNSDGDIAIWD 223 (783)
T ss_pred hhhhhhhhhhhhhhhhcccceecCCCCCceeccccCceeecc
Confidence 998433222222234677888889 67888888899999999
No 330
>KOG1912|consensus
Probab=98.09 E-value=0.00043 Score=47.67 Aligned_cols=132 Identities=10% Similarity=0.107 Sum_probs=90.5
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCC---C---eEEeCCCC---------
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAE---P---TVYRGHSS--------- 64 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~---~---~~~~~~~~--------- 64 (134)
++.+|+..+|+...++.....+.+|+.+.| |.+.+..-+..|.+.+.+.-...++ . +....|..
T Consensus 136 ~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~a 215 (1062)
T KOG1912|consen 136 TLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETA 215 (1062)
T ss_pred EEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhh
Confidence 478999999999999997778888899999 7778877777787777664321111 0 11111111
Q ss_pred ----------------CEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEec-CCCCeEEEEccCC--cEEEEe-cC
Q psy6446 65 ----------------GIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEF-GAVPNSLEISRDG--TTITVT-HG 124 (134)
Q Consensus 65 ----------------~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~v~~~~~~~~~--~~l~~~-~~ 124 (134)
-...++|+|.-+.++-..-...+.++|++-..++..... .+.+.-+.+-|++ ..+.+. .+
T Consensus 216 t~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~n 295 (1062)
T KOG1912|consen 216 TGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSN 295 (1062)
T ss_pred ccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecC
Confidence 013456788766666566667899999998888887774 3445567777776 356665 68
Q ss_pred CeEEEEeC
Q psy6446 125 SCVTFLDA 132 (134)
Q Consensus 125 ~~i~i~d~ 132 (134)
|.+.+|-.
T Consensus 296 G~ltirvr 303 (1062)
T KOG1912|consen 296 GRLTIRVR 303 (1062)
T ss_pred CeEEEEEe
Confidence 99988854
No 331
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.07 E-value=0.0001 Score=45.50 Aligned_cols=114 Identities=18% Similarity=0.344 Sum_probs=78.6
Q ss_pred CCceeeEEEccCCcEEEEecCCCeEEEEECCCCC-CCC---eEEeCCC------------CCEeEEEEeeCC--CEEEEe
Q psy6446 20 HIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPD-AEP---TVYRGHS------------SGIKHVQFFKNN--TRLISC 81 (134)
Q Consensus 20 ~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~-~~~---~~~~~~~------------~~v~~~~~~~~~--~~l~~~ 81 (134)
...++++.|...|.++++|...|.|.+|.-.... +.. ..+.+|. ..|..+.|-.++ ..++..
T Consensus 26 ad~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls 105 (460)
T COG5170 26 ADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS 105 (460)
T ss_pred cceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence 3456679999999999999999999998765422 111 1233443 357788887643 457788
Q ss_pred eCCCcEEEEecCCCce-------------------------------------eEE-------EecCCCCeEEEEccCCc
Q psy6446 82 AEDKTVRLWDVSASAE-------------------------------------VQK-------LEFGAVPNSLEISRDGT 117 (134)
Q Consensus 82 ~~d~~i~~~d~~~~~~-------------------------------------~~~-------~~~~~~v~~~~~~~~~~ 117 (134)
+.|.+|++|.+..... +.. -.|...+.+++|..|..
T Consensus 106 tNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~e 185 (460)
T COG5170 106 TNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDKE 185 (460)
T ss_pred cCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCchh
Confidence 8999999998754310 000 00223467888988888
Q ss_pred EEEEecCCeEEEEeCC
Q psy6446 118 TITVTHGSCVTFLDAN 133 (134)
Q Consensus 118 ~l~~~~~~~i~i~d~~ 133 (134)
.++++.+-+|.+|+++
T Consensus 186 t~lSaDdLrINLWnl~ 201 (460)
T COG5170 186 TLLSADDLRINLWNLE 201 (460)
T ss_pred eeeeccceeeeecccc
Confidence 8888888899999874
No 332
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=98.07 E-value=0.00026 Score=37.12 Aligned_cols=90 Identities=17% Similarity=0.232 Sum_probs=61.0
Q ss_pred cEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEE
Q psy6446 33 YRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEI 112 (134)
Q Consensus 33 ~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~ 112 (134)
+.|++|+.|..|++|+-.. ....... ...|..+.-... ..++.+.++|+|-+|+- ...+...+.+..+.++.+
T Consensus 16 ~eLlvGs~D~~IRvf~~~e---~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~--~~RlWRiKSK~~~~~~~~ 88 (111)
T PF14783_consen 16 NELLVGSDDFEIRVFKGDE---IVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVYDR--SQRLWRIKSKNQVTSMAF 88 (111)
T ss_pred ceEEEecCCcEEEEEeCCc---EEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEEeC--cceeeeeccCCCeEEEEE
Confidence 6799999999999998543 3333333 356777766654 66888999999999974 445555666666777665
Q ss_pred cc-C--C-cEEEEe-cCCeEEE
Q psy6446 113 SR-D--G-TTITVT-HGSCVTF 129 (134)
Q Consensus 113 ~~-~--~-~~l~~~-~~~~i~i 129 (134)
.. + | .-|+++ ++|.|-+
T Consensus 89 ~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 89 YDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred EcCCCCCceEEEEEecCCeEEe
Confidence 43 3 3 356666 6787743
No 333
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.06 E-value=0.00015 Score=51.49 Aligned_cols=108 Identities=11% Similarity=0.088 Sum_probs=73.3
Q ss_pred CceeeEEEccCCcEEEEecC------CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeC---CCcEEEEe
Q psy6446 21 IVKSSVHFATDSYRLATGSN------DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAE---DKTVRLWD 91 (134)
Q Consensus 21 ~~~~~~~~~~~~~~l~~~~~------d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d 91 (134)
..+. +.|..||.++++.+- ...+++|+-. +. +...-..-.+--..++|.|.|+.+++.-. ...|.+|.
T Consensus 211 ~~~~-ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~-L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE 287 (928)
T PF04762_consen 211 GRVR-ISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GE-LQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE 287 (928)
T ss_pred CceE-EEECCCCcEEEEEEEEcCCCceeEEEEECCC-ce-EEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe
Confidence 3444 999999999998764 2578999865 22 21121222344467899999999987654 33567775
Q ss_pred cCCCceeEEEec-----CCCCeEEEEccCCcEEEEecCCeEEEEeC
Q psy6446 92 VSASAEVQKLEF-----GAVPNSLEISRDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 92 ~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~~~i~i~d~ 132 (134)
++|-....+.. ...+..+.|++++..|+.--...|.+|-.
T Consensus 288 -rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~vqLWt~ 332 (928)
T PF04762_consen 288 -RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDRVQLWTR 332 (928)
T ss_pred -cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCCceEEEe
Confidence 44544444432 45789999999999999865555999865
No 334
>KOG1008|consensus
Probab=98.01 E-value=1.5e-06 Score=57.55 Aligned_cols=130 Identities=15% Similarity=0.167 Sum_probs=81.3
Q ss_pred CeeEeecCCC--ceee--EEee-CCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee-C
Q psy6446 1 MGTVWDAVSG--EELH--SFQH-PHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK-N 74 (134)
Q Consensus 1 ~i~v~d~~~~--~~~~--~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~ 74 (134)
.+.|||+.++ .+.. .+.. ......+++|-.+.+.+++|.....+.++|++...... .......+..+...| .
T Consensus 130 ~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~--~svnTk~vqG~tVdp~~ 207 (783)
T KOG1008|consen 130 SLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSV--SSVNTKYVQGITVDPFS 207 (783)
T ss_pred CccceecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhh--hhhhhhhcccceecCCC
Confidence 3679999876 2222 2221 22222347888888899999998899999998432111 112334566777888 6
Q ss_pred CCEEEEeeCCCcEEEEe-cCCCc-eeEEEec-----CCCCeEEEEccCCc--EEEEecC-CeEEEEeCC
Q psy6446 75 NTRLISCAEDKTVRLWD-VSASA-EVQKLEF-----GAVPNSLEISRDGT--TITVTHG-SCVTFLDAN 133 (134)
Q Consensus 75 ~~~l~~~~~d~~i~~~d-~~~~~-~~~~~~~-----~~~v~~~~~~~~~~--~l~~~~~-~~i~i~d~~ 133 (134)
..++++.. |+.+.+|| .++-+ ++..+.+ ...+..++|.|... ..+...| +.|+.||+.
T Consensus 208 ~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 208 PNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred CCceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 77776655 99999999 33322 2222222 12478899999653 3333444 899999874
No 335
>KOG3617|consensus
Probab=97.99 E-value=4.9e-05 Score=52.63 Aligned_cols=109 Identities=12% Similarity=0.078 Sum_probs=78.9
Q ss_pred CceeeEEEccCCcEEEEecC----CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCc
Q psy6446 21 IVKSSVHFATDSYRLATGSN----DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASA 96 (134)
Q Consensus 21 ~~~~~~~~~~~~~~l~~~~~----d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 96 (134)
.+.+...|+|...++++++. .|.|.||- +++.+... ...+-.+++++|+|..-.|+.+=+-|.+.+|...+.+
T Consensus 16 avsti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~--Vt~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e 92 (1416)
T KOG3617|consen 16 AVSTISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRD--VTYPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTE 92 (1416)
T ss_pred ccccccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCcc--cccceehhhhccChHHHHHhhccccceeEEEecCCce
Confidence 34444789999999887753 57888874 34442211 1223345779999988888888888999999876544
Q ss_pred ee-EEEecCCCCeEEEEccCCcEEEEecC-CeEEEEeC
Q psy6446 97 EV-QKLEFGAVPNSLEISRDGTTITVTHG-SCVTFLDA 132 (134)
Q Consensus 97 ~~-~~~~~~~~v~~~~~~~~~~~l~~~~~-~~i~i~d~ 132 (134)
.. ....|+.++..+.|+|+|..++++.. |.+.+|..
T Consensus 93 ~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~ 130 (1416)
T KOG3617|consen 93 THTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRY 130 (1416)
T ss_pred eeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEe
Confidence 32 23347889999999999999998854 99999865
No 336
>KOG1920|consensus
Probab=97.97 E-value=0.00047 Score=49.34 Aligned_cols=129 Identities=14% Similarity=0.107 Sum_probs=76.9
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEec---CCCeEEEEECCCCCCC--CeEEeCCCCCEeEEEEeeCCC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGS---NDKNIRIYDLNKPDAE--PTVYRGHSSGIKHVQFFKNNT 76 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~d~~v~i~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~ 76 (134)
|+|||-+ |..-..-+.....-.+++|.|.|..+++-. .|+.|.++.-+.-..- ...+.....++..++|+.++.
T Consensus 224 irV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sd 302 (1265)
T KOG1920|consen 224 IRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSD 302 (1265)
T ss_pred EEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecCCCC
Confidence 6788865 544433334444556699999999998753 4557888875542211 111223334589999999999
Q ss_pred EEEE---eeCCCcEEEEecCCCceeEEE--ecCCCCeEEEEccCCc--EEEEecCCeEEEEeC
Q psy6446 77 RLIS---CAEDKTVRLWDVSASAEVQKL--EFGAVPNSLEISRDGT--TITVTHGSCVTFLDA 132 (134)
Q Consensus 77 ~l~~---~~~d~~i~~~d~~~~~~~~~~--~~~~~v~~~~~~~~~~--~l~~~~~~~i~i~d~ 132 (134)
.|+. ......|++|-+.+-...... ..+... -+.|+|... ..+...+|...++|.
T Consensus 303 iLAv~~~~~e~~~v~lwt~~NyhWYLKq~l~~~~~~-~~~W~p~~~~~L~v~~~sG~~~v~~~ 364 (1265)
T KOG1920|consen 303 ILAVVTSNLENSLVQLWTTGNYHWYLKQELQFSQKA-LLMWDPVTEKTLHVLRESGQRLVRDF 364 (1265)
T ss_pred ceeeeecccccceEEEEEecCeEEEEEEEEeccccc-cccccCCCceeEEEEecCCcEEEEEE
Confidence 9987 444455999987765433222 222222 277887542 233345566666553
No 337
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=97.95 E-value=0.00064 Score=43.93 Aligned_cols=97 Identities=10% Similarity=-0.055 Sum_probs=58.6
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCC----CEeEEEEeeCCCE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSS----GIKHVQFFKNNTR 77 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~ 77 (134)
+..+|.++|+.+...+......+.... .+..++.+..++.+..+|..+++........... ....... .+..
T Consensus 132 l~ald~~tG~~~W~~~~~~~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v--~~~~ 207 (394)
T PRK11138 132 VYALNAEDGEVAWQTKVAGEALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPAT--AFGG 207 (394)
T ss_pred EEEEECCCCCCcccccCCCceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEE--ECCE
Confidence 567888899988887744433332222 2456777888899999999887654322111000 0011111 2345
Q ss_pred EEEeeCCCcEEEEecCCCceeEEEe
Q psy6446 78 LISCAEDKTVRLWDVSASAEVQKLE 102 (134)
Q Consensus 78 l~~~~~d~~i~~~d~~~~~~~~~~~ 102 (134)
++.+..++.+...|..+++......
T Consensus 208 v~~~~~~g~v~a~d~~~G~~~W~~~ 232 (394)
T PRK11138 208 AIVGGDNGRVSAVLMEQGQLIWQQR 232 (394)
T ss_pred EEEEcCCCEEEEEEccCChhhheec
Confidence 6667788888888888887665543
No 338
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.94 E-value=0.00019 Score=49.84 Aligned_cols=88 Identities=19% Similarity=0.192 Sum_probs=59.5
Q ss_pred eeEeecCC-Cc-eee-EEe--eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCC
Q psy6446 2 GTVWDAVS-GE-ELH-SFQ--HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNT 76 (134)
Q Consensus 2 i~v~d~~~-~~-~~~-~~~--~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 76 (134)
+..||.+- +. ++. ... ....-++|++-+.+| +|++|+.+|.||+||- .+......+.+-..+|.+++.+.||+
T Consensus 554 lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~-~g~~AKT~lp~lG~pI~~iDvt~DGk 631 (794)
T PF08553_consen 554 LFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDR-LGKRAKTALPGLGDPIIGIDVTADGK 631 (794)
T ss_pred eEEeccCCCCCceeeccccccccCCCceEEEecCCc-eEEEEeCCCcEEeecc-cchhhhhcCCCCCCCeeEEEecCCCc
Confidence 56778763 22 221 111 234445656665555 7999999999999994 34444455677789999999999999
Q ss_pred EEEEeeCCCcEEEEec
Q psy6446 77 RLISCAEDKTVRLWDV 92 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~ 92 (134)
++++.+. ..+.+++.
T Consensus 632 wilaTc~-tyLlLi~t 646 (794)
T PF08553_consen 632 WILATCK-TYLLLIDT 646 (794)
T ss_pred EEEEeec-ceEEEEEE
Confidence 9876554 45666664
No 339
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.89 E-value=0.0015 Score=40.20 Aligned_cols=120 Identities=19% Similarity=0.238 Sum_probs=77.7
Q ss_pred eEeecCCCceeeEEee-C-CCceeeEEEccCCcEEEEecC-----CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCC
Q psy6446 3 TVWDAVSGEELHSFQH-P-HIVKSSVHFATDSYRLATGSN-----DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNN 75 (134)
Q Consensus 3 ~v~d~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~l~~~~~-----d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 75 (134)
.++|....+....+.. . .....--.|+|||.+|...-+ .|.|=+||.+.+-...-.+..|.-....+.+.+||
T Consensus 94 ~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DG 173 (366)
T COG3490 94 MVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADG 173 (366)
T ss_pred EEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCC
Confidence 5778777766555541 1 122223678999999987644 36899999987554445677788788999999999
Q ss_pred CEEEEeeC------------------CCcEEEEecCCCceeEEEec-----CCCCeEEEEccCCcEEEEe
Q psy6446 76 TRLISCAE------------------DKTVRLWDVSASAEVQKLEF-----GAVPNSLEISRDGTTITVT 122 (134)
Q Consensus 76 ~~l~~~~~------------------d~~i~~~d~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~ 122 (134)
+.++.+.. ..++.+.|-.+++.+.+... .-.++.++..+||..++.+
T Consensus 174 rtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgc 243 (366)
T COG3490 174 RTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGC 243 (366)
T ss_pred cEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEE
Confidence 99876543 11334444445554443322 2356777788888766654
No 340
>KOG4649|consensus
Probab=97.87 E-value=0.0016 Score=39.54 Aligned_cols=94 Identities=12% Similarity=-0.013 Sum_probs=63.8
Q ss_pred CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCC-eE
Q psy6446 31 DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVP-NS 109 (134)
Q Consensus 31 ~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v-~~ 109 (134)
-|++++.|...|.+++.+..++..... +..-..-=......+++..+..++.|+.....|.++..++...+.++.+ .+
T Consensus 62 vgdfVV~GCy~g~lYfl~~~tGs~~w~-f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~s 140 (354)
T KOG4649|consen 62 VGDFVVLGCYSGGLYFLCVKTGSQIWN-FVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVS 140 (354)
T ss_pred ECCEEEEEEccCcEEEEEecchhheee-eeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceecc
Confidence 367799999999999999999865432 2222211123445568999999999999999999999888887754433 33
Q ss_pred EEEcc-CCcEEEEecCC
Q psy6446 110 LEISR-DGTTITVTHGS 125 (134)
Q Consensus 110 ~~~~~-~~~~l~~~~~~ 125 (134)
-+..| ++.+.++...|
T Consensus 141 P~i~~g~~sly~a~t~G 157 (354)
T KOG4649|consen 141 PVIAPGDGSLYAAITAG 157 (354)
T ss_pred ceecCCCceEEEEeccc
Confidence 44455 44444443333
No 341
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=97.87 E-value=0.0033 Score=42.97 Aligned_cols=105 Identities=13% Similarity=0.139 Sum_probs=69.2
Q ss_pred EEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEe--eCCCEEEEeeCCCcEEEEecC---------C
Q psy6446 26 VHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFF--KNNTRLISCAEDKTVRLWDVS---------A 94 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~~~d~~---------~ 94 (134)
+.-+.-++..++-+....+.|||.+.+.......-...+.|.+++|. |+++.+++.+-.+.|.++--. .
T Consensus 35 i~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~ 114 (631)
T PF12234_consen 35 ISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPS 114 (631)
T ss_pred EeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcc
Confidence 44444455555555566899999987652222111446889999996 589999999988888888431 1
Q ss_pred CceeEEEe----cCCCCeEEEEccCCcEEEEecCCeEEEEe
Q psy6446 95 SAEVQKLE----FGAVPNSLEISRDGTTITVTHGSCVTFLD 131 (134)
Q Consensus 95 ~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~i~i~d 131 (134)
...++.+. .+.+|....|.++|.+++++ ++.+.++|
T Consensus 115 w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s-GNqlfv~d 154 (631)
T PF12234_consen 115 WAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS-GNQLFVFD 154 (631)
T ss_pred cceeEEEEeecCCCCCccceeEecCCeEEEEe-CCEEEEEC
Confidence 22333333 24678899999998766554 56777775
No 342
>KOG2079|consensus
Probab=97.85 E-value=0.00014 Score=51.34 Aligned_cols=92 Identities=12% Similarity=0.207 Sum_probs=65.2
Q ss_pred CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEec-CCCCeE
Q psy6446 31 DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEF-GAVPNS 109 (134)
Q Consensus 31 ~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~v~~ 109 (134)
.+..++.|+..|.+-..|+...-.+...-..-.++|++++|+.+|+.++.|-.+|.|.+||+..++....+.. ..+..+
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~ 177 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTG 177 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccce
Confidence 3556888888899988888763222111223457899999999999999999999999999999888887763 334333
Q ss_pred ---EEEccCCcEEEEe
Q psy6446 110 ---LEISRDGTTITVT 122 (134)
Q Consensus 110 ---~~~~~~~~~l~~~ 122 (134)
+.+..++..+.++
T Consensus 178 vi~v~~t~~nS~llt~ 193 (1206)
T KOG2079|consen 178 VIFVGRTSQNSKLLTS 193 (1206)
T ss_pred EEEEEEeCCCcEEEEc
Confidence 3334444544444
No 343
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.85 E-value=0.00039 Score=45.52 Aligned_cols=56 Identities=14% Similarity=0.218 Sum_probs=38.1
Q ss_pred CCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeC
Q psy6446 75 NTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 75 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~ 132 (134)
|..|...+.+ .|.+||..+++.++.+.... +..+.|+++|.+++...+..+.+++.
T Consensus 117 G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~~-vk~V~Ws~~g~~val~t~~~i~il~~ 172 (443)
T PF04053_consen 117 GNLLGVKSSD-FICFYDWETGKLIRRIDVSA-VKYVIWSDDGELVALVTKDSIYILKY 172 (443)
T ss_dssp SSSEEEEETT-EEEEE-TTT--EEEEESS-E--EEEEE-TTSSEEEEE-S-SEEEEEE
T ss_pred CcEEEEECCC-CEEEEEhhHcceeeEEecCC-CcEEEEECCCCEEEEEeCCeEEEEEe
Confidence 6666555544 89999999999999887553 89999999999999877777777653
No 344
>KOG2114|consensus
Probab=97.84 E-value=0.00064 Score=47.11 Aligned_cols=104 Identities=15% Similarity=0.237 Sum_probs=70.9
Q ss_pred EEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCC-EeEEEEeeCCCEEEEeeCCC-----cEEEEecCCC----
Q psy6446 26 VHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSG-IKHVQFFKNNTRLISCAEDK-----TVRLWDVSAS---- 95 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~-----~i~~~d~~~~---- 95 (134)
-.|++.+..++.|+.+|.|.+.+-. ......+.++... |..+....+..+|++.++|+ .+++||+...
T Consensus 29 sc~~s~~~~vvigt~~G~V~~Ln~s--~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~ 106 (933)
T KOG2114|consen 29 SCCSSSTGSVVIGTADGRVVILNSS--FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNN 106 (933)
T ss_pred eEEcCCCceEEEeeccccEEEeccc--ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCC
Confidence 4567888899999999988877643 2332345556555 55555544557888877765 4899998632
Q ss_pred --cee---EEEe-----cCCCCeEEEEccCCcEEEEe-cCCeEEEEe
Q psy6446 96 --AEV---QKLE-----FGAVPNSLEISRDGTTITVT-HGSCVTFLD 131 (134)
Q Consensus 96 --~~~---~~~~-----~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d 131 (134)
.+. +.+. .+.++.+++.+.+-..+++| .+|.|..+.
T Consensus 107 sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~ 153 (933)
T KOG2114|consen 107 SPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYK 153 (933)
T ss_pred CcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEc
Confidence 223 2222 24567899999998899999 678887763
No 345
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.84 E-value=0.0027 Score=41.04 Aligned_cols=106 Identities=14% Similarity=0.260 Sum_probs=78.1
Q ss_pred EEEccCCcEEEE-ecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeC---CCcEEEEecCCCceeEEE
Q psy6446 26 VHFATDSYRLAT-GSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAE---DKTVRLWDVSASAEVQKL 101 (134)
Q Consensus 26 ~~~~~~~~~l~~-~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~~~~~~~ 101 (134)
+..++.++.++. ...++.+.+.|..+.........+. ....++++|+++.+..+.. ++.+.+.|..+.+.....
T Consensus 79 i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~--~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~ 156 (381)
T COG3391 79 VAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL--GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATI 156 (381)
T ss_pred eeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeecc--CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEE
Confidence 777787775544 4456889999976654433333333 6788999999988776555 688999999999988886
Q ss_pred ecCCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 102 EFGAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 102 ~~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
........++++|+|..+... .++.|.+.|..
T Consensus 157 ~vG~~P~~~a~~p~g~~vyv~~~~~~~v~vi~~~ 190 (381)
T COG3391 157 PVGNTPTGVAVDPDGNKVYVTNSDDNTVSVIDTS 190 (381)
T ss_pred ecCCCcceEEECCCCCeEEEEecCCCeEEEEeCC
Confidence 655444899999999876654 46899998864
No 346
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.84 E-value=0.00014 Score=32.16 Aligned_cols=34 Identities=12% Similarity=0.143 Sum_probs=29.8
Q ss_pred CCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCce
Q psy6446 63 SSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAE 97 (134)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 97 (134)
...|..++|+|....++.+..+|.|.++.+ +++.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 456999999999999999999999999988 5544
No 347
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.79 E-value=0.0028 Score=39.72 Aligned_cols=112 Identities=11% Similarity=0.143 Sum_probs=71.6
Q ss_pred CCceeeEEeeCCCceeeEEEccCCcEEEEecC-CCeEEEEECCC--CC---C-CCeEEeCCCCCEeEEEEeeCCCEEEEe
Q psy6446 9 SGEELHSFQHPHIVKSSVHFATDSYRLATGSN-DKNIRIYDLNK--PD---A-EPTVYRGHSSGIKHVQFFKNNTRLISC 81 (134)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~~v~i~~~~~--~~---~-~~~~~~~~~~~v~~~~~~~~~~~l~~~ 81 (134)
.+..++.+...-.+-+.++||||++.++.+.. .+.+.-+++.. .. . .........+..-.++...+|.+.+++
T Consensus 151 ~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a 230 (307)
T COG3386 151 DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAA 230 (307)
T ss_pred CCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEec
Confidence 45555555443344455999999987776644 47788887762 11 1 111222334566677777788877644
Q ss_pred eCCC-cEEEEecCCCceeEEEecC-CCCeEEEEc-cCCcEEEE
Q psy6446 82 AEDK-TVRLWDVSASAEVQKLEFG-AVPNSLEIS-RDGTTITV 121 (134)
Q Consensus 82 ~~d~-~i~~~d~~~~~~~~~~~~~-~~v~~~~~~-~~~~~l~~ 121 (134)
..+| .|..|+.. ++.+.....+ ..+.+++|- |+.+.|.+
T Consensus 231 ~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~i 272 (307)
T COG3386 231 VWGGGRVVRFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYI 272 (307)
T ss_pred ccCCceEEEECCC-CcEEEEEECCCCCCccceEeCCCcCEEEE
Confidence 4444 89999987 8888888876 777888885 44555544
No 348
>KOG0882|consensus
Probab=97.77 E-value=0.0015 Score=42.43 Aligned_cols=115 Identities=11% Similarity=0.148 Sum_probs=79.1
Q ss_pred eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCC-----CCCCe---------EEeCCCCCEeEEEEeeCCCEEEEeeC
Q psy6446 18 HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKP-----DAEPT---------VYRGHSSGIKHVQFFKNNTRLISCAE 83 (134)
Q Consensus 18 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~-----~~~~~---------~~~~~~~~v~~~~~~~~~~~l~~~~~ 83 (134)
|..++.. +..++-+..+.+....|.|..|..... ..... .+........++.|+|++..+.+-+.
T Consensus 143 H~sPV~~-i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~ 221 (558)
T KOG0882|consen 143 HFSPVKK-IRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNP 221 (558)
T ss_pred ccCceEE-EEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCc
Confidence 4445554 999999999999998999999987731 00100 11223456789999999999999999
Q ss_pred CCcEEEEecCCCceeEEEec---------------------------------C-CCCeEEEEccCCcEEEEecCCeEEE
Q psy6446 84 DKTVRLWDVSASAEVQKLEF---------------------------------G-AVPNSLEISRDGTTITVTHGSCVTF 129 (134)
Q Consensus 84 d~~i~~~d~~~~~~~~~~~~---------------------------------~-~~v~~~~~~~~~~~l~~~~~~~i~i 129 (134)
|..|++++.++++..+.+.. + ..-....|+..|++++-+.-=.|++
T Consensus 222 DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~gikv 301 (558)
T KOG0882|consen 222 DRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILGIKV 301 (558)
T ss_pred ccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeecceeEEE
Confidence 99999999998875543321 0 1224567888888887664444555
Q ss_pred EeCC
Q psy6446 130 LDAN 133 (134)
Q Consensus 130 ~d~~ 133 (134)
.++.
T Consensus 302 in~~ 305 (558)
T KOG0882|consen 302 INLD 305 (558)
T ss_pred EEee
Confidence 5543
No 349
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.76 E-value=0.0033 Score=39.67 Aligned_cols=128 Identities=13% Similarity=0.063 Sum_probs=77.7
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecC----------CCeEEEEECCCCCCCCeE-EeC-CC----CC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSN----------DKNIRIYDLNKPDAEPTV-YRG-HS----SG 65 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------d~~v~i~~~~~~~~~~~~-~~~-~~----~~ 65 (134)
++++|..+++.+-.+...-.. . +..+|+++.+++++. .-.|.+||..+....... +.. ++ ..
T Consensus 19 v~viD~d~~k~lGmi~~g~~~-~-~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~ 96 (342)
T PF06433_consen 19 VYVIDADSGKLLGMIDTGFLG-N-VALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPY 96 (342)
T ss_dssp EEEEETTTTEEEEEEEEESSE-E-EEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--
T ss_pred EEEEECCCCcEEEEeecccCC-c-eeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheeccc
Confidence 678999999988887743222 2 567899999887532 336899999875322111 111 11 22
Q ss_pred EeEEEEeeCCCEEEEee--CCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeC
Q psy6446 66 IKHVQFFKNNTRLISCA--EDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 66 v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~ 132 (134)
....+++.|+++++... -...|.+.|+..++.+..+..+++..-.- .++..+...|+||.+.-..+
T Consensus 97 ~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PGC~~iyP-~~~~~F~~lC~DGsl~~v~L 164 (342)
T PF06433_consen 97 KNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPGCWLIYP-SGNRGFSMLCGDGSLLTVTL 164 (342)
T ss_dssp GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTSEEEEEE-EETTEEEEEETTSCEEEEEE
T ss_pred ccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCCEEEEEe-cCCCceEEEecCCceEEEEE
Confidence 34567888999887543 34579999999998888776554322211 22334556677776665544
No 350
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.75 E-value=0.00024 Score=45.21 Aligned_cols=98 Identities=14% Similarity=0.133 Sum_probs=59.1
Q ss_pred ccCCcEEEEe---------cCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeE
Q psy6446 29 ATDSYRLATG---------SNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQ 99 (134)
Q Consensus 29 ~~~~~~l~~~---------~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 99 (134)
|||+++++.. +..+...++|+.++... .+......+....|+|+++.++... ++.|.+.+..++...+
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~--~l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~ 77 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEIT--PLTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQ 77 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEE--ESS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEE
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceE--ECcCCccccccceeecCCCeeEEEe-cCceEEEECCCCCeEE
Confidence 4666666553 22457889999885321 1222256789999999999988775 4679999887764333
Q ss_pred EEecC------------------CCCeEEEEccCCcEEEEe--cCCeEEE
Q psy6446 100 KLEFG------------------AVPNSLEISRDGTTITVT--HGSCVTF 129 (134)
Q Consensus 100 ~~~~~------------------~~v~~~~~~~~~~~l~~~--~~~~i~i 129 (134)
....+ ..-..+-||||+++|+.. .+..|..
T Consensus 78 lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~ 127 (353)
T PF00930_consen 78 LTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPE 127 (353)
T ss_dssp SES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-E
T ss_pred eccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCce
Confidence 22111 123678899999988864 3344433
No 351
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.74 E-value=0.004 Score=40.41 Aligned_cols=108 Identities=17% Similarity=0.232 Sum_probs=68.2
Q ss_pred eeEEEccCCcEEEEecCCCeEEEEECCCCCC------------------------------------------CCeEEeC
Q psy6446 24 SSVHFATDSYRLATGSNDKNIRIYDLNKPDA------------------------------------------EPTVYRG 61 (134)
Q Consensus 24 ~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~------------------------------------------~~~~~~~ 61 (134)
..+.|.++...|++|...|.|-+|.....+. +...+..
T Consensus 5 ~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~~~ 84 (395)
T PF08596_consen 5 THVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLLDA 84 (395)
T ss_dssp EEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE--
T ss_pred EEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhheec
Confidence 3477777777788887888777765432110 0012233
Q ss_pred CCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEec---------CCCCeEEEEcc-----CC---cEEEEe-c
Q psy6446 62 HSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEF---------GAVPNSLEISR-----DG---TTITVT-H 123 (134)
Q Consensus 62 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~---------~~~v~~~~~~~-----~~---~~l~~~-~ 123 (134)
..++|++++.+ |--+++.|+++|.+.+.|++....+..-.. ...+.++.|.. |+ -.+++| .
T Consensus 85 ~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn 163 (395)
T PF08596_consen 85 KQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTN 163 (395)
T ss_dssp -S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEET
T ss_pred cCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeC
Confidence 46789999987 667899999999999999998887776442 23466777762 33 245555 5
Q ss_pred CCeEEEEeC
Q psy6446 124 GSCVTFLDA 132 (134)
Q Consensus 124 ~~~i~i~d~ 132 (134)
.|.+.+|.+
T Consensus 164 ~G~v~~fkI 172 (395)
T PF08596_consen 164 SGNVLTFKI 172 (395)
T ss_dssp TSEEEEEEE
T ss_pred CCCEEEEEE
Confidence 699988865
No 352
>KOG1275|consensus
Probab=97.72 E-value=0.0001 Score=51.17 Aligned_cols=89 Identities=21% Similarity=0.244 Sum_probs=66.8
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEcc-CCcEEEEecCCCeEEEEECCCCCCC-C--eEEeCCCCCEeEEEEeeCCCE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFAT-DSYRLATGSNDKNIRIYDLNKPDAE-P--TVYRGHSSGIKHVQFFKNNTR 77 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~-~--~~~~~~~~~v~~~~~~~~~~~ 77 (134)
|+|||++..+.+.-++-+...-. +.|.| -...+++++..|...+-|..+...+ . .........+..++++++++.
T Consensus 248 vkVYDLRmmral~PI~~~~~P~f-lrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~a 326 (1118)
T KOG1275|consen 248 VKVYDLRMMRALSPIQFPYGPQF-LRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDA 326 (1118)
T ss_pred hhhhhhhhhhccCCcccccCchh-hhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCce
Confidence 57899988887777764444444 88888 4567888888999999884432222 2 233334456899999999999
Q ss_pred EEEeeCCCcEEEEe
Q psy6446 78 LISCAEDKTVRLWD 91 (134)
Q Consensus 78 l~~~~~d~~i~~~d 91 (134)
++.+..+|.|.+|.
T Consensus 327 lafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 327 LAFGDHEGHVNLWA 340 (1118)
T ss_pred EEEecccCcEeeec
Confidence 99999999999997
No 353
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=97.71 E-value=0.00024 Score=30.60 Aligned_cols=28 Identities=11% Similarity=0.128 Sum_probs=22.9
Q ss_pred CCeEEEEccCC---cEEEEecC-CeEEEEeCC
Q psy6446 106 VPNSLEISRDG---TTITVTHG-SCVTFLDAN 133 (134)
Q Consensus 106 ~v~~~~~~~~~---~~l~~~~~-~~i~i~d~~ 133 (134)
.+++++|+|++ .+|+.+.+ |.|.++|++
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R 33 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTR 33 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEcc
Confidence 57899999854 47777754 999999997
No 354
>KOG1920|consensus
Probab=97.70 E-value=0.0063 Score=44.09 Aligned_cols=68 Identities=15% Similarity=0.178 Sum_probs=52.5
Q ss_pred CCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEE
Q psy6446 20 HIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLW 90 (134)
Q Consensus 20 ~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 90 (134)
..+++ +.|..+.+.++.+..+|.|.+-|..+... .....-...|.+++|+||++.++.....+++.+-
T Consensus 69 ~~i~s-~~fl~d~~~i~v~~~~G~iilvd~et~~~--eivg~vd~GI~aaswS~Dee~l~liT~~~tll~m 136 (1265)
T KOG1920|consen 69 DEIVS-VQFLADTNSICVITALGDIILVDPETLEL--EIVGNVDNGISAASWSPDEELLALITGRQTLLFM 136 (1265)
T ss_pred cceEE-EEEecccceEEEEecCCcEEEEcccccce--eeeeeccCceEEEeecCCCcEEEEEeCCcEEEEE
Confidence 34555 88888999999999999999988776432 2233456789999999999999988887776554
No 355
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.69 E-value=0.0034 Score=38.31 Aligned_cols=42 Identities=12% Similarity=0.232 Sum_probs=36.6
Q ss_pred CCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecC
Q psy6446 63 SSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFG 104 (134)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 104 (134)
...|..|..+||++.|++..-+|.|.+|++..-+.......+
T Consensus 229 ~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~ 270 (282)
T PF15492_consen 229 QDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQD 270 (282)
T ss_pred CCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchh
Confidence 467999999999999999999999999999987777766543
No 356
>KOG4649|consensus
Probab=97.69 E-value=0.0035 Score=38.16 Aligned_cols=101 Identities=11% Similarity=0.025 Sum_probs=71.7
Q ss_pred CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCC-eE
Q psy6446 31 DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVP-NS 109 (134)
Q Consensus 31 ~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v-~~ 109 (134)
...+++.|+..+.+.--|..++........ ...+.+-+.- -+++++.|...|.+.+.+..+|.....+.....| ..
T Consensus 22 skT~v~igSHs~~~~avd~~sG~~~We~il--g~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~ 98 (354)
T KOG4649|consen 22 SKTLVVIGSHSGIVIAVDPQSGNLIWEAIL--GVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVR 98 (354)
T ss_pred CceEEEEecCCceEEEecCCCCcEEeehhh--CceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccc
Confidence 356778888888888888888764332222 2333333322 4677999999999999999999888877754444 34
Q ss_pred EEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 110 LEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 110 ~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
...++++..+.++ .|++.+..|.++
T Consensus 99 a~~d~~~glIycgshd~~~yalD~~~ 124 (354)
T KOG4649|consen 99 AQCDFDGGLIYCGSHDGNFYALDPKT 124 (354)
T ss_pred eEEcCCCceEEEecCCCcEEEecccc
Confidence 4567888888876 689999888764
No 357
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.68 E-value=0.0028 Score=41.27 Aligned_cols=107 Identities=20% Similarity=0.235 Sum_probs=65.3
Q ss_pred eEEEccCCcEEEEe-cCC----CeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCC-----------CcEE
Q psy6446 25 SVHFATDSYRLATG-SND----KNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAED-----------KTVR 88 (134)
Q Consensus 25 ~~~~~~~~~~l~~~-~~d----~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------~~i~ 88 (134)
...++|++++++.+ +.. ..++++|+.+++.....+... ....+.|.++++.++....+ ..|.
T Consensus 128 ~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~ 205 (414)
T PF02897_consen 128 GFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVY 205 (414)
T ss_dssp EEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEE
T ss_pred eeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCCcEEE
Confidence 47889999998865 222 369999999875333222221 12239999998887654422 2378
Q ss_pred EEecCCCcee--EEEecC--CC-CeEEEEccCCcEEEEe--c--C-CeEEEEeCC
Q psy6446 89 LWDVSASAEV--QKLEFG--AV-PNSLEISRDGTTITVT--H--G-SCVTFLDAN 133 (134)
Q Consensus 89 ~~d~~~~~~~--~~~~~~--~~-v~~~~~~~~~~~l~~~--~--~-~~i~i~d~~ 133 (134)
.|.+.+.... ..+... .. ...+..+++++++++. . + ..+.+.|+.
T Consensus 206 ~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~ 260 (414)
T PF02897_consen 206 RHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLD 260 (414)
T ss_dssp EEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECC
T ss_pred EEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEecc
Confidence 8888776543 333322 22 4578889999988753 2 3 467777664
No 358
>KOG1832|consensus
Probab=97.65 E-value=3.2e-05 Score=53.76 Aligned_cols=115 Identities=17% Similarity=0.112 Sum_probs=78.7
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCC--eEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDK--NIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~--~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
|++|++.+|.....+..++..++-+.-+.+|..+++.+.-. ...+|++.........+. .-.++.|+...+.-+
T Consensus 1125 ik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~~~Hsf~----ed~~vkFsn~~q~r~ 1200 (1516)
T KOG1832|consen 1125 IKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTGGPRHSFD----EDKAVKFSNSLQFRA 1200 (1516)
T ss_pred EEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhccccccCcccccc----ccceeehhhhHHHHH
Confidence 78999999999888885555555488888998877665433 467899876443333332 346788887655555
Q ss_pred EeeCCCcEEEEecCCCceeEEEec-----CCCCeEEEEccCCcEEE
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLEF-----GAVPNSLEISRDGTTIT 120 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~ 120 (134)
.|.......+||++++....++.. ...-++..|+|+..+++
T Consensus 1201 ~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIl 1246 (1516)
T KOG1832|consen 1201 LGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLIL 1246 (1516)
T ss_pred hcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEe
Confidence 555556789999999887766432 22336778888776655
No 359
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.63 E-value=0.00038 Score=30.79 Aligned_cols=28 Identities=25% Similarity=0.436 Sum_probs=25.5
Q ss_pred eeeEEEccCCcEEEEecCCCeEEEEECC
Q psy6446 23 KSSVHFATDSYRLATGSNDKNIRIYDLN 50 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~d~~v~i~~~~ 50 (134)
+.++.|+|...+||.++.+|.|.++.++
T Consensus 14 v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 14 VSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred EEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 4569999999999999999999999984
No 360
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=97.63 E-value=0.0062 Score=39.74 Aligned_cols=121 Identities=17% Similarity=0.164 Sum_probs=59.1
Q ss_pred CeeEeecCCCceeeEEe-eCCC--ceeeEEEcc--CCcEEEE-ecCCCeEEEEEC-CCCCC----CCeE---------E-
Q psy6446 1 MGTVWDAVSGEELHSFQ-HPHI--VKSSVHFAT--DSYRLAT-GSNDKNIRIYDL-NKPDA----EPTV---------Y- 59 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~-~~~~--~~~~~~~~~--~~~~l~~-~~~d~~v~i~~~-~~~~~----~~~~---------~- 59 (134)
++.+||+.+.+.++++. +.+. ... +.|.+ +..+-++ +...++|..|-- ..+.- .... +
T Consensus 223 ~l~vWD~~~r~~~Q~idLg~~g~~pLE-vRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp 301 (461)
T PF05694_consen 223 SLHVWDWSTRKLLQTIDLGEEGQMPLE-VRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILP 301 (461)
T ss_dssp EEEEEETTTTEEEEEEES-TTEEEEEE-EEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---
T ss_pred eEEEEECCCCcEeeEEecCCCCCceEE-EEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCccccc
Confidence 47899999999999998 3333 233 66654 3444333 334455555443 22110 0000 0
Q ss_pred ------eCCCCCEeEEEEeeCCCEEEEee-CCCcEEEEecCCCceeEEE---ecCC-----------------CCeEEEE
Q psy6446 60 ------RGHSSGIKHVQFFKNNTRLISCA-EDKTVRLWDVSASAEVQKL---EFGA-----------------VPNSLEI 112 (134)
Q Consensus 60 ------~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~---~~~~-----------------~v~~~~~ 112 (134)
..-..-++.+..|.|.++|..+. .+|.++.||+......+.. ...+ ..+-+..
T Consensus 302 ~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvql 381 (461)
T PF05694_consen 302 EMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQL 381 (461)
T ss_dssp GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE
T ss_pred ccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEE
Confidence 01135689999999999987554 5899999999875443322 2222 2355778
Q ss_pred ccCCcEEEEe
Q psy6446 113 SRDGTTITVT 122 (134)
Q Consensus 113 ~~~~~~l~~~ 122 (134)
|.||+.+..+
T Consensus 382 S~DGkRlYvT 391 (461)
T PF05694_consen 382 SLDGKRLYVT 391 (461)
T ss_dssp -TTSSEEEEE
T ss_pred ccCCeEEEEE
Confidence 8888776643
No 361
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.57 E-value=0.0049 Score=37.84 Aligned_cols=98 Identities=16% Similarity=0.227 Sum_probs=60.5
Q ss_pred CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEE----------
Q psy6446 31 DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQK---------- 100 (134)
Q Consensus 31 ~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~---------- 100 (134)
.++.|+.|..+| +.+++........... +...|..+...|+-+.++.-+ |+.+.++++..-.....
T Consensus 6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i~--~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~ 81 (275)
T PF00780_consen 6 WGDRLLVGTEDG-LYVYDLSDPSKPTRIL--KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSR 81 (275)
T ss_pred CCCEEEEEECCC-EEEEEecCCccceeEe--ecceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccccc
Confidence 578899998888 8999983333332222 334499999999877776654 48999999876443331
Q ss_pred -----EecCCCCeEEE---EccCCcEEEEecCCeEEEEeC
Q psy6446 101 -----LEFGAVPNSLE---ISRDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 101 -----~~~~~~v~~~~---~~~~~~~l~~~~~~~i~i~d~ 132 (134)
+.....+...+ -......+++....+|.+|..
T Consensus 82 ~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~ 121 (275)
T PF00780_consen 82 SLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEW 121 (275)
T ss_pred cccccccccCCeeEEeeccccccceEEEEEECCEEEEEEE
Confidence 11112233333 112234566666678888765
No 362
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.57 E-value=0.0088 Score=39.48 Aligned_cols=123 Identities=14% Similarity=0.098 Sum_probs=63.0
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCC---------CC-CCeEEeCCCCCEeEEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKP---------DA-EPTVYRGHSSGIKHVQF 71 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~---------~~-~~~~~~~~~~~v~~~~~ 71 (134)
|.+||+++++.+..++... +.. +.|++++++++..+.+ .+.+++.+.. -. ...........|.+..|
T Consensus 128 i~~yDw~~~~~i~~i~v~~-vk~-V~Ws~~g~~val~t~~-~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W 204 (443)
T PF04053_consen 128 ICFYDWETGKLIRRIDVSA-VKY-VIWSDDGELVALVTKD-SIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCW 204 (443)
T ss_dssp EEEE-TTT--EEEEESS-E--EE-EEE-TTSSEEEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEE
T ss_pred EEEEEhhHcceeeEEecCC-CcE-EEEECCCCEEEEEeCC-eEEEEEecchhcccccccCchhceEEEEEecceeEEEEE
Confidence 7899999999999998553 444 9999999999988765 5777765432 00 11223332567888888
Q ss_pred eeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEE-EecCCeEEEEeC
Q psy6446 72 FKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTIT-VTHGSCVTFLDA 132 (134)
Q Consensus 72 ~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~i~i~d~ 132 (134)
..+ .++-.... .++- +..|...-....+.++.-+...|....+. .-.++.+..+.+
T Consensus 205 ~~d--~fiYtT~~-~lkY--l~~Ge~~~i~~ld~~~yllgy~~~~~~ly~~Dr~~~v~~~~l 261 (443)
T PF04053_consen 205 VED--CFIYTTSN-HLKY--LVNGETGIIAHLDKPLYLLGYLPKENRLYLIDRDGNVISYEL 261 (443)
T ss_dssp ETT--EEEEE-TT-EEEE--EETTEEEEEEE-SS--EEEEEETTTTEEEEE-TT--EEEEE-
T ss_pred EcC--EEEEEcCC-eEEE--EEcCCcceEEEcCCceEEEEEEccCCEEEEEECCCCEEEEEE
Confidence 644 44433333 5554 34444333333355666667777544444 446777776654
No 363
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.53 E-value=0.0064 Score=36.97 Aligned_cols=109 Identities=16% Similarity=0.193 Sum_probs=63.2
Q ss_pred CceeeEEEccCCcEEEEecCCCeEEEEECCC--CCCCCeEE--------eCCCCCEeEEEEeeC-CCEEEEeeCCCcEEE
Q psy6446 21 IVKSSVHFATDSYRLATGSNDKNIRIYDLNK--PDAEPTVY--------RGHSSGIKHVQFFKN-NTRLISCAEDKTVRL 89 (134)
Q Consensus 21 ~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~--~~~~~~~~--------~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~ 89 (134)
..+-.++|+|.++.|+++-......++.++. ........ ......+.+++++|. +..++.+.....+..
T Consensus 118 ~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~ 197 (248)
T PF06977_consen 118 KGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLE 197 (248)
T ss_dssp S--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEE
T ss_pred cceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEE
Confidence 3344599999888887776666666666543 11111110 112346789999995 556667777888999
Q ss_pred EecCCCceeEEEecCC----------CCeEEEEccCCcEEEEecCCeEEEE
Q psy6446 90 WDVSASAEVQKLEFGA----------VPNSLEISRDGTTITVTHGSCVTFL 130 (134)
Q Consensus 90 ~d~~~~~~~~~~~~~~----------~v~~~~~~~~~~~l~~~~~~~i~i~ 130 (134)
+| .+|+.+..+.... ....++|+++|...+++.-+..+++
T Consensus 198 ~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsEpNlfy~f 247 (248)
T PF06977_consen 198 LD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSEPNLFYRF 247 (248)
T ss_dssp E--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEETTTEEEEE
T ss_pred EC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcCCceEEEe
Confidence 99 6778777666432 4679999999988888866665554
No 364
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.51 E-value=0.0084 Score=37.80 Aligned_cols=127 Identities=10% Similarity=0.116 Sum_probs=71.4
Q ss_pred eeEeecCCCc-eeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCC-CCeE-EeCCCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGE-ELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDA-EPTV-YRGHSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~-~~~~-~~~~~~~v~~~~~~~~~~~l 78 (134)
|.+|++...+ .+..-........ ......++++++|.....+.++.++.... .... .......+.++.+-++++.+
T Consensus 109 l~v~~l~~~~~l~~~~~~~~~~~i-~sl~~~~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~ 187 (321)
T PF03178_consen 109 LYVYDLDNSKTLLKKAFYDSPFYI-TSLSVFKNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTI 187 (321)
T ss_dssp EEEEEEETTSSEEEEEEE-BSSSE-EEEEEETTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEE
T ss_pred EEEEEccCcccchhhheecceEEE-EEEeccccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEE
Confidence 6788887666 4443333222221 33333467999998888888876554222 2111 12234568888888777799
Q ss_pred EEeeCCCcEEEEecCC-------Cc----eeEEEecCCCCeEE---EEccC--Cc-------EEEEecCCeEEE
Q psy6446 79 ISCAEDKTVRLWDVSA-------SA----EVQKLEFGAVPNSL---EISRD--GT-------TITVTHGSCVTF 129 (134)
Q Consensus 79 ~~~~~d~~i~~~d~~~-------~~----~~~~~~~~~~v~~~---~~~~~--~~-------~l~~~~~~~i~i 129 (134)
+.+..+|.+.++.... +. ....+..+..+.++ ++.|. +. .+.++.+|.|..
T Consensus 188 i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~ 261 (321)
T PF03178_consen 188 IVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGV 261 (321)
T ss_dssp EEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEE
T ss_pred EEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEE
Confidence 9999999999987752 22 23334456777777 44451 21 455567787763
No 365
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.50 E-value=0.013 Score=40.20 Aligned_cols=97 Identities=9% Similarity=0.098 Sum_probs=57.5
Q ss_pred eeeEEEccCCcEEEEecCC------------CeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEE-
Q psy6446 23 KSSVHFATDSYRLATGSND------------KNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRL- 89 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~d------------~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~- 89 (134)
.+...|+|+|..+.+.+.. +.+.+.+++.+.. .. ...+.|..+.|+|||..++... ++.|.+
T Consensus 399 ~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~-~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va 473 (591)
T PRK13616 399 LTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAV-AS---RVPGPISELQLSRDGVRAAMII-GGKVYLA 473 (591)
T ss_pred CCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchh-hh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEE
Confidence 4459999998877766432 2333334433221 11 2356799999999999987655 466666
Q ss_pred --EecCCCce-e---EEEe--cCCCCeEEEEccCCcEEEEecC
Q psy6446 90 --WDVSASAE-V---QKLE--FGAVPNSLEISRDGTTITVTHG 124 (134)
Q Consensus 90 --~d~~~~~~-~---~~~~--~~~~v~~~~~~~~~~~l~~~~~ 124 (134)
-....+.. + ..+. ....+..+.|.+++.+++...+
T Consensus 474 ~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~V~~~~ 516 (591)
T PRK13616 474 VVEQTEDGQYALTNPREVGPGLGDTAVSLDWRTGDSLVVGRSD 516 (591)
T ss_pred EEEeCCCCceeecccEEeecccCCccccceEecCCEEEEEecC
Confidence 34334431 1 1121 1233578999999987655443
No 366
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=97.46 E-value=0.0026 Score=37.89 Aligned_cols=63 Identities=11% Similarity=0.153 Sum_probs=46.7
Q ss_pred EeeCCCEEEEeeCCCcEEEEecCCCceeEEE---------------ecCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 71 FFKNNTRLISCAEDKTVRLWDVSASAEVQKL---------------EFGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 71 ~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~---------------~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
+..++.++++...+|.+++||+.+++....- .....|..+.++.+|.-++.-++|..+.||..
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsng~~y~y~~~ 95 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSNGDSYSYSPD 95 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeCCCEEEeccc
Confidence 3447889999999999999999987764432 12245677888888876666566778888753
No 367
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.36 E-value=0.012 Score=36.16 Aligned_cols=128 Identities=16% Similarity=0.211 Sum_probs=73.4
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeE-------------EeCCCCCEeE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTV-------------YRGHSSGIKH 68 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~-------------~~~~~~~v~~ 68 (134)
+.+++.........+.....+.. +..-++-+.+++-+ |+.++++++......... .......+..
T Consensus 18 l~~~~~~~~~~~~~i~~~~~I~q-l~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 95 (275)
T PF00780_consen 18 LYVYDLSDPSKPTRILKLSSITQ-LSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRSLPTKLPETKGVSF 95 (275)
T ss_pred EEEEEecCCccceeEeecceEEE-EEEecccCEEEEEc-CCccEEEEchhhccccccccccccccccccccccccCCeeE
Confidence 45566622222222222333445 77778777766654 499999998764322210 1112233444
Q ss_pred EE--EeeCCCEEEEeeCCCcEEEEecCCC-----ceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 69 VQ--FFKNNTRLISCAEDKTVRLWDVSAS-----AEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 69 ~~--~~~~~~~l~~~~~d~~i~~~d~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
.+ -.+.+...+.+...+.|.+|..... +..+.+..+..+..++|. +..++.+..+...+.|+.
T Consensus 96 f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~--~~~i~v~~~~~f~~idl~ 165 (275)
T PF00780_consen 96 FAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLPDPPSSIAFL--GNKICVGTSKGFYLIDLN 165 (275)
T ss_pred EeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcCCCcEEEEEe--CCEEEEEeCCceEEEecC
Confidence 44 1124444455555568888887653 456667778889999998 556666655667777765
No 368
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.36 E-value=0.013 Score=36.60 Aligned_cols=125 Identities=11% Similarity=0.092 Sum_probs=76.9
Q ss_pred eeEeecCCCceeeEEe-----eCCCceeeEEEccCCcEEEEecCCC-------eEEEEECCCCCCCCe----EEeCCCCC
Q psy6446 2 GTVWDAVSGEELHSFQ-----HPHIVKSSVHFATDSYRLATGSNDK-------NIRIYDLNKPDAEPT----VYRGHSSG 65 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~d~-------~v~i~~~~~~~~~~~----~~~~~~~~ 65 (134)
+...|..+|+.+.+.. +...+.. ++++++|..++.....| .+-+++....-.... ....-.+-
T Consensus 140 L~~ld~~sG~ll~q~~Lp~~~~~lSiRH-La~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y 218 (305)
T PF07433_consen 140 LVYLDARSGALLEQVELPPDLHQLSIRH-LAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGY 218 (305)
T ss_pred eEEEecCCCceeeeeecCccccccceee-EEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCc
Confidence 4566778888877643 3344555 88998887766654433 233333322110000 01123467
Q ss_pred EeEEEEeeCCCEEE-EeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEE
Q psy6446 66 IKHVQFFKNNTRLI-SCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTF 129 (134)
Q Consensus 66 v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i 129 (134)
+-++++++++..++ |+-..+.+.+||..+++.+...... .+..++-.+++ +++++..|.+..
T Consensus 219 ~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l~-D~cGva~~~~~-f~~ssG~G~~~~ 281 (305)
T PF07433_consen 219 IGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPLP-DACGVAPTDDG-FLVSSGQGQLIR 281 (305)
T ss_pred eEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccccC-ceeeeeecCCc-eEEeCCCccEEE
Confidence 89999999998775 5556778999999999887765432 34566666665 666665565443
No 369
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.34 E-value=0.015 Score=36.72 Aligned_cols=125 Identities=14% Similarity=0.128 Sum_probs=69.8
Q ss_pred eeEeecCCC-----ce--eeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCe-EEeCCCCCEeEEEEee
Q psy6446 2 GTVWDAVSG-----EE--LHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPT-VYRGHSSGIKHVQFFK 73 (134)
Q Consensus 2 i~v~d~~~~-----~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~ 73 (134)
|.++++.+. +. +...+..+.+.+ +.-- ++. |+++. .+.+.+|++........ ........+.++..
T Consensus 64 i~v~~i~~~~~~~~~l~~i~~~~~~g~V~a-i~~~-~~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~-- 137 (321)
T PF03178_consen 64 ILVFEISESPENNFKLKLIHSTEVKGPVTA-ICSF-NGR-LVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSV-- 137 (321)
T ss_dssp EEEEEECSS-----EEEEEEEEEESS-EEE-EEEE-TTE-EEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEE--
T ss_pred EEEEEEEcccccceEEEEEEEEeecCcceE-hhhh-CCE-EEEee-cCEEEEEEccCcccchhhheecceEEEEEEec--
Confidence 567777763 22 223335555544 4433 444 54443 37899999987652221 11122234445444
Q ss_pred CCCEEEEeeCCCcEEEEecCC-CceeEEEe---cCCCCeEEEEccCCcEEEEe-cCCeEEEEeC
Q psy6446 74 NNTRLISCAEDKTVRLWDVSA-SAEVQKLE---FGAVPNSLEISRDGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 74 ~~~~l~~~~~d~~i~~~d~~~-~~~~~~~~---~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~ 132 (134)
.+++++.+.....+.++..+. .+.+..+. ....+.++.+-+++..++++ .+|.+.++..
T Consensus 138 ~~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~ 201 (321)
T PF03178_consen 138 FKNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRY 201 (321)
T ss_dssp ETTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE
T ss_pred cccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEE
Confidence 477999999888888876554 22233332 23446778887666555555 6799988764
No 370
>KOG2444|consensus
Probab=97.33 E-value=0.0062 Score=36.18 Aligned_cols=102 Identities=13% Similarity=0.149 Sum_probs=60.4
Q ss_pred CcEEEEecCCCeEEEEECCCCCCCCeEEe-CCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEec-C-CCCe
Q psy6446 32 SYRLATGSNDKNIRIYDLNKPDAEPTVYR-GHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEF-G-AVPN 108 (134)
Q Consensus 32 ~~~l~~~~~d~~v~i~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~-~~v~ 108 (134)
+..+++|+.+|.|.+|..+........+. +.....+.+.--.++.+..++..++.|+.|++...+.+....+ . .+..
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e 149 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGE 149 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcc
Confidence 46788999999999998874222211111 1111222222223455778999999999999987776655442 2 3344
Q ss_pred EEEEccCCcEEEEe---cCCeEEEEeCC
Q psy6446 109 SLEISRDGTTITVT---HGSCVTFLDAN 133 (134)
Q Consensus 109 ~~~~~~~~~~l~~~---~~~~i~i~d~~ 133 (134)
....+..++++.++ .+..++.|+++
T Consensus 150 ~~ivv~sd~~i~~a~~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 150 ELIVVGSDEFLKIADTSHDRVLKKWNVE 177 (238)
T ss_pred eeEEecCCceEEeeccccchhhhhcchh
Confidence 44444445555543 45667777664
No 371
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=97.31 E-value=0.014 Score=35.73 Aligned_cols=120 Identities=13% Similarity=0.144 Sum_probs=71.5
Q ss_pred eeeEEeeCCCce-eeEEEccCCcEEEEecCCC--eEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEE
Q psy6446 12 ELHSFQHPHIVK-SSVHFATDSYRLATGSNDK--NIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVR 88 (134)
Q Consensus 12 ~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~d~--~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 88 (134)
.+..+.|....+ ..+.|..++.++-+.+.-| .++.+|+.+++..........----.++.. +++.....=.++...
T Consensus 35 vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~-~d~l~qLTWk~~~~f 113 (264)
T PF05096_consen 35 VVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL-GDKLYQLTWKEGTGF 113 (264)
T ss_dssp EEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE-TTEEEEEESSSSEEE
T ss_pred EEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE-CCEEEEEEecCCeEE
Confidence 455666655544 4477767888877777766 688899988653322211111112233333 223333445678899
Q ss_pred EEecCCCceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeCCC
Q psy6446 89 LWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDANS 134 (134)
Q Consensus 89 ~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~t 134 (134)
+||..+.+.+..+....+-..++ .++..+..+ ++.+|+.+|.++
T Consensus 114 ~yd~~tl~~~~~~~y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~ 158 (264)
T PF05096_consen 114 VYDPNTLKKIGTFPYPGEGWGLT--SDGKRLIMSDGSSRLYFLDPET 158 (264)
T ss_dssp EEETTTTEEEEEEE-SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT
T ss_pred EEccccceEEEEEecCCcceEEE--cCCCEEEEECCccceEEECCcc
Confidence 99999999999998888888888 445555544 678999998753
No 372
>KOG2079|consensus
Probab=97.26 E-value=0.0038 Score=44.69 Aligned_cols=67 Identities=21% Similarity=0.354 Sum_probs=48.9
Q ss_pred CCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEE---eeCCCEEEEeeCCCc
Q psy6446 19 PHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQF---FKNNTRLISCAEDKT 86 (134)
Q Consensus 19 ~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~~~d~~ 86 (134)
....+++++|+.+|..++.|-.+|.|.+||+..++. .+.+..|..+...+-+ ..++..++++...|.
T Consensus 129 v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~-l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs 198 (1206)
T KOG2079|consen 129 VQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKI-LKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS 198 (1206)
T ss_pred cCCcceeeEecCCCceeccccCCCcEEEEEccCCcc-eeeeeecCCccceEEEEEEeCCCcEEEEccCCCc
Confidence 344556699999999999999999999999998554 4566666655544443 335556777777775
No 373
>KOG2395|consensus
Probab=97.20 E-value=0.0055 Score=40.79 Aligned_cols=67 Identities=24% Similarity=0.293 Sum_probs=49.5
Q ss_pred eeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEec
Q psy6446 23 KSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDV 92 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 92 (134)
++|.+-. ...++++|+.+|.|++||- .+......+.+-..+|..+..+.+|++++..+ +..+.+.++
T Consensus 433 Fsc~aTT-~sG~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~t 499 (644)
T KOG2395|consen 433 FSCFATT-ESGYIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLIDT 499 (644)
T ss_pred cceeeec-CCceEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEEE
Confidence 4434443 3458999999999999997 44555556788889999999999999987544 345666554
No 374
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.11 E-value=0.002 Score=41.17 Aligned_cols=49 Identities=12% Similarity=0.095 Sum_probs=38.1
Q ss_pred CcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 85 KTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 85 ~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
+...++|+.+++..........+....|+|+|+.++...++.|.+.+..
T Consensus 23 ~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~~~nly~~~~~ 71 (353)
T PF00930_consen 23 GDYYIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFVRDNNLYLRDLA 71 (353)
T ss_dssp EEEEEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEEETTEEEEESST
T ss_pred eeEEEEecCCCceEECcCCccccccceeecCCCeeEEEecCceEEEECC
Confidence 4688999988765544434567899999999999999989999998764
No 375
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.08 E-value=0.037 Score=36.32 Aligned_cols=46 Identities=24% Similarity=0.415 Sum_probs=34.6
Q ss_pred eeEeecCCCceeeEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECC
Q psy6446 2 GTVWDAVSGEELHSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLN 50 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~ 50 (134)
|+||+. +|+.+..+. ..+.++. +.|+.+. .|++-..||.+++||+.
T Consensus 63 I~iys~-sG~ll~~i~w~~~~iv~-~~wt~~e-~LvvV~~dG~v~vy~~~ 109 (410)
T PF04841_consen 63 IQIYSS-SGKLLSSIPWDSGRIVG-MGWTDDE-ELVVVQSDGTVRVYDLF 109 (410)
T ss_pred EEEECC-CCCEeEEEEECCCCEEE-EEECCCC-eEEEEEcCCEEEEEeCC
Confidence 788885 588888877 3355566 9998765 55566689999999985
No 376
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=97.02 E-value=0.017 Score=34.50 Aligned_cols=69 Identities=10% Similarity=0.121 Sum_probs=48.5
Q ss_pred EccCCcEEEEecCCCeEEEEECCCCCCCCeE------Ee-------CCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCC
Q psy6446 28 FATDSYRLATGSNDKNIRIYDLNKPDAEPTV------YR-------GHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSA 94 (134)
Q Consensus 28 ~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~------~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 94 (134)
+..+++++++-+.+|.+++||+.+.+..... +. .....|..+.++.+|.-+++-+ +|....|+..-
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L 96 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL 96 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence 3446888999999999999999986533221 11 3456788888888888777655 46778887654
Q ss_pred Cce
Q psy6446 95 SAE 97 (134)
Q Consensus 95 ~~~ 97 (134)
+.-
T Consensus 97 ~~W 99 (219)
T PF07569_consen 97 GCW 99 (219)
T ss_pred cee
Confidence 433
No 377
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=96.98 E-value=0.047 Score=35.85 Aligned_cols=87 Identities=9% Similarity=0.110 Sum_probs=57.2
Q ss_pred EeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee-C-----------------CCE
Q psy6446 16 FQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK-N-----------------NTR 77 (134)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-----------------~~~ 77 (134)
+........++..+|++++.++...-|.|.++|+..+. ..++.++.+..-...-..+ . ..+
T Consensus 303 l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~-vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~ 381 (415)
T PF14655_consen 303 LPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGI-VVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALF 381 (415)
T ss_pred eccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCCh-hhhhhccCccceEEEEEeecccccccccccccCCCCcceEE
Confidence 33344445559999999999998888999999998855 4456676654322211111 1 112
Q ss_pred E-EEeeCCCcEEEEecCCCceeEEEec
Q psy6446 78 L-ISCAEDKTVRLWDVSASAEVQKLEF 103 (134)
Q Consensus 78 l-~~~~~d~~i~~~d~~~~~~~~~~~~ 103 (134)
| +-.-..|.|.+|+++++..+..+..
T Consensus 382 LvIyaprRg~lEvW~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 382 LVIYAPRRGILEVWSMRQGPRVAAFNV 408 (415)
T ss_pred EEEEeccCCeEEEEecCCCCEEEEEEe
Confidence 2 2345678899999999988876653
No 378
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=96.98 E-value=0.046 Score=35.75 Aligned_cols=132 Identities=15% Similarity=0.085 Sum_probs=71.1
Q ss_pred CeeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCC-----------CeEEEEECCCCCCC-CeEEeCCCCC--E
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSND-----------KNIRIYDLNKPDAE-PTVYRGHSSG--I 66 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----------~~v~i~~~~~~~~~-~~~~~~~~~~--v 66 (134)
+++++|+.+|+.+...-......+ +.|.++++.|+....+ ..|+.|.+.+.... ...+.+.... .
T Consensus 151 ~l~v~Dl~tg~~l~d~i~~~~~~~-~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~ 229 (414)
T PF02897_consen 151 TLRVFDLETGKFLPDGIENPKFSS-VSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWF 229 (414)
T ss_dssp EEEEEETTTTEEEEEEEEEEESEE-EEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSE
T ss_pred EEEEEECCCCcCcCCcccccccce-EEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEE
Confidence 378999999987653211112223 9999998877655432 24788888775433 2234443333 5
Q ss_pred eEEEEeeCCCEEEEeeC---C-CcEEEEecCCC-----ceeEEEecCCCCeEEEEccCCcEEEEe-c---CCeEEEEeCC
Q psy6446 67 KHVQFFKNNTRLISCAE---D-KTVRLWDVSAS-----AEVQKLEFGAVPNSLEISRDGTTITVT-H---GSCVTFLDAN 133 (134)
Q Consensus 67 ~~~~~~~~~~~l~~~~~---d-~~i~~~d~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~-~---~~~i~i~d~~ 133 (134)
..+..++++++++.... + ..+.+.|+..+ ...........+....-+..+.+++.+ . .+.|...++.
T Consensus 230 ~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~ 309 (414)
T PF02897_consen 230 VSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVDHHGDRLYILTNDDAPNGRLVAVDLA 309 (414)
T ss_dssp EEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEEEETTEEEEEE-TT-TT-EEEEEETT
T ss_pred EEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEEccCCEEEEeeCCCCCCcEEEEeccc
Confidence 67888999999774332 2 35788888764 233333333333333323344444433 2 2566555543
No 379
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=96.96 E-value=0.042 Score=34.96 Aligned_cols=49 Identities=16% Similarity=0.338 Sum_probs=39.6
Q ss_pred cEEEEecCCCceeEEEecCCCCeEEEEccCCc-EEE-Ee-cCCeEEEEeCCC
Q psy6446 86 TVRLWDVSASAEVQKLEFGAVPNSLEISRDGT-TIT-VT-HGSCVTFLDANS 134 (134)
Q Consensus 86 ~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~-~~-~~~~i~i~d~~t 134 (134)
.|.++|+.+++.+..+..+.++.++..+.+.+ +|+ .. .++.+.+||..|
T Consensus 270 eVWv~D~~t~krv~Ri~l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~t 321 (342)
T PF06433_consen 270 EVWVYDLKTHKRVARIPLEHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAAT 321 (342)
T ss_dssp EEEEEETTTTEEEEEEEEEEEESEEEEESSSS-EEEEEETTTTEEEEEETTT
T ss_pred EEEEEECCCCeEEEEEeCCCccceEEEccCCCcEEEEEcCCCCeEEEEeCcC
Confidence 47788999999999998878888999998874 554 34 468999999864
No 380
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=96.95 E-value=0.035 Score=33.87 Aligned_cols=109 Identities=12% Similarity=0.109 Sum_probs=63.2
Q ss_pred CCceeeEEEccCC-cEEEEecCCCeEEEEECCCCCCCCeEEeC-CCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCc-
Q psy6446 20 HIVKSSVHFATDS-YRLATGSNDKNIRIYDLNKPDAEPTVYRG-HSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASA- 96 (134)
Q Consensus 20 ~~~~~~~~~~~~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~- 96 (134)
..-++.++|+|+. .++++....+.|..++.+ ++.. +...- --+..-.+++..++.++++.-+++.+.++++....
T Consensus 21 ~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vl-r~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~ 98 (248)
T PF06977_consen 21 LDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVL-RRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTT 98 (248)
T ss_dssp -S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EE-EEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE----T
T ss_pred cCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEE-EEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEecccc
Confidence 3346679999964 566777778888888865 3433 33322 23568889998788777776678889999884321
Q ss_pred -----eeEEEe------cCCCCeEEEEccCCcEEEEe-cCCeEEEE
Q psy6446 97 -----EVQKLE------FGAVPNSLEISRDGTTITVT-HGSCVTFL 130 (134)
Q Consensus 97 -----~~~~~~------~~~~v~~~~~~~~~~~l~~~-~~~~i~i~ 130 (134)
....+. ....+..++|+|.+..+++. ...-..+|
T Consensus 99 ~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~ 144 (248)
T PF06977_consen 99 SLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLY 144 (248)
T ss_dssp T--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEE
T ss_pred ccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhE
Confidence 112222 12447899999987555544 43333344
No 381
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=96.91 E-value=0.04 Score=38.77 Aligned_cols=69 Identities=4% Similarity=0.059 Sum_probs=45.9
Q ss_pred CCEeEEEEeeCCCEEEEeeCCCcEEEEecCC----------Cce--e-EEEe---------cCCCCeEEEEccCC---c-
Q psy6446 64 SGIKHVQFFKNNTRLISCAEDKTVRLWDVSA----------SAE--V-QKLE---------FGAVPNSLEISRDG---T- 117 (134)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~----------~~~--~-~~~~---------~~~~v~~~~~~~~~---~- 117 (134)
-.|..+.++|+|..++..|..+. .|..+.. ++. . +... ....|..+.|+|.+ .
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~v-~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~ 163 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRGV-VVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH 163 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCcE-EEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence 36889999999999998888664 3333321 111 1 1111 12467899999964 4
Q ss_pred EEEEecCCeEEEEeCC
Q psy6446 118 TITVTHGSCVTFLDAN 133 (134)
Q Consensus 118 ~l~~~~~~~i~i~d~~ 133 (134)
+++..+|+.+++||+.
T Consensus 164 l~vLtsdn~lR~y~~~ 179 (717)
T PF10168_consen 164 LVVLTSDNTLRLYDIS 179 (717)
T ss_pred EEEEecCCEEEEEecC
Confidence 4556899999999984
No 382
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=96.89 E-value=0.064 Score=36.12 Aligned_cols=127 Identities=14% Similarity=0.179 Sum_probs=75.9
Q ss_pred eEeecCCCceeeEEeeCCCceeeEEEccCCc-------EEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEe---
Q psy6446 3 TVWDAVSGEELHSFQHPHIVKSSVHFATDSY-------RLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFF--- 72 (134)
Q Consensus 3 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~--- 72 (134)
+-.|++.|+.+.....+..+ - +.|.|+.+ .-++|-.+..|.-.|.+-....... .....-++.-.|+
T Consensus 493 ykmDIErGkvveeW~~~ddv-v-Vqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v-~esKdY~tKn~Fss~~ 569 (776)
T COG5167 493 YKMDIERGKVVEEWDLKDDV-V-VQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKV-VESKDYKTKNKFSSGM 569 (776)
T ss_pred eeeecccceeeeEeecCCcc-e-eecCCchhHHhcCccceEEeecccceEEecccccCCceee-eeehhccccccccccc
Confidence 34566777777777644444 2 66776432 2344555555665666543321111 1111222222232
Q ss_pred -eCCCEEEEeeCCCcEEEEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEecCCeEEEEeC
Q psy6446 73 -KNNTRLISCAEDKTVRLWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 73 -~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~ 132 (134)
-...+++.+++.|.|++||--.-+....++ .+..|..+....+|.+++++....+.+-|+
T Consensus 570 tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~yllL~d~ 631 (776)
T COG5167 570 TTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKNYLLLTDV 631 (776)
T ss_pred cccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecceEEEEec
Confidence 245689999999999999965444333343 467888999999999988876666666665
No 383
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.88 E-value=0.0081 Score=25.93 Aligned_cols=31 Identities=13% Similarity=0.201 Sum_probs=24.8
Q ss_pred CCEeEEEEeeCC---CEEEEeeCCCcEEEEecCC
Q psy6446 64 SGIKHVQFFKNN---TRLISCAEDKTVRLWDVSA 94 (134)
Q Consensus 64 ~~v~~~~~~~~~---~~l~~~~~d~~i~~~d~~~ 94 (134)
+.+.+++|+|+. ..|+..-..+.+.++|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 468899999844 4777777778999999985
No 384
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=96.85 E-value=0.037 Score=32.78 Aligned_cols=100 Identities=12% Similarity=0.235 Sum_probs=61.3
Q ss_pred cEEEEecCCCeEEEEECCCCC-CCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCC------cEEEE---ecC--CCce---
Q psy6446 33 YRLATGSNDKNIRIYDLNKPD-AEPTVYRGHSSGIKHVQFFKNNTRLISCAEDK------TVRLW---DVS--ASAE--- 97 (134)
Q Consensus 33 ~~l~~~~~d~~v~i~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~~~---d~~--~~~~--- 97 (134)
..|+.+...+.|.+|++.... .+...+. --+.|..+.++..|++++|--.+. .+++| ... ...+
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~-Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~v 107 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFS-TVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRV 107 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEc-chhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEE
Confidence 445444556789999998433 3333333 347899999999999999854332 45555 111 0111
Q ss_pred --------------------eEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 98 --------------------VQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 98 --------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
+-.++...++.+++-.|..--|+.+.++.+.+|.++
T Consensus 108 RiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~~~~l~lf~l~ 163 (215)
T PF14761_consen 108 RIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGCGNKLVLFTLK 163 (215)
T ss_pred EEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEcCCEEEEEEEE
Confidence 111223456778888886656666667888888653
No 385
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=96.85 E-value=0.071 Score=35.87 Aligned_cols=127 Identities=10% Similarity=0.010 Sum_probs=71.2
Q ss_pred eeEeecCCCceeeEEeeCCC------ceeeEEEc----cCCc---EEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeE
Q psy6446 2 GTVWDAVSGEELHSFQHPHI------VKSSVHFA----TDSY---RLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKH 68 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~------~~~~~~~~----~~~~---~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~ 68 (134)
|.-.|..+|+.+..++.... ........ -++. .++.++.+|.+...|.++++..-..... ...
T Consensus 258 l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~----~~~ 333 (488)
T cd00216 258 IVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEV----EQP 333 (488)
T ss_pred EEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEee----ccc
Confidence 56678899999988762211 11101111 1333 5778889999999999998754332111 011
Q ss_pred EEEeeCCCEEEE------------------eeCCCcEEEEecCCCceeEEEecC---------CCCeEEEEccCCcEEEE
Q psy6446 69 VQFFKNNTRLIS------------------CAEDKTVRLWDVSASAEVQKLEFG---------AVPNSLEISRDGTTITV 121 (134)
Q Consensus 69 ~~~~~~~~~l~~------------------~~~d~~i~~~d~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~ 121 (134)
+...| ..++. ...++.+.-.|..+++.+...... .+...-.....+..+++
T Consensus 334 ~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~ 411 (488)
T cd00216 334 MAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFA 411 (488)
T ss_pred cccCC--ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEE
Confidence 22232 22222 124577888899999888776643 11111111123344554
Q ss_pred -ecCCeEEEEeCCC
Q psy6446 122 -THGSCVTFLDANS 134 (134)
Q Consensus 122 -~~~~~i~i~d~~t 134 (134)
+.+|.|+.+|.+|
T Consensus 412 g~~dG~l~ald~~t 425 (488)
T cd00216 412 GAADGYFRAFDATT 425 (488)
T ss_pred ECCCCeEEEEECCC
Confidence 4689999888754
No 386
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=96.81 E-value=0.047 Score=33.39 Aligned_cols=104 Identities=15% Similarity=0.163 Sum_probs=62.0
Q ss_pred eeeEEEccCCcEEEEec---CCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEe-cCCCcee
Q psy6446 23 KSSVHFATDSYRLATGS---NDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWD-VSASAEV 98 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~~---~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d-~~~~~~~ 98 (134)
....+++++++.++... ....++++... ....... ....+....|.+++........+...+++. ...+...
T Consensus 26 ~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~--~~~~~~~--~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~ 101 (253)
T PF10647_consen 26 VTSPAVSPDGSRVAAVSEGDGGRSLYVGPAG--GPVRPVL--TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGE 101 (253)
T ss_pred ccceEECCCCCeEEEEEEcCCCCEEEEEcCC--Ccceeec--cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcce
Confidence 34499999999877655 33345555443 3232222 234788889999976666656565566663 2333222
Q ss_pred -EEEec---CCCCeEEEEccCCcEEEEe----cCCeEEEE
Q psy6446 99 -QKLEF---GAVPNSLEISRDGTTITVT----HGSCVTFL 130 (134)
Q Consensus 99 -~~~~~---~~~v~~~~~~~~~~~l~~~----~~~~i~i~ 130 (134)
..... ...|..+.++|||..++.- .+++|.+-
T Consensus 102 ~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va 141 (253)
T PF10647_consen 102 PVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVA 141 (253)
T ss_pred eEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEE
Confidence 12221 1279999999999876642 24666653
No 387
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.80 E-value=0.053 Score=33.75 Aligned_cols=110 Identities=17% Similarity=0.193 Sum_probs=67.5
Q ss_pred CceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeE-EeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeE
Q psy6446 21 IVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTV-YRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQ 99 (134)
Q Consensus 21 ~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 99 (134)
.-++++.|+|+.+.|++..+...-.++--.++..+..+ +.+ -...-.+.+..++++.++--.++.+.++.+.......
T Consensus 86 ~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g-~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~~~ 164 (316)
T COG3204 86 ANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTG-FSDPETIEYIGGNQFVIVDERDRALYLFTVDADTTVI 164 (316)
T ss_pred ccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccc-cCChhHeEEecCCEEEEEehhcceEEEEEEcCCccEE
Confidence 33667999999998888877666555544444433222 112 2334567777788888877778888888766543221
Q ss_pred -----EEec------CCCCeEEEEccCCcEEEEe-cCCeEEEEe
Q psy6446 100 -----KLEF------GAVPNSLEISRDGTTITVT-HGSCVTFLD 131 (134)
Q Consensus 100 -----~~~~------~~~v~~~~~~~~~~~l~~~-~~~~i~i~d 131 (134)
.++. ......++|+|..+.+... .-.-+.||.
T Consensus 165 ~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~ 208 (316)
T COG3204 165 SAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFE 208 (316)
T ss_pred eccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEE
Confidence 1221 2345789999988766655 334444443
No 388
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=96.74 E-value=0.033 Score=30.48 Aligned_cols=105 Identities=12% Similarity=0.111 Sum_probs=64.7
Q ss_pred EEEccCCcEEEEecCCCeEEEEECCCCCC-------CCeEEeCCCCCEeEEEEee----C-CCEEEEeeCCCcEEEEecC
Q psy6446 26 VHFATDSYRLATGSNDKNIRIYDLNKPDA-------EPTVYRGHSSGIKHVQFFK----N-NTRLISCAEDKTVRLWDVS 93 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~d~~v~i~~~~~~~~-------~~~~~~~~~~~v~~~~~~~----~-~~~l~~~~~d~~i~~~d~~ 93 (134)
-.|......|++++.-|+|.+++...... .... ..-...|++++-.+ + ...|+.| ....+..||+.
T Consensus 4 GkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~-LNin~~italaaG~l~~~~~~D~LliG-t~t~llaYDV~ 81 (136)
T PF14781_consen 4 GKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISF-LNINQEITALAAGRLKPDDGRDCLLIG-TQTSLLAYDVE 81 (136)
T ss_pred EEeCCCceeEEEEecCCEEEEECCCccccccccccCceeE-EECCCceEEEEEEecCCCCCcCEEEEe-ccceEEEEEcc
Confidence 45666666788888889999998764321 1122 23445677776544 2 3344444 45579999998
Q ss_pred CCceeEEEecCCCCeEEEEcc----CCcEEEEecCCeEEEEeC
Q psy6446 94 ASAEVQKLEFGAVPNSLEISR----DGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 94 ~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~~~i~i~d~ 132 (134)
....+.....+..++++.+-. +.+++++|++..|.-||.
T Consensus 82 ~N~d~Fyke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~ 124 (136)
T PF14781_consen 82 NNSDLFYKEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDY 124 (136)
T ss_pred cCchhhhhhCccceeEEEEEecCCCCCcEEEECceEEEEEeCC
Confidence 877666555566677776632 345666665555555543
No 389
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.72 E-value=0.063 Score=33.44 Aligned_cols=113 Identities=16% Similarity=0.246 Sum_probs=68.6
Q ss_pred CCceeeEEeeCCCceeeEEEccCC-cEEEEecCCCe-EEEEECCCCCCCCeEEeCCCC--CEeEEEEeeCCCEEEEeeCC
Q psy6446 9 SGEELHSFQHPHIVKSSVHFATDS-YRLATGSNDKN-IRIYDLNKPDAEPTVYRGHSS--GIKHVQFFKNNTRLISCAED 84 (134)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~-v~i~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d 84 (134)
.|+++....-+...-. +.++|.. .-++.+-.-|+ ..++|.+....+. .....++ -.-.-.|||||.+|...-+|
T Consensus 57 aGk~v~~~~lpaR~Hg-i~~~p~~~ravafARrPGtf~~vfD~~~~~~pv-~~~s~~~RHfyGHGvfs~dG~~LYATEnd 134 (366)
T COG3490 57 AGKIVFATALPARGHG-IAFHPALPRAVAFARRPGTFAMVFDPNGAQEPV-TLVSQEGRHFYGHGVFSPDGRLLYATEND 134 (366)
T ss_pred CCceeeeeecccccCC-eecCCCCcceEEEEecCCceEEEECCCCCcCcE-EEecccCceeecccccCCCCcEEEeecCC
Confidence 3556555554444444 7788843 44555555554 4678887765543 2222221 22334689999999865443
Q ss_pred -----CcEEEEecCCC-ceeEEEe-cCCCCeEEEEccCCcEEEEec
Q psy6446 85 -----KTVRLWDVSAS-AEVQKLE-FGAVPNSLEISRDGTTITVTH 123 (134)
Q Consensus 85 -----~~i~~~d~~~~-~~~~~~~-~~~~v~~~~~~~~~~~l~~~~ 123 (134)
|.|-+||.+.+ +.+..+. +.-....+.+.+||+.++...
T Consensus 135 fd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan 180 (366)
T COG3490 135 FDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN 180 (366)
T ss_pred CCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeC
Confidence 67999998743 2233333 345567899999999888753
No 390
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=96.68 E-value=0.07 Score=33.57 Aligned_cols=107 Identities=12% Similarity=0.065 Sum_probs=57.1
Q ss_pred CceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCC-CceeE
Q psy6446 21 IVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSA-SAEVQ 99 (134)
Q Consensus 21 ~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~-~~~~~ 99 (134)
..+..+.-+++|+++++++.-....-|+.....- ....+.....+..|.|.|++...+. .+.|.++.-+... .....
T Consensus 145 gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w-~~~~r~~~~riq~~gf~~~~~lw~~-~~Gg~~~~s~~~~~~~~w~ 222 (302)
T PF14870_consen 145 GSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTW-QPHNRNSSRRIQSMGFSPDGNLWML-ARGGQIQFSDDPDDGETWS 222 (302)
T ss_dssp --EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS--EEEE--SSS-EEEEEE-TTS-EEEE-ETTTEEEEEE-TTEEEEE-
T ss_pred ceeEeEEECCCCcEEEEECcccEEEEecCCCccc-eEEccCccceehhceecCCCCEEEE-eCCcEEEEccCCCCccccc
Confidence 3444477788999888887655555677543211 1122334678999999999776554 4778888777222 22111
Q ss_pred E--Ee---cCCCCeEEEEccCCcEEEEecCCeEEE
Q psy6446 100 K--LE---FGAVPNSLEISRDGTTITVTHGSCVTF 129 (134)
Q Consensus 100 ~--~~---~~~~v~~~~~~~~~~~l~~~~~~~i~i 129 (134)
. .+ ....+..++|.+++...+++.+|.+..
T Consensus 223 ~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G~l~~ 257 (302)
T PF14870_consen 223 EPIIPIKTNGYGILDLAYRPPNEIWAVGGSGTLLV 257 (302)
T ss_dssp --B-TTSS--S-EEEEEESSSS-EEEEESTT-EEE
T ss_pred cccCCcccCceeeEEEEecCCCCEEEEeCCccEEE
Confidence 1 11 122367889999988888887776543
No 391
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=96.63 E-value=0.11 Score=35.53 Aligned_cols=109 Identities=11% Similarity=0.079 Sum_probs=66.3
Q ss_pred eeEEEccC----CcEEEEecCCCeEEEEECCCCC----CCCeEEeC-C----CCCEeEEEEeeCCCEEEEeeCCCcEEEE
Q psy6446 24 SSVHFATD----SYRLATGSNDKNIRIYDLNKPD----AEPTVYRG-H----SSGIKHVQFFKNNTRLISCAEDKTVRLW 90 (134)
Q Consensus 24 ~~~~~~~~----~~~l~~~~~d~~v~i~~~~~~~----~~~~~~~~-~----~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 90 (134)
..+.|.|- ...+++......|.+|.+.... +....... . .--....-|+|....|+.-..+..-.++
T Consensus 60 ~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~ 139 (671)
T PF15390_consen 60 HGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLP 139 (671)
T ss_pred eeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEee
Confidence 34888884 3345555667889999986321 11111111 1 1123567799988887665554444455
Q ss_pred ecC--CCceeEEEecCCCCeEEEEccCCcEEEEe--cCCeEEEEeC
Q psy6446 91 DVS--ASAEVQKLEFGAVPNSLEISRDGTTITVT--HGSCVTFLDA 132 (134)
Q Consensus 91 d~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~ 132 (134)
+.+ +.+....+...+.|.|.+|.+||+.++++ +.=.-++||-
T Consensus 140 sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~ 185 (671)
T PF15390_consen 140 SVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDS 185 (671)
T ss_pred eeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecC
Confidence 554 33444556677889999999999887765 3346677773
No 392
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=96.62 E-value=0.081 Score=33.41 Aligned_cols=70 Identities=20% Similarity=0.186 Sum_probs=43.5
Q ss_pred CCEeEEEEeeCCCEEEEeeC------C---CcEEEEecC-CCceeEEEec-CCCCeEEEEccCCcEEEEe--cCCeEEEE
Q psy6446 64 SGIKHVQFFKNNTRLISCAE------D---KTVRLWDVS-ASAEVQKLEF-GAVPNSLEISRDGTTITVT--HGSCVTFL 130 (134)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~------d---~~i~~~d~~-~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~--~~~~i~i~ 130 (134)
...+.....|+|.+.++-.. . ..-.+|-+. .+...+.... -...+.++||||++.+..+ ..+.|+.|
T Consensus 111 ~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~ 190 (307)
T COG3386 111 NRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRY 190 (307)
T ss_pred CCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEE
Confidence 34567888888887764333 1 112344444 3444444433 3455899999999877765 34888888
Q ss_pred eCC
Q psy6446 131 DAN 133 (134)
Q Consensus 131 d~~ 133 (134)
++.
T Consensus 191 ~~d 193 (307)
T COG3386 191 DLD 193 (307)
T ss_pred ecC
Confidence 763
No 393
>KOG4460|consensus
Probab=96.60 E-value=0.11 Score=35.07 Aligned_cols=69 Identities=3% Similarity=-0.032 Sum_probs=45.8
Q ss_pred CEeEEEEeeCCCEEEEeeCCCcEEEEe---------cCCCceeEEEe------------cCCCCeEEEEccCC----cEE
Q psy6446 65 GIKHVQFFKNNTRLISCAEDKTVRLWD---------VSASAEVQKLE------------FGAVPNSLEISRDG----TTI 119 (134)
Q Consensus 65 ~v~~~~~~~~~~~l~~~~~d~~i~~~d---------~~~~~~~~~~~------------~~~~v~~~~~~~~~----~~l 119 (134)
.|..+..++.|..++..+.+|.+.++= +.+++..-... ..-.+..++|+|+. .++
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~ 184 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLV 184 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEE
Confidence 467788889999999888888655442 12333222111 11235678899976 455
Q ss_pred EEecCCeEEEEeCC
Q psy6446 120 TVTHGSCVTFLDAN 133 (134)
Q Consensus 120 ~~~~~~~i~i~d~~ 133 (134)
+..+|+.|++||..
T Consensus 185 iL~sdnviRiy~lS 198 (741)
T KOG4460|consen 185 LLTSDNVIRIYSLS 198 (741)
T ss_pred EEecCcEEEEEecC
Confidence 56899999999974
No 394
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=96.49 E-value=0.046 Score=37.20 Aligned_cols=71 Identities=14% Similarity=0.241 Sum_probs=43.1
Q ss_pred CCcEEEEecCCCeEEEEECCC---CCCCCe--EEe--------------------CCCCCEeEEEEee----CCCEEEEe
Q psy6446 31 DSYRLATGSNDKNIRIYDLNK---PDAEPT--VYR--------------------GHSSGIKHVQFFK----NNTRLISC 81 (134)
Q Consensus 31 ~~~~l~~~~~d~~v~i~~~~~---~~~~~~--~~~--------------------~~~~~v~~~~~~~----~~~~l~~~ 81 (134)
+...++.+..||.+....... ...... .+. .....+...+++. +..++++.
T Consensus 157 ~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~tl 236 (547)
T PF11715_consen 157 SEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFTL 236 (547)
T ss_dssp SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEEE
T ss_pred CCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEEE
Confidence 666777778888777776554 110000 000 0123455566665 77899999
Q ss_pred eCCCcEEEEecCCCceeEEE
Q psy6446 82 AEDKTVRLWDVSASAEVQKL 101 (134)
Q Consensus 82 ~~d~~i~~~d~~~~~~~~~~ 101 (134)
+.|+.+++||+.+++++...
T Consensus 237 ~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 237 SRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp ETTSEEEEEETTTTCEEEEE
T ss_pred eCCCeEEEEECCCCeEEEEe
Confidence 99999999999999996554
No 395
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=96.48 E-value=0.15 Score=34.81 Aligned_cols=52 Identities=13% Similarity=0.093 Sum_probs=36.6
Q ss_pred eeEeecCCCceeeEEee--C--------CCceeeEEEccCCc---EEEEecCCCeEEEEECCCCCC
Q psy6446 2 GTVWDAVSGEELHSFQH--P--------HIVKSSVHFATDSY---RLATGSNDKNIRIYDLNKPDA 54 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~--~--------~~~~~~~~~~~~~~---~l~~~~~d~~v~i~~~~~~~~ 54 (134)
|.-.|++||+....++. + ...+- +....+|+ .++.+.++|.+++.|..+++.
T Consensus 273 ~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l-~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~ 337 (527)
T TIGR03075 273 IVARDPDTGKIKWHYQTTPHDEWDYDGVNEMIL-FDLKKDGKPRKLLAHADRNGFFYVLDRTNGKL 337 (527)
T ss_pred EEEEccccCCEEEeeeCCCCCCccccCCCCcEE-EEeccCCcEEEEEEEeCCCceEEEEECCCCce
Confidence 55678899999988872 1 11122 33334665 678899999999999988764
No 396
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=96.39 E-value=0.13 Score=35.73 Aligned_cols=89 Identities=13% Similarity=0.214 Sum_probs=57.1
Q ss_pred CeeEeecCCCceeeEEe--eCCCceeeEEEc--cCCcEEEEecCCCeEEEEECC-----CCCC---CCeE--EeCCC-CC
Q psy6446 1 MGTVWDAVSGEELHSFQ--HPHIVKSSVHFA--TDSYRLATGSNDKNIRIYDLN-----KPDA---EPTV--YRGHS-SG 65 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~l~~~~~d~~v~i~~~~-----~~~~---~~~~--~~~~~-~~ 65 (134)
++.|||...+.....-. ..+.+.. +.|. |+++.+++.+..+.|.++.-. ...+ .... ...+. .+
T Consensus 52 ~LtIWD~~~~~lE~~~~f~~~~~I~d-LDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~ 130 (631)
T PF12234_consen 52 ELTIWDTRSGVLEYEESFSEDDPIRD-LDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTPHP 130 (631)
T ss_pred EEEEEEcCCcEEEEeeeecCCCceee-ceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecCCCCC
Confidence 36899998887544333 3445544 8875 588888888888888887542 1111 1111 22333 67
Q ss_pred EeEEEEeeCCCEEEEeeCCCcEEEEec
Q psy6446 66 IKHVQFFKNNTRLISCAEDKTVRLWDV 92 (134)
Q Consensus 66 v~~~~~~~~~~~l~~~~~d~~i~~~d~ 92 (134)
|.+..|.++|..++.++ +.+.++|-
T Consensus 131 Igds~Wl~~G~LvV~sG--Nqlfv~dk 155 (631)
T PF12234_consen 131 IGDSIWLKDGTLVVGSG--NQLFVFDK 155 (631)
T ss_pred ccceeEecCCeEEEEeC--CEEEEECC
Confidence 89999999988776554 45777763
No 397
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=96.38 E-value=0.022 Score=24.11 Aligned_cols=41 Identities=20% Similarity=0.353 Sum_probs=29.5
Q ss_pred eCCCEEEEee-CCCcEEEEecCCCceeEEEecCCCCeEEEEc
Q psy6446 73 KNNTRLISCA-EDKTVRLWDVSASAEVQKLEFGAVPNSLEIS 113 (134)
Q Consensus 73 ~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~ 113 (134)
|++++|+.+. .++.|.++|..+++....+........+.|+
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~~ 42 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAVS 42 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEeC
Confidence 4677666544 5788999999988888887766555666553
No 398
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=96.24 E-value=0.2 Score=33.81 Aligned_cols=82 Identities=11% Similarity=0.036 Sum_probs=49.0
Q ss_pred CCCeEEEEECCCCCCCCeEEeC-CC------CCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeE--E
Q psy6446 40 NDKNIRIYDLNKPDAEPTVYRG-HS------SGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNS--L 110 (134)
Q Consensus 40 ~d~~v~i~~~~~~~~~~~~~~~-~~------~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~--~ 110 (134)
.+|.+.-.|+.+++..-..-.. +. .....-.....+..++.++.||.+..+|..+|+.+........+.. +
T Consensus 364 ~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~tG~~lW~~~~~~~~~a~P~ 443 (488)
T cd00216 364 GKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATTGKELWKFRTPSGIQATPM 443 (488)
T ss_pred CceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCCCceeeEEECCCCceEcCE
Confidence 3567777888776643322111 00 1111111122567888889999999999999999988876555422 3
Q ss_pred EEccCCcEEEE
Q psy6446 111 EISRDGTTITV 121 (134)
Q Consensus 111 ~~~~~~~~l~~ 121 (134)
.+..+++..+.
T Consensus 444 ~~~~~g~~yv~ 454 (488)
T cd00216 444 TYEVNGKQYVG 454 (488)
T ss_pred EEEeCCEEEEE
Confidence 34456654443
No 399
>PHA02713 hypothetical protein; Provisional
Probab=96.24 E-value=0.14 Score=35.21 Aligned_cols=60 Identities=8% Similarity=0.074 Sum_probs=31.6
Q ss_pred CCCEEEEeeCC------CcEEEEecCC-Ccee--EEEecCCCCeEEEEccCCcEEEEe-cCC--eEEEEeCCC
Q psy6446 74 NNTRLISCAED------KTVRLWDVSA-SAEV--QKLEFGAVPNSLEISRDGTTITVT-HGS--CVTFLDANS 134 (134)
Q Consensus 74 ~~~~l~~~~~d------~~i~~~d~~~-~~~~--~~~~~~~~v~~~~~~~~~~~l~~~-~~~--~i~i~d~~t 134 (134)
+++..+.|+.+ ..+..||..+ .+.. ..++......+++.. +++..++| .++ .+..||+.+
T Consensus 463 ~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~-~~~iyv~Gg~~~~~~~e~yd~~~ 534 (557)
T PHA02713 463 KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH-DNTIMMLHCYESYMLQDTFNVYT 534 (557)
T ss_pred CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE-CCEEEEEeeecceeehhhcCccc
Confidence 56666666653 2367888886 4433 223222222233332 55655554 455 677787754
No 400
>KOG1916|consensus
Probab=96.08 E-value=0.012 Score=41.80 Aligned_cols=66 Identities=17% Similarity=0.371 Sum_probs=45.7
Q ss_pred EEEcc---CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEE-----------EeeCCCEEEEeeCCCcEEEEe
Q psy6446 26 VHFAT---DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQ-----------FFKNNTRLISCAEDKTVRLWD 91 (134)
Q Consensus 26 ~~~~~---~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~-----------~~~~~~~l~~~~~d~~i~~~d 91 (134)
+.|.| +.-++..+-.++.+++...+.... ..+.+|...+..++ .+|||..++....||.++.|.
T Consensus 186 V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~--~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Q 263 (1283)
T KOG1916|consen 186 VSWCPIAVNKVYICYGLKGGEIRLLNINRALR--SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQ 263 (1283)
T ss_pred eeecccccccceeeeccCCCceeEeeechHHH--HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceee
Confidence 55554 566777888888999877665332 34555665554443 578999999999999888776
Q ss_pred cC
Q psy6446 92 VS 93 (134)
Q Consensus 92 ~~ 93 (134)
+.
T Consensus 264 iy 265 (1283)
T KOG1916|consen 264 IY 265 (1283)
T ss_pred ee
Confidence 53
No 401
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=96.02 E-value=0.31 Score=34.61 Aligned_cols=74 Identities=19% Similarity=0.214 Sum_probs=49.5
Q ss_pred eeeEEEccCCcEEEEecCCCeEEEEECCC---------CCCCC--eEE--------eCCCCCEeEEEEeeC---CCEEEE
Q psy6446 23 KSSVHFATDSYRLATGSNDKNIRIYDLNK---------PDAEP--TVY--------RGHSSGIKHVQFFKN---NTRLIS 80 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~d~~v~i~~~~~---------~~~~~--~~~--------~~~~~~v~~~~~~~~---~~~l~~ 80 (134)
+..+..+|+|.+++..+..|...+.=.+. ++... +.. ......|..+.|+|. +..|+.
T Consensus 87 v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l~v 166 (717)
T PF10168_consen 87 VHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHLVV 166 (717)
T ss_pred EEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeEEE
Confidence 34488899999999888866443332221 11100 010 133457899999995 588999
Q ss_pred eeCCCcEEEEecCCCc
Q psy6446 81 CAEDKTVRLWDVSASA 96 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~ 96 (134)
-..|+.+++||+....
T Consensus 167 Ltsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 167 LTSDNTLRLYDISDPQ 182 (717)
T ss_pred EecCCEEEEEecCCCC
Confidence 9999999999997543
No 402
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=95.95 E-value=0.14 Score=34.95 Aligned_cols=55 Identities=15% Similarity=0.225 Sum_probs=39.3
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCe
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPT 57 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~ 57 (134)
|.-+|+.+|+.+...+......... ..-.+..++.++.+|.++.+|.++++.+..
T Consensus 443 l~AiD~~tGk~~W~~~~~~p~~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~ 497 (527)
T TIGR03075 443 LIAWDPITGKIVWEHKEDFPLWGGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWK 497 (527)
T ss_pred EEEEeCCCCceeeEecCCCCCCCcc-eEECCcEEEEECCCCeEEEEECCCCCEeEE
Confidence 5678999999998887444333212 112456778888899999999999876543
No 403
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=95.92 E-value=0.25 Score=32.19 Aligned_cols=113 Identities=16% Similarity=0.125 Sum_probs=55.6
Q ss_pred eecCCCceeeEEeeCCC------ceeeEEEccCCcEEEEec-CCC--eEEEEECCCCCCCCeEEeCCC-CCEeEEEEeeC
Q psy6446 5 WDAVSGEELHSFQHPHI------VKSSVHFATDSYRLATGS-NDK--NIRIYDLNKPDAEPTVYRGHS-SGIKHVQFFKN 74 (134)
Q Consensus 5 ~d~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~-~d~--~v~i~~~~~~~~~~~~~~~~~-~~v~~~~~~~~ 74 (134)
-|..||..+..+..... ... =+|.++|+.|+.++ .+| ++++.|+.+++.. -+.... .......++|+
T Consensus 15 ~D~~TG~~VtrLT~~~~~~h~~YF~~-~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~--QLTdg~g~~~~g~~~s~~ 91 (386)
T PF14583_consen 15 IDPDTGHRVTRLTPPDGHSHRLYFYQ-NCFTDDGRKLLFASDFDGNRNLYLLDLATGEIT--QLTDGPGDNTFGGFLSPD 91 (386)
T ss_dssp E-TTT--EEEE-S-TTS-EE---TTS---B-TTS-EEEEEE-TTSS-EEEEEETTT-EEE--E---SS-B-TTT-EE-TT
T ss_pred eCCCCCceEEEecCCCCcccceeecC-CCcCCCCCEEEEEeccCCCcceEEEEcccCEEE--ECccCCCCCccceEEecC
Confidence 35677877777753322 223 55677887665544 444 6777777775432 233322 22345667888
Q ss_pred CCEEEEeeCCCcEEEEecCCCceeEEEecCCC-CeEEEEc--cCCcEEE
Q psy6446 75 NTRLISCAEDKTVRLWDVSASAEVQKLEFGAV-PNSLEIS--RDGTTIT 120 (134)
Q Consensus 75 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-v~~~~~~--~~~~~l~ 120 (134)
++.++-......+.-.|+.+.+....+..+.. .....|. .++..++
T Consensus 92 ~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~ 140 (386)
T PF14583_consen 92 DRALYYVKNGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLV 140 (386)
T ss_dssp SSEEEEEETTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEE
T ss_pred CCeEEEEECCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEE
Confidence 88887766667899999998876555554332 2234443 3455554
No 404
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=95.88 E-value=0.41 Score=34.32 Aligned_cols=108 Identities=19% Similarity=0.292 Sum_probs=65.0
Q ss_pred eeeEEEcc-CCcEEEEecCCCeEEEEECCCCC----CCCeEEeCCCC----------CEeEEEEeeCCCEEEEeeCCCcE
Q psy6446 23 KSSVHFAT-DSYRLATGSNDKNIRIYDLNKPD----AEPTVYRGHSS----------GIKHVQFFKNNTRLISCAEDKTV 87 (134)
Q Consensus 23 ~~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~----~~~~~~~~~~~----------~v~~~~~~~~~~~l~~~~~d~~i 87 (134)
..-++|+| +.+.||+....|...||++.... ........+.+ .-..+.|.++...|+.++.. .+
T Consensus 148 ~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r~-~l 226 (765)
T PF10214_consen 148 HADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNRS-KL 226 (765)
T ss_pred cceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcCC-ce
Confidence 33499999 66789999999999999992111 11111111222 23467788777777776654 57
Q ss_pred EEEecCCCceeEEE---ecCCCCeEEEEccCC--cEEEEecCCeEEEEeC
Q psy6446 88 RLWDVSASAEVQKL---EFGAVPNSLEISRDG--TTITVTHGSCVTFLDA 132 (134)
Q Consensus 88 ~~~d~~~~~~~~~~---~~~~~v~~~~~~~~~--~~l~~~~~~~i~i~d~ 132 (134)
.++|+.+......+ .....|..++-+|.. ..++.+ ...|...|+
T Consensus 227 ~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiLT-s~eiiw~~~ 275 (765)
T PF10214_consen 227 MLIDFESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFILT-SKEIIWLDV 275 (765)
T ss_pred EEEECCCCCccchhccCCChhheeeEEecCCccceEEEEe-cCeEEEEEc
Confidence 88998876553312 234567777777762 333322 245555444
No 405
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.86 E-value=0.19 Score=31.41 Aligned_cols=72 Identities=7% Similarity=0.203 Sum_probs=53.8
Q ss_pred CCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecC--CCCeEEEEccCCcEEEEe-cCCeEEEEeC
Q psy6446 61 GHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFG--AVPNSLEISRDGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 61 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~-~~~~i~i~d~ 132 (134)
+-...+.++.|+|+.+.|++......-.++=...|+.++.++.. .....+.+..+++++++. .++.+.++.+
T Consensus 83 g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~v 157 (316)
T COG3204 83 GETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTV 157 (316)
T ss_pred cccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEE
Confidence 44456999999999999998888887777766788999888753 344677777777777765 4566666543
No 406
>KOG4499|consensus
Probab=95.84 E-value=0.2 Score=30.44 Aligned_cols=98 Identities=11% Similarity=0.124 Sum_probs=64.0
Q ss_pred eCCCceeeEEEccCCcEEE-EecCCCeEEEEEC--CCCCCCC--eEE--eC----CCCCEeEEEEeeCCCEEEEeeCCCc
Q psy6446 18 HPHIVKSSVHFATDSYRLA-TGSNDKNIRIYDL--NKPDAEP--TVY--RG----HSSGIKHVQFFKNNTRLISCAEDKT 86 (134)
Q Consensus 18 ~~~~~~~~~~~~~~~~~l~-~~~~d~~v~i~~~--~~~~~~~--~~~--~~----~~~~v~~~~~~~~~~~l~~~~~d~~ 86 (134)
..-.+.+.++|+.+.+.+. +-+.+-.|.-||. .++.... ..+ +. .....-.++...+|...++.-..++
T Consensus 155 ~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~ 234 (310)
T KOG4499|consen 155 NCVGISNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGT 234 (310)
T ss_pred hhccCCccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcE
Confidence 3344555688988776664 4566777877774 3432111 111 11 1122345556667888888888999
Q ss_pred EEEEecCCCceeEEEecC-CCCeEEEEccC
Q psy6446 87 VRLWDVSASAEVQKLEFG-AVPNSLEISRD 115 (134)
Q Consensus 87 i~~~d~~~~~~~~~~~~~-~~v~~~~~~~~ 115 (134)
|...|..+|+.+..+..+ ..+++++|--.
T Consensus 235 V~~~dp~tGK~L~eiklPt~qitsccFgGk 264 (310)
T KOG4499|consen 235 VQKVDPTTGKILLEIKLPTPQITSCCFGGK 264 (310)
T ss_pred EEEECCCCCcEEEEEEcCCCceEEEEecCC
Confidence 999999999999988864 56889998643
No 407
>PRK10115 protease 2; Provisional
Probab=95.82 E-value=0.41 Score=33.87 Aligned_cols=107 Identities=14% Similarity=0.105 Sum_probs=63.5
Q ss_pred eeeEEEccCCcEEEEecC-----CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCC------CcEEEEe
Q psy6446 23 KSSVHFATDSYRLATGSN-----DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAED------KTVRLWD 91 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~-----d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~~~d 91 (134)
+..+.++|++++|+.+.. ...+++.|+.++......+.+- -..++|.+|++.++....+ ..+..++
T Consensus 129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~---~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~ 205 (686)
T PRK10115 129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNV---EPSFVWANDSWTFYYVRKHPVTLLPYQVWRHT 205 (686)
T ss_pred EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCc---ceEEEEeeCCCEEEEEEecCCCCCCCEEEEEE
Confidence 445789999998876533 2368889998765333322221 1569999999877654332 3577788
Q ss_pred cCCC--ceeEEEecCCC-Ce-EEEEccCCcEEEEe----cCCeEEEEeC
Q psy6446 92 VSAS--AEVQKLEFGAV-PN-SLEISRDGTTITVT----HGSCVTFLDA 132 (134)
Q Consensus 92 ~~~~--~~~~~~~~~~~-v~-~~~~~~~~~~l~~~----~~~~i~i~d~ 132 (134)
+.++ +....+..... .. ....+.++++++.. .++.+.+|+.
T Consensus 206 lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~ 254 (686)
T PRK10115 206 IGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDA 254 (686)
T ss_pred CCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEEC
Confidence 8877 33333332222 22 23334477766542 2467888874
No 408
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=95.78 E-value=0.3 Score=31.89 Aligned_cols=118 Identities=15% Similarity=0.176 Sum_probs=58.6
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEcc-CCcEEEEecC---CC-eEEEEECCCCCCCCeEEeCC--CCCEeEEEEeeC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFAT-DSYRLATGSN---DK-NIRIYDLNKPDAEPTVYRGH--SSGIKHVQFFKN 74 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~---d~-~v~i~~~~~~~~~~~~~~~~--~~~v~~~~~~~~ 74 (134)
|.--|+.+|+....++.....-. +.|+| +...|..+.. +. .-+||-+++.......+..+ ...+..=-|.||
T Consensus 170 i~~idl~tG~~~~v~~~~~wlgH-~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~D 248 (386)
T PF14583_consen 170 IFTIDLKTGERKVVFEDTDWLGH-VQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPD 248 (386)
T ss_dssp EEEEETTT--EEEEEEESS-EEE-EEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TT
T ss_pred EEEEECCCCceeEEEecCccccC-cccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCC
Confidence 44567888887666665554455 99999 4555555432 22 23667666543222222222 223555668899
Q ss_pred CCEEEEee-----CCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEE
Q psy6446 75 NTRLISCA-----EDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITV 121 (134)
Q Consensus 75 ~~~l~~~~-----~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 121 (134)
|..+.--+ .+..|.-+|+.+++.......+ ....+--++||.+++.
T Consensus 249 G~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~~p-~~~H~~ss~Dg~L~vG 299 (386)
T PF14583_consen 249 GSTIWYDSYTPGGQDFWIAGYDPDTGERRRLMEMP-WCSHFMSSPDGKLFVG 299 (386)
T ss_dssp SS-EEEEEEETTT--EEEEEE-TTT--EEEEEEE--SEEEEEE-TTSSEEEE
T ss_pred CCEEEEEeecCCCCceEEEeeCCCCCCceEEEeCC-ceeeeEEcCCCCEEEe
Confidence 98776422 2445777888887665433333 3334555788888876
No 409
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=95.78 E-value=0.26 Score=32.99 Aligned_cols=102 Identities=8% Similarity=0.082 Sum_probs=64.7
Q ss_pred CcEEEEecCCCeEEEE-ECCCCCCCCe----EEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCCC
Q psy6446 32 SYRLATGSNDKNIRIY-DLNKPDAEPT----VYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGAV 106 (134)
Q Consensus 32 ~~~l~~~~~d~~v~i~-~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 106 (134)
|..+.+++.||.|.-| |.+.+..+.. .++-...++..+.-..+.+-+++-+.+|++.++-....+.+.....-..
T Consensus 280 g~SLLv~~~dG~vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~~ 359 (733)
T COG4590 280 GFSLLVVHEDGLVSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQA 359 (733)
T ss_pred ceeEEEEcCCCceeeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhhhcC
Confidence 5568888999988766 4444332211 1111122333333233445677778888888886555554443333456
Q ss_pred CeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 107 PNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 107 v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
+.-++++|.+.+++.-..|.++++.++
T Consensus 360 ~~~~~~Sp~~~~Ll~e~~gki~~~~l~ 386 (733)
T COG4590 360 PQLVAMSPNQAYLLSEDQGKIRLAQLE 386 (733)
T ss_pred cceeeeCcccchheeecCCceEEEEec
Confidence 778999999999998888999998765
No 410
>KOG2247|consensus
Probab=95.76 E-value=0.00067 Score=44.48 Aligned_cols=111 Identities=11% Similarity=0.176 Sum_probs=72.6
Q ss_pred CceeeEEeeCCCceeeEEEccCCcEEEE-ecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEE
Q psy6446 10 GEELHSFQHPHIVKSSVHFATDSYRLAT-GSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVR 88 (134)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 88 (134)
++.......+...+. ++|..++..++. +-..+.+.+||+.+.......+ +-...-.-+.|++....++.+...+.+.
T Consensus 65 gq~~le~n~tg~ald-m~wDkegdvlavlAek~~piylwd~n~eytqqLE~-gg~~s~sll~wsKg~~el~ig~~~gn~v 142 (615)
T KOG2247|consen 65 GQVILELNPTGKALD-MAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLES-GGTSSKSLLAWSKGTPELVIGNNAGNIV 142 (615)
T ss_pred cceecccCCchhHhh-hhhccccchhhhhhhcCCCeeechhhhhhHHHHhc-cCcchHHHHhhccCCccccccccccceE
Confidence 344444444555566 888887776654 5567899999998643211111 1122223377888888888888888999
Q ss_pred EEecCCCceeEEEe-cCCCCeEEEEccCCcEEEEe
Q psy6446 89 LWDVSASAEVQKLE-FGAVPNSLEISRDGTTITVT 122 (134)
Q Consensus 89 ~~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~ 122 (134)
+++..+.+..-.+. +...+.++++.+.+..+..+
T Consensus 143 iynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil~d 177 (615)
T KOG2247|consen 143 IYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVILCD 177 (615)
T ss_pred EEeccchhhhhhhcccccceeEEEecccceeeecC
Confidence 99988766655555 55677888888877666544
No 411
>KOG3630|consensus
Probab=95.73 E-value=0.042 Score=40.20 Aligned_cols=96 Identities=10% Similarity=0.014 Sum_probs=65.1
Q ss_pred eeEEEccCC-cEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe
Q psy6446 24 SSVHFATDS-YRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE 102 (134)
Q Consensus 24 ~~~~~~~~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 102 (134)
.++.|+|.- ...++...|+.|++..+.........+ .-....++++|+|.|+.++.|...|++.-|... .+....++
T Consensus 159 ~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~-p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-leik~~ip 236 (1405)
T KOG3630|consen 159 LKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSF-PVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIKSEIP 236 (1405)
T ss_pred ccccccCCccchhhhhccccchhhhhhhhhhhhhccc-CcccceeeEEeccccceeeEecCCCeEEEeecc-cceeeccc
Confidence 347888843 234566778888887765433222221 234568999999999999999999999888543 33333333
Q ss_pred -----cCCCCeEEEEccCCcEEEE
Q psy6446 103 -----FGAVPNSLEISRDGTTITV 121 (134)
Q Consensus 103 -----~~~~v~~~~~~~~~~~l~~ 121 (134)
....|.+++|.....+++.
T Consensus 237 ~Pp~~e~yrvl~v~Wl~t~eflvv 260 (1405)
T KOG3630|consen 237 EPPVEENYRVLSVTWLSTQEFLVV 260 (1405)
T ss_pred CCCcCCCcceeEEEEecceeEEEE
Confidence 1367889999887777664
No 412
>KOG2377|consensus
Probab=95.66 E-value=0.38 Score=32.23 Aligned_cols=89 Identities=16% Similarity=0.109 Sum_probs=54.7
Q ss_pred EEEccCCcEEEEecCCCeEEEEECCCC--CCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe-
Q psy6446 26 VHFATDSYRLATGSNDKNIRIYDLNKP--DAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE- 102 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~d~~v~i~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~- 102 (134)
+.|. |.+..+.+...|.+.=|-.... ..+...-....++|.++.|++|.+.++....+.+|.+++....+......
T Consensus 28 vFfD-DaNkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~ 106 (657)
T KOG2377|consen 28 VFFD-DANKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQ 106 (657)
T ss_pred eeec-cCcceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHH
Confidence 4444 3333333333444555554332 23334444567899999999999999999999999999875443332222
Q ss_pred -c--C-CCCeEEEEccC
Q psy6446 103 -F--G-AVPNSLEISRD 115 (134)
Q Consensus 103 -~--~-~~v~~~~~~~~ 115 (134)
+ + ..|.+..|..+
T Consensus 107 ~ck~k~~~IlGF~W~~s 123 (657)
T KOG2377|consen 107 ECKTKNANILGFCWTSS 123 (657)
T ss_pred HhccCcceeEEEEEecC
Confidence 1 2 23677777755
No 413
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=95.55 E-value=0.4 Score=31.72 Aligned_cols=54 Identities=7% Similarity=0.118 Sum_probs=39.5
Q ss_pred CCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecC--CCCeEEEEccCC
Q psy6446 63 SSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFG--AVPNSLEISRDG 116 (134)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~--~~v~~~~~~~~~ 116 (134)
.+++..++.||++++++.-..+|.+.+....-.+....+..+ ..+..+.|.-+.
T Consensus 216 ~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~d 271 (410)
T PF04841_consen 216 DGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGND 271 (410)
T ss_pred CCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCC
Confidence 368999999999999999899999888876555555555433 455666666543
No 414
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=95.52 E-value=0.13 Score=26.13 Aligned_cols=52 Identities=15% Similarity=0.056 Sum_probs=35.2
Q ss_pred eeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEec--CCeEEEEeC
Q psy6446 81 CAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTH--GSCVTFLDA 132 (134)
Q Consensus 81 ~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~ 132 (134)
+..+|.+..||..+++....+..-...+.+++++|+.+++.+. ..+|.-|-+
T Consensus 33 ~~~~GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~Et~~~Ri~rywl 86 (89)
T PF03088_consen 33 GRPTGRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVAETGRYRILRYWL 86 (89)
T ss_dssp T---EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEEEGGGTEEEEEES
T ss_pred CCCCcCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEEeccCceEEEEEE
Confidence 3456778899998887666565555678999999999888764 356555543
No 415
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=95.37 E-value=0.23 Score=35.78 Aligned_cols=77 Identities=13% Similarity=0.133 Sum_probs=51.6
Q ss_pred eeEeecCCCceeeE-EeeCCCceeeEEEccCCcEEEE-ecCCC-----eEEEEECCCCCCCCeEEeCCCCCEeEEEEeeC
Q psy6446 2 GTVWDAVSGEELHS-FQHPHIVKSSVHFATDSYRLAT-GSNDK-----NIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKN 74 (134)
Q Consensus 2 i~v~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~-~~~d~-----~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 74 (134)
|.+-|.....+... ++....+.+ ..|||||+.++. .+..+ .|++-++++...-...+......|..-...++
T Consensus 331 L~~~D~dG~n~~~ve~~~~~~i~s-P~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aaiprwrv~e~ 409 (912)
T TIGR02171 331 LAYIDYTKGASRAVEIEDTISVYH-PDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAAIPRWRVLEN 409 (912)
T ss_pred EEEEecCCCCceEEEecCCCceec-CcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccccccceEecCC
Confidence 44556554444433 566667777 999999999987 44333 58888988765444455556677777777777
Q ss_pred CCEEE
Q psy6446 75 NTRLI 79 (134)
Q Consensus 75 ~~~l~ 79 (134)
|...+
T Consensus 410 gdt~i 414 (912)
T TIGR02171 410 GDTVI 414 (912)
T ss_pred CCeEE
Confidence 76544
No 416
>KOG3630|consensus
Probab=95.24 E-value=0.11 Score=38.30 Aligned_cols=106 Identities=10% Similarity=0.007 Sum_probs=66.3
Q ss_pred EEEccCCcEEEEe--cCCCeEEEEECCCCCCCC----eEE------eCCCCCEeEEEEeeCCC-EEEEeeCCCcEEEEec
Q psy6446 26 VHFATDSYRLATG--SNDKNIRIYDLNKPDAEP----TVY------RGHSSGIKHVQFFKNNT-RLISCAEDKTVRLWDV 92 (134)
Q Consensus 26 ~~~~~~~~~l~~~--~~d~~v~i~~~~~~~~~~----~~~------~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~ 92 (134)
+...+|+...++. +++-.|..||+++-.... ..+ ........++.|+|.-. ..+.+..|+.|++..+
T Consensus 106 ~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~ 185 (1405)
T KOG3630|consen 106 FVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKST 185 (1405)
T ss_pred EEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhh
Confidence 6666776655443 344478899987632211 111 12233456777887543 3456677888888766
Q ss_pred CCCc-eeEEEecCCCCeEEEEccCCcEEEEec-CCeEEEEe
Q psy6446 93 SASA-EVQKLEFGAVPNSLEISRDGTTITVTH-GSCVTFLD 131 (134)
Q Consensus 93 ~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d 131 (134)
.... ....++......+++|+|.|..+++|. .|++.-|-
T Consensus 186 ~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~ 226 (1405)
T KOG3630|consen 186 KQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYE 226 (1405)
T ss_pred hhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEee
Confidence 5322 223344566779999999999999984 58877664
No 417
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=95.20 E-value=0.24 Score=27.21 Aligned_cols=64 Identities=11% Similarity=0.146 Sum_probs=44.2
Q ss_pred EEeeCCCEEEEeeCCCcEEEEecCC--------CceeEEEecCCCCeEEEEcc-----CCcEEEEecCCeEEEEeCC
Q psy6446 70 QFFKNNTRLISCAEDKTVRLWDVSA--------SAEVQKLEFGAVPNSLEISR-----DGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 70 ~~~~~~~~l~~~~~d~~i~~~d~~~--------~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~~~i~i~d~~ 133 (134)
+|......|+.+..-+.|.+++... ...+..+.....|.+++-.+ +...|+.+....+..||++
T Consensus 5 kfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt~t~llaYDV~ 81 (136)
T PF14781_consen 5 KFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGTQTSLLAYDVE 81 (136)
T ss_pred EeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEeccceEEEEEcc
Confidence 4444445677777778888887653 33456666677777776433 2357888989999999985
No 418
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=95.16 E-value=0.46 Score=30.10 Aligned_cols=72 Identities=15% Similarity=0.204 Sum_probs=41.6
Q ss_pred eCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCce-eEEEecCCCCeEEEEccCCcEEEEecCCeEEEEe
Q psy6446 60 RGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAE-VQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLD 131 (134)
Q Consensus 60 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d 131 (134)
....+.+..+.-++++++++.+..-....-||.....- .........+..+.|.|++.+.+++..|.|+.=+
T Consensus 141 ~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~~Gg~~~~s~ 213 (302)
T PF14870_consen 141 SETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLARGGQIQFSD 213 (302)
T ss_dssp -S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEETTTEEEEEE
T ss_pred cCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEeCCcEEEEcc
Confidence 44456788888889999888877666677777543221 2222246789999999999887777778777643
No 419
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=95.09 E-value=0.57 Score=30.87 Aligned_cols=95 Identities=14% Similarity=0.234 Sum_probs=51.9
Q ss_pred EEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEe-----eCCCEEEEeeCCCcEEEEecCCCceeEEEecCC----
Q psy6446 35 LATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFF-----KNNTRLISCAEDKTVRLWDVSASAEVQKLEFGA---- 105 (134)
Q Consensus 35 l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~---- 105 (134)
++....+..++++...+.+.....+ ...-....+.+- ..+..|++-..+|.++++.+..-+.+.......
T Consensus 228 ~vVvvSe~~irv~~~~~~k~~~K~~-~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~ 306 (395)
T PF08596_consen 228 YVVVVSESDIRVFKPPKSKGAHKSF-DDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDS 306 (395)
T ss_dssp EEEEE-SSEEEEE-TT---EEEEE--SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---H
T ss_pred EEEEEcccceEEEeCCCCcccceee-ccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCcccc
Confidence 3333446789999887755443333 221223334442 256678888999999999999988888777532
Q ss_pred -CCeEEEEccCCcEEEEecCCeEEEE
Q psy6446 106 -VPNSLEISRDGTTITVTHGSCVTFL 130 (134)
Q Consensus 106 -~v~~~~~~~~~~~l~~~~~~~i~i~ 130 (134)
......++++|..+...+...+.++
T Consensus 307 ~~~~~ssis~~Gdi~~~~gpsE~~l~ 332 (395)
T PF08596_consen 307 RRLSSSSISRNGDIFYWTGPSEIQLF 332 (395)
T ss_dssp HHHTT-EE-TTS-EEEE-SSSEEEEE
T ss_pred ccccccEECCCCCEEEEeCcccEEEE
Confidence 2456777899987776555444433
No 420
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=95.04 E-value=0.1 Score=21.94 Aligned_cols=40 Identities=25% Similarity=0.274 Sum_probs=22.1
Q ss_pred CceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCC
Q psy6446 10 GEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNK 51 (134)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~ 51 (134)
|+.+.+++........+.. .+..++.++.||.++.+|.++
T Consensus 1 G~~~W~~~~~~~~~~~~~v--~~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 1 GKVLWSYDTGGPIWSSPAV--AGGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp S-EEEEEE-SS---S--EE--CTSEEEEE-TTSEEEEEETT-
T ss_pred CceeEEEECCCCcCcCCEE--ECCEEEEEcCCCEEEEEeCCC
Confidence 3455566644444443444 466888999999999998753
No 421
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=94.84 E-value=0.95 Score=32.17 Aligned_cols=102 Identities=11% Similarity=0.082 Sum_probs=63.4
Q ss_pred CCcEEEEecCCCeEEEEECCC-------C----CC-------CCeEEeCCCCCEeEEEEe--eCCCEEEEeeCCCcEEEE
Q psy6446 31 DSYRLATGSNDKNIRIYDLNK-------P----DA-------EPTVYRGHSSGIKHVQFF--KNNTRLISCAEDKTVRLW 90 (134)
Q Consensus 31 ~~~~l~~~~~d~~v~i~~~~~-------~----~~-------~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~~~ 90 (134)
+...|+.+..||.|.+|.... . .. ...........+.+++++ ...+.++.++....|.||
T Consensus 113 ~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVF 192 (717)
T PF08728_consen 113 GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVF 192 (717)
T ss_pred CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEecCCceEEEE
Confidence 345688899999999996521 0 00 011112234578889988 667777777777778877
Q ss_pred ecCCC--ce--eEEEecCCCCeEEEEccCC-----c-EEEEe-cCCeEEEEeC
Q psy6446 91 DVSAS--AE--VQKLEFGAVPNSLEISRDG-----T-TITVT-HGSCVTFLDA 132 (134)
Q Consensus 91 d~~~~--~~--~~~~~~~~~v~~~~~~~~~-----~-~l~~~-~~~~i~i~d~ 132 (134)
-.... +. .....+...|.+++|-++. . .++++ -.|.+.+|++
T Consensus 193 af~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 193 AFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 65432 11 1122356678999997754 2 44433 4688888876
No 422
>KOG4441|consensus
Probab=94.82 E-value=0.87 Score=31.61 Aligned_cols=129 Identities=11% Similarity=0.047 Sum_probs=63.5
Q ss_pred eeEeecCCCceeeEEe--eCCCceeeEEEccCCcEEEEecCC-C-----eEEEEECCCCCCCCeEEeCCCCCEeEEEEee
Q psy6446 2 GTVWDAVSGEELHSFQ--HPHIVKSSVHFATDSYRLATGSND-K-----NIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK 73 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d-~-----~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~ 73 (134)
+..||..+++...... ....... ++.- ++...++|+.| | .+..||..+..-. ....-...-.......
T Consensus 303 ve~yd~~~~~w~~~a~m~~~r~~~~-~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~--~~a~M~~~R~~~~v~~ 378 (571)
T KOG4441|consen 303 VECYDPKTNEWSSLAPMPSPRCRVG-VAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQWT--PVAPMNTKRSDFGVAV 378 (571)
T ss_pred eEEecCCcCcEeecCCCCccccccc-EEEE-CCEEEEEccccCCCcccceEEEecCCCCcee--ccCCccCccccceeEE
Confidence 5567777664433322 2222222 3333 56778888888 3 5677887764411 1111111111222222
Q ss_pred -CCCEEEEeeCCC-----cEEEEecCCCceeEEEecCCCCeEEEE-ccCCcEEEEec-C------CeEEEEeCCC
Q psy6446 74 -NNTRLISCAEDK-----TVRLWDVSASAEVQKLEFGAVPNSLEI-SRDGTTITVTH-G------SCVTFLDANS 134 (134)
Q Consensus 74 -~~~~l~~~~~d~-----~i~~~d~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~-~------~~i~i~d~~t 134 (134)
+|...+.|+.|| ++..||..+.+....-+......+... .-+|...++|+ + ..+..||..+
T Consensus 379 l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t 453 (571)
T KOG4441|consen 379 LDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPET 453 (571)
T ss_pred ECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCC
Confidence 677778888886 477788776543322222112222221 22455555442 2 3677777653
No 423
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=94.77 E-value=0.55 Score=29.08 Aligned_cols=97 Identities=14% Similarity=0.094 Sum_probs=58.6
Q ss_pred CeeEeecCCCceeeEEeeCCCcee-eEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE
Q psy6446 1 MGTVWDAVSGEELHSFQHPHIVKS-SVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI 79 (134)
Q Consensus 1 ~i~v~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 79 (134)
.|+.+|+.+++.+....-+...+. -+... +++.....=.++...+||..+.+.. ..+. ..+.=..++ .+++.|+
T Consensus 69 ~l~~~d~~tg~~~~~~~l~~~~FgEGit~~-~d~l~qLTWk~~~~f~yd~~tl~~~-~~~~-y~~EGWGLt--~dg~~Li 143 (264)
T PF05096_consen 69 SLRKVDLETGKVLQSVPLPPRYFGEGITIL-GDKLYQLTWKEGTGFVYDPNTLKKI-GTFP-YPGEGWGLT--SDGKRLI 143 (264)
T ss_dssp EEEEEETTTSSEEEEEE-TTT--EEEEEEE-TTEEEEEESSSSEEEEEETTTTEEE-EEEE--SSS--EEE--ECSSCEE
T ss_pred EEEEEECCCCcEEEEEECCccccceeEEEE-CCEEEEEEecCCeEEEEccccceEE-EEEe-cCCcceEEE--cCCCEEE
Confidence 378899999998887775444432 13332 2333344456789999999875433 2332 223334554 5788888
Q ss_pred EeeCCCcEEEEecCCCceeEEEe
Q psy6446 80 SCAEDKTVRLWDVSASAEVQKLE 102 (134)
Q Consensus 80 ~~~~d~~i~~~d~~~~~~~~~~~ 102 (134)
.+.....+..+|..+.+....+.
T Consensus 144 ~SDGS~~L~~~dP~~f~~~~~i~ 166 (264)
T PF05096_consen 144 MSDGSSRLYFLDPETFKEVRTIQ 166 (264)
T ss_dssp EE-SSSEEEEE-TTT-SEEEEEE
T ss_pred EECCccceEEECCcccceEEEEE
Confidence 88888889999998877766665
No 424
>KOG2444|consensus
Probab=94.38 E-value=0.15 Score=30.63 Aligned_cols=62 Identities=18% Similarity=0.272 Sum_probs=34.7
Q ss_pred CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCC-CCEeEEEEeeCCCEEEEe--eCCCcEEEEecC
Q psy6446 31 DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHS-SGIKHVQFFKNNTRLISC--AEDKTVRLWDVS 93 (134)
Q Consensus 31 ~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~--~~d~~i~~~d~~ 93 (134)
++.+..+++.+|.++.|++...+..- ....|. .+......+..++.+... +.|..++.|++.
T Consensus 113 ~~~~~c~~~~dg~ir~~n~~p~k~~g-~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 113 DSSLGCVGAQDGRIRACNIKPNKVLG-YVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVE 177 (238)
T ss_pred ccceeEEeccCCceeeeccccCceee-eeccccCCCcceeEEecCCceEEeeccccchhhhhcchh
Confidence 55678899999999999987654332 222333 233333333334444444 455555555554
No 425
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=94.18 E-value=0.97 Score=32.55 Aligned_cols=71 Identities=15% Similarity=0.220 Sum_probs=49.3
Q ss_pred CCEeEEEEee-CCCEEEEeeCCCcEEEEecCCCce----eEEEe--cC----------CCCeEEEEccCCcEEEEecCCe
Q psy6446 64 SGIKHVQFFK-NNTRLISCAEDKTVRLWDVSASAE----VQKLE--FG----------AVPNSLEISRDGTTITVTHGSC 126 (134)
Q Consensus 64 ~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~----~~~~~--~~----------~~v~~~~~~~~~~~l~~~~~~~ 126 (134)
.+..+++|+| +.+.++.....|...+|++..+.. ...+. .. ..-..+.|.++-..|+++....
T Consensus 146 ~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r~~ 225 (765)
T PF10214_consen 146 FPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNRSK 225 (765)
T ss_pred CccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcCCc
Confidence 4678899999 667899999999999999922111 11111 01 1224778888878888887788
Q ss_pred EEEEeCCC
Q psy6446 127 VTFLDANS 134 (134)
Q Consensus 127 i~i~d~~t 134 (134)
+.++|+++
T Consensus 226 l~~~d~~~ 233 (765)
T PF10214_consen 226 LMLIDFES 233 (765)
T ss_pred eEEEECCC
Confidence 88888764
No 426
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=94.13 E-value=1 Score=30.78 Aligned_cols=61 Identities=26% Similarity=0.381 Sum_probs=45.9
Q ss_pred CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecC
Q psy6446 31 DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVS 93 (134)
Q Consensus 31 ~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 93 (134)
...++++++..|.|++||.-. ......+.+-...|..+..+.+|+++++.+. ..+.+-|++
T Consensus 572 esGyIa~as~kGDirLyDRig-~rAKtalP~lG~aIk~idvta~Gk~ilaTCk-~yllL~d~~ 632 (776)
T COG5167 572 ESGYIAAASRKGDIRLYDRIG-KRAKTALPGLGDAIKHIDVTANGKHILATCK-NYLLLTDVP 632 (776)
T ss_pred cCceEEEecCCCceeeehhhc-chhhhcCcccccceeeeEeecCCcEEEEeec-ceEEEEecc
Confidence 456899999999999999643 3334456677789999999999999876554 356666654
No 427
>PRK13684 Ycf48-like protein; Provisional
Probab=94.12 E-value=0.94 Score=29.11 Aligned_cols=103 Identities=14% Similarity=0.052 Sum_probs=56.0
Q ss_pred eeeEEEccCCcEEEEecCCCeEEEEECCCCCC-CCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEE
Q psy6446 23 KSSVHFATDSYRLATGSNDKNIRIYDLNKPDA-EPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKL 101 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 101 (134)
+..+.+.|++..++++. .|.+..- .+.+.. -......-...+..+.+.++++.++. +..|.+.+-....+..-...
T Consensus 175 ~~~i~~~~~g~~v~~g~-~G~i~~s-~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~v-g~~G~~~~~s~d~G~sW~~~ 251 (334)
T PRK13684 175 VRNLRRSPDGKYVAVSS-RGNFYST-WEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWML-ARGGQIRFNDPDDLESWSKP 251 (334)
T ss_pred EEEEEECCCCeEEEEeC-CceEEEE-cCCCCCeEEEeeCCCcccceeeeEcCCCCEEEE-ecCCEEEEccCCCCCccccc
Confidence 34477788776665554 4544421 111111 11112233457888999988876655 45566543223333322211
Q ss_pred ec-----CCCCeEEEEccCCcEEEEecCCeEE
Q psy6446 102 EF-----GAVPNSLEISRDGTTITVTHGSCVT 128 (134)
Q Consensus 102 ~~-----~~~v~~~~~~~~~~~l~~~~~~~i~ 128 (134)
.. ...+..+.+.|++..++++.+|.+.
T Consensus 252 ~~~~~~~~~~l~~v~~~~~~~~~~~G~~G~v~ 283 (334)
T PRK13684 252 IIPEITNGYGYLDLAYRTPGEIWAGGGNGTLL 283 (334)
T ss_pred cCCccccccceeeEEEcCCCCEEEEcCCCeEE
Confidence 11 2346778888888888877776554
No 428
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=94.10 E-value=1.3 Score=30.72 Aligned_cols=69 Identities=12% Similarity=0.105 Sum_probs=45.0
Q ss_pred EEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEe-eCCCcEEEEecCC
Q psy6446 26 VHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISC-AEDKTVRLWDVSA 94 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~ 94 (134)
+.|+|....|++-..+..-.+++.+........--...+.|.+.+|.+||+.|+.+ +..-.-.+||-..
T Consensus 118 CVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 118 CVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred ccccCCCceEEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence 78999888877665544444566655433222222456789999999999988754 3334567888543
No 429
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=94.06 E-value=0.88 Score=28.54 Aligned_cols=95 Identities=13% Similarity=0.188 Sum_probs=54.9
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEec------CCCeEEEEECCCCCCCCeEEeC-----CCCCEeEEE
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGS------NDKNIRIYDLNKPDAEPTVYRG-----HSSGIKHVQ 70 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~d~~v~i~~~~~~~~~~~~~~~-----~~~~v~~~~ 70 (134)
|++||..+.+-...-..-...+..+.|..+.+.++.|. ....+..||+.+..- ..+.+ -.++|..+.
T Consensus 18 lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w--~~~~~~~s~~ipgpv~a~~ 95 (281)
T PF12768_consen 18 LCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTW--SSLGGGSSNSIPGPVTALT 95 (281)
T ss_pred EEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCee--eecCCcccccCCCcEEEEE
Confidence 68899876655443334445566699986666666653 345677888876432 12222 246788887
Q ss_pred Eee-CCC-EEEEee-C--CCcEEEEecCCCcee
Q psy6446 71 FFK-NNT-RLISCA-E--DKTVRLWDVSASAEV 98 (134)
Q Consensus 71 ~~~-~~~-~l~~~~-~--d~~i~~~d~~~~~~~ 98 (134)
+.. |+. ..+.|. . +..+..||-.+...+
T Consensus 96 ~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~~i 128 (281)
T PF12768_consen 96 FISNDGSNFWVAGRSANGSTFLMKYDGSSWSSI 128 (281)
T ss_pred eeccCCceEEEeceecCCCceEEEEcCCceEec
Confidence 754 443 333333 2 335777775554433
No 430
>PHA03098 kelch-like protein; Provisional
Probab=94.03 E-value=1.3 Score=30.33 Aligned_cols=101 Identities=12% Similarity=0.112 Sum_probs=47.6
Q ss_pred CCcEEEEecCC------CeEEEEECCCCCCCC-eEEeCCCCCEeEEEEeeCCCEEEEeeCC--------CcEEEEecCCC
Q psy6446 31 DSYRLATGSND------KNIRIYDLNKPDAEP-TVYRGHSSGIKHVQFFKNNTRLISCAED--------KTVRLWDVSAS 95 (134)
Q Consensus 31 ~~~~l~~~~~d------~~v~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~~~d~~~~ 95 (134)
+++..+.|+.+ ..+..||..+..-.. .......... + ....++...+.|+.+ ..+..||..+.
T Consensus 389 ~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~-~-~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 466 (534)
T PHA03098 389 NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGG-C-AIYHDGKIYVIGGISYIDNIKVYNIVESYNPVTN 466 (534)
T ss_pred CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCc-e-EEEECCEEEEECCccCCCCCcccceEEEecCCCC
Confidence 56666777632 357788877532110 0000011111 1 222355555666542 13788888766
Q ss_pred ceeEEEe--cCCCCeEEEEccCCcEEEEec------CCeEEEEeCCC
Q psy6446 96 AEVQKLE--FGAVPNSLEISRDGTTITVTH------GSCVTFLDANS 134 (134)
Q Consensus 96 ~~~~~~~--~~~~v~~~~~~~~~~~l~~~~------~~~i~i~d~~t 134 (134)
+....-. ....-.+++. .++..++.|+ .+.+.+||.++
T Consensus 467 ~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~ 512 (534)
T PHA03098 467 KWTELSSLNFPRINASLCI-FNNKIYVVGGDKYEYYINEIEVYDDKT 512 (534)
T ss_pred ceeeCCCCCcccccceEEE-ECCEEEEEcCCcCCcccceeEEEeCCC
Confidence 5433211 1111112222 2556555543 24788898764
No 431
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=93.94 E-value=0.67 Score=26.70 Aligned_cols=28 Identities=18% Similarity=0.182 Sum_probs=20.3
Q ss_pred CCCeEEEEccCC-----c-EEEE-ecCCeEEEEeC
Q psy6446 105 AVPNSLEISRDG-----T-TITV-THGSCVTFLDA 132 (134)
Q Consensus 105 ~~v~~~~~~~~~-----~-~l~~-~~~~~i~i~d~ 132 (134)
..+..++|||.| + +|++ +.++.|.+|..
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~ 120 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGP 120 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEec
Confidence 378899999955 3 3443 47899999864
No 432
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=93.84 E-value=1.1 Score=28.80 Aligned_cols=96 Identities=18% Similarity=0.199 Sum_probs=50.0
Q ss_pred eEEEccCCcEEEEecCCCeEEEEECCCCC-CCCe----EEeCCCCCEeEEEEeeC---CCEEEEeeC-C--------CcE
Q psy6446 25 SVHFATDSYRLATGSNDKNIRIYDLNKPD-AEPT----VYRGHSSGIKHVQFFKN---NTRLISCAE-D--------KTV 87 (134)
Q Consensus 25 ~~~~~~~~~~l~~~~~d~~v~i~~~~~~~-~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~-d--------~~i 87 (134)
.++|.|+|+.+++ ...|.|++++.+... .... ...........++++|+ ..+|..... . ..|
T Consensus 6 ~~a~~pdG~l~v~-e~~G~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~~~v 84 (331)
T PF07995_consen 6 SMAFLPDGRLLVA-ERSGRIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDNDNRV 84 (331)
T ss_dssp EEEEETTSCEEEE-ETTTEEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEEEEE
T ss_pred EEEEeCCCcEEEE-eCCceEEEEeCCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcceee
Confidence 3999999877665 559999999933221 1111 11233457899999984 344433222 1 234
Q ss_pred EEEecCCC--c-----ee-EEEec----CCCCeEEEEccCCcEEEE
Q psy6446 88 RLWDVSAS--A-----EV-QKLEF----GAVPNSLEISRDGTTITV 121 (134)
Q Consensus 88 ~~~d~~~~--~-----~~-~~~~~----~~~v~~~~~~~~~~~l~~ 121 (134)
.-|....+ . .+ ..+.. ......+.|.|||.+.++
T Consensus 85 ~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs 130 (331)
T PF07995_consen 85 VRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVS 130 (331)
T ss_dssp EEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEE
T ss_pred EEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEE
Confidence 44444333 1 11 11112 123467999999966554
No 433
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=93.82 E-value=0.22 Score=20.85 Aligned_cols=20 Identities=25% Similarity=0.205 Sum_probs=13.8
Q ss_pred CCcEEEEecCCeEEEEeCCC
Q psy6446 115 DGTTITVTHGSCVTFLDANS 134 (134)
Q Consensus 115 ~~~~l~~~~~~~i~i~d~~t 134 (134)
++..++.+.+|.++.+|.+|
T Consensus 21 ~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 21 GGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp TSEEEEE-TTSEEEEEETT-
T ss_pred CCEEEEEcCCCEEEEEeCCC
Confidence 45555566789999999875
No 434
>KOG1897|consensus
Probab=93.80 E-value=2 Score=31.72 Aligned_cols=107 Identities=5% Similarity=-0.009 Sum_probs=58.2
Q ss_pred EEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeC--CC----EEEEeeCCCcEEEE-ecCCCcee
Q psy6446 26 VHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKN--NT----RLISCAEDKTVRLW-DVSASAEV 98 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~----~l~~~~~d~~i~~~-d~~~~~~~ 98 (134)
...+.+...++.++.++.+...++..........+.-...|.|++++|- ++ .++.|..+..+.+. -+.+....
T Consensus 493 ~~~~~n~sqVvvA~~~~~l~y~~i~~~~l~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~ 572 (1096)
T KOG1897|consen 493 GVVSANASQVVVAGGGLALFYLEIEDGGLREVSHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILI 572 (1096)
T ss_pred EEEeecceEEEEecCccEEEEEEeeccceeeeeeheecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCccee
Confidence 3334455567777777777777766544111222334578999999973 32 56677766554333 33333333
Q ss_pred EEEe--cCCCCeE---EEEccCCcEEEEe-cCCeEEEEeC
Q psy6446 99 QKLE--FGAVPNS---LEISRDGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 99 ~~~~--~~~~v~~---~~~~~~~~~l~~~-~~~~i~i~d~ 132 (134)
.... .+...++ ..+-.|..+|.++ +||.+..|.+
T Consensus 573 ~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~ 612 (1096)
T KOG1897|consen 573 THEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVL 612 (1096)
T ss_pred eeeccCCCccchheeeEEeeccceEEEEEcCCceEEEEEE
Confidence 2221 2222233 3344456677766 7888777654
No 435
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=93.24 E-value=1.6 Score=29.03 Aligned_cols=88 Identities=11% Similarity=0.153 Sum_probs=53.0
Q ss_pred EEEccCCcEEEEecCCCeEEE---EECCCCC-CCC-e--EEe---CCC--CCEeEEEEee-----------CCCEEEEee
Q psy6446 26 VHFATDSYRLATGSNDKNIRI---YDLNKPD-AEP-T--VYR---GHS--SGIKHVQFFK-----------NNTRLISCA 82 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~d~~v~i---~~~~~~~-~~~-~--~~~---~~~--~~v~~~~~~~-----------~~~~l~~~~ 82 (134)
+..+|++..|+.+..+..+.+ |+..... ... . ... .+. ..|+++.+-| |...++.|.
T Consensus 7 isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~VG~ 86 (415)
T PF14655_consen 7 ISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAVGT 86 (415)
T ss_pred EEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEEEe
Confidence 778899999999987766555 5332111 100 0 111 111 4577776654 245678899
Q ss_pred CCCcEEEEecCCCceeEEEecCCCCeEEEEc
Q psy6446 83 EDKTVRLWDVSASAEVQKLEFGAVPNSLEIS 113 (134)
Q Consensus 83 ~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~ 113 (134)
.+|.+++|.....-....+.|+.+|..+...
T Consensus 87 ssG~vrfyte~G~LL~~Q~~h~~pV~~ik~~ 117 (415)
T PF14655_consen 87 SSGYVRFYTENGVLLLSQLLHEEPVLKIKCR 117 (415)
T ss_pred cccEEEEEeccchHHHHHhcCccceEEEEec
Confidence 9999999976433333344466777776654
No 436
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=93.19 E-value=1.5 Score=28.49 Aligned_cols=72 Identities=13% Similarity=0.003 Sum_probs=43.8
Q ss_pred cEEEEecCCCeEEEEECCCCCCCCeEEeCC-CCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEecCC
Q psy6446 33 YRLATGSNDKNIRIYDLNKPDAEPTVYRGH-SSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEFGA 105 (134)
Q Consensus 33 ~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 105 (134)
..++++..+|.+.-.|..++.......... ...+..-.+..+|+ ++.++.++.+..+|.++++.........
T Consensus 69 g~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~ 141 (370)
T COG1520 69 GTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTLVWSRNVGG 141 (370)
T ss_pred CeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCcEEEEEecCC
Confidence 345555778888888887765322111110 12223333333555 7777888888889988888888776555
No 437
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=93.12 E-value=1.1 Score=26.87 Aligned_cols=47 Identities=15% Similarity=0.128 Sum_probs=35.2
Q ss_pred CEEEEeeCCCcEEEEecCC--CceeEEEecCCCCeEEEEccCCcEEEEe
Q psy6446 76 TRLISCAEDKTVRLWDVSA--SAEVQKLEFGAVPNSLEISRDGTTITVT 122 (134)
Q Consensus 76 ~~l~~~~~d~~i~~~d~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 122 (134)
+.|+.+.....|.+|++.+ .+....+..-+.|..+.++..|.++++-
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTl 77 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTL 77 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEE
Confidence 4454446667799999883 3455566666889999999999999974
No 438
>PHA02713 hypothetical protein; Provisional
Probab=93.01 E-value=2.1 Score=29.68 Aligned_cols=22 Identities=23% Similarity=0.397 Sum_probs=15.5
Q ss_pred CCcEEEEecCCC-----eEEEEECCCC
Q psy6446 31 DSYRLATGSNDK-----NIRIYDLNKP 52 (134)
Q Consensus 31 ~~~~l~~~~~d~-----~v~i~~~~~~ 52 (134)
+++..+.|+.++ .+..||..+.
T Consensus 351 ~g~IYviGG~~~~~~~~sve~Ydp~~~ 377 (557)
T PHA02713 351 DDTIYAIGGQNGTNVERTIECYTMGDD 377 (557)
T ss_pred CCEEEEECCcCCCCCCceEEEEECCCC
Confidence 677777887654 4778887753
No 439
>KOG2377|consensus
Probab=92.91 E-value=2 Score=29.09 Aligned_cols=97 Identities=11% Similarity=0.160 Sum_probs=56.3
Q ss_pred ceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCC---eEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCc-e
Q psy6446 22 VKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEP---TVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASA-E 97 (134)
Q Consensus 22 ~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-~ 97 (134)
.+.++.|++|.+.|++--.+..|.+++........ ...+.....|....|+.+ ..++.....| +-+|.+...+ .
T Consensus 68 ~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pekrs 145 (657)
T KOG2377|consen 68 EIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPEKRS 145 (657)
T ss_pred ceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchhhhh
Confidence 44459999999999999999999999985432211 122233345778888754 4455444443 4555443222 1
Q ss_pred eEEEe-cCCCCeEEEEccCCcEEE
Q psy6446 98 VQKLE-FGAVPNSLEISRDGTTIT 120 (134)
Q Consensus 98 ~~~~~-~~~~v~~~~~~~~~~~l~ 120 (134)
++... +...|.=..|.++.+.++
T Consensus 146 lRlVks~~~nvnWy~yc~et~v~L 169 (657)
T KOG2377|consen 146 LRLVKSHNLNVNWYMYCPETAVIL 169 (657)
T ss_pred hhhhhhcccCccEEEEccccceEe
Confidence 11111 234455556666665544
No 440
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=92.86 E-value=1.4 Score=27.10 Aligned_cols=122 Identities=16% Similarity=0.151 Sum_probs=63.8
Q ss_pred eEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecC-C--CeEEEEECCCC--CCCCeEE---eCCCCCEeEEEEeeC
Q psy6446 3 TVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSN-D--KNIRIYDLNKP--DAEPTVY---RGHSSGIKHVQFFKN 74 (134)
Q Consensus 3 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d--~~v~i~~~~~~--~~~~~~~---~~~~~~v~~~~~~~~ 74 (134)
.+||+.+++....--..+...+.-.+-+||+++.+|+. + ..+++++.... .+..... -.....-.....-||
T Consensus 49 ~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~D 128 (243)
T PF07250_consen 49 VEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLPD 128 (243)
T ss_pred EEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECCC
Confidence 47888877653321133333333556789999998865 2 35777775441 1111100 011223344555679
Q ss_pred CCEEEEeeCCC-cEEEEecCC-CceeEEEe---c------CCCCeEEEEccCCcEEEEecC
Q psy6446 75 NTRLISCAEDK-TVRLWDVSA-SAEVQKLE---F------GAVPNSLEISRDGTTITVTHG 124 (134)
Q Consensus 75 ~~~l~~~~~d~-~i~~~d~~~-~~~~~~~~---~------~~~v~~~~~~~~~~~l~~~~~ 124 (134)
|+.++.|+... ....|+-.. ......+. . ...-.-+-..|+|+.++.+..
T Consensus 129 G~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~ 189 (243)
T PF07250_consen 129 GRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANR 189 (243)
T ss_pred CCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcC
Confidence 99998888764 345555422 11111111 0 011135666789998877654
No 441
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=92.80 E-value=0.34 Score=20.04 Aligned_cols=25 Identities=24% Similarity=0.325 Sum_probs=15.7
Q ss_pred eeeEEEccCCcEEEEecC-C--CeEEEE
Q psy6446 23 KSSVHFATDSYRLATGSN-D--KNIRIY 47 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~-d--~~v~i~ 47 (134)
.....|+|||+.|+-.+. + |...||
T Consensus 11 ~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 11 DGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp EEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred ccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 334999999998876543 3 444444
No 442
>KOG1916|consensus
Probab=92.80 E-value=0.24 Score=35.87 Aligned_cols=72 Identities=11% Similarity=0.206 Sum_probs=42.4
Q ss_pred EEEccCCcEEEEecCCCeEEEEECCCC-CC---CCeEEeCCC-C-CEeEEEEeeCC---------CEEEEee-CCCcEEE
Q psy6446 26 VHFATDSYRLATGSNDKNIRIYDLNKP-DA---EPTVYRGHS-S-GIKHVQFFKNN---------TRLISCA-EDKTVRL 89 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~d~~v~i~~~~~~-~~---~~~~~~~~~-~-~v~~~~~~~~~---------~~l~~~~-~d~~i~~ 89 (134)
-..+|||+.++.++.||.++.|.+.-. +. .....+.|. + .|+.+ ++.+. .++++++ .+..+++
T Consensus 241 ~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~l-c~~~~~~~v~i~~w~~~Itttd~nre~k~ 319 (1283)
T KOG1916|consen 241 ASLSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWL-CHKQEILVVSIGKWVLRITTTDVNREEKF 319 (1283)
T ss_pred eeeCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCCCCCCCceeee-eccccccCCccceeEEEEecccCCcceeE
Confidence 347899999999999999888876421 11 112234454 2 23333 43222 2233433 4556888
Q ss_pred EecCCCcee
Q psy6446 90 WDVSASAEV 98 (134)
Q Consensus 90 ~d~~~~~~~ 98 (134)
|.....+|.
T Consensus 320 w~~a~w~Cl 328 (1283)
T KOG1916|consen 320 WAEAPWQCL 328 (1283)
T ss_pred eeccchhhh
Confidence 887776665
No 443
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=92.54 E-value=2 Score=28.25 Aligned_cols=129 Identities=17% Similarity=0.235 Sum_probs=71.3
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEE----ccCCcE--EEEec-CC---CeEEEEECCCCCCCCeEEe-------CCCC
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHF----ATDSYR--LATGS-ND---KNIRIYDLNKPDAEPTVYR-------GHSS 64 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--l~~~~-~d---~~v~i~~~~~~~~~~~~~~-------~~~~ 64 (134)
+.+||+. |+.+..+... ...+ +.. .-.|+. |+.++ ++ ..|++|.+........... ....
T Consensus 80 L~VYdL~-Gk~lq~~~~G-r~NN-VDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~~v~~~~~p~~~~~~ 156 (381)
T PF02333_consen 80 LYVYDLD-GKELQSLPVG-RPNN-VDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGELTDVTDPAAPIATDLS 156 (381)
T ss_dssp EEEEETT-S-EEEEE-SS--EEE-EEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEEE-CBTTC-EE-SSS
T ss_pred EEEEcCC-CcEEEeecCC-Ccce-eeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcceEcCCCCcccccccc
Confidence 5689976 7777776521 2222 222 223443 44443 32 4689997764221111111 1123
Q ss_pred CEeEEEEe--e-CCC-EEEEeeCCCcEEEEecC---CC----ceeEEEecCCCCeEEEEccCCcEEEEe-cCCeEEEEeC
Q psy6446 65 GIKHVQFF--K-NNT-RLISCAEDKTVRLWDVS---AS----AEVQKLEFGAVPNSLEISRDGTTITVT-HGSCVTFLDA 132 (134)
Q Consensus 65 ~v~~~~~~--~-~~~-~l~~~~~d~~i~~~d~~---~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~ 132 (134)
.+..+++- + +++ +.+....+|.+..|.+. .+ +.++.+...+.+..+..+....+|..+ .+.-|+-|+.
T Consensus 157 e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g~LYvgEE~~GIW~y~A 236 (381)
T PF02333_consen 157 EPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDDETGRLYVGEEDVGIWRYDA 236 (381)
T ss_dssp SEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEETTTTEEEEEETTTEEEEEES
T ss_pred cceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEecccCCEEEecCccEEEEEec
Confidence 46777764 3 344 45567788988877764 23 356777777888899988887778777 5677887776
Q ss_pred C
Q psy6446 133 N 133 (134)
Q Consensus 133 ~ 133 (134)
+
T Consensus 237 e 237 (381)
T PF02333_consen 237 E 237 (381)
T ss_dssp S
T ss_pred C
Confidence 4
No 444
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=92.28 E-value=2.1 Score=27.90 Aligned_cols=95 Identities=7% Similarity=0.108 Sum_probs=50.6
Q ss_pred eEEEccCCcEEEEecCCCeEEEEECCCCC----CCCeEEe---C----CCCCEeEEEEeeCCCEEEEeeCC---------
Q psy6446 25 SVHFATDSYRLATGSNDKNIRIYDLNKPD----AEPTVYR---G----HSSGIKHVQFFKNNTRLISCAED--------- 84 (134)
Q Consensus 25 ~~~~~~~~~~l~~~~~d~~v~i~~~~~~~----~~~~~~~---~----~~~~v~~~~~~~~~~~l~~~~~d--------- 84 (134)
.+++.+++ +++++.....++.|..... .....+. . +......+.|.||+...++.+..
T Consensus 76 Gi~~~~~G--lyV~~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~ 153 (367)
T TIGR02604 76 GLAVAVGG--VYVATPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPG 153 (367)
T ss_pred ceeEecCC--EEEeCCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCC
Confidence 37788777 4444444433344543211 1111111 1 13447789999999876654421
Q ss_pred ----------CcEEEEecCCCceeEEEec-CCCCeEEEEccCCcEEEEe
Q psy6446 85 ----------KTVRLWDVSASAEVQKLEF-GAVPNSLEISRDGTTITVT 122 (134)
Q Consensus 85 ----------~~i~~~d~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 122 (134)
+.+.-++..+++ ...+.. ......++|+|+|.++++-
T Consensus 154 ~~~~~~~~~~g~i~r~~pdg~~-~e~~a~G~rnp~Gl~~d~~G~l~~td 201 (367)
T TIGR02604 154 TSDESRQGLGGGLFRYNPDGGK-LRVVAHGFQNPYGHSVDSWGDVFFCD 201 (367)
T ss_pred CccCcccccCceEEEEecCCCe-EEEEecCcCCCccceECCCCCEEEEc
Confidence 334444444333 222222 2335789999999887764
No 445
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=92.19 E-value=1.6 Score=26.30 Aligned_cols=117 Identities=12% Similarity=0.118 Sum_probs=59.2
Q ss_pred eeEEeeCCCceee-EEEccCCcEEEEecC--CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEE-EeeCCCcEE
Q psy6446 13 LHSFQHPHIVKSS-VHFATDSYRLATGSN--DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLI-SCAEDKTVR 88 (134)
Q Consensus 13 ~~~~~~~~~~~~~-~~~~~~~~~l~~~~~--d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~ 88 (134)
++++.|....++- +.. .++..+.+.+. ...|++||+.+++......-. ...+..--...-+..+. ..-.++...
T Consensus 37 i~~yphDs~sfTQGL~~-~~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~-~~~~FgEGit~~gd~~y~LTw~egvaf 114 (262)
T COG3823 37 IRTYPHDSTSFTQGLEY-LDGHILESTGLYGFSKIRVSDLTTGQEIFSEKLA-PDTVFGEGITKLGDYFYQLTWKEGVAF 114 (262)
T ss_pred EEeccCchhhhhcceee-eCCEEEEeccccccceeEEEeccCceEEEEeecC-CccccccceeeccceEEEEEeccceeE
Confidence 4444454443331 222 24545555544 347999999976643221111 12222222222233332 234577788
Q ss_pred EEecCCCceeEEEecCCCCeEEEEccCCcEEEEecCCeEEEEeC
Q psy6446 89 LWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 89 ~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~ 132 (134)
.+|..+.+++..+..++.-..++-... +.+.+.+...+..-|.
T Consensus 115 ~~d~~t~~~lg~~~y~GeGWgLt~d~~-~LimsdGsatL~frdP 157 (262)
T COG3823 115 KYDADTLEELGRFSYEGEGWGLTSDDK-NLIMSDGSATLQFRDP 157 (262)
T ss_pred EEChHHhhhhcccccCCcceeeecCCc-ceEeeCCceEEEecCH
Confidence 888888888887777666666654322 2333333445555443
No 446
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=92.02 E-value=1.8 Score=26.62 Aligned_cols=101 Identities=12% Similarity=0.108 Sum_probs=60.4
Q ss_pred ceeeEEEccCCcEEEEecCCCeEEEEE-CCCCCCCCeEEeCC--CCCEeEEEEeeCCCEEEEee---CCCcEEEEecC--
Q psy6446 22 VKSSVHFATDSYRLATGSNDKNIRIYD-LNKPDAEPTVYRGH--SSGIKHVQFFKNNTRLISCA---EDKTVRLWDVS-- 93 (134)
Q Consensus 22 ~~~~~~~~~~~~~l~~~~~d~~v~i~~-~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~---~d~~i~~~d~~-- 93 (134)
.+....|++++...+....+...+++. ...+.......... .+.|..++++|||..++... .++.+.+--+.
T Consensus 67 ~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~ 146 (253)
T PF10647_consen 67 SLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRD 146 (253)
T ss_pred ccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeC
Confidence 344488999987777766666666663 22222221122211 12899999999999887655 24566665443
Q ss_pred -CCcee------EEEe-cCCCCeEEEEccCCcEEEEe
Q psy6446 94 -ASAEV------QKLE-FGAVPNSLEISRDGTTITVT 122 (134)
Q Consensus 94 -~~~~~------~~~~-~~~~v~~~~~~~~~~~l~~~ 122 (134)
.+... .... ....+..+.|.+++.+++.+
T Consensus 147 ~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~ 183 (253)
T PF10647_consen 147 GDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLG 183 (253)
T ss_pred CCCCcceeccceEecccccCcceeeeecCCCEEEEEe
Confidence 22011 1111 23577899999999887765
No 447
>KOG4460|consensus
Probab=91.94 E-value=2.9 Score=28.92 Aligned_cols=74 Identities=12% Similarity=0.181 Sum_probs=48.0
Q ss_pred EEEccCCcEEEEecCCCeEEEEECC---------CCCCCC---------eEEe-CCCCCEeEEEEeeCC---CEEEEeeC
Q psy6446 26 VHFATDSYRLATGSNDKNIRIYDLN---------KPDAEP---------TVYR-GHSSGIKHVQFFKNN---TRLISCAE 83 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~d~~v~i~~~~---------~~~~~~---------~~~~-~~~~~v~~~~~~~~~---~~l~~~~~ 83 (134)
+..++.|..++..+.+|.+.++-.+ .++... +.+. ...-.+.+++|+|+. ..|..-..
T Consensus 109 vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~iL~s 188 (741)
T KOG4460|consen 109 VLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLVLLTS 188 (741)
T ss_pred EEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEEEEec
Confidence 6668889998888888866554321 111110 0111 112346788999965 67888889
Q ss_pred CCcEEEEecCCCceeE
Q psy6446 84 DKTVRLWDVSASAEVQ 99 (134)
Q Consensus 84 d~~i~~~d~~~~~~~~ 99 (134)
|+.+++||+.....+.
T Consensus 189 dnviRiy~lS~~tely 204 (741)
T KOG4460|consen 189 DNVIRIYSLSEPTELY 204 (741)
T ss_pred CcEEEEEecCCcchhh
Confidence 9999999998765543
No 448
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=91.90 E-value=3.7 Score=29.83 Aligned_cols=75 Identities=13% Similarity=0.115 Sum_probs=44.9
Q ss_pred eeEeecCCCceeeEEeeCC-------------------CceeeEEEccCCcEEEE-ecCCCeEEEEECCCCCCCCeEEeC
Q psy6446 2 GTVWDAVSGEELHSFQHPH-------------------IVKSSVHFATDSYRLAT-GSNDKNIRIYDLNKPDAEPTVYRG 61 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~l~~-~~~d~~v~i~~~~~~~~~~~~~~~ 61 (134)
|.-+|+.+|+.+...+... .... -...-.+.+++. ++.|+.++-+|.++++.+-+....
T Consensus 643 l~AiDl~tGk~~W~~~~g~~~~~~p~~~~~~~~~~~g~p~~g-G~l~TagglvF~~gt~d~~l~A~D~~tGk~lW~~~l~ 721 (764)
T TIGR03074 643 MAAIDLKTGKVVWQHPNGTVRDTGPMGIRMPLPIPIGVPTLG-GPLATAGGLVFIGATQDNYLRAYDLSTGKELWKARLP 721 (764)
T ss_pred EEEEECCCCcEeeeeECCccccccccccccccccccCCcccC-CcEEEcCCEEEEEeCCCCEEEEEECCCCceeeEeeCC
Confidence 6778999999888776320 0001 111224566766 788999999999998866544333
Q ss_pred CCCCEeEEEEe-eCCCE
Q psy6446 62 HSSGIKHVQFF-KNNTR 77 (134)
Q Consensus 62 ~~~~v~~~~~~-~~~~~ 77 (134)
....-.=+.+. .+|+.
T Consensus 722 ~~~~a~P~tY~~~~GkQ 738 (764)
T TIGR03074 722 AGGQATPMTYMGKDGKQ 738 (764)
T ss_pred CCcccCCEEEEecCCEE
Confidence 22223334455 46643
No 449
>KOG1897|consensus
Probab=91.66 E-value=4.3 Score=30.16 Aligned_cols=97 Identities=11% Similarity=0.087 Sum_probs=65.2
Q ss_pred CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCc--eeEEEe--cCCC
Q psy6446 31 DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASA--EVQKLE--FGAV 106 (134)
Q Consensus 31 ~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~--~~~~~~--~~~~ 106 (134)
+|+++|.- ...|++|++.+.+.. +....+..++..+...-.+..++.|.--+.+.+...+..+ -..... ++..
T Consensus 839 ngkllA~I--n~~vrLye~t~~~eL-r~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~evArD~~p~W 915 (1096)
T KOG1897|consen 839 NGKLLAGI--NQSVRLYEWTTEREL-RIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFEEVARDYNPNW 915 (1096)
T ss_pred CCeEEEec--CcEEEEEEcccccee-hhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceEEeehhhCccc
Confidence 46555443 468999999876443 4455677889999999899999999988887776655433 222222 4556
Q ss_pred CeEEEEccCCcEEEEecCCeEEEE
Q psy6446 107 PNSLEISRDGTTITVTHGSCVTFL 130 (134)
Q Consensus 107 v~~~~~~~~~~~l~~~~~~~i~i~ 130 (134)
+.++.+-.+..++.+-.+|.+.+.
T Consensus 916 mtaveil~~d~ylgae~~gNlf~v 939 (1096)
T KOG1897|consen 916 MTAVEILDDDTYLGAENSGNLFTV 939 (1096)
T ss_pred eeeEEEecCceEEeecccccEEEE
Confidence 677777666566655566666654
No 450
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=91.55 E-value=2.4 Score=27.00 Aligned_cols=95 Identities=15% Similarity=0.121 Sum_probs=61.7
Q ss_pred EEccCCcEEEEecCCCeEEEEECCCCCCCCeE--EeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe--
Q psy6446 27 HFATDSYRLATGSNDKNIRIYDLNKPDAEPTV--YRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE-- 102 (134)
Q Consensus 27 ~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-- 102 (134)
.|.-.|+++.++..|.-.-+.|+.+...+... +.........++.+ |++-..+..|+-+.+-|+.+......+.
T Consensus 133 gv~vsGn~aYVadlddgfLivdvsdpssP~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~ 210 (370)
T COG5276 133 GVYVSGNYAYVADLDDGFLIVDVSDPSSPQLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSY 210 (370)
T ss_pred EEEecCCEEEEeeccCcEEEEECCCCCCceeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEE
Confidence 33446888888886666778898876654321 22223333455554 6677777788889999998776555444
Q ss_pred -cCCCCeEEEEccCCcEEEEec
Q psy6446 103 -FGAVPNSLEISRDGTTITVTH 123 (134)
Q Consensus 103 -~~~~v~~~~~~~~~~~l~~~~ 123 (134)
.+..+.++..+++..+++...
T Consensus 211 n~g~g~~sv~vsdnr~y~vvy~ 232 (370)
T COG5276 211 NTGPGTYSVSVSDNRAYLVVYD 232 (370)
T ss_pred ecCCceEEEEecCCeeEEEEcc
Confidence 344678888887766665443
No 451
>KOG2280|consensus
Probab=91.03 E-value=1.3 Score=31.54 Aligned_cols=47 Identities=17% Similarity=0.269 Sum_probs=34.3
Q ss_pred eeEeecCCCceeeEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCC
Q psy6446 2 GTVWDAVSGEELHSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNK 51 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~ 51 (134)
|+||+. +|+.+..+- .+...+. +.|+.+. .|++...+|.+++|++-.
T Consensus 66 I~If~~-sG~lL~~~~w~~~~lI~-mgWs~~e-eLI~v~k~g~v~Vy~~~g 113 (829)
T KOG2280|consen 66 IRIFNI-SGQLLGRILWKHGELIG-MGWSDDE-ELICVQKDGTVHVYGLLG 113 (829)
T ss_pred EEEEec-cccchHHHHhcCCCeee-ecccCCc-eEEEEeccceEEEeecch
Confidence 677885 477776655 3346777 9999765 566667999999999864
No 452
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=90.86 E-value=3.4 Score=27.47 Aligned_cols=100 Identities=7% Similarity=0.031 Sum_probs=55.2
Q ss_pred EEEccCCcEEEEecCCCeEEEEECCCCCCC-CeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCc-----eeE
Q psy6446 26 VHFATDSYRLATGSNDKNIRIYDLNKPDAE-PTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASA-----EVQ 99 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-----~~~ 99 (134)
+..++++..++.+..-..++-||-.. .. ..........+..+.+.+++..++.+ ..|.+..- ...++ ...
T Consensus 244 v~~~~dG~~~~vg~~G~~~~s~d~G~--~~W~~~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l~~S-~d~G~~~~~~~f~ 319 (398)
T PLN00033 244 VNRSPDGDYVAVSSRGNFYLTWEPGQ--PYWQPHNRASARRIQNMGWRADGGLWLLT-RGGGLYVS-KGTGLTEEDFDFE 319 (398)
T ss_pred EEEcCCCCEEEEECCccEEEecCCCC--cceEEecCCCccceeeeeEcCCCCEEEEe-CCceEEEe-cCCCCccccccee
Confidence 44566776666665433223343221 11 11122334568889998888777654 55554332 33333 222
Q ss_pred EEec---CCCCeEEEEccCCcEEEEecCCeEEE
Q psy6446 100 KLEF---GAVPNSLEISRDGTTITVTHGSCVTF 129 (134)
Q Consensus 100 ~~~~---~~~v~~~~~~~~~~~l~~~~~~~i~i 129 (134)
.... ...+..+.+.+++..++++..|.+..
T Consensus 320 ~~~~~~~~~~l~~v~~~~d~~~~a~G~~G~v~~ 352 (398)
T PLN00033 320 EADIKSRGFGILDVGYRSKKEAWAAGGSGILLR 352 (398)
T ss_pred ecccCCCCcceEEEEEcCCCcEEEEECCCcEEE
Confidence 2222 23478888998988888887776654
No 453
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=90.65 E-value=0.59 Score=18.35 Aligned_cols=24 Identities=13% Similarity=0.079 Sum_probs=19.4
Q ss_pred EEEEeeCCCcEEEEecCCCceeEE
Q psy6446 77 RLISCAEDKTVRLWDVSASAEVQK 100 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~~~~ 100 (134)
.++.++.++.+..+|..+|+....
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~W~ 31 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEILWT 31 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEEEE
Confidence 577778889999999988887654
No 454
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=90.61 E-value=2 Score=31.24 Aligned_cols=101 Identities=15% Similarity=0.127 Sum_probs=53.2
Q ss_pred EEEccCCcEEEEecCCC-----eEEEEECCCCCCC-CeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeE
Q psy6446 26 VHFATDSYRLATGSNDK-----NIRIYDLNKPDAE-PTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQ 99 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~d~-----~v~i~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 99 (134)
+.|.|+|..+++-..|| .|.++..+.-..- ...-.+....+...+|+-....++ ....+.+++|-..+-....
T Consensus 252 LSWkpqgS~~ati~td~~~~S~~ViFfErNGLrHGef~lr~~~dEk~~~~~wn~~s~vla-v~~~n~~~lwttkNyhWYL 330 (1243)
T COG5290 252 LSWKPQGSKYATIGTDGCSTSESVIFFERNGLRHGEFDLRVGCDEKAFLENWNLLSTVLA-VAEGNLLKLWTTKNYHWYL 330 (1243)
T ss_pred cccccCCceeeeeccCCCCCcceEEEEccCCcccCCccccCCchhhhhhhhhhHHHHHHH-HhhcceEEEEEccceEEEE
Confidence 89999999999876554 3444443221100 001112233455666654333332 3445679999765544333
Q ss_pred EEe-cCCCCeEEEEccCCc-EEEEecCCeE
Q psy6446 100 KLE-FGAVPNSLEISRDGT-TITVTHGSCV 127 (134)
Q Consensus 100 ~~~-~~~~v~~~~~~~~~~-~l~~~~~~~i 127 (134)
... .-..+.-++|+|... .+.....+.|
T Consensus 331 K~e~~ip~~s~vkwhpe~~nTl~f~d~~~I 360 (1243)
T COG5290 331 KVERQIPGISYVKWHPEEKNTLLFRDGERI 360 (1243)
T ss_pred EEeecCCCcceeeeccccCcEEEEecCCeE
Confidence 322 234567788998653 3444433443
No 455
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=90.51 E-value=4 Score=27.69 Aligned_cols=106 Identities=9% Similarity=0.074 Sum_probs=58.1
Q ss_pred eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCC-C----eEEe-CCCCCEeEEEEeeCC------CEEEEee---
Q psy6446 18 HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAE-P----TVYR-GHSSGIKHVQFFKNN------TRLISCA--- 82 (134)
Q Consensus 18 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~-~----~~~~-~~~~~v~~~~~~~~~------~~l~~~~--- 82 (134)
+-..... ++|.|++++|++--..|.|++++....... . .... .-.+....++++|+. .++....
T Consensus 28 GL~~Pw~-maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~ 106 (454)
T TIGR03606 28 GLNKPWA-LLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYK 106 (454)
T ss_pred CCCCceE-EEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEecc
Confidence 3344445 999999977766554699999876543211 1 1111 135678999999875 2444332
Q ss_pred -------CCCcEEEEecCCC--c---eeEEEe-c----CCCCeEEEEccCCcEEEEecC
Q psy6446 83 -------EDKTVRLWDVSAS--A---EVQKLE-F----GAVPNSLEISRDGTTITVTHG 124 (134)
Q Consensus 83 -------~d~~i~~~d~~~~--~---~~~~~~-~----~~~v~~~~~~~~~~~l~~~~~ 124 (134)
....|.-+.+... . ....+. . ...-..+.|.|||.+.++.+|
T Consensus 107 ~~~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~LYVs~GD 165 (454)
T TIGR03606 107 NGDKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGKIYYTIGE 165 (454)
T ss_pred CCCCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCCCcEEEEECC
Confidence 1233444544321 1 111111 1 122467889999986665433
No 456
>KOG4441|consensus
Probab=90.28 E-value=4.8 Score=28.21 Aligned_cols=101 Identities=15% Similarity=0.143 Sum_probs=50.6
Q ss_pred CCcEEEEecCCC------eEEEEECCCCCCCC-eEEeCCCCCEeEEEEeeCCCEEEEeeCCC-----cEEEEecCCCcee
Q psy6446 31 DSYRLATGSNDK------NIRIYDLNKPDAEP-TVYRGHSSGIKHVQFFKNNTRLISCAEDK-----TVRLWDVSASAEV 98 (134)
Q Consensus 31 ~~~~l~~~~~d~------~v~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~~d~~~~~~~ 98 (134)
+|...++|+.++ .+..||..+..-.. ........... ++. -++...+.|+.|+ ++..||..+.+..
T Consensus 427 ~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g-~a~-~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~ 504 (571)
T KOG4441|consen 427 GGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFG-VAV-LNGKIYVVGGFDGTSALSSVERYDPETNQWT 504 (571)
T ss_pred CCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccce-EEE-ECCEEEEECCccCCCccceEEEEcCCCCcee
Confidence 677778887554 46778877643110 00111111111 222 2666677777665 3677888776655
Q ss_pred EEEecCCCC--eEEEEccCCcEEEE-ecC-----CeEEEEeCCC
Q psy6446 99 QKLEFGAVP--NSLEISRDGTTITV-THG-----SCVTFLDANS 134 (134)
Q Consensus 99 ~~~~~~~~v--~~~~~~~~~~~l~~-~~~-----~~i~i~d~~t 134 (134)
..-....+. ..++.. ++...+. |.+ ++|..||..+
T Consensus 505 ~v~~m~~~rs~~g~~~~-~~~ly~vGG~~~~~~l~~ve~ydp~~ 547 (571)
T KOG4441|consen 505 MVAPMTSPRSAVGVVVL-GGKLYAVGGFDGNNNLNTVECYDPET 547 (571)
T ss_pred EcccCccccccccEEEE-CCEEEEEecccCccccceeEEcCCCC
Confidence 442222222 222222 3444444 433 4677777653
No 457
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=90.15 E-value=5.7 Score=28.94 Aligned_cols=71 Identities=10% Similarity=0.105 Sum_probs=45.1
Q ss_pred CcEEEEecCCCeEEEEECCCCCCCCeEEeCCCC--------CEeEEEEe----------------eCCCEEEEeeCCCcE
Q psy6446 32 SYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSS--------GIKHVQFF----------------KNNTRLISCAEDKTV 87 (134)
Q Consensus 32 ~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~--------~v~~~~~~----------------~~~~~l~~~~~d~~i 87 (134)
+..++.++.++.|.-.|..+++..-+ +..... ....+.+. ..+..++.++.|+.+
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~-~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~L 272 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWK-FDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARL 272 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEE-EcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeE
Confidence 56777778888888888888764332 111100 01122221 134477888889999
Q ss_pred EEEecCCCceeEEEec
Q psy6446 88 RLWDVSASAEVQKLEF 103 (134)
Q Consensus 88 ~~~d~~~~~~~~~~~~ 103 (134)
.-.|.++|+....+..
T Consensus 273 iALDA~TGk~~W~fg~ 288 (764)
T TIGR03074 273 IALDADTGKLCEDFGN 288 (764)
T ss_pred EEEECCCCCEEEEecC
Confidence 9999999998876643
No 458
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=90.11 E-value=1.1 Score=30.80 Aligned_cols=29 Identities=28% Similarity=0.378 Sum_probs=23.2
Q ss_pred EEEcc----CCcEEEEecCCCeEEEEECCCCCC
Q psy6446 26 VHFAT----DSYRLATGSNDKNIRIYDLNKPDA 54 (134)
Q Consensus 26 ~~~~~----~~~~l~~~~~d~~v~i~~~~~~~~ 54 (134)
..++. +..++++.+.|+.+++||+.++..
T Consensus 220 ~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~ 252 (547)
T PF11715_consen 220 LAVSSSEINDDTFLFTLSRDHTLRIWSLETGQC 252 (547)
T ss_dssp EEE-----ETTTEEEEEETTSEEEEEETTTTCE
T ss_pred EEEecceeCCCCEEEEEeCCCeEEEEECCCCeE
Confidence 55555 678899999999999999998765
No 459
>PHA03098 kelch-like protein; Provisional
Probab=89.88 E-value=4.8 Score=27.68 Aligned_cols=65 Identities=11% Similarity=0.011 Sum_probs=32.4
Q ss_pred CCcEEEEecCC-----CeEEEEECCCCCCCC-eEEeCCCCCEeEEEEeeCCCEEEEeeCC------CcEEEEecCCCce
Q psy6446 31 DSYRLATGSND-----KNIRIYDLNKPDAEP-TVYRGHSSGIKHVQFFKNNTRLISCAED------KTVRLWDVSASAE 97 (134)
Q Consensus 31 ~~~~l~~~~~d-----~~v~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~~~d~~~~~~ 97 (134)
++..++.|+.+ ..+..||..+..-.. ......... .++ ..-+++..+.|+.+ +.+..||..+.+.
T Consensus 342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~-~~~-~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W 418 (534)
T PHA03098 342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYN-PCV-VNVNNLIYVIGGISKNDELLKTVECFSLNTNKW 418 (534)
T ss_pred CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCcc-ceE-EEECCEEEEECCcCCCCcccceEEEEeCCCCee
Confidence 56777777765 246677776533110 000001111 111 12356666666632 3578888876544
No 460
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=89.80 E-value=3.8 Score=26.33 Aligned_cols=99 Identities=15% Similarity=0.177 Sum_probs=58.6
Q ss_pred CceeeEEEccCCcEEEEecCCCe------EEEEECCCCC---CCCe-----EEeCCCC--------CEeEEEEeeCCCEE
Q psy6446 21 IVKSSVHFATDSYRLATGSNDKN------IRIYDLNKPD---AEPT-----VYRGHSS--------GIKHVQFFKNNTRL 78 (134)
Q Consensus 21 ~~~~~~~~~~~~~~l~~~~~d~~------v~i~~~~~~~---~~~~-----~~~~~~~--------~v~~~~~~~~~~~l 78 (134)
..++.+.+.+++..+++.+.+|. +..+++.... .... .+....+ ..-++++.+++.++
T Consensus 20 GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~~ 99 (326)
T PF13449_consen 20 GGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSFW 99 (326)
T ss_pred CcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCEE
Confidence 34566888875566666666666 5555544310 0000 1111111 34478886788888
Q ss_pred EEeeCC------CcEEEEecCCCceeEEEe----------------cCCCCeEEEEccCCcEEE
Q psy6446 79 ISCAED------KTVRLWDVSASAEVQKLE----------------FGAVPNSLEISRDGTTIT 120 (134)
Q Consensus 79 ~~~~~d------~~i~~~d~~~~~~~~~~~----------------~~~~v~~~~~~~~~~~l~ 120 (134)
++.-.+ ..|..++.. ++....+. ......+++++|+|+.|.
T Consensus 100 is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~ 162 (326)
T PF13449_consen 100 ISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLF 162 (326)
T ss_pred EEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEE
Confidence 777667 788888866 55544332 123457899999998444
No 461
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=89.72 E-value=3.6 Score=25.96 Aligned_cols=92 Identities=14% Similarity=0.156 Sum_probs=53.0
Q ss_pred CCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEee------CCCcEEEEecCCCceeEEEe-----cCCCCe
Q psy6446 40 NDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCA------EDKTVRLWDVSASAEVQKLE-----FGAVPN 108 (134)
Q Consensus 40 ~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~d~~i~~~d~~~~~~~~~~~-----~~~~v~ 108 (134)
....+++||....+-. ..-.+-.+.|.++.|..+.+.++.|. ....+..||..+......-. .+.++.
T Consensus 14 ~C~~lC~yd~~~~qW~-~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgpv~ 92 (281)
T PF12768_consen 14 PCPGLCLYDTDNSQWS-SPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGPVT 92 (281)
T ss_pred CCCEEEEEECCCCEee-cCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCcEE
Confidence 3567999998764321 22234567899999986666666553 34468888887654322111 135666
Q ss_pred EEEEcc-CC-cEEEEe----cCCeEEEEeC
Q psy6446 109 SLEISR-DG-TTITVT----HGSCVTFLDA 132 (134)
Q Consensus 109 ~~~~~~-~~-~~l~~~----~~~~i~i~d~ 132 (134)
.+.+.. ++ ++.+.| .+..|..||-
T Consensus 93 a~~~~~~d~~~~~~aG~~~~g~~~l~~~dG 122 (281)
T PF12768_consen 93 ALTFISNDGSNFWVAGRSANGSTFLMKYDG 122 (281)
T ss_pred EEEeeccCCceEEEeceecCCCceEEEEcC
Confidence 676643 33 344433 2245666663
No 462
>KOG4499|consensus
Probab=89.60 E-value=3.4 Score=25.51 Aligned_cols=47 Identities=11% Similarity=-0.003 Sum_probs=36.5
Q ss_pred EEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee
Q psy6446 26 VHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK 73 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~ 73 (134)
++...+|++.++.-+.+.|...|..+++.+. .++-....+++.+|--
T Consensus 217 m~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~-eiklPt~qitsccFgG 263 (310)
T KOG4499|consen 217 MTIDTEGNLYVATFNGGTVQKVDPTTGKILL-EIKLPTPQITSCCFGG 263 (310)
T ss_pred ceEccCCcEEEEEecCcEEEEECCCCCcEEE-EEEcCCCceEEEEecC
Confidence 4446678888888888999999999987654 4555678899999964
No 463
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=89.44 E-value=4.3 Score=26.52 Aligned_cols=98 Identities=15% Similarity=0.040 Sum_probs=53.0
Q ss_pred CceeeEEEccCCcEEEEec-----------CCC-eEEEEECCCCC-C--CCeEEeCCCCCEeEEEEeeCCCEEEEeeCCC
Q psy6446 21 IVKSSVHFATDSYRLATGS-----------NDK-NIRIYDLNKPD-A--EPTVYRGHSSGIKHVQFFKNNTRLISCAEDK 85 (134)
Q Consensus 21 ~~~~~~~~~~~~~~l~~~~-----------~d~-~v~i~~~~~~~-~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 85 (134)
..+. ++|.++|+++++-. ..+ .|.+++-..+. . ....+.........+++.+++ .++ +....
T Consensus 15 ~P~~-ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV-~~~~~ 91 (367)
T TIGR02604 15 NPIA-VCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYV-ATPPD 91 (367)
T ss_pred CCce-eeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEE-eCCCe
Confidence 4455 99999998777643 223 67776643321 1 112333334456889998888 444 34443
Q ss_pred cEEEEecCCC-----ceeEEEe---c-----CCCCeEEEEccCCcEEEE
Q psy6446 86 TVRLWDVSAS-----AEVQKLE---F-----GAVPNSLEISRDGTTITV 121 (134)
Q Consensus 86 ~i~~~d~~~~-----~~~~~~~---~-----~~~v~~~~~~~~~~~l~~ 121 (134)
..++.|.... +....+. . ......+.|.|||.+.++
T Consensus 92 i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~ 140 (367)
T TIGR02604 92 ILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFN 140 (367)
T ss_pred EEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEe
Confidence 3334344321 2111111 1 123678999999976654
No 464
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=89.30 E-value=7.2 Score=28.89 Aligned_cols=78 Identities=17% Similarity=0.198 Sum_probs=50.9
Q ss_pred CCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEE-eeCCC-----cEEEEecCCC-ceeEEEe-cCCCCeEEEE
Q psy6446 41 DKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLIS-CAEDK-----TVRLWDVSAS-AEVQKLE-FGAVPNSLEI 112 (134)
Q Consensus 41 d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~-----~i~~~d~~~~-~~~~~~~-~~~~v~~~~~ 112 (134)
.+.+.+-|...... ......+..++.+.+|||||+.++- .+-++ .|.+-|+.+. .-+..+. ....|..-..
T Consensus 328 ~~~L~~~D~dG~n~-~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aaiprwrv 406 (912)
T TIGR02171 328 TGNLAYIDYTKGAS-RAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAAIPRWRV 406 (912)
T ss_pred CCeEEEEecCCCCc-eEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccccccceEe
Confidence 35788888776443 2222456788999999999999986 33333 4788888753 2223343 3566777777
Q ss_pred ccCCcEE
Q psy6446 113 SRDGTTI 119 (134)
Q Consensus 113 ~~~~~~l 119 (134)
.++|..+
T Consensus 407 ~e~gdt~ 413 (912)
T TIGR02171 407 LENGDTV 413 (912)
T ss_pred cCCCCeE
Confidence 7877543
No 465
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=88.98 E-value=1 Score=18.63 Aligned_cols=29 Identities=17% Similarity=0.197 Sum_probs=23.3
Q ss_pred EEEEeeCCCcEEEEecCCCceeEEEecCC
Q psy6446 77 RLISCAEDKTVRLWDVSASAEVQKLEFGA 105 (134)
Q Consensus 77 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 105 (134)
.++.+..+|.+.-.|.++|+.+.......
T Consensus 2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~~~ 30 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKTGKVLWKFQTGP 30 (38)
T ss_dssp EEEEETTTSEEEEEETTTTSEEEEEESSS
T ss_pred EEEEeCCCCEEEEEECCCCCEEEeeeCCC
Confidence 34566889999999999999998887543
No 466
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=88.16 E-value=4.5 Score=25.15 Aligned_cols=68 Identities=13% Similarity=0.134 Sum_probs=47.6
Q ss_pred CCCEeEEEEeeC-------CCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeE----EEEc-cCCcEEEEecCCeEEEE
Q psy6446 63 SSGIKHVQFFKN-------NTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNS----LEIS-RDGTTITVTHGSCVTFL 130 (134)
Q Consensus 63 ~~~v~~~~~~~~-------~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~----~~~~-~~~~~l~~~~~~~i~i~ 130 (134)
...|++|+--+. -..|+.|.+++.|.+.|.............+.... -.|. -|.+.++++.||.|.+.
T Consensus 176 ~t~ITcm~tikk~~~d~~a~scLViGTE~~~i~iLd~~af~il~~~~lpsvPv~i~~~G~~devdyRI~Va~Rdg~iy~i 255 (257)
T PF14779_consen 176 QTVITCMATIKKSSADEDAVSCLVIGTESGEIYILDPQAFTILKQVQLPSVPVFISVSGQYDEVDYRIVVACRDGKIYTI 255 (257)
T ss_pred CceeEEeeeecccccCCCCcceEEEEecCCeEEEECchhheeEEEEecCCCceEEEEEeeeeccceEEEEEeCCCEEEEE
Confidence 446788775431 14688999999999999988777777765544322 2344 56677778899988753
No 467
>COG4880 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats [General function prediction only]
Probab=88.05 E-value=6.3 Score=26.64 Aligned_cols=87 Identities=18% Similarity=0.129 Sum_probs=48.2
Q ss_pred CCceeeEEe--eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEee--CCCEEEEeeCC
Q psy6446 9 SGEELHSFQ--HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFK--NNTRLISCAED 84 (134)
Q Consensus 9 ~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d 84 (134)
.+..+-.++ ..+.-+-++.|..|--++++--.-.-+.+.|+..++.+. .+-.-.-+=.+--.+| +++.|-.|..+
T Consensus 414 ~lnvvGkltGl~~gERIYAvRf~gdv~yiVTfrqtDPlfviDlsNPenPk-vlGeLKIPGfS~YLHpigen~~lGvG~~~ 492 (603)
T COG4880 414 NLNVVGKLTGLAPGERIYAVRFVGDVLYIVTFRQTDPLFVIDLSNPENPK-VLGELKIPGFSEYLHPIGENRLLGVGAYQ 492 (603)
T ss_pred CCcEEEEEeccCCCceEEEEEEeCceEEEEEEeccCceEEEEcCCCCCCc-eeEEEecCCchhhccccCCCcEEEeeccc
Confidence 345555555 233344448887766667776665678888988876553 2211111112222345 34455566666
Q ss_pred Cc--EEEEecCCCc
Q psy6446 85 KT--VRLWDVSASA 96 (134)
Q Consensus 85 ~~--i~~~d~~~~~ 96 (134)
|. |.+||+.+..
T Consensus 493 g~vKiSLFdiSdl~ 506 (603)
T COG4880 493 GGVKISLFDISDLA 506 (603)
T ss_pred CCceEEEEeccCCC
Confidence 64 6788887543
No 468
>PRK13684 Ycf48-like protein; Provisional
Probab=87.98 E-value=5.4 Score=25.78 Aligned_cols=108 Identities=8% Similarity=0.019 Sum_probs=60.6
Q ss_pred ceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCe-EE--eCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCcee
Q psy6446 22 VKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPT-VY--RGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEV 98 (134)
Q Consensus 22 ~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~-~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 98 (134)
.+..+.+.++++.++++ ..|.+.+=..+.+..-.. .. ......+..+.+.+++.. +.++.+|.+.. ....++.-
T Consensus 216 ~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~-~~~G~~G~v~~-S~d~G~tW 292 (334)
T PRK13684 216 RLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGEI-WAGGGNGTLLV-SKDGGKTW 292 (334)
T ss_pred cceeeeEcCCCCEEEEe-cCCEEEEccCCCCCccccccCCccccccceeeEEEcCCCCE-EEEcCCCeEEE-eCCCCCCC
Confidence 34447788888776665 457665322232221110 00 011234678888887664 44556665543 33334433
Q ss_pred EEEe----cCCCCeEEEEccCCcEEEEecCCeEEEEeC
Q psy6446 99 QKLE----FGAVPNSLEISRDGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 99 ~~~~----~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~ 132 (134)
.... .......+.|..+++.++++..|.|..|+-
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~il~~~~ 330 (334)
T PRK13684 293 EKDPVGEEVPSNFYKIVFLDPEKGFVLGQRGVLLRYVG 330 (334)
T ss_pred eECCcCCCCCcceEEEEEeCCCceEEECCCceEEEecC
Confidence 3322 123466788877888888888899988763
No 469
>KOG1900|consensus
Probab=87.61 E-value=4.8 Score=30.83 Aligned_cols=88 Identities=17% Similarity=0.246 Sum_probs=51.3
Q ss_pred cCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEE--------eeCCCEEEEeeCCCcEEEEecCC----Cce-----eEEE
Q psy6446 39 SNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQF--------FKNNTRLISCAEDKTVRLWDVSA----SAE-----VQKL 101 (134)
Q Consensus 39 ~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~--------~~~~~~l~~~~~d~~i~~~d~~~----~~~-----~~~~ 101 (134)
+.|+.+.+|++.++... ..+.+-...|..+.. .|.=++++..+.--.|.++-+.. +.. ...+
T Consensus 96 TiDn~L~lWny~~~~e~-~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i 174 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESDNEL-AEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKI 174 (1311)
T ss_pred EeCCeEEEEEcCCCCcc-ccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceee
Confidence 35788999999985433 344555555555543 23334555444444455554321 111 0122
Q ss_pred ec-CCCCeEEEEccCCcEEEEecCCeE
Q psy6446 102 EF-GAVPNSLEISRDGTTITVTHGSCV 127 (134)
Q Consensus 102 ~~-~~~v~~~~~~~~~~~l~~~~~~~i 127 (134)
.. +..|.++....+|+.+.+|.||.|
T Consensus 175 ~~dg~~V~~I~~t~nGRIF~~G~dg~l 201 (1311)
T KOG1900|consen 175 SVDGVSVNCITYTENGRIFFAGRDGNL 201 (1311)
T ss_pred ecCCceEEEEEeccCCcEEEeecCCCE
Confidence 22 456788988889999999988844
No 470
>KOG3616|consensus
Probab=87.58 E-value=1.9 Score=31.22 Aligned_cols=34 Identities=9% Similarity=0.160 Sum_probs=28.1
Q ss_pred CCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCce
Q psy6446 64 SGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAE 97 (134)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 97 (134)
..+.+++-+|.++.++.+..||.|.+|+....+.
T Consensus 15 e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~q 48 (1636)
T KOG3616|consen 15 EFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQ 48 (1636)
T ss_pred ceeeeeeecCCCceEEEEecCCcEEEEeecccch
Confidence 4467778789999999999999999999865544
No 471
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=87.36 E-value=2.6 Score=21.51 Aligned_cols=36 Identities=11% Similarity=0.030 Sum_probs=24.6
Q ss_pred eeEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEe
Q psy6446 2 GTVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATG 38 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 38 (134)
+..||..+++....+.+-..... ++.++|+..++.+
T Consensus 39 ll~ydp~t~~~~vl~~~L~fpNG-Vals~d~~~vlv~ 74 (89)
T PF03088_consen 39 LLRYDPSTKETTVLLDGLYFPNG-VALSPDESFVLVA 74 (89)
T ss_dssp EEEEETTTTEEEEEEEEESSEEE-EEE-TTSSEEEEE
T ss_pred EEEEECCCCeEEEehhCCCccCe-EEEcCCCCEEEEE
Confidence 45688888776555555555555 9999999977665
No 472
>KOG1520|consensus
Probab=86.50 E-value=7.2 Score=25.71 Aligned_cols=48 Identities=21% Similarity=0.201 Sum_probs=28.8
Q ss_pred CCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEecC--CeEEEE
Q psy6446 83 EDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVTHG--SCVTFL 130 (134)
Q Consensus 83 ~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~i~i~ 130 (134)
.+|.+.-||..+......+..-.-.+.++.+||+.+++.+.. ..|+-|
T Consensus 197 ~~GRl~~YD~~tK~~~VLld~L~F~NGlaLS~d~sfvl~~Et~~~ri~ry 246 (376)
T KOG1520|consen 197 PTGRLFRYDPSTKVTKVLLDGLYFPNGLALSPDGSFVLVAETTTARIKRY 246 (376)
T ss_pred CccceEEecCcccchhhhhhcccccccccCCCCCCEEEEEeeccceeeee
Confidence 345666666555443333333345678999999999887642 344433
No 473
>KOG2247|consensus
Probab=86.47 E-value=0.36 Score=32.54 Aligned_cols=74 Identities=19% Similarity=0.227 Sum_probs=50.9
Q ss_pred eeEeecCCCceeeEEe-eCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeC-CCCCEeEEEEeeCCCEE
Q psy6446 2 GTVWDAVSGEELHSFQ-HPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRG-HSSGIKHVQFFKNNTRL 78 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l 78 (134)
+.+||+.+.. ..+++ +....-+-+.|++....++.+...|.+.+++..+...... .| |...+.+.++.+.+..+
T Consensus 99 iylwd~n~ey-tqqLE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv--~Gkh~RRgtq~av~lEd~vi 174 (615)
T KOG2247|consen 99 IYLWDVNSEY-TQQLESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIV--MGKHQRRGTQIAVTLEDYVI 174 (615)
T ss_pred eeechhhhhh-HHHHhccCcchHHHHhhccCCccccccccccceEEEeccchhhhhh--hcccccceeEEEecccceee
Confidence 5678876432 22333 2223333378999888999999999999999887554432 34 88889999998866544
No 474
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=86.27 E-value=1.3 Score=16.93 Aligned_cols=23 Identities=9% Similarity=0.138 Sum_probs=11.6
Q ss_pred eEEEEeeCCCEEEEeeCCCcEEE
Q psy6446 67 KHVQFFKNNTRLISCAEDKTVRL 89 (134)
Q Consensus 67 ~~~~~~~~~~~l~~~~~d~~i~~ 89 (134)
..+++.++|+.+++-.....|.+
T Consensus 5 ~gvav~~~g~i~VaD~~n~rV~v 27 (28)
T PF01436_consen 5 HGVAVDSDGNIYVADSGNHRVQV 27 (28)
T ss_dssp EEEEEETTSEEEEEECCCTEEEE
T ss_pred cEEEEeCCCCEEEEECCCCEEEE
Confidence 45555555555555444444443
No 475
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=85.82 E-value=9.1 Score=26.20 Aligned_cols=125 Identities=17% Similarity=0.117 Sum_probs=59.5
Q ss_pred eEeecCCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCC---CEeEEEEeeCCCEEE
Q psy6446 3 TVWDAVSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSS---GIKHVQFFKNNTRLI 79 (134)
Q Consensus 3 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~ 79 (134)
.++|. .|.....+.........+..-++|.+++... +.+..+|+.. + ......-..+ .-..+...|+|++|+
T Consensus 131 ~~iD~-~G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~--~~~~e~D~~G-~-v~~~~~l~~~~~~~HHD~~~l~nGn~L~ 205 (477)
T PF05935_consen 131 YLIDN-NGDVRWYLPLDSGSDNSFKQLPNGNLLIGSG--NRLYEIDLLG-K-VIWEYDLPGGYYDFHHDIDELPNGNLLI 205 (477)
T ss_dssp EEEET-TS-EEEEE-GGGT--SSEEE-TTS-EEEEEB--TEEEEE-TT----EEEEEE--TTEE-B-S-EEE-TTS-EEE
T ss_pred EEECC-CccEEEEEccCccccceeeEcCCCCEEEecC--CceEEEcCCC-C-EEEeeecCCcccccccccEECCCCCEEE
Confidence 45563 4666666653322222255667888776655 6777788753 2 1122211111 124566778888888
Q ss_pred EeeC-------------CCcEEEEecCCCceeEEEec--------C--------------------CCCeEEEEcc-CCc
Q psy6446 80 SCAE-------------DKTVRLWDVSASAEVQKLEF--------G--------------------AVPNSLEISR-DGT 117 (134)
Q Consensus 80 ~~~~-------------d~~i~~~d~~~~~~~~~~~~--------~--------------------~~v~~~~~~~-~~~ 117 (134)
.+.. +-.|...| .+|+.+..+.. . .-++++.+.+ ++.
T Consensus 206 l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd~~dd~ 284 (477)
T PF05935_consen 206 LASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYDPSDDS 284 (477)
T ss_dssp EEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEETTTTE
T ss_pred EEeecccccCCCCccEecCEEEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEeCCCCe
Confidence 7661 11355566 66666555441 0 1247888888 556
Q ss_pred EEEEecC-CeEEEEeCC
Q psy6446 118 TITVTHG-SCVTFLDAN 133 (134)
Q Consensus 118 ~l~~~~~-~~i~i~d~~ 133 (134)
+++++.. ..|...|.+
T Consensus 285 iivSsR~~s~V~~Id~~ 301 (477)
T PF05935_consen 285 IIVSSRHQSAVIKIDYR 301 (477)
T ss_dssp EEEEETTT-EEEEEE-T
T ss_pred EEEEcCcceEEEEEECC
Confidence 6666754 577777743
No 476
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=84.67 E-value=9.9 Score=25.63 Aligned_cols=103 Identities=17% Similarity=0.236 Sum_probs=57.7
Q ss_pred CCcEEEEecCCCeEEEEECCCCCCC-Ce--EEeCCCCCEeEEEEee----CCCEEEEeeCCCcEEEEecCC--Cc-----
Q psy6446 31 DSYRLATGSNDKNIRIYDLNKPDAE-PT--VYRGHSSGIKHVQFFK----NNTRLISCAEDKTVRLWDVSA--SA----- 96 (134)
Q Consensus 31 ~~~~l~~~~~d~~v~i~~~~~~~~~-~~--~~~~~~~~v~~~~~~~----~~~~l~~~~~d~~i~~~d~~~--~~----- 96 (134)
+...|++|+..|.++||+....... .. ....-..+|.++..-+ .....++.-.-+.+.+|.+.. +.
T Consensus 36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~ 115 (418)
T PF14727_consen 36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGN 115 (418)
T ss_pred CccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCc
Confidence 3468999999999999998653311 11 1123346777777532 233344556667788887732 11
Q ss_pred ee---EEEec--CCCCeEEEEcc----CC-cEEEE-ecCCeEEEEeCC
Q psy6446 97 EV---QKLEF--GAVPNSLEISR----DG-TTITV-THGSCVTFLDAN 133 (134)
Q Consensus 97 ~~---~~~~~--~~~v~~~~~~~----~~-~~l~~-~~~~~i~i~d~~ 133 (134)
.. ..+.| ......++.-| .+ .++++ +.||.+.+|+-+
T Consensus 116 ~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe 163 (418)
T PF14727_consen 116 QYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQE 163 (418)
T ss_pred EEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCC
Confidence 11 11112 23334444444 22 34444 679999999854
No 477
>PHA02790 Kelch-like protein; Provisional
Probab=84.58 E-value=11 Score=25.87 Aligned_cols=66 Identities=6% Similarity=-0.106 Sum_probs=32.6
Q ss_pred cCCcEEEEecCC--CeEEEEECCCCCCCCeEEeCCCCCEeE-EEEeeCCCEEEEeeCCC---cEEEEecCCCce
Q psy6446 30 TDSYRLATGSND--KNIRIYDLNKPDAEPTVYRGHSSGIKH-VQFFKNNTRLISCAEDK---TVRLWDVSASAE 97 (134)
Q Consensus 30 ~~~~~l~~~~~d--~~v~i~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~d~---~i~~~d~~~~~~ 97 (134)
-++...+.|+.+ ..+..||..+..- .....-..+... ....-+++..+.|+.++ .+..||..+.+.
T Consensus 317 ~~~~iYviGG~~~~~sve~ydp~~n~W--~~~~~l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W 388 (480)
T PHA02790 317 ANNKLYVVGGLPNPTSVERWFHGDAAW--VNMPSLLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQW 388 (480)
T ss_pred ECCEEEEECCcCCCCceEEEECCCCeE--EECCCCCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEE
Confidence 356677777754 3567787654321 111111111111 11223666667776543 467788766543
No 478
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=83.81 E-value=4.2 Score=20.64 Aligned_cols=29 Identities=17% Similarity=0.266 Sum_probs=23.3
Q ss_pred CCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 105 AVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 105 ~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
...+.+.++|+++++..+ ..+.|++|..+
T Consensus 54 ~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~ 84 (86)
T PF01731_consen 54 SFANGIAISPDKKYLYVASSLAHSIHVYKRH 84 (86)
T ss_pred CCCceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence 456789999999888765 46899999865
No 479
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=83.53 E-value=9.2 Score=24.38 Aligned_cols=57 Identities=11% Similarity=0.102 Sum_probs=37.2
Q ss_pred CCEEEEeeCCCcEEEEecCCC-ceeEEEecCCCCeEEEEccCCcEEEEecC--CeEEEEeC
Q psy6446 75 NTRLISCAEDKTVRLWDVSAS-AEVQKLEFGAVPNSLEISRDGTTITVTHG--SCVTFLDA 132 (134)
Q Consensus 75 ~~~l~~~~~d~~i~~~d~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~i~i~d~ 132 (134)
+++++.|.++|. .+.+.... .....+.....|.++...+.-..+++=.+ ..++.+++
T Consensus 13 ~~~lL~GTe~Gl-y~~~~~~~~~~~~kl~~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L 72 (302)
T smart00036 13 GKWLLVGTEEGL-YVLNISDQPGTLEKLIGRRSVTQIWVLEENNVLLMISGKKPQLYSHPL 72 (302)
T ss_pred CcEEEEEeCCce-EEEEcccCCCCeEEecCcCceEEEEEEhhhCEEEEEeCCcceEEEEEH
Confidence 358888888885 44445432 23344445668889998887776665333 45999887
No 480
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=83.36 E-value=9.7 Score=24.55 Aligned_cols=108 Identities=12% Similarity=0.151 Sum_probs=63.8
Q ss_pred eEEEccCCcEEEEecCCCeEEEEECCC------CCCCCeEEeC-----CCCCEeEEEEeeCCC------------EEEEe
Q psy6446 25 SVHFATDSYRLATGSNDKNIRIYDLNK------PDAEPTVYRG-----HSSGIKHVQFFKNNT------------RLISC 81 (134)
Q Consensus 25 ~~~~~~~~~~l~~~~~d~~v~i~~~~~------~~~~~~~~~~-----~~~~v~~~~~~~~~~------------~l~~~ 81 (134)
-++++|.+.+-++....+...+||... ...+...... .....+.+.|+.... .++.+
T Consensus 27 Gia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fif~ 106 (336)
T TIGR03118 27 GLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFLFV 106 (336)
T ss_pred eeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEEEE
Confidence 388899887777777778899999862 1111111221 123566666664322 25678
Q ss_pred eCCCcEEEEecCCCce-----eEEEec--CCCC-eEEEEccC--CcEEEEe--cCCeEEEEeC
Q psy6446 82 AEDKTVRLWDVSASAE-----VQKLEF--GAVP-NSLEISRD--GTTITVT--HGSCVTFLDA 132 (134)
Q Consensus 82 ~~d~~i~~~d~~~~~~-----~~~~~~--~~~v-~~~~~~~~--~~~l~~~--~~~~i~i~d~ 132 (134)
++||+|.-|...-+.. ...+.. ...+ ..+++... +.+|.+. .+++|-+||-
T Consensus 107 tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~ 169 (336)
T TIGR03118 107 TEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKG 169 (336)
T ss_pred eCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecC
Confidence 8999999998543222 112221 1223 45666544 4666655 5799999884
No 481
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=83.09 E-value=15 Score=26.64 Aligned_cols=70 Identities=16% Similarity=0.289 Sum_probs=48.2
Q ss_pred eeeEEEc--cCCcEEEEecCCCeEEEEECCCCC-C-CCeEEeCCCCCEeEEEEeeCC---C---EEEEeeCCCcEEEEec
Q psy6446 23 KSSVHFA--TDSYRLATGSNDKNIRIYDLNKPD-A-EPTVYRGHSSGIKHVQFFKNN---T---RLISCAEDKTVRLWDV 92 (134)
Q Consensus 23 ~~~~~~~--~~~~~l~~~~~d~~v~i~~~~~~~-~-~~~~~~~~~~~v~~~~~~~~~---~---~l~~~~~d~~i~~~d~ 92 (134)
...++++ ...++||++++...|.+|-+.... + ....-..+...|.+++|.++. . ++++++-.|.+.+|++
T Consensus 166 aWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 166 AWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred eeEEEEEecCcceEEEEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 3347777 778889999998888887765521 1 111112356678899998743 2 6777888999888887
No 482
>PRK13615 lipoprotein LpqB; Provisional
Probab=81.59 E-value=16 Score=25.75 Aligned_cols=99 Identities=14% Similarity=0.118 Sum_probs=58.9
Q ss_pred eEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCC-CceeEEEe-
Q psy6446 25 SVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSA-SAEVQKLE- 102 (134)
Q Consensus 25 ~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~-~~~~~~~~- 102 (134)
+.+.++++..++....++.+.++..... ..... .......-.|.+++ ++.+.......++..... +... ...
T Consensus 338 s~avS~dg~~~A~v~~~~~l~vg~~~~~--~~~~~--~~~~Lt~PS~d~~g-~vWtv~~g~~~~l~~~~~~G~~~-~v~v 411 (557)
T PRK13615 338 AATLSADGRQAAVRNASGVWSVGDGDRD--AVLLD--TRPGLVAPSLDAQG-YVWSTPASDPRGLVAWGPDGVGH-PVAV 411 (557)
T ss_pred cceEcCCCceEEEEcCCceEEEecCCCc--ceeec--cCCccccCcCcCCC-CEEEEeCCCceEEEEecCCCceE-Eeec
Confidence 4788899999888877777777765521 11111 12346777787777 666655433444444322 3332 222
Q ss_pred ---cCCCCeEEEEccCCcEEEE-e---cCCeEEE
Q psy6446 103 ---FGAVPNSLEISRDGTTITV-T---HGSCVTF 129 (134)
Q Consensus 103 ---~~~~v~~~~~~~~~~~l~~-~---~~~~i~i 129 (134)
.+..|..+..|+||..++. . ..++|.+
T Consensus 412 ~~~~~~~I~~lrvSrDG~R~Avi~~~~g~~~V~v 445 (557)
T PRK13615 412 SWTATGRVVSLEVARDGARVLVQLETGAGPQLLV 445 (557)
T ss_pred cccCCCeeEEEEeCCCccEEEEEEecCCCCEEEE
Confidence 2457999999999966553 2 2356655
No 483
>PRK10115 protease 2; Provisional
Probab=81.52 E-value=18 Score=26.22 Aligned_cols=88 Identities=13% Similarity=0.134 Sum_probs=49.0
Q ss_pred eeEeecCCCceeeE-EeeCCCceeeEEEccCCcEEEEecCC------CeEEEEECCCCCC-CCeEEeCCCCCEe-EEEEe
Q psy6446 2 GTVWDAVSGEELHS-FQHPHIVKSSVHFATDSYRLATGSND------KNIRIYDLNKPDA-EPTVYRGHSSGIK-HVQFF 72 (134)
Q Consensus 2 i~v~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~d------~~v~i~~~~~~~~-~~~~~~~~~~~v~-~~~~~ 72 (134)
|++.|+.+|+.+.. +... ... +.|.+|++.|+....+ ..++.+++.++.. ....+.+...... ....+
T Consensus 155 l~v~d~~tg~~l~~~i~~~--~~~-~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s 231 (686)
T PRK10115 155 IRFRNLETGNWYPELLDNV--EPS-FVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKT 231 (686)
T ss_pred EEEEECCCCCCCCccccCc--ceE-EEEeeCCCEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEc
Confidence 56777777764322 2121 134 9999998877665432 3678888887632 2223443333333 22233
Q ss_pred eCCCEEEEeeC---CCcEEEEec
Q psy6446 73 KNNTRLISCAE---DKTVRLWDV 92 (134)
Q Consensus 73 ~~~~~l~~~~~---d~~i~~~d~ 92 (134)
.++++++..+. ++.+.+++.
T Consensus 232 ~d~~~l~i~~~~~~~~~~~l~~~ 254 (686)
T PRK10115 232 TSKHYVVIHLASATTSEVLLLDA 254 (686)
T ss_pred CCCCEEEEEEECCccccEEEEEC
Confidence 37777664333 356888884
No 484
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=80.52 E-value=13 Score=24.10 Aligned_cols=47 Identities=11% Similarity=-0.005 Sum_probs=34.8
Q ss_pred CCCEEEEeeCCCcEEEEecCCCceeEEEecCCCCeEEEEccCCcEEEEe
Q psy6446 74 NNTRLISCAEDKTVRLWDVSASAEVQKLEFGAVPNSLEISRDGTTITVT 122 (134)
Q Consensus 74 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 122 (134)
+++..++-+..|.+.-+|..+|+.......++...++.|. |.++++|
T Consensus 212 dgrLwvldsgtGev~~vD~~~G~~e~Va~vpG~~rGL~f~--G~llvVg 258 (335)
T TIGR03032 212 QGKLWLLNSGRGELGYVDPQAGKFQPVAFLPGFTRGLAFA--GDFAFVG 258 (335)
T ss_pred CCeEEEEECCCCEEEEEcCCCCcEEEEEECCCCCccccee--CCEEEEE
Confidence 4556666666778888887777766666677888899998 7777665
No 485
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=80.48 E-value=12 Score=23.84 Aligned_cols=39 Identities=23% Similarity=0.136 Sum_probs=32.9
Q ss_pred CEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEec
Q psy6446 65 GIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLEF 103 (134)
Q Consensus 65 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 103 (134)
.++++...++|.+|++...-..|.+.|-++++.+..+..
T Consensus 145 HiNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG 183 (299)
T PF14269_consen 145 HINSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGG 183 (299)
T ss_pred EeeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCC
Confidence 367888888899999998888999999999988887753
No 486
>KOG3616|consensus
Probab=79.79 E-value=9.4 Score=28.04 Aligned_cols=94 Identities=10% Similarity=0.168 Sum_probs=53.1
Q ss_pred CCCceeeEEeeCCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeCCCcE
Q psy6446 8 VSGEELHSFQHPHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAEDKTV 87 (134)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 87 (134)
-.|.....+.|.+.+-. +..+..+..|+.-...-.+.++|+.+-... ++ -+-.+.+.|.|....++..+.|+..
T Consensus 326 i~g~~~~~inh~~~vdw-ielne~~~kllfrdkk~kl~l~di~s~qks--mi---lnfcsymqwvp~sdvivaqn~dnl~ 399 (1636)
T KOG3616|consen 326 IGGQNEGFINHEGAVDW-IELNERAHKLLFRDKKLKLHLVDIESCQKS--MI---LNFCSYMQWVPGSDVIVAQNGDNLC 399 (1636)
T ss_pred ccCcccccccccccccc-eeccchhhhhhcccccceeEEEEcccchHH--HH---HHHhhhheeccCcceEEecCCCceE
Confidence 33444444444444444 555555556666555667777787653321 11 1234678899988888887777644
Q ss_pred EEEecCCCceeEEEecCCCC
Q psy6446 88 RLWDVSASAEVQKLEFGAVP 107 (134)
Q Consensus 88 ~~~d~~~~~~~~~~~~~~~v 107 (134)
.-|++.-++.+..+.-.+.|
T Consensus 400 iwyn~d~peqvt~~kikgdv 419 (1636)
T KOG3616|consen 400 IWYNIDAPEQVTMFKIKGDV 419 (1636)
T ss_pred EEecCCcchhheeeEecccc
Confidence 44466655555555543333
No 487
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=79.74 E-value=17 Score=24.82 Aligned_cols=108 Identities=12% Similarity=0.167 Sum_probs=52.6
Q ss_pred EEEccCCcEEEEecC--------------------CCeEEEEECCCCCCCCeEEeCCC-CCEeEEEEeeC--CCE-EEEe
Q psy6446 26 VHFATDSYRLATGSN--------------------DKNIRIYDLNKPDAEPTVYRGHS-SGIKHVQFFKN--NTR-LISC 81 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~--------------------d~~v~i~~~~~~~~~~~~~~~~~-~~v~~~~~~~~--~~~-l~~~ 81 (134)
+.+.|..+.+++... -..+.+||+.+.+.....-.+.. ..+..+.|..+ ..+ ++.+
T Consensus 186 fw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~ 265 (461)
T PF05694_consen 186 FWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGC 265 (461)
T ss_dssp EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEE
T ss_pred eEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEE
Confidence 667777777776532 35799999998654332222322 24567777653 333 3333
Q ss_pred eCCCcEEEE-ecCCCcee----EEEec------------------CCCCeEEEEccCCcEEEEe--cCCeEEEEeCC
Q psy6446 82 AEDKTVRLW-DVSASAEV----QKLEF------------------GAVPNSLEISRDGTTITVT--HGSCVTFLDAN 133 (134)
Q Consensus 82 ~~d~~i~~~-d~~~~~~~----~~~~~------------------~~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~ 133 (134)
.-...|..| ....++.. -.+.. ..-++.+.+|.|.++|..+ ..|.|+.||+.
T Consensus 266 aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDIS 342 (461)
T PF05694_consen 266 ALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDIS 342 (461)
T ss_dssp E--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-S
T ss_pred eccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecC
Confidence 344444444 32333211 11110 2346889999999999876 47999999984
No 488
>PF14339 DUF4394: Domain of unknown function (DUF4394)
Probab=78.96 E-value=13 Score=22.98 Aligned_cols=77 Identities=13% Similarity=0.056 Sum_probs=46.3
Q ss_pred CCCceeeEEEccCCcEEEEecCCCeEEEEECCCCCCCCe----EEeCCCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCC
Q psy6446 19 PHIVKSSVHFATDSYRLATGSNDKNIRIYDLNKPDAEPT----VYRGHSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSA 94 (134)
Q Consensus 19 ~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 94 (134)
.+..+. +.|.|....|+.-+..+.++..|..++..... .-..-.+....++|+|--..|=..+.+++-...+..+
T Consensus 26 ge~l~G-ID~Rpa~G~LYgl~~~g~lYtIn~~tG~aT~vg~s~~~~al~g~~~gvDFNP~aDRlRvvs~~GqNlR~npdt 104 (236)
T PF14339_consen 26 GESLVG-IDFRPANGQLYGLGSTGRLYTINPATGAATPVGASPLTVALSGTAFGVDFNPAADRLRVVSNTGQNLRLNPDT 104 (236)
T ss_pred CCeEEE-EEeecCCCCEEEEeCCCcEEEEECCCCeEEEeecccccccccCceEEEecCcccCcEEEEccCCcEEEECCCC
Confidence 445555 99999544555556678888888887652111 1112234478899999655554445555555555555
Q ss_pred Cc
Q psy6446 95 SA 96 (134)
Q Consensus 95 ~~ 96 (134)
+.
T Consensus 105 Ga 106 (236)
T PF14339_consen 105 GA 106 (236)
T ss_pred CC
Confidence 54
No 489
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=78.40 E-value=15 Score=25.59 Aligned_cols=20 Identities=35% Similarity=0.292 Sum_probs=16.6
Q ss_pred cCCCCeEEEEccCCcEEEEe
Q psy6446 103 FGAVPNSLEISRDGTTITVT 122 (134)
Q Consensus 103 ~~~~v~~~~~~~~~~~l~~~ 122 (134)
...+++.++|+||++.|++.
T Consensus 500 ~gaE~tG~~fspDg~tlFvn 519 (524)
T PF05787_consen 500 NGAEITGPCFSPDGRTLFVN 519 (524)
T ss_pred CCcccccceECCCCCEEEEE
Confidence 46788999999999988764
No 490
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=78.33 E-value=18 Score=24.31 Aligned_cols=105 Identities=7% Similarity=-0.030 Sum_probs=61.8
Q ss_pred eeeEEEccCCcEEEEecCCCeEEEEECCCCCC----CCeEEeC--CCCCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCc
Q psy6446 23 KSSVHFATDSYRLATGSNDKNIRIYDLNKPDA----EPTVYRG--HSSGIKHVQFFKNNTRLISCAEDKTVRLWDVSASA 96 (134)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~----~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 96 (134)
+..+.+.+++..++++ ..|.+.. ....+.. ....... ....+..+.|.+++. ++.++..|.+.... ..++
T Consensus 283 l~~v~~~~dg~l~l~g-~~G~l~~-S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~-~~a~G~~G~v~~s~-D~G~ 358 (398)
T PLN00033 283 IQNMGWRADGGLWLLT-RGGGLYV-SKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKE-AWAAGGSGILLRST-DGGK 358 (398)
T ss_pred eeeeeEcCCCCEEEEe-CCceEEE-ecCCCCcccccceeecccCCCCcceEEEEEcCCCc-EEEEECCCcEEEeC-CCCc
Confidence 3448888888777666 4555443 2222221 1111111 123478888886655 45556677665553 3444
Q ss_pred eeEEEe----cCCCCeEEEEccCCcEEEEecCCeEEEEe
Q psy6446 97 EVQKLE----FGAVPNSLEISRDGTTITVTHGSCVTFLD 131 (134)
Q Consensus 97 ~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~i~i~d 131 (134)
.-.... .......+.|.++++.++.+.+|.|..|.
T Consensus 359 tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G~~G~il~~~ 397 (398)
T PLN00033 359 SWKRDKGADNIAANLYSVKFFDDKKGFVLGNDGVLLRYL 397 (398)
T ss_pred ceeEccccCCCCcceeEEEEcCCCceEEEeCCcEEEEeC
Confidence 433322 23457799998888999999999887663
No 491
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=77.61 E-value=20 Score=24.65 Aligned_cols=102 Identities=15% Similarity=0.188 Sum_probs=0.0
Q ss_pred ccCCcEEEEecCCCeEEEEECCCCC-CCCeEEeCC-CCCEeEEEEeeCC-CEEEEeeC--CCcEEEEecCCCceeEEEec
Q psy6446 29 ATDSYRLATGSNDKNIRIYDLNKPD-AEPTVYRGH-SSGIKHVQFFKNN-TRLISCAE--DKTVRLWDVSASAEVQKLEF 103 (134)
Q Consensus 29 ~~~~~~l~~~~~d~~v~i~~~~~~~-~~~~~~~~~-~~~v~~~~~~~~~-~~l~~~~~--d~~i~~~d~~~~~~~~~~~~ 103 (134)
..++..++.+..+|.+....+.... ......-+. .....++.+..++ .+++.|+. |+.+..+....-+....+..
T Consensus 219 ~~~~~~~lL~~e~G~l~~l~l~~~~~~i~i~~~g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~l~~~~~~~N 298 (504)
T PF10433_consen 219 DKDGDRILLQDEDGDLYLLTLDNDGGSISITYLGTLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSNLEVLDSLPN 298 (504)
T ss_dssp STTSSEEEEEETTSEEEEEEEEEEEEEEEEEEEEE--S-ESEEEEESTT--EEEEEESSS-EEEEEEESESEEEEEEE--
T ss_pred cCCCCEEEEEeCCCeEEEEEEEECCCeEEEEEcCCcCChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCCcEEEEeccC
Q ss_pred CCCCeEEEEccCC-----------cEEEEec---CCeEEEE
Q psy6446 104 GAVPNSLEISRDG-----------TTITVTH---GSCVTFL 130 (134)
Q Consensus 104 ~~~v~~~~~~~~~-----------~~l~~~~---~~~i~i~ 130 (134)
-+++..+++.+.. +.+++++ +|.+++.
T Consensus 299 ~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~l 339 (504)
T PF10433_consen 299 WGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRIL 339 (504)
T ss_dssp --SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEE
T ss_pred cCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEE
No 492
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=77.05 E-value=20 Score=24.27 Aligned_cols=59 Identities=12% Similarity=0.211 Sum_probs=35.9
Q ss_pred CCCEEEEeeCCCcEEEEecCCCc-----eeEEEecCCCCeEEEEcc-----CCcEEEEecCCeEEEEeC
Q psy6446 74 NNTRLISCAEDKTVRLWDVSASA-----EVQKLEFGAVPNSLEISR-----DGTTITVTHGSCVTFLDA 132 (134)
Q Consensus 74 ~~~~l~~~~~d~~i~~~d~~~~~-----~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~~~i~i~d~ 132 (134)
+...++.|+..|.++||+..... .+.....+.+|..+...+ +...|++=.-..+.+|.+
T Consensus 36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v 104 (418)
T PF14727_consen 36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSV 104 (418)
T ss_pred CccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEE
Confidence 34688999999999999985433 233333466776665432 223444445566666654
No 493
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=76.78 E-value=18 Score=23.48 Aligned_cols=68 Identities=9% Similarity=0.036 Sum_probs=44.6
Q ss_pred CEeEEEEeeCCCEEEEeeCCCcEEEEecC------CCc-eeEEEe------cCCCCeEEEEccCC-------------cE
Q psy6446 65 GIKHVQFFKNNTRLISCAEDKTVRLWDVS------ASA-EVQKLE------FGAVPNSLEISRDG-------------TT 118 (134)
Q Consensus 65 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~------~~~-~~~~~~------~~~~v~~~~~~~~~-------------~~ 118 (134)
.-..++++|.+.+.++...-+...+||.. ..+ ..-.++ .....+.+.|+... .+
T Consensus 24 N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~F 103 (336)
T TIGR03118 24 NAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRF 103 (336)
T ss_pred ccceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeE
Confidence 34788999988888888888889999985 121 122222 12345666666322 24
Q ss_pred EEEecCCeEEEEeC
Q psy6446 119 ITVTHGSCVTFLDA 132 (134)
Q Consensus 119 l~~~~~~~i~i~d~ 132 (134)
|.++++|+|.-|..
T Consensus 104 if~tEdGTisaW~p 117 (336)
T TIGR03118 104 LFVTEDGTLSGWAP 117 (336)
T ss_pred EEEeCCceEEeecC
Confidence 66778899998873
No 494
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=76.61 E-value=28 Score=25.65 Aligned_cols=63 Identities=17% Similarity=0.083 Sum_probs=42.9
Q ss_pred EEEccCCcEEEEecCCCeEEEEECCCCCCCCeE----Ee--------------CCCCCEeEEEEeeCCCEEEEeeCCCcE
Q psy6446 26 VHFATDSYRLATGSNDKNIRIYDLNKPDAEPTV----YR--------------GHSSGIKHVQFFKNNTRLISCAEDKTV 87 (134)
Q Consensus 26 ~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~----~~--------------~~~~~v~~~~~~~~~~~l~~~~~d~~i 87 (134)
+.-...+..++....||.|.++|..+.+..... .. ..-.....++|||.+..++.-..++.+
T Consensus 265 i~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~~~~~~~ 344 (753)
T PF11635_consen 265 ITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQIDEDGKT 344 (753)
T ss_pred EEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEEecCCCc
Confidence 666667778999999999999998765322111 00 011134457899998888888888875
Q ss_pred E
Q psy6446 88 R 88 (134)
Q Consensus 88 ~ 88 (134)
.
T Consensus 345 ~ 345 (753)
T PF11635_consen 345 K 345 (753)
T ss_pred e
Confidence 5
No 495
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=76.36 E-value=18 Score=23.42 Aligned_cols=49 Identities=12% Similarity=0.150 Sum_probs=32.0
Q ss_pred CEeEEEEeeCCCEEEEeeCCCcEEEEecCCCce---eEEEe-----cCCCCeEEEEccC
Q psy6446 65 GIKHVQFFKNNTRLISCAEDKTVRLWDVSASAE---VQKLE-----FGAVPNSLEISRD 115 (134)
Q Consensus 65 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~---~~~~~-----~~~~v~~~~~~~~ 115 (134)
....|+|.|+++.+++ ...|.|.+++ ..+.. +..+. .......++++|+
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~ 59 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPD 59 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TT
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccc
Confidence 4578999999877665 5599999998 44443 22221 1234578999994
No 496
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=76.02 E-value=18 Score=23.17 Aligned_cols=65 Identities=9% Similarity=0.049 Sum_probs=33.2
Q ss_pred CCcEEEEecC-----CCeEEEEECCCCCCCCeEEeC--CCCCEeEEEEeeCCCEEEEeeCCC----cEEEEecCCCce
Q psy6446 31 DSYRLATGSN-----DKNIRIYDLNKPDAEPTVYRG--HSSGIKHVQFFKNNTRLISCAEDK----TVRLWDVSASAE 97 (134)
Q Consensus 31 ~~~~l~~~~~-----d~~v~i~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~----~i~~~d~~~~~~ 97 (134)
+++..+.|+. ...+..||+.+..- ..+.. ............+++..+.|+.++ .+..||+.+.+.
T Consensus 123 ~~~iYv~GG~~~~~~~~~v~~yd~~~~~W--~~~~~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W 198 (323)
T TIGR03548 123 DGTLYVGGGNRNGKPSNKSYLFNLETQEW--FELPDFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQW 198 (323)
T ss_pred CCEEEEEeCcCCCccCceEEEEcCCCCCe--eECCCCCCCCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCee
Confidence 5666666664 23577888775431 11111 011112222334666667776653 356788876554
No 497
>KOG1900|consensus
Probab=75.99 E-value=36 Score=26.70 Aligned_cols=129 Identities=11% Similarity=0.163 Sum_probs=68.2
Q ss_pred eeEeecCCCceeeEEeeCCC-ceeeEEEccCC-------cEEEEecCCCeEEEEECCCCC--CCCeEE------eCCCCC
Q psy6446 2 GTVWDAVSGEELHSFQHPHI-VKSSVHFATDS-------YRLATGSNDKNIRIYDLNKPD--AEPTVY------RGHSSG 65 (134)
Q Consensus 2 i~v~d~~~~~~~~~~~~~~~-~~~~~~~~~~~-------~~l~~~~~d~~v~i~~~~~~~--~~~~~~------~~~~~~ 65 (134)
+.+|+..++.....+.+... +....-+.|.. ++++.-..--.+.++-+.-.. .....+ ....-.
T Consensus 101 L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~~dg~~ 180 (1311)
T KOG1900|consen 101 LFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKISVDGVS 180 (1311)
T ss_pred EEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeeecCCce
Confidence 67999998777777763333 33322233322 333333333455555432211 111111 123456
Q ss_pred EeEEEEeeCCCEEEEeeCCCcEEEEecC----CC---c-ee----------------EEE--ecCCCCeEEEEccCCcEE
Q psy6446 66 IKHVQFFKNNTRLISCAEDKTVRLWDVS----AS---A-EV----------------QKL--EFGAVPNSLEISRDGTTI 119 (134)
Q Consensus 66 v~~~~~~~~~~~l~~~~~d~~i~~~d~~----~~---~-~~----------------~~~--~~~~~v~~~~~~~~~~~l 119 (134)
|.++....+|+.+++|..+ .+|.+. .+ + +- ..+ ....+|..+..+.....+
T Consensus 181 V~~I~~t~nGRIF~~G~dg---~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR~Il 257 (1311)
T KOG1900|consen 181 VNCITYTENGRIFFAGRDG---NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSRNIL 257 (1311)
T ss_pred EEEEEeccCCcEEEeecCC---CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEecccccee
Confidence 7888877788877765544 344331 10 1 10 001 124577888887665555
Q ss_pred EE-ecCCeEEEEeCC
Q psy6446 120 TV-THGSCVTFLDAN 133 (134)
Q Consensus 120 ~~-~~~~~i~i~d~~ 133 (134)
.. +..|.|.+||+.
T Consensus 258 Y~lsek~~v~~Y~i~ 272 (1311)
T KOG1900|consen 258 YVLSEKGTVSAYDIG 272 (1311)
T ss_pred eeeccCceEEEEEcc
Confidence 54 567999999975
No 498
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=74.17 E-value=21 Score=23.21 Aligned_cols=83 Identities=11% Similarity=0.015 Sum_probs=54.5
Q ss_pred CCcEEEEecCCCeEEEEECCCCCCCCeEEeCCCCCEeEEEEeeCCCEEEEeeC----C----------------CcEEEE
Q psy6446 31 DSYRLATGSNDKNIRIYDLNKPDAEPTVYRGHSSGIKHVQFFKNNTRLISCAE----D----------------KTVRLW 90 (134)
Q Consensus 31 ~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d----------------~~i~~~ 90 (134)
+|++-++-+..|.+.-+|.+++.... ...-.+....++|. |++++.+-. + .-+.+.
T Consensus 212 dgrLwvldsgtGev~~vD~~~G~~e~--Va~vpG~~rGL~f~--G~llvVgmSk~R~~~~f~glpl~~~l~~~~CGv~vi 287 (335)
T TIGR03032 212 QGKLWLLNSGRGELGYVDPQAGKFQP--VAFLPGFTRGLAFA--GDFAFVGLSKLRESRVFGGLPIEERLDALGCGVAVI 287 (335)
T ss_pred CCeEEEEECCCCEEEEEcCCCCcEEE--EEECCCCCccccee--CCEEEEEeccccCCCCcCCCchhhhhhhhcccEEEE
Confidence 56777777778888888887654322 22334566777776 666654322 1 236788
Q ss_pred ecCCCceeEEEecCC---CCeEEEEccCCc
Q psy6446 91 DVSASAEVQKLEFGA---VPNSLEISRDGT 117 (134)
Q Consensus 91 d~~~~~~~~~~~~~~---~v~~~~~~~~~~ 117 (134)
|+++|..+..+..++ ++..++.-|.-+
T Consensus 288 dl~tG~vv~~l~feg~v~EifdV~vLPg~r 317 (335)
T TIGR03032 288 DLNSGDVVHWLRFEGVIEEIYDVAVLPGVR 317 (335)
T ss_pred ECCCCCEEEEEEeCCceeEEEEEEEecCCC
Confidence 999999888877654 456777777643
No 499
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=72.66 E-value=28 Score=23.95 Aligned_cols=38 Identities=13% Similarity=0.137 Sum_probs=25.3
Q ss_pred CEeEEEEee-CCCEEEEeeCCCcEEEEecCCCceeEEEe
Q psy6446 65 GIKHVQFFK-NNTRLISCAEDKTVRLWDVSASAEVQKLE 102 (134)
Q Consensus 65 ~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 102 (134)
.++++.+.+ ++..++++-....|...|.++++....+.
T Consensus 272 H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg 310 (477)
T PF05935_consen 272 HINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWILG 310 (477)
T ss_dssp -EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEES
T ss_pred ccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEeC
Confidence 478999998 55555555556688899988888776665
No 500
>KOG3522|consensus
Probab=70.74 E-value=21 Score=26.49 Aligned_cols=67 Identities=10% Similarity=0.139 Sum_probs=44.7
Q ss_pred CCEeEEEEeeCCCEEEEeeCCCcEEEEecCCCceeEEEe----cCCCCeEEEEccCCcEEEEecCCeEEEEeCC
Q psy6446 64 SGIKHVQFFKNNTRLISCAEDKTVRLWDVSASAEVQKLE----FGAVPNSLEISRDGTTITVTHGSCVTFLDAN 133 (134)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~ 133 (134)
.+|...++.. -.+-++.+|.+.++...+......+. +...|+++....++-+++......+++++.+
T Consensus 627 lPvrsla~~e---d~~was~gG~V~vi~~tt~~~~~~leahqee~~~Vthm~~~~~gVwvafasG~~~rlfhte 697 (925)
T KOG3522|consen 627 LPVRSLAFQE---DFVWASEGGCVHVIPSTTFIRSWDLEAHQEEAHSVTHMLYLDNGVWVAFASGDEERLFHTE 697 (925)
T ss_pred ccccchhhhh---ceeeeecCCceEEEechhccccchhHHHHhhcceEEEEEeeCCceEEEEcCCCEEEEeccc
Confidence 3455555532 24456778899999887655544433 4567889998888888887766666666554
Done!